BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040812
(300 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/266 (34%), Positives = 140/266 (52%), Gaps = 27/266 (10%)
Query: 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ---ELNILRQTNSPY 113
EK+ LG GNGG VFKV HK + + A K++ + Q EL +L + NSPY
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 114 IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRN 173
IV + F GE+SI ME+MD GSL+ +K GR+ E I+ +S V+KGL Y+ ++
Sbjct: 66 IVGFYGAFYS-DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 174 -IVHRDIKPANVLINEKME-HPCGYSCLYE-------------SGEARHRKHGGYNGFAA 218
I+HRD+KP+N+L+N + E C + + S + R G + +
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQS 184
Query: 219 DIWSFGVTMMELYMGYYPFLEPGQEPD------FLSLMLAICFREPPSLPE-CSSEKFRD 271
DIWS G++++E+ +G YP P + D L+ I PP LP S +F+D
Sbjct: 185 DIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQD 244
Query: 272 FIRCCLQKGDPSKRWTASQLLSHPFL 297
F+ CL K +P++R QL+ H F+
Sbjct: 245 FVNKCLIK-NPAERADLKQLMVHAFI 269
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 142 bits (357), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/261 (35%), Positives = 138/261 (52%), Gaps = 27/261 (10%)
Query: 59 LEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ---ELNILRQTNSPYIV 115
EK+ LG GNGG VFKV HK + + A K++ + Q EL +L + NSPYIV
Sbjct: 27 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 86
Query: 116 KCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRN-I 174
+ F GE+SI ME+MD GSL+ +K GR+ E I+ +S V+KGL Y+ ++ I
Sbjct: 87 GFYGAFYS-DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 145
Query: 175 VHRDIKPANVLINEKME-HPCGYSCLYESGE----------------ARHRKHGGYNGFA 217
+HRD+KP+N+L+N + E C + SG+ + R G +
Sbjct: 146 MHRDVKPSNILVNSRGEIKLCDFGV---SGQLIDSMANSFVGTRSYMSPERLQGTHYSVQ 202
Query: 218 ADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPE-CSSEKFRDFIRCC 276
+DIWS G++++E+ +G YP L+ I PP LP S +F+DF+ C
Sbjct: 203 SDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKC 262
Query: 277 LQKGDPSKRWTASQLLSHPFL 297
L K +P++R QL+ H F+
Sbjct: 263 LIK-NPAERADLKQLMVHAFI 282
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 138 bits (348), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 140/264 (53%), Gaps = 33/264 (12%)
Query: 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ---ELNILRQTNSPY 113
EK+ LG GNGG VFKV HK + + A K++ + Q EL +L + NSPY
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 114 IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRN 173
IV + F GE+SI ME+MD GSL+ +K GR+ E I+ +S V+KGL Y+ ++
Sbjct: 69 IVGFYGAFYS-DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 127
Query: 174 -IVHRDIKPANVLINEKME-HPCGYSCLYESGE----------------ARHRKHGGYNG 215
I+HRD+KP+N+L+N + E C + SG+ + R G +
Sbjct: 128 KIMHRDVKPSNILVNSRGEIKLCDFGV---SGQLIDEMANEFVGTRSYMSPERLQGTHYS 184
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAICFREPPSLPECS-SEKFRDFI 273
+DIWS G++++E+ +G YP + P L+ I PP LP S +F+DF+
Sbjct: 185 VQSDIWSMGLSLVEMAVGRYP-----RPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFV 239
Query: 274 RCCLQKGDPSKRWTASQLLSHPFL 297
CL K +P++R QL+ H F+
Sbjct: 240 NKCLIK-NPAERADLKQLMVHAFI 262
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 144/266 (54%), Gaps = 41/266 (15%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQIF 121
L+ LG+G+ G+V+K HK+T + A+K + + +E++I++Q +SP++VK + +
Sbjct: 34 LEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSY 93
Query: 122 TKPSGEVSILMEYMDAGSLEIYVKSRGR-LSEDIICTISRQVLKGLFYMHSRNIVHRDIK 180
K + ++ I+MEY AGS+ ++ R + L+ED I TI + LKGL Y+H +HRDIK
Sbjct: 94 FK-NTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIK 152
Query: 181 PANVLINEKMEHPCGYSCLYESGEA---------RHRKHG-------------GYNGFAA 218
N+L+N + G++ L + G A R+ G GYN A
Sbjct: 153 AGNILLNTE-----GHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYN-CVA 206
Query: 219 DIWSFGVTMMELYMGYYPF--LEPGQEPDFLSLMLAICFREPPSL--PECSSEKFRDFIR 274
DIWS G+T +E+ G P+ + P + + I PP+ PE S+ F DF++
Sbjct: 207 DIWSLGITAIEMAEGKPPYADIHP------MRAIFMIPTNPPPTFRKPELWSDNFTDFVK 260
Query: 275 CCLQKGDPSKRWTASQLLSHPFLADA 300
CL K P +R TA+QLL HPF+ A
Sbjct: 261 QCLVKS-PEQRATATQLLQHPFVRSA 285
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 59/296 (19%)
Query: 59 LEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ---ELNILRQTNSPYIV 115
EK+ LG GNGG VFKV HK + + A K++ + Q EL +L + NSPYIV
Sbjct: 70 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 129
Query: 116 KCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRN-I 174
+ F GE+SI ME+MD GSL+ +K GR+ E I+ +S V+KGL Y+ ++ I
Sbjct: 130 GFYGAFYS-DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 188
Query: 175 VHRDIKPANVLINEKME-HPCGYSCLYE-------------SGEARHRKHGGYNGFAADI 220
+HRD+KP+N+L+N + E C + + S + R G + +DI
Sbjct: 189 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDI 248
Query: 221 WSFGVTMMELYMGYYPFLEPGQ-----------EPD------------------------ 245
WS G++++E+ +G YP P E D
Sbjct: 249 WSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRP 308
Query: 246 ---FLSLMLAICFREPPSLPECS-SEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297
L+ I PP LP S +F+DF+ CL K +P++R QL+ H F+
Sbjct: 309 PMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIK-NPAERADLKQLMVHAFI 363
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 127 bits (320), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 141/301 (46%), Gaps = 65/301 (21%)
Query: 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ---ELNILRQTNSPY 113
EK+ LG GNGG VFKV HK + + A K++ + Q EL +L + NSPY
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 114 IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRN 173
IV + F GE+SI ME+MD GSL+ +K GR+ E I+ +S V+KGL Y+ ++
Sbjct: 66 IVGFYGAFYS-DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 174 -IVHRDIKPANVLINEKME-HPCGYSCLYESGE----------------ARHRKHGGYNG 215
I+HRD+KP+N+L+N + E C + SG+ + R G +
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGV---SGQLIDSMANSFVGTRSYMSPERLQGTHYS 181
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQ-----------EPD------------------- 245
+DIWS G++++E+ +G YP P E D
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYG 241
Query: 246 --------FLSLMLAICFREPPSLPE-CSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPF 296
L+ I PP LP S +F+DF+ CL K +P++R QL+ H F
Sbjct: 242 MDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIK-NPAERADLKQLMVHAF 300
Query: 297 L 297
+
Sbjct: 301 I 301
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 127 bits (319), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 140/298 (46%), Gaps = 59/298 (19%)
Query: 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ---ELNILRQTNSPY 113
EK+ LG GNGG VFKV HK + + A K++ + Q EL +L + NSPY
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 114 IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRN 173
IV + F GE+SI ME+MD GSL+ +K GR+ E I+ +S V+KGL Y+ ++
Sbjct: 66 IVGFYGAFYS-DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 174 -IVHRDIKPANVLINEKME-HPCGYSCLYE-------------SGEARHRKHGGYNGFAA 218
I+HRD+KP+N+L+N + E C + + S + R G + +
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQS 184
Query: 219 DIWSFGVTMMELYMGYYPFLEPGQ-----------EPD---------------------- 245
DIWS G++++E+ +G YP P E D
Sbjct: 185 DIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDS 244
Query: 246 -----FLSLMLAICFREPPSLPE-CSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297
L+ I PP LP S +F+DF+ CL K +P++R QL+ H F+
Sbjct: 245 RPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIK-NPAERADLKQLMVHAFI 301
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 127 bits (319), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 141/301 (46%), Gaps = 65/301 (21%)
Query: 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ---ELNILRQTNSPY 113
EK+ LG GNGG VFKV HK + + A K++ + Q EL +L + NSPY
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 114 IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRN 173
IV + F GE+SI ME+MD GSL+ +K GR+ E I+ +S V+KGL Y+ ++
Sbjct: 93 IVGFYGAFYS-DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 151
Query: 174 -IVHRDIKPANVLINEKME-HPCGYSCLYESGE----------------ARHRKHGGYNG 215
I+HRD+KP+N+L+N + E C + SG+ + R G +
Sbjct: 152 KIMHRDVKPSNILVNSRGEIKLCDFGV---SGQLIDSMANSFVGTRSYMSPERLQGTHYS 208
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQ-----------EPD------------------- 245
+DIWS G++++E+ +G YP P E D
Sbjct: 209 VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFG 268
Query: 246 --------FLSLMLAICFREPPSLPE-CSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPF 296
L+ I PP LP S +F+DF+ CL K +P++R QL+ H F
Sbjct: 269 MDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIK-NPAERADLKQLMVHAF 327
Query: 297 L 297
+
Sbjct: 328 I 328
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 127 bits (319), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 141/301 (46%), Gaps = 65/301 (21%)
Query: 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ---ELNILRQTNSPY 113
EK+ LG GNGG VFKV HK + + A K++ + Q EL +L + NSPY
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 114 IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRN 173
IV + F GE+SI ME+MD GSL+ +K GR+ E I+ +S V+KGL Y+ ++
Sbjct: 66 IVGFYGAFYS-DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 174 -IVHRDIKPANVLINEKME-HPCGYSCLYESGE----------------ARHRKHGGYNG 215
I+HRD+KP+N+L+N + E C + SG+ + R G +
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGV---SGQLIDSMANSFVGTRSYMSPERLQGTHYS 181
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQ-----------EPD------------------- 245
+DIWS G++++E+ +G YP P E D
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYG 241
Query: 246 --------FLSLMLAICFREPPSLPE-CSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPF 296
L+ I PP LP S +F+DF+ CL K +P++R QL+ H F
Sbjct: 242 MDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIK-NPAERADLKQLMVHAF 300
Query: 297 L 297
+
Sbjct: 301 I 301
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 127 bits (319), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 141/301 (46%), Gaps = 65/301 (21%)
Query: 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ---ELNILRQTNSPY 113
EK+ LG GNGG VFKV HK + + A K++ + Q EL +L + NSPY
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 114 IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRN 173
IV + F GE+SI ME+MD GSL+ +K GR+ E I+ +S V+KGL Y+ ++
Sbjct: 66 IVGFYGAFYS-DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 174 -IVHRDIKPANVLINEKME-HPCGYSCLYESGE----------------ARHRKHGGYNG 215
I+HRD+KP+N+L+N + E C + SG+ + R G +
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGV---SGQLIDSMANSFVGTRSYMSPERLQGTHYS 181
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQ-----------EPD------------------- 245
+DIWS G++++E+ +G YP P E D
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYG 241
Query: 246 --------FLSLMLAICFREPPSLPE-CSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPF 296
L+ I PP LP S +F+DF+ CL K +P++R QL+ H F
Sbjct: 242 MDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIK-NPAERADLKQLMVHAF 300
Query: 297 L 297
+
Sbjct: 301 I 301
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 147/318 (46%), Gaps = 71/318 (22%)
Query: 44 TEAASYGQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ-- 101
T+ A G+ D E++ LG GNGG V KV+H+ + + A K++ + Q
Sbjct: 5 TQKAKVGELKD--DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQII 62
Query: 102 -ELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISR 160
EL +L + NSPYIV + F GE+SI ME+MD GSL+ +K R+ E+I+ +S
Sbjct: 63 RELQVLHECNSPYIVGFYGAFYS-DGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSI 121
Query: 161 QVLKGLFYMHSRN-IVHRDIKPANVLINEKME-HPCGYSCLYESGE-------------- 204
VL+GL Y+ ++ I+HRD+KP+N+L+N + E C + SG+
Sbjct: 122 AVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGV---SGQLIDSMANSFVGTRS 178
Query: 205 --ARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEP---------------GQEPD-- 245
A R G + +DIWS G++++EL +G YP P G+E +
Sbjct: 179 YMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFGRPVVDGEEGEPH 238
Query: 246 -------------------------FLSLMLAICFREPPSLPE-CSSEKFRDFIRCCLQK 279
L+ I PP LP + F++F+ CL K
Sbjct: 239 SISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIK 298
Query: 280 GDPSKRWTASQLLSHPFL 297
+P++R L +H F+
Sbjct: 299 -NPAERADLKMLTNHTFI 315
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 136/269 (50%), Gaps = 28/269 (10%)
Query: 49 YGQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP---QELNI 105
Y Q +D KL+ +G+G+ G VFK +T + A+K++ + QE+ +
Sbjct: 19 YFQSMDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITV 78
Query: 106 LRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKG 165
L Q +SPY+ K + + K + ++ I+MEY+ GS + + G L E I TI R++LKG
Sbjct: 79 LSQCDSPYVTKYYGSYLKDT-KLWIIMEYLGGGS-ALDLLEPGPLDETQIATILREILKG 136
Query: 166 LFYMHSRNIVHRDIKPANVLINE----KMEHPCGYSCLYESGEARHR------------- 208
L Y+HS +HRDIK ANVL++E K+ L ++ R+
Sbjct: 137 LDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI 196
Query: 209 KHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEK 268
K Y+ ADIWS G+T +EL G P E + ++ I PP+L S+
Sbjct: 197 KQSAYDS-KADIWSLGITAIELARGE----PPHSELHPMKVLFLIPKNNPPTLEGNYSKP 251
Query: 269 FRDFIRCCLQKGDPSKRWTASQLLSHPFL 297
++F+ CL K +PS R TA +LL H F+
Sbjct: 252 LKEFVEACLNK-EPSFRPTAKELLKHKFI 279
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 117 bits (293), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 134/272 (49%), Gaps = 28/272 (10%)
Query: 47 ASYGQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP---QEL 103
A+ +D KL +G+G+ G V+K T + A+K++ + QE+
Sbjct: 9 ANQHSRVDPEELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEI 68
Query: 104 NILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVL 163
+L Q +SPYI + + K S ++ I+MEY+ GS +K G L E I TI R++L
Sbjct: 69 TVLSQCDSPYITRYFGSYLK-STKLWIIMEYLGGGSALDLLKP-GPLEETYIATILREIL 126
Query: 164 KGLFYMHSRNIVHRDIKPANVLINE----KMEHPCGYSCLYESGEARHR----------- 208
KGL Y+HS +HRDIK ANVL++E K+ L ++ R+
Sbjct: 127 KGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE 186
Query: 209 --KHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSS 266
K Y+ F ADIWS G+T +EL G P + + ++ I PP+L S
Sbjct: 187 VIKQSAYD-FKADIWSLGITAIELAKGE----PPNSDLHPMRVLFLIPKNSPPTLEGQHS 241
Query: 267 EKFRDFIRCCLQKGDPSKRWTASQLLSHPFLA 298
+ F++F+ CL K DP R TA +LL H F+
Sbjct: 242 KPFKEFVEACLNK-DPRFRPTAKELLKHKFIT 272
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 131/257 (50%), Gaps = 28/257 (10%)
Query: 61 KLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP---QELNILRQTNSPYIVKC 117
KL+ +G+G+ G VFK +T + A+K++ + QE+ +L Q +SPY+ K
Sbjct: 26 KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKY 85
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ + K + ++ I+MEY+ GS + + G L E I TI R++LKGL Y+HS +HR
Sbjct: 86 YGSYLKDT-KLWIIMEYLGGGS-ALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHR 143
Query: 178 DIKPANVLINEKMEHPCG----YSCLYESGEARHR-------------KHGGYNGFAADI 220
DIK ANVL++E E L ++ R+ K Y+ ADI
Sbjct: 144 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDS-KADI 202
Query: 221 WSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKG 280
WS G+T +EL G P E + ++ I PP+L S+ ++F+ CL K
Sbjct: 203 WSLGITAIELARGE----PPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNK- 257
Query: 281 DPSKRWTASQLLSHPFL 297
+PS R TA +LL H F+
Sbjct: 258 EPSFRPTAKELLKHKFI 274
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 131/257 (50%), Gaps = 28/257 (10%)
Query: 61 KLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP---QELNILRQTNSPYIVKC 117
KL+ +G+G+ G VFK +T + A+K++ + QE+ +L Q +SPY+ K
Sbjct: 11 KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKY 70
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ + K + ++ I+MEY+ GS + + G L E I TI R++LKGL Y+HS +HR
Sbjct: 71 YGSYLKDT-KLWIIMEYLGGGS-ALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHR 128
Query: 178 DIKPANVLINEKMEHPCG----YSCLYESGEARHR-------------KHGGYNGFAADI 220
DIK ANVL++E E L ++ R+ K Y+ ADI
Sbjct: 129 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDS-KADI 187
Query: 221 WSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKG 280
WS G+T +EL G P E + ++ I PP+L S+ ++F+ CL K
Sbjct: 188 WSLGITAIELARGE----PPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNK- 242
Query: 281 DPSKRWTASQLLSHPFL 297
+PS R TA +LL H F+
Sbjct: 243 EPSFRPTAKELLKHKFI 259
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 131/257 (50%), Gaps = 28/257 (10%)
Query: 61 KLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP---QELNILRQTNSPYIVKC 117
KL+ +G+G+ G VFK +T + A+K++ + QE+ +L Q +SPY+ K
Sbjct: 11 KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKY 70
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ + K + ++ I+MEY+ GS + + G L E I TI R++LKGL Y+HS +HR
Sbjct: 71 YGSYLKDT-KLWIIMEYLGGGS-ALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHR 128
Query: 178 DIKPANVLINEKMEHPCG----YSCLYESGEARHR-------------KHGGYNGFAADI 220
DIK ANVL++E E L ++ R+ K Y+ ADI
Sbjct: 129 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDS-KADI 187
Query: 221 WSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKG 280
WS G+T +EL G P E + ++ I PP+L S+ ++F+ CL K
Sbjct: 188 WSLGITAIELARGE----PPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNK- 242
Query: 281 DPSKRWTASQLLSHPFL 297
+PS R TA +LL H F+
Sbjct: 243 EPSFRPTAKELLKHKFI 259
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 133/258 (51%), Gaps = 28/258 (10%)
Query: 61 KLQVLGQGNGGTVFK---VRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKC 117
KL+ +G+G+ G VFK R +Q +A+ + + + + QE+ +L Q +S Y+ K
Sbjct: 27 KLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKY 86
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ + K S ++ I+MEY+ GS +++ G E I T+ +++LKGL Y+HS +HR
Sbjct: 87 YGSYLKGS-KLWIIMEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHR 144
Query: 178 DIKPANVLINE----KMEHPCGYSCLYESGEARHR-------------KHGGYNGFAADI 220
DIK ANVL++E K+ L ++ R+ + Y+ ADI
Sbjct: 145 DIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDS-KADI 203
Query: 221 WSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKG 280
WS G+T +EL G P + + ++ I PP+L ++ F++FI CL K
Sbjct: 204 WSLGITAIELAKGE----PPNSDMHPMRVLFLIPKNNPPTLVGDFTKSFKEFIDACLNK- 258
Query: 281 DPSKRWTASQLLSHPFLA 298
DPS R TA +LL H F+
Sbjct: 259 DPSFRPTAKELLKHKFIV 276
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 132/261 (50%), Gaps = 34/261 (13%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQC--DRGTPPNPQELNILRQTNSPYIVKCHQIFT 122
LG G G V+K ++K+T AL A KV++ + E+ IL + PYIVK +
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 123 KPSGEVSILMEYMDAGSLEIYVKSRGR-LSEDIICTISRQVLKGLFYMHSRNIVHRDIKP 181
G++ I++E+ G+++ + R L+E I + RQ+L+ L ++HS+ I+HRD+K
Sbjct: 79 H-DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKA 137
Query: 182 ANVLIN--------------------EKMEHPCG--YSCLYESGEARHRKHGGYNGFAAD 219
NVL+ +K + G Y E K Y+ + AD
Sbjct: 138 GNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYD-YKAD 196
Query: 220 IWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL--PECSSEKFRDFIRCCL 277
IWS G+T++E+ P E + + ++L I +PP+L P S +FRDF++ L
Sbjct: 197 IWSLGITLIEMAQ----IEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIAL 252
Query: 278 QKGDPSKRWTASQLLSHPFLA 298
K +P R +A+QLL HPF++
Sbjct: 253 DK-NPETRPSAAQLLEHPFVS 272
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 132/261 (50%), Gaps = 34/261 (13%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQC--DRGTPPNPQELNILRQTNSPYIVKCHQIFT 122
LG G G V+K ++K+T AL A KV++ + E+ IL + PYIVK +
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 123 KPSGEVSILMEYMDAGSLEIYVKSRGR-LSEDIICTISRQVLKGLFYMHSRNIVHRDIKP 181
G++ I++E+ G+++ + R L+E I + RQ+L+ L ++HS+ I+HRD+K
Sbjct: 87 H-DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKA 145
Query: 182 ANVLIN--------------------EKMEHPCG--YSCLYESGEARHRKHGGYNGFAAD 219
NVL+ +K + G Y E K Y+ + AD
Sbjct: 146 GNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYD-YKAD 204
Query: 220 IWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL--PECSSEKFRDFIRCCL 277
IWS G+T++E+ P E + + ++L I +PP+L P S +FRDF++ L
Sbjct: 205 IWSLGITLIEMAQ----IEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIAL 260
Query: 278 QKGDPSKRWTASQLLSHPFLA 298
K +P R +A+QLL HPF++
Sbjct: 261 DK-NPETRPSAAQLLEHPFVS 280
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 121/260 (46%), Gaps = 32/260 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVM--QCDRGTPPNPQELNILRQTNSPYIVKCHQIFT 122
LG G G V+K ++K+T L A KV+ + + E++IL + P IVK F
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 123 KPSGEVSILMEYMDAGSLEIYVKSRGR-LSEDIICTISRQVLKGLFYMHSRNIVHRDIKP 181
+ + IL+E+ G+++ + R L+E I + +Q L L Y+H I+HRD+K
Sbjct: 105 YENN-LWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKA 163
Query: 182 ANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG---------------------FAADI 220
N+L + + ++ + G + AD+
Sbjct: 164 GNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADV 223
Query: 221 WSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL--PECSSEKFRDFIRCCLQ 278
WS G+T++E+ P E + + ++L I EPP+L P S F+DF++ CL+
Sbjct: 224 WSLGITLIEMA----EIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLE 279
Query: 279 KGDPSKRWTASQLLSHPFLA 298
K + RWT SQLL HPF+
Sbjct: 280 K-NVDARWTTSQLLQHPFVT 298
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 122/260 (46%), Gaps = 32/260 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVM--QCDRGTPPNPQELNILRQTNSPYIVKCHQIFT 122
LG G G V+K ++K+T L A KV+ + + E++IL + P IVK F
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 123 KPSGEVSILMEYMDAGSLEIYVKSRGR-LSEDIICTISRQVLKGLFYMHSRNIVHRDIKP 181
+ + IL+E+ G+++ + R L+E I + +Q L L Y+H I+HRD+K
Sbjct: 105 YENN-LWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKA 163
Query: 182 ANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG---------------------FAADI 220
N+L + + ++ + G + AD+
Sbjct: 164 GNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADV 223
Query: 221 WSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS--SEKFRDFIRCCLQ 278
WS G+T++E+ P E + + ++L I EPP+L + S S F+DF++ CL+
Sbjct: 224 WSLGITLIEMA----EIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLE 279
Query: 279 KGDPSKRWTASQLLSHPFLA 298
K + RWT SQLL HPF+
Sbjct: 280 K-NVDARWTTSQLLQHPFVT 298
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 121/260 (46%), Gaps = 32/260 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVM--QCDRGTPPNPQELNILRQTNSPYIVKCHQIFT 122
LG G G V+K ++K+T L A KV+ + + E++IL + P IVK F
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 123 KPSGEVSILMEYMDAGSLEIYVKSRGR-LSEDIICTISRQVLKGLFYMHSRNIVHRDIKP 181
+ + IL+E+ G+++ + R L+E I + +Q L L Y+H I+HRD+K
Sbjct: 105 YENN-LWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKA 163
Query: 182 ANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG---------------------FAADI 220
N+L + + ++ + G + AD+
Sbjct: 164 GNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADV 223
Query: 221 WSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL--PECSSEKFRDFIRCCLQ 278
WS G+T++E+ P E + + ++L I EPP+L P S F+DF++ CL+
Sbjct: 224 WSLGITLIEMA----EIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLE 279
Query: 279 KGDPSKRWTASQLLSHPFLA 298
K + RWT SQLL HPF+
Sbjct: 280 K-NVDARWTTSQLLQHPFVT 298
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 136/269 (50%), Gaps = 32/269 (11%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELN----ILRQTNS 111
++ LE L +G G G V+K+R ++T + A+K M+ N + L +L+ +
Sbjct: 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDC 83
Query: 112 PYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHS 171
PYIV+C F + +V I ME M + ++ + +G + E I+ ++ ++K L+Y+
Sbjct: 84 PYIVQCFGTFITNT-DVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKE 142
Query: 172 RN-IVHRDIKPANVLINEKMEHPC---GYSCLYESGEARHRKHGGYNGFA---------- 217
++ ++HRD+KP+N+L++E+ + G S +A+ R G A
Sbjct: 143 KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPT 202
Query: 218 -------ADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPE--CSSEK 268
AD+WS G++++EL G +P+ + + L+ +L EPP LP S
Sbjct: 203 KPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQ---EEPPLLPGHMGFSGD 259
Query: 269 FRDFIRCCLQKGDPSKRWTASQLLSHPFL 297
F+ F++ CL K D KR ++LL H F+
Sbjct: 260 FQSFVKDCLTK-DHRKRPKYNKLLEHSFI 287
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 124/280 (44%), Gaps = 48/280 (17%)
Query: 63 QVLGQGNGGTV---FKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQ 119
+V+G G V + K+ +A+ + + +C +E+ + Q + P IV +
Sbjct: 16 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 75
Query: 120 IFTKPSGEVSILMEYMDAGSLEIYVK--------SRGRLSEDIICTISRQVLKGLFYMHS 171
F E+ ++M+ + GS+ +K G L E I TI R+VL+GL Y+H
Sbjct: 76 SFV-VKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK 134
Query: 172 RNIVHRDIKPANVLINEKME---HPCGYSCLYESGE--ARHRKHGGYNG----------- 215
+HRD+K N+L+ E G S +G R++ + G
Sbjct: 135 NGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVME 194
Query: 216 ------FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEK- 268
F ADIWSFG+T +EL G P+ + P LML + +PPSL +K
Sbjct: 195 QVRGYDFKADIWSFGITAIELATGAAPY---HKYPPMKVLMLTLQ-NDPPSLETGVQDKE 250
Query: 269 --------FRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
FR I CLQK DP KR TA++LL H F A
Sbjct: 251 MLKKYGKSFRKMISLCLQK-DPEKRPTAAELLRHKFFQKA 289
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 124/280 (44%), Gaps = 48/280 (17%)
Query: 63 QVLGQGNGGTV---FKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQ 119
+V+G G V + K+ +A+ + + +C +E+ + Q + P IV +
Sbjct: 21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 80
Query: 120 IFTKPSGEVSILMEYMDAGSLEIYVK--------SRGRLSEDIICTISRQVLKGLFYMHS 171
F E+ ++M+ + GS+ +K G L E I TI R+VL+GL Y+H
Sbjct: 81 SFV-VKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK 139
Query: 172 RNIVHRDIKPANVLINEKME---HPCGYSCLYESGE--ARHRKHGGYNG----------- 215
+HRD+K N+L+ E G S +G R++ + G
Sbjct: 140 NGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVME 199
Query: 216 ------FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEK- 268
F ADIWSFG+T +EL G P+ + P LML + +PPSL +K
Sbjct: 200 QVRGYDFKADIWSFGITAIELATGAAPY---HKYPPMKVLMLTLQ-NDPPSLETGVQDKE 255
Query: 269 --------FRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
FR I CLQK DP KR TA++LL H F A
Sbjct: 256 MLKKYGKSFRKMISLCLQK-DPEKRPTAAELLRHKFFQKA 294
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 122/261 (46%), Gaps = 32/261 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN--------PQELNILRQTNSPYIVK 116
LG G V K R K T YA K ++ R + +E+NILR+ P I+
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVH 176
H IF + +V +++E + G L ++ + L+ED +Q+L G+ Y+HS+ I H
Sbjct: 73 LHDIFENKT-DVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAH 131
Query: 177 RDIKPANV-LINEKMEHP------CGYSCLYESGEARHRKHG----------GYN--GFA 217
D+KP N+ L+++ + +P G + E+G G Y G
Sbjct: 132 FDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLE 191
Query: 218 ADIWSFGVTMMELYMGYYPFL-EPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276
AD+WS GV L G PFL E QE L+ + A+ + +SE +DFIR
Sbjct: 192 ADMWSIGVITYILLSGASPFLGETKQET--LTNISAVNYDFDEEYFSNTSELAKDFIRRL 249
Query: 277 LQKGDPSKRWTASQLLSHPFL 297
L K DP +R T +Q L H ++
Sbjct: 250 LVK-DPKRRMTIAQSLEHSWI 269
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 127/264 (48%), Gaps = 34/264 (12%)
Query: 63 QVLGQ-GNGGTVFKVRHKQTLALYALKVM--QCDRGTPPNPQELNILRQTNSPYIVKCHQ 119
+++G+ G+ G V+K ++K+T L A KV+ + + E++IL + P IVK
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 74
Query: 120 IFTKPSGEVSILMEYMDAGSLEIYVKSRGR-LSEDIICTISRQVLKGLFYMHSRNIVHRD 178
F + + IL+E+ G+++ + R L+E I + +Q L L Y+H I+HRD
Sbjct: 75 AFYYENN-LWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRD 133
Query: 179 IKPANVLINEKME-HPCGYSCLYESGEARHRKHGGYNG---------------------F 216
+K N+L + + ++ ++ + G +
Sbjct: 134 LKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDY 193
Query: 217 AADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL--PECSSEKFRDFIR 274
AD+WS G+T++E+ P E + + ++L I EPP+L P S F+DF++
Sbjct: 194 KADVWSLGITLIEMA----EIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLK 249
Query: 275 CCLQKGDPSKRWTASQLLSHPFLA 298
CL+K + RWT SQLL HPF+
Sbjct: 250 KCLEK-NVDARWTTSQLLQHPFVT 272
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 121/261 (46%), Gaps = 32/261 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN--------PQELNILRQTNSPYIVK 116
LG G V K R K T YA K ++ R + +E+NILR+ P I+
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVH 176
H IF + +V +++E + G L ++ + L+ED +Q+L G+ Y+HS+ I H
Sbjct: 80 LHDIFENKT-DVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAH 138
Query: 177 RDIKPANV-LINEKMEHP------CGYSCLYESGEARHRKHG----------GYN--GFA 217
D+KP N+ L+++ + +P G + E+G G Y G
Sbjct: 139 FDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLE 198
Query: 218 ADIWSFGVTMMELYMGYYPFL-EPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276
AD+WS GV L G PFL E QE L+ + A+ + +SE +DFIR
Sbjct: 199 ADMWSIGVITYILLSGASPFLGETKQET--LTNISAVNYDFDEEYFSNTSELAKDFIRRL 256
Query: 277 LQKGDPSKRWTASQLLSHPFL 297
L K DP +R +Q L H ++
Sbjct: 257 LVK-DPKRRMXIAQSLEHSWI 276
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 121/261 (46%), Gaps = 32/261 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQ------CDRGTPPNP--QELNILRQTNSPYIVK 116
LG G V K R K T YA K ++ RG +E+NILR+ P I+
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVH 176
H IF + +V +++E + G L ++ + L+ED +Q+L G+ Y+HS+ I H
Sbjct: 94 LHDIFENKT-DVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAH 152
Query: 177 RDIKPANV-LINEKMEHP------CGYSCLYESGEARHRKHG----------GYN--GFA 217
D+KP N+ L+++ + +P G + E+G G Y G
Sbjct: 153 FDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLE 212
Query: 218 ADIWSFGVTMMELYMGYYPFL-EPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276
AD+WS GV L G PFL E QE L+ + A+ + +SE +DFIR
Sbjct: 213 ADMWSIGVITYILLSGASPFLGETKQET--LTNISAVNYDFDEEYFSNTSELAKDFIRRL 270
Query: 277 LQKGDPSKRWTASQLLSHPFL 297
L K DP +R +Q L H ++
Sbjct: 271 LVK-DPKRRMXIAQSLEHSWI 290
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 126/259 (48%), Gaps = 30/259 (11%)
Query: 64 VLGQGNGGTVFKVRHKQTLALYALKVM--QCDRGTPPNPQELNILRQTNSPYIVKCHQIF 121
VLG+G G V+ R A+K + + R + P +E+ + + IV+ F
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 122 TKPSGEVSILMEYMDAGSLEIYVKSRG---RLSEDIICTISRQVLKGLFYMHSRNIVHRD 178
++ +G + I ME + GSL ++S+ + +E I ++Q+L+GL Y+H IVHRD
Sbjct: 89 SE-NGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRD 147
Query: 179 IKPANVLINE-----KME-----------HPCGYSCL----YESGEARHRKHGGYNGFAA 218
IK NVLIN K+ +PC + Y + E + GY G AA
Sbjct: 148 IKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGY-GKAA 206
Query: 219 DIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQ 278
DIWS G T++E+ G PF E G EP + + F+ P +PE S + + FI C +
Sbjct: 207 DIWSLGCTIIEMATGKPPFYELG-EPQAAMFKVGM-FKVHPEIPESMSAEAKAFILKCFE 264
Query: 279 KGDPSKRWTASQLLSHPFL 297
DP KR A+ LL FL
Sbjct: 265 P-DPDKRACANDLLVDEFL 282
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 126/259 (48%), Gaps = 30/259 (11%)
Query: 64 VLGQGNGGTVFKVRHKQTLALYALKVM--QCDRGTPPNPQELNILRQTNSPYIVKCHQIF 121
VLG+G G V+ R A+K + + R + P +E+ + + IV+ F
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 122 TKPSGEVSILMEYMDAGSLEIYVKSRG---RLSEDIICTISRQVLKGLFYMHSRNIVHRD 178
++ +G + I ME + GSL ++S+ + +E I ++Q+L+GL Y+H IVHRD
Sbjct: 75 SE-NGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRD 133
Query: 179 IKPANVLINE-----KME-----------HPCGYSCL----YESGEARHRKHGGYNGFAA 218
IK NVLIN K+ +PC + Y + E + GY G AA
Sbjct: 134 IKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGY-GKAA 192
Query: 219 DIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQ 278
DIWS G T++E+ G PF E G EP + + F+ P +PE S + + FI C +
Sbjct: 193 DIWSLGCTIIEMATGKPPFYELG-EPQAAMFKVGM-FKVHPEIPESMSAEAKAFILKCFE 250
Query: 279 KGDPSKRWTASQLLSHPFL 297
DP KR A+ LL FL
Sbjct: 251 P-DPDKRACANDLLVDEFL 268
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 144/328 (43%), Gaps = 54/328 (16%)
Query: 11 SQPASIASSVRKPRHLVTQLNIPKPVSCPNLV------HTEAASYGQEIDGLSQLEKLQV 64
SQ A++ + +K LN +P NL E + + + + V
Sbjct: 49 SQSANLLAEAKK-------LNDAQPKGTENLYFQSMGPEDELPDWAAAKEFYQKYDPKDV 101
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQ--CDRGTPPNPQEL--------NILRQT-NSPY 113
+G+G V + H+ T +A+K+M+ +R +P +E+ +ILRQ P+
Sbjct: 102 IGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPH 161
Query: 114 IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRN 173
I+ + + S + ++ + M G L Y+ + LSE +I R +L+ + ++H+ N
Sbjct: 162 IITLIDSY-ESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANN 220
Query: 174 IVHRDIKPANVLINEKME---HPCGYSCLYESGE-------------------ARHRKHG 211
IVHRD+KP N+L+++ M+ G+SC E GE + H
Sbjct: 221 IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHP 280
Query: 212 GYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS--SEKF 269
GY G D+W+ GV + L G PF Q L L + + + S PE S
Sbjct: 281 GY-GKEVDLWACGVILFTLLAGSPPFWHRRQ---ILMLRMIMEGQYQFSSPEWDDRSSTV 336
Query: 270 RDFIRCCLQKGDPSKRWTASQLLSHPFL 297
+D I LQ DP R TA Q L HPF
Sbjct: 337 KDLISRLLQV-DPEARLTAEQALQHPFF 363
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 129/273 (47%), Gaps = 38/273 (13%)
Query: 59 LEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-PQELNILRQ-TNSPYIVK 116
E ++++G G G V+K RH +T L A+KVM QE+N+L++ ++ I
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 117 CHQIFTK--PSG---EVSILMEYMDAGSLEIYVKSR--GRLSEDIICTISRQVLKGLFYM 169
+ F K P G ++ ++ME+ AGS+ +K+ L E+ I I R++L+GL ++
Sbjct: 86 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL 145
Query: 170 HSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEARHRKHGG-------------- 212
H ++HRDIK NVL+ E E G S + R G
Sbjct: 146 HQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDE 205
Query: 213 -----YNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS-S 266
Y+ F +D+WS G+T +E+ G P + P + + I P L S
Sbjct: 206 NPDATYD-FKSDLWSLGITAIEMAEGAPPLCD--MHP--MRALFLIPRNPAPRLKSKKWS 260
Query: 267 EKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299
+KF+ FI CL K + S+R QL+ HPF+ D
Sbjct: 261 KKFQSFIESCLVK-NHSQRPATEQLMKHPFIRD 292
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 128/275 (46%), Gaps = 25/275 (9%)
Query: 46 AASYGQEIDGLSQL-EKLQVLGQGNGGTVFKVRHKQTLALYALKVM--QCDRGTPPNPQ- 101
++S+ ++ + + ++ E + LG G V K T L+A+K + + +G + +
Sbjct: 10 SSSWKKQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIEN 69
Query: 102 ELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQ 161
E+ +LR+ IV I+ P+ + ++M+ + G L + +G +E T+ RQ
Sbjct: 70 EIAVLRKIKHENIVALEDIYESPN-HLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQ 128
Query: 162 VLKGLFYMHSRNIVHRDIKPANVLINEKMEHP------CGYSCLYESGEARHRKHG--GY 213
VL ++Y+H IVHRD+KP N+L + E G S + G+ G GY
Sbjct: 129 VLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGY 188
Query: 214 NG----------FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPE 263
A D WS GV L GY PF + F ++ A + P +
Sbjct: 189 VAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDD 248
Query: 264 CSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLA 298
S+ +DFIR ++K DP+KR+T Q HP++A
Sbjct: 249 I-SDSAKDFIRNLMEK-DPNKRYTCEQAARHPWIA 281
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 121/263 (46%), Gaps = 34/263 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQ------CDRGT--PPNPQELNILRQTNSPYIVK 116
LG G V K R K T YA K ++ RG +E++ILRQ P I+
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVH 176
H ++ + +V +++E + G L ++ + LSE+ + +Q+L G+ Y+H++ I H
Sbjct: 80 LHDVYENRT-DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAH 138
Query: 177 RDIKPANVLINEKMEHPCGYSCLYESGEARHRKHG------------------GYN--GF 216
D+KP N+++ +K P + L + G A + G Y G
Sbjct: 139 FDLKPENIMLLDK-NIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL 197
Query: 217 AADIWSFGVTMMELYMGYYPFL-EPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
AD+WS GV L G PFL + QE L+ + A+ + +SE +DFIR
Sbjct: 198 EADMWSIGVITYILLSGASPFLGDTKQET--LANITAVSYDFDEEFFSQTSELAKDFIRK 255
Query: 276 CLQKGDPSKRWTASQLLSHPFLA 298
L K + KR T + L HP++
Sbjct: 256 LLVK-ETRKRLTIQEALRHPWIT 277
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 120/259 (46%), Gaps = 32/259 (12%)
Query: 64 VLGQGNGGTVFKVRHKQTLALYALKVMQC----DRGTPPNPQELNILRQTNSPYIVKCHQ 119
+LG+G+ G V K + + T YA+KV+ ++ T +E+ +L++ + P I+K +
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 120 IFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDI 179
I + S I+ E G L + R R SE I +QV G+ YMH NIVHRD+
Sbjct: 89 IL-EDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDL 147
Query: 180 KPANVLINEKMEHPCGY--------SCLYESGEARHR-----------KHGGYNGFAADI 220
KP N+L+ K E C +C ++ + + R G Y+ D+
Sbjct: 148 KPENILLESK-EKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDE-KCDV 205
Query: 221 WSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS--SEKFRDFIRCCLQ 278
WS GV + L G PF E D L + + LP+ S+ +D IR L
Sbjct: 206 WSAGVILYILLSGTPPFY-GKNEYDILKRVETGKY--AFDLPQWRTISDDAKDLIRKMLT 262
Query: 279 KGDPSKRWTASQLLSHPFL 297
PS R TA+Q L HP++
Sbjct: 263 -FHPSLRITATQCLEHPWI 280
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 126/253 (49%), Gaps = 28/253 (11%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNI-LRQTNSPYIVKCHQIF 121
QVLG G G V ++ +K+T +ALK++Q P +E+ + R + P+IV+ ++
Sbjct: 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQ---DCPKARREVELHWRASQCPHIVRIVDVY 80
Query: 122 TKPSGE---VSILMEYMDAGSLEIYVKSRGR--LSEDIICTISRQVLKGLFYMHSRNIVH 176
+ I+ME +D G L ++ RG +E I + + + + Y+HS NI H
Sbjct: 81 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 140
Query: 177 RDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYP 236
RD+KP N+L K P L + G A+ Y+ + D+WS GV M L GY P
Sbjct: 141 RDVKPENLLYTSK--RPNAILKLTDFGFAKETTGEKYDK-SCDMWSLGVIMYILLCGYPP 197
Query: 237 F-------LEPGQEPDFLSLMLAICFREPPSLPECS--SEKFRDFIRCCLQKGDPSKRWT 287
F + PG + + + E P+ PE S SE+ + IR L K +P++R T
Sbjct: 198 FYSNHGLAISPG-----MKTRIRMGQYEFPN-PEWSEVSEEVKMLIRNLL-KTEPTQRMT 250
Query: 288 ASQLLSHPFLADA 300
++ ++HP++ +
Sbjct: 251 ITEFMNHPWIMQS 263
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 121/261 (46%), Gaps = 37/261 (14%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELN 104
Q L Q E+++ LG G+ G V V+HK+T YA+K++ + E
Sbjct: 35 AQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
IL+ N P++VK F K + + ++MEY+ G + +++ GR SE + Q++
Sbjct: 95 ILQAVNFPFLVKLEFSF-KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK--------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQ-----GYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 208
Query: 210 ----HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
GYN A D W+ GV + E+ GY PF Q +++ R P
Sbjct: 209 EIILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHF 262
Query: 266 SEKFRDFIRCCLQKGDPSKRW 286
S +D +R LQ D +KR+
Sbjct: 263 SSDLKDLLRNLLQV-DLTKRF 282
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 121/261 (46%), Gaps = 37/261 (14%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELN 104
Q L Q E+++ LG G+ G V V+HK+T YA+K++ + E
Sbjct: 27 AQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKR 86
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
IL+ N P++VK F K + + ++MEY+ G + +++ GR SE + Q++
Sbjct: 87 ILQAVNFPFLVKLEFSF-KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 145
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK--------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 146 TFEYLHSLDLIYRDLKPENLLIDQQ-----GYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 200
Query: 210 ----HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
GYN A D W+ GV + E+ GY PF Q +++ R P
Sbjct: 201 EIILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHF 254
Query: 266 SEKFRDFIRCCLQKGDPSKRW 286
S +D +R LQ D +KR+
Sbjct: 255 SSDLKDLLRNLLQV-DLTKRF 274
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 121/261 (46%), Gaps = 37/261 (14%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELN 104
Q L Q E+++ LG G+ G V V+HK+T YA+K++ + E
Sbjct: 55 AQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKR 114
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
IL+ N P++VK F K + + ++MEY+ G + +++ GR SE + Q++
Sbjct: 115 ILQAVNFPFLVKLEFSF-KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 173
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK--------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 174 TFEYLHSLDLIYRDLKPENLLIDQQ-----GYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 228
Query: 210 ----HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
GYN A D W+ GV + E+ GY PF Q +++ R P
Sbjct: 229 EIILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHF 282
Query: 266 SEKFRDFIRCCLQKGDPSKRW 286
S +D +R LQ D +KR+
Sbjct: 283 SSDLKDLLRNLLQV-DLTKRF 302
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 121/261 (46%), Gaps = 37/261 (14%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELN 104
Q L Q E+++ LG G+ G V V+HK+T YA+K++ + E
Sbjct: 35 AQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
IL+ N P++VK F K + + ++MEY+ G + +++ GR SE + Q++
Sbjct: 95 ILQAVNFPFLVKLEFSF-KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK--------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQ-----GYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 208
Query: 210 ----HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
GYN A D W+ GV + E+ GY PF Q +++ R P
Sbjct: 209 EIILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHF 262
Query: 266 SEKFRDFIRCCLQKGDPSKRW 286
S +D +R LQ D +KR+
Sbjct: 263 SSDLKDLLRNLLQV-DLTKRF 282
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 121/261 (46%), Gaps = 37/261 (14%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELN 104
Q L Q E+++ LG G+ G V V+HK+T YA+K++ + E
Sbjct: 35 AQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
IL+ N P++VK F K + + ++MEY+ G + +++ GR SE + Q++
Sbjct: 95 ILQAVNFPFLVKLEFSF-KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK--------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQ-----GYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 208
Query: 210 ----HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
GYN A D W+ GV + E+ GY PF Q +++ R P
Sbjct: 209 EIILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHF 262
Query: 266 SEKFRDFIRCCLQKGDPSKRW 286
S +D +R LQ D +KR+
Sbjct: 263 SSDLKDLLRNLLQV-DLTKRF 282
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 130/279 (46%), Gaps = 38/279 (13%)
Query: 37 SCPNLVHTEAASYGQEIDGLSQLEKLQVLGQGNGGTVF---KVRHKQTLALYALKVMQCD 93
S + T G E SQ E L+VLGQG+ G VF K+ LYA+KV++
Sbjct: 4 SIKEIAITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKA 63
Query: 94 ----RGTPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR 149
R E +IL + N P+IVK H F + G++ ++++++ G L +
Sbjct: 64 TLKVRDRVRTKMERDILVEVNHPFIVKLHYAF-QTEGKLYLILDFLRGGDLFTRLSKEVM 122
Query: 150 LSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEK--------------MEHP-- 193
+E+ + ++ L ++HS I++RD+KP N+L++E+ ++H
Sbjct: 123 FTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK 182
Query: 194 ----CGYSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSL 249
CG + Y + E +R+ G+ +AD WSFGV M E+ G PF Q D
Sbjct: 183 AYSFCG-TVEYMAPEVVNRR--GHTQ-SADWWSFGVLMFEMLTGTLPF----QGKDRKET 234
Query: 250 MLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTA 288
M I + +P+ S + + +R ++ +P+ R A
Sbjct: 235 MTMIL-KAKLGMPQFLSPEAQSLLRMLFKR-NPANRLGA 271
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 130/279 (46%), Gaps = 38/279 (13%)
Query: 37 SCPNLVHTEAASYGQEIDGLSQLEKLQVLGQGNGGTVF---KVRHKQTLALYALKVMQCD 93
S + T G E SQ E L+VLGQG+ G VF K+ LYA+KV++
Sbjct: 5 SIKEIAITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKA 64
Query: 94 ----RGTPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR 149
R E +IL + N P+IVK H F + G++ ++++++ G L +
Sbjct: 65 TLKVRDRVRTKMERDILVEVNHPFIVKLHYAF-QTEGKLYLILDFLRGGDLFTRLSKEVM 123
Query: 150 LSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEK--------------MEHP-- 193
+E+ + ++ L ++HS I++RD+KP N+L++E+ ++H
Sbjct: 124 FTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK 183
Query: 194 ----CGYSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSL 249
CG + Y + E +R+ G+ +AD WSFGV M E+ G PF Q D
Sbjct: 184 AYSFCG-TVEYMAPEVVNRR--GHTQ-SADWWSFGVLMFEMLTGTLPF----QGKDRKET 235
Query: 250 MLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTA 288
M I + +P+ S + + +R ++ +P+ R A
Sbjct: 236 MTMIL-KAKLGMPQFLSPEAQSLLRMLFKR-NPANRLGA 272
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 120/262 (45%), Gaps = 32/262 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ---ELNILRQTNSPYIVKCHQIF 121
LG G G V V + + +K + DR P Q E+ +L+ + P I+K ++F
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 122 TKPSGEVSILMEYMDAGSLE---IYVKSRGR-LSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ + I+ME + G L + ++RG+ LSE + + +Q++ L Y HS+++VH+
Sbjct: 90 -EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHK 148
Query: 178 DIKPANVLINEKMEHP------CGYSCLYESGEARHRKHGG--YNG---------FAADI 220
D+KP N+L + H G + L++S E G Y F DI
Sbjct: 149 DLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDI 208
Query: 221 WSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS--SEKFRDFIRCCLQ 278
WS GV M L G PF E + ++EP EC + + D ++ L
Sbjct: 209 WSAGVVMYFLLTGCLPFTGTSLE----EVQQKATYKEPNYAVECRPLTPQAVDLLKQMLT 264
Query: 279 KGDPSKRWTASQLLSHPFLADA 300
K DP +R +A+Q+L H + A
Sbjct: 265 K-DPERRPSAAQVLHHEWFKQA 285
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 117/257 (45%), Gaps = 28/257 (10%)
Query: 64 VLGQGNGGTVFKVRHKQTLALYALKVMQC----DRGTPPNPQELNILRQTNSPYIVKCHQ 119
+LG+G+ G V K + + T YA+KV+ ++ T +E+ +L++ + P I+K +
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 120 IFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDI 179
I + S I+ E G L + R R SE I +QV G+ YMH NIVHRD+
Sbjct: 89 IL-EDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDL 147
Query: 180 KPANVLINEKMEHPCGY--------SCLYESGEARHR-----------KHGGYNGFAADI 220
KP N+L+ K E C +C ++ + + R G Y+ D+
Sbjct: 148 KPENILLESK-EKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDE-KCDV 205
Query: 221 WSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKG 280
WS GV + L G PF E D L + + S+ +D IR L
Sbjct: 206 WSAGVILYILLSGTPPFY-GKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLT-F 263
Query: 281 DPSKRWTASQLLSHPFL 297
PS R TA+Q L HP++
Sbjct: 264 HPSLRITATQCLEHPWI 280
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 117/257 (45%), Gaps = 28/257 (10%)
Query: 64 VLGQGNGGTVFKVRHKQTLALYALKVMQC----DRGTPPNPQELNILRQTNSPYIVKCHQ 119
+LG+G+ G V K + + T YA+KV+ ++ T +E+ +L++ + P I+K +
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 120 IFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDI 179
I + S I+ E G L + R R SE I +QV G+ YMH NIVHRD+
Sbjct: 89 IL-EDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDL 147
Query: 180 KPANVLINEKMEHPCGY--------SCLYESGEARHR-----------KHGGYNGFAADI 220
KP N+L+ K E C +C ++ + + R G Y+ D+
Sbjct: 148 KPENILLESK-EKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDE-KCDV 205
Query: 221 WSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKG 280
WS GV + L G PF E D L + + S+ +D IR L
Sbjct: 206 WSAGVILYILLSGTPPFY-GKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLT-F 263
Query: 281 DPSKRWTASQLLSHPFL 297
PS R TA+Q L HP++
Sbjct: 264 HPSLRITATQCLEHPWI 280
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 130/279 (46%), Gaps = 38/279 (13%)
Query: 37 SCPNLVHTEAASYGQEIDGLSQLEKLQVLGQGNGGTVF---KVRHKQTLALYALKVMQCD 93
S + T G E SQ E L+VLGQG+ G VF K+ LYA+KV++
Sbjct: 4 SIKEIAITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKA 63
Query: 94 ----RGTPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR 149
R E +IL + N P+IVK H F + G++ ++++++ G L +
Sbjct: 64 TLKVRDRVRTKMERDILVEVNHPFIVKLHYAF-QTEGKLYLILDFLRGGDLFTRLSKEVM 122
Query: 150 LSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEK--------------MEHP-- 193
+E+ + ++ L ++HS I++RD+KP N+L++E+ ++H
Sbjct: 123 FTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK 182
Query: 194 ----CGYSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSL 249
CG + Y + E +R+ G+ +AD WSFGV M E+ G PF Q D
Sbjct: 183 AYSFCG-TVEYMAPEVVNRR--GHTQ-SADWWSFGVLMFEMLTGTLPF----QGKDRKET 234
Query: 250 MLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTA 288
M I + +P+ S + + +R ++ +P+ R A
Sbjct: 235 MTMIL-KAKLGMPQFLSPEAQSLLRMLFKR-NPANRLGA 271
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 121/269 (44%), Gaps = 23/269 (8%)
Query: 50 GQEIDGLSQLEKLQV-LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQ 108
G D LS +++ LG+G V++ + K T YALKV++ E+ +L +
Sbjct: 45 GSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLR 104
Query: 109 TNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFY 168
+ P I+K +IF P+ E+S+++E + G L + +G SE +Q+L+ + Y
Sbjct: 105 LSHPNIIKLKEIFETPT-EISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAY 163
Query: 169 MHSRNIVHRDIKPANVL----------------INEKMEHPC--GYSCLYESGEARHRKH 210
+H IVHRD+KP N+L +++ +EH C A
Sbjct: 164 LHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILR 223
Query: 211 GGYNGFAADIWSFGVTMMELYMGYYPFL-EPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
G G D+WS G+ L G+ PF E G + F ++ + P E S
Sbjct: 224 GCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNA- 282
Query: 270 RDFIRCCLQKGDPSKRWTASQLLSHPFLA 298
+D +R + DP KR T Q L HP++
Sbjct: 283 KDLVRKLIVL-DPKKRLTTFQALQHPWVT 310
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 121/261 (46%), Gaps = 37/261 (14%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELN 104
Q L Q E+++ LG G+ G V V+HK+T +A+K++ + E
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
IL+ N P++VK F K + + ++MEY+ G + +++ GR SE + Q++
Sbjct: 94 ILQAVNFPFLVKLEYSF-KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK--------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQ-----GYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 210 ----HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
GYN A D W+ GV + E+ GY PF Q +++ R P
Sbjct: 208 EIILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHF 261
Query: 266 SEKFRDFIRCCLQKGDPSKRW 286
S +D +R LQ D +KR+
Sbjct: 262 SSDLKDLLRNLLQV-DLTKRF 281
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 121/261 (46%), Gaps = 37/261 (14%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELN 104
Q L Q E+++ LG G+ G V V+HK+T +A+K++ + E
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
IL+ N P++VK F K + + ++MEY+ G + +++ GR SE + Q++
Sbjct: 94 ILQAVNFPFLVKLEYSF-KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK--------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQ-----GYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 210 ----HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
GYN A D W+ GV + E+ GY PF Q +++ R P
Sbjct: 208 EIILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHF 261
Query: 266 SEKFRDFIRCCLQKGDPSKRW 286
S +D +R LQ D +KR+
Sbjct: 262 SSDLKDLLRNLLQV-DLTKRF 281
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 121/261 (46%), Gaps = 37/261 (14%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELN 104
Q L Q E+++ LG G+ G V V+HK+T +A+K++ + E
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
IL+ N P++VK F K + + ++MEY+ G + +++ GR SE + Q++
Sbjct: 94 ILQAVNFPFLVKLEYSF-KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK--------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQ-----GYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 210 ----HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
GYN A D W+ GV + E+ GY PF Q +++ R P
Sbjct: 208 EIILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHF 261
Query: 266 SEKFRDFIRCCLQKGDPSKRW 286
S +D +R LQ D +KR+
Sbjct: 262 SSDLKDLLRNLLQV-DLTKRF 281
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 119/261 (45%), Gaps = 32/261 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN--------PQELNILRQTNSPYIVK 116
LG G V K R K T YA K ++ R +E++IL++ P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVH 176
H+++ + +V +++E + G L ++ + L+E+ +Q+L G++Y+HS I H
Sbjct: 79 LHEVYENKT-DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 177 RDIKPANVLINE-----------------KMEHPCGYSCLYESGEARHRKHGGYN--GFA 217
D+KP N+++ + K++ + ++ + E + Y G
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLE 197
Query: 218 ADIWSFGVTMMELYMGYYPFL-EPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276
AD+WS GV L G PFL + QE L+ + A+ + +S +DFIR
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQET--LANVSAVNYEFEDEYFSNTSALAKDFIRRL 255
Query: 277 LQKGDPSKRWTASQLLSHPFL 297
L K DP KR T L HP++
Sbjct: 256 LVK-DPKKRMTIQDSLQHPWI 275
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 119/261 (45%), Gaps = 32/261 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN--------PQELNILRQTNSPYIVK 116
LG G V K R K T YA K ++ R +E++IL++ P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVH 176
H+++ + +V +++E + G L ++ + L+E+ +Q+L G++Y+HS I H
Sbjct: 79 LHEVYENKT-DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 177 RDIKPANVLINE-----------------KMEHPCGYSCLYESGEARHRKHGGYN--GFA 217
D+KP N+++ + K++ + ++ + E + Y G
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLE 197
Query: 218 ADIWSFGVTMMELYMGYYPFL-EPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276
AD+WS GV L G PFL + QE L+ + A+ + +S +DFIR
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQET--LANVSAVNYEFEDEYFSNTSALAKDFIRRL 255
Query: 277 LQKGDPSKRWTASQLLSHPFL 297
L K DP KR T L HP++
Sbjct: 256 LVK-DPKKRMTIQDSLQHPWI 275
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 119/260 (45%), Gaps = 30/260 (11%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN--------PQELNILRQTNSPYIVK 116
LG G V K R K T YA K ++ R +E++IL++ P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVH 176
H+++ + +V +++E + G L ++ + L+E+ +Q+L G++Y+HS I H
Sbjct: 79 LHEVYENKT-DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 177 RDIKPANVLINE-----------------KMEHPCGYSCLYESGEARHRKHGGYN--GFA 217
D+KP N+++ + K++ + ++ + E + Y G
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLE 197
Query: 218 ADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCL 277
AD+WS GV L G PFL ++ + L+ + A+ + +S +DFIR L
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQ-ETLANVSAVNYEFEDEYFSNTSALAKDFIRRLL 256
Query: 278 QKGDPSKRWTASQLLSHPFL 297
K DP KR T L HP++
Sbjct: 257 VK-DPKKRMTIQDSLQHPWI 275
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 119/261 (45%), Gaps = 32/261 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN--------PQELNILRQTNSPYIVK 116
LG G V K R K T YA K ++ R +E++IL++ P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVH 176
H+++ + +V +++E + G L ++ + L+E+ +Q+L G++Y+HS I H
Sbjct: 79 LHEVYENKT-DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 177 RDIKPANVLINE-----------------KMEHPCGYSCLYESGEARHRKHGGYN--GFA 217
D+KP N+++ + K++ + ++ + E + Y G
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLE 197
Query: 218 ADIWSFGVTMMELYMGYYPFL-EPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276
AD+WS GV L G PFL + QE L+ + A+ + +S +DFIR
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQET--LANVSAVNYEFEDEYFSNTSALAKDFIRRL 255
Query: 277 LQKGDPSKRWTASQLLSHPFL 297
L K DP KR T L HP++
Sbjct: 256 LVK-DPKKRMTIQDSLQHPWI 275
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 119/261 (45%), Gaps = 32/261 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN--------PQELNILRQTNSPYIVK 116
LG G V K R K T YA K ++ R +E++IL++ P ++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVH 176
H+++ + +V +++E + G L ++ + L+E+ +Q+L G++Y+HS I H
Sbjct: 78 LHEVYENKT-DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 136
Query: 177 RDIKPANVLINE-----------------KMEHPCGYSCLYESGEARHRKHGGYN--GFA 217
D+KP N+++ + K++ + ++ + E + Y G
Sbjct: 137 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLE 196
Query: 218 ADIWSFGVTMMELYMGYYPFL-EPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276
AD+WS GV L G PFL + QE L+ + A+ + +S +DFIR
Sbjct: 197 ADMWSIGVITYILLSGASPFLGDTKQET--LANVSAVNYEFEDEYFSNTSALAKDFIRRL 254
Query: 277 LQKGDPSKRWTASQLLSHPFL 297
L K DP KR T L HP++
Sbjct: 255 LVK-DPKKRMTIQDSLQHPWI 274
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 119/261 (45%), Gaps = 32/261 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN--------PQELNILRQTNSPYIVK 116
LG G V K R K T YA K ++ R +E++IL++ P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVH 176
H+++ + +V +++E + G L ++ + L+E+ +Q+L G++Y+HS I H
Sbjct: 79 LHEVYENKT-DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 177 RDIKPANVLINE-----------------KMEHPCGYSCLYESGEARHRKHGGYN--GFA 217
D+KP N+++ + K++ + ++ + E + Y G
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLE 197
Query: 218 ADIWSFGVTMMELYMGYYPFL-EPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276
AD+WS GV L G PFL + QE L+ + A+ + +S +DFIR
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQET--LANVSAVNYEFEDEYFSNTSALAKDFIRRL 255
Query: 277 LQKGDPSKRWTASQLLSHPFL 297
L K DP KR T L HP++
Sbjct: 256 LVK-DPKKRMTIQDSLQHPWI 275
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 131/269 (48%), Gaps = 35/269 (13%)
Query: 59 LEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ---ELNI-LRQTNSPYI 114
LE + LG+G G V K+RH + + A+K ++ + + +L+I +R + P+
Sbjct: 53 LEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFT 112
Query: 115 VKCHQIFTKPSGEVSILMEYMDAGSLEIY--VKSRGR-LSEDIICTISRQVLKGLFYMHS 171
V + + G+V I ME MD + Y V +G+ + EDI+ I+ ++K L ++HS
Sbjct: 113 VTFYGALFR-EGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS 171
Query: 172 R-NIVHRDIKPANVLIN-----------------EKMEHPCGYSCLYESGEARHRKHGGY 213
+ +++HRD+KP+NVLIN + + C R
Sbjct: 172 KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQ 231
Query: 214 NGFA--ADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREP-PSLP-ECSSEKF 269
G++ +DIWS G+TM+EL + +P+ G F L + EP P LP + S +F
Sbjct: 232 KGYSVKSDIWSLGITMIELAILRFPYDSWGTP--FQQLKQVV--EEPSPQLPADKFSAEF 287
Query: 270 RDFIRCCLQKGDPSKRWTASQLLSHPFLA 298
DF CL+K + +R T +L+ HPF
Sbjct: 288 VDFTSQCLKK-NSKERPTYPELMQHPFFT 315
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 121/260 (46%), Gaps = 37/260 (14%)
Query: 51 QEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELNI 105
Q L Q ++++ LG G+ G V V+HK++ YA+K++ + E I
Sbjct: 22 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 81
Query: 106 LRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKG 165
L+ N P++VK F K + + ++MEY+ G + +++ GR SE + Q++
Sbjct: 82 LQAVNFPFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT 140
Query: 166 LFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK---------------- 209
