Your job contains 1 sequence.
>040811
ESWTDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTIAHVPPP
RPKRKAAHPYPQKASKNVLPPLQAAMAYPSVNALAHGFAAWDDASMLVNAEKMMPSQDKY
TNLHAIEADDIGSKGISGIGNSTVGGIGSSTRTQPSTDMPKQGNQVPVLHGIPDFAEVYS
FIGSVFDPDTKGHVQKLKEMDPINFETVLLLMRNLSLNLSSPDFEPIRNVLSSYDAKSKT
VGVAAGIVANNQTNDIAC
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 040811
(258 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2075049 - symbol:RVE8 "REVEILLE 8" species:370... 659 1.1e-64 1
TAIR|locus:2151251 - symbol:LCL1 "LHY/CCA1-like 1" specie... 585 7.5e-57 1
TAIR|locus:2149589 - symbol:AT5G52660 species:3702 "Arabi... 445 5.2e-42 1
TAIR|locus:2124928 - symbol:AT4G01280 species:3702 "Arabi... 420 2.3e-39 1
TAIR|locus:2025411 - symbol:ASG4 "ALTERED SEED GERMINATIO... 415 7.8e-39 1
DICTYBASE|DDB_G0288783 - symbol:mybG "myb domain-containi... 253 1.1e-25 2
TAIR|locus:2167210 - symbol:RVE1 "REVEILLE 1" species:370... 192 1.3e-14 1
TAIR|locus:2169135 - symbol:RVE2 "REVEILLE 2" species:370... 180 8.0e-14 1
TAIR|locus:2200970 - symbol:LHY "LATE ELONGATED HYPOCOTYL... 184 2.8e-13 1
TAIR|locus:2044345 - symbol:CCA1 "circadian clock associa... 182 4.1e-13 1
TAIR|locus:504955668 - symbol:AT3G10113 species:3702 "Ara... 174 8.1e-13 1
DICTYBASE|DDB_G0277927 - symbol:mybH "SWIRM domain-contai... 162 8.3e-13 2
TAIR|locus:2014114 - symbol:EPR1 "EARLY-PHYTOCHROME-RESPO... 174 1.1e-12 1
DICTYBASE|DDB_G0274463 - symbol:mybJ "myb domain-containi... 140 5.1e-07 1
TAIR|locus:2042872 - symbol:AT2G38090 species:3702 "Arabi... 125 7.9e-06 1
TAIR|locus:2166459 - symbol:AT5G05790 species:3702 "Arabi... 124 8.7e-06 1
TAIR|locus:2011216 - symbol:AT1G19000 species:3702 "Arabi... 121 2.2e-05 1
DICTYBASE|DDB_G0289151 - symbol:mybI "myb domain-containi... 128 3.0e-05 2
TAIR|locus:2027181 - symbol:AT1G74840 species:3702 "Arabi... 119 3.2e-05 1
TAIR|locus:2150149 - symbol:AT5G01200 species:3702 "Arabi... 119 3.2e-05 1
UNIPROTKB|J9P785 - symbol:MYSM1 "Uncharacterized protein"... 121 3.5e-05 1
TAIR|locus:2133667 - symbol:AT4G09450 species:3702 "Arabi... 115 4.0e-05 1
UNIPROTKB|Q5VVJ2 - symbol:MYSM1 "Histone H2A deubiquitina... 125 4.0e-05 1
TAIR|locus:2028461 - symbol:AT1G49010 species:3702 "Arabi... 119 4.7e-05 1
TAIR|locus:2075775 - symbol:AT3G10580 species:3702 "Arabi... 118 5.2e-05 1
TAIR|locus:2151621 - symbol:AT5G61620 species:3702 "Arabi... 118 6.4e-05 1
TAIR|locus:2154508 - symbol:AT5G58900 species:3702 "Arabi... 117 6.8e-05 1
UNIPROTKB|Q8S9H7 - symbol:DIVARICATA "Transcription facto... 117 7.9e-05 1
UNIPROTKB|F1NJR7 - symbol:MYSM1 "Histone H2A deubiquitina... 122 9.2e-05 1
UNIPROTKB|F1NCM9 - symbol:MYSM1 "Histone H2A deubiquitina... 122 9.2e-05 1
TAIR|locus:2074723 - symbol:AT3G11280 species:3702 "Arabi... 115 9.7e-05 1
UNIPROTKB|F1PLC7 - symbol:MYSM1 "Uncharacterized protein"... 121 0.00012 1
UNIPROTKB|Q5F3F2 - symbol:MYSM1 "Histone H2A deubiquitina... 119 0.00021 1
TAIR|locus:2094942 - symbol:AT3G16350 species:3702 "Arabi... 115 0.00021 1
TAIR|locus:2020653 - symbol:AT1G70000 species:3702 "Arabi... 112 0.00022 1
TAIR|locus:2171519 - symbol:AT5G47390 species:3702 "Arabi... 114 0.00025 1
UNIPROTKB|F1S7A6 - symbol:MYSM1 "Uncharacterized protein"... 118 0.00028 1
TAIR|locus:2159607 - symbol:AT5G08520 species:3702 "Arabi... 112 0.00029 1
TAIR|locus:2165106 - symbol:AT5G56840 species:3702 "Arabi... 109 0.00038 1
TAIR|locus:2175478 - symbol:AT5G04760 species:3702 "Arabi... 105 0.00090 1
>TAIR|locus:2075049 [details] [associations]
symbol:RVE8 "REVEILLE 8" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0009723
"response to ethylene stimulus" evidence=IEP;RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP;RCA] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP;RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP;RCA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0032922 "circadian
regulation of gene expression" evidence=IMP] [GO:0043966 "histone
H3 acetylation" evidence=IMP] [GO:0048573 "photoperiodism,
flowering" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0048574 "long-day photoperiodism, flowering"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0009737 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0003677 GO:GO:0009651 GO:GO:0003700 GO:GO:0003682
GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739
GO:GO:0032922 GO:GO:0048573 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237512
GO:GO:0043966 ProtClustDB:CLSN2689417 EMBL:AY091106 EMBL:AY122969
IPI:IPI00517009 RefSeq:NP_187571.2 UniGene:At.40072
ProteinModelPortal:Q8RWU3 SMR:Q8RWU3 STRING:Q8RWU3 PRIDE:Q8RWU3
EnsemblPlants:AT3G09600.1 GeneID:820117 KEGG:ath:AT3G09600
TAIR:At3g09600 InParanoid:Q8RWU3 OMA:RVISPQH PhylomeDB:Q8RWU3
Genevestigator:Q8RWU3 Uniprot:Q8RWU3
Length = 298
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 138/256 (53%), Positives = 168/256 (65%)
Query: 1 ESWTDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTIAHVXXX 60
ESWT+EEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGT+AHV
Sbjct: 44 ESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTLAHVPPP 103
Query: 61 XXXXXXXXXXXQKASKNVLPPLQAAMAYPSV-NALAHGFAAWDDASMLVNAEKMMPSQDK 119
QKASKN PLQ + ++ + N G+A+WDDASML+N +++ Q +
Sbjct: 104 RPKRKAAHPYPQKASKNAQMPLQVSTSFTTTRNGDMPGYASWDDASMLLN--RVISPQHE 161
Query: 120 YTNLHAIEADDXXXXXXXXXXXXTVGGIGSSTRTQPSTDMPKQGNQVPVLHGIPDFAEVY 179
L EAD T G+GSS+RT +++ ++ Q PVLHG+PDFAEVY
Sbjct: 162 LATLRGAEADIGSKGLLNVSSPST-SGMGSSSRTVSGSEIVRKAKQPPVLHGVPDFAEVY 220
Query: 180 SFIGSVFDPDTKGHVQKLKEMDPINFETVXXXXXXXXXXXXXPDFEPIRNVLSSYDAKSK 239
+FIGSVFDP+T+GHV+KLKEMDPINFETV PD E R VL SYD +
Sbjct: 221 NFIGSVFDPETRGHVEKLKEMDPINFETVLLLMRNLTVNLSNPDLESTRKVLLSYDNVTT 280
Query: 240 TVGVAAGIVANNQTND 255
+ +V N+ T+D
Sbjct: 281 ELPSVVSLVKNS-TSD 295
>TAIR|locus:2151251 [details] [associations]
symbol:LCL1 "LHY/CCA1-like 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0009723
"response to ethylene stimulus" evidence=IEP;RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP;RCA] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP;RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP;RCA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0007623 "circadian
rhythm" evidence=IMP] [GO:0048573 "photoperiodism, flowering"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0009737 GO:GO:0005634 EMBL:CP002688
GO:GO:0046686 GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0003677 GO:GO:0007623 GO:GO:0009651 GO:GO:0003700
GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009739 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237512
EMBL:AY519514 EMBL:AJ937209 IPI:IPI00528959 RefSeq:NP_568108.1
RefSeq:NP_850756.1 UniGene:At.20108 ProteinModelPortal:Q6R0G4
SMR:Q6R0G4 STRING:Q6R0G4 EnsemblPlants:AT5G02840.1
EnsemblPlants:AT5G02840.2 GeneID:831766 KEGG:ath:AT5G02840