Y+HS ++++RD+KP N+LI+E+ GY + + G A+ K
Sbjct: 141 FEYLHSLDLIYRDLKPENLLIDEQ-----GYIQVTDFGFAKRVKGRTWXLCGTPEYLAPE 195
Query: 210 ---HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSS 266
GYN A D W+ GV + E+ GY PF Q +++ R P S
Sbjct: 196 IILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHFS 249
Query: 267 EKFRDFIRCCLQKGDPSKRW 286
+D +R LQ D +KR+
Sbjct: 250 SDLKDLLRNLLQV-DLTKRF 268
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 119/261 (45%), Gaps = 32/261 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN--------PQELNILRQTNSPYIVK 116
LG G V K R K T YA K ++ R +E++IL++ P ++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVH 176
H+++ + +V +++E + G L ++ + L+E+ +Q+L G++Y+HS I H
Sbjct: 78 LHEVYENKT-DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 136
Query: 177 RDIKPANVLINE-----------------KMEHPCGYSCLYESGEARHRKHGGYN--GFA 217
D+KP N+++ + K++ + ++ + E + Y G
Sbjct: 137 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLE 196
Query: 218 ADIWSFGVTMMELYMGYYPFL-EPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276
AD+WS GV L G PFL + QE L+ + A+ + +S +DFIR
Sbjct: 197 ADMWSIGVITYILLSGASPFLGDTKQET--LANVSAVNYEFEDEYFSNTSALAKDFIRRL 254
Query: 277 LQKGDPSKRWTASQLLSHPFL 297
L K DP KR T L HP++
Sbjct: 255 LVK-DPKKRMTIQDSLQHPWI 274
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 119/261 (45%), Gaps = 32/261 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN--------PQELNILRQTNSPYIVK 116
LG G V K R K T YA K ++ R +E++IL++ P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVH 176
H+++ + +V +++E + G L ++ + L+E+ +Q+L G++Y+HS I H
Sbjct: 79 LHEVYENKT-DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 177 RDIKPANVLINE-----------------KMEHPCGYSCLYESGEARHRKHGGYN--GFA 217
D+KP N+++ + K++ + ++ + E + Y G
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLE 197
Query: 218 ADIWSFGVTMMELYMGYYPFL-EPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276
AD+WS GV L G PFL + QE L+ + A+ + +S +DFIR
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQET--LANVSAVNYEFEDEYFSNTSALAKDFIRRL 255
Query: 277 LQKGDPSKRWTASQLLSHPFL 297
L K DP KR T L HP++
Sbjct: 256 LVK-DPKKRMTIQDSLQHPWI 275
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 120/261 (45%), Gaps = 37/261 (14%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELN 104
Q L Q E+++ LG G+ G V V+HK+T YA+K++ + E
Sbjct: 35 AQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
IL+ N P++VK F K + + ++MEY G + +++ GR SE + Q++
Sbjct: 95 ILQAVNFPFLVKLEFSF-KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK--------------- 209
Y+HS ++++RD+KP N++I+++ GY + + G A+ K
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMIDQQ-----GYIKVTDFGFAKRVKGRTWXLCGTPEYLAP 208
Query: 210 ----HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
GYN A D W+ GV + E+ GY PF Q +++ R P
Sbjct: 209 EIILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHF 262
Query: 266 SEKFRDFIRCCLQKGDPSKRW 286
S +D +R LQ D +KR+
Sbjct: 263 SSDLKDLLRNLLQV-DLTKRF 282
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 119/261 (45%), Gaps = 32/261 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN--------PQELNILRQTNSPYIVK 116
LG G V K R K T YA K ++ R +E++IL++ P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVH 176
H+++ + +V +++E + G L ++ + L+E+ +Q+L G++Y+HS I H
Sbjct: 79 LHEVYENKT-DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 177 RDIKPANVLINE-----------------KMEHPCGYSCLYESGEARHRKHGGYN--GFA 217
D+KP N+++ + K++ + ++ + E + Y G
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLE 197
Query: 218 ADIWSFGVTMMELYMGYYPFL-EPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276
AD+WS GV L G PFL + QE L+ + A+ + +S +DFIR
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQET--LANVSAVNYEFEDEYFSNTSALAKDFIRRL 255
Query: 277 LQKGDPSKRWTASQLLSHPFL 297
L K DP KR T L HP++
Sbjct: 256 LVK-DPKKRMTIQDSLQHPWI 275
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 119/261 (45%), Gaps = 32/261 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN--------PQELNILRQTNSPYIVK 116
LG G V K R K T YA K ++ R +E++IL++ P ++
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVH 176
H+++ + +V +++E + G L ++ + L+E+ +Q+L G++Y+HS I H
Sbjct: 79 LHEVYENKT-DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 177 RDIKPANVLINE-----------------KMEHPCGYSCLYESGEARHRKHGGYN--GFA 217
D+KP N+++ + K++ + ++ + E + Y G
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLE 197
Query: 218 ADIWSFGVTMMELYMGYYPFL-EPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276
AD+WS GV L G PFL + QE L+ + A+ + +S +DFIR
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQET--LANVSAVNYEFEDEYFSNTSALAKDFIRRL 255
Query: 277 LQKGDPSKRWTASQLLSHPFL 297
L K DP KR T L HP++
Sbjct: 256 LVK-DPKKRMTIQDSLQHPWI 275
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 119/261 (45%), Gaps = 32/261 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN--------PQELNILRQTNSPYIVK 116
LG G V K R K T YA K ++ R +E++IL++ P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVH 176
H+++ + +V +++E + G L ++ + L+E+ +Q+L G++Y+HS I H
Sbjct: 79 LHEVYENKT-DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 177 RDIKPANVLINE-----------------KMEHPCGYSCLYESGEARHRKHGGYN--GFA 217
D+KP N+++ + K++ + ++ + E + Y G
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLE 197
Query: 218 ADIWSFGVTMMELYMGYYPFL-EPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276
AD+WS GV L G PFL + QE L+ + A+ + +S +DFIR
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQET--LANVSAVNYEFEDEYFSNTSALAKDFIRRL 255
Query: 277 LQKGDPSKRWTASQLLSHPFL 297
L K DP KR T L HP++
Sbjct: 256 LVK-DPKKRMTIQDSLQHPWI 275
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 121/260 (46%), Gaps = 37/260 (14%)
Query: 51 QEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELNI 105
Q L Q ++++ LG G+ G V V+HK++ YA+K++ + E I
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 106 LRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKG 165
L+ N P++VK F K + + ++MEY+ G + +++ GR SE + Q++
Sbjct: 95 LQAVNFPFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 166 LFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK---------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQ-----GYIQVTDFGFAKRVKGRTWXLCGTPEYLAPE 208
Query: 210 ---HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSS 266
GYN A D W+ GV + E+ GY PF EP + + I P S
Sbjct: 209 IILSKGYNK-AVDWWALGVLIYEMAAGYPPFF--ADEP--IQIYEKIV-SGKVRFPSHFS 262
Query: 267 EKFRDFIRCCLQKGDPSKRW 286
+D +R LQ D +KR+
Sbjct: 263 SDLKDLLRNLLQV-DLTKRF 281
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 120/261 (45%), Gaps = 37/261 (14%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELN 104
Q L Q E+++ +G G+ G V V+H +T YA+K++ + E
Sbjct: 34 AQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
IL+ N P++VK F K + + ++MEYM G + +++ GR SE + Q++
Sbjct: 94 ILQAVNFPFLVKLEFSF-KDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK--------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQ-----GYIKVADFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 210 ----HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
GYN A D W+ GV + E+ GY PF Q +++ R P
Sbjct: 208 EIILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHF 261
Query: 266 SEKFRDFIRCCLQKGDPSKRW 286
S +D +R LQ D +KR+
Sbjct: 262 SSDLKDLLRNLLQV-DLTKRF 281
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 120/263 (45%), Gaps = 34/263 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQ------CDRGTPPNP--QELNILRQTNSPYIVK 116
LG G V K R K T YA K ++ RG +E++ILRQ ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVH 176
H ++ + +V +++E + G L ++ + LSE+ + +Q+L G+ Y+H++ I H
Sbjct: 80 LHDVYENRT-DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAH 138
Query: 177 RDIKPANVLINEKMEHPCGYSCLYESGEARHRKHG------------------GYN--GF 216
D+KP N+++ +K P + L + G A + G Y G
Sbjct: 139 FDLKPENIMLLDK-NIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL 197
Query: 217 AADIWSFGVTMMELYMGYYPFL-EPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
AD+WS GV L G PFL + QE L+ + A+ + +SE +DFIR
Sbjct: 198 EADMWSIGVITYILLSGASPFLGDTKQET--LANITAVSYDFDEEFFSQTSELAKDFIRK 255
Query: 276 CLQKGDPSKRWTASQLLSHPFLA 298
L K + KR T + L HP++
Sbjct: 256 LLVK-ETRKRLTIQEALRHPWIT 277
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 120/261 (45%), Gaps = 37/261 (14%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELN 104
Q L Q E+++ +G G+ G V V+H +T YA+K++ + E
Sbjct: 34 AQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
IL+ N P++VK F K + + ++MEYM G + +++ GR SE + Q++
Sbjct: 94 ILQAVNFPFLVKLEFSF-KDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK--------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQ-----GYIKVADFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 210 ----HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
GYN A D W+ GV + E+ GY PF Q +++ R P
Sbjct: 208 EIILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHF 261
Query: 266 SEKFRDFIRCCLQKGDPSKRW 286
S +D +R LQ D +KR+
Sbjct: 262 SSDLKDLLRNLLQV-DLTKRF 281
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 120/261 (45%), Gaps = 37/261 (14%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELN 104
Q L Q E+++ LG G+ G V V+HK+T YA+K++ + E
Sbjct: 27 AQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKR 86
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
IL+ N P++VK F K + + ++MEY+ G + +++ GR E + Q++
Sbjct: 87 ILQAVNFPFLVKLEFSF-KDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL 145
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK--------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 146 TFEYLHSLDLIYRDLKPENLLIDQQ-----GYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 200
Query: 210 ----HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
GYN A D W+ GV + E+ GY PF Q +++ R P
Sbjct: 201 EIILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHF 254
Query: 266 SEKFRDFIRCCLQKGDPSKRW 286
S +D +R LQ D +KR+
Sbjct: 255 SSDLKDLLRNLLQV-DLTKRF 274
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 119/260 (45%), Gaps = 32/260 (12%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-----PQELNILRQTNSPYIVK 116
++VLG G VF V+ + T L+ALK C + +P E+ +L++ IV
Sbjct: 14 MEVLGSGAFSEVFLVKQRLTGKLFALK---CIKKSPAFRDSSLENEIAVLKKIKHENIVT 70
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVH 176
I+ + + ++M+ + G L + RG +E + +QVL + Y+H IVH
Sbjct: 71 LEDIY-ESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVH 129
Query: 177 RDIKPANVLINEKMEHPCGYSCLYESGEARHRKHG------GYNGF-------------A 217
RD+KP N+L E+ + + G ++ ++G G G+ A
Sbjct: 130 RDLKPENLLYLTPEEN--SKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKA 187
Query: 218 ADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCL 277
D WS GV L GY PF E + F + E P + SE +DFI C L
Sbjct: 188 VDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDI-SESAKDFI-CHL 245
Query: 278 QKGDPSKRWTASQLLSHPFL 297
+ DP++R+T + LSHP++
Sbjct: 246 LEKDPNERYTCEKALSHPWI 265
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 124/269 (46%), Gaps = 30/269 (11%)
Query: 55 GLS-QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELNILRQ 108
GLS + ++++ LG G G V + K T A A+K+++ T + E+ +L+Q
Sbjct: 1 GLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQ 60
Query: 109 TNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFY 168
+ P I+K ++ F ++ME G L + R + SE I +QVL G Y
Sbjct: 61 LDHPNIMKLYEFFEDKRN-YYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTY 119
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPC------GYSCLYESGEARHRKHGGYNGFA----- 217
+H NIVHRD+KP N+L+ K G S +E G + G A
Sbjct: 120 LHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLR 179
Query: 218 ------ADIWSFGVTMMELYMGYYPFLEPGQ-EPDFLSLMLAICFR-EPPSLPECSSEKF 269
D+WS GV + L GY PF GQ + + L + F +PP + S E
Sbjct: 180 KKYDEKCDVWSCGVILYILLCGYPPF--GGQTDQEILKRVEKGKFSFDPPDWTQVSDEA- 236
Query: 270 RDFIRCCLQKGDPSKRWTASQLLSHPFLA 298
+ ++ L +PSKR +A + L+HP++
Sbjct: 237 KQLVKLMLTY-EPSKRISAEEALNHPWIV 264
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 124/269 (46%), Gaps = 30/269 (11%)
Query: 55 GLS-QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELNILRQ 108
GLS + ++++ LG G G V + K T A A+K+++ T + E+ +L+Q
Sbjct: 18 GLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQ 77
Query: 109 TNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFY 168
+ P I+K ++ F ++ME G L + R + SE I +QVL G Y
Sbjct: 78 LDHPNIMKLYEFFEDKRN-YYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTY 136
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPC------GYSCLYESGEARHRKHGGYNGFA----- 217
+H NIVHRD+KP N+L+ K G S +E G + G A
Sbjct: 137 LHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLR 196
Query: 218 ------ADIWSFGVTMMELYMGYYPFLEPGQ-EPDFLSLMLAICFR-EPPSLPECSSEKF 269
D+WS GV + L GY PF GQ + + L + F +PP + S E
Sbjct: 197 KKYDEKCDVWSCGVILYILLCGYPPF--GGQTDQEILKRVEKGKFSFDPPDWTQVSDEA- 253
Query: 270 RDFIRCCLQKGDPSKRWTASQLLSHPFLA 298
+ ++ L +PSKR +A + L+HP++
Sbjct: 254 KQLVKLMLTY-EPSKRISAEEALNHPWIV 281
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 131/271 (48%), Gaps = 35/271 (12%)
Query: 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ---ELNI-LRQTNSP 112
LE + LG+G G V K+RH + + A+K ++ + + +L+I +R + P
Sbjct: 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCP 66
Query: 113 YIVKCHQIFTKPSGEVSILMEYMDAGSLEIY--VKSRGR-LSEDIICTISRQVLKGLFYM 169
+ V + + G+V I ME MD + Y V +G+ + EDI+ I+ ++K L ++
Sbjct: 67 FTVTFYGALFR-EGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL 125
Query: 170 HSR-NIVHRDIKPANVLIN-----------------EKMEHPCGYSCLYESGEARHRKHG 211
HS+ +++HRD+KP+NVLIN + + C R
Sbjct: 126 HSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPEL 185
Query: 212 GYNGFA--ADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREP-PSLP-ECSSE 267
G++ +DIWS G+TM+EL + +P+ G F L + EP P LP + S
Sbjct: 186 NQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP--FQQLKQVV--EEPSPQLPADKFSA 241
Query: 268 KFRDFIRCCLQKGDPSKRWTASQLLSHPFLA 298
+F DF CL+K + +R T +L+ HPF
Sbjct: 242 EFVDFTSQCLKK-NSKERPTYPELMQHPFFT 271
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 120/263 (45%), Gaps = 34/263 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQ------CDRGTPPNP--QELNILRQTNSPYIVK 116
LG G V K R K T YA K ++ RG +E++ILRQ ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVH 176
H ++ + +V +++E + G L ++ + LSE+ + +Q+L G+ Y+H++ I H
Sbjct: 80 LHDVYENRT-DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAH 138
Query: 177 RDIKPANVLINEKMEHPCGYSCLYESGEARHRKHG------------------GYN--GF 216
D+KP N+++ +K P + L + G A + G Y G
Sbjct: 139 FDLKPENIMLLDK-NIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL 197
Query: 217 AADIWSFGVTMMELYMGYYPFL-EPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
AD+WS GV L G PFL + QE L+ + A+ + +SE +DFIR
Sbjct: 198 EADMWSIGVITYILLSGASPFLGDTKQET--LANITAVSYDFDEEFFSQTSELAKDFIRK 255
Query: 276 CLQKGDPSKRWTASQLLSHPFLA 298
L K + KR T + L HP++
Sbjct: 256 LLVK-ETRKRLTIQEALRHPWIT 277
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 121/260 (46%), Gaps = 37/260 (14%)
Query: 51 QEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELNI 105
Q L Q ++++ LG G+ G V V+HK++ YA+K++ + E I
Sbjct: 56 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 115
Query: 106 LRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKG 165
L+ N P++VK F K + + ++MEY+ G + +++ GR SE + Q++
Sbjct: 116 LQAVNFPFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT 174
Query: 166 LFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHG-------------- 211
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 175 FEYLHSLDLIYRDLKPENLLIDQQ-----GYIQVTDFGFAKRVKGATWTLCGTPEYLAPE 229
Query: 212 -----GYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSS 266
GYN A D W+ GV + E+ GY PF Q +++ R P S
Sbjct: 230 IILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHFS 283
Query: 267 EKFRDFIRCCLQKGDPSKRW 286
+D +R LQ D +KR+
Sbjct: 284 SDLKDLLRNLLQV-DLTKRF 302
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 120/261 (45%), Gaps = 37/261 (14%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELN 104
Q L Q E+++ LG G+ G V V+H +T YA+K++ + E
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
IL+ N P++VK F K + + ++MEY+ G + +++ GR SE + Q++
Sbjct: 94 ILQAVNFPFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK--------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQ-----GYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 210 ----HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
GYN A D W+ GV + E+ GY PF Q +++ R P
Sbjct: 208 EIILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHF 261
Query: 266 SEKFRDFIRCCLQKGDPSKRW 286
S +D +R LQ D +KR+
Sbjct: 262 SSDLKDLLRNLLQV-DLTKRF 281
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 119/261 (45%), Gaps = 32/261 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN--------PQELNILRQTNSPYIVK 116
LG G V K R K T YA K ++ R +E++IL++ P ++
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVH 176
H+++ + +V +++E + G L ++ + L+E+ +Q+L G++Y+HS I H
Sbjct: 79 LHEVYENKT-DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 177 RDIKPANVLINE-----------------KMEHPCGYSCLYESGEARHRKHGGYN--GFA 217
D+KP N+++ + K++ + ++ + E + Y G
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLE 197
Query: 218 ADIWSFGVTMMELYMGYYPFL-EPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276
AD+WS GV L G PFL + QE L+ + A+ + +S +DFIR
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQET--LANVSAVNYEFEDEYFSNTSALAKDFIRRL 255
Query: 277 LQKGDPSKRWTASQLLSHPFL 297
L K DP KR T L HP++
Sbjct: 256 LVK-DPKKRMTIQDSLQHPWI 275
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 121/260 (46%), Gaps = 37/260 (14%)
Query: 51 QEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELNI 105
Q L Q ++++ LG G+ G V V+HK++ YA+K++ + E I
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 106 LRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKG 165
L+ N P++VK F K + + ++MEY+ G + +++ GR SE + Q++
Sbjct: 95 LQAVNFPFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 166 LFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK---------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQ-----GYIQVTDFGFAKRVKGRTWXLCGTPEYLAPE 208
Query: 210 ---HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSS 266
GYN A D W+ GV + E+ GY PF Q +++ R P S
Sbjct: 209 IILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHFS 262
Query: 267 EKFRDFIRCCLQKGDPSKRW 286
+D +R LQ D +KR+
Sbjct: 263 SDLKDLLRNLLQV-DLTKRF 281
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 121/260 (46%), Gaps = 37/260 (14%)
Query: 51 QEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELNI 105
Q L Q ++++ LG G+ G V V+HK++ YA+K++ + E I
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 106 LRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKG 165
L+ N P++VK F K + + ++MEY+ G + +++ GR SE + Q++
Sbjct: 95 LQAVNFPFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 166 LFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK---------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQ-----GYIQVTDFGFAKRVKGRTWXLCGTPEYLAPA 208
Query: 210 ---HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSS 266
GYN A D W+ GV + E+ GY PF Q +++ R P S
Sbjct: 209 IILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHFS 262
Query: 267 EKFRDFIRCCLQKGDPSKRW 286
+D +R LQ D +KR+
Sbjct: 263 SDLKDLLRNLLQV-DLTKRF 281
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 121/260 (46%), Gaps = 37/260 (14%)
Query: 51 QEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELNI 105
Q L Q ++++ LG G+ G V V+HK++ YA+K++ + E I
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 106 LRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKG 165
L+ N P++VK F K + + ++MEY+ G + +++ GR SE + Q++
Sbjct: 95 LQAVNFPFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 166 LFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK---------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQ-----GYIQVTDFGFAKRVKGRTWXLCGTPEYLAPE 208
Query: 210 ---HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSS 266
GYN A D W+ GV + E+ GY PF Q +++ R P S
Sbjct: 209 IILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHFS 262
Query: 267 EKFRDFIRCCLQKGDPSKRW 286
+D +R LQ D +KR+
Sbjct: 263 SDLKDLLRNLLQV-DLTKRF 281
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 121/260 (46%), Gaps = 37/260 (14%)
Query: 51 QEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELNI 105
Q L Q ++++ LG G+ G V V+HK++ YA+K++ + E I
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 106 LRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKG 165
L+ N P++VK F K + + ++MEY+ G + +++ GR SE + Q++
Sbjct: 95 LQAVNFPFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 166 LFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK---------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQ-----GYIQVTDFGFAKRVKGRTWXLCGTPEALAPE 208
Query: 210 ---HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSS 266
GYN A D W+ GV + E+ GY PF Q +++ R P S
Sbjct: 209 IILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHFS 262
Query: 267 EKFRDFIRCCLQKGDPSKRW 286
+D +R LQ D +KR+
Sbjct: 263 SDLKDLLRNLLQV-DLTKRF 281
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 120/261 (45%), Gaps = 37/261 (14%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELN 104
Q L Q E+++ LG G+ G V V+H +T YA+K++ + E
Sbjct: 35 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
IL+ N P++VK F K + + ++MEY+ G + +++ GR SE + Q++
Sbjct: 95 ILQAVNFPFLVKLEFSF-KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK--------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQ-----GYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 208
Query: 210 ----HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
GYN A D W+ GV + E+ GY PF Q +++ R P
Sbjct: 209 EIILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHF 262
Query: 266 SEKFRDFIRCCLQKGDPSKRW 286
S +D +R LQ D +KR+
Sbjct: 263 SSDLKDLLRNLLQV-DLTKRF 282
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 121/260 (46%), Gaps = 37/260 (14%)
Query: 51 QEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELNI 105
Q L Q ++++ LG G+ G V V+HK++ YA+K++ + E I
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 106 LRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKG 165
L+ N P++VK F K + + ++MEY+ G + +++ GR SE + Q++
Sbjct: 95 LQAVNFPFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 166 LFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK---------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQ-----GYIQVTDFGFAKRVKGRTWXLAGTPEYLAPE 208
Query: 210 ---HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSS 266
GYN A D W+ GV + E+ GY PF Q +++ R P S
Sbjct: 209 IILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHFS 262
Query: 267 EKFRDFIRCCLQKGDPSKRW 286
+D +R LQ D +KR+
Sbjct: 263 SDLKDLLRNLLQV-DLTKRF 281
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 120/261 (45%), Gaps = 37/261 (14%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELN 104
Q L Q E+++ LG G+ G V V+H +T YA+K++ + E
Sbjct: 35 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
IL+ N P++VK F K + + ++MEY+ G + +++ GR SE + Q++
Sbjct: 95 ILQAVNFPFLVKLEFSF-KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK--------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQ-----GYIQVTDFGFAKRVKGRTWTLCGTPEYLAP 208
Query: 210 ----HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
GYN A D W+ GV + E+ GY PF Q +++ R P
Sbjct: 209 EIILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHF 262
Query: 266 SEKFRDFIRCCLQKGDPSKRW 286
S +D +R LQ D +KR+
Sbjct: 263 SSDLKDLLRNLLQV-DLTKRF 282
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 120/261 (45%), Gaps = 37/261 (14%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELN 104
Q L Q E+++ LG G+ G V V+H +T YA+K++ + E
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
IL+ N P++VK F K + + ++MEY+ G + +++ GR SE + Q++
Sbjct: 94 ILQAVNFPFLVKLEFSF-KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK--------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQ-----GYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 210 ----HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
GYN A D W+ GV + E+ GY PF Q +++ R P
Sbjct: 208 EIILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHF 261
Query: 266 SEKFRDFIRCCLQKGDPSKRW 286
S +D +R LQ D +KR+
Sbjct: 262 SSDLKDLLRNLLQV-DLTKRF 281
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 121/260 (46%), Gaps = 37/260 (14%)
Query: 51 QEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELNI 105
Q L Q ++++ LG G+ G V V+HK++ YA+K++ + E I
Sbjct: 36 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 106 LRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKG 165
L+ N P++VK F K + + ++MEY+ G + +++ GR SE + Q++
Sbjct: 96 LQAVNFPFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT 154
Query: 166 LFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK---------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQ-----GYIQVTDFGFAKRVKGRTWXLCGTPEYLAPE 209
Query: 210 ---HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSS 266
GYN A D W+ GV + E+ GY PF Q +++ R P S
Sbjct: 210 IILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHFS 263
Query: 267 EKFRDFIRCCLQKGDPSKRW 286
+D +R LQ D +KR+
Sbjct: 264 SDLKDLLRNLLQV-DLTKRF 282
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 121/260 (46%), Gaps = 37/260 (14%)
Query: 51 QEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELNI 105
Q L Q ++++ LG G+ G V V+HK++ YA+K++ + E I
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 106 LRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKG 165
L+ N P++VK F K + + ++MEY+ G + +++ GR SE + Q++
Sbjct: 95 LQAVNFPFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 166 LFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK---------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQ-----GYIQVTDFGFAKRVKGRTWXLXGTPEYLAPE 208
Query: 210 ---HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSS 266
GYN A D W+ GV + E+ GY PF Q +++ R P S
Sbjct: 209 IILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHFS 262
Query: 267 EKFRDFIRCCLQKGDPSKRW 286
+D +R LQ D +KR+
Sbjct: 263 SDLKDLLRNLLQV-DLTKRF 281
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 120/261 (45%), Gaps = 37/261 (14%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELN 104
Q L Q E+++ LG G+ G V V+H +T YA+K++ + E
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
IL+ N P++VK F K + + ++MEY+ G + +++ GR SE + Q++
Sbjct: 94 ILQAVNFPFLVKLEFSF-KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK--------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQ-----GYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 210 ----HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
GYN A D W+ GV + E+ GY PF Q +++ R P
Sbjct: 208 EIILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHF 261
Query: 266 SEKFRDFIRCCLQKGDPSKRW 286
S +D +R LQ D +KR+
Sbjct: 262 SSDLKDLLRNLLQV-DLTKRF 281
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 121/260 (46%), Gaps = 37/260 (14%)
Query: 51 QEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELNI 105
Q L Q ++++ LG G+ G V V+HK++ YA+K++ + E I
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 106 LRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKG 165
L+ N P++VK F K + + ++MEY+ G + +++ GR SE + Q++
Sbjct: 95 LQAVNFPFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 166 LFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK---------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQ-----GYIQVTDFGFAKRVKGRTWXLCGTPEYLAPE 208
Query: 210 ---HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSS 266
GYN A D W+ GV + E+ GY PF Q +++ R P S
Sbjct: 209 IILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHFS 262
Query: 267 EKFRDFIRCCLQKGDPSKRW 286
+D +R LQ D +KR+
Sbjct: 263 SDLKDLLRNLLQV-DLTKRF 281
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 126/269 (46%), Gaps = 38/269 (14%)
Query: 44 TEAASYGQEIDGLSQLEKLQVLGQGNGGTVF---KVRHKQTLALYALKVMQCD----RGT 96
T G E S E L+VLGQG+ G VF KV + LYA+KV++ R
Sbjct: 15 THHVKAGSEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDR 74
Query: 97 PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIIC 156
E +IL N P++VK H F + G++ ++++++ G L + +E+ +
Sbjct: 75 VRTKMERDILADVNHPFVVKLHYAF-QTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVK 133
Query: 157 TISRQVLKGLFYMHSRNIVHRDIKPANVLINEK--------------MEHP------CGY 196
++ GL ++HS I++RD+KP N+L++E+ ++H CG
Sbjct: 134 FYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCG- 192
Query: 197 SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFR 256
+ Y + E +R+ + +AD WS+GV M E+ G PF Q D M + +
Sbjct: 193 TVEYMAPEVVNRQGHSH---SADWWSYGVLMFEMLTGSLPF----QGKDRKETM-TLILK 244
Query: 257 EPPSLPECSSEKFRDFIRCCLQKGDPSKR 285
+P+ S + + +R ++ +P+ R
Sbjct: 245 AKLGMPQFLSTEAQSLLRALFKR-NPANR 272
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 120/261 (45%), Gaps = 37/261 (14%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELN 104
Q L Q E+++ LG G+ G V V+H +T YA+K++ + E
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
IL+ N P++VK F K + + ++MEY+ G + +++ GR SE + Q++
Sbjct: 94 ILQAVNFPFLVKLEFSF-KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK--------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQ-----GYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 210 ----HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
GYN A D W+ GV + E+ GY PF Q +++ R P
Sbjct: 208 EIILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHF 261
Query: 266 SEKFRDFIRCCLQKGDPSKRW 286
S +D +R LQ D +KR+
Sbjct: 262 SSDLKDLLRNLLQV-DLTKRF 281
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 124/272 (45%), Gaps = 32/272 (11%)
Query: 51 QEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELNI 105
Q L Q ++++ LG G+ G V V+HK++ YA+K++ + E I
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 106 LRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKG 165
L+ N P++VK F K + + ++MEY+ G + +++ GR SE + Q++
Sbjct: 95 LQAVNFPFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 166 LFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK---------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQ-----GYIQVTDFGFAKRVKGRTWXLCGTPEYLAPE 208
Query: 210 ---HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSS 266
GYN A D W+ GV + E+ GY PF Q +++ R P
Sbjct: 209 IILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVRFPSHFSSDLK 266
Query: 267 EKFRDFIRCCLQKGDPSKRWTASQLLSHPFLA 298
+ R+ ++ L K + + + + +H + A
Sbjct: 267 DLLRNLLQVDLTKAFGNLKNGVNDIKNHKWFA 298
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 120/261 (45%), Gaps = 37/261 (14%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELN 104
Q L Q E+++ LG G+ G V V+H +T YA+K++ + E
Sbjct: 20 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 79
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
IL+ N P++VK F K + + ++MEY+ G + +++ GR SE + Q++
Sbjct: 80 ILQAVNFPFLVKLEFSF-KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 138
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK--------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 139 TFEYLHSLDLIYRDLKPENLLIDQQ-----GYIQVTDFGFAKRVKGRTWTLCGTPEYLAP 193
Query: 210 ----HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
GYN A D W+ GV + E+ GY PF Q +++ R P
Sbjct: 194 EIILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHF 247
Query: 266 SEKFRDFIRCCLQKGDPSKRW 286
S +D +R LQ D +KR+
Sbjct: 248 SSDLKDLLRNLLQV-DLTKRF 267
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 119/260 (45%), Gaps = 36/260 (13%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ-ELNILRQTNSPYIVKCHQIFTK 123
+G GN G +R K T L A+K ++ N Q E+ R P IV+ ++
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILT 87
Query: 124 PSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPAN 183
P+ ++I+MEY G L + + GR SED +Q+L G+ Y HS I HRD+K N
Sbjct: 88 PT-HLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLEN 146
Query: 184 VLIN----------------EKMEHPCGYSCL----YESGEARHRKHGGYNGFAADIWSF 223
L++ + H S + Y + E R+ Y+G AD+WS
Sbjct: 147 TLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQE--YDGKIADVWSC 204
Query: 224 GVTMMELYMGYYPFLEPGQEPDF---LSLMLAICFREPPSL---PECSSEKFRDFIRCCL 277
GVT+ + +G YPF +P + D+ + +L++ + P + PEC R F+
Sbjct: 205 GVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFV---- 260
Query: 278 QKGDPSKRWTASQLLSHPFL 297
DP+ R + ++ +H +
Sbjct: 261 --ADPATRISIPEIKTHSWF 278
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 120/263 (45%), Gaps = 34/263 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQ------CDRGTPPNP--QELNILRQTNSPYIVK 116
LG G V K R K T YA K ++ RG +E++ILRQ ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVH 176
H ++ + +V +++E + G L ++ + LSE+ + +Q+L G+ Y+H++ I H
Sbjct: 80 LHDVYENRT-DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAH 138
Query: 177 RDIKPANVLINEKMEHPCGYSCLYESGEARHRKHG------------------GYN--GF 216
D+KP N+++ +K P + L + G A + G Y G
Sbjct: 139 FDLKPENIMLLDK-NIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL 197
Query: 217 AADIWSFGVTMMELYMGYYPFL-EPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
AD+WS GV L G PFL + QE L+ + ++ + +SE +DFIR
Sbjct: 198 EADMWSIGVITYILLSGASPFLGDTKQET--LANITSVSYDFDEEFFSHTSELAKDFIRK 255
Query: 276 CLQKGDPSKRWTASQLLSHPFLA 298
L K + KR T + L HP++
Sbjct: 256 LLVK-ETRKRLTIQEALRHPWIT 277
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 120/263 (45%), Gaps = 34/263 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQ------CDRGTPPNP--QELNILRQTNSPYIVK 116
LG G V K R K T YA K ++ RG +E++ILRQ ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVH 176
H ++ + +V +++E + G L ++ + LSE+ + +Q+L G+ Y+H++ I H
Sbjct: 80 LHDVYENRT-DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAH 138
Query: 177 RDIKPANVLINEKMEHPCGYSCLYESGEARHRKHG------------------GYN--GF 216
D+KP N+++ +K P + L + G A + G Y G
Sbjct: 139 FDLKPENIMLLDK-NIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL 197
Query: 217 AADIWSFGVTMMELYMGYYPFL-EPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
AD+WS GV L G PFL + QE L+ + ++ + +SE +DFIR
Sbjct: 198 EADMWSIGVITYILLSGASPFLGDTKQET--LANITSVSYDFDEEFFSHTSELAKDFIRK 255
Query: 276 CLQKGDPSKRWTASQLLSHPFLA 298
L K + KR T + L HP++
Sbjct: 256 LLVK-ETRKRLTIQEALRHPWIT 277
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 117/261 (44%), Gaps = 32/261 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN--------PQELNILRQTNSPYIVK 116
LG G V K R K T YA K ++ R +E++IL++ P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVH 176
H+++ + +V +++E + G L ++ + L+E+ +Q+L G++Y+HS I H
Sbjct: 79 LHEVYENKT-DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 177 RDIKPANV-LINEKMEHP------CGYSCLYESGEARHRKHG----------GYN--GFA 217
D+KP N+ L++ + P G + + G G Y G
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIVNYEPLGLE 197
Query: 218 ADIWSFGVTMMELYMGYYPFL-EPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276
AD+WS GV L G PFL + QE L+ + A+ + +S +DFIR
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQET--LANVSAVNYEFEDEYFSNTSALAKDFIRRL 255
Query: 277 LQKGDPSKRWTASQLLSHPFL 297
L K DP KR T L HP++
Sbjct: 256 LVK-DPKKRMTIQDSLQHPWI 275
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 122/273 (44%), Gaps = 45/273 (16%)
Query: 59 LEKLQVLGQGNGGTVFKVRH---KQTLALYALKVMQ------CDRGTPPNPQELNILRQT 109
E L+VLG+G G VF+VR T ++A+KV++ + T E NIL +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
P+IV F + G++ +++EY+ G L + ++ G ED C ++ L ++
Sbjct: 79 KHPFIVDLIYAF-QTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHL 137
Query: 170 HSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGY---------------- 213
H + I++RD+KP N+++N + G+ L + G + H G
Sbjct: 138 HQKGIIYRDLKPENIMLNHQ-----GHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEI 192
Query: 214 -----NGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEK 268
+ A D WS G M ++ G PF ++ + +L PP L +++
Sbjct: 193 LMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKT-IDKILKCKLNLPPYL----TQE 247
Query: 269 FRDFIRCCLQKGDPSKRWT----ASQLLSHPFL 297
RD ++ L++ S+ A ++ +HPF
Sbjct: 248 ARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFF 280
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 118/260 (45%), Gaps = 30/260 (11%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN--------PQELNILRQTNSPYIVK 116
LG G V K R K T YA K ++ R +E++IL++ P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVH 176
H+++ + +V ++ E + G L ++ + L+E+ +Q+L G++Y+HS I H
Sbjct: 79 LHEVYENKT-DVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 177 RDIKPANVLINE-----------------KMEHPCGYSCLYESGEARHRKHGGYN--GFA 217
D+KP N+++ + K++ + ++ + E + Y G
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLE 197
Query: 218 ADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCL 277
AD+WS GV L G PFL ++ + L+ + A+ + +S +DFIR L
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQ-ETLANVSAVNYEFEDEYFSNTSALAKDFIRRLL 256
Query: 278 QKGDPSKRWTASQLLSHPFL 297
K DP KR T L HP++
Sbjct: 257 VK-DPKKRMTIQDSLQHPWI 275
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 120/263 (45%), Gaps = 34/263 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQ------CDRGTPPNP--QELNILRQTNSPYIVK 116
LG G V K R K T YA K ++ RG +E++ILRQ ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVH 176
H ++ + +V +++E + G L ++ + LSE+ + +Q+L G+ Y+H++ I H
Sbjct: 80 LHDVYENRT-DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAH 138
Query: 177 RDIKPANVLINEKMEHPCGYSCLYESGEARHRKHG------------------GYN--GF 216
D+KP N+++ +K P + L + G A + G Y G
Sbjct: 139 FDLKPENIMLLDK-NIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL 197
Query: 217 AADIWSFGVTMMELYMGYYPFL-EPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
AD+WS GV L G PFL + QE L+ + ++ + +SE +DFIR
Sbjct: 198 EADMWSIGVITYILLSGASPFLGDTKQET--LANITSVSYDFDEEFFSHTSELAKDFIRK 255
Query: 276 CLQKGDPSKRWTASQLLSHPFLA 298
L K + KR T + L HP++
Sbjct: 256 LLVK-ETRKRLTIQEALRHPWIT 277
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 120/261 (45%), Gaps = 37/261 (14%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELN 104
Q L Q E+++ +G G+ G V V+H +T YA+K++ + E
Sbjct: 34 AQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
IL+ N P++VK F K + + ++MEY+ G + +++ GR SE + Q++
Sbjct: 94 ILQAVNFPFLVKLEFSF-KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK--------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQ-----GYIKVADFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 210 ----HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
GYN A D W+ GV + E+ GY PF Q +++ R P
Sbjct: 208 EIILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHF 261
Query: 266 SEKFRDFIRCCLQKGDPSKRW 286
S +D +R LQ D +KR+
Sbjct: 262 SSDLKDLLRNLLQV-DLTKRF 281
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 122/273 (44%), Gaps = 45/273 (16%)
Query: 59 LEKLQVLGQGNGGTVFKVRH---KQTLALYALKVMQ------CDRGTPPNPQELNILRQT 109
E L+VLG+G G VF+VR T ++A+KV++ + T E NIL +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
P+IV F + G++ +++EY+ G L + ++ G ED C ++ L ++
Sbjct: 79 KHPFIVDLIYAF-QTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHL 137
Query: 170 HSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGY---------------- 213
H + I++RD+KP N+++N + G+ L + G + H G
Sbjct: 138 HQKGIIYRDLKPENIMLNHQ-----GHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEI 192
Query: 214 -----NGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEK 268
+ A D WS G M ++ G PF ++ + +L PP L +++
Sbjct: 193 LMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKT-IDKILKCKLNLPPYL----TQE 247
Query: 269 FRDFIRCCLQKGDPSKRWT----ASQLLSHPFL 297
RD ++ L++ S+ A ++ +HPF
Sbjct: 248 ARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFF 280
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 121/260 (46%), Gaps = 37/260 (14%)
Query: 51 QEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELNI 105
Q L Q ++++ LG G+ G V V+HK++ YA+K++ + E I
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 106 LRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKG 165
L+ N P++VK F K + + ++MEY+ G + +++ GR SE + Q++
Sbjct: 95 LQAVNFPFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 166 LFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK---------------- 209
Y+HS ++++RD+KP N++I+++ GY + + G A+ K
Sbjct: 154 FEYLHSLDLIYRDLKPENLIIDQQ-----GYIQVTDFGFAKRVKGRTWXLCGTPEYLAPE 208
Query: 210 ---HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSS 266
GYN A D W+ GV + E+ GY PF Q +++ R P S
Sbjct: 209 IIISKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHFS 262
Query: 267 EKFRDFIRCCLQKGDPSKRW 286
+D +R LQ D +KR+
Sbjct: 263 SDLKDLLRNLLQV-DLTKRF 281
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 121/260 (46%), Gaps = 37/260 (14%)
Query: 51 QEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELNI 105
Q L Q ++++ LG G+ G V V+HK++ YA+K++ + E I
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 106 LRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKG 165
L+ N P++VK F K + + ++MEY+ G + +++ GR +E + Q++
Sbjct: 95 LQAVNFPFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLT 153
Query: 166 LFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK---------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQ-----GYIQVTDFGFAKRVKGRTWXLCGTPEYLAPE 208
Query: 210 ---HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSS 266
GYN A D W+ GV + E+ GY PF Q +++ R P S
Sbjct: 209 IILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHFS 262
Query: 267 EKFRDFIRCCLQKGDPSKRW 286
+D +R LQ D +KR+
Sbjct: 263 SDLKDLLRNLLQV-DLTKRF 281
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 115/259 (44%), Gaps = 28/259 (10%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALK-----VMQCDRGTPPNPQELNILRQTNSPYIVKC 117
VLG G V K+T L A+K ++ G+ N E+ +L + P IV
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMEN--EIAVLHKIKHPNIVAL 81
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
I+ + G + ++M+ + G L + +G +E + QVL + Y+H IVHR
Sbjct: 82 DDIY-ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHR 140
Query: 178 DIKPANVL---INEK---MEHPCGYSCLYESGEARHRKHG--GYNG----------FAAD 219
D+KP N+L ++E M G S + + G G GY A D
Sbjct: 141 DLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVD 200
Query: 220 IWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQK 279
WS GV L GY PF + F ++ A + P + S+ +DFIR ++K
Sbjct: 201 CWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDI-SDSAKDFIRHLMEK 259
Query: 280 GDPSKRWTASQLLSHPFLA 298
DP KR+T Q L HP++A
Sbjct: 260 -DPEKRFTCEQALQHPWIA 277
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 119/261 (45%), Gaps = 37/261 (14%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELN 104
Q L Q E+++ LG G+ G V V+H +T YA+K++ + E
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKR 93
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
IL+ N P++VK F K + + ++MEY G + +++ GR SE + Q++
Sbjct: 94 ILQAVNFPFLVKLEFSF-KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK--------------- 209
Y+HS ++++RD+KP N++I+++ GY + + G A+ K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMIDQQ-----GYIKVTDFGLAKRVKGRTWXLCGTPEYLAP 207
Query: 210 ----HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
GYN A D W+ GV + E+ GY PF Q +++ R P
Sbjct: 208 EIILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHF 261
Query: 266 SEKFRDFIRCCLQKGDPSKRW 286
S +D +R LQ D +KR+
Sbjct: 262 SSDLKDLLRNLLQV-DLTKRF 281
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 115/259 (44%), Gaps = 28/259 (10%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALK-----VMQCDRGTPPNPQELNILRQTNSPYIVKC 117
VLG G V K+T L A+K ++ G+ N E+ +L + P IV
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMEN--EIAVLHKIKHPNIVAL 81
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
I+ + G + ++M+ + G L + +G +E + QVL + Y+H IVHR
Sbjct: 82 DDIY-ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHR 140
Query: 178 DIKPANVL---INEK---MEHPCGYSCLYESGEARHRKHG--GYNG----------FAAD 219
D+KP N+L ++E M G S + + G G GY A D
Sbjct: 141 DLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVD 200
Query: 220 IWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQK 279
WS GV L GY PF + F ++ A + P + S+ +DFIR ++K
Sbjct: 201 CWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDI-SDSAKDFIRHLMEK 259
Query: 280 GDPSKRWTASQLLSHPFLA 298
DP KR+T Q L HP++A
Sbjct: 260 -DPEKRFTCEQALQHPWIA 277
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 117/267 (43%), Gaps = 46/267 (17%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRH---KQTLALYALKVM------QCDRGTPPNPQELNI 105
G+ E L+VLG G G VF VR T LYA+KV+ Q + T E +
Sbjct: 52 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQV 111
Query: 106 LRQT-NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
L SP++V H F + ++ ++++Y++ G L ++ R R +E + +++
Sbjct: 112 LEHIRQSPFLVTLHYAFQTET-KLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVL 170
Query: 165 GLFYMHSRNIVHRDIKPANVLIN---------------------EKMEHPCG---YSC-- 198
L ++H I++RDIK N+L++ E+ CG Y
Sbjct: 171 ALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPD 230
Query: 199 LYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREP 258
+ G++ H K A D WS GV M EL G PF G++ + I EP
Sbjct: 231 IVRGGDSGHDK-------AVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP 283
Query: 259 PSLPECSSEKFRDFIRCCLQKGDPSKR 285
P P+ S +D I+ L K DP KR
Sbjct: 284 P-YPQEMSALAKDLIQRLLMK-DPKKR 308
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 115/259 (44%), Gaps = 28/259 (10%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALK-----VMQCDRGTPPNPQELNILRQTNSPYIVKC 117
VLG G V K+T L A+K ++ G+ N E+ +L + P IV
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMEN--EIAVLHKIKHPNIVAL 81
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
I+ + G + ++M+ + G L + +G +E + QVL + Y+H IVHR
Sbjct: 82 DDIY-ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHR 140
Query: 178 DIKPANVL---INEK---MEHPCGYSCLYESGEARHRKHG--GYNG----------FAAD 219
D+KP N+L ++E M G S + + G G GY A D
Sbjct: 141 DLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVD 200
Query: 220 IWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQK 279
WS GV L GY PF + F ++ A + P + S+ +DFIR ++K
Sbjct: 201 CWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDI-SDSAKDFIRHLMEK 259
Query: 280 GDPSKRWTASQLLSHPFLA 298
DP KR+T Q L HP++A
Sbjct: 260 -DPEKRFTCEQALQHPWIA 277
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 115/259 (44%), Gaps = 28/259 (10%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALK-----VMQCDRGTPPNPQELNILRQTNSPYIVKC 117
VLG G V K+T L A+K ++ G+ N E+ +L + P IV
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMEN--EIAVLHKIKHPNIVAL 81
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
I+ + G + ++M+ + G L + +G +E + QVL + Y+H IVHR
Sbjct: 82 DDIY-ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHR 140
Query: 178 DIKPANVL---INEK---MEHPCGYSCLYESGEARHRKHG--GYNG----------FAAD 219
D+KP N+L ++E M G S + + G G GY A D
Sbjct: 141 DLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVD 200
Query: 220 IWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQK 279
WS GV L GY PF + F ++ A + P + S+ +DFIR ++K
Sbjct: 201 CWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDI-SDSAKDFIRHLMEK 259
Query: 280 GDPSKRWTASQLLSHPFLA 298
DP KR+T Q L HP++A
Sbjct: 260 -DPEKRFTCEQALQHPWIA 277
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 121/260 (46%), Gaps = 37/260 (14%)
Query: 51 QEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELNI 105
Q L Q ++++ LG G+ G V V+HK++ YA+K++ + E I
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 106 LRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKG 165
L+ N P++VK F K + + ++MEY+ G + +++ GR SE + Q++
Sbjct: 95 LQAVNFPFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 166 LFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK---------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQ-----GYIQVTDFGFAKRVKGRTWXLCGTPEYLAPE 208
Query: 210 ---HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSS 266
GYN A D W+ GV + ++ GY PF Q +++ R P S
Sbjct: 209 IILSKGYNK-AVDWWALGVLIYQMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHFS 262
Query: 267 EKFRDFIRCCLQKGDPSKRW 286
+D +R LQ D +KR+
Sbjct: 263 SDLKDLLRNLLQV-DLTKRF 281
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 119/261 (45%), Gaps = 37/261 (14%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELN 104
Q L Q E+++ LG G+ G V V+H +T YA+K++ + E
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKR 93
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
IL+ N P++VK F K + + ++MEY G + +++ GR SE + Q++
Sbjct: 94 ILQAVNFPFLVKLEFSF-KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK--------------- 209
Y+HS ++++RD+KP N++I+++ GY + + G A+ K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMIDQQ-----GYIQVTDFGLAKRVKGRTWXLCGTPEYLAP 207
Query: 210 ----HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
GYN A D W+ GV + E+ GY PF Q +++ R P
Sbjct: 208 EIILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHF 261
Query: 266 SEKFRDFIRCCLQKGDPSKRW 286
S +D +R LQ D +KR+
Sbjct: 262 SSDLKDLLRNLLQV-DLTKRF 281
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 119/261 (45%), Gaps = 37/261 (14%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELN 104
Q L Q E+++ LG G+ G V V+H +T YA+K++ + E
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
IL+ N P++VK F K + + ++MEY G + +++ GR SE + Q++
Sbjct: 94 ILQAVNFPFLVKLEFSF-KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK--------------- 209
Y+HS ++++RD+KP N++I+++ GY + + G A+ K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMIDQQ-----GYIKVTDFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 210 ----HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
GYN A D W+ GV + E+ GY PF Q +++ R P
Sbjct: 208 EIILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHF 261
Query: 266 SEKFRDFIRCCLQKGDPSKRW 286
S +D +R LQ D +KR+
Sbjct: 262 SSDLKDLLRNLLQV-DLTKRF 281
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 119/261 (45%), Gaps = 37/261 (14%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELN 104
Q L Q E+++ LG G+ G V V+H +T YA+K++ + E
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
IL+ N P++VK F K + + ++MEY G + +++ GR SE + Q++
Sbjct: 94 ILQAVNFPFLVKLEFSF-KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK--------------- 209
Y+HS ++++RD+KP N++I+++ GY + + G A+ K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMIDQQ-----GYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 210 ----HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
GYN A D W+ GV + E+ GY PF Q +++ R P
Sbjct: 208 EIILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHF 261
Query: 266 SEKFRDFIRCCLQKGDPSKRW 286
S +D +R LQ D +KR+
Sbjct: 262 SSDLKDLLRNLLQV-DLTKRF 281
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 116/275 (42%), Gaps = 50/275 (18%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQIFT 122
++LG+G V + HK T YA+K++ G + +E+ LR+ +K I
Sbjct: 23 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT----LKEVDILR 78
Query: 123 KPSGEVSIL---------------MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLF 167
K SG +I+ + M G L Y+ + LSE I R +L+ +
Sbjct: 79 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 138
Query: 168 YMHSRNIVHRDIKPANVLINEKME---HPCGYSCLYESGE-------------------A 205
+H NIVHRD+KP N+L+++ M G+SC + GE +
Sbjct: 139 ALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECS 198
Query: 206 RHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
+ H GY G D+WS GV M L G PF Q LML +
Sbjct: 199 MNDNHPGY-GKEVDMWSTGVIMYTLLAGSPPFWHRKQ-----MLMLRMIMSGNYQFGSPE 252
Query: 266 SEKFRDFIRCCLQKG---DPSKRWTASQLLSHPFL 297
+ + D ++ + + P KR+TA + L+HPF
Sbjct: 253 WDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 287
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 116/275 (42%), Gaps = 50/275 (18%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQIFT 122
++LG+G V + HK T YA+K++ G + +E+ LR+ +K I
Sbjct: 23 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT----LKEVDILR 78
Query: 123 KPSGEVSIL---------------MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLF 167
K SG +I+ + M G L Y+ + LSE I R +L+ +
Sbjct: 79 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 138
Query: 168 YMHSRNIVHRDIKPANVLINEKME---HPCGYSCLYESGE-------------------A 205
+H NIVHRD+KP N+L+++ M G+SC + GE +
Sbjct: 139 ALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECS 198
Query: 206 RHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
+ H GY G D+WS GV M L G PF Q LML +
Sbjct: 199 MNDNHPGY-GKEVDMWSTGVIMYTLLAGSPPFWHRKQ-----MLMLRMIMSGNYQFGSPE 252
Query: 266 SEKFRDFIRCCLQKG---DPSKRWTASQLLSHPFL 297
+ + D ++ + + P KR+TA + L+HPF
Sbjct: 253 WDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 287
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 120/260 (46%), Gaps = 37/260 (14%)
Query: 51 QEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELNI 105
Q L Q ++++ LG G+ G V V+HK++ YA+K++ + E I
Sbjct: 56 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 115
Query: 106 LRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKG 165
L+ N P++VK F K + + ++MEY+ G + +++ GR E + Q++
Sbjct: 116 LQAVNFPFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT 174
Query: 166 LFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK---------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 175 FEYLHSLDLIYRDLKPENLLIDQQ-----GYIQVTDFGFAKRVKGRTWXLCGTPEYLAPE 229
Query: 210 ---HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSS 266
GYN A D W+ GV + E+ GY PF Q +++ R P S
Sbjct: 230 IILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHFS 283
Query: 267 EKFRDFIRCCLQKGDPSKRW 286
+D +R LQ D +KR+
Sbjct: 284 SDLKDLLRNLLQV-DLTKRF 302
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 120/260 (46%), Gaps = 37/260 (14%)
Query: 51 QEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELNI 105
Q L Q ++++ LG G+ G V V+HK++ YA+K++ + E I
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 106 LRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKG 165
L+ N P++VK F K + + ++MEY+ G + +++ GR E + Q++
Sbjct: 95 LQAVNFPFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT 153
Query: 166 LFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK---------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQ-----GYIQVTDFGFAKRVKGRTWXLCGTPEYLAPE 208
Query: 210 ---HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSS 266
GYN A D W+ GV + E+ GY PF Q +++ R P S
Sbjct: 209 IILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHFS 262
Query: 267 EKFRDFIRCCLQKGDPSKRW 286
+D +R LQ D +KR+
Sbjct: 263 SDLKDLLRNLLQV-DLTKRF 281
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 119/261 (45%), Gaps = 37/261 (14%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELN 104
Q L Q E+++ LG G+ G V V+H +T YA+K++ + E
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
IL+ N P++VK F K + + ++MEY+ G + +++ GR E + Q++
Sbjct: 94 ILQAVNFPFLVKLEFSF-KDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL 152
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK--------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQ-----GYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 210 ----HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
GYN A D W+ GV + E+ GY PF Q +++ R P
Sbjct: 208 EIILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHF 261
Query: 266 SEKFRDFIRCCLQKGDPSKRW 286
S +D +R LQ D +KR+
Sbjct: 262 SSDLKDLLRNLLQV-DLTKRF 281
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 116/275 (42%), Gaps = 50/275 (18%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQIFT 122
++LG+G V + HK T YA+K++ G + +E+ LR+ +K I
Sbjct: 10 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT----LKEVDILR 65
Query: 123 KPSGEVSIL---------------MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLF 167
K SG +I+ + M G L Y+ + LSE I R +L+ +
Sbjct: 66 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 125
Query: 168 YMHSRNIVHRDIKPANVLINEKME---HPCGYSCLYESGE-------------------A 205
+H NIVHRD+KP N+L+++ M G+SC + GE +
Sbjct: 126 ALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECS 185
Query: 206 RHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
+ H GY G D+WS GV M L G PF Q LML +
Sbjct: 186 MNDNHPGY-GKEVDMWSTGVIMYTLLAGSPPFWHRKQ-----MLMLRMIMSGNYQFGSPE 239
Query: 266 SEKFRDFIRCCLQKG---DPSKRWTASQLLSHPFL 297
+ + D ++ + + P KR+TA + L+HPF
Sbjct: 240 WDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 274
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 120/260 (46%), Gaps = 37/260 (14%)
Query: 51 QEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELNI 105
Q L Q ++++ LG G+ G V V+HK++ YA+K++ + E I
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 106 LRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKG 165
L+ N P++VK F K + + ++MEY+ G + +++ GR E + Q++
Sbjct: 95 LQAVNFPFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT 153
Query: 166 LFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK---------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQ-----GYIQVTDFGFAKRVKGRTWXLCGTPEYLAPE 208
Query: 210 ---HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSS 266
GYN A D W+ GV + E+ GY PF Q +++ R P S
Sbjct: 209 IILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHFS 262
Query: 267 EKFRDFIRCCLQKGDPSKRW 286
+D +R LQ D +KR+
Sbjct: 263 SDLKDLLRNLLQV-DLTKRF 281
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 29/268 (10%)
Query: 56 LSQL-EKLQVLGQGNGGTVFKVRHKQTLALYALKVM-QCDRGTPPNP---QELNILRQTN 110
LS++ ++++ LG G G V R K T A+K++ + T N +E+ +L+ +
Sbjct: 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLD 94
Query: 111 SPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMH 170
P I+K + F ++ME G L + R + +E I +QVL G+ Y+H
Sbjct: 95 HPNIMKLYDFFEDKRN-YYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLH 153
Query: 171 SRNIVHRDIKPANVLINEKMEHPC------GYSCLYESGEARHRKHGGYNGFA------- 217
NIVHRD+KP N+L+ K + G S ++E+ + + G A
Sbjct: 154 KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKK 213
Query: 218 ----ADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS--SEKFRD 271
D+WS GV + L GY PF G + D L + PE SE +D
Sbjct: 214 YDEKCDVWSIGVILFILLAGYPPF---GGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKD 270
Query: 272 FIRCCLQKGDPSKRWTASQLLSHPFLAD 299
I+ LQ D +R +A Q L HP++ +
Sbjct: 271 LIKQMLQ-FDSQRRISAQQALEHPWIKE 297
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 119/261 (45%), Gaps = 37/261 (14%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELN 104
Q L Q E+++ LG G+ G V V+H +T YA+K++ + E
Sbjct: 35 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
IL+ N P++VK F K + + ++MEY+ G + +++ GR E + Q++
Sbjct: 95 ILQAVNFPFLVKLEFSF-KDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL 153
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK--------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQ-----GYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 208
Query: 210 ----HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
GYN A D W+ GV + E+ GY PF Q +++ R P
Sbjct: 209 EIILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHF 262
Query: 266 SEKFRDFIRCCLQKGDPSKRW 286
S +D +R LQ D +KR+
Sbjct: 263 SSDLKDLLRNLLQV-DLTKRF 282
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 119/261 (45%), Gaps = 37/261 (14%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELN 104
Q L Q E+++ LG G+ G V V+H +T YA+K++ + E
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
IL+ N P++VK F K + + ++MEY+ G + +++ GR E + Q++
Sbjct: 94 ILQAVNFPFLVKLEFSF-KDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL 152
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK--------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQ-----GYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 210 ----HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
GYN A D W+ GV + E+ GY PF Q +++ R P
Sbjct: 208 EIILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHF 261
Query: 266 SEKFRDFIRCCLQKGDPSKRW 286
S +D +R LQ D +KR+
Sbjct: 262 SSDLKDLLRNLLQV-DLTKRF 281
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 120/260 (46%), Gaps = 37/260 (14%)
Query: 51 QEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELNI 105
Q L Q ++++ LG G+ G V V+HK++ YA+K++ + E I
Sbjct: 30 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 89
Query: 106 LRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKG 165
L+ N P++VK F K + + ++MEY+ G + +++ GR E + Q++
Sbjct: 90 LQAVNFPFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT 148
Query: 166 LFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK---------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 149 FEYLHSLDLIYRDLKPENLLIDQQ-----GYIQVTDFGFAKRVKGRTWXLCGTPEYLAPE 203
Query: 210 ---HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSS 266
GYN A D W+ GV + E+ GY PF Q +++ R P S
Sbjct: 204 IILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHFS 257
Query: 267 EKFRDFIRCCLQKGDPSKRW 286
+D +R LQ D +KR+
Sbjct: 258 SDLKDLLRNLLQV-DLTKRF 276
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 120/260 (46%), Gaps = 37/260 (14%)
Query: 51 QEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELNI 105
Q L Q ++++ LG G+ G V V+HK++ YA+K++ + E I
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 106 LRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKG 165
L+ N P++VK F K + + ++MEY+ G + +++ GR E + Q++
Sbjct: 95 LQAVNFPFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT 153
Query: 166 LFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK---------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQ-----GYIQVTDFGFAKRVKGRTWXLCGTPEYLAPE 208
Query: 210 ---HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSS 266
GYN A D W+ GV + E+ GY PF Q +++ R P S
Sbjct: 209 IILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHFS 262
Query: 267 EKFRDFIRCCLQKGDPSKRW 286
+D +R LQ D +KR+
Sbjct: 263 SDLKDLLRNLLQV-DLTKRF 281
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 118/259 (45%), Gaps = 29/259 (11%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELNILRQTNSPYIVKC 117
+VLG+G+ G V + K T A+KV+ Q + T +E+ +L+Q + P I+K
Sbjct: 55 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 114
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
++ F + G ++ E G L + SR R SE I RQVL G+ YMH IVHR
Sbjct: 115 YEFF-EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHR 173
Query: 178 DIKPANVLINEKMEHP------CGYSCLYESGEARHRK------------HGGYNGFAAD 219
D+KP N+L+ K + G S +E+ + K HG Y+ D
Sbjct: 174 DLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDE-KCD 232
Query: 220 IWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFR-EPPSLPECSSEKFRDFIRCCLQ 278
+WS GV + L G PF E D L + + E P + SE +D IR L
Sbjct: 233 VWSTGVILYILLSGCPPF-NGANEYDILKKVEKGKYTFELPQWKKV-SESAKDLIRKMLT 290
Query: 279 KGDPSKRWTASQLLSHPFL 297
PS R +A L H ++
Sbjct: 291 YV-PSMRISARDALDHEWI 308
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 118/259 (45%), Gaps = 29/259 (11%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELNILRQTNSPYIVKC 117
+VLG+G+ G V + K T A+KV+ Q + T +E+ +L+Q + P I+K
Sbjct: 56 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 115
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
++ F + G ++ E G L + SR R SE I RQVL G+ YMH IVHR
Sbjct: 116 YEFF-EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHR 174
Query: 178 DIKPANVLINEKMEHP------CGYSCLYESGEARHRK------------HGGYNGFAAD 219
D+KP N+L+ K + G S +E+ + K HG Y+ D
Sbjct: 175 DLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDE-KCD 233
Query: 220 IWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFR-EPPSLPECSSEKFRDFIRCCLQ 278
+WS GV + L G PF E D L + + E P + SE +D IR L
Sbjct: 234 VWSTGVILYILLSGCPPF-NGANEYDILKKVEKGKYTFELPQWKKV-SESAKDLIRKMLT 291
Query: 279 KGDPSKRWTASQLLSHPFL 297
PS R +A L H ++
Sbjct: 292 YV-PSMRISARDALDHEWI 309
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 118/259 (45%), Gaps = 29/259 (11%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELNILRQTNSPYIVKC 117
+VLG+G+ G V + K T A+KV+ Q + T +E+ +L+Q + P I+K
Sbjct: 32 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 91
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
++ F + G ++ E G L + SR R SE I RQVL G+ YMH IVHR
Sbjct: 92 YEFF-EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHR 150
Query: 178 DIKPANVLINEKMEHP------CGYSCLYESGEARHRK------------HGGYNGFAAD 219
D+KP N+L+ K + G S +E+ + K HG Y+ D
Sbjct: 151 DLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDE-KCD 209
Query: 220 IWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFR-EPPSLPECSSEKFRDFIRCCLQ 278
+WS GV + L G PF E D L + + E P + SE +D IR L
Sbjct: 210 VWSTGVILYILLSGCPPF-NGANEYDILKKVEKGKYTFELPQWKKV-SESAKDLIRKMLT 267
Query: 279 KGDPSKRWTASQLLSHPFL 297
PS R +A L H ++
Sbjct: 268 YV-PSMRISARDALDHEWI 285
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 123/268 (45%), Gaps = 36/268 (13%)
Query: 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-PQELNILRQTNSPYIV 115
+ E ++ +G GN G +R KQ L A+K ++ N +E+ R P IV
Sbjct: 19 DRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIV 78
Query: 116 KCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIV 175
+ ++ P+ ++I+MEY G L + + GR SED +Q++ G+ Y H+ +
Sbjct: 79 RFKEVILTPT-HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQVA 137
Query: 176 HRDIKPANVLIN----------------EKMEHPCGYSCL----YESGEARHRKHGGYNG 215
HRD+K N L++ + H S + Y + E +K Y+G
Sbjct: 138 HRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKE--YDG 195
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDF---LSLMLAICFREPPSL---PECSSEKF 269
AD+WS GVT+ + +G YPF +P + +F + +L + + P + PEC
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLIS 255
Query: 270 RDFIRCCLQKGDPSKRWTASQLLSHPFL 297
R F+ DP+KR + ++ +H +
Sbjct: 256 RIFV------ADPAKRISIPEIRNHEWF 277
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 119/261 (45%), Gaps = 37/261 (14%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELN 104
Q L Q E+++ LG G+ G V V+HK+T YA+K++ + E
Sbjct: 35 AQNTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
I + N P++VK F K + + +++EY G + +++ GR SE + Q++
Sbjct: 95 IQQAVNFPFLVKLEFSF-KDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK--------------- 209
Y+HS ++++RD+KP N+LI+++ GY + + G A+ K
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQ-----GYIKVADFGFAKRVKGRTWXLCGTPEYLAP 208
Query: 210 ----HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
GYN A D W+ GV + E+ GY PF Q +++ R P
Sbjct: 209 EIILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHF 262
Query: 266 SEKFRDFIRCCLQKGDPSKRW 286
S +D +R LQ D +KR+
Sbjct: 263 SSDLKDLLRNLLQV-DLTKRF 282
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 124/268 (46%), Gaps = 36/268 (13%)
Query: 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-PQELNILRQTNSPYIV 115
+ E ++ +G GN G +R KQ+ L A+K ++ N +E+ R P IV
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIV 78
Query: 116 KCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIV 175
+ ++ P+ ++I+MEY G L + + GR SED +Q++ G+ Y H+ +
Sbjct: 79 RFKEVILTPT-HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVC 137
Query: 176 HRDIKPANVLIN----------------EKMEHPCGYSCL----YESGEARHRKHGGYNG 215
HRD+K N L++ + H S + Y + E +K Y+G
Sbjct: 138 HRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKE--YDG 195
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDF---LSLMLAICFREPPSL---PECSSEKF 269
AD+WS GVT+ + +G YPF +P + +F + +L + + P + PEC
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLIS 255
Query: 270 RDFIRCCLQKGDPSKRWTASQLLSHPFL 297
R F+ DP+KR + ++ +H +
Sbjct: 256 RIFV------ADPAKRISIPEIRNHEWF 277
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 124/268 (46%), Gaps = 36/268 (13%)
Query: 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-PQELNILRQTNSPYIV 115
+ E ++ +G GN G +R KQ+ L A+K ++ N +E+ R P IV
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIV 78
Query: 116 KCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIV 175
+ ++ P+ ++I+MEY G L + + GR SED +Q++ G+ Y H+ +
Sbjct: 79 RFKEVILTPT-HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVC 137
Query: 176 HRDIKPANVLIN----------------EKMEHPCGYSCL----YESGEARHRKHGGYNG 215
HRD+K N L++ + H S + Y + E +K Y+G
Sbjct: 138 HRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKE--YDG 195
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDF---LSLMLAICFREPPSL---PECSSEKF 269
AD+WS GVT+ + +G YPF +P + +F + +L + + P + PEC
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLIS 255
Query: 270 RDFIRCCLQKGDPSKRWTASQLLSHPFL 297
R F+ DP+KR + ++ +H +
Sbjct: 256 RIFV------ADPAKRISIPEIRNHEWF 277
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 124/268 (46%), Gaps = 36/268 (13%)
Query: 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-PQELNILRQTNSPYIV 115
+ E ++ +G GN G +R KQ+ L A+K ++ N +E+ R P IV
Sbjct: 18 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIV 77
Query: 116 KCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIV 175
+ ++ P+ ++I+MEY G L + + GR SED +Q++ G+ Y H+ +
Sbjct: 78 RFKEVILTPT-HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVC 136
Query: 176 HRDIKPANVLIN----------------EKMEHPCGYSCL----YESGEARHRKHGGYNG 215
HRD+K N L++ + H S + Y + E +K Y+G
Sbjct: 137 HRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKE--YDG 194
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDF---LSLMLAICFREPPSL---PECSSEKF 269
AD+WS GVT+ + +G YPF +P + +F + +L + + P + PEC
Sbjct: 195 KVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLIS 254
Query: 270 RDFIRCCLQKGDPSKRWTASQLLSHPFL 297
R F+ DP+KR + ++ +H +
Sbjct: 255 RIFV------ADPAKRISIPEIRNHEWF 276
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 37/261 (14%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELN 104
Q L Q E+++ LG G+ G V V+H +T YA+K++ + E
Sbjct: 35 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
IL+ N P++ K F K + + ++MEY G + +++ GR SE + Q++
Sbjct: 95 ILQAVNFPFLTKLEFSF-KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK--------------- 209
Y+HS ++++RD+KP N++I+++ GY + + G A+ K
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMIDQQ-----GYIKVTDFGFAKRVKGRTWXLCGTPEYLAP 208
Query: 210 ----HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
GYN A D W+ GV + E+ GY PF Q +++ R P
Sbjct: 209 EIILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHF 262
Query: 266 SEKFRDFIRCCLQKGDPSKRW 286
S +D +R LQ D +KR+
Sbjct: 263 SSDLKDLLRNLLQV-DLTKRF 282
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 37/261 (14%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELN 104
Q L Q E+++ LG G+ G V V+H +T YA+K++ + E
Sbjct: 35 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
IL+ N P++ K F K + + ++MEY G + +++ GR SE + Q++
Sbjct: 95 ILQAVNFPFLTKLEFSF-KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK--------------- 209
Y+HS ++++RD+KP N++I+++ GY + + G A+ K
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMIDQQ-----GYIKVTDFGFAKRVKGRTWXLCGTPEYLAP 208
Query: 210 ----HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
GYN A D W+ GV + E+ GY PF Q +++ R P
Sbjct: 209 EIILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHF 262
Query: 266 SEKFRDFIRCCLQKGDPSKRW 286
S +D +R LQ D +KR+
Sbjct: 263 SSDLKDLLRNLLQV-DLTKRF 282
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 124/271 (45%), Gaps = 42/271 (15%)
Query: 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-PQELNILRQTNSPYIV 115
+ E ++ +G GN G +R KQ+ L A+K ++ N +E+ R P IV
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIV 78
Query: 116 KCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIV 175
+ ++ P+ ++I+MEY G L + + GR SED +Q++ G+ Y H+ +
Sbjct: 79 RFKEVILTPT-HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVC 137
Query: 176 HRDIKPANVLINEKMEHPC--------GYSC---------------LYESGEARHRKHGG 212
HRD+K N L++ P GYS Y + E +K
Sbjct: 138 HRDLKLENTLLDGS---PAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKE-- 192
Query: 213 YNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDF---LSLMLAICFREPPSL---PECSS 266
Y+G AD+WS GVT+ + +G YPF +P + +F + +L + + P + PEC
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRH 252
Query: 267 EKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297
R F+ DP+KR + ++ +H +
Sbjct: 253 LISRIFV------ADPAKRISIPEIRNHEWF 277
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 37/261 (14%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELN 104
Q L Q E+++ LG G+ G V V+H +T YA+K++ + E
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
IL+ N P++VK F K + + ++MEY G + +++ GR E + Q++
Sbjct: 94 ILQAVNFPFLVKLEFSF-KDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVL 152
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK--------------- 209
Y+HS ++++RD+KP N++I+++ GY + + G A+ K
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMIDQQ-----GYIKVTDFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 210 ----HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
GYN A D W+ GV + E+ GY PF Q +++ R P
Sbjct: 208 EIILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHF 261
Query: 266 SEKFRDFIRCCLQKGDPSKRW 286
S +D +R LQ D +KR+
Sbjct: 262 SSDLKDLLRNLLQV-DLTKRF 281
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 132/296 (44%), Gaps = 60/296 (20%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCD---RGTPPNP-QELNILRQTNS 111
+ + EKL+ +G+G GTVFK ++++T + ALK ++ D G P + +E+ +L++
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 112 PYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHS 171
IV+ H + +++++ E+ D + + G L +I+ + Q+LKGL + HS
Sbjct: 61 KNIVRLHDVLHS-DKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 172 RNIVHRDIKPANVLINEKMEHPCGYSCLYESGEAR-----------------HRKHGGYN 214
RN++HRD+KP N+LIN G L + G AR +R
Sbjct: 120 RNVLHRDLKPQNLLINRN-----GELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLF 174
Query: 215 G-----FAADIWSFGVTMMELYMGYYPFLEPGQEPD-----------------FLSLMLA 252
G + D+WS G EL P PG + D + S+
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAARPLF-PGNDVDDQLKRIFRLLGTPTEEQWPSMTKL 233
Query: 253 ICFREPPSLPECSS---------EKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299
++ P P +S RD ++ L K +P +R +A + L HP+ +D
Sbjct: 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLL-KCNPVQRISAEEALQHPYFSD 288
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 118/259 (45%), Gaps = 29/259 (11%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELNILRQTNSPYIVKC 117
+VLG+G+ G V + K T A+KV+ Q + T +E+ +L+Q + P I+K
Sbjct: 38 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 97
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
++ F + G ++ E G L + SR R SE I RQVL G+ YMH IVHR
Sbjct: 98 YEFF-EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHR 156
Query: 178 DIKPANVLINEKMEHP------CGYSCLYESGEARHRK------------HGGYNGFAAD 219
D+KP N+L+ K + G S +E+ + K HG Y+ D
Sbjct: 157 DLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDE-KCD 215
Query: 220 IWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFR-EPPSLPECSSEKFRDFIRCCLQ 278
+WS GV + L G PF E D L + + E P + SE +D IR L
Sbjct: 216 VWSTGVILYILLSGCPPF-NGANEYDILKKVEKGKYTFELPQWKKV-SESAKDLIRKMLT 273
Query: 279 KGDPSKRWTASQLLSHPFL 297
PS R +A L H ++
Sbjct: 274 YV-PSMRISARDALDHEWI 291
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 83/140 (59%), Gaps = 5/140 (3%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCD---RGTPPNP-QELNILRQTNS 111
+ + EKL+ +G+G GTVFK ++++T + ALK ++ D G P + +E+ +L++
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 112 PYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHS 171
IV+ H + +++++ E+ D + + G L +I+ + Q+LKGL + HS
Sbjct: 61 KNIVRLHDVLHS-DKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 172 RNIVHRDIKPANVLINEKME 191
RN++HRD+KP N+LIN E
Sbjct: 120 RNVLHRDLKPQNLLINRNGE 139
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 116/263 (44%), Gaps = 33/263 (12%)
Query: 61 KLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN--PQELNILRQTNSPYIVKCH 118
+ + +GQG GTV+ T A++ M + E+ ++R+ +P IV
Sbjct: 24 RFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYL 83
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRD 178
+ E+ ++MEY+ GSL V + + E I + R+ L+ L ++HS ++HRD
Sbjct: 84 DSYL-VGDELWVVMEYLAGGSLTDVV-TETCMDEGQIAAVCRECLQALEFLHSNQVIHRD 141
Query: 179 IKPANVLINEKMEHPCGYS----CLYESGEARHRK---------------HGGYNGFAAD 219
IK N+L+ M+ + C + E R Y G D
Sbjct: 142 IKSDNILLG--MDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAY-GPKVD 198
Query: 220 IWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL--PECSSEKFRDFIRCCL 277
IWS G+ +E+ G P+L + P L + I P L PE S FRDF+ CL
Sbjct: 199 IWSLGIMAIEMIEGEPPYL--NENP--LRALYLIATNGTPELQNPEKLSAIFRDFLNRCL 254
Query: 278 QKGDPSKRWTASQLLSHPFLADA 300
+ D KR +A +LL H FL A
Sbjct: 255 EM-DVEKRGSAKELLQHQFLKIA 276
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 117/262 (44%), Gaps = 31/262 (11%)
Query: 61 KLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN--PQELNILRQTNSPYIVKCH 118
+ + +GQG GTV+ T A++ M + E+ ++R+ +P IV
Sbjct: 24 RFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYL 83
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRD 178
+ E+ ++MEY+ GSL V + + E I + R+ L+ L ++HS ++HRD
Sbjct: 84 DSYL-VGDELWVVMEYLAGGSLTDVV-TETCMDEGQIAAVCRECLQALEFLHSNQVIHRD 141
Query: 179 IKPANVLINEKMEHPC-----GYSCLYESGEARHRKHGGYNGFAA-------------DI 220
IK N+L+ M+ G+ +++ + G + A DI
Sbjct: 142 IKSDNILLG--MDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDI 199
Query: 221 WSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL--PECSSEKFRDFIRCCLQ 278
WS G+ +E+ G P+L + P L + I P L PE S FRDF+ CL
Sbjct: 200 WSLGIMAIEMIEGEPPYL--NENP--LRALYLIATNGTPELQNPEKLSAIFRDFLNRCLD 255
Query: 279 KGDPSKRWTASQLLSHPFLADA 300
D KR +A +LL H FL A
Sbjct: 256 M-DVEKRGSAKELLQHQFLKIA 276
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 116/259 (44%), Gaps = 29/259 (11%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELNILRQTNSPYIVKC 117
+VLG+G+ G V + K T A+KV+ Q + T +E+ +L+Q + P I K
Sbjct: 32 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKL 91
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
++ F + G ++ E G L + SR R SE I RQVL G+ Y H IVHR
Sbjct: 92 YEFF-EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNKIVHR 150
Query: 178 DIKPANVLINEKMEHP------CGYSCLYESGEARHRK------------HGGYNGFAAD 219
D+KP N+L+ K + G S +E+ + K HG Y+ D
Sbjct: 151 DLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGTYDE-KCD 209
Query: 220 IWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFR-EPPSLPECSSEKFRDFIRCCLQ 278
+WS GV + L G PF E D L + + E P + SE +D IR L
Sbjct: 210 VWSTGVILYILLSGCPPF-NGANEYDILKKVEKGKYTFELPQWKKV-SESAKDLIRKXLT 267
Query: 279 KGDPSKRWTASQLLSHPFL 297
PS R +A L H ++
Sbjct: 268 YV-PSXRISARDALDHEWI 285
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 117/261 (44%), Gaps = 37/261 (14%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELN 104
Q L Q E+++ LG G+ G V V+H +T YA+K++ + E
Sbjct: 35 AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
IL+ N P++ K F K + + ++MEY G + +++ GR E + Q++
Sbjct: 95 ILQAVNFPFLTKLEFSF-KDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVL 153
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK--------------- 209
Y+HS ++++RD+KP N++I+++ GY + + G A+ K
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMIDQQ-----GYIKVTDFGFAKRVKGRTWXLCGTPEYLAP 208
Query: 210 ----HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
GYN A D W+ GV + E+ GY PF Q +++ R P
Sbjct: 209 EIILSKGYNK-AVDWWALGVLIYEMAAGYPPFF-ADQPIQIYEKIVSGKVR----FPSHF 262
Query: 266 SEKFRDFIRCCLQKGDPSKRW 286
S +D +R LQ D +KR+
Sbjct: 263 SSDLKDLLRNLLQV-DLTKRF 282
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 117/265 (44%), Gaps = 37/265 (13%)
Query: 61 KLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ----ELNILRQTNSPYIVK 116
+ + +GQG GTV+ T A++ M + P + E+ ++R+ +P IV
Sbjct: 24 RFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ--QPKKELIINEILVMRENKNPNIVN 81
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVH 176
+ E+ ++MEY+ GSL V + + E I + R+ L+ L ++HS ++H
Sbjct: 82 YLDSYL-VGDELWVVMEYLAGGSLTDVV-TETCMDEGQIAAVCRECLQALEFLHSNQVIH 139
Query: 177 RDIKPANVLINEKMEHPCGYS----CLYESGEARHRK---------------HGGYNGFA 217
RDIK N+L+ M+ + C + E R Y G
Sbjct: 140 RDIKSDNILLG--MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY-GPK 196
Query: 218 ADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL--PECSSEKFRDFIRC 275
DIWS G+ +E+ G P+L + P L + I P L PE S FRDF+
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYL--NENP--LRALYLIATNGTPELQNPEKLSAIFRDFLNR 252
Query: 276 CLQKGDPSKRWTASQLLSHPFLADA 300
CL D KR +A +LL H FL A
Sbjct: 253 CLDM-DVEKRGSAKELLQHQFLKIA 276
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 116/263 (44%), Gaps = 33/263 (12%)
Query: 61 KLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN--PQELNILRQTNSPYIVKCH 118
+ + +GQG GTV+ T A++ M + E+ ++R+ +P IV
Sbjct: 25 RFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYL 84
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRD 178
+ E+ ++MEY+ GSL V + + E I + R+ L+ L ++HS ++HRD
Sbjct: 85 DSYL-VGDELWVVMEYLAGGSLTDVV-TETCMDEGQIAAVCRECLQALEFLHSNQVIHRD 142
Query: 179 IKPANVLINEKMEHPCGYS----CLYESGEARHRK---------------HGGYNGFAAD 219
IK N+L+ M+ + C + E R Y G D
Sbjct: 143 IKSDNILLG--MDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAY-GPKVD 199
Query: 220 IWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL--PECSSEKFRDFIRCCL 277
IWS G+ +E+ G P+L + P L + I P L PE S FRDF+ CL
Sbjct: 200 IWSLGIMAIEMIEGEPPYL--NENP--LRALYLIATNGTPELQNPEKLSAIFRDFLNRCL 255
Query: 278 QKGDPSKRWTASQLLSHPFLADA 300
+ D KR +A +L+ H FL A
Sbjct: 256 EM-DVEKRGSAKELIQHQFLKIA 277
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 110/257 (42%), Gaps = 30/257 (11%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-----PQELNILRQTNSPYIVKC 117
LG G G V +H+ T A+K++ + + +E+ L+ P+I+K
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+Q+ + PS ++ ++MEY+ G L Y+ GRL E + +Q+L G+ Y H +VHR
Sbjct: 82 YQVISTPS-DIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHR 140
Query: 178 DIKPANVLINEKMEHPC---GYSCLYESGEARHRKHGG-------------YNGFAADIW 221
D+KP NVL++ M G S + GE G Y G DIW
Sbjct: 141 DLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIW 200
Query: 222 SFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL-PECSSEKFRDFIRCCLQKG 280
S GV + L G PF + P + F P L P S ++ LQ
Sbjct: 201 SSGVILYALLCGTLPF-DDDHVPTLFKKICDGIFYTPQYLNPSVIS-----LLKHMLQV- 253
Query: 281 DPSKRWTASQLLSHPFL 297
DP KR T + H +
Sbjct: 254 DPMKRATIKDIREHEWF 270
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 113/268 (42%), Gaps = 33/268 (12%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVM----QCDRGTPPNP-QELNILRQTN 110
L + + LG G G V +V + T +A K + + D+ T Q +++LR
Sbjct: 50 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRH-- 107
Query: 111 SPYIVKCHQIFTKPSGEVSILMEYMDAGSL-EIYVKSRGRLSEDIICTISRQVLKGLFYM 169
P +V H F + E+ ++ E+M G L E ++SED RQV KGL +M
Sbjct: 108 -PTLVNLHDAF-EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM 165
Query: 170 HSRNIVHRDIKPANVLINEKMEHPCGY-------------SCLYESGEAR----HRKHGG 212
H N VH D+KP N++ K + S +G A G
Sbjct: 166 HENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGK 225
Query: 213 YNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSL--MLAICFREPPSLPECSSEKFR 270
G+ D+WS GV L G PF G E D +L + + + S SE +
Sbjct: 226 PVGYYTDMWSVGVLSYILLSGLSPF---GGENDDETLRNVKSCDWNMDDSAFSGISEDGK 282
Query: 271 DFIRCCLQKGDPSKRWTASQLLSHPFLA 298
DFIR L DP+ R T Q L HP+L
Sbjct: 283 DFIRKLLL-ADPNTRMTIHQALEHPWLT 309
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 113/268 (42%), Gaps = 33/268 (12%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVM----QCDRGTPPNP-QELNILRQTN 110
L + + LG G G V +V + T +A K + + D+ T Q +++LR
Sbjct: 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRH-- 213
Query: 111 SPYIVKCHQIFTKPSGEVSILMEYMDAGSL-EIYVKSRGRLSEDIICTISRQVLKGLFYM 169
P +V H F + E+ ++ E+M G L E ++SED RQV KGL +M
Sbjct: 214 -PTLVNLHDAF-EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM 271
Query: 170 HSRNIVHRDIKPANVLINEKMEHPCGY-------------SCLYESGEAR----HRKHGG 212
H N VH D+KP N++ K + S +G A G
Sbjct: 272 HENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGK 331
Query: 213 YNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSL--MLAICFREPPSLPECSSEKFR 270
G+ D+WS GV L G PF G E D +L + + + S SE +
Sbjct: 332 PVGYYTDMWSVGVLSYILLSGLSPF---GGENDDETLRNVKSCDWNMDDSAFSGISEDGK 388
Query: 271 DFIRCCLQKGDPSKRWTASQLLSHPFLA 298
DFIR L DP+ R T Q L HP+L
Sbjct: 389 DFIRKLLL-ADPNTRMTIHQALEHPWLT 415
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 116/263 (44%), Gaps = 33/263 (12%)
Query: 61 KLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN--PQELNILRQTNSPYIVKCH 118
+ + +GQG GTV+ T A++ M + E+ ++R+ +P IV
Sbjct: 25 RFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYL 84
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRD 178
+ E+ ++MEY+ GSL V + + E I + R+ L+ L ++HS ++HR+
Sbjct: 85 DSYL-VGDELWVVMEYLAGGSLTDVV-TETCMDEGQIAAVCRECLQALEFLHSNQVIHRN 142
Query: 179 IKPANVLINEKMEHPCGYS----CLYESGEARHRK---------------HGGYNGFAAD 219
IK N+L+ M+ + C + E R Y G D
Sbjct: 143 IKSDNILLG--MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY-GPKVD 199
Query: 220 IWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL--PECSSEKFRDFIRCCL 277
IWS G+ +E+ G P+L + P L + I P L PE S FRDF+ CL
Sbjct: 200 IWSLGIMAIEMIEGEPPYL--NENP--LRALYLIATNGTPELQNPEKLSAIFRDFLNRCL 255
Query: 278 QKGDPSKRWTASQLLSHPFLADA 300
+ D KR +A +L+ H FL A
Sbjct: 256 EM-DVEKRGSAKELIQHQFLKIA 277
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 119/268 (44%), Gaps = 38/268 (14%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTN 110
L E + +G G V H T + A+K+M D+ T P E+ L+
Sbjct: 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIM--DKNTLGSDLPRIKTEIEALKNLR 66
Query: 111 SPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMH 170
+I + + + + + ++ +++EY G L Y+ S+ RLSE+ + RQ++ + Y+H
Sbjct: 67 HQHICQLYHVL-ETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVH 125
Query: 171 SRNIVHRDIKPANVLINE---------------------KMEHPCGYSCLYESGEARHRK 209
S+ HRD+KP N+L +E ++ CG S Y + E K
Sbjct: 126 SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCG-SLAYAAPELIQGK 184
Query: 210 HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
Y G AD+WS G+ + L G+ PF + D + + R +P+ S
Sbjct: 185 --SYLGSEADVWSMGILLYVLMCGFLPF-----DDDNVMALYKKIMRGKYDVPKWLSPSS 237
Query: 270 RDFIRCCLQKGDPSKRWTASQLLSHPFL 297
++ LQ DP KR + LL+HP++
Sbjct: 238 ILLLQQMLQV-DPKKRISMKNLLNHPWI 264
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 126/275 (45%), Gaps = 51/275 (18%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNI-LRQTNSPYIVKCHQIF 121
QVLG G G V ++ +K+T +ALK++Q P +E+ + R + P+IV+ ++
Sbjct: 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQ---DCPKARREVELHWRASQCPHIVRIVDVY 124
Query: 122 TKPSGE---VSILMEYMDAGSLEIYVKSRGR--LSEDIICTISRQVLKGLFYMHSRNIVH 176
+ I+ME +D G L ++ RG +E I + + + + Y+HS NI H
Sbjct: 125 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 184
Query: 177 RDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFAA------------------ 218
RD+KP N+L K P L + G A ++ +N
Sbjct: 185 RDVKPENLLYTSK--RPNAILKLTDFGFA--KETTSHNSLTTPCYTPYYVAPEVLGPEKY 240
Query: 219 ----DIWSFGVTMMELYMGYYPF-------LEPGQEPDFLSLMLAICFREPPSLPECS-- 265
D+WS GV M L GY PF + PG + + + E P+ PE S
Sbjct: 241 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG-----MKTRIRMGQYEFPN-PEWSEV 294
Query: 266 SEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
SE+ + IR L K +P++R T ++ ++HP++ +
Sbjct: 295 SEEVKMLIRNLL-KTEPTQRMTITEFMNHPWIMQS 328
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 110/274 (40%), Gaps = 46/274 (16%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQ-------CDRGTPPN---PQELNILRQTNSP 112
+ LG G G V ++T A+K++ R P E+ IL++ N P
Sbjct: 22 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 81
Query: 113 YIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSR 172
I+K F + + I++E M+ G L V RL E Q+L + Y+H
Sbjct: 82 CIIKIKNFFD--AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN 139
Query: 173 NIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK----------------------- 209
I+HRD+KP NVL++ + E CL + + H K
Sbjct: 140 GIIHRDLKPENVLLSSQEE-----DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 194
Query: 210 ----HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
GYN A D WS GV + GY PF E + + + + P +
Sbjct: 195 VSVGTAGYNR-AVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 253
Query: 266 SEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299
SEK D ++ L DP R+T + L HP+L D
Sbjct: 254 SEKALDLVKKLLVV-DPKARFTTEEALRHPWLQD 286
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 126/275 (45%), Gaps = 51/275 (18%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNI-LRQTNSPYIVKCHQIF 121
QVLG G G V ++ +K+T +ALK++Q P +E+ + R + P+IV+ ++
Sbjct: 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQ---DCPKARREVELHWRASQCPHIVRIVDVY 80
Query: 122 TKPSGE---VSILMEYMDAGSLEIYVKSRGR--LSEDIICTISRQVLKGLFYMHSRNIVH 176
+ I+ME +D G L ++ RG +E I + + + + Y+HS NI H
Sbjct: 81 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 140
Query: 177 RDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFAA------------------ 218
RD+KP N+L K P L + G A ++ +N
Sbjct: 141 RDVKPENLLYTSK--RPNAILKLTDFGFA--KETTSHNSLTTPCYTPYYVAPEVLGPEKY 196
Query: 219 ----DIWSFGVTMMELYMGYYPF-------LEPGQEPDFLSLMLAICFREPPSLPECS-- 265
D+WS GV M L GY PF + PG + + + E P+ PE S
Sbjct: 197 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG-----MKTRIRMGQYEFPN-PEWSEV 250
Query: 266 SEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
SE+ + IR L K +P++R T ++ ++HP++ +
Sbjct: 251 SEEVKMLIRNLL-KTEPTQRMTITEFMNHPWIMQS 284
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 126/275 (45%), Gaps = 51/275 (18%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNI-LRQTNSPYIVKCHQIF 121
QVLG G G V ++ +K+T +ALK++Q P +E+ + R + P+IV+ ++
Sbjct: 74 QVLGLGINGKVLQIFNKRTQEKFALKMLQ---DCPKARREVELHWRASQCPHIVRIVDVY 130
Query: 122 TKPSGE---VSILMEYMDAGSLEIYVKSRGR--LSEDIICTISRQVLKGLFYMHSRNIVH 176
+ I+ME +D G L ++ RG +E I + + + + Y+HS NI H
Sbjct: 131 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 190
Query: 177 RDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFAA------------------ 218
RD+KP N+L K P L + G A ++ +N
Sbjct: 191 RDVKPENLLYTSK--RPNAILKLTDFGFA--KETTSHNSLTTPCYTPYYVAPEVLGPEKY 246
Query: 219 ----DIWSFGVTMMELYMGYYPF-------LEPGQEPDFLSLMLAICFREPPSLPECS-- 265
D+WS GV M L GY PF + PG + + + E P+ PE S
Sbjct: 247 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG-----MKTRIRMGQYEFPN-PEWSEV 300
Query: 266 SEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
SE+ + IR L K +P++R T ++ ++HP++ +
Sbjct: 301 SEEVKMLIRNLL-KTEPTQRMTITEFMNHPWIMQS 334
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 126/273 (46%), Gaps = 47/273 (17%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNI-LRQTNSPYIVKCHQIF 121
QVLG G G V ++ +K+T +ALK++Q P +E+ + R + P+IV+ ++
Sbjct: 30 QVLGLGINGKVLQIFNKRTQEKFALKMLQ---DCPKARREVELHWRASQCPHIVRIVDVY 86
Query: 122 TKPSGE---VSILMEYMDAGSLEIYVKSRGR--LSEDIICTISRQVLKGLFYMHSRNIVH 176
+ I+ME +D G L ++ RG +E I + + + + Y+HS NI H
Sbjct: 87 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 146
Query: 177 RDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGG------YNGF-------------- 216
RD+KP N+L K P L + G A+ Y +
Sbjct: 147 RDVKPENLLYTSK--RPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 204
Query: 217 AADIWSFGVTMMELYMGYYPF-------LEPGQEPDFLSLMLAICFREPPSLPECS--SE 267
+ D+WS GV M L GY PF + PG + + + E P+ PE S SE
Sbjct: 205 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPG-----MKTRIRMGQYEFPN-PEWSEVSE 258
Query: 268 KFRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
+ + IR L K +P++R T ++ ++HP++ +
Sbjct: 259 EVKMLIRNLL-KTEPTQRMTITEFMNHPWIMQS 290
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 110/274 (40%), Gaps = 46/274 (16%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQ-------CDRGTPPN---PQELNILRQTNSP 112
+ LG G G V ++T A+K++ R P E+ IL++ N P
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 113 YIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSR 172
I+K F + + I++E M+ G L V RL E Q+L + Y+H
Sbjct: 76 CIIKIKNFFD--AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN 133
Query: 173 NIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK----------------------- 209
I+HRD+KP NVL++ + E CL + + H K
Sbjct: 134 GIIHRDLKPENVLLSSQEE-----DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 188
Query: 210 ----HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
GYN A D WS GV + GY PF E + + + + P +
Sbjct: 189 VSVGTAGYNR-AVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 247
Query: 266 SEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299
SEK D ++ L DP R+T + L HP+L D
Sbjct: 248 SEKALDLVKKLLVV-DPKARFTTEEALRHPWLQD 280
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 110/274 (40%), Gaps = 46/274 (16%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQ-------CDRGTPPN---PQELNILRQTNSP 112
+ LG G G V ++T A+K++ R P E+ IL++ N P
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 113 YIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSR 172
I+K F + + I++E M+ G L V RL E Q+L + Y+H
Sbjct: 76 CIIKIKNFFD--AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN 133
Query: 173 NIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK----------------------- 209
I+HRD+KP NVL++ + E CL + + H K
Sbjct: 134 GIIHRDLKPENVLLSSQEE-----DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 188
Query: 210 ----HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
GYN A D WS GV + GY PF E + + + + P +
Sbjct: 189 VSVGTAGYNR-AVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 247
Query: 266 SEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299
SEK D ++ L DP R+T + L HP+L D
Sbjct: 248 SEKALDLVKKLLVV-DPKARFTTEEALRHPWLQD 280
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 126/273 (46%), Gaps = 47/273 (17%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNI-LRQTNSPYIVKCHQIF 121
QVLG G G V ++ +K+T +ALK++Q P +E+ + R + P+IV+ ++
Sbjct: 29 QVLGLGINGKVLQIFNKRTQEKFALKMLQ---DCPKARREVELHWRASQCPHIVRIVDVY 85
Query: 122 TKPSGE---VSILMEYMDAGSLEIYVKSRGR--LSEDIICTISRQVLKGLFYMHSRNIVH 176
+ I+ME +D G L ++ RG +E I + + + + Y+HS NI H
Sbjct: 86 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 145
Query: 177 RDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGG------YNGF-------------- 216
RD+KP N+L K P L + G A+ Y +
Sbjct: 146 RDVKPENLLYTSK--RPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 203
Query: 217 AADIWSFGVTMMELYMGYYPF-------LEPGQEPDFLSLMLAICFREPPSLPECS--SE 267
+ D+WS GV M L GY PF + PG + + + E P+ PE S SE
Sbjct: 204 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPG-----MKTRIRMGQYEFPN-PEWSEVSE 257
Query: 268 KFRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
+ + IR L K +P++R T ++ ++HP++ +
Sbjct: 258 EVKMLIRNLL-KTEPTQRMTITEFMNHPWIMQS 289
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 126/273 (46%), Gaps = 47/273 (17%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNI-LRQTNSPYIVKCHQIF 121
QVLG G G V ++ +K+T +ALK++Q P +E+ + R + P+IV+ ++
Sbjct: 22 QVLGLGINGKVLQIFNKRTQEKFALKMLQ---DCPKARREVELHWRASQCPHIVRIVDVY 78
Query: 122 TKPSGE---VSILMEYMDAGSLEIYVKSRGR--LSEDIICTISRQVLKGLFYMHSRNIVH 176
+ I+ME +D G L ++ RG +E I + + + + Y+HS NI H
Sbjct: 79 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 138
Query: 177 RDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGG------YNGF-------------- 216
RD+KP N+L K P L + G A+ Y +
Sbjct: 139 RDVKPENLLYTSK--RPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPEKYDK 196
Query: 217 AADIWSFGVTMMELYMGYYPF-------LEPGQEPDFLSLMLAICFREPPSLPECS--SE 267
+ D+WS GV M L GY PF + PG + + + E P+ PE S SE
Sbjct: 197 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPG-----MKTRIRMGQYEFPN-PEWSEVSE 250
Query: 268 KFRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
+ + IR L K +P++R T ++ ++HP++ +
Sbjct: 251 EVKMLIRNLL-KTEPTQRMTITEFMNHPWIMQS 282
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 126/273 (46%), Gaps = 47/273 (17%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNI-LRQTNSPYIVKCHQIF 121
QVLG G G V ++ +K+T +ALK++Q P +E+ + R + P+IV+ ++
Sbjct: 28 QVLGLGINGKVLQIFNKRTQEKFALKMLQ---DCPKARREVELHWRASQCPHIVRIVDVY 84
Query: 122 TKPSGE---VSILMEYMDAGSLEIYVKSRGR--LSEDIICTISRQVLKGLFYMHSRNIVH 176
+ I+ME +D G L ++ RG +E I + + + + Y+HS NI H
Sbjct: 85 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 144
Query: 177 RDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGG------YNGF-------------- 216
RD+KP N+L K P L + G A+ Y +
Sbjct: 145 RDVKPENLLYTSK--RPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 202
Query: 217 AADIWSFGVTMMELYMGYYPF-------LEPGQEPDFLSLMLAICFREPPSLPECS--SE 267
+ D+WS GV M L GY PF + PG + + + E P+ PE S SE
Sbjct: 203 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPG-----MKTRIRMGQYEFPN-PEWSEVSE 256
Query: 268 KFRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
+ + IR L K +P++R T ++ ++HP++ +
Sbjct: 257 EVKMLIRNLL-KTEPTQRMTITEFMNHPWIMQS 288
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 126/273 (46%), Gaps = 47/273 (17%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNI-LRQTNSPYIVKCHQIF 121
QVLG G G V ++ +K+T +ALK++Q P +E+ + R + P+IV+ ++
Sbjct: 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQ---DCPKARREVELHWRASQCPHIVRIVDVY 80
Query: 122 TKPSGE---VSILMEYMDAGSLEIYVKSRGR--LSEDIICTISRQVLKGLFYMHSRNIVH 176
+ I+ME +D G L ++ RG +E I + + + + Y+HS NI H
Sbjct: 81 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 140
Query: 177 RDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGG------YNGF-------------- 216
RD+KP N+L K P L + G A+ Y +
Sbjct: 141 RDVKPENLLYTSK--RPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 198
Query: 217 AADIWSFGVTMMELYMGYYPF-------LEPGQEPDFLSLMLAICFREPPSLPECS--SE 267
+ D+WS GV M L GY PF + PG + + + E P+ PE S SE
Sbjct: 199 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPG-----MKTRIRMGQYEFPN-PEWSEVSE 252
Query: 268 KFRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
+ + IR L K +P++R T ++ ++HP++ +
Sbjct: 253 EVKMLIRNLL-KTEPTQRMTITEFMNHPWIMQS 284
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 110/274 (40%), Gaps = 46/274 (16%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQ-------CDRGTPPN---PQELNILRQTNSP 112
+ LG G G V ++T A+K++ R P E+ IL++ N P
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 113 YIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSR 172
I+K F + + I++E M+ G L V RL E Q+L + Y+H
Sbjct: 76 CIIKIKNFFD--AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN 133
Query: 173 NIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK----------------------- 209
I+HRD+KP NVL++ + E CL + + H K
Sbjct: 134 GIIHRDLKPENVLLSSQEE-----DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 188
Query: 210 ----HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
GYN A D WS GV + GY PF E + + + + P +
Sbjct: 189 VSVGTAGYNR-AVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 247
Query: 266 SEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299
SEK D ++ L DP R+T + L HP+L D
Sbjct: 248 SEKALDLVKKLLVV-DPKARFTTEEALRHPWLQD 280
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 110/274 (40%), Gaps = 46/274 (16%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQ-------CDRGTPPN---PQELNILRQTNSP 112
+ LG G G V ++T A+K++ R P E+ IL++ N P
Sbjct: 15 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 74
Query: 113 YIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSR 172
I+K F + + I++E M+ G L V RL E Q+L + Y+H
Sbjct: 75 CIIKIKNFFD--AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN 132
Query: 173 NIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK----------------------- 209
I+HRD+KP NVL++ + E CL + + H K
Sbjct: 133 GIIHRDLKPENVLLSSQEE-----DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 187
Query: 210 ----HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
GYN A D WS GV + GY PF E + + + + P +
Sbjct: 188 VSVGTAGYNR-AVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 246
Query: 266 SEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299
SEK D ++ L DP R+T + L HP+L D
Sbjct: 247 SEKALDLVKKLLVV-DPKARFTTEEALRHPWLQD 279
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 126/273 (46%), Gaps = 47/273 (17%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNI-LRQTNSPYIVKCHQIF 121
QVLG G G V ++ +K+T +ALK++Q P +E+ + R + P+IV+ ++
Sbjct: 22 QVLGLGINGKVLQIFNKRTQEKFALKMLQ---DCPKARREVELHWRASQCPHIVRIVDVY 78
Query: 122 TKPSGE---VSILMEYMDAGSLEIYVKSRGR--LSEDIICTISRQVLKGLFYMHSRNIVH 176
+ I+ME +D G L ++ RG +E I + + + + Y+HS NI H
Sbjct: 79 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 138
Query: 177 RDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGG------YNGF-------------- 216
RD+KP N+L K P L + G A+ Y +
Sbjct: 139 RDVKPENLLYTSK--RPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 196
Query: 217 AADIWSFGVTMMELYMGYYPF-------LEPGQEPDFLSLMLAICFREPPSLPECS--SE 267
+ D+WS GV M L GY PF + PG + + + E P+ PE S SE
Sbjct: 197 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPG-----MKTRIRMGQYEFPN-PEWSEVSE 250
Query: 268 KFRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
+ + IR L K +P++R T ++ ++HP++ +
Sbjct: 251 EVKMLIRNLL-KTEPTQRMTITEFMNHPWIMQS 282
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 126/273 (46%), Gaps = 47/273 (17%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNI-LRQTNSPYIVKCHQIF 121
QVLG G G V ++ +K+T +ALK++Q P +E+ + R + P+IV+ ++
Sbjct: 38 QVLGLGINGKVLQIFNKRTQEKFALKMLQ---DCPKARREVELHWRASQCPHIVRIVDVY 94
Query: 122 TKPSGE---VSILMEYMDAGSLEIYVKSRGR--LSEDIICTISRQVLKGLFYMHSRNIVH 176
+ I+ME +D G L ++ RG +E I + + + + Y+HS NI H
Sbjct: 95 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 154
Query: 177 RDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGG------YNGF-------------- 216
RD+KP N+L K P L + G A+ Y +
Sbjct: 155 RDVKPENLLYTSK--RPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 212
Query: 217 AADIWSFGVTMMELYMGYYPF-------LEPGQEPDFLSLMLAICFREPPSLPECS--SE 267
+ D+WS GV M L GY PF + PG + + + E P+ PE S SE
Sbjct: 213 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPG-----MKTRIRMGQYEFPN-PEWSEVSE 266
Query: 268 KFRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
+ + IR L K +P++R T ++ ++HP++ +
Sbjct: 267 EVKMLIRNLL-KTEPTQRMTITEFMNHPWIMQS 298
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 126/273 (46%), Gaps = 47/273 (17%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNI-LRQTNSPYIVKCHQIF 121
QVLG G G V ++ +K+T +ALK++Q P +E+ + R + P+IV+ ++
Sbjct: 23 QVLGLGINGKVLQIFNKRTQEKFALKMLQ---DCPKARREVELHWRASQCPHIVRIVDVY 79
Query: 122 TKPSGE---VSILMEYMDAGSLEIYVKSRGR--LSEDIICTISRQVLKGLFYMHSRNIVH 176
+ I+ME +D G L ++ RG +E I + + + + Y+HS NI H
Sbjct: 80 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 139
Query: 177 RDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGG------YNGF-------------- 216
RD+KP N+L K P L + G A+ Y +
Sbjct: 140 RDVKPENLLYTSK--RPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 197
Query: 217 AADIWSFGVTMMELYMGYYPF-------LEPGQEPDFLSLMLAICFREPPSLPECS--SE 267
+ D+WS GV M L GY PF + PG + + + E P+ PE S SE
Sbjct: 198 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPG-----MKTRIRMGQYEFPN-PEWSEVSE 251
Query: 268 KFRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
+ + IR L K +P++R T ++ ++HP++ +
Sbjct: 252 EVKMLIRNLL-KTEPTQRMTITEFMNHPWIMQS 283
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 123/271 (45%), Gaps = 35/271 (12%)
Query: 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNIL----RQTNSP 112
LE + LG+G G V K RH + + A+K ++ + + L L R + P
Sbjct: 34 DDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCP 93
Query: 113 YIVKCHQIFTKPSGEVSILMEYMDAGSLEIY--VKSRGR-LSEDIICTISRQVLKGLFYM 169
+ V + + G+V I E D + Y V +G+ + EDI+ I+ ++K L ++
Sbjct: 94 FTVTFYGALFR-EGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL 152
Query: 170 HSR-NIVHRDIKPANVLIN-----------------EKMEHPCGYSCLYESGEARHRKHG 211
HS+ +++HRD+KP+NVLIN + + C R
Sbjct: 153 HSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPEL 212
Query: 212 GYNGFA--ADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREP-PSLP-ECSSE 267
G++ +DIWS G+T +EL + +P+ G F L + EP P LP + S
Sbjct: 213 NQKGYSVKSDIWSLGITXIELAILRFPYDSWGTP--FQQLKQVV--EEPSPQLPADKFSA 268
Query: 268 KFRDFIRCCLQKGDPSKRWTASQLLSHPFLA 298
+F DF CL+K + +R T +L HPF
Sbjct: 269 EFVDFTSQCLKK-NSKERPTYPELXQHPFFT 298
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 122/273 (44%), Gaps = 39/273 (14%)
Query: 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELN----ILRQTNSPY 113
L+ L +G+G G+V K+ HK + + A+K ++ Q L ++R ++ PY
Sbjct: 23 DLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPY 82
Query: 114 IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLS----EDIICTISRQVLKGLFYM 169
IV+ + + G+ I ME M + Y L E+I+ I+ +K L ++
Sbjct: 83 IVQFYGALFR-EGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHL 141
Query: 170 HSR-NIVHRDIKPANVLINEKMEHPC---GYSCLYESGEARHRKHG-------------- 211
I+HRDIKP+N+L++ G S A+ R G
Sbjct: 142 KENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSA 201
Query: 212 ---GYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEK 268
GY+ +D+WS G+T+ EL G +P+ + D L+ ++ +PP L +
Sbjct: 202 SRQGYD-VRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVK---GDPPQLSNSEERE 257
Query: 269 FR----DFIRCCLQKGDPSKRWTASQLLSHPFL 297
F +F+ CL K D SKR +LL HPF+
Sbjct: 258 FSPSFINFVNLCLTK-DESKRPKYKELLKHPFI 289
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 121/280 (43%), Gaps = 44/280 (15%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQ-----CDRGTPPNPQELNILRQ- 108
GL + L+V+G+G+ V VR K+T +YA+KV++ D E ++ Q
Sbjct: 18 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQA 77
Query: 109 TNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFY 168
+N P++V H F S + ++EY++ G L +++ + +L E+ S ++ L Y
Sbjct: 78 SNHPFLVGLHSCFQTES-RLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY 136
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYN-------------- 214
+H R I++RD+K NVL++ + G+ L + G + G
Sbjct: 137 LHERGIIYRDLKLDNVLLDSE-----GHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPE 191
Query: 215 -------GFAADIWSFGVTMMELYMGYYPF--LEPGQEPD--FLSLMLAICFREPPSLPE 263
GF+ D W+ GV M E+ G PF + PD + + + +P
Sbjct: 192 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR 251
Query: 264 CSSEKFRDFIRCCLQKGDPSKRWTA------SQLLSHPFL 297
S K ++ L K DP +R + + HPF
Sbjct: 252 SMSVKAASVLKSFLNK-DPKERLGCLPQTGFADIQGHPFF 290
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 117/253 (46%), Gaps = 27/253 (10%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP--QELNILRQTNSPYIVKCHQIFT 122
+G+G+ G V R K + A+K+M + E+ I+R +V+ ++ +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 123 KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPA 182
E+ +LME++ G+L V S+ RL+E+ I T+ VL+ L Y+H++ ++HRDIK
Sbjct: 113 -VGEELWVLMEFLQGGALTDIV-SQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSD 170
Query: 183 NVL--INEKMEHPCGYSCLYESGEARHRK--------------HGGYNGFAADIWSFGVT 226
++L ++ +++ C S + RK DIWS G+
Sbjct: 171 SILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIM 230
Query: 227 MMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS--SEKFRDFIRCCLQKGDPSK 284
++E+ G P+ + M + PP L S RDF+ L + DP +
Sbjct: 231 VIEMVDGEPPYFSDSP----VQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVR-DPQE 285
Query: 285 RWTASQLLSHPFL 297
R TA +LL HPFL
Sbjct: 286 RATAQELLDHPFL 298
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 122/283 (43%), Gaps = 44/283 (15%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQ-----CDRGTPPNPQELNILRQ- 108
GL + L+V+G+G+ V VR K+T +YA+KV++ D E ++ Q
Sbjct: 7 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQA 66
Query: 109 TNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFY 168
+N P++V H F S + ++EY++ G L +++ + +L E+ S ++ L Y
Sbjct: 67 SNHPFLVGLHSCFQTES-RLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY 125
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYN-------------- 214
+H R I++RD+K NVL++ + G+ L + G + G
Sbjct: 126 LHERGIIYRDLKLDNVLLDSE-----GHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPE 180
Query: 215 -------GFAADIWSFGVTMMELYMGYYPF--LEPGQEPD--FLSLMLAICFREPPSLPE 263
GF+ D W+ GV M E+ G PF + PD + + + +P
Sbjct: 181 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR 240
Query: 264 CSSEKFRDFIRCCLQKGDPSKRWTA------SQLLSHPFLADA 300
S K ++ L K DP +R + + HPF +
Sbjct: 241 SLSVKAASVLKSFLNK-DPKERLGCHPQTGFADIQGHPFFRNV 282
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 135/301 (44%), Gaps = 27/301 (8%)
Query: 20 VRKPRHLVTQLNIPKPVSCPNLVHTEAASYGQEIDGLSQLEKLQVLGQGNGGTVFKVRHK 79
V+ R ++IP P + + H + ++ + K ++LG G G V K
Sbjct: 54 VKSKRTSALAVDIPAPPAPFD--HRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEET 111
Query: 80 QTLALYALKVMQCDRGTPPNPQ---ELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMD 136
T A K+++ RG + E++++ Q + +++ + F + ++ ++MEY+D
Sbjct: 112 ATGLKLAAKIIKT-RGMKDKEEVKNEISVMNQLDHANLIQLYDAF-ESKNDIVLVMEYVD 169
Query: 137 AGSL-EIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVL-INEKMEH-- 192
G L + + L+E +Q+ +G+ +MH I+H D+KP N+L +N +
Sbjct: 170 GGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIK 229
Query: 193 --PCGYSCLYESGEARHRKHG------------GYNGFAADIWSFGVTMMELYMGYYPFL 238
G + Y+ E G + F D+WS GV L G PFL
Sbjct: 230 IIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFL 289
Query: 239 EPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLA 298
+ + L+ +LA + + SE+ ++FI L K + S R +AS+ L HP+L+
Sbjct: 290 -GDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIK-EKSWRISASEALKHPWLS 347
Query: 299 D 299
D
Sbjct: 348 D 348
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 122/283 (43%), Gaps = 44/283 (15%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQ-----CDRGTPPNPQELNILRQ- 108
GL + L+V+G+G+ V VR K+T +YA+KV++ D E ++ Q
Sbjct: 3 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQA 62
Query: 109 TNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFY 168
+N P++V H F S + ++EY++ G L +++ + +L E+ S ++ L Y
Sbjct: 63 SNHPFLVGLHSCFQTES-RLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY 121
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYN-------------- 214
+H R I++RD+K NVL++ + G+ L + G + G
Sbjct: 122 LHERGIIYRDLKLDNVLLDSE-----GHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPE 176
Query: 215 -------GFAADIWSFGVTMMELYMGYYPF--LEPGQEPD--FLSLMLAICFREPPSLPE 263
GF+ D W+ GV M E+ G PF + PD + + + +P
Sbjct: 177 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR 236
Query: 264 CSSEKFRDFIRCCLQKGDPSKRWTA------SQLLSHPFLADA 300
S K ++ L K DP +R + + HPF +
Sbjct: 237 SLSVKAASVLKSFLNK-DPKERLGCHPQTGFADIQGHPFFRNV 278
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 110/274 (40%), Gaps = 46/274 (16%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQ-------CDRGTPPN---PQELNILRQTNSP 112
+ LG G G V ++T A++++ R P E+ IL++ N P
Sbjct: 141 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHP 200
Query: 113 YIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSR 172
I+K F + + I++E M+ G L V RL E Q+L + Y+H
Sbjct: 201 CIIKIKNFFD--AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN 258
Query: 173 NIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK----------------------- 209
I+HRD+KP NVL++ + E CL + + H K
Sbjct: 259 GIIHRDLKPENVLLSSQEE-----DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 313
Query: 210 ----HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
GYN A D WS GV + GY PF E + + + + P +
Sbjct: 314 VSVGTAGYNR-AVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 372
Query: 266 SEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299
SEK D ++ L DP R+T + L HP+L D
Sbjct: 373 SEKALDLVKKLLVV-DPKARFTTEEALRHPWLQD 405
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 110/274 (40%), Gaps = 46/274 (16%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQ-------CDRGTPPN---PQELNILRQTNSP 112
+ LG G G V ++T A++++ R P E+ IL++ N P
Sbjct: 155 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHP 214
Query: 113 YIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSR 172
I+K F + + I++E M+ G L V RL E Q+L + Y+H
Sbjct: 215 CIIKIKNFF--DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN 272
Query: 173 NIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK----------------------- 209
I+HRD+KP NVL++ + E CL + + H K
Sbjct: 273 GIIHRDLKPENVLLSSQEE-----DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 327
Query: 210 ----HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
GYN A D WS GV + GY PF E + + + + P +
Sbjct: 328 VSVGTAGYNR-AVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 386
Query: 266 SEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299
SEK D ++ L DP R+T + L HP+L D
Sbjct: 387 SEKALDLVKKLLVV-DPKARFTTEEALRHPWLQD 419
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 121/280 (43%), Gaps = 44/280 (15%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQ-----CDRGTPPNPQELNILRQ- 108
GL + L+V+G+G+ V VR K+T +YA++V++ D E ++ Q
Sbjct: 50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQA 109
Query: 109 TNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFY 168
+N P++V H F S + ++EY++ G L +++ + +L E+ S ++ L Y
Sbjct: 110 SNHPFLVGLHSCFQTES-RLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY 168
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYN-------------- 214
+H R I++RD+K NVL++ + G+ L + G + G
Sbjct: 169 LHERGIIYRDLKLDNVLLDSE-----GHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPE 223
Query: 215 -------GFAADIWSFGVTMMELYMGYYPF--LEPGQEPD--FLSLMLAICFREPPSLPE 263
GF+ D W+ GV M E+ G PF + PD + + + +P
Sbjct: 224 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR 283
Query: 264 CSSEKFRDFIRCCLQKGDPSKRWTA------SQLLSHPFL 297
S K ++ L K DP +R + + HPF
Sbjct: 284 SLSVKAASVLKSFLNK-DPKERLGCHPQTGFADIQGHPFF 322
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 113/264 (42%), Gaps = 36/264 (13%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQC-----DRGTPPNPQELNILRQTNSPYIVKC 117
++LG+G+ TV R T YA+K+++ + P +E +++ + + P+ VK
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ F + ++ + Y G L Y++ G E + +++ L Y+H + I+HR
Sbjct: 98 YFTF-QDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 178 DIKPANVLINEKM-----EHPCGYSCLYESGEARHRKHGGYNGF-------------AAD 219
D+KP N+L+NE M + ES +AR G + ++D
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSD 216
Query: 220 IWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQK 279
+W+ G + +L G PF G E L+ A + PE K RD + L
Sbjct: 217 LWALGCIIYQLVAGLPPF-RAGNE----GLIFAKIIKLEYDFPEKFFPKARDLVEKLLVL 271
Query: 280 GDPSKRWTASQ------LLSHPFL 297
D +KR + L +HPF
Sbjct: 272 -DATKRLGCEEMEGYGPLKAHPFF 294
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 113/264 (42%), Gaps = 36/264 (13%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQC-----DRGTPPNPQELNILRQTNSPYIVKC 117
++LG+G+ TV R T YA+K+++ + P +E +++ + + P+ VK
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ F + ++ + Y G L Y++ G E + +++ L Y+H + I+HR
Sbjct: 98 YFTF-QDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 178 DIKPANVLINEKM-----EHPCGYSCLYESGEARHRKHGGYNGF-------------AAD 219
D+KP N+L+NE M + ES +AR G + ++D
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 216
Query: 220 IWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQK 279
+W+ G + +L G PF G E L+ A + PE K RD + L
Sbjct: 217 LWALGCIIYQLVAGLPPF-RAGNE----GLIFAKIIKLEYDFPEKFFPKARDLVEKLLVL 271
Query: 280 GDPSKRWTASQ------LLSHPFL 297
D +KR + L +HPF
Sbjct: 272 -DATKRLGCEEMEGYGPLKAHPFF 294
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 90/196 (45%), Gaps = 21/196 (10%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ----ELNILRQTNSPYIVKC 117
L+ +G+GN V RH T A+K++ + P + Q E+ I++ N P IVK
Sbjct: 20 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL 79
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
++ + + ++MEY G + Y+ + GR+ E + RQ++ + Y H + IVHR
Sbjct: 80 FEVI-ETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHR 138
Query: 178 DIKPANVLINEKME---HPCGYSCLYESGEARHRKHGG-------------YNGFAADIW 221
D+K N+L++ M G+S + G G Y+G D+W
Sbjct: 139 DLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVW 198
Query: 222 SFGVTMMELYMGYYPF 237
S GV + L G PF
Sbjct: 199 SLGVILYTLVSGSLPF 214
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 31/209 (14%)
Query: 101 QELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVK----SRGRLSEDIIC 156
+E+++L+Q N P ++K + F + E++I++E DAG L +K + + E +
Sbjct: 81 KEIDLLKQLNHPNVIKYYASFIE-DNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVW 139
Query: 157 TISRQVLKGLFYMHSRNIVHRDIKPANVLIN-------------------EKMEHPCGYS 197
Q+ L +MHSR ++HRDIKPANV I H +
Sbjct: 140 KYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGT 199
Query: 198 CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFRE 257
Y S E H GYN F +DIWS G + E+ PF G + + SL I +
Sbjct: 200 PYYMSPERIHE--NGYN-FKSDIWSLGCLLYEMAALQSPFY--GDKMNLYSLCKKIEQCD 254
Query: 258 PPSLP-ECSSEKFRDFIRCCLQKGDPSKR 285
P LP + SE+ R + C+ DP KR
Sbjct: 255 YPPLPSDHYSEELRQLVNMCINP-DPEKR 282