TAIR:At5g02840 eggNOG:NOG319149 InParanoid:Q6R0G4 OMA:AYTITKS
PhylomeDB:Q6R0G4 ProtClustDB:CLSN2689417 Genevestigator:Q6R0G4
Uniprot:Q6R0G4
Length = 293
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 124/230 (53%), Positives = 147/230 (63%)
Query: 1 ESWTDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTIAHVXXX 60
ESWT+ EHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGT+AHV
Sbjct: 49 ESWTEGEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTLAHVPPP 108
Query: 61 XXXXXXXXXXXQKASKNVLPPLQAAMAYPS-VNALAHGFAAWDD-ASMLVN--AEKMMPS 116
QKASKN L +M++P+ +N L G+ WDD S L+N ++P
Sbjct: 109 RPKRKAAHPYPQKASKNAQMSLHVSMSFPTQINNLP-GYTPWDDDTSALLNIAVSGVIPP 167
Query: 117 QDKYTNLHAIEADDXXXXXXXXXXXXTVGGIGSSTRTQPSTDMPKQGNQVPVLHGIPDFA 176
+D+ L E D + GIGSS+RT + + Q P +HG+PDFA
Sbjct: 168 EDELDTLCGAEVD-VGSNDMISETSPSASGIGSSSRTLSDSKGLRLAKQAPSMHGLPDFA 226
Query: 177 EVYSFIGSVFDPDTKGHVQKLKEMDPINFETVXXXXXXXXXXXXXPDFEP 226
EVY+FIGSVFDPD+KG ++KLKEMDPINFETV PDFEP
Sbjct: 227 EVYNFIGSVFDPDSKGRMKKLKEMDPINFETVLLLMRNLTVNLSNPDFEP 276
>TAIR|locus:2149589 [details] [associations]
symbol:AT5G52660 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0009723
"response to ethylene stimulus" evidence=IEP] [GO:0009737 "response
to abscisic acid stimulus" evidence=IEP] [GO:0009739 "response to
gibberellin stimulus" evidence=IEP] [GO:0009751 "response to
salicylic acid stimulus" evidence=IEP] [GO:0009753 "response to
jasmonic acid stimulus" evidence=IEP] [GO:0046686 "response to
cadmium ion" evidence=IEP] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0009737 EMBL:CP002688
GO:GO:0046686 GO:GO:0009753 GO:GO:0009723 GO:GO:0003677
GO:GO:0009651 GO:GO:0003700 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
HOGENOM:HOG000237512 eggNOG:NOG279643 EMBL:BT002002 EMBL:AY550303
EMBL:BT025882 IPI:IPI00536078 RefSeq:NP_568776.2 UniGene:At.29606
UniGene:At.67328 ProteinModelPortal:Q8H0W3 SMR:Q8H0W3
EnsemblPlants:AT5G52660.2 GeneID:835343 KEGG:ath:AT5G52660
TAIR:At5g52660 InParanoid:Q8H0W3 OMA:STSEPND PhylomeDB:Q8H0W3
ProtClustDB:CLSN2680521 ArrayExpress:Q8H0W3 Genevestigator:Q8H0W3
Uniprot:Q8H0W3
Length = 331
Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
Identities = 109/250 (43%), Positives = 134/250 (53%)
Query: 1 ESWTDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTIAHVXXX 60
ESWT+ EHDKFLEALQLFDRDWKKIE F+GSKTVIQIRSHAQKYFLKVQK+GT H+
Sbjct: 73 ESWTEPEHDKFLEALQLFDRDWKKIEAFIGSKTVIQIRSHAQKYFLKVQKSGTGEHLPPP 132
Query: 61 XXXXXXXXXXXQKASKNVLPPLQAAMAYPSV---NALAHGFAAWDDASMLVNAEKMMPSQ 117
QKA KNV LQ ++ S N + F + +SML+ + +
Sbjct: 133 RPKRKAAHPYPQKAHKNV--QLQVPGSFKSTSEPNDPSFMFRP-ESSSMLMTSPTTAAAA 189
Query: 118 DKYTNLHAIEADDXXXXXXXXXXXXTVGGIGSSTRTQPSTDMPKQGNQVPVLHGIPDFAE 177
N I + ++ R + + D GN L +PDFA+
Sbjct: 190 PWTNNAQTISFTPLPKAGAGANNNCSSSS-ENTPRPRSNRDARDHGNVGHSLRVLPDFAQ 248
Query: 178 VYSFIGSVFDPDTKGHVQKLKEMDPINFETVXXXXXXXXXXXXXPDFEPIRNVLSSYDAK 237
VY FIGSVFDP H+QKLK+MDPI+ ETV PDFE R +LSSYD
Sbjct: 249 VYGFIGSVFDPYASNHLQKLKKMDPIDVETVLLLMRNLSINLSSPDFEDHRRLLSSYDIG 308
Query: 238 SKTVGVAAGI 247
S+T G+
Sbjct: 309 SETATDHGGV 318
>TAIR|locus:2124928 [details] [associations]
symbol:AT4G01280 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0009723
"response to ethylene stimulus" evidence=IEP;RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP;RCA] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP;RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP;RCA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0000303 "response
to superoxide" evidence=RCA] [GO:0009736 "cytokinin mediated
signaling pathway" evidence=RCA] [GO:0009873 "ethylene mediated
signaling pathway" evidence=RCA] [GO:0048573 "photoperiodism,
flowering" evidence=RCA] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0009737 GO:GO:0046686
EMBL:CP002687 GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0003677 GO:GO:0009651 GO:GO:0003700 GO:GO:0003682
GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 HOGENOM:HOG000237512 ProtClustDB:CLSN2682863
EMBL:AB493668 IPI:IPI00656826 RefSeq:NP_001031568.1
UniGene:At.44234 ProteinModelPortal:C0SVG5 SMR:C0SVG5
EnsemblPlants:AT4G01280.2 GeneID:827903 KEGG:ath:AT4G01280
TAIR:At4g01280 eggNOG:NOG272389 OMA:KSGANEH PhylomeDB:C0SVG5
Genevestigator:C0SVG5 Uniprot:C0SVG5
Length = 303
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 104/247 (42%), Positives = 130/247 (52%)
Query: 1 ESWTDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTIAHVXXX 60
E+WTD+EHDKFLEAL LFDRDWKKIE FVGSKTV+QIRSHAQKYFLKVQK+G H+
Sbjct: 60 ENWTDQEHDKFLEALHLFDRDWKKIEAFVGSKTVVQIRSHAQKYFLKVQKSGANEHLPPP 119
Query: 61 XXXXXXXXXXXQKASKNVL-PPLQAAMAYPSVNALAHGFAAWDDASMLVNAEKMMPSQD- 118
KA KNV L ++ P L G+ D+ L+ + + S
Sbjct: 120 RPKRKASHPYPIKAPKNVAYTSLPSSSTLP---LLEPGYLYSSDSKSLMGNQAVCASTSS 176
Query: 119 ----KYTNLH--AIEADDXXXXXXXXXXXXTVGGIGSSTRTQPSTDMPKQGNQVPVLHGI 172
+ TNL IE ++ T + P H +
Sbjct: 177 SWNHESTNLPKPVIEVEEPGVSATAPLPNNRCRQ--EDTERVRAVTKPNNEESCEKPHRV 234
Query: 173 -PDFAEVYSFIGSVFDPDTKGHVQKLKEMDPINFETVXXXXXXXXXXXXXPDFEPIRNVL 231
P+FAEVYSFIGSVFDP+T GH+Q+LK+MDPIN ETV P+F R ++
Sbjct: 235 MPNFAEVYSFIGSVFDPNTSGHLQRLKQMDPINMETVLLLMQNLSVNLTSPEFAEQRRLI 294
Query: 232 SSYDAKS 238
SSY AK+
Sbjct: 295 SSYSAKA 301
>TAIR|locus:2025411 [details] [associations]
symbol:ASG4 "ALTERED SEED GERMINATION 4" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0009651 "response to salt stress" evidence=IEP]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:Y12776
EMBL:AC061957 GO:GO:0003677 GO:GO:0009651 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 EMBL:AY519508 EMBL:AJ937211 EMBL:BT029347
IPI:IPI00536561 RefSeq:NP_171659.1 UniGene:At.49839
ProteinModelPortal:Q6R0H0 SMR:Q6R0H0 IntAct:Q6R0H0
EnsemblPlants:AT1G01520.1 GeneID:839337 KEGG:ath:AT1G01520
TAIR:At1g01520 eggNOG:KOG0724 HOGENOM:HOG000237512
InParanoid:Q6R0H0 OMA:SHIMEQG PhylomeDB:Q6R0H0
ProtClustDB:CLSN2682863 Genevestigator:Q6R0H0 Uniprot:Q6R0H0
Length = 287
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 103/238 (43%), Positives = 126/238 (52%)
Query: 1 ESWTDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTIAHVXXX 60
E+WT++EHDKFLEAL LFDRDWKKI+ FVGSKTVIQIRSHAQKYFLKVQKNGT H+
Sbjct: 62 ENWTEQEHDKFLEALHLFDRDWKKIKAFVGSKTVIQIRSHAQKYFLKVQKNGTKEHLPPP 121
Query: 61 XXXXXXXXXXXQKASKNVLPPLQAAMAYPSV-NALAHGFAAWDDASMLVNAEKMMPSQDK 119
QKA K L A + + N +H + LV+ + +PS
Sbjct: 122 RPKRKANHPYPQKAPKFTLSSSNALFQHDYLYNTNSHPVISTTRKHGLVHCDVSIPSSVI 181
Query: 120 YTNLHAIEADDXXXXXXXXXXXXTVGGIGSSTRTQPSTDMPKQGNQVPVLHGI-PDFAEV 178
E V + T Q S P H + P+FAEV
Sbjct: 182 KEEFGVSENCCSTSSSRDKQRTRIV----TETNDQESCGKP---------HRVAPNFAEV 228
Query: 179 YSFIGSVFDPDTKGHVQKLKEMDPINFETVXXXXXXXXXXXXXPDFEPIRNVLSSYDA 236
Y+FIGSVFDP T GHV++LKEMDPIN ETV P+F+ R ++SSY+A
Sbjct: 229 YNFIGSVFDPKTTGHVKRLKEMDPINLETVLLLMKNLSVNLTSPEFDEQRKLISSYNA 286