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 90/196 (45%), Gaps = 21/196 (10%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ----ELNILRQTNSPYIVKC 117
L+ +G+GN V RH T A+K++ + P + Q E+ I++ N P IVK
Sbjct: 17 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL 76
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
++ + + ++MEY G + Y+ + GR+ E + RQ++ + Y H + IVHR
Sbjct: 77 FEVI-ETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHR 135
Query: 178 DIKPANVLINEKME---HPCGYSCLYESGEARHRKHGG-------------YNGFAADIW 221
D+K N+L++ M G+S + G G Y+G D+W
Sbjct: 136 DLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVW 195
Query: 222 SFGVTMMELYMGYYPF 237
S GV + L G PF
Sbjct: 196 SLGVILYTLVSGSLPF 211
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 118/256 (46%), Gaps = 27/256 (10%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP--QELNILRQTNSPYIVKCHQIFT 122
+G+G+ G V K T A+K M + E+ I+R + +V + +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 123 KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPA 182
E+ ++ME+++ G+L V + R++E+ I T+ VL+ L Y+H++ ++HRDIK
Sbjct: 113 V-GDELWVVMEFLEGGALTDIV-THTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSD 170
Query: 183 NVLINE--KMEHPCGYSCLYESGEARHRKHGGYN--------------GFAADIWSFGVT 226
++L+ +++ C S E RK G DIWS G+
Sbjct: 171 SILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIM 230
Query: 227 MMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS--SEKFRDFIRCCLQKGDPSK 284
++E+ G P+ EP L M I PP + + S R F+ L + +PS+
Sbjct: 231 VIEMIDGEPPYF---NEPP-LQAMRRIRDSLPPRVKDLHKVSSVLRGFLDLMLVR-EPSQ 285
Query: 285 RWTASQLLSHPFLADA 300
R TA +LL HPFL A
Sbjct: 286 RATAQELLGHPFLKLA 301
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 118/278 (42%), Gaps = 45/278 (16%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQT----- 109
G+ E ++VLG+G+ G V R K+T LYA+KV++ D + E + +
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLA 80
Query: 110 -NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFY 168
N P++ + F P + +ME+++ G L +++ R E + +++ L +
Sbjct: 81 RNHPFLTQLFCCFQTPD-RLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMF 139
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYN-------------- 214
+H + I++RD+K NVL++ + G+ L + G + G
Sbjct: 140 LHDKGIIYRDLKLDNVLLDHE-----GHCKLADFGMCKEGICNGVTTATFCGTPDYIAPE 194
Query: 215 -------GFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSE 267
G A D W+ GV + E+ G+ PF E E D +L P L E ++
Sbjct: 195 ILQEMLYGPAVDWWAMGVLLYEMLCGHAPF-EAENEDDLFEAILNDEVVYPTWLHEDATG 253
Query: 268 KFRDFIRCCLQKGDPSKRWTA------SQLLSHPFLAD 299
+ F+ +P+ R + +L HPF +
Sbjct: 254 ILKSFM-----TKNPTMRLGSLTQGGEHAILRHPFFKE 286
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 120/268 (44%), Gaps = 33/268 (12%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYA-----LKVMQCDRGTPPNPQELNILRQTNSPYIVK 116
+VLG+G G VF + K T LYA K ++ +G E IL + +S +IV
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS 249
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR----LSEDIICTISRQVLKGLFYMHSR 172
F + ++ ++M M+ G + ++ + E + Q++ GL ++H R
Sbjct: 250 LAYAFETKT-DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 173 NIVHRDIKPANVLINEKME---HPCGYSCLYESGEARHRKHGGYNGFAA----------- 218
NI++RD+KP NVL+++ G + ++G+ + + + G GF A
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF 368
Query: 219 --DIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276
D ++ GVT+ E+ PF G++ + L + + + P+ S +DF
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV-LEQAVTYPDKFSPASKDFCEAL 427
Query: 277 LQKGDPSKRW-----TASQLLSHPFLAD 299
LQK DP KR + L +HP D
Sbjct: 428 LQK-DPEKRLGFRDGSCDGLRTHPLFRD 454
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 127/302 (42%), Gaps = 68/302 (22%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP----QELNILRQTN 110
G+ +K++ +G+G G V+K R+K T + ALK ++ D T P +E+++L++ N
Sbjct: 1 GMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 111 SPYIVKCHQIFTKPSGEVSI-------LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVL 163
P IVK + + + L ++MDA +L + +I + Q+L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALT-------GIPLPLIKSYLFQLL 113
Query: 164 KGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHG------- 211
+GL + HS ++HRD+KP N+LIN + G L + G AR R +
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYTHEVVTLW 168
Query: 212 ----------GYNGFAADIWSFG------VTMMELYMG-------YYPFLEPGQEPDFLS 248
Y A DIWS G VT L+ G + F G + +
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 249 LMLAICFREPPSLPECSSEKFRDFIRCCLQKG----------DPSKRWTASQLLSHPFLA 298
+ PS P+ + + F + + G DP+KR +A L+HPF
Sbjct: 229 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
Query: 299 DA 300
D
Sbjct: 289 DV 290
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 120/268 (44%), Gaps = 33/268 (12%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYA-----LKVMQCDRGTPPNPQELNILRQTNSPYIVK 116
+VLG+G G VF + K T LYA K ++ +G E IL + +S +IV
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS 249
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR----LSEDIICTISRQVLKGLFYMHSR 172
F + ++ ++M M+ G + ++ + E + Q++ GL ++H R
Sbjct: 250 LAYAFETKT-DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 173 NIVHRDIKPANVLINEKME---HPCGYSCLYESGEARHRKHGGYNGFAA----------- 218
NI++RD+KP NVL+++ G + ++G+ + + + G GF A
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF 368
Query: 219 --DIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276
D ++ GVT+ E+ PF G++ + L + + + P+ S +DF
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV-LEQAVTYPDKFSPASKDFCEAL 427
Query: 277 LQKGDPSKRW-----TASQLLSHPFLAD 299
LQK DP KR + L +HP D
Sbjct: 428 LQK-DPEKRLGFRDGSCDGLRTHPLFRD 454
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 120/268 (44%), Gaps = 33/268 (12%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYA-----LKVMQCDRGTPPNPQELNILRQTNSPYIVK 116
+VLG+G G VF + K T LYA K ++ +G E IL + +S +IV
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS 249
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR----LSEDIICTISRQVLKGLFYMHSR 172
F + ++ ++M M+ G + ++ + E + Q++ GL ++H R
Sbjct: 250 LAYAFETKT-DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 173 NIVHRDIKPANVLINEKME---HPCGYSCLYESGEARHRKHGGYNGFAA----------- 218
NI++RD+KP NVL+++ G + ++G+ + + + G GF A
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF 368
Query: 219 --DIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276
D ++ GVT+ E+ PF G++ + L + + + P+ S +DF
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV-LEQAVTYPDKFSPASKDFCEAL 427
Query: 277 LQKGDPSKRW-----TASQLLSHPFLAD 299
LQK DP KR + L +HP D
Sbjct: 428 LQK-DPEKRLGFRDGSCDGLRTHPLFRD 454
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 120/268 (44%), Gaps = 33/268 (12%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYA-----LKVMQCDRGTPPNPQELNILRQTNSPYIVK 116
+VLG+G G VF + K T LYA K ++ +G E IL + +S +IV
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS 249
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR----LSEDIICTISRQVLKGLFYMHSR 172
F + ++ ++M M+ G + ++ + E + Q++ GL ++H R
Sbjct: 250 LAYAFETKT-DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 173 NIVHRDIKPANVLINEKME---HPCGYSCLYESGEARHRKHGGYNGFAA----------- 218
NI++RD+KP NVL+++ G + ++G+ + + + G GF A
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF 368
Query: 219 --DIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276
D ++ GVT+ E+ PF G++ + L + + + P+ S +DF
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV-LEQAVTYPDKFSPASKDFCEAL 427
Query: 277 LQKGDPSKRW-----TASQLLSHPFLAD 299
LQK DP KR + L +HP D
Sbjct: 428 LQK-DPEKRLGFRDGSCDGLRTHPLFRD 454
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 112/259 (43%), Gaps = 27/259 (10%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQIFT 122
+ +G G+ + HK T YA+KV+ + P E+ +LR P I+ ++
Sbjct: 33 ETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEI-LLRYGQHPNIITLKDVYD 91
Query: 123 KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPA 182
V ++ E M G L + + SE + + K + Y+HS+ +VHRD+KP+
Sbjct: 92 D-GKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPS 150
Query: 183 NVLINEKMEHP-CGYSCLYESGEARHRKHG--------------------GYNGFAADIW 221
N+L ++ +P C C + + ++G GY+ DIW
Sbjct: 151 NILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDE-GCDIW 209
Query: 222 SFGVTMMELYMGYYPFLE-PGQEP-DFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQK 279
S G+ + + GY PF P P + L+ + + F SE +D + L
Sbjct: 210 SLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHV 269
Query: 280 GDPSKRWTASQLLSHPFLA 298
DP +R TA Q+L HP++
Sbjct: 270 -DPHQRLTAKQVLQHPWVT 287
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 112/259 (43%), Gaps = 27/259 (10%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQIFT 122
+ +G G+ + HK T YA+KV+ + P E+ +LR P I+ ++
Sbjct: 33 ETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEI-LLRYGQHPNIITLKDVYD 91
Query: 123 KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPA 182
V ++ E M G L + + SE + + K + Y+HS+ +VHRD+KP+
Sbjct: 92 D-GKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPS 150
Query: 183 NVLINEKMEHP-CGYSCLYESGEARHRKHG--------------------GYNGFAADIW 221
N+L ++ +P C C + + ++G GY+ DIW
Sbjct: 151 NILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDE-GCDIW 209
Query: 222 SFGVTMMELYMGYYPFLE-PGQEP-DFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQK 279
S G+ + + GY PF P P + L+ + + F SE +D + L
Sbjct: 210 SLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHV 269
Query: 280 GDPSKRWTASQLLSHPFLA 298
DP +R TA Q+L HP++
Sbjct: 270 -DPHQRLTAKQVLQHPWVT 287
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 116/273 (42%), Gaps = 43/273 (15%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELNILRQTN 110
++ + L++LG+G G V VR K T YA+K+++ + + E +L+ T
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 111 SPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMH 170
P++ F + + +MEY + G L ++ +E+ +++ L Y+H
Sbjct: 64 HPFLTALKYAF-QTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 171 SRNIVHRDIKPANVLINEK--------------------MEHPCGYSCLYESGEARHRKH 210
SR++V+RDIK N+++++ M+ CG + Y + E
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCG-TPEYLAPEVLEDND 181
Query: 211 GGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL-PECSSEKF 269
G A D W GV M E+ G PF E F L+L R P +L PE S
Sbjct: 182 YGR---AVDWWGLGVVMYEMMCGRLPFYNQDHERLF-ELILMEEIRFPRTLSPEAKS--- 234
Query: 270 RDFIRCCLQKGDPSKRW-----TASQLLSHPFL 297
+ L K DP +R A +++ H F
Sbjct: 235 ---LLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 116/273 (42%), Gaps = 43/273 (15%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELNILRQTN 110
++ + L++LG+G G V VR K T YA+K+++ + + E +L+ T
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 111 SPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMH 170
P++ F + + +MEY + G L ++ +E+ +++ L Y+H
Sbjct: 64 HPFLTALKYAF-QTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 171 SRNIVHRDIKPANVLINEK--------------------MEHPCGYSCLYESGEARHRKH 210
SR++V+RDIK N+++++ M+ CG + Y + E
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCG-TPEYLAPEVLEDND 181
Query: 211 GGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL-PECSSEKF 269
G A D W GV M E+ G PF E F L+L R P +L PE S
Sbjct: 182 YGR---AVDWWGLGVVMYEMMCGRLPFYNQDHERLF-ELILMEEIRFPRTLSPEAKS--- 234
Query: 270 RDFIRCCLQKGDPSKRW-----TASQLLSHPFL 297
+ L K DP +R A +++ H F
Sbjct: 235 ---LLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 112/263 (42%), Gaps = 26/263 (9%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELNILRQT 109
L E + LG+G G V+ R KQ+ + ALKV+ Q ++ + +E+ I
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
P I++ + F + V +++EY G++ ++ + E T ++ L Y
Sbjct: 67 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 125
Query: 170 HSRNIVHRDIKPANVLINEKME---HPCGYSCLYESGEARHRK-----------HGGYNG 215
HS+ ++HRDIKP N+L+ E G+SC S G +
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGRMHD 185
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
D+WS GV E +G PF E + R + P+ +E RD I
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPF-----EANTYQETYKRISRVEFTFPDFVTEGARDLISR 240
Query: 276 CLQKGDPSKRWTASQLLSHPFLA 298
L K +PS+R ++L HP++
Sbjct: 241 LL-KHNPSQRPMLREVLEHPWIT 262
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 116/273 (42%), Gaps = 43/273 (15%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELNILRQTN 110
++ + L++LG+G G V VR K T YA+K+++ + + E +L+ T
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 111 SPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMH 170
P++ F + + +MEY + G L ++ +E+ +++ L Y+H
Sbjct: 64 HPFLTALKYAF-QTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 171 SRNIVHRDIKPANVLINEK--------------------MEHPCGYSCLYESGEARHRKH 210
SR++V+RDIK N+++++ M+ CG + Y + E
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCG-TPEYLAPEVLEDND 181
Query: 211 GGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL-PECSSEKF 269
G A D W GV M E+ G PF E F L+L R P +L PE S
Sbjct: 182 YGR---AVDWWGLGVVMYEMMCGRLPFYNQDHERLF-ELILMEEIRFPRTLSPEAKS--- 234
Query: 270 RDFIRCCLQKGDPSKRW-----TASQLLSHPFL 297
+ L K DP +R A +++ H F
Sbjct: 235 ---LLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 122/267 (45%), Gaps = 27/267 (10%)
Query: 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP--QELNILRQTNS 111
D S L+ +G+G+ G V + + L A+K M + E+ I+R
Sbjct: 71 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH 130
Query: 112 PYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHS 171
+V+ + + E+ ++ME+++ G+L V + R++E+ I + VL+ L +H+
Sbjct: 131 ENVVEMYNSYLV-GDELWVVMEFLEGGALTDIV-THTRMNEEQIAAVCLAVLQALSVLHA 188
Query: 172 RNIVHRDIKPANVLINE--KMEHPCGYSCLYESGEARHRKHGGYN--------------G 215
+ ++HRDIK ++L+ +++ C S E RK G
Sbjct: 189 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 248
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS--SEKFRDFI 273
DIWS G+ ++E+ G P+ EP L M I PP L S + F+
Sbjct: 249 PEVDIWSLGIMVIEMVDGEPPYF---NEPP-LKAMKMIRDNLPPRLKNLHKVSPSLKGFL 304
Query: 274 RCCLQKGDPSKRWTASQLLSHPFLADA 300
L + DP++R TA++LL HPFLA A
Sbjct: 305 DRLLVR-DPAQRATAAELLKHPFLAKA 330
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 116/273 (42%), Gaps = 43/273 (15%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELNILRQTN 110
++ + L++LG+G G V VR K T YA+K+++ + + E +L+ T
Sbjct: 9 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 68
Query: 111 SPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMH 170
P++ F + + +MEY + G L ++ +E+ +++ L Y+H
Sbjct: 69 HPFLTALKYAF-QTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 127
Query: 171 SRNIVHRDIKPANVLINEK--------------------MEHPCGYSCLYESGEARHRKH 210
SR++V+RDIK N+++++ M+ CG + Y + E
Sbjct: 128 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCG-TPEYLAPEVLEDND 186
Query: 211 GGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL-PECSSEKF 269
G A D W GV M E+ G PF E F L+L R P +L PE S
Sbjct: 187 YGR---AVDWWGLGVVMYEMMCGRLPFYNQDHERLF-ELILMEEIRFPRTLSPEAKS--- 239
Query: 270 RDFIRCCLQKGDPSKRW-----TASQLLSHPFL 297
+ L K DP +R A +++ H F
Sbjct: 240 ---LLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 269
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 122/267 (45%), Gaps = 27/267 (10%)
Query: 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP--QELNILRQTNS 111
D S L+ +G+G+ G V + + L A+K M + E+ I+R
Sbjct: 28 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH 87
Query: 112 PYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHS 171
+V+ + + E+ ++ME+++ G+L V + R++E+ I + VL+ L +H+
Sbjct: 88 ENVVEMYNSYLV-GDELWVVMEFLEGGALTDIV-THTRMNEEQIAAVCLAVLQALSVLHA 145
Query: 172 RNIVHRDIKPANVLINE--KMEHPCGYSCLYESGEARHRKHGGYN--------------G 215
+ ++HRDIK ++L+ +++ C S E RK G
Sbjct: 146 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 205
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS--SEKFRDFI 273
DIWS G+ ++E+ G P+ EP L M I PP L S + F+
Sbjct: 206 PEVDIWSLGIMVIEMVDGEPPYF---NEPP-LKAMKMIRDNLPPRLKNLHKVSPSLKGFL 261
Query: 274 RCCLQKGDPSKRWTASQLLSHPFLADA 300
L + DP++R TA++LL HPFLA A
Sbjct: 262 DRLLVR-DPAQRATAAELLKHPFLAKA 287
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 114/263 (43%), Gaps = 39/263 (14%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVM-----QCDRGTPPNPQELNILRQTNSPYIVK 116
L+ +G G+ G V+ R + + A+K M Q + +E+ L++ P ++
Sbjct: 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ 118
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVH 176
+ + ++MEY + ++ + L E I ++ L+GL Y+HS N++H
Sbjct: 119 YRGCYLR-EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIH 177
Query: 177 RDIKPANVLINEKMEHPCGYSCLYESGEAR---------------------HRKHGGYNG 215
RD+K N+L++E G L + G A G Y+G
Sbjct: 178 RDVKAGNILLSEP-----GLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDG 232
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS-SEKFRDFIR 274
D+WS G+T +EL P + +S + I E P+L SE FR+F+
Sbjct: 233 -KVDVWSLGITCIELAERKPPLF----NMNAMSALYHIAQNESPALQSGHWSEYFRNFVD 287
Query: 275 CCLQKGDPSKRWTASQLLSHPFL 297
CLQK P R T+ LL H F+
Sbjct: 288 SCLQK-IPQDRPTSEVLLKHRFV 309
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 116/273 (42%), Gaps = 43/273 (15%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELNILRQTN 110
++ + L++LG+G G V VR K T YA+K+++ + + E +L+ T
Sbjct: 7 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 66
Query: 111 SPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMH 170
P++ F + + +MEY + G L ++ +E+ +++ L Y+H
Sbjct: 67 HPFLTALKYAF-QTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 125
Query: 171 SRNIVHRDIKPANVLINEK--------------------MEHPCGYSCLYESGEARHRKH 210
SR++V+RDIK N+++++ M+ CG + Y + E
Sbjct: 126 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG-TPEYLAPEVLEDND 184
Query: 211 GGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL-PECSSEKF 269
G A D W GV M E+ G PF E F L+L R P +L PE S
Sbjct: 185 YGR---AVDWWGLGVVMYEMMCGRLPFYNQDHERLF-ELILMEEIRFPRTLSPEAKS--- 237
Query: 270 RDFIRCCLQKGDPSKRW-----TASQLLSHPFL 297
+ L K DP +R A +++ H F
Sbjct: 238 ---LLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 267
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 116/273 (42%), Gaps = 43/273 (15%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELNILRQTN 110
++ + L++LG+G G V VR K T YA+K+++ + + E +L+ T
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 111 SPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMH 170
P++ F + + +MEY + G L ++ +E+ +++ L Y+H
Sbjct: 64 HPFLTALKYAF-QTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 171 SRNIVHRDIKPANVLINEK--------------------MEHPCGYSCLYESGEARHRKH 210
SR++V+RDIK N+++++ M+ CG + Y + E
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG-TPEYLAPEVLEDND 181
Query: 211 GGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL-PECSSEKF 269
G A D W GV M E+ G PF E F L+L R P +L PE S
Sbjct: 182 YGR---AVDWWGLGVVMYEMMCGRLPFYNQDHERLF-ELILMEEIRFPRTLSPEAKS--- 234
Query: 270 RDFIRCCLQKGDPSKRW-----TASQLLSHPFL 297
+ L K DP +R A +++ H F
Sbjct: 235 ---LLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 122/267 (45%), Gaps = 27/267 (10%)
Query: 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP--QELNILRQTNS 111
D S L+ +G+G+ G V + + L A+K M + E+ I+R
Sbjct: 26 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH 85
Query: 112 PYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHS 171
+V+ + + E+ ++ME+++ G+L V + R++E+ I + VL+ L +H+
Sbjct: 86 ENVVEMYNSYLV-GDELWVVMEFLEGGALTDIV-THTRMNEEQIAAVCLAVLQALSVLHA 143
Query: 172 RNIVHRDIKPANVLINE--KMEHPCGYSCLYESGEARHRKHGGYN--------------G 215
+ ++HRDIK ++L+ +++ C S E RK G
Sbjct: 144 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 203
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS--SEKFRDFI 273
DIWS G+ ++E+ G P+ EP L M I PP L S + F+
Sbjct: 204 PEVDIWSLGIMVIEMVDGEPPYF---NEPP-LKAMKMIRDNLPPRLKNLHKVSPSLKGFL 259
Query: 274 RCCLQKGDPSKRWTASQLLSHPFLADA 300
L + DP++R TA++LL HPFLA A
Sbjct: 260 DRLLVR-DPAQRATAAELLKHPFLAKA 285
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 122/267 (45%), Gaps = 27/267 (10%)
Query: 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP--QELNILRQTNS 111
D S L+ +G+G+ G V + + L A+K M + E+ I+R
Sbjct: 21 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH 80
Query: 112 PYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHS 171
+V+ + + E+ ++ME+++ G+L V + R++E+ I + VL+ L +H+
Sbjct: 81 ENVVEMYNSYLV-GDELWVVMEFLEGGALTDIV-THTRMNEEQIAAVCLAVLQALSVLHA 138
Query: 172 RNIVHRDIKPANVLINE--KMEHPCGYSCLYESGEARHRKHGGYN--------------G 215
+ ++HRDIK ++L+ +++ C S E RK G
Sbjct: 139 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 198
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS--SEKFRDFI 273
DIWS G+ ++E+ G P+ EP L M I PP L S + F+
Sbjct: 199 PEVDIWSLGIMVIEMVDGEPPYF---NEPP-LKAMKMIRDNLPPRLKNLHKVSPSLKGFL 254
Query: 274 RCCLQKGDPSKRWTASQLLSHPFLADA 300
L + DP++R TA++LL HPFLA A
Sbjct: 255 DRLLVR-DPAQRATAAELLKHPFLAKA 280
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 107/254 (42%), Gaps = 28/254 (11%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-----PQELNILRQTNSPYIVKCHQ 119
LG G G V H+ T A+K++ + + +E+ L+ P+I+K +Q
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 120 IFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDI 179
+ + P+ + ++MEY+ G L Y+ GR+ E + +Q+L + Y H +VHRD+
Sbjct: 79 VISTPT-DFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDL 137
Query: 180 KPANVLINEKMEHPC---GYSCLYESGEARHRKHGG-------------YNGFAADIWSF 223
KP NVL++ M G S + GE G Y G DIWS
Sbjct: 138 KPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSC 197
Query: 224 GVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPS 283
GV + L G PF + F + + + +PE + + LQ DP
Sbjct: 198 GVILYALLCGTLPFDDEHVPTLFKKIRGGVFY-----IPEYLNRSVATLLMHMLQV-DPL 251
Query: 284 KRWTASQLLSHPFL 297
KR T + H +
Sbjct: 252 KRATIKDIREHEWF 265
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 122/267 (45%), Gaps = 27/267 (10%)
Query: 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP--QELNILRQTNS 111
D S L+ +G+G+ G V + + L A+K M + E+ I+R
Sbjct: 17 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH 76
Query: 112 PYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHS 171
+V+ + + E+ ++ME+++ G+L V + R++E+ I + VL+ L +H+
Sbjct: 77 ENVVEMYNSYLV-GDELWVVMEFLEGGALTDIV-THTRMNEEQIAAVCLAVLQALSVLHA 134
Query: 172 RNIVHRDIKPANVLINE--KMEHPCGYSCLYESGEARHRKHGGYN--------------G 215
+ ++HRDIK ++L+ +++ C S E RK G
Sbjct: 135 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 194
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS--SEKFRDFI 273
DIWS G+ ++E+ G P+ EP L M I PP L S + F+
Sbjct: 195 PEVDIWSLGIMVIEMVDGEPPYF---NEPP-LKAMKMIRDNLPPRLKNLHKVSPSLKGFL 250
Query: 274 RCCLQKGDPSKRWTASQLLSHPFLADA 300
L + DP++R TA++LL HPFLA A
Sbjct: 251 DRLLVR-DPAQRATAAELLKHPFLAKA 276
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 113/263 (42%), Gaps = 39/263 (14%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVM-----QCDRGTPPNPQELNILRQTNSPYIVK 116
L+ +G G+ G V+ R + + A+K M Q + +E+ L++ P ++
Sbjct: 20 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ 79
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVH 176
+ + ++MEY + ++ + L E I ++ L+GL Y+HS N++H
Sbjct: 80 YRGCYLR-EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIH 138
Query: 177 RDIKPANVLINEKMEHPCGYSCLYESGEAR---------------------HRKHGGYNG 215
RD+K N+L++E G L + G A G Y+G
Sbjct: 139 RDVKAGNILLSEP-----GLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDG 193
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS-SEKFRDFIR 274
D+WS G+T +EL P +S + I E P+L SE FR+F+
Sbjct: 194 -KVDVWSLGITCIELAERKPPLFNMNA----MSALYHIAQNESPALQSGHWSEYFRNFVD 248
Query: 275 CCLQKGDPSKRWTASQLLSHPFL 297
CLQK P R T+ LL H F+
Sbjct: 249 SCLQKI-PQDRPTSEVLLKHRFV 270
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 121/268 (45%), Gaps = 29/268 (10%)
Query: 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP--QELNILRQTNS 111
D S L+ +G+G+ G V + + L A+K M + E+ I+R
Sbjct: 148 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH 207
Query: 112 PYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHS 171
+V+ + + E+ ++ME+++ G+L V + R++E+ I + VL+ L +H+
Sbjct: 208 ENVVEMYNSYLV-GDELWVVMEFLEGGALTDIV-THTRMNEEQIAAVCLAVLQALSVLHA 265
Query: 172 RNIVHRDIKPANVLINEKME---HPCGYSCLYESGEARHRKHGGYN-------------- 214
+ ++HRDIK ++L+ G+ C S E RK
Sbjct: 266 QGVIHRDIKSDSILLTHDGRVKLSDFGF-CAQVSKEVPRRKXLVGTPYWMAPELISRLPY 324
Query: 215 GFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS--SEKFRDF 272
G DIWS G+ ++E+ G P+ EP L M I PP L S + F
Sbjct: 325 GPEVDIWSLGIMVIEMVDGEPPYF---NEPP-LKAMKMIRDNLPPRLKNLHKVSPSLKGF 380
Query: 273 IRCCLQKGDPSKRWTASQLLSHPFLADA 300
+ L + DP++R TA++LL HPFLA A
Sbjct: 381 LDRLLVR-DPAQRATAAELLKHPFLAKA 407
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 107/254 (42%), Gaps = 28/254 (11%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-----PQELNILRQTNSPYIVKCHQ 119
LG G G V H+ T A+K++ + + +E+ L+ P+I+K +Q
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 120 IFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDI 179
+ + P+ + ++MEY+ G L Y+ GR+ E + +Q+L + Y H +VHRD+
Sbjct: 79 VISTPT-DFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDL 137
Query: 180 KPANVLINEKMEHPC---GYSCLYESGEARHRKHGG-------------YNGFAADIWSF 223
KP NVL++ M G S + GE G Y G DIWS
Sbjct: 138 KPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSC 197
Query: 224 GVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPS 283
GV + L G PF + F + + + +PE + + LQ DP
Sbjct: 198 GVILYALLCGTLPFDDEHVPTLFKKIRGGVFY-----IPEYLNRSVATLLMHMLQV-DPL 251
Query: 284 KRWTASQLLSHPFL 297
KR T + H +
Sbjct: 252 KRATIKDIREHEWF 265
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 116/273 (42%), Gaps = 43/273 (15%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELNILRQTN 110
++ + L++LG+G G V VR K T YA+K+++ + + E +L+ T
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 111 SPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMH 170
P++ F + + +MEY + G L ++ +E+ +++ L Y+H
Sbjct: 64 HPFLTALKYAF-QTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 171 SRNIVHRDIKPANVLINEK--------------------MEHPCGYSCLYESGEARHRKH 210
SR++V+RDIK N+++++ M+ CG + Y + E
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG-TPEYLAPEVLEDND 181
Query: 211 GGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL-PECSSEKF 269
G A D W GV M E+ G PF E F L+L R P +L PE S
Sbjct: 182 YGR---AVDWWGLGVVMYEMMCGRLPFYNQDHERLF-ELILMEEIRFPRTLSPEAKS--- 234
Query: 270 RDFIRCCLQKGDPSKRW-----TASQLLSHPFL 297
+ L K DP +R A +++ H F
Sbjct: 235 ---LLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 116/288 (40%), Gaps = 53/288 (18%)
Query: 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALK-VMQCDRGTPPNPQELNILRQTNSPYIV 115
S E++ VLGQG G V K R+ YA+K + + E+ +L N Y+V
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVV 65
Query: 116 KCH------QIFTKPSGEVS------ILMEYMDAGSLEIYVKSRG-RLSEDIICTISRQV 162
+ + + F KP V I MEY + G+L + S D + RQ+
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQI 125
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY-------------------------- 196
L+ L Y+HS+ I+HRD+KP N+ I+E G
Sbjct: 126 LEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 197 -------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSL 249
+ +Y + E G YN D++S G+ E+ YPF + + L
Sbjct: 186 NLTSAIGTAMYVATEVLDGT-GHYNE-KIDMYSLGIIFFEM---IYPFSTGMERVNILKK 240
Query: 250 MLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297
+ ++ PP + + + IR + DP+KR A LL+ +L
Sbjct: 241 LRSVSIEFPPDFDDNKMKVEKKIIRLLIDH-DPNKRPGARTLLNSGWL 287
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 111/257 (43%), Gaps = 29/257 (11%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ----ELNILRQTNSPYIVKC 117
L+ +G+GN V RH T A+K++ + + Q E+ I++ N P IVK
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
++ + + ++MEY G + Y+ + GR+ E RQ++ + Y H + IVHR
Sbjct: 79 FEVI-ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHR 137
Query: 178 DIKPANVLINEKME---HPCGYSCLYESGEARHRKHGG-------------YNGFAADIW 221
D+K N+L++ M G+S + G G Y+G D+W
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVW 197
Query: 222 SFGVTMMELYMGYYPFLEPGQE-PDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKG 280
S GV + L G PF GQ + +L +R P + + F+
Sbjct: 198 SLGVILYTLVSGSLPF--DGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLIL----- 250
Query: 281 DPSKRWTASQLLSHPFL 297
+PSKR T Q++ ++
Sbjct: 251 NPSKRGTLEQIMKDRWM 267
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 118/251 (47%), Gaps = 37/251 (14%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDR-----GTPPNPQE---LNILRQTNSPYI 114
+++G+G G V+ R T +YA+K + R G E L+++ + P+I
Sbjct: 195 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI 254
Query: 115 VKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNI 174
V F P ++S +++ M+ G L ++ G SE + + +++ GL +MH+R +
Sbjct: 255 VCMSYAFHTPD-KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFV 313
Query: 175 VHRDIKPANVLINEKME---HPCGYSCLYESGEARHRKHGGYNGFA-------------A 218
V+RD+KPAN+L++E G +C + S + H G + A A
Sbjct: 314 VYRDLKPANILLDEHGHVRISDLGLACDF-SKKKPHASVGTHGYMAPEVLQKGVAYDSSA 372
Query: 219 DIWSFGVTMMELYMGYYPF----LEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIR 274
D +S G + +L G+ PF + E D ++L +A+ LP+ S + R +
Sbjct: 373 DWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV------ELPDSFSPELRSLLE 426
Query: 275 CCLQKGDPSKR 285
LQ+ D ++R
Sbjct: 427 GLLQR-DVNRR 436
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 118/251 (47%), Gaps = 37/251 (14%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDR-----GTPPNPQE---LNILRQTNSPYI 114
+++G+G G V+ R T +YA+K + R G E L+++ + P+I
Sbjct: 195 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI 254
Query: 115 VKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNI 174
V F P ++S +++ M+ G L ++ G SE + + +++ GL +MH+R +
Sbjct: 255 VCMSYAFHTPD-KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFV 313
Query: 175 VHRDIKPANVLINEKME---HPCGYSCLYESGEARHRKHGGYNGFA-------------A 218
V+RD+KPAN+L++E G +C + S + H G + A A
Sbjct: 314 VYRDLKPANILLDEHGHVRISDLGLACDF-SKKKPHASVGTHGYMAPEVLQKGVAYDSSA 372
Query: 219 DIWSFGVTMMELYMGYYPF----LEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIR 274
D +S G + +L G+ PF + E D ++L +A+ LP+ S + R +
Sbjct: 373 DWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV------ELPDSFSPELRSLLE 426
Query: 275 CCLQKGDPSKR 285
LQ+ D ++R
Sbjct: 427 GLLQR-DVNRR 436
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 111/257 (43%), Gaps = 29/257 (11%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ----ELNILRQTNSPYIVKC 117
L+ +G+GN V RH T A+K++ + + Q E+ I++ N P IVK
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
++ + + ++MEY G + Y+ + GR+ E RQ++ + Y H + IVHR
Sbjct: 79 FEVI-ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHR 137
Query: 178 DIKPANVLINEKME---HPCGYSCLYESGEARHRKHGG-------------YNGFAADIW 221
D+K N+L++ M G+S + G G Y+G D+W
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVW 197
Query: 222 SFGVTMMELYMGYYPFLEPGQE-PDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKG 280
S GV + L G PF GQ + +L +R P + + F+
Sbjct: 198 SLGVILYTLVSGSLPF--DGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLIL----- 250
Query: 281 DPSKRWTASQLLSHPFL 297
+PSKR T Q++ ++
Sbjct: 251 NPSKRGTLEQIMKDRWM 267
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 118/251 (47%), Gaps = 37/251 (14%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDR-----GTPPNPQE---LNILRQTNSPYI 114
+++G+G G V+ R T +YA+K + R G E L+++ + P+I
Sbjct: 194 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI 253
Query: 115 VKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNI 174
V F P ++S +++ M+ G L ++ G SE + + +++ GL +MH+R +
Sbjct: 254 VCMSYAFHTPD-KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFV 312
Query: 175 VHRDIKPANVLINEKME---HPCGYSCLYESGEARHRKHGGYNGFA-------------A 218
V+RD+KPAN+L++E G +C + S + H G + A A
Sbjct: 313 VYRDLKPANILLDEHGHVRISDLGLACDF-SKKKPHASVGTHGYMAPEVLQKGVAYDSSA 371
Query: 219 DIWSFGVTMMELYMGYYPF----LEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIR 274
D +S G + +L G+ PF + E D ++L +A+ LP+ S + R +
Sbjct: 372 DWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV------ELPDSFSPELRSLLE 425
Query: 275 CCLQKGDPSKR 285
LQ+ D ++R
Sbjct: 426 GLLQR-DVNRR 435
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 111/257 (43%), Gaps = 29/257 (11%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ----ELNILRQTNSPYIVKC 117
L+ +G+GN V RH T A+K++ + + Q E+ I++ N P IVK
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
++ + + ++MEY G + Y+ + GR+ E RQ++ + Y H + IVHR
Sbjct: 79 FEVI-ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHR 137
Query: 178 DIKPANVLINEKME---HPCGYSCLYESGEARHRKHGG-------------YNGFAADIW 221
D+K N+L++ M G+S + G G Y+G D+W
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVW 197
Query: 222 SFGVTMMELYMGYYPFLEPGQE-PDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKG 280
S GV + L G PF GQ + +L +R P + + F+
Sbjct: 198 SLGVILYTLVSGSLPF--DGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLIL----- 250
Query: 281 DPSKRWTASQLLSHPFL 297
+PSKR T Q++ ++
Sbjct: 251 NPSKRGTLEQIMKDRWM 267
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 118/251 (47%), Gaps = 37/251 (14%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDR-----GTPPNPQE---LNILRQTNSPYI 114
+++G+G G V+ R T +YA+K + R G E L+++ + P+I
Sbjct: 195 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI 254
Query: 115 VKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNI 174
V F P ++S +++ M+ G L ++ G SE + + +++ GL +MH+R +
Sbjct: 255 VCMSYAFHTPD-KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFV 313
Query: 175 VHRDIKPANVLINEKME---HPCGYSCLYESGEARHRKHGGYNGFA-------------A 218
V+RD+KPAN+L++E G +C + S + H G + A A
Sbjct: 314 VYRDLKPANILLDEHGHVRISDLGLACDF-SKKKPHASVGTHGYMAPEVLQKGVAYDSSA 372
Query: 219 DIWSFGVTMMELYMGYYPF----LEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIR 274
D +S G + +L G+ PF + E D ++L +A+ LP+ S + R +
Sbjct: 373 DWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV------ELPDSFSPELRSLLE 426
Query: 275 CCLQKGDPSKR 285
LQ+ D ++R
Sbjct: 427 GLLQR-DVNRR 436
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 112/264 (42%), Gaps = 36/264 (13%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQC-----DRGTPPNPQELNILRQTNSPYIVKC 117
++LG+G+ TV R T YA+K+++ + P +E +++ + + P+ VK
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ F + ++ + Y G L Y++ G E + +++ L Y+H + I+HR
Sbjct: 99 YFTF-QDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 157
Query: 178 DIKPANVLINEKM-----EHPCGYSCLYESGEARHRKHGGYNGF-------------AAD 219
D+KP N+L+NE M + ES +AR G + ++D
Sbjct: 158 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSD 217
Query: 220 IWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQK 279
+W+ G + +L G PF G E L+ + PE K RD + L
Sbjct: 218 LWALGCIIYQLVAGLPPF-RAGNE----YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVL 272
Query: 280 GDPSKRWTASQ------LLSHPFL 297
D +KR + L +HPF
Sbjct: 273 -DATKRLGCEEMEGYGPLKAHPFF 295
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 112/264 (42%), Gaps = 36/264 (13%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQC-----DRGTPPNPQELNILRQTNSPYIVKC 117
++LG+G+ TV R T YA+K+++ + P +E +++ + + P+ VK
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ F + ++ + Y G L Y++ G E + +++ L Y+H + I+HR
Sbjct: 96 YFTF-QDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 178 DIKPANVLINEKM-----EHPCGYSCLYESGEARHRKHGGYNGF-------------AAD 219
D+KP N+L+NE M + ES +AR G + ++D
Sbjct: 155 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSD 214
Query: 220 IWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQK 279
+W+ G + +L G PF G E L+ + PE K RD + L
Sbjct: 215 LWALGCIIYQLVAGLPPF-RAGNE----YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVL 269
Query: 280 GDPSKRWTASQ------LLSHPFL 297
D +KR + L +HPF
Sbjct: 270 -DATKRLGCEEMEGYGPLKAHPFF 292
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 127/304 (41%), Gaps = 68/304 (22%)
Query: 53 IDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP----QELNILRQ 108
+ + +K++ +G+G G V+K R+K T + ALK ++ D T P +E+++L++
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 109 TNSPYIVKCHQIFTKPSGEVSI-------LMEYMDAGSLEIYVKSRGRLSEDIICTISRQ 161
N P IVK + + + L ++MDA +L + +I + Q
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALT-------GIPLPLIKSYLFQ 114
Query: 162 VLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHG----- 211
+L+GL + HS ++HRD+KP N+LIN + G L + G AR R +
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVVT 169
Query: 212 ------------GYNGFAADIWSFG------VTMMELYMG-------YYPFLEPGQEPDF 246
Y A DIWS G VT L+ G + F G +
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 229
Query: 247 LSLMLAICFREPPSLPECSSEKFRDFIRCCLQKG----------DPSKRWTASQLLSHPF 296
+ + PS P+ + + F + + G DP+KR +A L+HPF
Sbjct: 230 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 289
Query: 297 LADA 300
D
Sbjct: 290 FQDV 293
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 112/264 (42%), Gaps = 36/264 (13%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQC-----DRGTPPNPQELNILRQTNSPYIVKC 117
++LG+G+ TV R T YA+K+++ + P +E +++ + + P+ VK
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ F + ++ + Y G L Y++ G E + +++ L Y+H + I+HR
Sbjct: 98 YFTF-QDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 178 DIKPANVLINEKM-----EHPCGYSCLYESGEARHRKHGGYNGF-------------AAD 219
D+KP N+L+NE M + ES +AR G + ++D
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 216
Query: 220 IWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQK 279
+W+ G + +L G PF G E L+ + PE K RD + L
Sbjct: 217 LWALGCIIYQLVAGLPPF-RAGNE----YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVL 271
Query: 280 GDPSKRWTASQ------LLSHPFL 297
D +KR + L +HPF
Sbjct: 272 -DATKRLGCEEMEGYGPLKAHPFF 294
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 126/302 (41%), Gaps = 68/302 (22%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP----QELNILRQTN 110
+ +K++ +G+G G V+K R+K T + ALK ++ D T P +E+++L++ N
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 111 SPYIVKCHQIFTKPSGEVSI-------LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVL 163
P IVK + + + L ++MDA +L + +I + Q+L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALT-------GIPLPLIKSYLFQLL 113
Query: 164 KGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHG------- 211
+GL + HS ++HRD+KP N+LIN + G L + G AR R +
Sbjct: 114 QGLAFCHSHRVLHRDLKPENLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVVTLW 168
Query: 212 ----------GYNGFAADIWSFG------VTMMELYMG-------YYPFLEPGQEPDFLS 248
Y A DIWS G VT L+ G + F G + +
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 249 LMLAICFREPPSLPECSSEKFRDFIRCCLQKG----------DPSKRWTASQLLSHPFLA 298
+ PS P+ + + F + + G DP+KR +A L+HPF
Sbjct: 229 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
Query: 299 DA 300
D
Sbjct: 289 DV 290
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 99/222 (44%), Gaps = 33/222 (14%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQT------ 109
L+ L VLG+G+ G V K T LYA+K+++ D + E ++ +
Sbjct: 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG 399
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
P++ + H F + + +MEY++ G L +++ GR E + ++ GLF++
Sbjct: 400 KPPFLTQLHSCF-QTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFL 458
Query: 170 HSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYN--------------- 214
S+ I++RD+K NV+++ + G+ + + G + G
Sbjct: 459 QSKGIIYRDLKLDNVMLDSE-----GHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEI 513
Query: 215 ------GFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLM 250
G + D W+FGV + E+ G PF ++ F S+M
Sbjct: 514 IAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM 555
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 99/222 (44%), Gaps = 33/222 (14%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQ------T 109
L+ L VLG+G+ G V K T LYA+K+++ D + E ++ +
Sbjct: 18 LTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLD 77
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
P++ + H F + + +MEY++ G L +++ G+ E + ++ GLF++
Sbjct: 78 KPPFLTQLHSCF-QTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFL 136
Query: 170 HSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYN--------------- 214
H R I++RD+K NV+++ + G+ + + G + G
Sbjct: 137 HKRGIIYRDLKLDNVMLDSE-----GHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEI 191
Query: 215 ------GFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLM 250
G + D W++GV + E+ G PF ++ F S+M
Sbjct: 192 IAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIM 233
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 112/264 (42%), Gaps = 36/264 (13%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQC-----DRGTPPNPQELNILRQTNSPYIVKC 117
++LG+G+ TV R T YA+K+++ + P +E +++ + + P+ VK
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ F + ++ + Y G L Y++ G E + +++ L Y+H + I+HR
Sbjct: 96 YFTF-QDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 178 DIKPANVLINEKM-----EHPCGYSCLYESGEARHRKHGGYNGF-------------AAD 219
D+KP N+L+NE M + ES +AR G + ++D
Sbjct: 155 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 214
Query: 220 IWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQK 279
+W+ G + +L G PF G E L+ + PE K RD + L
Sbjct: 215 LWALGCIIYQLVAGLPPF-RAGNE----YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVL 269
Query: 280 GDPSKRWTASQ------LLSHPFL 297
D +KR + L +HPF
Sbjct: 270 -DATKRLGCEEMEGYGPLKAHPFF 292
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 126/301 (41%), Gaps = 68/301 (22%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP----QELNILRQTNS 111
+ +K++ +G+G G V+K R+K T + ALK ++ D T P +E+++L++ N
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 112 PYIVKCHQIFTKPSGEVSI-------LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
P IVK + + + L ++MDA +L + +I + Q+L+
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALT-------GIPLPLIKSYLFQLLQ 121
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHG-------- 211
GL + HS ++HRD+KP N+LIN + G L + G AR R +
Sbjct: 122 GLAFCHSHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYTHEVVTLWY 176
Query: 212 ---------GYNGFAADIWSFG------VTMMELYMG-------YYPFLEPGQEPDFLSL 249
Y A DIWS G VT L+ G + F G + +
Sbjct: 177 RAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 236
Query: 250 MLAICFREPPSLPECSSEKFRDFIRCCLQKG----------DPSKRWTASQLLSHPFLAD 299
+ PS P+ + + F + + G DP+KR +A L+HPF D
Sbjct: 237 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 296
Query: 300 A 300
Sbjct: 297 V 297
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 127/304 (41%), Gaps = 68/304 (22%)
Query: 53 IDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP----QELNILRQ 108
+ + +K++ +G+G G V+K R+K T + ALK ++ D T P +E+++L++
Sbjct: 1 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 109 TNSPYIVKCHQIFTKPSGEVSI-------LMEYMDAGSLEIYVKSRGRLSEDIICTISRQ 161
N P IVK + + + L ++MDA +L + +I + Q
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALT-------GIPLPLIKSYLFQ 113
Query: 162 VLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHG----- 211
+L+GL + HS ++HRD+KP N+LIN + G L + G AR R +
Sbjct: 114 LLQGLAFCHSHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVVT 168
Query: 212 ------------GYNGFAADIWSFG------VTMMELYMG-------YYPFLEPGQEPDF 246
Y A DIWS G VT L+ G + F G +
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 228
Query: 247 LSLMLAICFREPPSLPECSSEKFRDFIRCCLQKG----------DPSKRWTASQLLSHPF 296
+ + PS P+ + + F + + G DP+KR +A L+HPF
Sbjct: 229 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 288
Query: 297 LADA 300
D
Sbjct: 289 FQDV 292
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 112/264 (42%), Gaps = 36/264 (13%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQC-----DRGTPPNPQELNILRQTNSPYIVKC 117
++LG+G+ TV R T YA+K+++ + P +E +++ + + P+ VK
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ F + ++ + Y G L Y++ G E + +++ L Y+H + I+HR
Sbjct: 98 YFTF-QDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 178 DIKPANVLINEKM-----EHPCGYSCLYESGEARHRKHGGYNGF-------------AAD 219
D+KP N+L+NE M + ES +AR G + ++D
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 216
Query: 220 IWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQK 279
+W+ G + +L G PF G E L+ + PE K RD + L
Sbjct: 217 LWALGCIIYQLVAGLPPF-RAGNE----YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVL 271
Query: 280 GDPSKRWTASQ------LLSHPFL 297
D +KR + L +HPF
Sbjct: 272 -DATKRLGCEEMEGYGPLKAHPFF 294
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 112/264 (42%), Gaps = 36/264 (13%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQC-----DRGTPPNPQELNILRQTNSPYIVKC 117
++LG+G+ TV R T YA+K+++ + P +E +++ + + P+ VK
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ F + ++ + Y G L Y++ G E + +++ L Y+H + I+HR
Sbjct: 99 YFTF-QDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 157
Query: 178 DIKPANVLINEKM-----EHPCGYSCLYESGEARHRKHGGYNGF-------------AAD 219
D+KP N+L+NE M + ES +AR G + ++D
Sbjct: 158 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 217
Query: 220 IWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQK 279
+W+ G + +L G PF G E L+ + PE K RD + L
Sbjct: 218 LWALGCIIYQLVAGLPPF-RAGNE----YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVL 272
Query: 280 GDPSKRWTASQ------LLSHPFL 297
D +KR + L +HPF
Sbjct: 273 -DATKRLGCEEMEGYGPLKAHPFF 295
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 112/264 (42%), Gaps = 36/264 (13%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQC-----DRGTPPNPQELNILRQTNSPYIVKC 117
++LG+G+ TV R T YA+K+++ + P +E +++ + + P+ VK
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ F + ++ + Y G L Y++ G E + +++ L Y+H + I+HR
Sbjct: 96 YFTF-QDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 178 DIKPANVLINEKM-----EHPCGYSCLYESGEARHRKHGGYNGF-------------AAD 219
D+KP N+L+NE M + ES +AR G + ++D
Sbjct: 155 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 214
Query: 220 IWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQK 279
+W+ G + +L G PF G E L+ + PE K RD + L
Sbjct: 215 LWALGCIIYQLVAGLPPF-RAGNE----YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVL 269
Query: 280 GDPSKRWTASQ------LLSHPFL 297
D +KR + L +HPF
Sbjct: 270 -DATKRLGCEEMEGYGPLKAHPFF 292
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 129/296 (43%), Gaps = 58/296 (19%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP----QELNILRQTNS 111
+ +K++ +G+G G V+K R+K T + ALK ++ D T P +E+++L++ N
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 112 PYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR--LSEDIICTISRQVLKGLFYM 169
P IVK + ++ ++ E++D L+ ++ + + +I + Q+L+GL +
Sbjct: 65 PNIVKLLDVI-HTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 170 HSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHG------------- 211
HS ++HRD+KP N+LIN + G L + G AR R +
Sbjct: 123 HSHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 212 ----GYNGFAADIWSFG------VTMMELYMG-------YYPFLEPGQEPDFLSLMLAIC 254
Y A DIWS G VT L+ G + F G + + +
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 255 FREPPSLPECSSEKFRDFIRCCLQKG----------DPSKRWTASQLLSHPFLADA 300
PS P+ + + F + + G DP+KR +A L+HPF D
Sbjct: 238 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 293
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 113/264 (42%), Gaps = 36/264 (13%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQC-----DRGTPPNPQELNILRQTNSPYIVKC 117
++LG+G+ TV R T YA+K+++ + P +E +++ + + P+ VK
Sbjct: 16 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 75
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ F + ++ + Y G L Y++ G E + +++ L Y+H + I+HR
Sbjct: 76 YFTF-QDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 134
Query: 178 DIKPANVLINEKM-----EHPCGYSCLYESGEARHRKHGGYNGF-------------AAD 219
D+KP N+L+NE M + ES +AR G + ++D
Sbjct: 135 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 194
Query: 220 IWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQK 279
+W+ G + +L G PF G E ++ + + PE K RD + L
Sbjct: 195 LWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIKLEY----DFPEKFFPKARDLVEKLLVL 249
Query: 280 GDPSKRWTASQ------LLSHPFL 297
D +KR + L +HPF
Sbjct: 250 -DATKRLGCEEMEGYGPLKAHPFF 272
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 112/264 (42%), Gaps = 36/264 (13%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQC-----DRGTPPNPQELNILRQTNSPYIVKC 117
++LG+G+ TV R T YA+K+++ + P +E +++ + + P+ VK
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ F + ++ + Y G L Y++ G E + +++ L Y+H + I+HR
Sbjct: 98 YFTF-QDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 178 DIKPANVLINEKM-----EHPCGYSCLYESGEARHRKHGGYNGF-------------AAD 219
D+KP N+L+NE M + ES +AR G + ++D
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 216
Query: 220 IWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQK 279
+W+ G + +L G PF G E L+ + PE K RD + L
Sbjct: 217 LWALGCIIYQLVAGLPPF-RAGNE----YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVL 271
Query: 280 GDPSKRWTASQ------LLSHPFL 297
D +KR + L +HPF
Sbjct: 272 -DATKRLGCEEMEGYGPLKAHPFF 294
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 127/304 (41%), Gaps = 68/304 (22%)
Query: 53 IDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP----QELNILRQ 108
+ + +K++ +G+G G V+K R+K T + ALK ++ D T P +E+++L++
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 109 TNSPYIVKCHQIFTKPSGEVSI-------LMEYMDAGSLEIYVKSRGRLSEDIICTISRQ 161
N P IVK + + + L ++MDA +L + +I + Q
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALT-------GIPLPLIKSYLFQ 114
Query: 162 VLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHG----- 211
+L+GL + HS ++HRD+KP N+LIN + G L + G AR R +
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPENLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVVT 169
Query: 212 ------------GYNGFAADIWSFG------VTMMELYMG-------YYPFLEPGQEPDF 246
Y A DIWS G VT L+ G + F G +
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 229
Query: 247 LSLMLAICFREPPSLPECSSEKFRDFIRCCLQKG----------DPSKRWTASQLLSHPF 296
+ + PS P+ + + F + + G DP+KR +A L+HPF
Sbjct: 230 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 289
Query: 297 LADA 300
D
Sbjct: 290 FQDV 293
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 112/264 (42%), Gaps = 36/264 (13%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQC-----DRGTPPNPQELNILRQTNSPYIVKC 117
++LG+G+ TV R T YA+K+++ + P +E +++ + + P+ VK
Sbjct: 20 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 79
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ F + ++ + Y G L Y++ G E + +++ L Y+H + I+HR
Sbjct: 80 YFTF-QDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 138
Query: 178 DIKPANVLINEKM-----EHPCGYSCLYESGEARHRKHGGYNGF-------------AAD 219
D+KP N+L+NE M + ES +AR G + ++D
Sbjct: 139 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 198
Query: 220 IWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQK 279
+W+ G + +L G PF G E L+ + PE K RD + L
Sbjct: 199 LWALGCIIYQLVAGLPPF-RAGNE----YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVL 253
Query: 280 GDPSKRWTASQ------LLSHPFL 297
D +KR + L +HPF
Sbjct: 254 -DATKRLGCEEMEGYGPLKAHPFF 276
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 112/264 (42%), Gaps = 36/264 (13%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQC-----DRGTPPNPQELNILRQTNSPYIVKC 117
++LG+G+ TV R T YA+K+++ + P +E +++ + + P+ VK
Sbjct: 14 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 73
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ F + ++ + Y G L Y++ G E + +++ L Y+H + I+HR
Sbjct: 74 YFTF-QDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 132
Query: 178 DIKPANVLINEKM-----EHPCGYSCLYESGEARHRKHGGYNGF-------------AAD 219
D+KP N+L+NE M + ES +AR G + ++D
Sbjct: 133 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 192
Query: 220 IWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQK 279
+W+ G + +L G PF G E L+ + PE K RD + L
Sbjct: 193 LWALGCIIYQLVAGLPPF-RAGNE----YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVL 247
Query: 280 GDPSKRWTASQ------LLSHPFL 297
D +KR + L +HPF
Sbjct: 248 -DATKRLGCEEMEGYGPLKAHPFF 270
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 126/301 (41%), Gaps = 68/301 (22%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP----QELNILRQTNS 111
+ +K++ +G+G G V+K R+K T + ALK ++ D T P +E+++L++ N
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 112 PYIVKCHQIFTKPSGEVSI-------LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
P IVK + + + L ++MDA +L + +I + Q+L+
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALT-------GIPLPLIKSYLFQLLQ 118
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHG-------- 211
GL + HS ++HRD+KP N+LIN + G L + G AR R +
Sbjct: 119 GLAFCHSHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYTHEVVTLWY 173
Query: 212 ---------GYNGFAADIWSFG------VTMMELYMG-------YYPFLEPGQEPDFLSL 249
Y A DIWS G VT L+ G + F G + +
Sbjct: 174 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 233
Query: 250 MLAICFREPPSLPECSSEKFRDFIRCCLQKG----------DPSKRWTASQLLSHPFLAD 299
+ PS P+ + + F + + G DP+KR +A L+HPF D
Sbjct: 234 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 293
Query: 300 A 300
Sbjct: 294 V 294
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 126/301 (41%), Gaps = 68/301 (22%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP----QELNILRQTNS 111
+ +K++ +G+G G V+K R+K T + ALK ++ D T P +E+++L++ N
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 112 PYIVKCHQIFTKPSGEVSI-------LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
P IVK + + + L ++MDA +L + +I + Q+L+
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALT-------GIPLPLIKSYLFQLLQ 116
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHG-------- 211
GL + HS ++HRD+KP N+LIN + G L + G AR R +
Sbjct: 117 GLAFCHSHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVVTLWY 171
Query: 212 ---------GYNGFAADIWSFG------VTMMELYMG-------YYPFLEPGQEPDFLSL 249
Y A DIWS G VT L+ G + F G + +
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 231
Query: 250 MLAICFREPPSLPECSSEKFRDFIRCCLQKG----------DPSKRWTASQLLSHPFLAD 299
+ PS P+ + + F + + G DP+KR +A L+HPF D
Sbjct: 232 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
Query: 300 A 300
Sbjct: 292 V 292
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 126/301 (41%), Gaps = 68/301 (22%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP----QELNILRQTNS 111
+ +K++ +G+G G V+K R+K T + ALK ++ D T P +E+++L++ N
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 112 PYIVKCHQIFTKPSGEVSI-------LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
P IVK + + + L ++MDA +L + +I + Q+L+
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALT-------GIPLPLIKSYLFQLLQ 115
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHG-------- 211
GL + HS ++HRD+KP N+LIN + G L + G AR R +
Sbjct: 116 GLAFCHSHRVLHRDLKPENLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVVTLWY 170
Query: 212 ---------GYNGFAADIWSFG------VTMMELYMG-------YYPFLEPGQEPDFLSL 249
Y A DIWS G VT L+ G + F G + +
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 230
Query: 250 MLAICFREPPSLPECSSEKFRDFIRCCLQKG----------DPSKRWTASQLLSHPFLAD 299
+ PS P+ + + F + + G DP+KR +A L+HPF D
Sbjct: 231 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
Query: 300 A 300
Sbjct: 291 V 291
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 126/301 (41%), Gaps = 68/301 (22%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP----QELNILRQTNS 111
+ +K++ +G+G G V+K R+K T + ALK ++ D T P +E+++L++ N
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 112 PYIVKCHQIFTKPSGEVSI-------LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
P IVK + + + L ++MDA +L + +I + Q+L+
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALT-------GIPLPLIKSYLFQLLQ 116
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHG-------- 211
GL + HS ++HRD+KP N+LIN + G L + G AR R +
Sbjct: 117 GLAFCHSHRVLHRDLKPENLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVVTLWY 171
Query: 212 ---------GYNGFAADIWSFG------VTMMELYMG-------YYPFLEPGQEPDFLSL 249
Y A DIWS G VT L+ G + F G + +
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 231
Query: 250 MLAICFREPPSLPECSSEKFRDFIRCCLQKG----------DPSKRWTASQLLSHPFLAD 299
+ PS P+ + + F + + G DP+KR +A L+HPF D
Sbjct: 232 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
Query: 300 A 300
Sbjct: 292 V 292
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 112/264 (42%), Gaps = 36/264 (13%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQC-----DRGTPPNPQELNILRQTNSPYIVKC 117
++LG+G+ TV R T YA+K+++ + P +E +++ + + P+ VK
Sbjct: 15 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 74
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ F + ++ + Y G L Y++ G E + +++ L Y+H + I+HR
Sbjct: 75 YFTF-QDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 133
Query: 178 DIKPANVLINEKM-----EHPCGYSCLYESGEARHRKHGGYNGF-------------AAD 219
D+KP N+L+NE M + ES +AR G + ++D
Sbjct: 134 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 193
Query: 220 IWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQK 279
+W+ G + +L G PF G E L+ + PE K RD + L
Sbjct: 194 LWALGCIIYQLVAGLPPF-RAGNE----YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVL 248
Query: 280 GDPSKRWTASQ------LLSHPFL 297
D +KR + L +HPF
Sbjct: 249 -DATKRLGCEEMEGYGPLKAHPFF 271
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 127/304 (41%), Gaps = 68/304 (22%)
Query: 53 IDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP----QELNILRQ 108
+ + +K++ +G+G G V+K R+K T + ALK ++ D T P +E+++L++
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 109 TNSPYIVKCHQIFTKPSGEVSI-------LMEYMDAGSLEIYVKSRGRLSEDIICTISRQ 161
N P IVK + + + L ++MDA +L + +I + Q
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALT-------GIPLPLIKSYLFQ 114
Query: 162 VLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHG----- 211
+L+GL + HS ++HRD+KP N+LIN + G L + G AR R +
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVVT 169
Query: 212 ------------GYNGFAADIWSFG------VTMMELYMG-------YYPFLEPGQEPDF 246
Y A DIWS G VT L+ G + F G +
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 229
Query: 247 LSLMLAICFREPPSLPECSSEKFRDFIRCCLQKG----------DPSKRWTASQLLSHPF 296
+ + PS P+ + + F + + G DP+KR +A L+HPF
Sbjct: 230 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 289
Query: 297 LADA 300
D
Sbjct: 290 FQDV 293
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 112/264 (42%), Gaps = 36/264 (13%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQC-----DRGTPPNPQELNILRQTNSPYIVKC 117
++LG+G+ TV R T YA+K+++ + P +E +++ + + P+ VK
Sbjct: 13 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 72