>DICTYBASE|DDB_G0288783 [details] [associations]
symbol:mybG "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 dictyBase:DDB_G0288783 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GenomeReviews:CM000154_GR
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
EMBL:AAFI02000125 RefSeq:XP_636518.1 HSSP:Q5VVJ2
ProteinModelPortal:Q54IF9 PRIDE:Q54IF9 EnsemblProtists:DDB0220514
GeneID:8626803 KEGG:ddi:DDB_G0288783 eggNOG:NOG279643 OMA:NNTGERI
Uniprot:Q54IF9
Length = 423
Score = 253 (94.1 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 47/53 (88%), Positives = 49/53 (92%)
Query: 1 ESWTDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGT 53
E+WTDEEH KFLEAL LFDRDWKKIE FVGSKTVIQIRSHAQKYF+KVQKN T
Sbjct: 42 ENWTDEEHQKFLEALTLFDRDWKKIESFVGSKTVIQIRSHAQKYFIKVQKNNT 94
Score = 60 (26.2 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 15/60 (25%), Positives = 29/60 (48%)
Query: 149 SSTRTQPSTDMPKQGNQVPVLHGIPDFAEVYSFIGSVFDPDTKGHVQKLKEMDPINFETV 208
SS R P N L P+F ++Y+F+ ++F+ + + L ++ I+ ET+
Sbjct: 185 SSQRNGGLPPNPSSNNGGTTL--TPNFPKIYAFLSNLFESNGTSFTEALSDLSMIDRETM 242
>TAIR|locus:2167210 [details] [associations]
symbol:RVE1 "REVEILLE 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IMP] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0007623 "circadian rhythm" evidence=IEP;RCA] [GO:0009734 "auxin
mediated signaling pathway" evidence=IMP] [GO:0009851 "auxin
biosynthetic process" evidence=IMP] [GO:0010600 "regulation of
auxin biosynthetic process" evidence=IMP] [GO:0009651 "response to
salt stress" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA] [GO:0009739 "response to gibberellin stimulus"
evidence=RCA] [GO:0009751 "response to salicylic acid stimulus"
evidence=RCA] [GO:0009753 "response to jasmonic acid stimulus"
evidence=RCA] [GO:0048574 "long-day photoperiodism, flowering"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 EMBL:CP002688 GO:GO:0009734 GO:GO:0003677
GO:GO:0007623 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009851 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 GO:GO:0010600 IPI:IPI00524365
RefSeq:NP_568344.2 UniGene:At.21718 ProteinModelPortal:F4KGY6
SMR:F4KGY6 EnsemblPlants:AT5G17300.1 GeneID:831595
KEGG:ath:AT5G17300 OMA:TKERERW Uniprot:F4KGY6
Length = 387
Score = 192 (72.6 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 34/53 (64%), Positives = 43/53 (81%)
Query: 1 ESWTDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGT 53
E WTDEEH KF+EAL+L+ R W++IE+ VGSKT +QIRSHAQK+F KV + T
Sbjct: 56 ERWTDEEHKKFVEALKLYGRAWRRIEEHVGSKTAVQIRSHAQKFFSKVAREAT 108
>TAIR|locus:2169135 [details] [associations]
symbol:RVE2 "REVEILLE 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0009723
"response to ethylene stimulus" evidence=IEP;RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP;RCA] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP;RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP;RCA] [GO:0007623
"circadian rhythm" evidence=IEP;RCA] [GO:0009845 "seed germination"
evidence=IMP] [GO:0009909 "regulation of flower development"
evidence=IMP] [GO:0048574 "long-day photoperiodism, flowering"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0009737 EMBL:CP002688 GO:GO:0009733
GO:GO:0009753 GO:GO:0009723 GO:GO:0003677 GO:GO:0007623
GO:GO:0009651 GO:GO:0003700 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 GO:GO:0009845
GO:GO:0009909 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 IPI:IPI00528444
RefSeq:NP_198542.1 UniGene:At.30502 UniGene:At.68589
ProteinModelPortal:F4K5X6 SMR:F4K5X6 PRIDE:F4K5X6
EnsemblPlants:AT5G37260.1 GeneID:833700 KEGG:ath:AT5G37260
OMA:SSHTEES ArrayExpress:F4K5X6 Uniprot:F4K5X6
Length = 287
Score = 180 (68.4 bits), Expect = 8.0e-14, P = 8.0e-14
Identities = 30/51 (58%), Positives = 43/51 (84%)
Query: 1 ESWTDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKN 51
E WT+ EH+KF+EAL+L+ R W++IE+ VG+KT +QIRSHAQK+F KV ++
Sbjct: 37 EKWTEAEHEKFVEALKLYGRAWRRIEEHVGTKTAVQIRSHAQKFFTKVARD 87
>TAIR|locus:2200970 [details] [associations]
symbol:LHY "LATE ELONGATED HYPOCOTYL" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA;TAS] [GO:0009651 "response to salt stress"
evidence=IEP;RCA] [GO:0009723 "response to ethylene stimulus"
evidence=IEP;RCA] [GO:0009733 "response to auxin stimulus"
evidence=IEP;RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP;RCA] [GO:0009739 "response to gibberellin stimulus"
evidence=IEP;RCA] [GO:0009751 "response to salicylic acid stimulus"
evidence=IEP;RCA] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IEP;RCA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0048574 "long-day photoperiodism, flowering"
evidence=IGI;RCA] [GO:0042752 "regulation of circadian rhythm"
evidence=RCA;IMP] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0007623 "circadian rhythm"
evidence=IGI;RCA] [GO:0009409 "response to cold" evidence=IGI]
[GO:0042754 "negative regulation of circadian rhythm" evidence=IMP]
[GO:0009639 "response to red or far red light" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0046686 GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0007623 GO:GO:0009651 GO:GO:0009409 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0044212 GO:GO:0009739 GO:GO:0043433
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 GO:GO:0048574 HOGENOM:HOG000084594 GO:GO:0042754
EMBL:AC007323 EMBL:AJ006404 EMBL:AY519507 EMBL:AK316728
EMBL:AK316829 IPI:IPI00517620 RefSeq:NP_001030924.1
RefSeq:NP_171614.1 RefSeq:NP_849568.1 UniGene:At.25466
ProteinModelPortal:Q6R0H1 SMR:Q6R0H1 IntAct:Q6R0H1 STRING:Q6R0H1
PRIDE:Q6R0H1 EnsemblPlants:AT1G01060.1 EnsemblPlants:AT1G01060.2
EnsemblPlants:AT1G01060.3 GeneID:839341 KEGG:ath:AT1G01060
GeneFarm:1653 TAIR:At1g01060 eggNOG:NOG269073 InParanoid:Q6R0H1
KO:K12133 OMA:QKFFTKL PhylomeDB:Q6R0H1 ProtClustDB:CLSN2682827
Uniprot:Q6R0H1
Length = 645
Score = 184 (69.8 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 29/54 (53%), Positives = 45/54 (83%)
Query: 1 ESWTDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTI 54
E WT++EH++FLEAL+L+ R W++IE+ +G+KT +QIRSHAQK+F K++K +
Sbjct: 25 ERWTEDEHERFLEALRLYGRAWQRIEEHIGTKTAVQIRSHAQKFFTKLEKEAEV 78
>TAIR|locus:2044345 [details] [associations]
symbol:CCA1 "circadian clock associated 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0009723
"response to ethylene stimulus" evidence=IEP;RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP;RCA] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP;RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP;RCA] [GO:0046686
"response to cadmium ion" evidence=IEP] [GO:0010243 "response to
organic nitrogen" evidence=IEP] [GO:0048574 "long-day
photoperiodism, flowering" evidence=IGI;RCA] [GO:0007623 "circadian
rhythm" evidence=IEP;IGI;RCA;IMP;TAS] [GO:0019904 "protein domain
specific binding" evidence=ISS] [GO:0043496 "regulation of protein
homodimerization activity" evidence=IMP] [GO:0009409 "response to
cold" evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0042754 "negative regulation of circadian rhythm"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009639 "response to red or far
red light" evidence=RCA] [GO:0010264 "myo-inositol hexakisphosphate
biosynthetic process" evidence=RCA] [GO:0042752 "regulation of
circadian rhythm" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 GO:GO:0009737
GO:GO:0005634 GO:GO:0046686 GO:GO:0045892 GO:GO:0045893
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733 GO:GO:0009753
GO:GO:0009723 GO:GO:0007623 GO:GO:0009651 GO:GO:0009409
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739
GO:GO:0010243 GO:GO:0043496 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC005310 GO:GO:0048574
EMBL:U28422 EMBL:U79156 EMBL:AY519511 EMBL:BT001096 EMBL:BT001105
IPI:IPI00522826 IPI:IPI00545715 PIR:T02684 RefSeq:NP_850460.1
RefSeq:NP_850461.1 UniGene:At.10956 ProteinModelPortal:P92973
SMR:P92973 IntAct:P92973 STRING:P92973 PRIDE:P92973
EnsemblPlants:AT2G46830.1 GeneID:819296 KEGG:ath:AT2G46830
GeneFarm:1652 TAIR:At2g46830 eggNOG:NOG310744 HOGENOM:HOG000084594
InParanoid:P92973 KO:K12134 OMA:HPEMANE PhylomeDB:P92973
ProtClustDB:CLSN2918288 GO:GO:0042754 Uniprot:P92973
Length = 608
Score = 182 (69.1 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 31/50 (62%), Positives = 43/50 (86%)
Query: 1 ESWTDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQK 50
E WT+EEH++F+EAL+L+ R W+KIE+ V +KT +QIRSHAQK+F KV+K
Sbjct: 25 ERWTEEEHNRFIEALRLYGRAWQKIEEHVATKTAVQIRSHAQKFFSKVEK 74
>TAIR|locus:504955668 [details] [associations]
symbol:AT3G10113 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002686 GO:GO:0006355 GO:GO:0003677 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
UniGene:At.27131 IPI:IPI00534114 RefSeq:NP_683543.1
UniGene:At.53244 ProteinModelPortal:F4J2J6 SMR:F4J2J6
EnsemblPlants:AT3G10113.1 GeneID:820173 KEGG:ath:AT3G10113
PhylomeDB:F4J2J6 Uniprot:F4J2J6
Length = 336
Score = 174 (66.3 bits), Expect = 8.1e-13, P = 8.1e-13
Identities = 27/48 (56%), Positives = 42/48 (87%)
Query: 1 ESWTDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKV 48
E W++EEHD+FLEA++L+ R W++I++ +G+KT +QIRSHAQK+F K+
Sbjct: 66 EKWSEEEHDRFLEAIKLYGRGWRQIQEHIGTKTAVQIRSHAQKFFSKM 113
>DICTYBASE|DDB_G0277927 [details] [associations]
symbol:mybH "SWIRM domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000555
InterPro:IPR001005 InterPro:IPR007526 InterPro:IPR009057
Pfam:PF00249 Pfam:PF01398 Pfam:PF04433 PROSITE:PS50934
SMART:SM00232 SMART:SM00717 dictyBase:DDB_G0277927 GO:GO:0005634
GO:GO:0006355 GenomeReviews:CM000152_GR GO:GO:0003677
EMBL:AAFI02000023 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 eggNOG:NOG329351 HSSP:Q5VVJ2 RefSeq:XP_642011.1
ProteinModelPortal:Q54Z40 MEROPS:M67.A12 EnsemblProtists:DDB0220617
GeneID:8621224 KEGG:ddi:DDB_G0277927 KO:K11865 OMA:PIQQSPI
Uniprot:Q54Z40
Length = 1217
Score = 162 (62.1 bits), Expect = 8.3e-13, Sum P(2) = 8.3e-13
Identities = 29/51 (56%), Positives = 42/51 (82%)
Query: 2 SWTDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNG 52
SWT EE F+EA +L+D+D KKI++ V +KT++Q+RSHAQK+ LK++KNG
Sbjct: 152 SWTKEEERLFVEAYKLYDKDNKKIQEHVKTKTILQVRSHAQKFALKLEKNG 202
Score = 121 (47.7 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 22/52 (42%), Positives = 38/52 (73%)
Query: 3 WTDEEHDKFLEALQLFDR-DWKKIEDFVGSKTVIQIRSHAQKYFLKV-QKNG 52
W++EEH+ FL+A++ + R +WK I + S+ +QI++HA+ YF K+ Q+NG
Sbjct: 232 WSNEEHELFLKAIEKYGRGNWKLISTLIKSRNTLQIKNHARIYFDKISQQNG 283
Score = 48 (22.0 bits), Expect = 8.3e-13, Sum P(2) = 8.3e-13
Identities = 17/52 (32%), Positives = 23/52 (44%)
Query: 154 QPST-DMPKQGNQVPVLHGIPDFAEVYSFIGSVFDPDTKGHVQKLKEMDPIN 204
QP T D+ V +H EV +G F+PDT H+ L + P N
Sbjct: 774 QPFTIDVSSNTMIVMDIHSHISSTEVIGMLGGKFNPDTN-HITILLAI-PCN 823
>TAIR|locus:2014114 [details] [associations]
symbol:EPR1 "EARLY-PHYTOCHROME-RESPONSIVE1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009651 "response to salt stress" evidence=IEP]
[GO:0009723 "response to ethylene stimulus" evidence=IEP]
[GO:0046686 "response to cadmium ion" evidence=IEP] [GO:0007623
"circadian rhythm" evidence=IEP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 EMBL:CP002684
GO:GO:0046686 GO:GO:0009723 GO:GO:0003677 GO:GO:0007623
GO:GO:0009651 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:AC013354 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 IPI:IPI00891668
RefSeq:NP_001117304.1 UniGene:At.27131 ProteinModelPortal:B3H5A8
SMR:B3H5A8 EnsemblPlants:AT1G18330.2 GeneID:838413
KEGG:ath:AT1G18330 TAIR:At1g18330 eggNOG:NOG263004
HOGENOM:HOG000064617 OMA:NSCTSDI PhylomeDB:B3H5A8
ProtClustDB:CLSN2682175 Genevestigator:B3H5A8 Uniprot:B3H5A8
Length = 372
Score = 174 (66.3 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 27/48 (56%), Positives = 42/48 (87%)
Query: 1 ESWTDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKV 48
E W++EEHD+FLEA++L+ R W++I++ +G+KT +QIRSHAQK+F K+
Sbjct: 77 EKWSEEEHDRFLEAIKLYGRGWRQIQEHIGTKTAVQIRSHAQKFFSKM 124
>DICTYBASE|DDB_G0274463 [details] [associations]
symbol:mybJ "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
dictyBase:DDB_G0274463 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GenomeReviews:CM000151_GR GO:GO:0006351 GO:GO:0003682
EMBL:AAFI02000012 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 RefSeq:XP_644160.1 ProteinModelPortal:Q869R9
EnsemblProtists:DDB0220506 GeneID:8619589 KEGG:ddi:DDB_G0274463
eggNOG:NOG264937 OMA:KGAWKEI Uniprot:Q869R9
Length = 734
Score = 140 (54.3 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 27/54 (50%), Positives = 38/54 (70%)
Query: 1 ESWTDEEHDKFLEALQLFDRD-WKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGT 53
+ WT EEH +FL +Q+ + WK+I FVG++T QI+SHAQKY+L+ QK T
Sbjct: 377 QGWTKEEHIRFLNGIQIHGKGAWKEIAQFVGTRTPTQIQSHAQKYYLR-QKQET 429
>TAIR|locus:2042872 [details] [associations]
symbol:AT2G38090 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002685 GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:BT006122 EMBL:AY519529
EMBL:AK118135 IPI:IPI00542058 RefSeq:NP_181344.2 UniGene:At.46819
ProteinModelPortal:Q8GXN7 SMR:Q8GXN7 EnsemblPlants:AT2G38090.1
GeneID:818387 KEGG:ath:AT2G38090 TAIR:At2g38090
HOGENOM:HOG000237920 InParanoid:Q8GXN7 OMA:HRQFLMG PhylomeDB:Q8GXN7
ProtClustDB:CLSN2918198 Genevestigator:Q8GXN7 Uniprot:Q8GXN7
Length = 298
Score = 125 (49.1 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 25/52 (48%), Positives = 37/52 (71%)
Query: 3 WTDEEHDKFLEALQLFDR-DWKKI-EDFVGSKTVIQIRSHAQKYFLKVQKNG 52
WT+EEH +FL L+ + + DW+ I +FV ++T Q+ SHAQKYF++ Q NG
Sbjct: 143 WTEEEHRQFLMGLKKYGKGDWRNIARNFVTTRTPTQVASHAQKYFIR-QVNG 193