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ F + ++ + Y G L Y++ G E + +++ L Y+H + I+HR
Sbjct: 73 YFTF-QDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 131
Query: 178 DIKPANVLINEKM-----EHPCGYSCLYESGEARHRKHGGYNGF-------------AAD 219
D+KP N+L+NE M + ES +AR G + ++D
Sbjct: 132 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 191
Query: 220 IWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQK 279
+W+ G + +L G PF G E L+ + PE K RD + L
Sbjct: 192 LWALGCIIYQLVAGLPPF-RAGNE----YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVL 246
Query: 280 GDPSKRWTASQ------LLSHPFL 297
D +KR + L +HPF
Sbjct: 247 -DATKRLGCEEMEGYGPLKAHPFF 269
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 112/264 (42%), Gaps = 36/264 (13%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQC-----DRGTPPNPQELNILRQTNSPYIVKC 117
++LG+G+ TV R T YA+K+++ + P +E +++ + + P+ VK
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ F + ++ + Y G L Y++ G E + +++ L Y+H + I+HR
Sbjct: 95 YFTF-QDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 153
Query: 178 DIKPANVLINEKM-----EHPCGYSCLYESGEARHRKHGGYNGF-------------AAD 219
D+KP N+L+NE M + ES +AR G + ++D
Sbjct: 154 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSD 213
Query: 220 IWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQK 279
+W+ G + +L G PF G E L+ + PE K RD + L
Sbjct: 214 LWALGCIIYQLVAGLPPF-RAGNE----YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVL 268
Query: 280 GDPSKRWTASQ------LLSHPFL 297
D +KR + L +HPF
Sbjct: 269 -DATKRLGCEEMEGYGPLKAHPFF 291
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 99/222 (44%), Gaps = 33/222 (14%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQT------ 109
L+ L VLG+G+ G V K T LYA+K+++ D + E ++ +
Sbjct: 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG 78
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
P++ + H F + + +MEY++ G L +++ GR E + ++ GLF++
Sbjct: 79 KPPFLTQLHSCF-QTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFL 137
Query: 170 HSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYN--------------- 214
S+ I++RD+K NV+++ + G+ + + G + G
Sbjct: 138 QSKGIIYRDLKLDNVMLDSE-----GHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEI 192
Query: 215 ------GFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLM 250
G + D W+FGV + E+ G PF ++ F S+M
Sbjct: 193 IAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM 234
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 111/257 (43%), Gaps = 29/257 (11%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ----ELNILRQTNSPYIVKC 117
L+ +G+GN V RH T A++++ + + Q E+ I++ N P IVK
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
++ + + ++MEY G + Y+ + GR+ E RQ++ + Y H + IVHR
Sbjct: 79 FEVI-ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHR 137
Query: 178 DIKPANVLINEKME---HPCGYSCLYESGEARHRKHGG-------------YNGFAADIW 221
D+K N+L++ M G+S + G G Y+G D+W
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVW 197
Query: 222 SFGVTMMELYMGYYPFLEPGQE-PDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKG 280
S GV + L G PF GQ + +L +R P + + F+
Sbjct: 198 SLGVILYTLVSGSLPF--DGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLIL----- 250
Query: 281 DPSKRWTASQLLSHPFL 297
+PSKR T Q++ ++
Sbjct: 251 NPSKRGTLEQIMKDRWM 267
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 126/301 (41%), Gaps = 68/301 (22%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP----QELNILRQTNS 111
+ +K++ +G+G G V+K R+K T + ALK ++ D T P +E+++L++ N
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 112 PYIVKCHQIFTKPSGEVSI-------LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
P IVK + + + L ++MDA +L + +I + Q+L+
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALT-------GIPLPLIKSYLFQLLQ 117
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHG-------- 211
GL + HS ++HRD+KP N+LIN + G L + G AR R +
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
Query: 212 ---------GYNGFAADIWSFG------VTMMELYMG-------YYPFLEPGQEPDFLSL 249
Y A DIWS G VT L+ G + F G + +
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 232
Query: 250 MLAICFREPPSLPECSSEKFRDFIRCCLQKG----------DPSKRWTASQLLSHPFLAD 299
+ PS P+ + + F + + G DP+KR +A L+HPF D
Sbjct: 233 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
Query: 300 A 300
Sbjct: 293 V 293
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 126/302 (41%), Gaps = 68/302 (22%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP----QELNILRQTN 110
+ +K++ +G+G G V+K R+K T + ALK ++ D T P +E+++L++ N
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 111 SPYIVKCHQIFTKPSGEVSI-------LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVL 163
P IVK + + + L ++MDA +L + +I + Q+L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALT-------GIPLPLIKSYLFQLL 113
Query: 164 KGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHG------- 211
+GL + HS ++HRD+KP N+LIN + G L + G AR R +
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVVTLW 168
Query: 212 ----------GYNGFAADIWSFG------VTMMELYMG-------YYPFLEPGQEPDFLS 248
Y A DIWS G VT L+ G + F G + +
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 249 LMLAICFREPPSLPECSSEKFRDFIRCCLQKG----------DPSKRWTASQLLSHPFLA 298
+ PS P+ + + F + + G DP+KR +A L+HPF
Sbjct: 229 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
Query: 299 DA 300
D
Sbjct: 289 DV 290
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 127/304 (41%), Gaps = 68/304 (22%)
Query: 53 IDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP----QELNILRQ 108
+ + +K++ +G+G G V+K R+K T + ALK ++ D T P +E+++L++
Sbjct: 3 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 109 TNSPYIVKCHQIFTKPSGEVSI-------LMEYMDAGSLEIYVKSRGRLSEDIICTISRQ 161
N P IVK + + + L ++MDA +L + +I + Q
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALT-------GIPLPLIKSYLFQ 115
Query: 162 VLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHG----- 211
+L+GL + HS ++HRD+KP N+LIN + G L + G AR R +
Sbjct: 116 LLQGLAFCHSHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVVT 170
Query: 212 ------------GYNGFAADIWSFG------VTMMELYMG-------YYPFLEPGQEPDF 246
Y A DIWS G VT L+ G + F G +
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV 230
Query: 247 LSLMLAICFREPPSLPECSSEKFRDFIRCCLQKG----------DPSKRWTASQLLSHPF 296
+ + PS P+ + + F + + G DP+KR +A L+HPF
Sbjct: 231 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 290
Query: 297 LADA 300
D
Sbjct: 291 FQDV 294
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 126/301 (41%), Gaps = 68/301 (22%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP----QELNILRQTNS 111
+ +K++ +G+G G V+K R+K T + ALK ++ D T P +E+++L++ N
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 112 PYIVKCHQIFTKPSGEVSI-------LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
P IVK + + + L ++MDA +L + +I + Q+L+
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALT-------GIPLPLIKSYLFQLLQ 114
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHG-------- 211
GL + HS ++HRD+KP N+LIN + G L + G AR R +
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYTHEVVTLWY 169
Query: 212 ---------GYNGFAADIWSFG------VTMMELYMG-------YYPFLEPGQEPDFLSL 249
Y A DIWS G VT L+ G + F G + +
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 250 MLAICFREPPSLPECSSEKFRDFIRCCLQKG----------DPSKRWTASQLLSHPFLAD 299
+ PS P+ + + F + + G DP+KR +A L+HPF D
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Query: 300 A 300
Sbjct: 290 V 290
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 126/301 (41%), Gaps = 68/301 (22%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP----QELNILRQTNS 111
+ +K++ +G+G G V+K R+K T + ALK ++ D T P +E+++L++ N
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 112 PYIVKCHQIFTKPSGEVSI-------LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
P IVK + + + L ++MDA +L + +I + Q+L+
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALT-------GIPLPLIKSYLFQLLQ 113
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHG-------- 211
GL + HS ++HRD+KP N+LIN + G L + G AR R +
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVVTLWY 168
Query: 212 ---------GYNGFAADIWSFG------VTMMELYMG-------YYPFLEPGQEPDFLSL 249
Y A DIWS G VT L+ G + F G + +
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 228
Query: 250 MLAICFREPPSLPECSSEKFRDFIRCCLQKG----------DPSKRWTASQLLSHPFLAD 299
+ PS P+ + + F + + G DP+KR +A L+HPF D
Sbjct: 229 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
Query: 300 A 300
Sbjct: 289 V 289
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 126/301 (41%), Gaps = 68/301 (22%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP----QELNILRQTNS 111
+ +K++ +G+G G V+K R+K T + ALK ++ D T P +E+++L++ N
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 112 PYIVKCHQIFTKPSGEVSI-------LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
P IVK + + + L ++MDA +L + +I + Q+L+
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALT-------GIPLPLIKSYLFQLLQ 113
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHG-------- 211
GL + HS ++HRD+KP N+LIN + G L + G AR R +
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYTHEVVTLWY 168
Query: 212 ---------GYNGFAADIWSFG------VTMMELYMG-------YYPFLEPGQEPDFLSL 249
Y A DIWS G VT L+ G + F G + +
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 228
Query: 250 MLAICFREPPSLPECSSEKFRDFIRCCLQKG----------DPSKRWTASQLLSHPFLAD 299
+ PS P+ + + F + + G DP+KR +A L+HPF D
Sbjct: 229 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
Query: 300 A 300
Sbjct: 289 V 289
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 126/301 (41%), Gaps = 68/301 (22%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP----QELNILRQTNS 111
+ +K++ +G+G G V+K R+K T + ALK ++ D T P +E+++L++ N
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 112 PYIVKCHQIFTKPSGEVSI-------LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
P IVK + + + L ++MDA +L + +I + Q+L+
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALT-------GIPLPLIKSYLFQLLQ 114
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHG-------- 211
GL + HS ++HRD+KP N+LIN + G L + G AR R +
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYTHEVVTLWY 169
Query: 212 ---------GYNGFAADIWSFG------VTMMELYMG-------YYPFLEPGQEPDFLSL 249
Y A DIWS G VT L+ G + F G + +
Sbjct: 170 RAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 250 MLAICFREPPSLPECSSEKFRDFIRCCLQKG----------DPSKRWTASQLLSHPFLAD 299
+ PS P+ + + F + + G DP+KR +A L+HPF D
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Query: 300 A 300
Sbjct: 290 V 290
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 126/301 (41%), Gaps = 68/301 (22%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP----QELNILRQTNS 111
+ +K++ +G+G G V+K R+K T + ALK ++ D T P +E+++L++ N
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 112 PYIVKCHQIFTKPSGEVSI-------LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
P IVK + + + L ++MDA +L + +I + Q+L+
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALT-------GIPLPLIKSYLFQLLQ 115
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHG-------- 211
GL + HS ++HRD+KP N+LIN + G L + G AR R +
Sbjct: 116 GLAFCHSHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYTHEVVTLWY 170
Query: 212 ---------GYNGFAADIWSFG------VTMMELYMG-------YYPFLEPGQEPDFLSL 249
Y A DIWS G VT L+ G + F G + +
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 230
Query: 250 MLAICFREPPSLPECSSEKFRDFIRCCLQKG----------DPSKRWTASQLLSHPFLAD 299
+ PS P+ + + F + + G DP+KR +A L+HPF D
Sbjct: 231 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
Query: 300 A 300
Sbjct: 291 V 291
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 126/301 (41%), Gaps = 68/301 (22%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP----QELNILRQTNS 111
+ +K++ +G+G G V+K R+K T + ALK ++ D T P +E+++L++ N
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 112 PYIVKCHQIFTKPSGEVSI-------LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
P IVK + + + L ++MDA +L + +I + Q+L+
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALT-------GIPLPLIKSYLFQLLQ 116
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHG-------- 211
GL + HS ++HRD+KP N+LIN + G L + G AR R +
Sbjct: 117 GLAFCHSHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVVTLWY 171
Query: 212 ---------GYNGFAADIWSFG------VTMMELYMG-------YYPFLEPGQEPDFLSL 249
Y A DIWS G VT L+ G + F G + +
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 231
Query: 250 MLAICFREPPSLPECSSEKFRDFIRCCLQKG----------DPSKRWTASQLLSHPFLAD 299
+ PS P+ + + F + + G DP+KR +A L+HPF D
Sbjct: 232 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
Query: 300 A 300
Sbjct: 292 V 292
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 126/302 (41%), Gaps = 68/302 (22%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP----QELNILRQTN 110
+ +K++ +G+G G V+K R+K T + ALK ++ D T P +E+++L++ N
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 111 SPYIVKCHQIFTKPSGEVSI-------LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVL 163
P IVK + + + L ++MDA +L + +I + Q+L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALT-------GIPLPLIKSYLFQLL 113
Query: 164 KGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHG------- 211
+GL + HS ++HRD+KP N+LIN + G L + G AR R +
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVVTLW 168
Query: 212 ----------GYNGFAADIWSFG------VTMMELYMG-------YYPFLEPGQEPDFLS 248
Y A DIWS G VT L+ G + F G + +
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 249 LMLAICFREPPSLPECSSEKFRDFIRCCLQKG----------DPSKRWTASQLLSHPFLA 298
+ PS P+ + + F + + G DP+KR +A L+HPF
Sbjct: 229 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
Query: 299 DA 300
D
Sbjct: 289 DV 290
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 126/302 (41%), Gaps = 68/302 (22%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP----QELNILRQTN 110
+ +K++ +G+G G V+K R+K T + ALK ++ D T P +E+++L++ N
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 111 SPYIVKCHQIFTKPSGEVSI-------LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVL 163
P IVK + + + L ++MDA +L + +I + Q+L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALT-------GIPLPLIKSYLFQLL 113
Query: 164 KGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHG------- 211
+GL + HS ++HRD+KP N+LIN + G L + G AR R +
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVVTLW 168
Query: 212 ----------GYNGFAADIWSFG------VTMMELYMG-------YYPFLEPGQEPDFLS 248
Y A DIWS G VT L+ G + F G + +
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 249 LMLAICFREPPSLPECSSEKFRDFIRCCLQKG----------DPSKRWTASQLLSHPFLA 298
+ PS P+ + + F + + G DP+KR +A L+HPF
Sbjct: 229 PGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
Query: 299 DA 300
D
Sbjct: 289 DV 290
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 126/301 (41%), Gaps = 68/301 (22%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP----QELNILRQTNS 111
+ +K++ +G+G G V+K R+K T + ALK ++ D T P +E+++L++ N
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 112 PYIVKCHQIFTKPSGEVSI-------LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
P IVK + + + L ++MDA +L + +I + Q+L+
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALT-------GIPLPLIKSYLFQLLQ 121
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHG-------- 211
GL + HS ++HRD+KP N+LIN + G L + G AR R +
Sbjct: 122 GLAFCHSHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYTHEVVTLWY 176
Query: 212 ---------GYNGFAADIWSFG------VTMMELYMG-------YYPFLEPGQEPDFLSL 249
Y A DIWS G VT L+ G + F G + +
Sbjct: 177 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 236
Query: 250 MLAICFREPPSLPECSSEKFRDFIRCCLQKG----------DPSKRWTASQLLSHPFLAD 299
+ PS P+ + + F + + G DP+KR +A L+HPF D
Sbjct: 237 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 296
Query: 300 A 300
Sbjct: 297 V 297
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 126/301 (41%), Gaps = 68/301 (22%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP----QELNILRQTNS 111
+ +K++ +G+G G V+K R+K T + ALK ++ D T P +E+++L++ N
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 112 PYIVKCHQIFTKPSGEVSI-------LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
P IVK + + + L ++MDA +L + +I + Q+L+
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALT-------GIPLPLIKSYLFQLLQ 114
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHG-------- 211
GL + HS ++HRD+KP N+LIN + G L + G AR R +
Sbjct: 115 GLSFCHSHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYTHEVVTLWY 169
Query: 212 ---------GYNGFAADIWSFG------VTMMELYMG-------YYPFLEPGQEPDFLSL 249
Y A DIWS G VT L+ G + F G + +
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 250 MLAICFREPPSLPECSSEKFRDFIRCCLQKG----------DPSKRWTASQLLSHPFLAD 299
+ PS P+ + + F + + G DP+KR +A L+HPF D
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Query: 300 A 300
Sbjct: 290 V 290
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 126/301 (41%), Gaps = 68/301 (22%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP----QELNILRQTNS 111
+ +K++ +G+G G V+K R+K T + ALK ++ D T P +E+++L++ N
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 112 PYIVKCHQIFTKPSGEVSI-------LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
P IVK + + + L ++MDA +L + +I + Q+L+
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALT-------GIPLPLIKSYLFQLLQ 115
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHG-------- 211
GL + HS ++HRD+KP N+LIN + G L + G AR R +
Sbjct: 116 GLAFCHSHRVLHRDLKPENLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVVTLWY 170
Query: 212 ---------GYNGFAADIWSFG------VTMMELYMG-------YYPFLEPGQEPDFLSL 249
Y A DIWS G VT L+ G + F G + +
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 230
Query: 250 MLAICFREPPSLPECSSEKFRDFIRCCLQKG----------DPSKRWTASQLLSHPFLAD 299
+ PS P+ + + F + + G DP+KR +A L+HPF D
Sbjct: 231 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
Query: 300 A 300
Sbjct: 291 V 291
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 126/301 (41%), Gaps = 68/301 (22%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP----QELNILRQTNS 111
+ +K++ +G+G G V+K R+K T + ALK ++ D T P +E+++L++ N
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 112 PYIVKCHQIFTKPSGEVSI-------LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
P IVK + + + L ++MDA +L + +I + Q+L+
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALT-------GIPLPLIKSYLFQLLQ 115
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHG-------- 211
GL + HS ++HRD+KP N+LIN + G L + G AR R +
Sbjct: 116 GLAFCHSHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVVTLWY 170
Query: 212 ---------GYNGFAADIWSFG------VTMMELYMG-------YYPFLEPGQEPDFLSL 249
Y A DIWS G VT L+ G + F G + +
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 230
Query: 250 MLAICFREPPSLPECSSEKFRDFIRCCLQKG----------DPSKRWTASQLLSHPFLAD 299
+ PS P+ + + F + + G DP+KR +A L+HPF D
Sbjct: 231 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
Query: 300 A 300
Sbjct: 291 V 291
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 112/264 (42%), Gaps = 36/264 (13%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQC-----DRGTPPNPQELNILRQTNSPYIVKC 117
++LG+G+ TV R T YA+K+++ + P +E +++ + + P+ VK
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ F + ++ + Y G L Y++ G E + +++ L Y+H + I+HR
Sbjct: 95 YFTF-QDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 153
Query: 178 DIKPANVLINEKM-----EHPCGYSCLYESGEARHRKHGGYNGF-------------AAD 219
D+KP N+L+NE M + ES +AR G + ++D
Sbjct: 154 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 213
Query: 220 IWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQK 279
+W+ G + +L G PF G E L+ + PE K RD + L
Sbjct: 214 LWALGCIIYQLVAGLPPF-RAGNE----YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVL 268
Query: 280 GDPSKRWTASQ------LLSHPFL 297
D +KR + L +HPF
Sbjct: 269 -DATKRLGCEEMEGYGPLKAHPFF 291
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 126/301 (41%), Gaps = 68/301 (22%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP----QELNILRQTNS 111
+ +K++ +G+G G V+K R+K T + ALK ++ D T P +E+++L++ N
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 112 PYIVKCHQIFTKPSGEVSI-------LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
P IVK + + + L ++MDA +L + +I + Q+L+
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALT-------GIPLPLIKSYLFQLLQ 115
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHG-------- 211
GL + HS ++HRD+KP N+LIN + G L + G AR R +
Sbjct: 116 GLAFCHSHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVVTLWY 170
Query: 212 ---------GYNGFAADIWSFG------VTMMELYMG-------YYPFLEPGQEPDFLSL 249
Y A DIWS G VT L+ G + F G + +
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 230
Query: 250 MLAICFREPPSLPECSSEKFRDFIRCCLQKG----------DPSKRWTASQLLSHPFLAD 299
+ PS P+ + + F + + G DP+KR +A L+HPF D
Sbjct: 231 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
Query: 300 A 300
Sbjct: 291 V 291
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 126/301 (41%), Gaps = 68/301 (22%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP----QELNILRQTNS 111
+ +K++ +G+G G V+K R+K T + ALK ++ D T P +E+++L++ N
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 112 PYIVKCHQIFTKPSGEVSI-------LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
P IVK + + + L ++MDA +L + +I + Q+L+
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALT-------GIPLPLIKSYLFQLLQ 113
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHG-------- 211
GL + HS ++HRD+KP N+LIN + G L + G AR R +
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVVTLWY 168
Query: 212 ---------GYNGFAADIWSFG------VTMMELYMG-------YYPFLEPGQEPDFLSL 249
Y A DIWS G VT L+ G + F G + +
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 228
Query: 250 MLAICFREPPSLPECSSEKFRDFIRCCLQKG----------DPSKRWTASQLLSHPFLAD 299
+ PS P+ + + F + + G DP+KR +A L+HPF D
Sbjct: 229 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
Query: 300 A 300
Sbjct: 289 V 289
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 112/264 (42%), Gaps = 36/264 (13%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQC-----DRGTPPNPQELNILRQTNSPYIVKC 117
++LG+G+ TV R T YA+K+++ + P +E +++ + + P+ VK
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ F + ++ + Y G L Y++ G E + +++ L Y+H + I+HR
Sbjct: 98 YFTF-QDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 178 DIKPANVLINEKM-----EHPCGYSCLYESGEARHRKHGGYNGF-------------AAD 219
D+KP N+L+NE M + ES +AR G + ++D
Sbjct: 157 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSD 216
Query: 220 IWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQK 279
+W+ G + +L G PF G E L+ + PE K RD + L
Sbjct: 217 LWALGCIIYQLVAGLPPF-RAGNE----YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVL 271
Query: 280 GDPSKRWTASQ------LLSHPFL 297
D +KR + L +HPF
Sbjct: 272 -DATKRLGCEEMEGYGPLKAHPFF 294
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 111/261 (42%), Gaps = 33/261 (12%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQC----DRGTPPNPQELNILRQTNSPYIVKC 117
L+ LG G G V + K T ++ K + D+ T N E++I+ Q + P ++
Sbjct: 56 LEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKN--EISIMNQLHHPKLINL 113
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRG-RLSEDIICTISRQVLKGLFYMHSRNIVH 176
H F + E+ +++E++ G L + + ++SE + RQ +GL +MH +IVH
Sbjct: 114 HDAF-EDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVH 172
Query: 177 RDIKPANVLINEKMEHPC-----GYSCLYESGEARHRKHGGYN------------GFAAD 219
DIKP N++ K G + E GF D
Sbjct: 173 LDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTD 232
Query: 220 IWSFGVTMMELYMGYYPFLEPGQEPDFLSLM-LAICFRE--PPSLPECSSEKFRDFIRCC 276
+W+ GV L G PF E D +L + C E + S E +DFI+
Sbjct: 233 MWAIGVLGYVLLSGLSPF---AGEDDLETLQNVKRCDWEFDEDAFSSVSPEA-KDFIKNL 288
Query: 277 LQKGDPSKRWTASQLLSHPFL 297
LQK +P KR T L HP+L
Sbjct: 289 LQK-EPRKRLTVHDALEHPWL 308
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 112/260 (43%), Gaps = 33/260 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQIFTKP 124
+G G+ + HK T +A+K++ + P E+ +LR P I+ ++
Sbjct: 30 IGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEI-LLRYGQHPNIITLKDVY-DD 87
Query: 125 SGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANV 184
V ++ E M G L + + SE + + K + Y+H++ +VHRD+KP+N+
Sbjct: 88 GKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNI 147
Query: 185 LI------------------------NEKMEHPCGYSCLYESGEARHRKHGGYNGFAADI 220
L N + PC Y+ + + E R+ GY+ A DI
Sbjct: 148 LYVDESGNPESIRICDFGFAKQLRAENGLLMTPC-YTANFVAPEVLERQ--GYDA-ACDI 203
Query: 221 WSFGVTMMELYMGYYPFLE-PGQEP-DFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQ 278
WS GV + + GY PF P P + L+ + + F S+ +D + L
Sbjct: 204 WSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLH 263
Query: 279 KGDPSKRWTASQLLSHPFLA 298
DP +R TA+ +L HP++
Sbjct: 264 V-DPHQRLTAALVLRHPWIV 282
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 111/257 (43%), Gaps = 29/257 (11%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ----ELNILRQTNSPYIVKC 117
L+ +G+GN V RH T A++++ + + Q E+ I++ N P IVK
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
++ + + ++MEY G + Y+ + GR+ E RQ++ + Y H + IVHR
Sbjct: 79 FEVI-ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHR 137
Query: 178 DIKPANVLINEKME---HPCGYSCLYESGEARHRKHGG-------------YNGFAADIW 221
D+K N+L++ M G+S + G G Y+G D+W
Sbjct: 138 DLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVW 197
Query: 222 SFGVTMMELYMGYYPFLEPGQE-PDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKG 280
S GV + L G PF GQ + +L +R P + + F+
Sbjct: 198 SLGVILYTLVSGSLPF--DGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLIL----- 250
Query: 281 DPSKRWTASQLLSHPFL 297
+PSKR T Q++ ++
Sbjct: 251 NPSKRGTLEQIMKDRWM 267
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 116/270 (42%), Gaps = 34/270 (12%)
Query: 60 EKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDR-------GTPPNPQELNILRQTNSP 112
E +V+G+G V + +++T +A+K++ + T +E +I P
Sbjct: 27 ELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHP 86
Query: 113 YIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR----LSEDIICTISRQVLKGLFY 168
+IV+ + ++ G + ++ E+MD L + R SE + RQ+L+ L Y
Sbjct: 87 HIVELLETYSS-DGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 169 MHSRNIVHRDIKPANVLINEKMEHP----CGYSCLYESGEARHRKHG--GYNGFAA---- 218
H NI+HRD+KP NVL+ K + + GE+ G G F A
Sbjct: 146 CHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVV 205
Query: 219 ---------DIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
D+W GV + L G PF G + ++ ++ P SE
Sbjct: 206 KREPYGKPVDVWGCGVILFILLSGCLPFY--GTKERLFEGIIKGKYKMNPRQWSHISESA 263
Query: 270 RDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299
+D +R L DP++R T + L+HP+L +
Sbjct: 264 KDLVRRMLML-DPAERITVYEALNHPWLKE 292
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 118/275 (42%), Gaps = 44/275 (16%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELNILRQTN 110
+++ E L++LG+G G V V+ K T YA+K+++ + + E +L+ +
Sbjct: 8 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 67
Query: 111 SPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMH 170
P++ F + + +MEY + G L ++ SED +++ L Y+H
Sbjct: 68 HPFLTALKYSF-QTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 126
Query: 171 S-RNIVHRDIKPANVLINEK--------------------MEHPCGYSCLYESGEARHRK 209
S +N+V+RD+K N+++++ M+ CG + Y + E
Sbjct: 127 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCG-TPEYLAPEVLEDN 185
Query: 210 HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL-PECSSEK 268
G A D W GV M E+ G PF E F L+L R P +L PE S
Sbjct: 186 DYGR---AVDWWGLGVVMYEMMCGRLPFYNQDHEKLF-ELILMEEIRFPRTLGPEAKS-- 239
Query: 269 FRDFIRCCLQKGDPSKRW-----TASQLLSHPFLA 298
+ L K DP +R A +++ H F A
Sbjct: 240 ----LLSGLLKKDPKQRLGGGSEDAKEIMQHRFFA 270
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 118/275 (42%), Gaps = 44/275 (16%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELNILRQTN 110
+++ E L++LG+G G V V+ K T YA+K+++ + + E +L+ +
Sbjct: 7 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 66
Query: 111 SPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMH 170
P++ F + + +MEY + G L ++ SED +++ L Y+H
Sbjct: 67 HPFLTALKYSF-QTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 125
Query: 171 S-RNIVHRDIKPANVLINEK--------------------MEHPCGYSCLYESGEARHRK 209
S +N+V+RD+K N+++++ M+ CG + Y + E
Sbjct: 126 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCG-TPEYLAPEVLEDN 184
Query: 210 HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL-PECSSEK 268
G A D W GV M E+ G PF E F L+L R P +L PE S
Sbjct: 185 DYGR---AVDWWGLGVVMYEMMCGRLPFYNQDHEKLF-ELILMEEIRFPRTLGPEAKS-- 238
Query: 269 FRDFIRCCLQKGDPSKRW-----TASQLLSHPFLA 298
+ L K DP +R A +++ H F A
Sbjct: 239 ----LLSGLLKKDPKQRLGGGSEDAKEIMQHRFFA 269
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 112/264 (42%), Gaps = 36/264 (13%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQC-----DRGTPPNPQELNILRQTNSPYIVKC 117
++LG+G+ TV R T YA+K+++ + P +E +++ + + P+ VK
Sbjct: 43 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 102
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ F + ++ + Y G L Y++ G E + +++ L Y+H + I+HR
Sbjct: 103 YFCF-QDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 161
Query: 178 DIKPANVLINEKM-----EHPCGYSCLYESGEARHRKHGGYNGF-------------AAD 219
D+KP N+L+NE M + ES +AR G + ++D
Sbjct: 162 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 221
Query: 220 IWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQK 279
+W+ G + +L G PF G E L+ + PE K RD + L
Sbjct: 222 LWALGCIIYQLVAGLPPF-RAGNE----YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVL 276
Query: 280 GDPSKRWTASQ------LLSHPFL 297
D +KR + L +HPF
Sbjct: 277 -DATKRLGCEEMEGYGPLKAHPFF 299
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 125/301 (41%), Gaps = 68/301 (22%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP----QELNILRQTNS 111
+ +K++ +G+G G V+K R+K T + ALK ++ D T P +E+++L++ N
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 112 PYIVKCHQIFTKPSGEVSI-------LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
P IVK + + + L +MDA +L + +I + Q+L+
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALT-------GIPLPLIKSYLFQLLQ 113
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHG-------- 211
GL + HS ++HRD+KP N+LIN + G L + G AR R +
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYTHEVVTLWY 168
Query: 212 ---------GYNGFAADIWSFG------VTMMELYMG-------YYPFLEPGQEPDFLSL 249
Y A DIWS G VT L+ G + F G + +
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 228
Query: 250 MLAICFREPPSLPECSSEKFRDFIRCCLQKG----------DPSKRWTASQLLSHPFLAD 299
+ PS P+ + + F + + G DP+KR +A L+HPF D
Sbjct: 229 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
Query: 300 A 300
Sbjct: 289 V 289
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 118/275 (42%), Gaps = 44/275 (16%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELNILRQTN 110
+++ E L++LG+G G V V+ K T YA+K+++ + + E +L+ +
Sbjct: 9 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 68
Query: 111 SPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMH 170
P++ F + + +MEY + G L ++ SED +++ L Y+H
Sbjct: 69 HPFLTALKYSF-QTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 127
Query: 171 S-RNIVHRDIKPANVLINEK--------------------MEHPCGYSCLYESGEARHRK 209
S +N+V+RD+K N+++++ M+ CG + Y + E
Sbjct: 128 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCG-TPEYLAPEVLEDN 186
Query: 210 HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL-PECSSEK 268
G A D W GV M E+ G PF E F L+L R P +L PE S
Sbjct: 187 DYGR---AVDWWGLGVVMYEMMCGRLPFYNQDHEKLF-ELILMEEIRFPRTLGPEAKS-- 240
Query: 269 FRDFIRCCLQKGDPSKRW-----TASQLLSHPFLA 298
+ L K DP +R A +++ H F A
Sbjct: 241 ----LLSGLLKKDPKQRLGGGSEDAKEIMQHRFFA 271
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 125/299 (41%), Gaps = 68/299 (22%)
Query: 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP----QELNILRQTNSPY 113
+K++ +G+G G V+K R+K T + ALK ++ D T P +E+++L++ N P
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 114 IVKCHQIFTKPSGEVSI-------LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGL 166
IVK + + + L ++MDA +L + +I + Q+L+GL
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALT-------GIPLPLIKSYLFQLLQGL 115
Query: 167 FYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHG---------- 211
+ HS ++HRD+KP N+LIN + G L + G AR R +
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 170
Query: 212 -------GYNGFAADIWSFG------VTMMELYMG-------YYPFLEPGQEPDFLSLML 251
Y A DIWS G VT L+ G + F G + + +
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 230
Query: 252 AICFREPPSLPECSSEKFRDFIRCCLQKG----------DPSKRWTASQLLSHPFLADA 300
PS P+ + + F + + G DP+KR +A L+HPF D
Sbjct: 231 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 289
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 110/252 (43%), Gaps = 26/252 (10%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELNILRQTNSPYIVKCHQ 119
LG+G G V+ R +Q+ + ALKV+ Q ++ + +E+ I P I++ +
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 120 IFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDI 179
F + V +++EY G++ ++ R E T ++ L Y HS+ ++HRDI
Sbjct: 80 YFHDAT-RVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDI 138
Query: 180 KPANVLINEKMEHPC---GYSCLYESGEAR-----------HRKHGGYNGFAADIWSFGV 225
KP N+L+ E G+S S G + D+WS GV
Sbjct: 139 KPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 198
Query: 226 TMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKR 285
E +G PF + + + R + P+ +E RD I L K + S+R
Sbjct: 199 LCYEFLVGMPPFEAHTYQETYRRIS-----RVEFTFPDFVTEGARDLISRLL-KHNASQR 252
Query: 286 WTASQLLSHPFL 297
T +++L HP++
Sbjct: 253 LTLAEVLEHPWI 264
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 126/300 (42%), Gaps = 68/300 (22%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP----QELNILRQTNS 111
+ +K++ +G+G G V+K R+K T + ALK ++ D T P +E+++L++ N
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 112 PYIVKCHQIFTKPSGEVSI-------LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
P IVK + + + L ++MDA +L + +I + Q+L+
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALT-------GIPLPLIKSYLFQLLQ 114
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHG-------- 211
GL + HS ++HRD+KP N+LIN + G L + G AR R +
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVVTLWY 169
Query: 212 ---------GYNGFAADIWSFG------VTMMELYMG-------YYPFLEPGQEPDFLSL 249
Y A DIWS G VT L+ G + F G + +
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 250 MLAICFREPPSLPECSSEKFRDFIRCCLQKG----------DPSKRWTASQLLSHPFLAD 299
+ PS P+ + + F + + G DP+KR +A L+HPF D
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 21/195 (10%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ----ELNILRQTNSPYIVKCH 118
+ +G+GN V RH T A+K++ + P + Q E+ I++ N P IVK
Sbjct: 21 KTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 80
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRD 178
++ + + ++MEY G + Y+ + GR+ E RQ++ + Y H + IVHRD
Sbjct: 81 EVI-ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRD 139
Query: 179 IKPANVLINEKME---HPCGYSCLYESGEARHRKHGG-------------YNGFAADIWS 222
+K N+L++ M G+S + G G Y+G D+WS
Sbjct: 140 LKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWS 199
Query: 223 FGVTMMELYMGYYPF 237
GV + L G PF
Sbjct: 200 LGVILYTLVSGSLPF 214
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 110/252 (43%), Gaps = 26/252 (10%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELNILRQTNSPYIVKCHQ 119
LG+G G V+ R +Q+ + ALKV+ Q ++ + +E+ I P I++ +
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 120 IFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDI 179
F + V +++EY G++ ++ R E T ++ L Y HS+ ++HRDI
Sbjct: 80 YFHDAT-RVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDI 138
Query: 180 KPANVLINEKMEHPC---GYSCLYESGEAR-----------HRKHGGYNGFAADIWSFGV 225
KP N+L+ E G+S S G + D+WS GV
Sbjct: 139 KPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 198
Query: 226 TMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKR 285
E +G PF + + + R + P+ +E RD I L K + S+R
Sbjct: 199 LCYEFLVGMPPFEAHTYQETYRRIS-----RVEFTFPDFVTEGARDLISRLL-KHNASQR 252
Query: 286 WTASQLLSHPFL 297
T +++L HP++
Sbjct: 253 LTLAEVLEHPWI 264
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 125/301 (41%), Gaps = 68/301 (22%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP----QELNILRQTNS 111
+ +K++ +G+G G V+K R+K T + ALK ++ D T P +E+++L++ N
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 112 PYIVKCHQIFTKPSGEVSI-------LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
P IVK + + + L +MDA +L + +I + Q+L+
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALT-------GIPLPLIKSYLFQLLQ 117
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHG-------- 211
GL + HS ++HRD+KP N+LIN + G L + G AR R +
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYXHEVVTLWY 172
Query: 212 ---------GYNGFAADIWSFG------VTMMELYMG-------YYPFLEPGQEPDFLSL 249
Y A DIWS G VT L+ G + F G + +
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 232
Query: 250 MLAICFREPPSLPECSSEKFRDFIRCCLQKG----------DPSKRWTASQLLSHPFLAD 299
+ PS P+ + + F + + G DP+KR +A L+HPF D
Sbjct: 233 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
Query: 300 A 300
Sbjct: 293 V 293
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 111/264 (42%), Gaps = 36/264 (13%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQC-----DRGTPPNPQELNILRQTNSPYIVKC 117
++LG+G+ TV R T YA+K+++ + P +E +++ + + P+ VK
Sbjct: 41 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 100
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ F + ++ + Y G L Y++ G E + +++ L Y+H + I+HR
Sbjct: 101 YFTF-QDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 159
Query: 178 DIKPANVLINEKM-----EHPCGYSCLYESGEARHRKHGGYNGF-------------AAD 219
D+KP N+L+NE M + ES +AR G + ++D
Sbjct: 160 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 219
Query: 220 IWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQK 279
+W+ G + +L G PF G E L+ + P K RD + L
Sbjct: 220 LWALGCIIYQLVAGLPPF-RAGNE----YLIFQKIIKLEYDFPAAFFPKARDLVEKLLVL 274
Query: 280 GDPSKRWTASQ------LLSHPFL 297
D +KR + L +HPF
Sbjct: 275 -DATKRLGCEEMEGYGPLKAHPFF 297
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 117/276 (42%), Gaps = 46/276 (16%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELNILRQTN 110
+++ E L++LG+G G V V+ K T YA+K+++ + + E +L+ +
Sbjct: 150 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 209
Query: 111 SPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMH 170
P++ F + + +MEY + G L ++ SED +++ L Y+H
Sbjct: 210 HPFLTALKYSF-QTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 268
Query: 171 S-RNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYN--------------- 214
S +N+V+RD+K N+++++ G+ + + G + G
Sbjct: 269 SEKNVVYRDLKLENLMLDKD-----GHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEV 323
Query: 215 ------GFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL-PECSSE 267
G A D W GV M E+ G PF E F L+L R P +L PE S
Sbjct: 324 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF-ELILMEEIRFPRTLGPEAKS- 381
Query: 268 KFRDFIRCCLQKGDPSKRW-----TASQLLSHPFLA 298
+ L K DP +R A +++ H F A
Sbjct: 382 -----LLSGLLKKDPKQRLGGGSEDAKEIMQHRFFA 412
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 125/278 (44%), Gaps = 55/278 (19%)
Query: 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQ-TNSPYIVK 116
QL K QVLG G G V + H++T ALK++ +P QE++ Q + P+IV
Sbjct: 31 QLSK-QVLGLGVNGKVLECFHRRTGQKCALKLL---YDSPKARQEVDHHWQASGGPHIVC 86
Query: 117 CHQIFTK-PSGE--VSILMEYMDAGSLEIYVKSRGR--LSEDIICTISRQVLKGLFYMHS 171
++ G+ + I+ME M+ G L ++ RG +E I R + + ++HS
Sbjct: 87 ILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS 146
Query: 172 RNIVHRDIKPANVLINEK---------------------MEHPCGYSCLYES----GEAR 206
NI HRD+KP N+L K ++ PC Y+ Y + G +
Sbjct: 147 HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPC-YTPYYVAPEVLGPEK 205
Query: 207 HRKHGGYNGFAADIWSFGVTMMELYMGYYPF-------LEPGQEPDFLSLMLAICFREPP 259
+ K + D+WS GV M L G+ PF + PG + + L P
Sbjct: 206 YDK-------SCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMK---RRIRLGQYGFPNP 255
Query: 260 SLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297
E SE + IR L K DP++R T +Q ++HP++
Sbjct: 256 EWSEV-SEDAKQLIRLLL-KTDPTERLTITQFMNHPWI 291
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 125/278 (44%), Gaps = 55/278 (19%)
Query: 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQ-TNSPYIVK 116
QL K QVLG G G V + H++T ALK++ +P QE++ Q + P+IV
Sbjct: 12 QLSK-QVLGLGVNGKVLECFHRRTGQKCALKLL---YDSPKARQEVDHHWQASGGPHIVC 67
Query: 117 CHQIFTK-PSGE--VSILMEYMDAGSLEIYVKSRGR--LSEDIICTISRQVLKGLFYMHS 171
++ G+ + I+ME M+ G L ++ RG +E I R + + ++HS
Sbjct: 68 ILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS 127
Query: 172 RNIVHRDIKPANVLINEK---------------------MEHPCGYSCLYES----GEAR 206
NI HRD+KP N+L K ++ PC Y+ Y + G +
Sbjct: 128 HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPC-YTPYYVAPEVLGPEK 186
Query: 207 HRKHGGYNGFAADIWSFGVTMMELYMGYYPF-------LEPGQEPDFLSLMLAICFREPP 259
+ K + D+WS GV M L G+ PF + PG + + L P
Sbjct: 187 YDK-------SCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMK---RRIRLGQYGFPNP 236
Query: 260 SLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297
E SE + IR L K DP++R T +Q ++HP++
Sbjct: 237 EWSEV-SEDAKQLIRLLL-KTDPTERLTITQFMNHPWI 272
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 117/276 (42%), Gaps = 46/276 (16%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELNILRQTN 110
+++ E L++LG+G G V V+ K T YA+K+++ + + E +L+ +
Sbjct: 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 206
Query: 111 SPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMH 170
P++ F + + +MEY + G L ++ SED +++ L Y+H
Sbjct: 207 HPFLTALKYSF-QTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 265
Query: 171 S-RNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYN--------------- 214
S +N+V+RD+K N+++++ G+ + + G + G
Sbjct: 266 SEKNVVYRDLKLENLMLDKD-----GHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEV 320
Query: 215 ------GFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL-PECSSE 267
G A D W GV M E+ G PF E F L+L R P +L PE S
Sbjct: 321 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF-ELILMEEIRFPRTLGPEAKS- 378
Query: 268 KFRDFIRCCLQKGDPSKRW-----TASQLLSHPFLA 298
+ L K DP +R A +++ H F A
Sbjct: 379 -----LLSGLLKKDPKQRLGGGSEDAKEIMQHRFFA 409
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 113/268 (42%), Gaps = 26/268 (9%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELN 104
G+ L E + LG+G G V+ R KQ+ + ALKV+ Q ++ + +E+
Sbjct: 1 GKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
I P I++ + F + V +++EY G++ ++ + E T ++
Sbjct: 61 IQSHLRHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEAR-----------HRKH 210
L Y HS+ ++HRDIKP N+L+ E G+S S
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIE 179
Query: 211 GGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFR 270
G + D+WS GV E +G PF E + R + P+ +E R
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPPF-----EANTYQETYKRISRVEFTFPDFVTEGAR 234
Query: 271 DFIRCCLQKGDPSKRWTASQLLSHPFLA 298
D I L K +PS+R ++L HP++
Sbjct: 235 DLISRLL-KHNPSQRPMLREVLEHPWIT 261
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 26/263 (9%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELNILRQT 109
L E + LG+G G V+ R KQ+ + ALKV+ Q ++ + +E+ I
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
P I++ + F + V +++EY G++ ++ + E T ++ L Y
Sbjct: 71 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 129
Query: 170 HSRNIVHRDIKPANVLINEKME---HPCGYSCLYESGEAR-----------HRKHGGYNG 215
HS+ ++HRDIKP N+L+ E G+S S G +
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEGRXHD 189
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
D+WS GV E +G PF E + R + P+ +E RD I
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPF-----EANTYQETYKRISRVEFTFPDFVTEGARDLISR 244
Query: 276 CLQKGDPSKRWTASQLLSHPFLA 298
L K +PS+R ++L HP++
Sbjct: 245 LL-KHNPSQRPXLREVLEHPWIT 266
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 111/264 (42%), Gaps = 36/264 (13%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQC-----DRGTPPNPQELNILRQTNSPYIVKC 117
++LG+G+ T R T YA+K+++ + P +E +++ + + P+ VK
Sbjct: 36 KILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ F + ++ + Y G L Y++ G E + +++ L Y+H + I+HR
Sbjct: 96 YFTF-QDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 178 DIKPANVLINEKM-----EHPCGYSCLYESGEARHRKHGGYNGF-------------AAD 219
D+KP N+L+NE M + ES +AR G + ++D
Sbjct: 155 DLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSD 214
Query: 220 IWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQK 279
+W+ G + +L G PF G E L+ + PE K RD + L
Sbjct: 215 LWALGCIIYQLVAGLPPF-RAGNE----YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVL 269
Query: 280 GDPSKRWTASQ------LLSHPFL 297
D +KR + L +HPF
Sbjct: 270 -DATKRLGCEEMEGYGPLKAHPFF 292
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 112/263 (42%), Gaps = 26/263 (9%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELNILRQT 109
L E + LG+G G V+ R K + + ALKV+ Q ++ + +E+ I
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
P I++ + F S V +++EY G++ ++ + E T ++ L Y
Sbjct: 66 RHPNILRLYGYF-HDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 170 HSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEAR-----------HRKHGGYNG 215
HS+ ++HRDIKP N+L+ E G+S S G +
Sbjct: 125 HSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHD 184
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
D+WS GV E +G PF E D + + F + P+ +E RD I
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPF-EANTYQDTYKRISRVEF----TFPDFVTEGARDLISR 239
Query: 276 CLQKGDPSKRWTASQLLSHPFLA 298
L K +PS+R ++L HP++
Sbjct: 240 LL-KHNPSQRPMLREVLEHPWIT 261
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 113/268 (42%), Gaps = 26/268 (9%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELN 104
G+ L E + LG+G G V+ R KQ+ + ALKV+ Q ++ + +E+
Sbjct: 1 GKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
I P I++ + F + V +++EY G++ ++ + E T ++
Sbjct: 61 IQSHLRHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEAR-----------HRKH 210
L Y HS+ ++HRDIKP N+L+ E G+S S
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMIE 179
Query: 211 GGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFR 270
G + D+WS GV E +G PF E + R + P+ +E R
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPPF-----EANTYQETYKRISRVEFTFPDFVTEGAR 234
Query: 271 DFIRCCLQKGDPSKRWTASQLLSHPFLA 298
D I L K +PS+R ++L HP++
Sbjct: 235 DLISRLL-KHNPSQRPMLREVLEHPWIT 261
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 26/263 (9%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELNILRQT 109
L E + LG+G G V+ R KQ+ + ALKV+ Q ++ + +E+ I
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
P I++ + F + V +++EY G++ ++ + E T ++ L Y
Sbjct: 92 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 150
Query: 170 HSRNIVHRDIKPANVLINEKME---HPCGYSCLYESGEAR-----------HRKHGGYNG 215
HS+ ++HRDIKP N+L+ E G+S S G +
Sbjct: 151 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHD 210
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
D+WS GV E +G PF E + R + P+ +E RD I
Sbjct: 211 EKVDLWSLGVLCYEFLVGKPPF-----EANTYQETYKRISRVEFTFPDFVTEGARDLISR 265
Query: 276 CLQKGDPSKRWTASQLLSHPFLA 298
L K +PS+R ++L HP++
Sbjct: 266 LL-KHNPSQRPMLREVLEHPWIT 287
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 26/263 (9%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELNILRQT 109
L E + LG+G G V+ R KQ+ + ALKV+ Q ++ + +E+ I
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
P I++ + F + V +++EY G++ ++ + E T ++ L Y
Sbjct: 92 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 150
Query: 170 HSRNIVHRDIKPANVLINEKME---HPCGYSCLYESGEAR-----------HRKHGGYNG 215
HS+ ++HRDIKP N+L+ E G+S S G +
Sbjct: 151 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHD 210
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
D+WS GV E +G PF E + R + P+ +E RD I
Sbjct: 211 EKVDLWSLGVLCYEFLVGKPPF-----EANTYQETYKRISRVEFTFPDFVTEGARDLISR 265
Query: 276 CLQKGDPSKRWTASQLLSHPFLA 298
L K +PS+R ++L HP++
Sbjct: 266 LL-KHNPSQRPMLREVLEHPWIT 287
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 26/263 (9%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELNILRQT 109
L E + LG+G G V+ R KQ+ + ALKV+ Q ++ + +E+ I
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
P I++ + F + V +++EY G++ ++ + E T ++ L Y
Sbjct: 71 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 129
Query: 170 HSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEAR-----------HRKHGGYNG 215
HS+ ++HRDIKP N+L+ E G+S S G +
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHD 189
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
D+WS GV E +G PF E + R + P+ +E RD I
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPF-----EANTYQETYKRISRVEFTFPDFVTEGARDLISR 244
Query: 276 CLQKGDPSKRWTASQLLSHPFLA 298
L K +PS+R ++L HP++
Sbjct: 245 LL-KHNPSQRPMLREVLEHPWIT 266
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 26/263 (9%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELNILRQT 109
L E + LG+G G V+ R KQ+ + ALKV+ Q ++ + +E+ I
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
P I++ + F + V +++EY G++ ++ + E T ++ L Y
Sbjct: 66 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 170 HSRNIVHRDIKPANVLINEKME---HPCGYSCLYESGEAR-----------HRKHGGYNG 215
HS+ ++HRDIKP N+L+ E G+S S G +
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLPPEMIEGRMHD 184
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
D+WS GV E +G PF E + R + P+ +E RD I
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPF-----EANTYQETYKRISRVEFTFPDFVTEGARDLISR 239
Query: 276 CLQKGDPSKRWTASQLLSHPFLA 298
L K +PS+R ++L HP++
Sbjct: 240 LL-KHNPSQRPMLREVLEHPWIT 261
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 26/263 (9%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELNILRQT 109
L E + LG+G G V+ R KQ+ + ALKV+ Q ++ + +E+ I
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
P I++ + F + V +++EY G++ ++ + E T ++ L Y
Sbjct: 83 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 141
Query: 170 HSRNIVHRDIKPANVLINEKME---HPCGYSCLYESGEAR-----------HRKHGGYNG 215
HS+ ++HRDIKP N+L+ E G+S S G +
Sbjct: 142 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHD 201
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
D+WS GV E +G PF E + R + P+ +E RD I
Sbjct: 202 EKVDLWSLGVLCYEFLVGKPPF-----EANTYQETYKRISRVEFTFPDFVTEGARDLISR 256
Query: 276 CLQKGDPSKRWTASQLLSHPFLA 298
L K +PS+R ++L HP++
Sbjct: 257 LL-KHNPSQRPMLREVLEHPWIT 278
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 26/263 (9%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELNILRQT 109
L E + LG+G G V+ R KQ+ + ALKV+ Q ++ + +E+ I
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
P I++ + F + V +++EY G++ ++ + E T ++ L Y
Sbjct: 68 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 126
Query: 170 HSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEAR-----------HRKHGGYNG 215
HS+ ++HRDIKP N+L+ E G+S S G +
Sbjct: 127 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHD 186
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
D+WS GV E +G PF E + R + P+ +E RD I
Sbjct: 187 EKVDLWSLGVLCYEFLVGKPPF-----EANTYQETYKRISRVEFTFPDFVTEGARDLISR 241
Query: 276 CLQKGDPSKRWTASQLLSHPFLA 298
L K +PS+R ++L HP++
Sbjct: 242 LL-KHNPSQRPMLREVLEHPWIT 263
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 26/263 (9%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELNILRQT 109
L E + LG+G G V+ R KQ+ + ALKV+ Q ++ + +E+ I
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
P I++ + F + V +++EY G++ ++ + E T ++ L Y
Sbjct: 69 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 170 HSRNIVHRDIKPANVLINEKME---HPCGYSCLYESGEAR-----------HRKHGGYNG 215
HS+ ++HRDIKP N+L+ E G+S S G +
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHD 187
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
D+WS GV E +G PF E + R + P+ +E RD I
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPF-----EANTYQETYKRISRVEFTFPDFVTEGARDLISR 242
Query: 276 CLQKGDPSKRWTASQLLSHPFLA 298
L K +PS+R ++L HP++
Sbjct: 243 LL-KHNPSQRPMLREVLEHPWIT 264
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 26/263 (9%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELNILRQT 109
L E + LG+G G V+ R KQ+ + ALKV+ Q ++ + +E+ I
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
P I++ + F + V +++EY G++ ++ + E T ++ L Y
Sbjct: 69 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 170 HSRNIVHRDIKPANVLINEKME---HPCGYSCLYESGEAR-----------HRKHGGYNG 215
HS+ ++HRDIKP N+L+ E G+S S G +
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHD 187
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
D+WS GV E +G PF E + R + P+ +E RD I
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPF-----EANTYQETYKRISRVEFTFPDFVTEGARDLISR 242
Query: 276 CLQKGDPSKRWTASQLLSHPFLA 298
L K +PS+R ++L HP++
Sbjct: 243 LL-KHNPSQRPMLREVLEHPWIT 264
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 26/263 (9%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELNILRQT 109
L E + LG+G G V+ R KQ+ + ALKV+ Q ++ + +E+ I
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
P I++ + F + V +++EY G++ ++ + E T ++ L Y
Sbjct: 69 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 170 HSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEAR-----------HRKHGGYNG 215
HS+ ++HRDIKP N+L+ E G+S S G +
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHD 187
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
D+WS GV E +G PF E + R + P+ +E RD I
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPF-----EANTYQETYKRISRVEFTFPDFVTEGARDLISR 242
Query: 276 CLQKGDPSKRWTASQLLSHPFLA 298
L K +PS+R ++L HP++
Sbjct: 243 LL-KHNPSQRPMLREVLEHPWIT 264
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 26/263 (9%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELNILRQT 109
L E + LG+G G V+ R KQ+ + ALKV+ Q ++ + +E+ I
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
P I++ + F + V +++EY G++ ++ + E T ++ L Y
Sbjct: 69 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 170 HSRNIVHRDIKPANVLINEKME---HPCGYSCLYESGEAR-----------HRKHGGYNG 215
HS+ ++HRDIKP N+L+ E G+S S G +
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHD 187
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
D+WS GV E +G PF E + R + P+ +E RD I
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPF-----EANTYQETYKRISRVEFTFPDFVTEGARDLISR 242
Query: 276 CLQKGDPSKRWTASQLLSHPFLA 298
L K +PS+R ++L HP++
Sbjct: 243 LL-KHNPSQRPMLREVLEHPWIT 264
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 26/263 (9%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELNILRQT 109
L E + LG+G G V+ R KQ+ + ALKV+ Q ++ + +E+ I
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
P I++ + F + V +++EY G++ ++ + E T ++ L Y
Sbjct: 65 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 123
Query: 170 HSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEAR-----------HRKHGGYNG 215
HS+ ++HRDIKP N+L+ E G+S S G +
Sbjct: 124 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHD 183
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
D+WS GV E +G PF E + R + P+ +E RD I
Sbjct: 184 EKVDLWSLGVLCYEFLVGKPPF-----EANTYQETYKRISRVEFTFPDFVTEGARDLISR 238
Query: 276 CLQKGDPSKRWTASQLLSHPFLA 298
L K +PS+R ++L HP++
Sbjct: 239 LL-KHNPSQRPMLREVLEHPWIT 260
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 110/263 (41%), Gaps = 26/263 (9%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELNILRQT 109
L E + LG+G G V+ R KQ+ + ALKV+ Q ++ + +E+ I
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
P I++ + F + V +++EY G + ++ + E T ++ L Y
Sbjct: 71 RHPNILRLYGYFHDAT-RVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYC 129
Query: 170 HSRNIVHRDIKPANVLINEKME---HPCGYSCLYESGEARHRK-----------HGGYNG 215
HS+ ++HRDIKP N+L+ E G+S S G +
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIEGRMHD 189
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
D+WS GV E +G PF E + R + P+ +E RD I
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPF-----EANTYQETYKRISRVEFTFPDFVTEGARDLISR 244
Query: 276 CLQKGDPSKRWTASQLLSHPFLA 298
L K +PS+R ++L HP++
Sbjct: 245 LL-KHNPSQRPMLREVLEHPWIT 266
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 26/263 (9%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELNILRQT 109
L E + LG+G G V+ R KQ+ + ALKV+ Q ++ + +E+ I
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
P I++ + F + V +++EY G++ ++ + E T ++ L Y
Sbjct: 71 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 129
Query: 170 HSRNIVHRDIKPANVLINEKME---HPCGYSCLYESGEAR-----------HRKHGGYNG 215
HS+ ++HRDIKP N+L+ E G+S S G +
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHD 189
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
D+WS GV E +G PF E + R + P+ +E RD I
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPF-----EANTYQETYKRISRVEFTFPDFVTEGARDLISR 244
Query: 276 CLQKGDPSKRWTASQLLSHPFLA 298
L K +PS+R ++L HP++
Sbjct: 245 LL-KHNPSQRPMLREVLEHPWIT 266
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 26/263 (9%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELNILRQT 109
L E + LG+G G V+ R KQ+ + ALKV+ Q ++ + +E+ I
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
P I++ + F + V +++EY G++ ++ + E T ++ L Y
Sbjct: 66 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 170 HSRNIVHRDIKPANVLINEKME---HPCGYSCLYESGEAR-----------HRKHGGYNG 215
HS+ ++HRDIKP N+L+ E G+S S G +
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHD 184
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
D+WS GV E +G PF E + R + P+ +E RD I
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPF-----EANTYQETYKRISRVEFTFPDFVTEGARDLISR 239
Query: 276 CLQKGDPSKRWTASQLLSHPFLA 298
L K +PS+R ++L HP++
Sbjct: 240 LL-KHNPSQRPMLREVLEHPWIT 261
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 26/263 (9%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELNILRQT 109
L E + LG+G G V+ R KQ+ + ALKV+ Q ++ + +E+ I
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
P I++ + F + V +++EY G++ ++ + E T ++ L Y
Sbjct: 66 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 170 HSRNIVHRDIKPANVLINEKME---HPCGYSCLYESGEAR-----------HRKHGGYNG 215
HS+ ++HRDIKP N+L+ E G+S S G +
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHD 184
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
D+WS GV E +G PF E + R + P+ +E RD I
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPF-----EANTYQETYKRISRVEFTFPDFVTEGARDLISR 239
Query: 276 CLQKGDPSKRWTASQLLSHPFLA 298
L K +PS+R ++L HP++
Sbjct: 240 LL-KHNPSQRPMLREVLEHPWIT 261
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 26/263 (9%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELNILRQT 109
L E + LG+G G V+ R KQ+ + ALKV+ Q ++ + +E+ I