>TAIR|locus:2166459 [details] [associations]
symbol:AT5G05790 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB005237
HOGENOM:HOG000237920 ProtClustDB:CLSN2684400 EMBL:AY519531
EMBL:BT026054 IPI:IPI00544524 RefSeq:NP_196198.1 UniGene:At.32952
ProteinModelPortal:Q9FFJ9 SMR:Q9FFJ9 EnsemblPlants:AT5G05790.1
GeneID:830464 KEGG:ath:AT5G05790 TAIR:At5g05790 eggNOG:NOG242423
InParanoid:Q9FFJ9 OMA:ISRNFVG PhylomeDB:Q9FFJ9 ArrayExpress:Q9FFJ9
Genevestigator:Q9FFJ9 Uniprot:Q9FFJ9
Length = 277
Score = 124 (48.7 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 26/52 (50%), Positives = 36/52 (69%)
Query: 3 WTDEEHDKFLEALQLFDR-DWKKIE-DFVGSKTVIQIRSHAQKYFLKVQKNG 52
WT+EEH +FL L + + DW+ I +FVGSKT Q+ SHAQKY+ + Q +G
Sbjct: 133 WTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQR-QLSG 183
>TAIR|locus:2011216 [details] [associations]
symbol:AT1G19000 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC068602
EMBL:AY045881 EMBL:AY079415 EMBL:AK316815 IPI:IPI00546856
PIR:G86323 RefSeq:NP_173334.1 RefSeq:NP_849689.1 UniGene:At.23413
ProteinModelPortal:Q9LMC7 SMR:Q9LMC7 IntAct:Q9LMC7 STRING:Q9LMC7
PRIDE:Q9LMC7 EnsemblPlants:AT1G19000.1 EnsemblPlants:AT1G19000.2
GeneID:838481 KEGG:ath:AT1G19000 TAIR:At1g19000 InParanoid:Q9LMC7
OMA:GYASAND PhylomeDB:Q9LMC7 ProtClustDB:CLSN2682289
ArrayExpress:Q9LMC7 Genevestigator:Q9LMC7 Uniprot:Q9LMC7
Length = 285
Score = 121 (47.7 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 25/47 (53%), Positives = 32/47 (68%)
Query: 3 WTDEEHDKFLEALQLFDR-DWKKIE-DFVGSKTVIQIRSHAQKYFLK 47
WT+ EH +FL LQ + DWK I +FV S+T Q+ SHAQKYFL+
Sbjct: 104 WTENEHKRFLIGLQKVGKGDWKGISRNFVKSRTPTQVASHAQKYFLR 150
>DICTYBASE|DDB_G0289151 [details] [associations]
symbol:mybI "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
dictyBase:DDB_G0289151 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 GenomeReviews:CM000154_GR
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
PROSITE:PS51294 EMBL:AAFI02000130 RefSeq:XP_636387.1
ProteinModelPortal:Q54HX6 EnsemblProtists:DDB0233332 GeneID:8626988
KEGG:ddi:DDB_G0289151 eggNOG:NOG265212 OMA:CKLIKEN Uniprot:Q54HX6
Length = 977
Score = 128 (50.1 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 3 WTDEEHDKFLEALQLFD-RDWKKIEDFVGSKTVIQIRSHAQKYFLKVQK 50
WT EEH +F+EAL + +D K I +V ++ Q+R+HAQKYFL++ +
Sbjct: 175 WTPEEHSRFIEALSKYGHKDVKSISQYVSTRNPTQVRTHAQKYFLRIDR 223
Score = 38 (18.4 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 225 EPIRNVLSSYDAKSKTVGVAAGIVANNQTND 255
+ + N+ S+Y A K V I NN N+
Sbjct: 400 QSMENIESAYHAFQKAVLKQKDINNNNNNNN 430
>TAIR|locus:2027181 [details] [associations]
symbol:AT1G74840 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0009723
"response to ethylene stimulus" evidence=IEP] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0009737 "response to abscisic
acid stimulus" evidence=IEP] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0009751 "response to salicylic acid
stimulus" evidence=IEP] [GO:0009753 "response to jasmonic acid
stimulus" evidence=IEP] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0046686
GO:GO:0009733 GO:GO:0009753 GO:GO:0009723 GO:GO:0003677
GO:GO:0009651 GO:GO:0003700 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC008263
EMBL:AC013258 HOGENOM:HOG000237594 ProtClustDB:CLSN2682289
EMBL:AY070098 EMBL:AY096393 EMBL:AY519510 IPI:IPI00526439
PIR:H96777 RefSeq:NP_177622.1 UniGene:At.11594
ProteinModelPortal:Q9S7N6 SMR:Q9S7N6 IntAct:Q9S7N6 STRING:Q9S7N6
EnsemblPlants:AT1G74840.1 GeneID:843823 KEGG:ath:AT1G74840
TAIR:At1g74840 InParanoid:Q9S7N6 OMA:GTRREIM PhylomeDB:Q9S7N6
ArrayExpress:Q9S7N6 Genevestigator:Q9S7N6 Uniprot:Q9S7N6
Length = 265
Score = 119 (46.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 25/47 (53%), Positives = 32/47 (68%)
Query: 3 WTDEEHDKFLEALQLFDR-DWKKIE-DFVGSKTVIQIRSHAQKYFLK 47
WT+EEH FL LQ + DWK I +FV ++T Q+ SHAQKYFL+
Sbjct: 98 WTEEEHKLFLLGLQRVGKGDWKGISRNFVKTRTSTQVASHAQKYFLR 144
>TAIR|locus:2150149 [details] [associations]
symbol:AT5G01200 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AL137189
HOGENOM:HOG000237920 EMBL:AY519530 IPI:IPI00517812 PIR:T45960
RefSeq:NP_195740.1 UniGene:At.27639 ProteinModelPortal:Q9LFB6
SMR:Q9LFB6 EnsemblPlants:AT5G01200.1 GeneID:831676
KEGG:ath:AT5G01200 TAIR:At5g01200 eggNOG:NOG260690
InParanoid:Q9LFB6 OMA:SAANSDY PhylomeDB:Q9LFB6
ProtClustDB:CLSN2916637 ArrayExpress:Q9LFB6 Genevestigator:Q9LFB6
Uniprot:Q9LFB6
Length = 267
Score = 119 (46.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 3 WTDEEHDKFLEALQLFDR-DWKKI-EDFVGSKTVIQIRSHAQKYFLKVQKNG 52
WT++EH +FL L+ + + DW+ I + FV ++T Q+ SHAQKYFL+ +G
Sbjct: 148 WTEDEHLRFLMGLKKYGKGDWRNIAKSFVTTRTPTQVASHAQKYFLRQLTDG 199
>UNIPROTKB|J9P785 [details] [associations]
symbol:MYSM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 PROSITE:PS50934 SMART:SM00717
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
GeneTree:ENSGT00530000063766 EMBL:AAEX03003792
Ensembl:ENSCAFT00000045716 Uniprot:J9P785
Length = 358
Score = 121 (47.7 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 29/93 (31%), Positives = 46/93 (49%)
Query: 3 WTDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFL-KVQKNGTIAHVXXXX 61
WT EE + F + L F R W KI +GS+TV+Q++S+A++YF KV+ +G
Sbjct: 79 WTIEEKELFEQGLAKFGRRWTKIAKLIGSRTVLQVKSYARQYFKNKVKLDGPEKETPNQK 138
Query: 62 XXXXXXXXXXQKASKNVLPPLQAAMAYPSVNAL 94
+ +K P A P++NA+
Sbjct: 139 SSSDLQIKTEGEGTKAWTPSDLRGRADPNLNAI 171
>TAIR|locus:2133667 [details] [associations]
symbol:AT4G09450 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AL161514
HOGENOM:HOG000237920 EMBL:AY122911 IPI:IPI00520050 PIR:C85096
RefSeq:NP_192683.1 UniGene:At.33693 ProteinModelPortal:Q9M0P7
SMR:Q9M0P7 DNASU:826528 EnsemblPlants:AT4G09450.1 GeneID:826528
KEGG:ath:AT4G09450 TAIR:At4g09450 eggNOG:NOG301281
InParanoid:Q9M0P7 OMA:EGLNKFG PhylomeDB:Q9M0P7
ProtClustDB:CLSN2684024 Genevestigator:Q9M0P7 Uniprot:Q9M0P7
Length = 200
Score = 115 (45.5 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 24/53 (45%), Positives = 33/53 (62%)
Query: 3 WTDEEHDKFLEALQLFDR-DWKKIEDF-VGSKTVIQIRSHAQKYFLKVQKNGT 53
W++EE FLE L F + DWK I + V S+T Q+ SHAQKYF + ++ T
Sbjct: 93 WSEEEQRLFLEGLNKFGKGDWKNISRYCVKSRTSTQVASHAQKYFARQKQEST 145
>UNIPROTKB|Q5VVJ2 [details] [associations]
symbol:MYSM1 "Histone H2A deubiquitinase MYSM1"
species:9606 "Homo sapiens" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0016578 "histone deubiquitination"
evidence=IDA] [GO:0003713 "transcription coactivator activity"
evidence=IDA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IDA] [GO:0008237 "metallopeptidase activity" evidence=IMP]
[GO:0004843 "ubiquitin-specific protease activity" evidence=IDA]
[GO:0042393 "histone binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR000555 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF01398
Pfam:PF04433 PROSITE:PS50934 SMART:SM00232 SMART:SM00717
GO:GO:0045893 GO:GO:0046872 GO:GO:0003677 GO:GO:0006508
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0008237 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003713
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393 GO:GO:0016585
GO:GO:0016578 GO:GO:0004843 GO:GO:0004221 eggNOG:NOG329351
KO:K11865 MEROPS:M67.005 CTD:114803 HOVERGEN:HBG079486
OrthoDB:EOG4ZGPBQ EMBL:AB067502 EMBL:AK126835 EMBL:AK292919
EMBL:BX537912 EMBL:CR627323 EMBL:CR749450 EMBL:AL450024
EMBL:AL035411 IPI:IPI00044725 IPI:IPI00740485 IPI:IPI00747702
RefSeq:NP_001078956.1 UniGene:Hs.741265 PDB:2CU7 PDB:2DCE
PDBsum:2CU7 PDBsum:2DCE ProteinModelPortal:Q5VVJ2 SMR:Q5VVJ2
DIP:DIP-58941N STRING:Q5VVJ2 PhosphoSite:Q5VVJ2 DMDM:74756898
PaxDb:Q5VVJ2 PRIDE:Q5VVJ2 DNASU:114803 Ensembl:ENST00000472487
GeneID:114803 KEGG:hsa:114803 UCSC:uc001cza.3 UCSC:uc009wab.2
GeneCards:GC01M059120 H-InvDB:HIX0000634 HGNC:HGNC:29401 MIM:612176
neXtProt:NX_Q5VVJ2 PharmGKB:PA142671301 InParanoid:Q5VVJ2
OMA:ENGLIPW EvolutionaryTrace:Q5VVJ2 GenomeRNAi:114803
NextBio:79254 Bgee:Q5VVJ2 CleanEx:HS_MYSM1 Genevestigator:Q5VVJ2
GermOnline:ENSG00000162601 Uniprot:Q5VVJ2
Length = 828
Score = 125 (49.1 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 29/92 (31%), Positives = 43/92 (46%)
Query: 3 WTDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTIAHVXXXXX 62
WT EE + F + L F R W KI +GS+TV+Q++S+A++YF K G
Sbjct: 121 WTIEEKELFEQGLAKFGRRWTKISKLIGSRTVLQVKSYARQYFKNKVKCGLDKETPNQKT 180
Query: 63 XXXXXXXXXQKASKNVLPPLQAAMAYPSVNAL 94
K +K P A P++NA+
Sbjct: 181 GHNLQVKNEDKGTKAWTPSCLRGRADPNLNAV 212
>TAIR|locus:2028461 [details] [associations]
symbol:AT1G49010 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009651 "response
to salt stress" evidence=IEP] [GO:0009733 "response to auxin
stimulus" evidence=IEP] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0009751 "response to salicylic acid
stimulus" evidence=IEP] [GO:0009753 "response to jasmonic acid
stimulus" evidence=IEP] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0016556 "mRNA modification" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046686
GO:GO:0009733 GO:GO:0009753 GO:GO:0003677 GO:GO:0009651
GO:GO:0003700 GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009739 EMBL:AC016041 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237920
EMBL:AY086906 EMBL:AY519528 EMBL:BT024862 IPI:IPI00544296
PIR:F96527 RefSeq:NP_564537.1 UniGene:At.38318
ProteinModelPortal:Q9M9A3 SMR:Q9M9A3 STRING:Q9M9A3 PRIDE:Q9M9A3
EnsemblPlants:AT1G49010.1 GeneID:841324 KEGG:ath:AT1G49010
TAIR:At1g49010 eggNOG:NOG253185 InParanoid:Q9M9A3 OMA:YVVPVAY
PhylomeDB:Q9M9A3 ProtClustDB:CLSN2688585 ArrayExpress:Q9M9A3
Genevestigator:Q9M9A3 Uniprot:Q9M9A3
Length = 314
Score = 119 (46.9 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 3 WTDEEHDKFLEALQLFDR-DWKKIE-DFVGSKTVIQIRSHAQKYFLKV 48
WT+EEH FL L F + DW+ I +FV S+T Q+ SHAQKYF+++
Sbjct: 136 WTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRL 183
>TAIR|locus:2075775 [details] [associations]
symbol:AT3G10580 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 EMBL:AC011560 EMBL:AC013428 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237920
ProtClustDB:CLSN2684024 IPI:IPI00530835 RefSeq:NP_187669.1
UniGene:At.53250 ProteinModelPortal:Q9SQY8 SMR:Q9SQY8
EnsemblPlants:AT3G10580.1 GeneID:820225 KEGG:ath:AT3G10580
TAIR:At3g10580 InParanoid:Q9SQY8 OMA:NIAQFLQ PhylomeDB:Q9SQY8
Genevestigator:Q9SQY8 Uniprot:Q9SQY8
Length = 287
Score = 118 (46.6 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 3 WTDEEHDKFLEALQLFDR-DWKKIE-DFVGSKTVIQIRSHAQKYFLKVQKN 51
W+ EEH FL+ L + + DWK I + V S++ +Q+ SHAQKYFL+ QKN
Sbjct: 97 WSPEEHRLFLDGLNKYGKGDWKSISRECVTSRSPMQVASHAQKYFLR-QKN 146
>TAIR|locus:2151621 [details] [associations]
symbol:AT5G61620 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR001005 InterPro:IPR001878
InterPro:IPR009057 Pfam:PF00249 PROSITE:PS50158 SMART:SM00343
SMART:SM00717 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB012239 IPI:IPI00529008
RefSeq:NP_200970.1 UniGene:At.55665 ProteinModelPortal:Q9FKF9
SMR:Q9FKF9 PaxDb:Q9FKF9 PRIDE:Q9FKF9 EnsemblPlants:AT5G61620.1
GeneID:836284 KEGG:ath:AT5G61620 TAIR:At5g61620 eggNOG:NOG325297
HOGENOM:HOG000152521 InParanoid:Q9FKF9 OMA:HNGHNAR PhylomeDB:Q9FKF9
ProtClustDB:CLSN2713497 Genevestigator:Q9FKF9 Uniprot:Q9FKF9
Length = 317
Score = 118 (46.6 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 3 WTDEEHDKFLEALQLFDR-DWKKI-EDFVGSKTVIQIRSHAQKYFLKVQKN 51
WT+EEH FL L + DW+ I + FV ++T Q+ SHAQKYF+++ N
Sbjct: 110 WTEEEHRNFLIGLNKLGKGDWRGIAKSFVSTRTPTQVASHAQKYFIRLNVN 160
>TAIR|locus:2154508 [details] [associations]
symbol:AT5G58900 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB016885
HOGENOM:HOG000237920 EMBL:BT005473 EMBL:AY519533 EMBL:AK118891
IPI:IPI00547099 RefSeq:NP_200698.1 UniGene:At.7757
ProteinModelPortal:Q9FIL9 SMR:Q9FIL9 DNASU:836007
EnsemblPlants:AT5G58900.1 GeneID:836007 KEGG:ath:AT5G58900
TAIR:At5g58900 eggNOG:NOG325121 InParanoid:Q9FIL9 OMA:PFTLDWA
PhylomeDB:Q9FIL9 ProtClustDB:CLSN2914846 ArrayExpress:Q9FIL9
Genevestigator:Q9FIL9 Uniprot:Q9FIL9
Length = 288
Score = 117 (46.2 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 3 WTDEEHDKFLEALQLFDR-DWKKIE-DFVGSKTVIQIRSHAQKYFLKVQKNG 52
WT+EEH FL L+ + + DW+ I +FV ++T Q+ SHAQKYF++ G
Sbjct: 143 WTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGG 194
>UNIPROTKB|Q8S9H7 [details] [associations]
symbol:DIVARICATA "Transcription factor DIVARICATA"
species:4151 "Antirrhinum majus" [GO:0009908 "flower development"
evidence=IMP] [GO:0048262 "determination of dorsal/ventral
asymmetry" evidence=IMP] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0009908
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 GO:GO:0048262 EMBL:AY077453
ProteinModelPortal:Q8S9H7 Uniprot:Q8S9H7
Length = 307
Score = 117 (46.2 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 3 WTDEEHDKFLEALQLFDR-DWKKIE-DFVGSKTVIQIRSHAQKYFLKVQKNG 52
WT+EEH FL L+ + + DW+ I +FV ++T Q+ SHAQKYF++ G
Sbjct: 134 WTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGG 185
>UNIPROTKB|F1NJR7 [details] [associations]
symbol:MYSM1 "Histone H2A deubiquitinase MYSM1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000555
InterPro:IPR001005 InterPro:IPR007526 InterPro:IPR009057
Pfam:PF00249 Pfam:PF01398 Pfam:PF04433 PROSITE:PS50934
SMART:SM00232 SMART:SM00717 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GeneTree:ENSGT00530000063766 EMBL:AADN02012509
IPI:IPI00573219 Ensembl:ENSGALT00000017668 ArrayExpress:F1NJR7
Uniprot:F1NJR7
Length = 829
Score = 122 (48.0 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 3 WTDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKN 51
WT EE + F + L F R W KI +GS+TV+Q++S+A++YF KN
Sbjct: 120 WTSEEKELFEQGLVKFGRRWTKIAKLIGSRTVLQVKSYARQYFKNKAKN 168