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
P I++ + F + V +++EY G++ ++ + E T ++ L Y
Sbjct: 70 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 128
Query: 170 HSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEAR-----------HRKHGGYNG 215
HS+ ++HRDIKP N+L+ E G+S S G +
Sbjct: 129 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHD 188
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
D+WS GV E +G PF E + R + P+ +E RD I
Sbjct: 189 EKVDLWSLGVLCYEFLVGKPPF-----EANTYQETYKRISRVEFTFPDFVTEGARDLISR 243
Query: 276 CLQKGDPSKRWTASQLLSHPFLA 298
L K +PS+R ++L HP++
Sbjct: 244 LL-KHNPSQRPMLREVLEHPWIT 265
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 26/263 (9%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELNILRQT 109
L E + LG+G G V+ R KQ+ + ALKV+ Q ++ + +E+ I
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
P I++ + F + V +++EY G++ ++ + E T ++ L Y
Sbjct: 68 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 126
Query: 170 HSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEAR-----------HRKHGGYNG 215
HS+ ++HRDIKP N+L+ E G+S S G +
Sbjct: 127 HSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHD 186
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
D+WS GV E +G PF E + R + P+ +E RD I
Sbjct: 187 EKVDLWSLGVLCYEFLVGKPPF-----EANTYQETYKRISRVEFTFPDFVTEGARDLISR 241
Query: 276 CLQKGDPSKRWTASQLLSHPFLA 298
L K +PS+R ++L HP++
Sbjct: 242 LL-KHNPSQRPMLREVLEHPWIT 263
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 26/263 (9%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELNILRQT 109
L E + LG+G G V+ R KQ+ + ALKV+ Q ++ + +E+ I
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
P I++ + F + V +++EY G++ ++ + E T ++ L Y
Sbjct: 66 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 170 HSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEAR-----------HRKHGGYNG 215
HS+ ++HRDIKP N+L+ E G+S S G +
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHD 184
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
D+WS GV E +G PF E + R + P+ +E RD I
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPF-----EANTYQETYKRISRVEFTFPDFVTEGARDLISR 239
Query: 276 CLQKGDPSKRWTASQLLSHPFLA 298
L K +PS+R ++L HP++
Sbjct: 240 LL-KHNPSQRPMLREVLEHPWIT 261
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 26/263 (9%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELNILRQT 109
L E + LG+G G V+ R KQ+ + ALKV+ Q ++ + +E+ I
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
P I++ + F + V +++EY G++ ++ + E T ++ L Y
Sbjct: 67 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 125
Query: 170 HSRNIVHRDIKPANVLINEKME---HPCGYSCLYESGEAR-----------HRKHGGYNG 215
HS+ ++HRDIKP N+L+ E G+S S G +
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHD 185
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
D+WS GV E +G PF E + R + P+ +E RD I
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPF-----EANTYQETYKRISRVEFTFPDFVTEGARDLISR 240
Query: 276 CLQKGDPSKRWTASQLLSHPFLA 298
L K +PS+R ++L HP++
Sbjct: 241 LL-KHNPSQRPMLREVLEHPWIT 262
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 125/301 (41%), Gaps = 68/301 (22%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP----QELNILRQTNS 111
+ +K++ +G+G G V+K R+K T + AL ++ D T P +E+++L++ N
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 112 PYIVKCHQIFTKPSGEVSI-------LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
P IVK + + + L ++MDA +L + +I + Q+L+
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALT-------GIPLPLIKSYLFQLLQ 114
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHG-------- 211
GL + HS ++HRD+KP N+LIN + G L + G AR R +
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYTHEVVTLWY 169
Query: 212 ---------GYNGFAADIWSFG------VTMMELYMG-------YYPFLEPGQEPDFLSL 249
Y A DIWS G VT L+ G + F G + +
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 250 MLAICFREPPSLPECSSEKFRDFIRCCLQKG----------DPSKRWTASQLLSHPFLAD 299
+ PS P+ + + F + + G DP+KR +A L+HPF D
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Query: 300 A 300
Sbjct: 290 V 290
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 125/301 (41%), Gaps = 68/301 (22%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP----QELNILRQTNS 111
+ +K++ +G+G G V+K R+K T + AL ++ D T P +E+++L++ N
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 112 PYIVKCHQIFTKPSGEVSI-------LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
P IVK + + + L ++MDA +L + +I + Q+L+
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALT-------GIPLPLIKSYLFQLLQ 113
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHG-------- 211
GL + HS ++HRD+KP N+LIN + G L + G AR R +
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRTYTHEVVTLWY 168
Query: 212 ---------GYNGFAADIWSFG------VTMMELYMG-------YYPFLEPGQEPDFLSL 249
Y A DIWS G VT L+ G + F G + +
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 228
Query: 250 MLAICFREPPSLPECSSEKFRDFIRCCLQKG----------DPSKRWTASQLLSHPFLAD 299
+ PS P+ + + F + + G DP+KR +A L+HPF D
Sbjct: 229 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
Query: 300 A 300
Sbjct: 289 V 289
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 26/263 (9%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELNILRQT 109
L E + LG+G G V+ R KQ+ + ALKV+ Q ++ + +E+ I
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
P I++ + F + V +++EY G++ ++ + E T ++ L Y
Sbjct: 66 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 170 HSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEAR-----------HRKHGGYNG 215
HS+ ++HRDIKP N+L+ E G+S S G +
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHD 184
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
D+WS GV E +G PF E + R + P+ +E RD I
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPF-----EANTYQETYKRISRVEFTFPDFVTEGARDLISR 239
Query: 276 CLQKGDPSKRWTASQLLSHPFLA 298
L K +PS+R ++L HP++
Sbjct: 240 LL-KHNPSQRPMLREVLEHPWIT 261
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 26/263 (9%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELNILRQT 109
L E + LG+G G V+ R KQ+ + ALKV+ Q ++ + +E+ I
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
P I++ + F + V +++EY G++ ++ + E T ++ L Y
Sbjct: 69 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 170 HSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEAR-----------HRKHGGYNG 215
HS+ ++HRDIKP N+L+ E G+S S G +
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHD 187
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
D+WS GV E +G PF E + R + P+ +E RD I
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPF-----EANTYQETYKRISRVEFTFPDFVTEGARDLISR 242
Query: 276 CLQKGDPSKRWTASQLLSHPFLA 298
L K +PS+R ++L HP++
Sbjct: 243 LL-KHNPSQRPMLREVLEHPWIT 264
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 26/263 (9%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELNILRQT 109
L E + LG+G G V+ R KQ+ + ALKV+ Q ++ + +E+ I
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
P I++ + F + V +++EY G++ ++ + E T ++ L Y
Sbjct: 67 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 125
Query: 170 HSRNIVHRDIKPANVLINEKME---HPCGYSCLYESGEAR-----------HRKHGGYNG 215
HS+ ++HRDIKP N+L+ E G+S S G +
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHD 185
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
D+WS GV E +G PF E + R + P+ +E RD I
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPF-----EANTYQETYKRISRVEFTFPDFVTEGARDLISR 240
Query: 276 CLQKGDPSKRWTASQLLSHPFLA 298
L K +PS+R ++L HP++
Sbjct: 241 LL-KHNPSQRPMLREVLEHPWIT 262
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 26/263 (9%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELNILRQT 109
L E + LG+G G V+ R KQ+ + ALKV+ Q ++ + +E+ I
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
P I++ + F + V +++EY G++ ++ + E T ++ L Y
Sbjct: 69 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 170 HSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEAR-----------HRKHGGYNG 215
HS+ ++HRDIKP N+L+ E G+S S G +
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHD 187
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
D+WS GV E +G PF E + R + P+ +E RD I
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPF-----EANTYQETYKRISRVEFTFPDFVTEGARDLISR 242
Query: 276 CLQKGDPSKRWTASQLLSHPFLA 298
L K +PS+R ++L HP++
Sbjct: 243 LL-KHNPSQRPMLREVLEHPWIT 264
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 116/270 (42%), Gaps = 34/270 (12%)
Query: 60 EKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDR-------GTPPNPQELNILRQTNSP 112
E +V+G+G V + +++T +A+K++ + T +E +I P
Sbjct: 29 ELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHP 88
Query: 113 YIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR----LSEDIICTISRQVLKGLFY 168
+IV+ + ++ G + ++ E+MD L + R SE + RQ+L+ L Y
Sbjct: 89 HIVELLETYSS-DGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 169 MHSRNIVHRDIKPANVLINEKMEHP----CGYSCLYESGEARHRKHG--GYNGFAA---- 218
H NI+HRD+KP VL+ K G+ + GE+ G G F A
Sbjct: 148 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV 207
Query: 219 ---------DIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
D+W GV + L G PF G + ++ ++ P SE
Sbjct: 208 KREPYGKPVDVWGCGVILFILLSGCLPFY--GTKERLFEGIIKGKYKMNPRQWSHISESA 265
Query: 270 RDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299
+D +R L DP++R T + L+HP+L +
Sbjct: 266 KDLVRRMLML-DPAERITVYEALNHPWLKE 294
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 110/263 (41%), Gaps = 26/263 (9%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELNILRQT 109
L E + LG+G G V+ R KQ+ + ALKV+ Q ++ + +E+ I
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
P I++ + F + V +++EY G + ++ + E T ++ L Y
Sbjct: 71 RHPNILRLYGYFHDAT-RVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYC 129
Query: 170 HSRNIVHRDIKPANVLINEKME---HPCGYSCLYESGEAR-----------HRKHGGYNG 215
HS+ ++HRDIKP N+L+ E G+S S G +
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHD 189
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
D+WS GV E +G PF E + R + P+ +E RD I
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPF-----EANTYQETYKRISRVEFTFPDFVTEGARDLISR 244
Query: 276 CLQKGDPSKRWTASQLLSHPFLA 298
L K +PS+R ++L HP++
Sbjct: 245 LL-KHNPSQRPMLREVLEHPWIT 266
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 116/270 (42%), Gaps = 34/270 (12%)
Query: 60 EKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDR-------GTPPNPQELNILRQTNSP 112
E +V+G+G V + +++T +A+K++ + T +E +I P
Sbjct: 27 ELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHP 86
Query: 113 YIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR----LSEDIICTISRQVLKGLFY 168
+IV+ + ++ G + ++ E+MD L + R SE + RQ+L+ L Y
Sbjct: 87 HIVELLETYSS-DGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 169 MHSRNIVHRDIKPANVLINEKMEHP----CGYSCLYESGEARHRKHG--GYNGFAA---- 218
H NI+HRD+KP VL+ K G+ + GE+ G G F A
Sbjct: 146 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV 205
Query: 219 ---------DIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
D+W GV + L G PF G + ++ ++ P SE
Sbjct: 206 KREPYGKPVDVWGCGVILFILLSGCLPFY--GTKERLFEGIIKGKYKMNPRQWSHISESA 263
Query: 270 RDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299
+D +R L DP++R T + L+HP+L +
Sbjct: 264 KDLVRRMLML-DPAERITVYEALNHPWLKE 292
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 115/288 (39%), Gaps = 53/288 (18%)
Query: 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALK-VMQCDRGTPPNPQELNILRQTNSPYIV 115
S E++ VLGQG G V K R+ YA+K + + E+ +L N Y+V
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVV 65
Query: 116 KCH------QIFTKPSGEVS------ILMEYMDAGSLEIYVKSRG-RLSEDIICTISRQV 162
+ + + F KP V I MEY + +L + S D + RQ+
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQI 125
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY-------------------------- 196
L+ L Y+HS+ I+HRD+KP N+ I+E G
Sbjct: 126 LEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 197 -------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSL 249
+ +Y + E G YN D++S G+ E+ YPF + + L
Sbjct: 186 NLTSAIGTAMYVATEVLDGT-GHYNE-KIDMYSLGIIFFEM---IYPFSTGMERVNILKK 240
Query: 250 MLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297
+ ++ PP + + + IR + DP+KR A LL+ +L
Sbjct: 241 LRSVSIEFPPDFDDNKMKVEKKIIRLLIDH-DPNKRPGARTLLNSGWL 287
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 122/275 (44%), Gaps = 51/275 (18%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNI-LRQTNSPYIVKCHQIF 121
QVLG G G V ++ +K+T +ALK +Q P +E+ + R + P+IV+ ++
Sbjct: 68 QVLGLGINGKVLQIFNKRTQEKFALKXLQ---DCPKARREVELHWRASQCPHIVRIVDVY 124
Query: 122 TKP-SGEVSILM--EYMDAGSLEIYVKSRGR--LSEDIICTISRQVLKGLFYMHSRNIVH 176
+G +L+ E +D G L ++ RG +E I + + + + Y+HS NI H
Sbjct: 125 ENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAH 184
Query: 177 RDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFAA------------------ 218
RD+KP N+L K P L + G A ++ +N
Sbjct: 185 RDVKPENLLYTSK--RPNAILKLTDFGFA--KETTSHNSLTTPCYTPYYVAPEVLGPEKY 240
Query: 219 ----DIWSFGVTMMELYMGYYPF-------LEPGQEPDFLSLMLAICFREPPSLPECS-- 265
D WS GV L GY PF + PG + + E P+ PE S
Sbjct: 241 DKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXK-----TRIRXGQYEFPN-PEWSEV 294
Query: 266 SEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
SE+ + IR L K +P++R T ++ +HP++ +
Sbjct: 295 SEEVKXLIRNLL-KTEPTQRXTITEFXNHPWIXQS 328
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 117/272 (43%), Gaps = 41/272 (15%)
Query: 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTN------ 110
S L+V+G+G+ G V RHK YA+KV+Q + +E +I+ + N
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQ-KKAILKKKEEKHIMSERNVLLKNV 96
Query: 111 -SPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
P++V H F + + ++ +++Y++ G L +++ E + ++ L Y+
Sbjct: 97 KHPFLVGLHFSF-QTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYL 155
Query: 170 HSRNIVHRDIKPANVLIN--------------EKMEHPCGYSCL-----YESGEARHRKH 210
HS NIV+RD+KP N+L++ E +EH S Y + E H++
Sbjct: 156 HSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQ- 214
Query: 211 GGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFR 270
Y+ D W G + E+ G PF + M +P L + R
Sbjct: 215 -PYDR-TVDWWCLGAVLYEMLYGLPPFYSRNT-----AEMYDNILNKPLQLKPNITNSAR 267
Query: 271 DFIRCCLQKGDPSKRWTAS----QLLSHPFLA 298
+ LQK D +KR A ++ SH F +
Sbjct: 268 HLLEGLLQK-DRTKRLGAKDDFMEIKSHVFFS 298
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 110/257 (42%), Gaps = 29/257 (11%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ----ELNILRQTNSPYIVKC 117
L+ +G+GN V RH T A+K++ + + Q E+ I++ N P IVK
Sbjct: 12 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 71
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
++ + + ++MEY G + Y+ + G + E RQ++ + Y H + IVHR
Sbjct: 72 FEVI-ETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIVHR 130
Query: 178 DIKPANVLINEKME---HPCGYSCLYESGEARHRKHGG-------------YNGFAADIW 221
D+K N+L++ M G+S + G G Y+G D+W
Sbjct: 131 DLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVW 190
Query: 222 SFGVTMMELYMGYYPFLEPGQE-PDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKG 280
S GV + L G PF GQ + +L +R P + + F+
Sbjct: 191 SLGVILYTLVSGSLPF--DGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLIL----- 243
Query: 281 DPSKRWTASQLLSHPFL 297
+PSKR T Q++ ++
Sbjct: 244 NPSKRGTLEQIMKDRWM 260
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 40 NLVHTEAASYGQEIDGL-SQLEKLQVLGQGNGGTVFK-VRHKQTLALYALKVMQCDR--- 94
N +H + G+E + L SQ + +LG G G+V+ +R L + A+K ++ DR
Sbjct: 18 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV-AIKHVEKDRISD 76
Query: 95 -GTPPN----PQELNILRQTNSPY--IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSR 147
G PN P E+ +L++ +S + +++ F +P V IL L ++ R
Sbjct: 77 WGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER 136
Query: 148 GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLIN------EKMEHPCGY---SC 198
G L E++ + QVL+ + + H+ ++HRDIK N+LI+ + ++ G
Sbjct: 137 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 196
Query: 199 LYESGEARHR-------KHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLML 251
+Y + ++ Y+G +A +WS G+ + ++ G PF E D +
Sbjct: 197 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRG 251
Query: 252 AICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
+ FR+ S EC + IR CL PS R T ++ +HP++ D
Sbjct: 252 QVFFRQRVS-SEC-----QHLIRWCLAL-RPSDRPTFEEIQNHPWMQDV 293
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 121/263 (46%), Gaps = 38/263 (14%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDR-GTPPNPQ---ELNILRQTNS-PYIVKCHQ 119
LG+G V + K T YA K ++ R G + E+ +L S P ++ H+
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE 96
Query: 120 IFTKPSGEVSILMEYMDAGSLEIYV----KSRGRLSEDIICTISRQVLKGLFYMHSRNIV 175
++ S E+ +++EY G EI+ + +SE+ + + +Q+L+G++Y+H NIV
Sbjct: 97 VYENTS-EIILILEYAAGG--EIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIV 153
Query: 176 HRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHG------------------GYN--G 215
H D+KP N+L++ +P G + + G +R H Y+
Sbjct: 154 HLDLKPQNILLSSI--YPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPIT 211
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSL-MLAICFREPPSLPECSSEKFRDFIR 274
A D+W+ G+ L PF+ + +L++ + + + E S+ DFI+
Sbjct: 212 TATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETF--SSVSQLATDFIQ 269
Query: 275 CCLQKGDPSKRWTASQLLSHPFL 297
L K +P KR TA LSH +L
Sbjct: 270 SLLVK-NPEKRPTAEICLSHSWL 291
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 40 NLVHTEAASYGQEIDGL-SQLEKLQVLGQGNGGTVFK-VRHKQTLALYALKVMQCDR--- 94
N +H + G+E + L SQ + +LG G G+V+ +R L + A+K ++ DR
Sbjct: 5 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV-AIKHVEKDRISD 63
Query: 95 -GTPPN----PQELNILRQTNSPY--IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSR 147
G PN P E+ +L++ +S + +++ F +P V IL L ++ R
Sbjct: 64 WGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER 123
Query: 148 GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLIN------EKMEHPCGY---SC 198
G L E++ + QVL+ + + H+ ++HRDIK N+LI+ + ++ G
Sbjct: 124 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 183
Query: 199 LYESGEARHR-------KHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLML 251
+Y + ++ Y+G +A +WS G+ + ++ G PF E D +
Sbjct: 184 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRG 238
Query: 252 AICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
+ FR+ S EC + IR CL PS R T ++ +HP++ D
Sbjct: 239 QVFFRQRVSX-EC-----QHLIRWCLAL-RPSDRPTFEEIQNHPWMQDV 280
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 40 NLVHTEAASYGQEIDGL-SQLEKLQVLGQGNGGTVFK-VRHKQTLALYALKVMQCDR--- 94
N +H + G+E + L SQ + +LG G G+V+ +R L + A+K ++ DR
Sbjct: 25 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV-AIKHVEKDRISD 83
Query: 95 -GTPPN----PQELNILRQTNSPY--IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSR 147
G PN P E+ +L++ +S + +++ F +P V IL L ++ R
Sbjct: 84 WGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER 143
Query: 148 GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLIN------EKMEHPCGY---SC 198
G L E++ + QVL+ + + H+ ++HRDIK N+LI+ + ++ G
Sbjct: 144 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 203
Query: 199 LYESGEARHR-------KHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLML 251
+Y + ++ Y+G +A +WS G+ + ++ G PF E D +
Sbjct: 204 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRG 258
Query: 252 AICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
+ FR+ S EC + IR CL PS R T ++ +HP++ D
Sbjct: 259 QVFFRQRVS-SEC-----QHLIRWCLAL-RPSDRPTFEEIQNHPWMQDV 300
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 110/263 (41%), Gaps = 26/263 (9%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELNILRQT 109
L E + LG+G G V+ R KQ + ALKV+ Q ++ + +E+ I
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
P I++ + F + V +++EY G++ ++ + E T ++ L Y
Sbjct: 63 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 121
Query: 170 HSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEAR-----------HRKHGGYNG 215
HS+ ++HRDIKP N+L+ E G+S S G +
Sbjct: 122 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHD 181
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
D+WS GV E +G PF E + R + P+ +E RD I
Sbjct: 182 EKVDLWSLGVLCYEFLVGKPPF-----EANTYQETYKRISRVEFTFPDFVTEGARDLISR 236
Query: 276 CLQKGDPSKRWTASQLLSHPFLA 298
L K +PS+R ++L HP++
Sbjct: 237 LL-KHNPSQRPMLREVLEHPWIT 258
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 40 NLVHTEAASYGQEIDGL-SQLEKLQVLGQGNGGTVFK-VRHKQTLALYALKVMQCDR--- 94
N +H + G+E + L SQ + +LG G G+V+ +R L + A+K ++ DR
Sbjct: 6 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV-AIKHVEKDRISD 64
Query: 95 -GTPPN----PQELNILRQTNSPY--IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSR 147
G PN P E+ +L++ +S + +++ F +P V IL L ++ R
Sbjct: 65 WGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER 124
Query: 148 GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLIN------EKMEHPCGY---SC 198
G L E++ + QVL+ + + H+ ++HRDIK N+LI+ + ++ G
Sbjct: 125 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 184
Query: 199 LYESGEARHR-------KHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLML 251
+Y + ++ Y+G +A +WS G+ + ++ G PF E D +
Sbjct: 185 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRG 239
Query: 252 AICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
+ FR+ S EC + IR CL PS R T ++ +HP++ D
Sbjct: 240 QVFFRQRVS-SEC-----QHLIRWCLAL-RPSDRPTFEEIQNHPWMQDV 281
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 40 NLVHTEAASYGQEIDGL-SQLEKLQVLGQGNGGTVFK-VRHKQTLALYALKVMQCDR--- 94
N +H + G+E + L SQ + +LG G G+V+ +R L + A+K ++ DR
Sbjct: 33 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV-AIKHVEKDRISD 91
Query: 95 -GTPPN----PQELNILRQTNSPY--IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSR 147
G PN P E+ +L++ +S + +++ F +P V IL L ++ R
Sbjct: 92 WGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER 151
Query: 148 GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLIN------EKMEHPCGY---SC 198
G L E++ + QVL+ + + H+ ++HRDIK N+LI+ + ++ G
Sbjct: 152 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 211
Query: 199 LYESGEARHR-------KHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLML 251
+Y + ++ Y+G +A +WS G+ + ++ G PF E D +
Sbjct: 212 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRG 266
Query: 252 AICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
+ FR+ S EC + IR CL PS R T ++ +HP++ D
Sbjct: 267 QVFFRQRVSX-EC-----QHLIRWCLAL-RPSDRPTFEEIQNHPWMQDV 308
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 40 NLVHTEAASYGQEIDGL-SQLEKLQVLGQGNGGTVFK-VRHKQTLALYALKVMQCDR--- 94
N +H + G+E + L SQ + +LG G G+V+ +R L + A+K ++ DR
Sbjct: 5 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV-AIKHVEKDRISD 63
Query: 95 -GTPPN----PQELNILRQTNSPY--IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSR 147
G PN P E+ +L++ +S + +++ F +P V IL L ++ R
Sbjct: 64 WGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER 123
Query: 148 GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLIN------EKMEHPCGY---SC 198
G L E++ + QVL+ + + H+ ++HRDIK N+LI+ + ++ G
Sbjct: 124 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 183
Query: 199 LYESGEARHR-------KHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLML 251
+Y + ++ Y+G +A +WS G+ + ++ G PF E D +
Sbjct: 184 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRG 238
Query: 252 AICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
+ FR+ S EC + IR CL PS R T ++ +HP++ D
Sbjct: 239 QVFFRQRVS-SEC-----QHLIRWCLAL-RPSDRPTFEEIQNHPWMQDV 280
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 40 NLVHTEAASYGQEIDGL-SQLEKLQVLGQGNGGTVFK-VRHKQTLALYALKVMQCDR--- 94
N +H + G+E + L SQ + +LG G G+V+ +R L + A+K ++ DR
Sbjct: 6 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV-AIKHVEKDRISD 64
Query: 95 -GTPPN----PQELNILRQTNSPY--IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSR 147
G PN P E+ +L++ +S + +++ F +P V IL L ++ R
Sbjct: 65 WGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER 124
Query: 148 GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLIN------EKMEHPCGY---SC 198
G L E++ + QVL+ + + H+ ++HRDIK N+LI+ + ++ G
Sbjct: 125 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 184
Query: 199 LYESGEARHR-------KHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLML 251
+Y + ++ Y+G +A +WS G+ + ++ G PF E D +
Sbjct: 185 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRG 239
Query: 252 AICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
+ FR+ S EC + IR CL PS R T ++ +HP++ D
Sbjct: 240 QVFFRQRVSX-EC-----QHLIRWCLAL-RPSDRPTFEEIQNHPWMQDV 281
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 104/230 (45%), Gaps = 23/230 (10%)
Query: 26 LVTQLNIPKPVSCPNLVHTEAASYGQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALY 85
L T+L PK + E G ++ + +L+ LQ +G+G G V ++
Sbjct: 163 LCTRLIKPKVMEGTVAAQDEFYRSGWALN-MKELKLLQTIGKGEFGDVMLGDYRGNKV-- 219
Query: 86 ALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVK 145
A+K ++ D E +++ Q +V+ + + G + I+ EYM GSL Y++
Sbjct: 220 AVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR 279
Query: 146 SRGR--LSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESG 203
SRGR L D + S V + + Y+ N VHRD+ NVL++E ++ S +
Sbjct: 280 SRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSE--DNVAKVSDFGLTK 337
Query: 204 EARHRKHGGY-------------NGFA--ADIWSFGVTMMELY-MGYYPF 237
EA + G F+ +D+WSFG+ + E+Y G P+
Sbjct: 338 EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 387
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 104/231 (45%), Gaps = 30/231 (12%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCD-----RGTPPNPQELNILRQTN 110
L + L+ LG G+ G V +R + YA+KV++ + + E +L
Sbjct: 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT 64
Query: 111 SPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMH 170
P+I++ F + + ++ ++M+Y++ G L ++ R + + +V L Y+H
Sbjct: 65 HPFIIRMWGTF-QDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLH 123
Query: 171 SRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYN---------------- 214
S++I++RD+KP N+L+++ G+ + + G A++ Y
Sbjct: 124 SKDIIYRDLKPENILLDKN-----GHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVVSTK 178
Query: 215 --GFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPE 263
+ D WSFG+ + E+ GY PF + + ++ A R PP E
Sbjct: 179 PYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA-ELRFPPFFNE 228
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 40 NLVHTEAASYGQEIDGL-SQLEKLQVLGQGNGGTVFK-VRHKQTLALYALKVMQCDR--- 94
N +H + G+E + L SQ + +LG G G+V+ +R L + A+K ++ DR
Sbjct: 33 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV-AIKHVEKDRISD 91
Query: 95 -GTPPN----PQELNILRQTNSPY--IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSR 147
G PN P E+ +L++ +S + +++ F +P V IL L ++ R
Sbjct: 92 WGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER 151
Query: 148 GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLIN------EKMEHPCGY---SC 198
G L E++ + QVL+ + + H+ ++HRDIK N+LI+ + ++ G
Sbjct: 152 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 211
Query: 199 LYESGEARHR-------KHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLML 251
+Y + ++ Y+G +A +WS G+ + ++ G PF E D +
Sbjct: 212 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRG 266
Query: 252 AICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
+ FR+ S EC + IR CL PS R T ++ +HP++ D
Sbjct: 267 QVFFRQRVS-SEC-----QHLIRWCLAL-RPSDRPTFEEIQNHPWMQDV 308
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 117/254 (46%), Gaps = 36/254 (14%)
Query: 57 SQLEKLQVLGQGNGGTVFK---VRHKQTLAL-YALKVMQCDRGTPPNPQELN---ILRQT 109
++L++++VLG G GTV+K V +T+ + A+K++ G N + ++ I+
Sbjct: 38 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM 97
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQVLKGLFY 168
+ P++V+ + P+ + ++ + M G L YV + + + ++ Q+ KG+ Y
Sbjct: 98 DHPHLVRLLGVCLSPT--IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMY 155
Query: 169 MHSRNIVHRDIKPANVLI---NEKMEHPCGYSCLYESGEARHRKHGG------------- 212
+ R +VHRD+ NVL+ N G + L E E + GG
Sbjct: 156 LEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 215
Query: 213 YNGFA--ADIWSFGVTMMELY-MGYYPF--LEPGQEPDFLSLMLAICFREPPSLPECSSE 267
Y F +D+WS+GVT+ EL G P+ + + PD L + P P C+ +
Sbjct: 216 YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERL-----PQPPICTID 270
Query: 268 KFRDFIRCCLQKGD 281
+ ++C + D
Sbjct: 271 VYMVMVKCWMIDAD 284
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 40 NLVHTEAASYGQEIDGL-SQLEKLQVLGQGNGGTVFK-VRHKQTLALYALKVMQCDR--- 94
N +H + G+E + L SQ + +LG G G+V+ +R L + A+K ++ DR
Sbjct: 38 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV-AIKHVEKDRISD 96
Query: 95 -GTPPN----PQELNILRQTNSPY--IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSR 147
G PN P E+ +L++ +S + +++ F +P V IL L ++ R
Sbjct: 97 WGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER 156
Query: 148 GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLIN------EKMEHPCGY---SC 198
G L E++ + QVL+ + + H+ ++HRDIK N+LI+ + ++ G
Sbjct: 157 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 216
Query: 199 LYESGEARHR-------KHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLML 251
+Y + ++ Y+G +A +WS G+ + ++ G PF E D +
Sbjct: 217 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRG 271
Query: 252 AICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
+ FR+ S EC + IR CL PS R T ++ +HP++ D
Sbjct: 272 QVFFRQRVSX-EC-----QHLIRWCLAL-RPSDRPTFEEIQNHPWMQDV 313
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 40 NLVHTEAASYGQEIDGL-SQLEKLQVLGQGNGGTVFK-VRHKQTLALYALKVMQCDR--- 94
N +H + G+E + L SQ + +LG G G+V+ +R L + A+K ++ DR
Sbjct: 19 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV-AIKHVEKDRISD 77
Query: 95 -GTPPN----PQELNILRQTNSPY--IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSR 147
G PN P E+ +L++ +S + +++ F +P V IL L ++ R
Sbjct: 78 WGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER 137
Query: 148 GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLIN------EKMEHPCGY---SC 198
G L E++ + QVL+ + + H+ ++HRDIK N+LI+ + ++ G
Sbjct: 138 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 197
Query: 199 LYESGEARHR-------KHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLML 251
+Y + ++ Y+G +A +WS G+ + ++ G PF E D +
Sbjct: 198 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIGG 252
Query: 252 AICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
+ FR+ S EC + IR CL PS R T ++ +HP++ D
Sbjct: 253 QVFFRQRVS-SEC-----QHLIRWCLAL-RPSDRPTFEEIQNHPWMQDV 294
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 22/200 (11%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIV 115
+ +L+ LQ +G+G G V ++ A+K ++ D E +++ Q +V
Sbjct: 11 MKELKLLQTIGKGEFGDVMLGDYRGNKV--AVKCIKNDATAQAFLAEASVMTQLRHSNLV 68
Query: 116 KCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR--LSEDIICTISRQVLKGLFYMHSRN 173
+ + + G + I+ EYM GSL Y++SRGR L D + S V + + Y+ N
Sbjct: 69 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN 128
Query: 174 IVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGY-------------NGFA--A 218
VHRD+ NVL++E ++ S + EA + G F+ +
Sbjct: 129 FVHRDLAARNVLVSE--DNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREAAFSTKS 186
Query: 219 DIWSFGVTMMELY-MGYYPF 237
D+WSFG+ + E+Y G P+
Sbjct: 187 DVWSFGILLWEIYSFGRVPY 206
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 110/260 (42%), Gaps = 33/260 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQIFTKP 124
+G G+ + HK T +A+K++ + P E+ +LR P I+ ++
Sbjct: 30 IGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEI-LLRYGQHPNIITLKDVYDD- 87
Query: 125 SGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANV 184
V ++ E G L + + SE + + K + Y+H++ +VHRD+KP+N+
Sbjct: 88 GKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNI 147
Query: 185 LI------------------------NEKMEHPCGYSCLYESGEARHRKHGGYNGFAADI 220
L N + PC Y+ + + E R+ GY+ A DI
Sbjct: 148 LYVDESGNPESIRICDFGFAKQLRAENGLLXTPC-YTANFVAPEVLERQ--GYDA-ACDI 203
Query: 221 WSFGVTMMELYMGYYPFLE-PGQEP-DFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQ 278
WS GV + GY PF P P + L+ + + F S+ +D + L
Sbjct: 204 WSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKXLH 263
Query: 279 KGDPSKRWTASQLLSHPFLA 298
DP +R TA+ +L HP++
Sbjct: 264 V-DPHQRLTAALVLRHPWIV 282
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 40 NLVHTEAASYGQEIDGL-SQLEKLQVLGQGNGGTVFK-VRHKQTLALYALKVMQCDR--- 94
N +H + G+E + L SQ + +LG G G+V+ +R L + A+K ++ DR
Sbjct: 18 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV-AIKHVEKDRISD 76
Query: 95 -GTPPN----PQELNILRQTNSPY--IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSR 147
G PN P E+ +L++ +S + +++ F +P V IL L ++ R
Sbjct: 77 WGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER 136
Query: 148 GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLIN------EKMEHPCGY---SC 198
G L E++ + QVL+ + + H+ ++HRDIK N+LI+ + ++ G
Sbjct: 137 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 196
Query: 199 LYESGEARHR-------KHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLML 251
+Y + ++ Y+G +A +WS G+ + ++ G PF E D +
Sbjct: 197 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIGG 251
Query: 252 AICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
+ FR+ S EC + IR CL PS R T ++ +HP++ D
Sbjct: 252 QVFFRQRVS-SEC-----QHLIRWCLAL-RPSDRPTFEEIQNHPWMQDV 293
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 40 NLVHTEAASYGQEIDGL-SQLEKLQVLGQGNGGTVFK-VRHKQTLALYALKVMQCDR--- 94
N +H + G+E + L SQ + +LG G G+V+ +R L + A+K ++ DR
Sbjct: 19 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV-AIKHVEKDRISD 77
Query: 95 -GTPPN----PQELNILRQTNSPY--IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSR 147
G PN P E+ +L++ +S + +++ F +P V IL L ++ R
Sbjct: 78 WGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER 137
Query: 148 GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLIN------EKMEHPCGY---SC 198
G L E++ + QVL+ + + H+ ++HRDIK N+LI+ + ++ G
Sbjct: 138 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 197
Query: 199 LYESGEARHR-------KHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLML 251
+Y + ++ Y+G +A +WS G+ + ++ G PF E D +
Sbjct: 198 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIGG 252
Query: 252 AICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
+ FR+ S EC + IR CL PS R T ++ +HP++ D
Sbjct: 253 QVFFRQRVSX-EC-----QHLIRWCLAL-RPSDRPTFEEIQNHPWMQDV 294
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 35/210 (16%)
Query: 61 KLQVLGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNPQ------------ELNI 105
K++ LG G G V + K + A+KV+ Q D+G + E+++
Sbjct: 40 KVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISL 99
Query: 106 LRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKG 165
L+ + P I+K +F + ++ E+ + G L + +R + E I +Q+L G
Sbjct: 100 LKSLDHPNIIKLFDVF-EDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSG 158
Query: 166 LFYMHSRNIVHRDIKPANVLINEKMEH------PCGYSCLYESGEARHRKHGGYNGFAA- 218
+ Y+H NIVHRDIKP N+L+ K G S + S + + R G + A
Sbjct: 159 ICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF-SKDYKLRDRLGTAYYIAP 217
Query: 219 -----------DIWSFGVTMMELYMGYYPF 237
D+WS GV M L GY PF
Sbjct: 218 EVLKKKYNEKCDVWSCGVIMYILLCGYPPF 247
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 40 NLVHTEAASYGQEIDGL-SQLEKLQVLGQGNGGTVFK-VRHKQTLALYALKVMQCDR--- 94
N +H + G+E + L SQ + +LG G G+V+ +R L + A+K ++ DR
Sbjct: 19 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV-AIKHVEKDRISD 77
Query: 95 -GTPPN----PQELNILRQTNSPY--IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSR 147
G PN P E+ +L++ +S + +++ F +P V IL L ++ R
Sbjct: 78 WGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER 137
Query: 148 GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLIN------EKMEHPCGY---SC 198
G L E++ + QVL+ + + H+ ++HRDIK N+LI+ + ++ G
Sbjct: 138 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 197
Query: 199 LYESGEARHR-------KHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLML 251
+Y + ++ Y+G +A +WS G+ + ++ G PF E D +
Sbjct: 198 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIGG 252
Query: 252 AICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
+ FR+ S EC + IR CL PS R T ++ +HP++ D
Sbjct: 253 QVFFRQRVS-SEC-----QHLIRWCLAL-RPSDRPTFEEIQNHPWMQDV 294
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 117/254 (46%), Gaps = 36/254 (14%)
Query: 57 SQLEKLQVLGQGNGGTVFK---VRHKQTLAL-YALKVMQCDRGTPPNPQELN---ILRQT 109
++L++++VLG G GTV+K V +T+ + A+K++ G N + ++ I+
Sbjct: 15 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM 74
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQVLKGLFY 168
+ P++V+ + P+ + ++ + M G L YV + + + ++ Q+ KG+ Y
Sbjct: 75 DHPHLVRLLGVCLSPT--IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMY 132
Query: 169 MHSRNIVHRDIKPANVLI---NEKMEHPCGYSCLYESGEARHRKHGG------------- 212
+ R +VHRD+ NVL+ N G + L E E + GG
Sbjct: 133 LEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 192
Query: 213 YNGFA--ADIWSFGVTMMELY-MGYYPF--LEPGQEPDFLSLMLAICFREPPSLPECSSE 267
Y F +D+WS+GVT+ EL G P+ + + PD L + P P C+ +
Sbjct: 193 YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERL-----PQPPICTID 247
Query: 268 KFRDFIRCCLQKGD 281
+ ++C + D
Sbjct: 248 VYMVMVKCWMIDAD 261
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 111/258 (43%), Gaps = 29/258 (11%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQ----CDRGTPPNPQ-ELNILRQTNSPYIVKC 117
+LG+G+ V++ T A+K++ G Q E+ I Q P I++
Sbjct: 17 NLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILEL 76
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR-LSEDIICTISRQVLKGLFYMHSRNIVH 176
+ F + S V +++E G + Y+K+R + SE+ Q++ G+ Y+HS I+H
Sbjct: 77 YNYF-EDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILH 135
Query: 177 RDIKPANVLINEKMEHPCGYSCLYESGEARHRKH----------------GGYNGFAADI 220
RD+ +N+L+ M L + H KH +G +D+
Sbjct: 136 RDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDV 195
Query: 221 WSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKG 280
WS G L +G PF + D + L +P S + +D I L++
Sbjct: 196 WSLGCMFYTLLIGRPPF-----DTDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQLLRR- 249
Query: 281 DPSKRWTASQLLSHPFLA 298
+P+ R + S +L HPF++
Sbjct: 250 NPADRLSLSSVLDHPFMS 267
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 40 NLVHTEAASYGQEIDGL-SQLEKLQVLGQGNGGTVFK-VRHKQTLALYALKVMQCDR--- 94
N +H + G+E + L SQ + +LG G G+V+ +R L + A+K ++ DR
Sbjct: 18 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV-AIKHVEKDRISD 76
Query: 95 -GTPPN----PQELNILRQTNSPY--IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSR 147
G PN P E+ +L++ +S + +++ F +P V IL L ++ R
Sbjct: 77 WGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER 136
Query: 148 GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLIN------EKMEHPCGY---SC 198
G L E++ + QVL+ + + H+ ++HRDIK N+LI+ + ++ G
Sbjct: 137 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 196
Query: 199 LYESGEARHR-------KHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLML 251
+Y + ++ Y+G +A +WS G+ + ++ G PF E D +
Sbjct: 197 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIGG 251
Query: 252 AICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
+ FR+ S EC + IR CL PS R T ++ +HP++ D
Sbjct: 252 QVFFRQRVS-SEC-----QHLIRWCLAL-RPSDRPTFEEIQNHPWMQDV 293
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 40 NLVHTEAASYGQEIDGL-SQLEKLQVLGQGNGGTVFK-VRHKQTLALYALKVMQCDR--- 94
N +H + G+E + L SQ + +LG G G+V+ +R L + A+K ++ DR
Sbjct: 19 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV-AIKHVEKDRISD 77
Query: 95 -GTPPN----PQELNILRQTNSPY--IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSR 147
G PN P E+ +L++ +S + +++ F +P V IL L ++ R
Sbjct: 78 WGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER 137
Query: 148 GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLIN------EKMEHPCGY---SC 198
G L E++ + QVL+ + + H+ ++HRDIK N+LI+ + ++ G
Sbjct: 138 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 197
Query: 199 LYESGEARHR-------KHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLML 251
+Y + ++ Y+G +A +WS G+ + ++ G PF E D +
Sbjct: 198 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIGG 252
Query: 252 AICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
+ FR+ S EC + IR CL PS R T ++ +HP++ D
Sbjct: 253 QVFFRQRVSX-EC-----QHLIRWCLAL-RPSDRPTFEEIQNHPWMQDV 294
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 22/200 (11%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIV 115
+ +L+ LQ +G+G G V ++ A+K ++ D E +++ Q +V
Sbjct: 20 MKELKLLQTIGKGEFGDVMLGDYRGNKV--AVKCIKNDATAQAFLAEASVMTQLRHSNLV 77
Query: 116 KCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR--LSEDIICTISRQVLKGLFYMHSRN 173
+ + + G + I+ EYM GSL Y++SRGR L D + S V + + Y+ N
Sbjct: 78 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN 137
Query: 174 IVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGY-------------NGFA--A 218
VHRD+ NVL++E ++ S + EA + G F+ +
Sbjct: 138 FVHRDLAARNVLVSE--DNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKS 195
Query: 219 DIWSFGVTMMELY-MGYYPF 237
D+WSFG+ + E+Y G P+
Sbjct: 196 DVWSFGILLWEIYSFGRVPY 215
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 40 NLVHTEAASYGQEIDGL-SQLEKLQVLGQGNGGTVFK-VRHKQTLALYALKVMQCDR--- 94
N +H + G+E + L SQ + +LG G G+V+ +R L + A+K ++ DR
Sbjct: 18 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV-AIKHVEKDRISD 76
Query: 95 -GTPPN----PQELNILRQTNSPY--IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSR 147
G PN P E+ +L++ +S + +++ F +P V IL L ++ R
Sbjct: 77 WGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER 136
Query: 148 GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLIN------EKMEHPCGY---SC 198
G L E++ + QVL+ + + H+ ++HRDIK N+LI+ + ++ G
Sbjct: 137 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 196
Query: 199 LYESGEARHR-------KHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLML 251
+Y + ++ Y+G +A +WS G+ + ++ G PF E D +
Sbjct: 197 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIGG 251
Query: 252 AICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
+ FR+ S EC + IR CL PS R T ++ +HP++ D
Sbjct: 252 QVFFRQRVSX-EC-----QHLIRWCLAL-RPSDRPTFEEIQNHPWMQDV 293
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 108/245 (44%), Gaps = 36/245 (14%)
Query: 26 LVTQLNIPKPVSCPNLVHTEAASYGQEIDGLSQL-------EKLQVLGQGNGGTVFKVRH 78
LV L+ P N + + Y I+ + L E ++V+G+G G V VRH
Sbjct: 37 LVYDLDFPALRKNKN-IDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRH 95
Query: 79 KQTLALYALKVMQCDRGTPPNP-----QELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133
K T +YA+K++ + +E +I+ NSP++V+ F + + ++ME
Sbjct: 96 KSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF-QDDRYLYMVME 154
Query: 134 YMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINE----- 188
YM G L + + S + E + +V+ L +HS +HRD+KP N+L+++
Sbjct: 155 YMPGGDL-VNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLK 213
Query: 189 --------KMEHPCGYSC-------LYESGEARHRKHG-GYNGFAADIWSFGVTMMELYM 232
KM C Y S E + G GY G D WS GV + E+ +
Sbjct: 214 LADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV 273
Query: 233 GYYPF 237
G PF
Sbjct: 274 GDTPF 278
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 108/245 (44%), Gaps = 36/245 (14%)
Query: 26 LVTQLNIPKPVSCPNLVHTEAASYGQEIDGLSQL-------EKLQVLGQGNGGTVFKVRH 78
LV L+ P N + + Y I+ + L E ++V+G+G G V VRH
Sbjct: 32 LVYDLDFPALRKNKN-IDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRH 90
Query: 79 KQTLALYALKVMQCDRGTPPNP-----QELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133
K T +YA+K++ + +E +I+ NSP++V+ F + + ++ME
Sbjct: 91 KSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF-QDDRYLYMVME 149
Query: 134 YMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINE----- 188
YM G L + + S + E + +V+ L +HS +HRD+KP N+L+++
Sbjct: 150 YMPGGDL-VNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLK 208
Query: 189 --------KMEHPCGYSC-------LYESGEARHRKHG-GYNGFAADIWSFGVTMMELYM 232
KM C Y S E + G GY G D WS GV + E+ +
Sbjct: 209 LADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV 268
Query: 233 GYYPF 237
G PF
Sbjct: 269 GDTPF 273
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 22/200 (11%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIV 115
+ +L+ LQ +G+G G V ++ A+K ++ D E +++ Q +V
Sbjct: 5 MKELKLLQTIGKGEFGDVMLGDYRGNKV--AVKCIKNDATAQAFLAEASVMTQLRHSNLV 62
Query: 116 KCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR--LSEDIICTISRQVLKGLFYMHSRN 173
+ + + G + I+ EYM GSL Y++SRGR L D + S V + + Y+ N
Sbjct: 63 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN 122
Query: 174 IVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGY-------------NGFA--A 218
VHRD+ NVL++E ++ S + EA + G F+ +
Sbjct: 123 FVHRDLAARNVLVSE--DNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKS 180
Query: 219 DIWSFGVTMMELY-MGYYPF 237
D+WSFG+ + E+Y G P+
Sbjct: 181 DVWSFGILLWEIYSFGRVPY 200
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 108/245 (44%), Gaps = 36/245 (14%)
Query: 26 LVTQLNIPKPVSCPNLVHTEAASYGQEIDGLSQL-------EKLQVLGQGNGGTVFKVRH 78
LV L+ P N + + Y I+ + L E ++V+G+G G V VRH
Sbjct: 37 LVYDLDFPALRKNKN-IDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRH 95
Query: 79 KQTLALYALKVMQCDRGTPPNP-----QELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133
K T +YA+K++ + +E +I+ NSP++V+ F + + ++ME
Sbjct: 96 KSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF-QDDRYLYMVME 154
Query: 134 YMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINE----- 188
YM G L + + S + E + +V+ L +HS +HRD+KP N+L+++
Sbjct: 155 YMPGGDL-VNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLK 213
Query: 189 --------KMEHPCGYSC-------LYESGEARHRKHG-GYNGFAADIWSFGVTMMELYM 232
KM C Y S E + G GY G D WS GV + E+ +
Sbjct: 214 LADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV 273
Query: 233 GYYPF 237
G PF
Sbjct: 274 GDTPF 278
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 125/293 (42%), Gaps = 55/293 (18%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQ--TLALYALKVMQCDRGTPPNP-QELNILRQTNSP 112
+ + +KL+ +G+G G V+K + Q +AL +++ D G P +E+++L++ + P
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHP 79
Query: 113 YIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSR 172
IV + ++++ E+M+ ++ +++ L + I Q+L+G+ + H
Sbjct: 80 NIVSLIDVIHSERC-LTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH 138
Query: 173 NIVHRDIKPANVLINEKMEHPCGYSCLYESGEAR-----------------HRKHGGYNG 215
I+HRD+KP N+LIN G L + G AR +R G
Sbjct: 139 RILHRDLKPQNLLINSD-----GALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMG 193
Query: 216 -----FAADIWSFGVTMMELYMGYYPF---LEPGQEPDFLSLMLAICFREPPSLPECSSE 267
+ DIWS G E+ G F + Q P S++ RE P + E
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLW 253
Query: 268 KFRDF-----------IRCCLQKG----------DPSKRWTASQLLSHPFLAD 299
K R F I Q+G DP+KR +A ++HP+ D
Sbjct: 254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 125/293 (42%), Gaps = 55/293 (18%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQ--TLALYALKVMQCDRGTPPNP-QELNILRQTNSP 112
+ + +KL+ +G+G G V+K + Q +AL +++ D G P +E+++L++ + P
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHP 79
Query: 113 YIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSR 172
IV + ++++ E+M+ ++ +++ L + I Q+L+G+ + H
Sbjct: 80 NIVSLIDVIHSERC-LTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH 138
Query: 173 NIVHRDIKPANVLINEKMEHPCGYSCLYESGEAR-----------------HRKHGGYNG 215
I+HRD+KP N+LIN G L + G AR +R G
Sbjct: 139 RILHRDLKPQNLLINSD-----GALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMG 193
Query: 216 -----FAADIWSFGVTMMELYMGYYPF---LEPGQEPDFLSLMLAICFREPPSLPECSSE 267
+ DIWS G E+ G F + Q P S++ RE P + E
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLW 253
Query: 268 KFRDF-----------IRCCLQKG----------DPSKRWTASQLLSHPFLAD 299
K R F I Q+G DP+KR +A ++HP+ D
Sbjct: 254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 125/271 (46%), Gaps = 40/271 (14%)
Query: 57 SQLEKLQVLGQGNGGTVFK-VRHKQTLALYALKVMQCDR----GTPPN----PQELNILR 107
SQ + +LG G G+V+ +R L + A+K ++ DR G PN P E+ +L+
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPV-AIKHVEKDRISDWGELPNGTRVPMEVVLLK 62
Query: 108 QTNSPY--IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKG 165
+ +S + +++ F +P V IL L ++ RG L E++ + QVL+
Sbjct: 63 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEA 122
Query: 166 LFYMHSRNIVHRDIKPANVLIN------EKMEHPCGY---SCLYESGEARHR-------K 209
+ + H+ ++HRDIK N+LI+ + ++ G +Y + +
Sbjct: 123 VRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIR 182
Query: 210 HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
+ Y+G +A +WS G+ + ++ G PF E D + + FR+ S EC
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVFFRQRVSX-ECQH--- 233
Query: 270 RDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
IR CL PS R T ++ +HP++ D
Sbjct: 234 --LIRWCLAL-RPSDRPTFEEIQNHPWMQDV 261
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 114/256 (44%), Gaps = 29/256 (11%)
Query: 63 QVLGQGNGGTV-----FKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKC 117
+ LG+G+ G V +K + K L + ++++ +E++ L+ P+I+K
Sbjct: 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKL 74
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ + T P+ ++ +++EY G L Y+ + R++ED +Q++ + Y H IVHR
Sbjct: 75 YDVITTPT-DIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHR 132
Query: 178 DIKPANVLINEKMEHPC---GYSCLYESGEARHRKHGG-------------YNGFAADIW 221
D+KP N+L+++ + G S + G G Y G D+W
Sbjct: 133 DLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVW 192
Query: 222 SFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGD 281
S G+ + + +G PF + +F+ + +P+ S + IR + D
Sbjct: 193 SCGIVLYVMLVGRLPF-----DDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRMIV-AD 246
Query: 282 PSKRWTASQLLSHPFL 297
P +R T ++ P+
Sbjct: 247 PMQRITIQEIRRDPWF 262
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 110/234 (47%), Gaps = 37/234 (15%)
Query: 58 QLEKLQVLGQGNGGTVFKVRHK----QTLALYALKVMQCDRGTPPNPQ-----ELNILRQ 108
L+ + LG+GN G+V R+ T AL A+K +Q + P+ Q E+ IL+
Sbjct: 12 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQ---HSGPDQQRDFQREIQILKA 68
Query: 109 TNSPYIVKCHQIFTKPSGE-VSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQVLKGL 166
+S +IVK + P + + ++MEY+ +G L ++ + R RL + S Q+ KG+
Sbjct: 69 LHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGM 128
Query: 167 FYMHSRNIVHRDIKPANVLINEKMEHPCG-------------YSCLYESGEARHRKHG-- 211
Y+ SR VHRD+ N+L+ + Y + E G++ +
Sbjct: 129 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE 188
Query: 212 --GYNGFA--ADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL 261
N F+ +D+WSFGV + EL+ P E FL +M C R+ P+L
Sbjct: 189 SLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE--FLRMM--GCERDVPAL 238
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 125/299 (41%), Gaps = 60/299 (20%)
Query: 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCD--RGTPPNP-QELNILRQTNSPY 113
SQ ++L+ LG G TV+K +K T ALK ++ D GTP +E++++++
Sbjct: 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHEN 64
Query: 114 IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR------LSEDIICTISRQVLKGLF 167
IV+ + + +++++ E+MD L+ Y+ SR L +++ Q+L+GL
Sbjct: 65 IVRLYDVI-HTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLA 122
Query: 168 YMHSRNIVHRDIKPANVLINEKMEHPCGYSCLY------------ESGEARHRKHGGYNG 215
+ H I+HRD+KP N+LIN++ + G L E +R G
Sbjct: 123 FCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMG 182
Query: 216 -----FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICF--------------- 255
+ DIWS G + E+ G P + + L L+ I
Sbjct: 183 SRTYSTSIDIWSCGCILAEMITG-KPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPK 241
Query: 256 -------REP--------PSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299
R P P E DF+ LQ +P R +A Q L HP+ A+
Sbjct: 242 YNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQL-NPDMRLSAKQALHHPWFAE 299
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 126/271 (46%), Gaps = 40/271 (14%)
Query: 57 SQLEKLQVLGQGNGGTVFK-VRHKQTLALYALKVMQCDR----GTPPN----PQELNILR 107
SQ + +LG G G+V+ +R L + A+K ++ DR G PN P E+ +L+
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPV-AIKHVEKDRISDWGELPNGTRVPMEVVLLK 66
Query: 108 QTNSPY--IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKG 165
+ +S + +++ F +P V IL L ++ RG L E++ + QVL+
Sbjct: 67 KVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEA 126
Query: 166 LFYMHSRNIVHRDIKPANVLIN------EKMEHPCGY---SCLYESGEARHR-------K 209
+ + H+ ++HRDIK N+LI+ + ++ G +Y + +
Sbjct: 127 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIR 186
Query: 210 HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
+ Y+G +A +WS G+ + ++ G PF E D + + FR+ S EC
Sbjct: 187 YHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVFFRQRVS-SEC----- 235
Query: 270 RDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
+ IR CL PS R T ++ +HP++ D
Sbjct: 236 QHLIRWCLAL-RPSDRPTFEEIQNHPWMQDV 265
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 110/234 (47%), Gaps = 37/234 (15%)
Query: 58 QLEKLQVLGQGNGGTVFKVRHK----QTLALYALKVMQCDRGTPPNPQ-----ELNILRQ 108
L+ + LG+GN G+V R+ T AL A+K +Q + P+ Q E+ IL+
Sbjct: 24 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQ---HSGPDQQRDFQREIQILKA 80
Query: 109 TNSPYIVKCHQIFTKPSGE-VSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQVLKGL 166
+S +IVK + P + + ++MEY+ +G L ++ + R RL + S Q+ KG+
Sbjct: 81 LHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGM 140
Query: 167 FYMHSRNIVHRDIKPANVLINEKMEHPCG-------------YSCLYESGEARHRKHG-- 211
Y+ SR VHRD+ N+L+ + Y + E G++ +
Sbjct: 141 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE 200
Query: 212 --GYNGFA--ADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL 261
N F+ +D+WSFGV + EL+ P E FL +M C R+ P+L
Sbjct: 201 SLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE--FLRMM--GCERDVPAL 250
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 115/257 (44%), Gaps = 34/257 (13%)
Query: 13 PASIASSVRKPRHLVTQLNIPKPVSCPNLVH--TEAASYGQEIDGL----SQLEKLQVLG 66
P ++ S + LV L+ P N+ + ++I GL + ++V+G
Sbjct: 25 PINVESLLDGLNSLVLDLDFPALRKNKNIDNFLNRYEKIVKKIRGLQMKAEDYDVVKVIG 84
Query: 67 QGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELNILRQTNSPYIVKCHQIF 121
+G G V VRHK + +YA+K++ + +E +I+ NSP++V+ F
Sbjct: 85 RGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAF 144
Query: 122 TKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKP 181
+ + ++MEYM G L + + S + E + +V+ L +HS ++HRD+KP
Sbjct: 145 -QDDKYLYMVMEYMPGGDL-VNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKP 202
Query: 182 ANVLINE-------------KMEHPCGYSC-------LYESGEARHRKHG-GYNGFAADI 220
N+L+++ KM+ C Y S E + G GY G D
Sbjct: 203 DNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDW 262
Query: 221 WSFGVTMMELYMGYYPF 237
WS GV + E+ +G PF
Sbjct: 263 WSVGVFLFEMLVGDTPF 279
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 134/289 (46%), Gaps = 41/289 (14%)
Query: 40 NLVHTEAASYGQEIDGL-SQLEKLQVLGQGNGGTVFK-VRHKQTLALYALKVMQCDR--- 94
N +H + G+E + L SQ + +LG G G+V+ +R L + A+K ++ DR
Sbjct: 6 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV-AIKHVEKDRISD 64
Query: 95 -GTPPN----PQELNILRQTNSPY--IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSR 147
G PN P E+ +L++ +S + +++ F +P V IL L ++ R
Sbjct: 65 WGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER 124
Query: 148 GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLIN------EKMEHPCGY---SC 198
G L E++ + QVL+ + + H+ ++HRDIK N+LI+ + ++ G
Sbjct: 125 GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 184
Query: 199 LYESGEARHR-------KHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLML 251
+Y + ++ Y+G +A +WS G+ + ++ G PF E D +
Sbjct: 185 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRG 239
Query: 252 AICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
+ FR+ S EC + IR CL P R T ++ +HP++ D
Sbjct: 240 QVFFRQRVSX-EC-----QHLIRWCLAL-RPXDRPTFEEIQNHPWMQDV 281
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 121/290 (41%), Gaps = 55/290 (18%)
Query: 60 EKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-------QELNILRQTNSP 112
EKL LG+G TV+K R K T + A+K ++ + +E+ +L++ + P
Sbjct: 13 EKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHP 72
Query: 113 YIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR-LSEDIICTISRQVLKGLFYMHS 171
I+ F S +S++ ++M+ LE+ +K L+ I L+GL Y+H
Sbjct: 73 NIIGLLDAFGHKSN-ISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ 130
Query: 172 RNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKH-----------------GGYN 214
I+HRD+KP N+L++E L +S + +R +
Sbjct: 131 HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMY 190
Query: 215 GFAADIWSFGVTMMELYMGYYPFLEPG--------------------QEPDFLSLMLAIC 254
G D+W+ G + EL + PFL PG Q PD SL +
Sbjct: 191 GVGVDMWAVGCILAELLL-RVPFL-PGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVT 248
Query: 255 FREPPSLP-----ECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299
F+ P +P + + D I+ L +P R TA+Q L + ++
Sbjct: 249 FKSFPGIPLHHIFSAAGDDLLDLIQ-GLFLFNPCARITATQALKMKYFSN 297
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 91/206 (44%), Gaps = 24/206 (11%)
Query: 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELNILRQT 109
E L+ +G+G+ G V V+ T +YA+K M + N +EL I++
Sbjct: 13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL 72
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
P++V F + ++ ++++ + G L +++ E+ + +++ L Y+
Sbjct: 73 EHPFLVNLWYSF-QDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYL 131
Query: 170 HSRNIVHRDIKPANVLINEKME-HPCGYSCL-----------------YESGEARHRKHG 211
++ I+HRD+KP N+L++E H ++ Y + E + G
Sbjct: 132 QNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKG 191
Query: 212 GYNGFAADIWSFGVTMMELYMGYYPF 237
FA D WS GVT EL G P+
Sbjct: 192 AGYSFAVDWWSLGVTAYELLRGRRPY 217
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 103/252 (40%), Gaps = 26/252 (10%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELNILRQTNSPYIVKCHQ 119
LG+G G V+ R KQ + ALKV+ Q ++ + +E+ I P I++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 120 IFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDI 179
F + +++E+ G L ++ GR E T ++ L Y H R ++HRDI
Sbjct: 82 YFHD-RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDI 140
Query: 180 KPANVLINEKMEHPC---GYSCLYESGEAR-----------HRKHGGYNGFAADIWSFGV 225
KP N+L+ K E G+S S R G + D+W GV
Sbjct: 141 KPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGV 200
Query: 226 TMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKR 285
E +G PF P + + + + PP L + S + +R P +R
Sbjct: 201 LCYEFLVGMPPFDSPSHTETHRRI-VNVDLKFPPFLSDGSKDLISKLLRY-----HPPQR 254
Query: 286 WTASQLLSHPFL 297
++ HP++
Sbjct: 255 LPLKGVMEHPWV 266
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 107/261 (40%), Gaps = 26/261 (9%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELNILRQTN 110