>UNIPROTKB|F1NCM9 [details] [associations]
symbol:MYSM1 "Histone H2A deubiquitinase MYSM1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0004843 "ubiquitin-specific protease activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0016578 "histone deubiquitination"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000555 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF01398
Pfam:PF04433 PROSITE:PS50934 SMART:SM00232 SMART:SM00717
GO:GO:0045893 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0008237 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0003713 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0016585
GO:GO:0016578 GO:GO:0004843 GO:GO:0004221
GeneTree:ENSGT00530000063766 IPI:IPI00820738 OMA:ENGLIPW
EMBL:AADN02012509 Ensembl:ENSGALT00000038040 ArrayExpress:F1NCM9
Uniprot:F1NCM9
Length = 832
Score = 122 (48.0 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 3 WTDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKN 51
WT EE + F + L F R W KI +GS+TV+Q++S+A++YF KN
Sbjct: 122 WTSEEKELFEQGLVKFGRRWTKIAKLIGSRTVLQVKSYARQYFKNKAKN 170
>TAIR|locus:2074723 [details] [associations]
symbol:AT3G11280 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009751 "response to salicylic acid stimulus" evidence=IEP]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0019344 "cysteine biosynthetic process" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002686 GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009739 InterPro:IPR017884 PROSITE:PS51293 EMBL:AC073395
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 UniGene:At.23548 EMBL:AY056180 EMBL:AY091265
EMBL:AY550308 IPI:IPI00541857 RefSeq:NP_187737.1 RefSeq:NP_850558.1
ProteinModelPortal:Q9C773 SMR:Q9C773 STRING:Q9C773 PRIDE:Q9C773
DNASU:820299 EnsemblPlants:AT3G11280.1 EnsemblPlants:AT3G11280.2
GeneID:820299 KEGG:ath:AT3G11280 TAIR:At3g11280 InParanoid:Q9C773
OMA:FEAAINF PhylomeDB:Q9C773 ProtClustDB:CLSN2684400
ArrayExpress:Q9C773 Genevestigator:Q9C773 Uniprot:Q9C773
Length = 263
Score = 115 (45.5 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 3 WTDEEHDKFLEALQLFDR-DWKKIE-DFVGSKTVIQIRSHAQKYFLKVQKNG 52
WT+EEH +FL L + + DW+ I +FV SKT Q+ SHAQKY+ + Q +G
Sbjct: 129 WTEEEHRRFLLGLLKYGKGDWRNISRNFVVSKTPTQVASHAQKYYQR-QLSG 179
>UNIPROTKB|F1PLC7 [details] [associations]
symbol:MYSM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0016578 "histone deubiquitination"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004843 "ubiquitin-specific
protease activity" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000555 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF01398 Pfam:PF04433
PROSITE:PS50934 SMART:SM00232 SMART:SM00717 GO:GO:0045893
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0008237
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003713
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0016585 GO:GO:0016578
GO:GO:0004843 GO:GO:0004221 GeneTree:ENSGT00530000063766
OMA:ENGLIPW EMBL:AAEX03003792 Ensembl:ENSCAFT00000030014
Uniprot:F1PLC7
Length = 807
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 29/93 (31%), Positives = 46/93 (49%)
Query: 3 WTDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFL-KVQKNGTIAHVXXXX 61
WT EE + F + L F R W KI +GS+TV+Q++S+A++YF KV+ +G
Sbjct: 94 WTIEEKELFEQGLAKFGRRWTKIAKLIGSRTVLQVKSYARQYFKNKVKLDGPEKETPNQK 153
Query: 62 XXXXXXXXXXQKASKNVLPPLQAAMAYPSVNAL 94
+ +K P A P++NA+
Sbjct: 154 SSSDLQIKTEGEGTKAWTPSDLRGRADPNLNAI 186
>UNIPROTKB|Q5F3F2 [details] [associations]
symbol:MYSM1 "Histone H2A deubiquitinase MYSM1"
species:9031 "Gallus gallus" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0016578 "histone deubiquitination"
evidence=ISS] [GO:0003713 "transcription coactivator activity"
evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0004843 "ubiquitin-specific protease activity" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] InterPro:IPR000555 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF01398
Pfam:PF04433 PROSITE:PS50934 SMART:SM00232 SMART:SM00717
GO:GO:0045893 GO:GO:0046872 GO:GO:0003677 GO:GO:0006508
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0008237 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003713
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393 GO:GO:0016585
GO:GO:0016578 GO:GO:0004843 GO:GO:0004221 eggNOG:NOG329351
KO:K11865 EMBL:AJ851698 IPI:IPI00820738 RefSeq:NP_001012945.1
UniGene:Gga.6922 ProteinModelPortal:Q5F3F2 SMR:Q5F3F2
MEROPS:M67.005 GeneID:424671 KEGG:gga:424671 CTD:114803
HOGENOM:HOG000113713 HOVERGEN:HBG079486 InParanoid:Q5F3F2
OrthoDB:EOG4ZGPBQ NextBio:20826977 Uniprot:Q5F3F2
Length = 832
Score = 119 (46.9 bits), Expect = 0.00021, P = 0.00021
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 3 WTDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKN 51
WT EE + F + L + R W KI +GS+TV+Q++S+A++YF KN
Sbjct: 122 WTSEEKELFEQGLVKYGRRWTKIAKLIGSRTVLQVKSYARQYFKNKAKN 170
>TAIR|locus:2094942 [details] [associations]
symbol:AT3G16350 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0009723 "response to ethylene stimulus"
evidence=IEP] [GO:0009733 "response to auxin stimulus"
evidence=IEP] [GO:0009739 "response to gibberellin stimulus"
evidence=IEP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
InterPro:IPR001005 InterPro:IPR001878 InterPro:IPR009057
Pfam:PF00249 SMART:SM00343 SMART:SM00717 GO:GO:0046686
EMBL:CP002686 GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0003677 GO:GO:0009651 GO:GO:0008270 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 EMBL:BT005832 IPI:IPI00535787 RefSeq:NP_188256.1
UniGene:At.47678 ProteinModelPortal:Q84TG2 SMR:Q84TG2 PRIDE:Q84TG2
EnsemblPlants:AT3G16350.1 GeneID:820882 KEGG:ath:AT3G16350
TAIR:At3g16350 InParanoid:Q84TG2 OMA:GMATRHE PhylomeDB:Q84TG2
ProtClustDB:CLSN2913348 Genevestigator:Q84TG2 Uniprot:Q84TG2
Length = 387
Score = 115 (45.5 bits), Expect = 0.00021, P = 0.00021
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 3 WTDEEHDKFLEALQLFDR-DWKKIE-DFVGSKTVIQIRSHAQKYFLK 47
WT+EEH FL LQ + DW+ I ++V S+T Q+ SHAQKYF++
Sbjct: 139 WTEEEHRLFLVGLQKLGKGDWRGISRNYVTSRTPTQVASHAQKYFIR 185
>TAIR|locus:2020653 [details] [associations]
symbol:AT1G70000 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0009723 "response to ethylene stimulus"
evidence=IEP] [GO:0009733 "response to auxin stimulus"
evidence=IEP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0009739 "response to gibberellin stimulus"
evidence=IEP] [GO:0009751 "response to salicylic acid stimulus"
evidence=IEP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
[GO:0080167 "response to karrikin" evidence=IEP] InterPro:IPR001005
InterPro:IPR001878 InterPro:IPR009057 Pfam:PF00249 PROSITE:PS50158
SMART:SM00343 SMART:SM00717 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009737 GO:GO:0046686 GO:GO:0009733 GO:GO:0009753