+ + ++ LG+G G V+ R KQ + ALKV+ Q ++ + +E+ I
Sbjct: 13 IDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 111 SPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMH 170
P I++ + F + +++E+ G L ++ GR E T ++ L Y H
Sbjct: 73 HPNILRMYNYFHD-RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCH 131
Query: 171 SRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEAR-----------HRKHGGYNGF 216
R ++HRDIKP N+L+ K E G+S S R G +
Sbjct: 132 ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDE 191
Query: 217 AADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276
D+W GV E +G PF P + + + + PP L + S + +R
Sbjct: 192 KVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRI-VNVDLKFPPFLSDGSKDLISKLLRY- 249
Query: 277 LQKGDPSKRWTASQLLSHPFL 297
P +R ++ HP++
Sbjct: 250 ----HPPQRLPLKGVMEHPWV 266
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 103/252 (40%), Gaps = 26/252 (10%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELNILRQTNSPYIVKCHQ 119
LG+G G V+ R KQ + ALKV+ Q ++ + +E+ I P I++ +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 120 IFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDI 179
F + +++E+ G L ++ GR E T ++ L Y H R ++HRDI
Sbjct: 83 YFHD-RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDI 141
Query: 180 KPANVLINEKMEHPC---GYSCLYESGEAR-----------HRKHGGYNGFAADIWSFGV 225
KP N+L+ K E G+S S R G + D+W GV
Sbjct: 142 KPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGV 201
Query: 226 TMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKR 285
E +G PF P + + + + PP L + S + +R P +R
Sbjct: 202 LCYEFLVGMPPFDSPSHTETHRRI-VNVDLKFPPFLSDGSKDLISKLLRY-----HPPQR 255
Query: 286 WTASQLLSHPFL 297
++ HP++
Sbjct: 256 LPLKGVMEHPWV 267
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 89/208 (42%), Gaps = 34/208 (16%)
Query: 64 VLGQGNGGTVFKVRHKQTLALYALKV---MQCDRGTPPNPQELNILRQTNSPYIVKCHQI 120
+LGQG VF+ RHK+T L+A+KV + R +E +L++ N IVK I
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75
Query: 121 FTKPSGEVSIL-MEYMDAGSLEIYVKSRGR---LSEDIICTISRQVLKGLFYMHSRNIVH 176
+ + +L ME+ GSL ++ L E + R V+ G+ ++ IVH
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVH 135
Query: 177 RDIKPANVL--INE---------------KMEHPCGYSCLYESGEARH----------RK 209
R+IKP N++ I E ++E + LY + E H +
Sbjct: 136 RNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKD 195
Query: 210 HGGYNGFAADIWSFGVTMMELYMGYYPF 237
H G D+WS GVT G PF
Sbjct: 196 HQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 126/271 (46%), Gaps = 40/271 (14%)
Query: 57 SQLEKLQVLGQGNGGTVFK-VRHKQTLALYALKVMQCDR----GTPPN----PQELNILR 107
SQ + +LG G G+V+ +R L + A+K ++ DR G PN P E+ +L+
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPV-AIKHVEKDRISDWGELPNGTRVPMEVVLLK 67
Query: 108 QTNSPY--IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKG 165
+ +S + +++ F +P V IL L ++ RG L E++ + QVL+
Sbjct: 68 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEA 127
Query: 166 LFYMHSRNIVHRDIKPANVLIN------EKMEHPCGY---SCLYESGEARHR-------K 209
+ + H+ ++HRDIK N+LI+ + ++ G +Y + +
Sbjct: 128 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIR 187
Query: 210 HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
+ Y+G +A +WS G+ + ++ G PF E D + + FR+ S EC
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVFFRQRVS-SEC----- 236
Query: 270 RDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
+ IR CL PS R T ++ +HP++ D
Sbjct: 237 QHLIRWCLAL-RPSDRPTFEEIQNHPWMQDV 266
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 126/271 (46%), Gaps = 40/271 (14%)
Query: 57 SQLEKLQVLGQGNGGTVFK-VRHKQTLALYALKVMQCDR----GTPPN----PQELNILR 107
SQ + +LG G G+V+ +R L + A+K ++ DR G PN P E+ +L+
Sbjct: 31 SQYQVGPLLGSGGFGSVYSGIRVSDNLPV-AIKHVEKDRISDWGELPNGTRVPMEVVLLK 89
Query: 108 QTNSPY--IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKG 165
+ +S + +++ F +P V IL L ++ RG L E++ + QVL+
Sbjct: 90 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEA 149
Query: 166 LFYMHSRNIVHRDIKPANVLIN------EKMEHPCGY---SCLYESGEARHR-------K 209
+ + H+ ++HRDIK N+LI+ + ++ G +Y + +
Sbjct: 150 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIR 209
Query: 210 HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
+ Y+G +A +WS G+ + ++ G PF E D + + FR+ S EC
Sbjct: 210 YHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVFFRQRVSX-EC----- 258
Query: 270 RDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
+ IR CL PS R T ++ +HP++ D
Sbjct: 259 QHLIRWCLAL-RPSDRPTFEEIQNHPWMQDV 288
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 126/271 (46%), Gaps = 40/271 (14%)
Query: 57 SQLEKLQVLGQGNGGTVFK-VRHKQTLALYALKVMQCDR----GTPPN----PQELNILR 107
SQ + +LG G G+V+ +R L + A+K ++ DR G PN P E+ +L+
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPV-AIKHVEKDRISDWGELPNGTRVPMEVVLLK 66
Query: 108 QTNSPY--IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKG 165
+ +S + +++ F +P V IL L ++ RG L E++ + QVL+
Sbjct: 67 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEA 126
Query: 166 LFYMHSRNIVHRDIKPANVLIN------EKMEHPCGY---SCLYESGEARHR-------K 209
+ + H+ ++HRDIK N+LI+ + ++ G +Y + +
Sbjct: 127 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIR 186
Query: 210 HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
+ Y+G +A +WS G+ + ++ G PF E D + + FR+ S EC
Sbjct: 187 YHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVFFRQRVS-SEC----- 235
Query: 270 RDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
+ IR CL PS R T ++ +HP++ D
Sbjct: 236 QHLIRWCLAL-RPSDRPTFEEIQNHPWMQDV 265
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 125/271 (46%), Gaps = 40/271 (14%)
Query: 57 SQLEKLQVLGQGNGGTVFK-VRHKQTLALYALKVMQCDR----GTPPN----PQELNILR 107
SQ + +LG G G+V+ +R L + A+K ++ DR G PN P E+ +L+
Sbjct: 7 SQYQVGPLLGSGGFGSVYSGIRVSDNLPV-AIKHVEKDRISDWGELPNGTRVPMEVVLLK 65
Query: 108 QTNSPY--IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKG 165
+ +S + +++ F +P V IL L ++ RG L E++ + QVL+
Sbjct: 66 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEA 125
Query: 166 LFYMHSRNIVHRDIKPANVLIN------EKMEHPCGY---SCLYESGEARHR-------K 209
+ + H+ ++HRDIK N+LI+ + ++ G +Y + +
Sbjct: 126 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIR 185
Query: 210 HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
+ Y+G +A +WS G+ + ++ G PF E D + + FR+ S EC
Sbjct: 186 YHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVFFRQRVS-SECQH--- 236
Query: 270 RDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
IR CL PS R T ++ +HP++ D
Sbjct: 237 --LIRWCLAL-RPSDRPTFEEIQNHPWMQDV 264
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 126/271 (46%), Gaps = 40/271 (14%)
Query: 57 SQLEKLQVLGQGNGGTVFK-VRHKQTLALYALKVMQCDR----GTPPN----PQELNILR 107
SQ + +LG G G+V+ +R L + A+K ++ DR G PN P E+ +L+
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPV-AIKHVEKDRISDWGELPNGTRVPMEVVLLK 67
Query: 108 QTNSPY--IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKG 165
+ +S + +++ F +P V IL L ++ RG L E++ + QVL+
Sbjct: 68 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEA 127
Query: 166 LFYMHSRNIVHRDIKPANVLIN------EKMEHPCGY---SCLYESGEARHR-------K 209
+ + H+ ++HRDIK N+LI+ + ++ G +Y + +
Sbjct: 128 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIR 187
Query: 210 HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
+ Y+G +A +WS G+ + ++ G PF E D + + FR+ S EC
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVFFRQRVS-SEC----- 236
Query: 270 RDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
+ IR CL PS R T ++ +HP++ D
Sbjct: 237 QHLIRWCLAL-RPSDRPTFEEIQNHPWMQDV 266
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 126/271 (46%), Gaps = 40/271 (14%)
Query: 57 SQLEKLQVLGQGNGGTVFK-VRHKQTLALYALKVMQCDR----GTPPN----PQELNILR 107
SQ + +LG G G+V+ +R L + A+K ++ DR G PN P E+ +L+
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPV-AIKHVEKDRISDWGELPNGTRVPMEVVLLK 67
Query: 108 QTNSPY--IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKG 165
+ +S + +++ F +P V IL L ++ RG L E++ + QVL+
Sbjct: 68 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEA 127
Query: 166 LFYMHSRNIVHRDIKPANVLIN------EKMEHPCGY---SCLYESGEARHR-------K 209
+ + H+ ++HRDIK N+LI+ + ++ G +Y + +
Sbjct: 128 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIR 187
Query: 210 HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
+ Y+G +A +WS G+ + ++ G PF E D + + FR+ S EC
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVFFRQRVS-SEC----- 236
Query: 270 RDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
+ IR CL PS R T ++ +HP++ D
Sbjct: 237 QHLIRWCLAL-RPSDRPTFEEIQNHPWMQDV 266
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 89/209 (42%), Gaps = 34/209 (16%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKV---MQCDRGTPPNPQELNILRQTNSPYIVKCHQ 119
+LGQG VF+ RHK+T L+A+KV + R +E +L++ N IVK
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 120 IFTKPSGEVSIL-MEYMDAGSLEIYVKSRGR---LSEDIICTISRQVLKGLFYMHSRNIV 175
I + + +L ME+ GSL ++ L E + R V+ G+ ++ IV
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIV 134
Query: 176 HRDIKPANVL--INE---------------KMEHPCGYSCLYESGEARH----------R 208
HR+IKP N++ I E ++E + LY + E H +
Sbjct: 135 HRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERAVLRK 194
Query: 209 KHGGYNGFAADIWSFGVTMMELYMGYYPF 237
H G D+WS GVT G PF
Sbjct: 195 DHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 109/234 (46%), Gaps = 37/234 (15%)
Query: 58 QLEKLQVLGQGNGGTVFKVRHK----QTLALYALKVMQCDRGTPPNPQ-----ELNILRQ 108
L+ + LG+GN G+V R+ T AL A+K +Q + P+ Q E+ IL+
Sbjct: 8 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQ---HSGPDQQRDFQREIQILKA 64
Query: 109 TNSPYIVKCHQIFTKPSG-EVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQVLKGL 166
+S +IVK + P E+ ++MEY+ +G L ++ + R RL + S Q+ KG+
Sbjct: 65 LHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGM 124
Query: 167 FYMHSRNIVHRDIKPANVLINEKMEHPCG-------------YSCLYESGEARHRKHG-- 211
Y+ SR VHRD+ N+L+ + + E G++ +
Sbjct: 125 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPE 184
Query: 212 --GYNGFA--ADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL 261
N F+ +D+WSFGV + EL+ P E FL +M C R+ P+L
Sbjct: 185 SLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE--FLRMM--GCERDVPAL 234
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 125/271 (46%), Gaps = 40/271 (14%)
Query: 57 SQLEKLQVLGQGNGGTVFK-VRHKQTLALYALKVMQCDR----GTPPN----PQELNILR 107
SQ + +LG G G+V+ +R L + A+K ++ DR G PN P E+ +L+
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPV-AIKHVEKDRISDWGELPNGTRVPMEVVLLK 62
Query: 108 QTNSPY--IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKG 165
+ +S + +++ F +P V IL L ++ RG L E++ + QVL+
Sbjct: 63 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEA 122
Query: 166 LFYMHSRNIVHRDIKPANVLIN------EKMEHPCGY---SCLYESGEARHR-------K 209
+ + H+ ++HRDIK N+LI+ + ++ G +Y + +
Sbjct: 123 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIR 182
Query: 210 HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
+ Y+G +A +WS G+ + ++ G PF E D + + FR+ S EC
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVFFRQRVS-SECQH--- 233
Query: 270 RDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
IR CL PS R T ++ +HP++ D
Sbjct: 234 --LIRWCLAL-RPSDRPTFEEIQNHPWMQDV 261
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 127/318 (39%), Gaps = 56/318 (17%)
Query: 36 VSCPNLVHTEAASYGQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG 95
V+ NL +A S+ D + E ++ +G G G V R + T A+K +
Sbjct: 33 VAAKNLALLKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFD 92
Query: 96 TPPNPQ----ELNILRQTNSPYIVKCHQIF--TKPSGE---VSILMEYMDAGSLEIYVKS 146
N + EL IL+ I+ I T P GE V ++++ M++ +I + S
Sbjct: 93 VVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQI-IHS 151
Query: 147 RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYE---SG 203
L+ + + Q+L+GL YMHS ++HRD+KP+N+L+NE E G + +
Sbjct: 152 SQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTS 211
Query: 204 EARHR----KHGGYNGF--------------AADIWSFGVTMMELYMGYYPFLEPGQEPD 245
A H+ ++ + A D+WS G E+ F
Sbjct: 212 PAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQ 271
Query: 246 FLSLMLAICFREPPSLPECSSEKFRDFIRCC-------------------------LQKG 280
+M+ + P + +E+ R +I+ + +
Sbjct: 272 LQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRF 331
Query: 281 DPSKRWTASQLLSHPFLA 298
+PS R +A+ L HPFLA
Sbjct: 332 EPSARISAAAALRHPFLA 349
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 126/271 (46%), Gaps = 40/271 (14%)
Query: 57 SQLEKLQVLGQGNGGTVFK-VRHKQTLALYALKVMQCDR----GTPPN----PQELNILR 107
SQ + +LG G G+V+ +R L + A+K ++ DR G PN P E+ +L+
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPV-AIKHVEKDRISDWGELPNGTRVPMEVVLLK 62
Query: 108 QTNSPY--IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKG 165
+ +S + +++ F +P V IL L ++ RG L E++ + QVL+
Sbjct: 63 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEA 122
Query: 166 LFYMHSRNIVHRDIKPANVLIN------EKMEHPCGY---SCLYESGEARHR-------K 209
+ + H+ ++HRDIK N+LI+ + ++ G +Y + +
Sbjct: 123 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIR 182
Query: 210 HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
+ Y+G +A +WS G+ + ++ G PF E D + + FR+ S EC
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIGGQVFFRQRVS-SEC----- 231
Query: 270 RDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300
+ IR CL PS R T ++ +HP++ D
Sbjct: 232 QHLIRWCLAL-RPSDRPTFEEIQNHPWMQDV 261
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 111/258 (43%), Gaps = 27/258 (10%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELN----ILRQTNSPYIVKCHQI 120
LG+G V + HK T +A K++ + + + Q+L I R+ P IV+ H
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 96
Query: 121 FTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIK 180
+ S ++ + + G L + +R SE +Q+L+ + Y HS IVHR++K
Sbjct: 97 IQEESFHY-LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLK 155
Query: 181 PANVLINEKMEHPC------GYSCLYESGEARHRKHGGYNGFAA-------------DIW 221
P N+L+ K + G + EA H G G+ + DIW
Sbjct: 156 PENLLLASKAKGAAVKLADFGLAIEVNDSEAWH-GFAGTPGYLSPEVLKKDPYSKPVDIW 214
Query: 222 SFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGD 281
+ GV + L +GY PF + Q + + A + P + + + + I L +
Sbjct: 215 ACGVILYILLVGYPPFWDEDQHRLYAQIK-AGAYDYPSPEWDTVTPEAKSLIDSMLTV-N 272
Query: 282 PSKRWTASQLLSHPFLAD 299
P KR TA Q L P++ +
Sbjct: 273 PKKRITADQALKVPWICN 290
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 111/258 (43%), Gaps = 27/258 (10%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELN----ILRQTNSPYIVKCHQI 120
LG+G V + HK T +A K++ + + + Q+L I R+ P IV+ H
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 72
Query: 121 FTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIK 180
+ S ++ + + G L + +R SE +Q+L+ + Y HS IVHR++K
Sbjct: 73 IQEESFHY-LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLK 131
Query: 181 PANVLINEKMEHPC------GYSCLYESGEARHRKHGGYNGFAA-------------DIW 221
P N+L+ K + G + EA H G G+ + DIW
Sbjct: 132 PENLLLASKAKGAAVKLADFGLAIEVNDSEAWH-GFAGTPGYLSPEVLKKDPYSKPVDIW 190
Query: 222 SFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGD 281
+ GV + L +GY PF + Q + + A + P + + + + I L +
Sbjct: 191 ACGVILYILLVGYPPFWDEDQHRLYAQIK-AGAYDYPSPEWDTVTPEAKSLIDSMLTV-N 248
Query: 282 PSKRWTASQLLSHPFLAD 299
P KR TA Q L P++ +
Sbjct: 249 PKKRITADQALKVPWICN 266
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 111/258 (43%), Gaps = 27/258 (10%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELN----ILRQTNSPYIVKCHQI 120
LG+G V + HK T +A K++ + + + Q+L I R+ P IV+ H
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 121 FTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIK 180
+ S ++ + + G L + +R SE +Q+L+ + Y HS IVHR++K
Sbjct: 74 IQEESFHY-LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLK 132
Query: 181 PANVLINEKMEHPC------GYSCLYESGEARHRKHGGYNGFAA-------------DIW 221
P N+L+ K + G + EA H G G+ + DIW
Sbjct: 133 PENLLLASKAKGAAVKLADFGLAIEVNDSEAWH-GFAGTPGYLSPEVLKKDPYSKPVDIW 191
Query: 222 SFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGD 281
+ GV + L +GY PF + Q + + A + P + + + + I L +
Sbjct: 192 ACGVILYILLVGYPPFWDEDQHRLYAQIK-AGAYDYPSPEWDTVTPEAKSLIDSMLTV-N 249
Query: 282 PSKRWTASQLLSHPFLAD 299
P KR TA Q L P++ +
Sbjct: 250 PKKRITADQALKVPWICN 267
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 127/318 (39%), Gaps = 56/318 (17%)
Query: 36 VSCPNLVHTEAASYGQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG 95
V+ NL +A S+ D + E ++ +G G G V R + T A+K +
Sbjct: 34 VAAKNLALLKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFD 93
Query: 96 TPPNPQ----ELNILRQTNSPYIVKCHQIF--TKPSGE---VSILMEYMDAGSLEIYVKS 146
N + EL IL+ I+ I T P GE V ++++ M++ +I + S
Sbjct: 94 VVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQI-IHS 152
Query: 147 RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYE---SG 203
L+ + + Q+L+GL YMHS ++HRD+KP+N+L+NE E G + +
Sbjct: 153 SQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTS 212
Query: 204 EARHR----KHGGYNGF--------------AADIWSFGVTMMELYMGYYPFLEPGQEPD 245
A H+ ++ + A D+WS G E+ F
Sbjct: 213 PAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQ 272
Query: 246 FLSLMLAICFREPPSLPECSSEKFRDFIRCC-------------------------LQKG 280
+M+ + P + +E+ R +I+ + +
Sbjct: 273 LQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRF 332
Query: 281 DPSKRWTASQLLSHPFLA 298
+PS R +A+ L HPFLA
Sbjct: 333 EPSARISAAAALRHPFLA 350
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 111/258 (43%), Gaps = 27/258 (10%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELN----ILRQTNSPYIVKCHQI 120
LG+G V + HK T +A K++ + + + Q+L I R+ P IV+ H
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 121 FTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIK 180
+ S ++ + + G L + +R SE +Q+L+ + Y HS IVHR++K
Sbjct: 74 IQEESFHY-LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLK 132
Query: 181 PANVLINEKMEHPC------GYSCLYESGEARHRKHGGYNGFAA-------------DIW 221
P N+L+ K + G + EA H G G+ + DIW
Sbjct: 133 PENLLLASKAKGAAVKLADFGLAIEVNDSEAWH-GFAGTPGYLSPEVLKKDPYSKPVDIW 191
Query: 222 SFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGD 281
+ GV + L +GY PF + Q + + A + P + + + + I L +
Sbjct: 192 ACGVILYILLVGYPPFWDEDQHRLYAQIK-AGAYDYPSPEWDTVTPEAKSLIDSMLTV-N 249
Query: 282 PSKRWTASQLLSHPFLAD 299
P KR TA Q L P++ +
Sbjct: 250 PKKRITADQALKVPWICN 267
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 104/223 (46%), Gaps = 35/223 (15%)
Query: 58 QLEKLQVLGQGNGGTVFKVRHK----QTLALYALKVMQCDRGTPPNPQ-----ELNILRQ 108
L+ + LG+GN G+V R+ T AL A+K +Q + P+ Q E+ IL+
Sbjct: 11 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQ---HSGPDQQRDFQREIQILKA 67
Query: 109 TNSPYIVKCHQIFTKPSGE-VSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQVLKGL 166
+S +IVK + P + + ++MEY+ +G L ++ + R RL + S Q+ KG+
Sbjct: 68 LHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGM 127
Query: 167 FYMHSRNIVHRDIKPANVLINEKMEHPCG-------------YSCLYESGEARHRKHG-- 211
Y+ SR VHRD+ N+L+ + Y + E G++ +
Sbjct: 128 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE 187
Query: 212 --GYNGFA--ADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLM 250
N F+ +D+WSFGV + EL+ P E FL +M
Sbjct: 188 SLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE--FLRMM 228
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 39/205 (19%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ-------ELNILRQTNSPYIV 115
Q +G G+ GTV+K + +A+ L V T P PQ E+ +LR+T I+
Sbjct: 18 QRIGSGSFGTVYKGKWHGDVAVKMLNV------TAPTPQQLQAFKNEVGVLRKTRHVNIL 71
Query: 116 KCHQIFTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQVLKGLFYMHSRNI 174
TKP +++I+ ++ + SL ++ S + + I+RQ +G+ Y+H+++I
Sbjct: 72 LFMGYSTKP--QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSI 129
Query: 175 VHRDIKPANVLINE----------------------KMEHPCGYSCLYESGEARHRKHGG 212
+HRD+K N+ ++E + E G S L+ + E +
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSG-SILWMAPEVIRMQDSN 188
Query: 213 YNGFAADIWSFGVTMMELYMGYYPF 237
F +D+++FG+ + EL G P+
Sbjct: 189 PYSFQSDVYAFGIVLYELMTGQLPY 213
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 25/218 (11%)
Query: 101 QELNILRQTNSPYIVKCHQIFTKPSGE-VSILMEYMDAGSLEIYVKSRGRLSEDIICTIS 159
QE+ IL++ + P +VK ++ P+ + + ++ E ++ G + + V + LSED
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV-MEVPTLKPLSEDQARFYF 143
Query: 160 RQVLKGLFYMHSRNIVHRDIKPANVLINEKME---HPCGYSCLYESGEARHRKHGG---- 212
+ ++KG+ Y+H + I+HRDIKP+N+L+ E G S ++ +A G
Sbjct: 144 QDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAF 203
Query: 213 ------------YNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPS 260
++G A D+W+ GVT+ G PF++ + L + E P
Sbjct: 204 MAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD--ERIMCLHSKIKSQALEFPD 261
Query: 261 LPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLA 298
P+ +E +D I L K +P R ++ HP++
Sbjct: 262 QPDI-AEDLKDLITRMLDK-NPESRIVVPEIKLHPWVT 297
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 39/205 (19%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ-------ELNILRQTNSPYIV 115
Q +G G+ GTV+K + +A+ L V T P PQ E+ +LR+T I+
Sbjct: 30 QRIGSGSFGTVYKGKWHGDVAVKMLNV------TAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 116 KCHQIFTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQVLKGLFYMHSRNI 174
TKP +++I+ ++ + SL ++ S + + I+RQ +G+ Y+H+++I
Sbjct: 84 LFMGYSTKP--QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSI 141
Query: 175 VHRDIKPANVLINE----------------------KMEHPCGYSCLYESGEARHRKHGG 212
+HRD+K N+ ++E + E G S L+ + E +
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSG-SILWMAPEVIRMQDSN 200
Query: 213 YNGFAADIWSFGVTMMELYMGYYPF 237
F +D+++FG+ + EL G P+
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 113/258 (43%), Gaps = 45/258 (17%)
Query: 59 LEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCH 118
L+ ++ LG G G V+ + + + Q E N+++Q +V+ +
Sbjct: 15 LKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRG--RLSEDIICTISRQVLKGLFYMHSRNIVH 176
+ T+ + I+ EYM+ GSL ++K+ +L+ + + ++ Q+ +G+ ++ RN +H
Sbjct: 75 AVVTQEP--IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 132
Query: 177 RDIKPANVLINEKME---HPCGYSCLYESGEARHRKHG------------GYNGFA--AD 219
RD++ AN+L+++ + G + L E E R+ Y F +D
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 220 IWSFGVTMMEL-------YMGY------------YPFLEPGQEPDFLSLMLAICFREPPS 260
+WSFG+ + E+ Y G Y + P P+ L ++ +C++E P
Sbjct: 193 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERP- 251
Query: 261 LPECSSEKFRDFIRCCLQ 278
D++R L+
Sbjct: 252 ----EDRPTFDYLRSVLE 265
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 116/266 (43%), Gaps = 37/266 (13%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNS-PYIVKCHQIFTK 123
LG+G+ K HK++ +A+K++ R +E+ L+ P IVK H++F
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIIS-KRMEANTQKEITALKLCEGHPNIVKLHEVF-H 76
Query: 124 PSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPAN 183
++ME ++ G L +K + SE I R+++ + +MH +VHRD+KP N
Sbjct: 77 DQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPEN 136
Query: 184 VLI-----------------------NEKMEHPCGYSCLYESGEARHRKHGGYNGFAADI 220
+L N+ ++ PC ++ Y + E ++ GY+ + D+
Sbjct: 137 LLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC-FTLHYAAPELLNQ--NGYDE-SCDL 192
Query: 221 WSFGVTMMELYMGYYPF------LEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIR 274
WS GV + + G PF L + + + F + S++ +D I+
Sbjct: 193 WSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQ 252
Query: 275 CCLQKGDPSKRWTASQLLSHPFLADA 300
L DP+KR S L + +L D
Sbjct: 253 GLLTV-DPNKRLKMSGLRYNEWLQDG 277
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 113/287 (39%), Gaps = 51/287 (17%)
Query: 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALK-VMQCDRGTPPNPQELNILRQTNSPYIV 115
S E++ VLGQG G V K R+ YA+K + + E+ +L N Y+V
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVV 65
Query: 116 KCH------QIFTKPSGEVS------ILMEYMDAGSLEIYVKSRG-RLSEDIICTISRQV 162
+ + + F KP V I EY + +L + S D + RQ+
Sbjct: 66 RYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQI 125
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYES-------------------- 202
L+ L Y+HS+ I+HR++KP N+ I+E G L ++
Sbjct: 126 LEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 203 ------GEARHRK------HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLM 250
G A + G YN D +S G+ E YPF + + L +
Sbjct: 186 NLTSAIGTAXYVATEVLDGTGHYNE-KIDXYSLGIIFFE---XIYPFSTGXERVNILKKL 241
Query: 251 LAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297
++ PP + + + IR + DP+KR A LL+ +L
Sbjct: 242 RSVSIEFPPDFDDNKXKVEKKIIRLLIDH-DPNKRPGARTLLNSGWL 287
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 107/245 (43%), Gaps = 52/245 (21%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VKS+ +L++D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKSQ-KLTDDHV 127
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHP------CGYSCLYESGEARHRK 209
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE E C ++ +G R
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRW 187
Query: 210 HGG---------YNGFAADIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAICFREPP 259
+ YN DIWS G M EL G F PG + D L L+L +
Sbjct: 188 YRAPEIMLNWMHYNQ-TVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLVGTPGA 244
Query: 260 S-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTASQLLS 293
L + SSE R++I+ Q D KR TA+Q L+
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 304
Query: 294 HPFLA 298
H + A
Sbjct: 305 HAYFA 309
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 108/253 (42%), Gaps = 33/253 (13%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ----ELNILRQTNSPYIVKC 117
L+ +G+GN V RH T A+K++ + + Q E+ I + N P IVK
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKL 78
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
++ + + ++ EY G + Y+ + GR E RQ++ + Y H + IVHR
Sbjct: 79 FEVI-ETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFIVHR 137
Query: 178 DIKPANVLIN-------------------EKMEHPCGYSCLYESGEARHRKHGGYNGFAA 218
D+K N+L++ K++ CG + Y + E K Y+G
Sbjct: 138 DLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCG-APPYAAPELFQGKK--YDGPEV 194
Query: 219 DIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQ 278
D+WS GV + L G PF GQ L + R +P S + ++ L
Sbjct: 195 DVWSLGVILYTLVSGSLPF--DGQN---LKELRERVLRGKYRIPFYXSTDCENLLKKFLI 249
Query: 279 KGDPSKRWTASQL 291
+PSKR T Q+
Sbjct: 250 L-NPSKRGTLEQI 261
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 107/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 127
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L ++G ARH G
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DAGLARHTD-DEMTG 181
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 239
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 300 AQALAHAYFA 309
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 105/261 (40%), Gaps = 36/261 (13%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALK------VMQCDRGTPPNPQELNILRQTNSPYIVK 116
+G+G+ G V K T A K V DR QE+ I++ + P I++
Sbjct: 15 NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFK----QEIEIMKSLDHPNIIR 70
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVH 176
++ F + + ++ ++ME G L V + E I + VL + Y H N+ H
Sbjct: 71 LYETF-EDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAH 129
Query: 177 RDIKPANVL-INEKMEHPC-----GYSCLYESGEARHRKHG-----------GYNGFAAD 219
RD+KP N L + + + P G + ++ G+ K G G G D
Sbjct: 130 RDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLYGPECD 189
Query: 220 IWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAI---CFREPPSLPECSSEKFRDFIRCC 276
WS GV M L GY PF P +ML I F P S + IR
Sbjct: 190 EWSAGVMMYVLLCGYPPFSAPTDX----EVMLKIREGTFTFPEKDWLNVSPQAESLIRRL 245
Query: 277 LQKGDPSKRWTASQLLSHPFL 297
L K P +R T+ Q L H +
Sbjct: 246 LTKS-PKQRITSLQALEHEWF 265
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 101/214 (47%), Gaps = 33/214 (15%)
Query: 49 YGQEIDGLSQLEKLQVLGQGNGGTV----FKVRHKQTL--ALYALKVMQCDRGTPPNPQE 102
+ +EID S ++ +V+G G G V KV K+ + A+ LK D+ E
Sbjct: 22 FAKEIDA-SCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSE 80
Query: 103 LNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQ 161
+I+ Q + P I+ + TK V I+ EYM+ GSL+ ++ K+ GR + + + R
Sbjct: 81 ASIMGQFDHPNIIHLEGVVTK-CKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRG 139
Query: 162 VLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS------CLYESGEARHRKHGG--- 212
+ G+ Y+ + VHRD+ N+L+N + C S L + EA + GG
Sbjct: 140 IGSGMKYLSDMSAVHRDLAARNILVNSNL--VCKVSDFGMSRVLEDDPEAAYTTRGGKIP 197
Query: 213 ----------YNGF--AADIWSFGVTMMELYMGY 234
Y F A+D+WS+G+ M E+ M Y
Sbjct: 198 IRWTAPEAIAYRKFTSASDVWSYGIVMWEV-MSY 230
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKXQ-KLTDDHV 127
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE E + + G ARH G
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELK-----ILDFGLARHTD-DEMTG 181
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 239
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 300 AQALAHAYFA 309
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 105/261 (40%), Gaps = 36/261 (13%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALK------VMQCDRGTPPNPQELNILRQTNSPYIVK 116
+G+G+ G V K T A K V DR QE+ I++ + P I++
Sbjct: 32 NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFK----QEIEIMKSLDHPNIIR 87
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVH 176
++ F + + ++ ++ME G L V + E I + VL + Y H N+ H
Sbjct: 88 LYETF-EDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAH 146
Query: 177 RDIKPANVL-INEKMEHPC-----GYSCLYESGEARHRKHG-----------GYNGFAAD 219
RD+KP N L + + + P G + ++ G+ K G G G D
Sbjct: 147 RDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLYGPECD 206
Query: 220 IWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAI---CFREPPSLPECSSEKFRDFIRCC 276
WS GV M L GY PF P +ML I F P S + IR
Sbjct: 207 EWSAGVMMYVLLCGYPPFSAPTDX----EVMLKIREGTFTFPEKDWLNVSPQAESLIRRL 262
Query: 277 LQKGDPSKRWTASQLLSHPFL 297
L K P +R T+ Q L H +
Sbjct: 263 LTKS-PKQRITSLQALEHEWF 282
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 127
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DGGLARHTD-DEMTG 181
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 239
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 300 AQALAHAYFA 309
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 109/251 (43%), Gaps = 33/251 (13%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQIFTKP 124
LG+G+ G V ++ KQT A+K ++ + +EL SP IV + +
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVF---RAEELMACAGLTSPRIVPLYGA-VRE 156
Query: 125 SGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANV 184
V+I ME ++ GSL VK +G L ED Q L+GL Y+HSR I+H D+K NV
Sbjct: 157 GPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNV 216
Query: 185 LINEKMEHP--CGYS---CLYESGEARHRKHGGY-----------------NGFAADIWS 222
L++ H C + CL G + G Y D+WS
Sbjct: 217 LLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWS 276
Query: 223 FGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPP--SLPECSSEKFRDFIRCCLQKG 280
M+ + G +P+ + + P L L I PP +P + I+ L+K
Sbjct: 277 SCCMMLHMLNGCHPWTQFFRGP----LCLKIASEPPPVREIPPSCAPLTAQAIQEGLRK- 331
Query: 281 DPSKRWTASQL 291
+P R +A++L
Sbjct: 332 EPIHRVSAAEL 342
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 127
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMAG 181
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
F A DIWS G M EL G F PG + D L L+L +
Sbjct: 182 FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 239
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 300 AQALAHAYFA 309
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 109/251 (43%), Gaps = 33/251 (13%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQIFTKP 124
LG+G+ G V ++ KQT A+K ++ + +EL SP IV + +
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVF---RAEELMACAGLTSPRIVPLYGA-VRE 137
Query: 125 SGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANV 184
V+I ME ++ GSL VK +G L ED Q L+GL Y+HSR I+H D+K NV
Sbjct: 138 GPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNV 197
Query: 185 LINEKMEHP--CGYS---CLYESGEARHRKHGGY-----------------NGFAADIWS 222
L++ H C + CL G + G Y D+WS
Sbjct: 198 LLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWS 257
Query: 223 FGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPP--SLPECSSEKFRDFIRCCLQKG 280
M+ + G +P+ + + P L L I PP +P + I+ L+K
Sbjct: 258 SCCMMLHMLNGCHPWTQFFRGP----LCLKIASEPPPVREIPPSCAPLTAQAIQEGLRK- 312
Query: 281 DPSKRWTASQL 291
+P R +A++L
Sbjct: 313 EPIHRVSAAEL 323
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 32/210 (15%)
Query: 49 YGQEIDGLSQLEKLQVLGQGNGGTV----FKVRHKQTL--ALYALKVMQCDRGTPPNPQE 102
+ +EID S ++ +V+G G G V KV K+ + A+ LK D+ E
Sbjct: 1 FAKEIDA-SCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSE 59
Query: 103 LNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQ 161
+I+ Q + P I+ + TK V I+ EYM+ GSL+ ++ K+ GR + + + R
Sbjct: 60 ASIMGQFDHPNIIHLEGVVTK-CKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRG 118
Query: 162 VLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS------CLYESGEARHRKHGG--- 212
+ G+ Y+ + VHRD+ N+L+N + C S L + EA + GG
Sbjct: 119 IGSGMKYLSDMSYVHRDLAARNILVNSNL--VCKVSDFGMSRVLEDDPEAAYTTRGGKIP 176
Query: 213 ----------YNGF--AADIWSFGVTMMEL 230
Y F A+D+WS+G+ M E+
Sbjct: 177 IRWTAPEAIAYRKFTSASDVWSYGIVMWEV 206
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 113/258 (43%), Gaps = 45/258 (17%)
Query: 59 LEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCH 118
L+ ++ LG G G V+ + + + Q E N+++Q +V+ +
Sbjct: 23 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 82
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRG--RLSEDIICTISRQVLKGLFYMHSRNIVH 176
+ T+ + I+ EYM+ GSL ++K+ +L+ + + ++ Q+ +G+ ++ RN +H
Sbjct: 83 AVVTQEP--IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 140
Query: 177 RDIKPANVLINEKME---HPCGYSCLYESGEARHRKHG------------GYNGFA--AD 219
RD++ AN+L+++ + G + L E E R+ Y F +D
Sbjct: 141 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 200
Query: 220 IWSFGVTMMEL-------YMGY------------YPFLEPGQEPDFLSLMLAICFREPPS 260
+WSFG+ + E+ Y G Y + P P+ L ++ +C++E P
Sbjct: 201 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERP- 259
Query: 261 LPECSSEKFRDFIRCCLQ 278
D++R L+
Sbjct: 260 ----EDRPTFDYLRSVLE 273
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 113/258 (43%), Gaps = 45/258 (17%)
Query: 59 LEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCH 118
L+ ++ LG G G V+ + + + Q E N+++Q +V+ +
Sbjct: 21 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 80
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRG--RLSEDIICTISRQVLKGLFYMHSRNIVH 176
+ T+ + I+ EYM+ GSL ++K+ +L+ + + ++ Q+ +G+ ++ RN +H
Sbjct: 81 AVVTQEP--IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 138
Query: 177 RDIKPANVLINEKME---HPCGYSCLYESGEARHRKHG------------GYNGFA--AD 219
RD++ AN+L+++ + G + L E E R+ Y F +D
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 198
Query: 220 IWSFGVTMMEL-------YMGY------------YPFLEPGQEPDFLSLMLAICFREPPS 260
+WSFG+ + E+ Y G Y + P P+ L ++ +C++E P
Sbjct: 199 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERP- 257
Query: 261 LPECSSEKFRDFIRCCLQ 278
D++R L+
Sbjct: 258 ----EDRPTFDYLRSVLE 271
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 127
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMAG 181
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
F A DIWS G M EL G F PG + D L L+L +
Sbjct: 182 FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 239
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 240 GTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 300 AQALAHAYFA 309
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 121/308 (39%), Gaps = 80/308 (25%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ-------ELNILRQTNSPYIVKC 117
+GQG+ G V QT A+ A+K+M ++ NP+ E+ ++++ + P I +
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 118 HQIFTKPSGEVSILMEYMDAG----SLEIYVK-SRGRLSEDIICT--------------- 157
++++ + + ++ME G L +++ S G+ + D++ T
Sbjct: 94 YEVY-EDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAING 152
Query: 158 --------------------ISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS 197
I RQ+ L Y+H++ I HRDIKP N L +
Sbjct: 153 SIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLV 212
Query: 198 CLYESGEARHRKHGGYNGFAA------------------------DIWSFGVTMMELYMG 233
S E +G Y G D WS GV + L MG
Sbjct: 213 DFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMG 272
Query: 234 YYPFLEPG-QEPDFLSLML--AICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQ 290
PF PG + D +S +L +CF P S RD + L + + +R+ A +
Sbjct: 273 AVPF--PGVNDADTISQVLNKKLCFENPNY--NVLSPLARDLLSNLLNR-NVDERFDAMR 327
Query: 291 LLSHPFLA 298
L HP+++
Sbjct: 328 ALQHPWIS 335
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 113/258 (43%), Gaps = 45/258 (17%)
Query: 59 LEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCH 118
L+ ++ LG G G V+ + + + Q E N+++Q +V+ +
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRG--RLSEDIICTISRQVLKGLFYMHSRNIVH 176
+ T+ + I+ EYM+ GSL ++K+ +L+ + + ++ Q+ +G+ ++ RN +H
Sbjct: 75 AVVTQEP--IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 132
Query: 177 RDIKPANVLINEKME---HPCGYSCLYESGEARHRKHG------------GYNGFA--AD 219
RD++ AN+L+++ + G + L E E R+ Y F +D
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 220 IWSFGVTMMEL-------YMGY------------YPFLEPGQEPDFLSLMLAICFREPPS 260
+WSFG+ + E+ Y G Y + P P+ L ++ +C++E P
Sbjct: 193 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERP- 251
Query: 261 LPECSSEKFRDFIRCCLQ 278
D++R L+
Sbjct: 252 ----EDRPTFDYLRSVLE 265
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 32/210 (15%)
Query: 49 YGQEIDGLSQLEKLQVLGQGNGGTV----FKVRHKQTL--ALYALKVMQCDRGTPPNPQE 102
+ +EID S ++ +V+G G G V KV K+ + A+ LK D+ E
Sbjct: 7 FAKEIDA-SCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSE 65
Query: 103 LNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQ 161
+I+ Q + P I+ + TK V I+ EYM+ GSL+ ++ K+ GR + + + R
Sbjct: 66 ASIMGQFDHPNIIHLEGVVTK-CKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRG 124
Query: 162 VLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS------CLYESGEARHRKHGG--- 212
+ G+ Y+ + VHRD+ N+L+N + C S L + EA + GG
Sbjct: 125 IGSGMKYLSDMSYVHRDLAARNILVNSNL--VCKVSDFGMSRVLEDDPEAAYTTRGGKIP 182
Query: 213 ----------YNGF--AADIWSFGVTMMEL 230
Y F A+D+WS+G+ M E+
Sbjct: 183 IRWTAPEAIAYRKFTSASDVWSYGIVMWEV 212
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 113/258 (43%), Gaps = 45/258 (17%)
Query: 59 LEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCH 118
L+ ++ LG G G V+ + + + Q E N+++Q +V+ +
Sbjct: 17 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 76
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRG--RLSEDIICTISRQVLKGLFYMHSRNIVH 176
+ T+ + I+ EYM+ GSL ++K+ +L+ + + ++ Q+ +G+ ++ RN +H
Sbjct: 77 AVVTQEP--IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 134
Query: 177 RDIKPANVLINEKME---HPCGYSCLYESGEARHRKHG------------GYNGFA--AD 219
RD++ AN+L+++ + G + L E E R+ Y F +D
Sbjct: 135 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 194
Query: 220 IWSFGVTMMEL-------YMGY------------YPFLEPGQEPDFLSLMLAICFREPPS 260
+WSFG+ + E+ Y G Y + P P+ L ++ +C++E P
Sbjct: 195 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERP- 253
Query: 261 LPECSSEKFRDFIRCCLQ 278
D++R L+
Sbjct: 254 ----EDRPTFDYLRSVLE 267
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 116/282 (41%), Gaps = 46/282 (16%)
Query: 62 LQVLGQGNGGTVFKVRHK--QTLALYALKVMQCDRGTPPNP-QELNILRQTNSPYIVKCH 118
L+ +G+G G V+K ++ +T AL +++ + D G P +E++IL++ IVK +
Sbjct: 7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRD 178
+ + ++ E++D ++ G L + Q+L G+ Y H R ++HRD
Sbjct: 67 DVI-HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRD 125
Query: 179 IKPANVLINEKMEHPCGYSCLYESGEARHRKHG---------------GYNGFAA--DIW 221
+KP N+LIN + E L + RK+ G ++ DIW
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 222 SFGVTMMELYMGYYPFLEPGQEPDFLSLMLAIC----FREPPSLPECSSEK--------- 268
S G E+ G P E D L + I + P++ E
Sbjct: 186 SVGCIFAEMVNG-TPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPL 244
Query: 269 -FRDFIRCCLQKG----------DPSKRWTASQLLSHPFLAD 299
+ F++ + G DP++R TA Q L H + +
Sbjct: 245 PWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 116/282 (41%), Gaps = 46/282 (16%)
Query: 62 LQVLGQGNGGTVFKVRHK--QTLALYALKVMQCDRGTPPNP-QELNILRQTNSPYIVKCH 118
L+ +G+G G V+K ++ +T AL +++ + D G P +E++IL++ IVK +
Sbjct: 7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRD 178
+ + ++ E++D ++ G L + Q+L G+ Y H R ++HRD
Sbjct: 67 DVI-HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRD 125
Query: 179 IKPANVLINEKMEHPCGYSCLYESGEARHRKHG---------------GYNGFAA--DIW 221
+KP N+LIN + E L + RK+ G ++ DIW
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 222 SFGVTMMELYMGYYPFLEPGQEPDFLSLMLAIC----FREPPSLPECSSEK--------- 268
S G E+ G P E D L + I + P++ E
Sbjct: 186 SVGCIFAEMVNG-TPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPL 244
Query: 269 -FRDFIRCCLQKG----------DPSKRWTASQLLSHPFLAD 299
+ F++ + G DP++R TA Q L H + +
Sbjct: 245 PWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 113/258 (43%), Gaps = 45/258 (17%)
Query: 59 LEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCH 118
L+ ++ LG G G V+ + + + Q E N+++Q +V+ +
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRG--RLSEDIICTISRQVLKGLFYMHSRNIVH 176
+ T+ + I+ EYM+ GSL ++K+ +L+ + + ++ Q+ +G+ ++ RN +H
Sbjct: 75 AVVTQEP--IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 132
Query: 177 RDIKPANVLINEKME---HPCGYSCLYESGEARHRKHG------------GYNGFA--AD 219
RD++ AN+L+++ + G + L E E R+ Y F +D
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 220 IWSFGVTMMEL-------YMGY------------YPFLEPGQEPDFLSLMLAICFREPPS 260
+WSFG+ + E+ Y G Y + P P+ L ++ +C++E P
Sbjct: 193 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERP- 251
Query: 261 LPECSSEKFRDFIRCCLQ 278
D++R L+
Sbjct: 252 ----EDRPTFDYLRSVLE 265
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 113/258 (43%), Gaps = 45/258 (17%)
Query: 59 LEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCH 118
L+ ++ LG G G V+ + + + Q E N+++Q +V+ +
Sbjct: 16 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 75
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRG--RLSEDIICTISRQVLKGLFYMHSRNIVH 176
+ T+ + I+ EYM+ GSL ++K+ +L+ + + ++ Q+ +G+ ++ RN +H
Sbjct: 76 AVVTQEP--IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 133
Query: 177 RDIKPANVLINEKME---HPCGYSCLYESGEARHRKHG------------GYNGFA--AD 219
RD++ AN+L+++ + G + L E E R+ Y F +D
Sbjct: 134 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 193
Query: 220 IWSFGVTMMEL-------YMGY------------YPFLEPGQEPDFLSLMLAICFREPPS 260
+WSFG+ + E+ Y G Y + P P+ L ++ +C++E P
Sbjct: 194 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERP- 252
Query: 261 LPECSSEKFRDFIRCCLQ 278
D++R L+
Sbjct: 253 ----EDRPTFDYLRSVLE 266
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 112/265 (42%), Gaps = 26/265 (9%)
Query: 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELN----ILRQTNSP 112
S + + LG+G V + YA K++ + + + Q+L I R P
Sbjct: 22 SMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 81
Query: 113 YIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSR 172
IV+ H ++ G ++ + + G L + +R SE +Q+L+ + + H
Sbjct: 82 NIVRLHDSISE-EGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM 140
Query: 173 NIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFAA-------------- 218
+VHRD+KP N+L+ K++ + + + GFA
Sbjct: 141 GVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDP 200
Query: 219 -----DIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFI 273
D+W+ GV + L +GY PF + Q + + A + P + + + +D I
Sbjct: 201 YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIK-AGAYDFPSPEWDTVTPEAKDLI 259
Query: 274 RCCLQKGDPSKRWTASQLLSHPFLA 298
L +PSKR TA++ L HP+++
Sbjct: 260 NKMLTI-NPSKRITAAEALKHPWIS 283
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 113/258 (43%), Gaps = 45/258 (17%)
Query: 59 LEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCH 118
L+ ++ LG G G V+ + + + Q E N+++Q +V+ +
Sbjct: 24 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 83
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRG--RLSEDIICTISRQVLKGLFYMHSRNIVH 176
+ T+ + I+ EYM+ GSL ++K+ +L+ + + ++ Q+ +G+ ++ RN +H
Sbjct: 84 AVVTQEP--IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 141
Query: 177 RDIKPANVLINEKME---HPCGYSCLYESGEARHRKHG------------GYNGFA--AD 219
RD++ AN+L+++ + G + L E E R+ Y F +D
Sbjct: 142 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 201
Query: 220 IWSFGVTMMEL-------YMGY------------YPFLEPGQEPDFLSLMLAICFREPPS 260
+WSFG+ + E+ Y G Y + P P+ L ++ +C++E P
Sbjct: 202 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERP- 260
Query: 261 LPECSSEKFRDFIRCCLQ 278
D++R L+
Sbjct: 261 ----EDRPTFDYLRSVLE 274
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 112/261 (42%), Gaps = 34/261 (13%)
Query: 46 AASYGQEIDGL-----SQLEKLQVLGQGNGGTV---FKVRHKQTLALYAL-KVMQCDRGT 96
A Y QE++ +L+ L+ +G G G+V + R +Q +A+ L + Q
Sbjct: 12 AGFYRQELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHA 71
Query: 97 PPNPQELNILRQTNSPYIVKCHQIFTKPSG-----EVSILMEYMDAGSLEIYVKSRGRLS 151
+EL +L+ ++ +FT + EV ++ M A L VKS+ LS
Sbjct: 72 RRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGA-DLNNIVKSQA-LS 129
Query: 152 EDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHG 211
++ + + Q+L+GL Y+HS I+HRD+KP+NV +NE E L + +
Sbjct: 130 DEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYV 189
Query: 212 GYNGFAA--------------DIWSFGVTMMELYMGYYPFLEPGQE--PDFLSLMLAICF 255
+ A DIWS G M EL G F PG + +M +
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALF--PGSDYIDQLKRIMEVVGT 247
Query: 256 REPPSLPECSSEKFRDFIRCC 276
P L + SSE R +I+
Sbjct: 248 PSPEVLAKISSEHARTYIQSL 268
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 37/204 (18%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ-------ELNILRQTNSPYIV 115
Q +G G+ GTV+K + +A+ L V T P PQ E+ +LR+T I+
Sbjct: 19 QRIGSGSFGTVYKGKWHGDVAVKMLNV------TAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 116 KCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDI-ICTISRQVLKGLFYMHSRNI 174
TKP +++I+ ++ + SL ++ E I + I+RQ +G+ Y+H+++I
Sbjct: 73 LFMGYSTKP--QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 130
Query: 175 VHRDIKPANVLINEKMEHPCGY---------------------SCLYESGEARHRKHGGY 213
+HRD+K N+ ++E + G S L+ + E +
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 214 NGFAADIWSFGVTMMELYMGYYPF 237
F +D+++FG+ + EL G P+
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 112/260 (43%), Gaps = 38/260 (14%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN--PQELNILRQTNSPYIVKCHQIFT 122
LG+G G V + + Y K ++ +GT +E++IL I+ H+ F
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKV-KGTDQVLVKKEISILNIARHRNILHLHESF- 70
Query: 123 KPSGEVSILMEYMDAGSLEIYVK---SRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDI 179
+ E+ ++ E++ L+I+ + S L+E I + QV + L ++HS NI H DI
Sbjct: 71 ESMEELVMIFEFISG--LDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDI 128
Query: 180 KPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGF----------------------A 217
+P N++ + + E G+AR K G + F A
Sbjct: 129 RPENIIYQTRRSSTIK---IIEFGQARQLKPG--DNFRLLFTAPEYYAPEVHQHDVVSTA 183
Query: 218 ADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCL 277
D+WS G + L G PFL + ++M A + + E S E DF+ L
Sbjct: 184 TDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAM-DFVDRLL 242
Query: 278 QKGDPSKRWTASQLLSHPFL 297
K S R TAS+ L HP+L
Sbjct: 243 VKERKS-RMTASEALQHPWL 261
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 105/218 (48%), Gaps = 34/218 (15%)
Query: 47 ASYGQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ----E 102
+SY EI+ S++ +G G+ GTV+K + +A+ LKV+ TP Q E
Sbjct: 27 SSYYWEIEA-SEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDP---TPEQFQAFRNE 82
Query: 103 LNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVK-SRGRLSEDIICTISRQ 161
+ +LR+T I+ TK + ++I+ ++ + SL ++ + + I+RQ
Sbjct: 83 VAVLRKTRHVNILLFMGYMTKDN--LAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQ 140
Query: 162 VLKGLFYMHSRNIVHRDIKPANVLINE----------------------KMEHPCGYSCL 199
+G+ Y+H++NI+HRD+K N+ ++E ++E P G S L
Sbjct: 141 TAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTG-SVL 199
Query: 200 YESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPF 237
+ + E + F +D++S+G+ + EL G P+
Sbjct: 200 WMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPY 237
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKXQ-KLTDDHV 127
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMTG 181
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 239
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 300 AQALAHAYFA 309
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 81 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 138
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE E + + G ARH G
Sbjct: 139 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELK-----ILDFGLARHTD-DEMTG 192
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 193 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 250
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 251 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 310
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 311 AQALAHAYFA 320
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 127
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DRGLARHTD-DEMTG 181
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 239
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 300 AQALAHAYFA 309
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 37/204 (18%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ-------ELNILRQTNSPYIV 115
Q +G G+ GTV+K + +A+ L V T P PQ E+ +LR+T I+
Sbjct: 16 QRIGSGSFGTVYKGKWHGDVAVKMLNV------TAPTPQQLQAFKNEVGVLRKTRHVNIL 69
Query: 116 KCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDI-ICTISRQVLKGLFYMHSRNI 174
TKP +++I+ ++ + SL ++ E I + I+RQ +G+ Y+H+++I
Sbjct: 70 LFMGYSTKP--QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 127
Query: 175 VHRDIKPANVLINEKMEHPCGY---------------------SCLYESGEARHRKHGGY 213
+HRD+K N+ ++E + G S L+ + E +
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 187
Query: 214 NGFAADIWSFGVTMMELYMGYYPF 237
F +D+++FG+ + EL G P+
Sbjct: 188 YSFQSDVYAFGIVLYELMTGQLPY 211
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 123
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 124 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMAG 177
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
F A DIWS G M EL G F PG + D L L+L +
Sbjct: 178 FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 235
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 236 GTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 295
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 296 AQALAHAYFA 305
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 37/204 (18%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ-------ELNILRQTNSPYIV 115
Q +G G+ GTV+K + +A+ L V T P PQ E+ +LR+T I+
Sbjct: 19 QRIGSGSFGTVYKGKWHGDVAVKMLNV------TAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 116 KCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDI-ICTISRQVLKGLFYMHSRNI 174
TKP +++I+ ++ + SL ++ E I + I+RQ +G+ Y+H+++I
Sbjct: 73 LFMGYSTKP--QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 130
Query: 175 VHRDIKPANVLINEKMEHPCGY---------------------SCLYESGEARHRKHGGY 213
+HRD+K N+ ++E + G S L+ + E +
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 214 NGFAADIWSFGVTMMELYMGYYPF 237
F +D+++FG+ + EL G P+
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 37/204 (18%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ-------ELNILRQTNSPYIV 115
Q +G G+ GTV+K + +A+ L V T P PQ E+ +LR+T I+
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNV------TAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 116 KCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDI-ICTISRQVLKGLFYMHSRNI 174
TKP +++I+ ++ + SL ++ E I + I+RQ +G+ Y+H+++I
Sbjct: 68 LFMGYSTKP--QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 125
Query: 175 VHRDIKPANVLINEKMEHPCGY---------------------SCLYESGEARHRKHGGY 213
+HRD+K N+ ++E + G S L+ + E +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 214 NGFAADIWSFGVTMMELYMGYYPF 237
F +D+++FG+ + EL G P+
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 116/282 (41%), Gaps = 46/282 (16%)
Query: 62 LQVLGQGNGGTVFKVRHK--QTLALYALKVMQCDRGTPPNP-QELNILRQTNSPYIVKCH 118
L+ +G+G G V+K ++ +T AL +++ + D G P +E++IL++ IVK +
Sbjct: 7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRD 178
+ + ++ E++D ++ G L + Q+L G+ Y H R ++HRD
Sbjct: 67 DVI-HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRD 125
Query: 179 IKPANVLINEKMEHPCGYSCLYESGEARHRKHG---------------GYNGFAA--DIW 221
+KP N+LIN + E L + RK+ G ++ DIW
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 222 SFGVTMMELYMGYYPFLEPGQEPDFLSLMLAIC----FREPPSLPECSSEK--------- 268
S G E+ G P E D L + I + P++ E
Sbjct: 186 SVGCIFAEMVNG-APLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPL 244
Query: 269 -FRDFIRCCLQKG----------DPSKRWTASQLLSHPFLAD 299
+ F++ + G DP++R TA Q L H + +
Sbjct: 245 PWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 37/204 (18%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELN-------ILRQTNSPYIV 115
Q +G G+ GTV+K + +A+ L V T P PQ+L +LR+T I+
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNV------TAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 116 KCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDI-ICTISRQVLKGLFYMHSRNI 174
TKP +++I+ ++ + SL ++ E I + I+RQ +G+ Y+H+++I
Sbjct: 68 LFMGYSTKP--QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 125
Query: 175 VHRDIKPANVLINEKMEHPCGY---------------------SCLYESGEARHRKHGGY 213
+HRD+K N+ ++E + G S L+ + E +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 214 NGFAADIWSFGVTMMELYMGYYPF 237
F +D+++FG+ + EL G P+
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 127
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMTG 181
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 182 YVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 239
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 300 AQALAHAYFA 309
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 132
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE E + + G ARH G
Sbjct: 133 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELK-----ILDFGLARHTD-DEMTG 186
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 187 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 244
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 245 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 304
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 305 AQALAHAYFA 314
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 132
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE E + + G ARH G
Sbjct: 133 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELK-----ILDFGLARHTD-DEMTG 186
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 187 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 244
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 245 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 304
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 305 AQALAHAYFA 314
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 95/205 (46%), Gaps = 39/205 (19%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ-------ELNILRQTNSPYIV 115
Q +G G+ GTV+K + +A+ L V T P PQ E+ +LR+T I+
Sbjct: 30 QRIGSGSFGTVYKGKWHGDVAVKMLNV------TAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 116 KCHQIFTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQVLKGLFYMHSRNI 174
T P +++I+ ++ + SL ++ S + + I+RQ +G+ Y+H+++I
Sbjct: 84 LFMGYSTAP--QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSI 141
Query: 175 VHRDIKPANVLINE----------------------KMEHPCGYSCLYESGEARHRKHGG 212
+HRD+K N+ ++E + E G S L+ + E +
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSG-SILWMAPEVIRMQDSN 200
Query: 213 YNGFAADIWSFGVTMMELYMGYYPF 237
F +D+++FG+ + EL G P+
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 108/256 (42%), Gaps = 26/256 (10%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELN----ILRQTNSPYIVKCHQI 120
LG+G V + K YA K++ + + + Q+L I R P IV+ H
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 98
Query: 121 FTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIK 180
++ G ++ + + G L + +R SE Q+L+ + ++H +IVHRD+K
Sbjct: 99 ISE-EGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHDIVHRDLK 157
Query: 181 PANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFAA-------------------DIW 221
P N+L+ K + + + + GFA DIW
Sbjct: 158 PENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIW 217
Query: 222 SFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGD 281
+ GV + L +GY PF + Q + + A + P + + + ++ I L +
Sbjct: 218 ACGVILYILLVGYPPFWDEDQHKLYQQIK-AGAYDFPSPEWDTVTPEAKNLINQMLTI-N 275
Query: 282 PSKRWTASQLLSHPFL 297
P+KR TA Q L HP++
Sbjct: 276 PAKRITADQALKHPWV 291
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 120/292 (41%), Gaps = 51/292 (17%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ----ELNILRQTNS 111
+ + EK+ +G+G+ G VFK R++ T + A+K P + E+ +L+Q
Sbjct: 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKH 61
Query: 112 PYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHS 171
P +V ++F + + ++ EY D L + + + E ++ +I+ Q L+ + + H
Sbjct: 62 PNLVNLLEVFRR-KRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK 120
Query: 172 RNIVHRDIKPANVLINE-KMEHPC--GYSCL------YESGEARHRKH--------GGYN 214
N +HRD+KP N+LI + + C G++ L Y E R +
Sbjct: 121 HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQY 180
Query: 215 GFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSE------- 267
G D+W+ G EL G P + D L L+ P + S
Sbjct: 181 GPPVDVWAIGCVFAELLSG-VPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGV 239
Query: 268 -------------KFRD-------FIRCCLQKGDPSKRWTASQLLSHPFLAD 299
KF + ++ CL DP++R T QLL HP+ +
Sbjct: 240 KIPDPEDMEPLELKFPNISYPALGLLKGCLHM-DPTERLTCEQLLHHPYFEN 290
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 89 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 146
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 147 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMTG 200
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 201 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 258
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 259 GTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 318
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 319 AQALAHAYFA 328
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 37/204 (18%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELN-------ILRQTNSPYIV 115