GO:GO:0009723 GO:GO:0003677 GO:GO:0009651 GO:GO:0008270
GO:GO:0003700 GO:GO:0003682 GO:GO:0080167 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC002062
EMBL:BT006413 EMBL:AY519509 EMBL:AK227711 IPI:IPI00529630
PIR:F96722 RefSeq:NP_001185359.1 RefSeq:NP_177158.1
UniGene:At.35354 UniGene:At.67206 ProteinModelPortal:O04544
SMR:O04544 PRIDE:O04544 EnsemblPlants:AT1G70000.1
EnsemblPlants:AT1G70000.2 GeneID:843337 KEGG:ath:AT1G70000
TAIR:At1g70000 eggNOG:NOG270059 HOGENOM:HOG000237594
InParanoid:O04544 OMA:SMNNLSQ PhylomeDB:O04544
ProtClustDB:CLSN2913574 ArrayExpress:O04544 Genevestigator:O04544
Uniprot:O04544
Length = 261
Score = 112 (44.5 bits), Expect = 0.00022, P = 0.00022
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 3 WTDEEHDKFLEALQLFDR-DWKKIE-DFVGSKTVIQIRSHAQKYFLK 47
WT+EEH FL L + DW+ I +FV ++T Q+ SHAQKYFL+
Sbjct: 100 WTEEEHRLFLTGLHKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLR 146
>TAIR|locus:2171519 [details] [associations]
symbol:AT5G47390 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0009723 "response to ethylene stimulus"
evidence=IEP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0009739 "response to gibberellin stimulus"
evidence=IEP] [GO:0009751 "response to salicylic acid stimulus"
evidence=IEP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
InterPro:IPR001005 InterPro:IPR001878 InterPro:IPR009057
Pfam:PF00249 PROSITE:PS50158 SMART:SM00343 SMART:SM00717
GO:GO:0009737 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046686
GO:GO:0009753 GO:GO:0009723 GO:GO:0003677 GO:GO:0009651
GO:GO:0008270 GO:GO:0003700 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB018117
HOGENOM:HOG000237594 EMBL:AY072077 EMBL:AY096661 EMBL:AY084295
EMBL:AY519516 EMBL:AK226931 IPI:IPI00516324 RefSeq:NP_199550.1
UniGene:At.23392 ProteinModelPortal:Q9LVS0 SMR:Q9LVS0 STRING:Q9LVS0
PaxDb:Q9LVS0 PRIDE:Q9LVS0 EnsemblPlants:AT5G47390.1 GeneID:834786
KEGG:ath:AT5G47390 TAIR:At5g47390 eggNOG:NOG267183
InParanoid:Q9LVS0 OMA:SSRQSAF PhylomeDB:Q9LVS0
ProtClustDB:CLSN2686371 ArrayExpress:Q9LVS0 Genevestigator:Q9LVS0
Uniprot:Q9LVS0
Length = 365
Score = 114 (45.2 bits), Expect = 0.00025, P = 0.00025
Identities = 24/51 (47%), Positives = 34/51 (66%)
Query: 3 WTDEEHDKFLEALQLFDR-DWKKIE-DFVGSKTVIQIRSHAQKYFLKVQKN 51
WT+EEH FL LQ + DW+ I ++V ++T Q+ SHAQKYF++ Q N
Sbjct: 98 WTEEEHRMFLLGLQKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIR-QSN 147
>UNIPROTKB|F1S7A6 [details] [associations]
symbol:MYSM1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0016578 "histone deubiquitination" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
activity" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000555 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF01398 Pfam:PF04433
PROSITE:PS50934 SMART:SM00232 SMART:SM00717 GO:GO:0045893
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0008237
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003713
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0016585 GO:GO:0016578
GO:GO:0004843 GO:GO:0004221 GeneTree:ENSGT00530000063766
OMA:ENGLIPW EMBL:CU929656 EMBL:CU695066 Ensembl:ENSSSCT00000004239
Uniprot:F1S7A6
Length = 835
Score = 118 (46.6 bits), Expect = 0.00028, P = 0.00028
Identities = 23/51 (45%), Positives = 35/51 (68%)
Query: 3 WTDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFL-KVQKNG 52
WT EE + F + L F R W KI +GS+TV+Q++S+A++YF KV+ +G
Sbjct: 119 WTIEEKELFEQGLAKFGRRWTKIAKLIGSRTVLQVKSYARQYFKNKVKLDG 169
>TAIR|locus:2159607 [details] [associations]
symbol:AT5G08520 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB006697
HOGENOM:HOG000237920 EMBL:AY072090 EMBL:AY096571 EMBL:AY519532
IPI:IPI00516280 RefSeq:NP_196469.1 UniGene:At.8762
ProteinModelPortal:Q9FNN6 SMR:Q9FNN6 STRING:Q9FNN6 PaxDb:Q9FNN6
PRIDE:Q9FNN6 EnsemblPlants:AT5G08520.1 GeneID:830751
KEGG:ath:AT5G08520 TAIR:At5g08520 eggNOG:NOG259915
InParanoid:Q9FNN6 OMA:NSMNRER PhylomeDB:Q9FNN6
ProtClustDB:CLSN2687300 ArrayExpress:Q9FNN6 Genevestigator:Q9FNN6
Uniprot:Q9FNN6
Length = 298
Score = 112 (44.5 bits), Expect = 0.00029, P = 0.00029
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 2 SWTDEEHDKFLEALQLFDR-DWKKIE-DFVGSKTVIQIRSHAQKYFLKV 48
+WT++EH FL L + + DW+ I +FV ++T Q+ SHAQKYF+++
Sbjct: 119 AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRL 167
>TAIR|locus:2165106 [details] [associations]
symbol:AT5G56840 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003677
"DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR001005 InterPro:IPR001878
InterPro:IPR009057 Pfam:PF00249 PROSITE:PS50158 SMART:SM00343
SMART:SM00717 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB013392
HOGENOM:HOG000237594 EMBL:AY519517 EMBL:BT012528 EMBL:BT014956
IPI:IPI00548744 RefSeq:NP_200495.1 UniGene:At.29361
ProteinModelPortal:Q9FJS9 SMR:Q9FJS9 EnsemblPlants:AT5G56840.1
GeneID:835786 KEGG:ath:AT5G56840 TAIR:At5g56840 eggNOG:NOG244478
InParanoid:Q9FJS9 OMA:ESNIRPI PhylomeDB:Q9FJS9
ProtClustDB:CLSN2916792 Genevestigator:Q9FJS9 Uniprot:Q9FJS9
Length = 233
Score = 109 (43.4 bits), Expect = 0.00038, P = 0.00038
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 3 WTDEEHDKFLEALQLFDR-DWKKIE-DFVGSKTVIQIRSHAQKYFLKVQKNGTIAH 56
WT EEH FL L+ + DW+ I +FV +K+ Q+ SHAQKYFL+ + T+ H
Sbjct: 93 WTAEEHRTFLIGLEKLGKGDWRGISRNFVVTKSPTQVASHAQKYFLR--QTTTLHH 146
>TAIR|locus:2175478 [details] [associations]
symbol:AT5G04760 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010286 "heat acclimation" evidence=RCA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AL162972
EMBL:AB008271 UniGene:At.20111 UniGene:At.68528
HOGENOM:HOG000237920 EMBL:AY050976 EMBL:AY091177 EMBL:AY088362
EMBL:AB493736 IPI:IPI00530948 PIR:T48472 RefSeq:NP_196096.1
ProteinModelPortal:Q9LZ21 SMR:Q9LZ21 IntAct:Q9LZ21
EnsemblPlants:AT5G04760.1 GeneID:830354 KEGG:ath:AT5G04760
TAIR:At5g04760 eggNOG:NOG276102 InParanoid:Q9LZ21 OMA:WRNISRW
PhylomeDB:Q9LZ21 ProtClustDB:CLSN2686445 ArrayExpress:Q9LZ21
Genevestigator:Q9LZ21 Uniprot:Q9LZ21
Length = 215
Score = 105 (42.0 bits), Expect = 0.00090, P = 0.00090
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 3 WTDEEHDKFLEALQLFDR-DWKKIE-DFVGSKTVIQIRSHAQKYFLK 47
WT+ EH FL L+ + + DW+ I + V ++T Q+ SHAQKYFL+
Sbjct: 101 WTENEHKLFLIGLKRYGKGDWRSISRNVVVTRTPTQVASHAQKYFLR 147
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.130 0.382 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 258 219 0.00092 112 3 11 23 0.42 33
32 0.39 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 40
No. of states in DFA: 603 (64 KB)
Total size of DFA: 179 KB (2103 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.52u 0.08s 16.60t Elapsed: 00:00:02
Total cpu time: 16.52u 0.08s 16.60t Elapsed: 00:00:02
Start: Sat May 11 13:00:35 2013 End: Sat May 11 13:00:37 2013