Q +G G+ GTV+K + +A+ L V T P PQ+L +LR+T I+
Sbjct: 41 QRIGSGSFGTVYKGKWHGDVAVKMLNV------TAPTPQQLQAFKNEVGVLRKTRHVNIL 94
Query: 116 KCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDI-ICTISRQVLKGLFYMHSRNI 174
TKP +++I+ ++ + SL ++ E I + I+RQ +G+ Y+H+++I
Sbjct: 95 LFMGYSTKP--QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 152
Query: 175 VHRDIKPANVLINEKMEHPCGY---------------------SCLYESGEARHRKHGGY 213
+HRD+K N+ ++E + G S L+ + E +
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 212
Query: 214 NGFAADIWSFGVTMMELYMGYYPF 237
F +D+++FG+ + EL G P+
Sbjct: 213 YSFQSDVYAFGIVLYELMTGQLPY 236
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 37/204 (18%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ-------ELNILRQTNSPYIV 115
Q +G G+ GTV+K + +A+ L V T P PQ E+ +LR+T I+
Sbjct: 42 QRIGSGSFGTVYKGKWHGDVAVKMLNV------TAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 116 KCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDI-ICTISRQVLKGLFYMHSRNI 174
TKP +++I+ ++ + SL ++ E I + I+RQ +G+ Y+H+++I
Sbjct: 96 LFMGYSTKP--QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 153
Query: 175 VHRDIKPANVLINEKMEHPCGY---------------------SCLYESGEARHRKHGGY 213
+HRD+K N+ ++E + G S L+ + E +
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 213
Query: 214 NGFAADIWSFGVTMMELYMGYYPF 237
F +D+++FG+ + EL G P+
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 147
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 148 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMTG 201
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 202 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 259
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 260 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 319
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 320 AQALAHAYFA 329
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 127
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DYGLARHTD-DEMTG 181
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 239
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 300 AQALAHAYFA 309
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 133
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 134 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMTG 187
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 245
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 246 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 305
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 306 AQALAHAYFA 315
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 37/204 (18%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELN-------ILRQTNSPYIV 115
Q +G G+ GTV+K + +A+ L V T P PQ+L +LR+T I+
Sbjct: 34 QRIGSGSFGTVYKGKWHGDVAVKMLNV------TAPTPQQLQAFKNEVGVLRKTRHVNIL 87
Query: 116 KCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDI-ICTISRQVLKGLFYMHSRNI 174
TKP +++I+ ++ + SL ++ E I + I+RQ +G+ Y+H+++I
Sbjct: 88 LFMGYSTKP--QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 145
Query: 175 VHRDIKPANVLINEKMEHPCGY---------------------SCLYESGEARHRKHGGY 213
+HRD+K N+ ++E + G S L+ + E +
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 205
Query: 214 NGFAADIWSFGVTMMELYMGYYPF 237
F +D+++FG+ + EL G P+
Sbjct: 206 YSFQSDVYAFGIVLYELMTGQLPY 229
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 127
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMTG 181
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 239
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 300 AQALAHAYFA 309
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 127
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMTG 181
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 239
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 300 AQALAHAYFA 309
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 37/204 (18%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ-------ELNILRQTNSPYIV 115
Q +G G+ GTV+K + +A+ L V T P PQ E+ +LR+T I+
Sbjct: 42 QRIGSGSFGTVYKGKWHGDVAVKMLNV------TAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 116 KCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDI-ICTISRQVLKGLFYMHSRNI 174
TKP +++I+ ++ + SL ++ E I + I+RQ +G+ Y+H+++I
Sbjct: 96 LFMGYSTKP--QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 153
Query: 175 VHRDIKPANVLINEKMEHPCGY---------------------SCLYESGEARHRKHGGY 213
+HRD+K N+ ++E + G S L+ + E +
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 213
Query: 214 NGFAADIWSFGVTMMELYMGYYPF 237
F +D+++FG+ + EL G P+
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 113/258 (43%), Gaps = 45/258 (17%)
Query: 59 LEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCH 118
L+ ++ LG G G V+ + + + Q E N+++Q +V+ +
Sbjct: 21 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 80
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRG--RLSEDIICTISRQVLKGLFYMHSRNIVH 176
+ T+ + I+ EYM+ GSL ++K+ +L+ + + ++ Q+ +G+ ++ RN +H
Sbjct: 81 AVVTQEP--IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 138
Query: 177 RDIKPANVLINEKME---HPCGYSCLYESGEARHRKHG------------GYNGFA--AD 219
RD++ AN+L+++ + G + L E E R+ Y F +D
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 198
Query: 220 IWSFGVTMMEL-------YMGY------------YPFLEPGQEPDFLSLMLAICFREPPS 260
+WSFG+ + E+ Y G Y + P P+ L ++ +C++E P
Sbjct: 199 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERP- 257
Query: 261 LPECSSEKFRDFIRCCLQ 278
D++R L+
Sbjct: 258 ----EDRPTFDYLRSVLE 271
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 113/258 (43%), Gaps = 45/258 (17%)
Query: 59 LEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCH 118
L+ ++ LG G G V+ + + + Q E N+++Q +V+ +
Sbjct: 25 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 84
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRG--RLSEDIICTISRQVLKGLFYMHSRNIVH 176
+ T+ + I+ EYM+ GSL ++K+ +L+ + + ++ Q+ +G+ ++ RN +H
Sbjct: 85 AVVTQEP--IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 142
Query: 177 RDIKPANVLINEKME---HPCGYSCLYESGEARHRKHG------------GYNGFA--AD 219
RD++ AN+L+++ + G + L E E R+ Y F +D
Sbjct: 143 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 202
Query: 220 IWSFGVTMMEL-------YMGY------------YPFLEPGQEPDFLSLMLAICFREPPS 260
+WSFG+ + E+ Y G Y + P P+ L ++ +C++E P
Sbjct: 203 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERP- 261
Query: 261 LPECSSEKFRDFIRCCLQ 278
D++R L+
Sbjct: 262 ----EDRPTFDYLRSVLE 275
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 89 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 146
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 147 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMTG 200
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 201 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 258
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 259 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 318
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 319 AQALAHAYFA 328
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 127
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMTG 181
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 239
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 240 GTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 300 AQALAHAYFA 309
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 133
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 134 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMTG 187
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 245
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 246 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 305
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 306 AQALAHAYFA 315
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 129
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE E + + G ARH G
Sbjct: 130 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELK-----ILDFGLARHTD-DEMTG 183
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 184 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 241
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 242 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 301
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 302 AQALAHAYFA 311
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 113/258 (43%), Gaps = 45/258 (17%)
Query: 59 LEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCH 118
L+ ++ LG G G V+ + + + Q E N+++Q +V+ +
Sbjct: 20 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 79
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRG--RLSEDIICTISRQVLKGLFYMHSRNIVH 176
+ T+ + I+ EYM+ GSL ++K+ +L+ + + ++ Q+ +G+ ++ RN +H
Sbjct: 80 AVVTQEP--IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 137
Query: 177 RDIKPANVLINEKME---HPCGYSCLYESGEARHRKHG------------GYNGFA--AD 219
RD++ AN+L+++ + G + L E E R+ Y F +D
Sbjct: 138 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 197
Query: 220 IWSFGVTMMEL-------YMGY------------YPFLEPGQEPDFLSLMLAICFREPPS 260
+WSFG+ + E+ Y G Y + P P+ L ++ +C++E P
Sbjct: 198 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERP- 256
Query: 261 LPECSSEKFRDFIRCCLQ 278
D++R L+
Sbjct: 257 ----EDRPTFDYLRSVLE 270
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 133
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 134 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMTG 187
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 245
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 246 GTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 305
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 306 AQALAHAYFA 315
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 134
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 135 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTA-DEMTG 188
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 246
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 247 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 306
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 307 AQALAHAYFA 316
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 93 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 150
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 151 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMTG 204
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 205 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 262
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 263 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 322
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 323 AQALAHAYFA 332
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 133
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE E + + G ARH G
Sbjct: 134 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELK-----ILDFGLARHTD-DEMTG 187
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 245
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 246 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 305
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 306 AQALAHAYFA 315
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 129
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 130 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMTG 183
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 184 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 241
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 242 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 301
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 302 AQALAHAYFA 311
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 81 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 138
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 139 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMTG 192
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 193 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 250
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 251 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 310
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 311 AQALAHAYFA 320
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 127
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMTG 181
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 239
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 300 AQALAHAYFA 309
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 108/252 (42%), Gaps = 26/252 (10%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVM---QCDRGTPPNP--QELNILRQTNSPYIVKCHQ 119
LG+G G V+ R K++ + ALKV+ Q ++ + +E+ I + P I++ +
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 120 IFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDI 179
F + +++EY G L ++ E TI ++ L Y H + ++HRDI
Sbjct: 91 YFYD-RRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKKVIHRDI 149
Query: 180 KPANVLINEKMEHPCGYSCLYESGEARHRK--------------HGGYNGFAADIWSFGV 225
KP N+L+ K E + RK G + D+W GV
Sbjct: 150 KPENLLLGLKGELKIADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGV 209
Query: 226 TMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKR 285
EL +G PF E + ++ + + P S+P + + +R +PS+R
Sbjct: 210 LCYELLVGNPPF-ESASHNETYRRIVKVDLKFPASVPTGAQDLISKLLR-----HNPSER 263
Query: 286 WTASQLLSHPFL 297
+Q+ +HP++
Sbjct: 264 LPLAQVSAHPWV 275
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 127
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMTG 181
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 239
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 300 AQALAHAYFA 309
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 80 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 137
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 138 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMTG 191
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 192 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 249
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 250 GTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 309
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 310 AQALAHAYFA 319
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 134
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 135 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMTG 188
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 246
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 247 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 306
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 307 AQALAHAYFA 316
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 139
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 140 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMTG 193
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 194 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 251
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 252 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 311
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 312 AQALAHAYFA 321
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 139
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 140 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMTG 193
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 194 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 251
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 252 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 311
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 312 AQALAHAYFA 321
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 132
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 133 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMTG 186
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 187 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 244
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 245 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 304
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 305 AQALAHAYFA 314
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 139
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 140 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMTG 193
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 194 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 251
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 252 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 311
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 312 AQALAHAYFA 321
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 69 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 126
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 127 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMTG 180
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 181 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 238
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 239 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 298
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 299 AQALAHAYFA 308
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 127
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMTG 181
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 239
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 300 AQALAHAYFA 309
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 129
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 130 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMTG 183
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 184 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 241
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 242 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 301
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 302 AQALAHAYFA 311
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 113/258 (43%), Gaps = 45/258 (17%)
Query: 59 LEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCH 118
L+ ++ LG G G V+ + + + Q E N+++Q +V+ +
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRG--RLSEDIICTISRQVLKGLFYMHSRNIVH 176
+ T+ + I+ EYM+ GSL ++K+ +L+ + + ++ Q+ +G+ ++ RN +H
Sbjct: 75 AVVTQEP--IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 132
Query: 177 RDIKPANVLINEKME---HPCGYSCLYESGEARHRKHG------------GYNGFA--AD 219
RD++ AN+L+++ + G + L E E R+ Y F +D
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 220 IWSFGVTMMEL-------YMGY------------YPFLEPGQEPDFLSLMLAICFREPPS 260
+WSFG+ + E+ Y G Y + P P+ L ++ +C++E P
Sbjct: 193 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERP- 251
Query: 261 LPECSSEKFRDFIRCCLQ 278
D++R L+
Sbjct: 252 ----EDRPTFDYLRSVLE 265
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 127
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMTG 181
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 239
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 300 AQALAHAYFA 309
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 129
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 130 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMTG 183
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 184 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 241
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 242 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 301
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 302 AQALAHAYFA 311
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 134
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 135 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTA-DEMTG 188
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 246
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 247 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 306
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 307 AQALAHAYFA 316
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 147
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 148 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMTG 201
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 202 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 259
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 260 GTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 319
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 320 AQALAHAYFA 329
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 134
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 135 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTA-DEMTG 188
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 246
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 247 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 306
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 307 AQALAHAYFA 316
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 68 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 125
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 126 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMTG 179
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 180 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 237
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 238 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 297
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 298 AQALAHAYFA 307
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 123
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 124 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMTG 177
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 178 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 235
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 236 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 295
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 296 AQALAHAYFA 305
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 132
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 133 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMTG 186
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 187 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 244
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 245 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 304
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 305 AQALAHAYFA 314
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 127
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMTG 181
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 239
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 300 AQALAHAYFA 309
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 67 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 124
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 125 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMTG 178
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 179 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 236
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 237 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 296
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 297 AQALAHAYFA 306
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 113/258 (43%), Gaps = 45/258 (17%)
Query: 59 LEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCH 118
L+ ++ LG G G V+ + + + Q E N+++Q +V+ +
Sbjct: 10 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 69
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRG--RLSEDIICTISRQVLKGLFYMHSRNIVH 176
+ T+ + I+ EYM+ GSL ++K+ +L+ + + ++ Q+ +G+ ++ RN +H
Sbjct: 70 AVVTQEP--IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 127
Query: 177 RDIKPANVLINEKME---HPCGYSCLYESGEARHRKHG------------GYNGFA--AD 219
RD++ AN+L+++ + G + L E E R+ Y F +D
Sbjct: 128 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 187
Query: 220 IWSFGVTMMEL-------YMGY------------YPFLEPGQEPDFLSLMLAICFREPPS 260
+WSFG+ + E+ Y G Y + P P+ L ++ +C++E P
Sbjct: 188 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERP- 246
Query: 261 LPECSSEKFRDFIRCCLQ 278
D++R L+
Sbjct: 247 ----EDRPTFDYLRSVLE 260
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 67 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 124
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 125 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMTG 178
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 179 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 236
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 237 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 296
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 297 AQALAHAYFA 306
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 105/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK +L++D +
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKC-AKLTDDHV 123
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 124 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMTG 177
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 178 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 235
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 236 GTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 295
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 296 AQALAHAYFA 305
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 107/243 (44%), Gaps = 31/243 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQ-CDRGTPPNPQELNILRQTNSPYIVKCHQIFTK 123
LG G G V+ + + + A+K M+ E N+++ +VK H + TK
Sbjct: 23 LGAGQFGEVWMATYNKHTKV-AVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 81
Query: 124 PSGEVSILMEYMDAGSLEIYVKSRGRLSEDI--ICTISRQVLKGLFYMHSRNIVHRDIKP 181
+ I+ E+M GSL ++KS + + + S Q+ +G+ ++ RN +HRD++
Sbjct: 82 EP--IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRA 139
Query: 182 ANVLINEKME---HPCGYSCLYESGEARHRKHG--------------GYNGFAADIWSFG 224
AN+L++ + G + + E E R+ G +D+WSFG
Sbjct: 140 ANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFG 199
Query: 225 VTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPE-CSSEKFRDFIRCCLQKGDP 282
+ +ME+ G P+ PG + L +R P PE C E + +RC K P
Sbjct: 200 ILLMEIVTYGRIPY--PGMSNPEVIRALERGYRMP--RPENCPEELYNIMMRCW--KNRP 253
Query: 283 SKR 285
+R
Sbjct: 254 EER 256
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 118/258 (45%), Gaps = 40/258 (15%)
Query: 49 YGQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQ------TLALYALKVMQCDRGTPPNPQE 102
+ +E+D + + +V+G G G V R K ++A+ LKV ++ E
Sbjct: 38 FAKELDA-TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 103 LNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQ 161
+I+ Q + P I++ + TK S V I+ EYM+ GSL+ ++ K + + + + R
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTK-SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 162 VLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS------CLYESGEARHRKHGG--- 212
+ G+ Y+ VHRD+ N+LIN + C S L + EA + GG
Sbjct: 156 IASGMKYLSDMGFVHRDLAARNILINSNL--VCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 213 ----------YNGF--AADIWSFGVTMME-LYMGYYPFLEPGQEPDFLSLMLAI--CFRE 257
Y F A+D+WS+G+ + E + G P+ E + ++ A+ +R
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAVDEGYRL 269
Query: 258 PPSLPECSSEKFRDFIRC 275
PP + +C + ++ + C
Sbjct: 270 PPPM-DCPAALYQLMLDC 286
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 88/211 (41%), Gaps = 34/211 (16%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQE-----LNILRQTNSPYIVKCHQ 119
LG G G V + H+ T A+K QC + P +E + I+++ N P +V +
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIK--QCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 80
Query: 120 I-----FTKPSGEVSILMEYMDAGSLEIYVKSRGR---LSEDIICTISRQVLKGLFYMHS 171
+ P+ + MEY + G L Y+ L E I T+ + L Y+H
Sbjct: 81 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 140
Query: 172 RNIVHRDIKPANVLIN---EKMEHPC---GYSCLYESGEARHRKHGGYNGFA-------- 217
I+HRD+KP N+++ +++ H GY+ + GE G A
Sbjct: 141 NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKK 200
Query: 218 ----ADIWSFGVTMMELYMGYYPFLEPGQEP 244
D WSFG E G+ PFL P +P
Sbjct: 201 YTVTVDYWSFGTLAFECITGFRPFL-PNWQP 230
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 88/211 (41%), Gaps = 34/211 (16%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQE-----LNILRQTNSPYIVKCHQ 119
LG G G V + H+ T A+K QC + P +E + I+++ N P +V +
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIK--QCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 79
Query: 120 I-----FTKPSGEVSILMEYMDAGSLEIYVKSRGR---LSEDIICTISRQVLKGLFYMHS 171
+ P+ + MEY + G L Y+ L E I T+ + L Y+H
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 139
Query: 172 RNIVHRDIKPANVLIN---EKMEHPC---GYSCLYESGEARHRKHGGYNGFA-------- 217
I+HRD+KP N+++ +++ H GY+ + GE G A
Sbjct: 140 NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKK 199
Query: 218 ----ADIWSFGVTMMELYMGYYPFLEPGQEP 244
D WSFG E G+ PFL P +P
Sbjct: 200 YTVTVDYWSFGTLAFECITGFRPFL-PNWQP 229
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 123
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 124 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMTG 177
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 178 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 235
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 236 GTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 295
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 296 AQALAHAYFA 305
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 62/250 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 93 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 150
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH G
Sbjct: 151 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTD-DEMXG 204
Query: 216 FAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAIC 254
+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 205 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLV 262
Query: 255 FREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTA 288
L + SSE R++I+ Q D KR TA
Sbjct: 263 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 322
Query: 289 SQLLSHPFLA 298
+Q L+H + A
Sbjct: 323 AQALAHAYFA 332
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 74/135 (54%), Gaps = 6/135 (4%)
Query: 61 KLQVLGQGNGGTVFKVRHKQTLALYALKVMQCD--RGTPPNP-QELNILRQTNSPYIVKC 117
KL LG+G TV+K + K T L ALK ++ + G P +E+++L+ IV
Sbjct: 6 KLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTL 65
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRL-SEDIICTISRQVLKGLFYMHSRNIVH 176
H I ++++ EY+D L+ Y+ G + + + Q+L+GL Y H + ++H
Sbjct: 66 HDII-HTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLH 123
Query: 177 RDIKPANVLINEKME 191
RD+KP N+LINE+ E
Sbjct: 124 RDLKPQNLLINERGE 138
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 107/243 (44%), Gaps = 31/243 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQ-CDRGTPPNPQELNILRQTNSPYIVKCHQIFTK 123
LG G G V+ + + + A+K M+ E N+++ +VK H + TK
Sbjct: 196 LGAGQFGEVWMATYNKHTKV-AVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 254
Query: 124 PSGEVSILMEYMDAGSLEIYVKSRGRLSEDI--ICTISRQVLKGLFYMHSRNIVHRDIKP 181
+ I+ E+M GSL ++KS + + + S Q+ +G+ ++ RN +HRD++
Sbjct: 255 EP--IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRA 312
Query: 182 ANVLINEKME---HPCGYSCLYESGEARHRKHG--------------GYNGFAADIWSFG 224
AN+L++ + G + + E E R+ G +D+WSFG
Sbjct: 313 ANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFG 372
Query: 225 VTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPE-CSSEKFRDFIRCCLQKGDP 282
+ +ME+ G P+ PG + L +R P PE C E + +RC K P
Sbjct: 373 ILLMEIVTYGRIPY--PGMSNPEVIRALERGYRMP--RPENCPEELYNIMMRCW--KNRP 426
Query: 283 SKR 285
+R
Sbjct: 427 EER 429
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 104/249 (41%), Gaps = 60/249 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 147
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH
Sbjct: 148 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTDDEMXGX 202
Query: 216 FAA-------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAICF 255
A DIWS G M EL G F PG + D L L+L +
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLVG 260
Query: 256 REPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTAS 289
L + SSE R++I+ Q D KR TA+
Sbjct: 261 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 320
Query: 290 QLLSHPFLA 298
Q L+H + A
Sbjct: 321 QALAHAYFA 329
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 119/294 (40%), Gaps = 59/294 (20%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALK-VMQCDRGTPPNP---QELNILRQTNS 111
+ + E L ++G+G+ G V K R+K T + A+K ++ D +E+ +L+Q
Sbjct: 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRH 83
Query: 112 PYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHS 171
+V ++ K ++ E++D L+ L ++ Q++ G+ + HS
Sbjct: 84 ENLVNLLEV-CKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHS 142
Query: 172 RNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGG--YN--------------- 214
NI+HRDIKP N+L+++ G L + G AR G Y+
Sbjct: 143 HNIIHRDIKPENILVSQS-----GVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLV 197
Query: 215 -----GFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAI---------CFREPP- 259
G A D+W+ G + E++MG F +M+ + F + P
Sbjct: 198 GDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPV 257
Query: 260 ----SLPECS------------SEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297
LPE SE D + CL DP KR ++LL H F
Sbjct: 258 FAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHI-DPDKRPFCAELLHHDFF 310
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 104/233 (44%), Gaps = 21/233 (9%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQ-CDRGTPPNPQELNILRQTNSPYIVKCHQIFTK 123
LG G G V+ + + + A+K M+ E N+++ +VK H + TK
Sbjct: 190 LGAGQFGEVWMATYNKHTKV-AVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 248
Query: 124 PSGEVSILMEYMDAGSLEIYVKSRGRLSEDI--ICTISRQVLKGLFYMHSRNIVHRDIKP 181
+ I+ E+M GSL ++KS + + + S Q+ +G+ ++ RN +HRD++
Sbjct: 249 EP--IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRA 306
Query: 182 ANVLINEKMEHPCGYSCLYESG-------EARHRKHGGYNGFAADIWSFGVTMMELYM-G 233
AN+L++ + L G A + G +D+WSFG+ +ME+ G
Sbjct: 307 ANILVSASLVCKIADFGLARVGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYG 366
Query: 234 YYPFLEPGQEPDFLSLMLAICFREPPSLPE-CSSEKFRDFIRCCLQKGDPSKR 285
P+ PG + L +R P PE C E + +RC K P +R
Sbjct: 367 RIPY--PGMSNPEVIRALERGYRMP--RPENCPEELYNIMMRCW--KNRPEER 413
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 78/147 (53%), Gaps = 15/147 (10%)
Query: 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALK--VMQCDR-GTPPNP-QELNILRQT 109
D +S+ EKL +GQG G VFK RH++T ALK +M+ ++ G P +E+ IL+
Sbjct: 14 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 73
Query: 110 NSPYIVKCHQI-------FTKPSGEVSILMEY--MDAGSLEIYVKSRGRLSEDIICTISR 160
+V +I + + G + ++ ++ D L V + LSE I + +
Sbjct: 74 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQ 131
Query: 161 QVLKGLFYMHSRNIVHRDIKPANVLIN 187
+L GL+Y+H I+HRD+K ANVLI
Sbjct: 132 MLLNGLYYIHRNKILHRDMKAANVLIT 158
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 113/250 (45%), Gaps = 36/250 (14%)
Query: 57 SQLEKLQVLGQGNGGTVFK---VRHKQTLAL-YALKVMQCDRGTPPNPQELN---ILRQT 109
++L K++VLG G GTV+K + + + + A+KV++ + N + L+ ++
Sbjct: 17 TELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGV 76
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVK-SRGRLSEDIICTISRQVLKGLFY 168
SPY+ + I + V ++ + M G L +V+ +RGRL + Q+ KG+ Y
Sbjct: 77 GSPYVSRLLGICL--TSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSY 134
Query: 169 MHSRNIVHRDIKPANVLI---NEKMEHPCGYSCLYESGEARHRKHGGYNGFA-------- 217
+ +VHRD+ NVL+ N G + L + E + GG
Sbjct: 135 LEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESIL 194
Query: 218 -------ADIWSFGVTMMELY-MGYYPFLE-PGQE-PDFLSLMLAICFREPPSLPECSSE 267
+D+WS+GVT+ EL G P+ P +E PD L + P P C+ +
Sbjct: 195 RRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERL-----PQPPICTID 249
Query: 268 KFRDFIRCCL 277
+ ++C +
Sbjct: 250 VYMIMVKCWM 259
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 78/147 (53%), Gaps = 15/147 (10%)
Query: 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALK--VMQCDR-GTPPNP-QELNILRQT 109
D +S+ EKL +GQG G VFK RH++T ALK +M+ ++ G P +E+ IL+
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 74
Query: 110 NSPYIVKCHQI-------FTKPSGEVSILMEY--MDAGSLEIYVKSRGRLSEDIICTISR 160
+V +I + + G + ++ ++ D L V + LSE I + +
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQ 132
Query: 161 QVLKGLFYMHSRNIVHRDIKPANVLIN 187
+L GL+Y+H I+HRD+K ANVLI
Sbjct: 133 MLLNGLYYIHRNKILHRDMKAANVLIT 159
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 127/276 (46%), Gaps = 42/276 (15%)
Query: 49 YGQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQ------TLALYALKVMQCDRGTPPNPQE 102
+ +E+D + + +V+G G G V R K ++A+ LKV ++ E
Sbjct: 38 FAKELDA-TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 103 LNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQ 161
+I+ Q + P I++ + TK S V I+ EYM+ GSL+ ++ K + + + + R
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTK-SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 162 VLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS------CLYESGEARHRKHGG--- 212
+ G+ Y+ VHRD+ N+LIN + C S L + EA + GG
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNL--VCKVSDFGLGRVLEDDPEAAYTTRGGKIP 213
Query: 213 ----------YNGF--AADIWSFGVTMME-LYMGYYPFLEPGQEPDFLSLMLAI--CFRE 257
Y F A+D+WS+G+ + E + G P+ E + ++ A+ +R
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAVDEGYRL 269
Query: 258 PPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLS 293
PP + +C + ++ + C QK D + R Q++S
Sbjct: 270 PPPM-DCPAALYQ-LMLDCWQK-DRNNRPKFEQIVS 302
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 118/258 (45%), Gaps = 40/258 (15%)
Query: 49 YGQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQ------TLALYALKVMQCDRGTPPNPQE 102
+ +E+D + + +V+G G G V R K ++A+ LKV ++ E
Sbjct: 38 FAKELDA-TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 103 LNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQ 161
+I+ Q + P I++ + TK S V I+ EYM+ GSL+ ++ K + + + + R
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTK-SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 162 VLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS------CLYESGEARHRKHGG--- 212
+ G+ Y+ VHRD+ N+LIN + C S L + EA + GG
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNL--VCKVSDFGLARVLEDDPEAAYTTRGGKIP 213
Query: 213 ----------YNGF--AADIWSFGVTMME-LYMGYYPFLEPGQEPDFLSLMLAI--CFRE 257
Y F A+D+WS+G+ + E + G P+ E + ++ A+ +R
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAVDEGYRL 269
Query: 258 PPSLPECSSEKFRDFIRC 275
PP + +C + ++ + C
Sbjct: 270 PPPM-DCPAALYQLMLDC 286
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 118/258 (45%), Gaps = 40/258 (15%)
Query: 49 YGQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQ------TLALYALKVMQCDRGTPPNPQE 102
+ +E+D + + +V+G G G V R K ++A+ LKV ++ E
Sbjct: 38 FAKELDA-TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 103 LNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQ 161
+I+ Q + P I++ + TK S V I+ EYM+ GSL+ ++ K + + + + R
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTK-SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 162 VLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS------CLYESGEARHRKHGG--- 212
+ G+ Y+ VHRD+ N+LIN + C S L + EA + GG
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNL--VCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 213 ----------YNGF--AADIWSFGVTMME-LYMGYYPFLEPGQEPDFLSLMLAI--CFRE 257
Y F A+D+WS+G+ + E + G P+ E + ++ A+ +R
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAVDEGYRL 269
Query: 258 PPSLPECSSEKFRDFIRC 275
PP + +C + ++ + C
Sbjct: 270 PPPM-DCPAALYQLMLDC 286
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 118/258 (45%), Gaps = 40/258 (15%)
Query: 49 YGQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQ------TLALYALKVMQCDRGTPPNPQE 102
+ +E+D + + +V+G G G V R K ++A+ LKV ++ E
Sbjct: 38 FAKELDA-TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 103 LNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQ 161
+I+ Q + P I++ + TK S V I+ EYM+ GSL+ ++ K + + + + R
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTK-SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 162 VLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS------CLYESGEARHRKHGG--- 212
+ G+ Y+ VHRD+ N+LIN + C S L + EA + GG
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNL--VCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 213 ----------YNGF--AADIWSFGVTMME-LYMGYYPFLEPGQEPDFLSLMLAI--CFRE 257
Y F A+D+WS+G+ + E + G P+ E + ++ A+ +R
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAVDEGYRL 269
Query: 258 PPSLPECSSEKFRDFIRC 275
PP + +C + ++ + C
Sbjct: 270 PPPM-DCPAALYQLMLDC 286
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 78/146 (53%), Gaps = 15/146 (10%)
Query: 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALK--VMQCDR-GTPPNP-QELNILRQT 109
D +S+ EKL +GQG G VFK RH++T ALK +M+ ++ G P +E+ IL+
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 74
Query: 110 NSPYIVKCHQI-------FTKPSGEVSILMEY--MDAGSLEIYVKSRGRLSEDIICTISR 160
+V +I + + G + ++ ++ D L V + LSE I + +
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQ 132
Query: 161 QVLKGLFYMHSRNIVHRDIKPANVLI 186
+L GL+Y+H I+HRD+K ANVLI
Sbjct: 133 MLLNGLYYIHRNKILHRDMKAANVLI 158
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 118/258 (45%), Gaps = 40/258 (15%)
Query: 49 YGQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQ------TLALYALKVMQCDRGTPPNPQE 102
+ +E+D + + +V+G G G V R K ++A+ LKV ++ E
Sbjct: 36 FAKELDA-TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 94
Query: 103 LNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQ 161
+I+ Q + P I++ + TK S V I+ EYM+ GSL+ ++ K + + + + R
Sbjct: 95 ASIMGQFDHPNIIRLEGVVTK-SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 153
Query: 162 VLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS------CLYESGEARHRKHGG--- 212
+ G+ Y+ VHRD+ N+LIN + C S L + EA + GG
Sbjct: 154 IASGMKYLSDMGYVHRDLAARNILINSNL--VCKVSDFGLSRVLEDDPEAAYTTRGGKIP 211
Query: 213 ----------YNGF--AADIWSFGVTMME-LYMGYYPFLEPGQEPDFLSLMLAI--CFRE 257
Y F A+D+WS+G+ + E + G P+ E + ++ A+ +R
Sbjct: 212 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAVDEGYRL 267
Query: 258 PPSLPECSSEKFRDFIRC 275
PP + +C + ++ + C
Sbjct: 268 PPPM-DCPAALYQLMLDC 284
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 118/258 (45%), Gaps = 40/258 (15%)
Query: 49 YGQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQ------TLALYALKVMQCDRGTPPNPQE 102
+ +E+D + + +V+G G G V R K ++A+ LKV ++ E
Sbjct: 38 FAKELDA-TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 103 LNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQ 161
+I+ Q + P I++ + TK S V I+ EYM+ GSL+ ++ K + + + + R
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTK-SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 162 VLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS------CLYESGEARHRKHGG--- 212
+ G+ Y+ VHRD+ N+LIN + C S L + EA + GG
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNL--VCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 213 ----------YNGF--AADIWSFGVTMME-LYMGYYPFLEPGQEPDFLSLMLAI--CFRE 257
Y F A+D+WS+G+ + E + G P+ E + ++ A+ +R
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAVDEGYRL 269
Query: 258 PPSLPECSSEKFRDFIRC 275
PP + +C + ++ + C
Sbjct: 270 PPPM-DCPAALYQLMLDC 286
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 112/252 (44%), Gaps = 29/252 (11%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQT------ 109
+ E ++LG+G+ G VF K+T +A+K ++ D + E ++ +
Sbjct: 17 IEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 76
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
P++ F + +MEY++ G L +++S + + +++ GL ++
Sbjct: 77 EHPFLTHMFCTFQTKEN-LFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFL 135
Query: 170 HSRNIVHRDIKPANVLINEKME-HPCGYSCLYES--GEARHRKHGGYNGFAA-------- 218
HS+ IV+RD+K N+L+++ + E+ G+A+ + G + A
Sbjct: 136 HSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQK 195
Query: 219 -----DIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFI 273
D WSFGV + E+ +G PF +E F S+ + + P P ++ +D +
Sbjct: 196 YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRM-----DNPFYPRWLEKEAKDLL 250
Query: 274 RCCLQKGDPSKR 285
+ +P KR
Sbjct: 251 VKLFVR-EPEKR 261
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 118/258 (45%), Gaps = 40/258 (15%)
Query: 49 YGQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQ------TLALYALKVMQCDRGTPPNPQE 102
+ +E+D + + +V+G G G V R K ++A+ LKV ++ E
Sbjct: 9 FAKELDA-TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 67
Query: 103 LNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQ 161
+I+ Q + P I++ + TK S V I+ EYM+ GSL+ ++ K + + + + R
Sbjct: 68 ASIMGQFDHPNIIRLEGVVTK-SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 126
Query: 162 VLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS------CLYESGEARHRKHGG--- 212
+ G+ Y+ VHRD+ N+LIN + C S L + EA + GG
Sbjct: 127 IASGMKYLSDMGYVHRDLAARNILINSNL--VCKVSDFGLSRVLEDDPEAAYTTRGGKIP 184
Query: 213 ----------YNGF--AADIWSFGVTMME-LYMGYYPFLEPGQEPDFLSLMLAI--CFRE 257
Y F A+D+WS+G+ + E + G P+ E + ++ A+ +R
Sbjct: 185 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAVDEGYRL 240
Query: 258 PPSLPECSSEKFRDFIRC 275
PP + +C + ++ + C
Sbjct: 241 PPPM-DCPAALYQLMLDC 257
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 118/258 (45%), Gaps = 40/258 (15%)
Query: 49 YGQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQ------TLALYALKVMQCDRGTPPNPQE 102
+ +E+D + + +V+G G G V R K ++A+ LKV ++ E
Sbjct: 38 FAKELDA-TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 103 LNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQ 161
+I+ Q + P I++ + TK S V I+ EYM+ GSL+ ++ K + + + + R
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTK-SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 162 VLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS------CLYESGEARHRKHGG--- 212
+ G+ Y+ VHRD+ N+LIN + C S L + EA + GG
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNL--VCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 213 ----------YNGF--AADIWSFGVTMME-LYMGYYPFLEPGQEPDFLSLMLAI--CFRE 257
Y F A+D+WS+G+ + E + G P+ E + ++ A+ +R
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAVDEGYRL 269
Query: 258 PPSLPECSSEKFRDFIRC 275
PP + +C + ++ + C
Sbjct: 270 PPPM-DCPAALYQLMLDC 286
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 104/249 (41%), Gaps = 60/249 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 127
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG 215
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTDDEMTGX 182
Query: 216 FA-------------------ADIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAICF 255
A DIWS G M EL G F PG + D L L+L +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLVG 240
Query: 256 REPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTAS 289
L + SSE R++I+ Q D KR TA+
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 290 QLLSHPFLA 298
Q L+H + A
Sbjct: 301 QALAHAYFA 309
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 118/258 (45%), Gaps = 40/258 (15%)
Query: 49 YGQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQ------TLALYALKVMQCDRGTPPNPQE 102
+ +E+D + + +V+G G G V R K ++A+ LKV ++ E
Sbjct: 26 FAKELDA-TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 84
Query: 103 LNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQ 161
+I+ Q + P I++ + TK S V I+ EYM+ GSL+ ++ K + + + + R
Sbjct: 85 ASIMGQFDHPNIIRLEGVVTK-SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 143
Query: 162 VLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS------CLYESGEARHRKHGG--- 212
+ G+ Y+ VHRD+ N+LIN + C S L + EA + GG
Sbjct: 144 IASGMKYLSDMGYVHRDLAARNILINSNL--VCKVSDFGLSRVLEDDPEAAYTTRGGKIP 201
Query: 213 ----------YNGF--AADIWSFGVTMME-LYMGYYPFLEPGQEPDFLSLMLAI--CFRE 257
Y F A+D+WS+G+ + E + G P+ E + ++ A+ +R
Sbjct: 202 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAVDEGYRL 257
Query: 258 PPSLPECSSEKFRDFIRC 275
PP + +C + ++ + C
Sbjct: 258 PPPM-DCPAALYQLMLDC 274
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 106/251 (42%), Gaps = 64/251 (25%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 127
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKME-HPCGYSCLYESGEARHRKHGGYN 214
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE E G+ G ARH
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGF------GLARHTD-DEMT 180
Query: 215 GFAA--------------------DIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAI 253
G+ A DIWS G M EL G F PG + D L L+L +
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRL 238
Query: 254 CFREPPS-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWT 287
L + SSE R++I+ Q D KR T
Sbjct: 239 VGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 298
Query: 288 ASQLLSHPFLA 298
A+Q L+H + A
Sbjct: 299 AAQALAHAYFA 309
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 28/200 (14%)
Query: 59 LEKLQVLGQGNGGTVFKVRHK-------QTLALYALKVMQCDRGTPPNPQELNILRQTNS 111
L++++ LG+G+ G V R+ + +A+ +LK +E+ ILR
Sbjct: 23 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYH 82
Query: 112 PYIVKCHQIFTKPSGE-VSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQVLKGLFYM 169
IVK I T+ G + ++ME++ +GSL+ Y+ K++ +++ + Q+ KG+ Y+
Sbjct: 83 ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL 142
Query: 170 HSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG-------------- 215
SR VHRD+ NVL+ + + G L ++ E +
Sbjct: 143 GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 202
Query: 216 -----FAADIWSFGVTMMEL 230
A+D+WSFGVT+ EL
Sbjct: 203 QSKFYIASDVWSFGVTLHEL 222
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 28/200 (14%)
Query: 59 LEKLQVLGQGNGGTVFKVRHK-------QTLALYALKVMQCDRGTPPNPQELNILRQTNS 111
L++++ LG+G+ G V R+ + +A+ +LK +E+ ILR
Sbjct: 11 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYH 70
Query: 112 PYIVKCHQIFTKPSGE-VSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQVLKGLFYM 169
IVK I T+ G + ++ME++ +GSL+ Y+ K++ +++ + Q+ KG+ Y+
Sbjct: 71 ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL 130
Query: 170 HSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG-------------- 215
SR VHRD+ NVL+ + + G L ++ E +
Sbjct: 131 GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 190
Query: 216 -----FAADIWSFGVTMMEL 230
A+D+WSFGVT+ EL
Sbjct: 191 QSKFYIASDVWSFGVTLHEL 210
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 94/204 (46%), Gaps = 37/204 (18%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ-------ELNILRQTNSPYIV 115
Q +G G+ GTV+K + +A+ L V T P PQ E+ +LR+T I+
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNV------TAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 116 KCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDI-ICTISRQVLKGLFYMHSRNI 174
T P +++I+ ++ + SL ++ E I + I+RQ +G+ Y+H+++I
Sbjct: 68 LFMGYSTAP--QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 125
Query: 175 VHRDIKPANVLINEKMEHPCGY---------------------SCLYESGEARHRKHGGY 213
+HRD+K N+ ++E + G S L+ + E +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 214 NGFAADIWSFGVTMMELYMGYYPF 237
F +D+++FG+ + EL G P+
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 112/249 (44%), Gaps = 40/249 (16%)
Query: 63 QVLGQGNGGTVFKVRHKQT-------LALYALKVMQCDRGTPPNPQELNILRQTNSPYIV 115
+V+G G G V+K K + +A+ LK ++ E I+ Q + I+
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 116 KCHQIFTKPSGEVSILMEYMDAGSLEIYVKSR-GRLSEDIICTISRQVLKGLFYMHSRNI 174
+ + +K + I+ EYM+ G+L+ +++ + G S + + R + G+ Y+ + N
Sbjct: 110 RLEGVISKYK-PMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNY 168
Query: 175 VHRDIKPANVLINEKMEHPCGYS------CLYESGEARHRKHGG-------------YNG 215
VHRD+ N+L+N + C S L + EA + GG Y
Sbjct: 169 VHRDLAARNILVNSNL--VCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRK 226
Query: 216 F--AADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAI--CFREPPSLPECSSEKFR 270
F A+D+WSFG+ M E+ G P+ E +M AI FR P + +C S ++
Sbjct: 227 FTSASDVWSFGIVMWEVMTYGERPYWELSNH----EVMKAINDGFRLPTPM-DCPSAIYQ 281
Query: 271 DFIRCCLQK 279
++C Q+
Sbjct: 282 LMMQCWQQE 290
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 23/197 (11%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ-----ELNILRQTNSPYIVK 116
++ LG+G+ G V H T ALK++ + Q E++ LR P+I+K
Sbjct: 9 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 68
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVH 176
+ + K E+ +++EY L Y+ R ++SE +Q++ + Y H IVH
Sbjct: 69 LYDVI-KSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVH 126
Query: 177 RDIKPANVLINEKMEHPC---GYSCLYESGEARHRKHGG-------------YNGFAADI 220
RD+KP N+L++E + G S + G G Y G D+
Sbjct: 127 RDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDV 186
Query: 221 WSFGVTMMELYMGYYPF 237
WS GV + + PF
Sbjct: 187 WSCGVILYVMLCRRLPF 203
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 32/206 (15%)
Query: 63 QVLGQGNGGTV----FKVRHKQTL--ALYALKVMQCDRGTPPNPQELNILRQTNSPYIVK 116
+V+G G G V K+ K+ L A+ LKV ++ E +I+ Q + P I+
Sbjct: 28 RVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIH 87
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVK-SRGRLSEDIICTISRQVLKGLFYMHSRNIV 175
+ TK S V I+ EYM+ GSL+ ++K + G+ + + + R + G+ Y+ V
Sbjct: 88 LEGVVTK-SKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYV 146
Query: 176 HRDIKPANVLINEKMEHPCGYS------CLYESGEARHRKHGG-------------YNGF 216
HRD+ N+LIN + C S L + EA + GG + F
Sbjct: 147 HRDLAARNILINSNL--VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKF 204
Query: 217 --AADIWSFGVTMMELY-MGYYPFLE 239
A+D+WS+G+ M E+ G P+ E
Sbjct: 205 TSASDVWSYGIVMWEVVSYGERPYWE 230
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 23/197 (11%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ-----ELNILRQTNSPYIVK 116
++ LG+G+ G V H T ALK++ + Q E++ LR P+I+K
Sbjct: 13 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 72
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVH 176
+ + K E+ +++EY L Y+ R ++SE +Q++ + Y H IVH
Sbjct: 73 LYDVI-KSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVH 130
Query: 177 RDIKPANVLINEKMEHPC---GYSCLYESGEARHRKHGG-------------YNGFAADI 220
RD+KP N+L++E + G S + G G Y G D+
Sbjct: 131 RDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDV 190
Query: 221 WSFGVTMMELYMGYYPF 237
WS GV + + PF
Sbjct: 191 WSCGVILYVMLCRRLPF 207
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 23/197 (11%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ-----ELNILRQTNSPYIVK 116
++ LG+G+ G V H T ALK++ + Q E++ LR P+I+K
Sbjct: 19 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 78
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVH 176
+ + K E+ +++EY L Y+ R ++SE +Q++ + Y H IVH
Sbjct: 79 LYDVI-KSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVH 136
Query: 177 RDIKPANVLINEKMEHPC---GYSCLYESGEARHRKHGG-------------YNGFAADI 220
RD+KP N+L++E + G S + G G Y G D+
Sbjct: 137 RDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDV 196
Query: 221 WSFGVTMMELYMGYYPF 237
WS GV + + PF
Sbjct: 197 WSCGVILYVMLCRRLPF 213
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 111/261 (42%), Gaps = 34/261 (13%)
Query: 46 AASYGQEIDGL-----SQLEKLQVLGQGNGGTV---FKVRHKQTLALYAL-KVMQCDRGT 96
A Y QE++ +L+ L+ +G G G+V + R +Q +A+ L + Q
Sbjct: 12 AGFYRQELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHA 71
Query: 97 PPNPQELNILRQTNSPYIVKCHQIFTKPSG-----EVSILMEYMDAGSLEIYVKSRGRLS 151
+EL +L+ ++ +FT + EV ++ M A L VK + LS
Sbjct: 72 RRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGA-DLNNIVKCQA-LS 129
Query: 152 EDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHG 211
++ + + Q+L+GL Y+HS I+HRD+KP+NV +NE E L + +
Sbjct: 130 DEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYV 189
Query: 212 GYNGFAA--------------DIWSFGVTMMELYMGYYPFLEPGQE--PDFLSLMLAICF 255
+ A DIWS G M EL G F PG + +M +
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALF--PGSDYIDQLKRIMEVVGT 247
Query: 256 REPPSLPECSSEKFRDFIRCC 276
P L + SSE R +I+
Sbjct: 248 PSPEVLAKISSEHARTYIQSL 268
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 109/245 (44%), Gaps = 29/245 (11%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQT------NSPYIVK 116
++LG+G+ G VF K+T +A+K ++ D + E ++ + P++
Sbjct: 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 82
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVH 176
F + +MEY++ G L +++S + + +++ GL ++HS+ IV+
Sbjct: 83 MFCTFQTKEN-LFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVY 141
Query: 177 RDIKPANVLINEKME-HPCGYSCLYES--GEARHRKHGGYNGFAA-------------DI 220
RD+K N+L+++ + E+ G+A+ G + A D
Sbjct: 142 RDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDW 201
Query: 221 WSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKG 280
WSFGV + E+ +G PF +E F S+ + + P P ++ +D + +
Sbjct: 202 WSFGVLLYEMLIGQSPFHGQDEEELFHSIRM-----DNPFYPRWLEKEAKDLLVKLFVR- 255
Query: 281 DPSKR 285
+P KR
Sbjct: 256 EPEKR 260
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 113/258 (43%), Gaps = 45/258 (17%)
Query: 59 LEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCH 118
L+ ++ LG G G V+ + + + Q E N+++Q +V+ +
Sbjct: 11 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 70
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRG--RLSEDIICTISRQVLKGLFYMHSRNIVH 176
+ T+ + I+ EYM+ GSL ++K+ +L+ + + ++ Q+ +G+ ++ RN +H
Sbjct: 71 AVVTQEP--IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 128
Query: 177 RDIKPANVLINEKME---HPCGYSCLYESGEARHRKHG------------GYNGFA--AD 219
R+++ AN+L+++ + G + L E E R+ Y F +D
Sbjct: 129 RNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 188
Query: 220 IWSFGVTMMEL-------YMGY------------YPFLEPGQEPDFLSLMLAICFREPPS 260
+WSFG+ + E+ Y G Y + P P+ L ++ +C++E P
Sbjct: 189 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERP- 247
Query: 261 LPECSSEKFRDFIRCCLQ 278
D++R L+
Sbjct: 248 ----EDRPTFDYLRSVLE 261
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 100/245 (40%), Gaps = 52/245 (21%)
Query: 101 QELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISR 160
EL I+ + Y + C I T EV I+ EYM+ S+ + + L ++ C I
Sbjct: 92 NELQIITDIKNEYCLTCEGIITN-YDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPI 150
Query: 161 QVLKGLF--------YMHS-RNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH---- 207
QV+K + Y+H+ +NI HRD+KP+N+L+++ G L + GE+ +
Sbjct: 151 QVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKN-----GRVKLSDFGESEYMVDK 205
Query: 208 -----------------RKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLM 250
YNG DIWS G+ + ++ PF + + +
Sbjct: 206 KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNI 265
Query: 251 LAICFREP-----------PSLPECS----SEKFRDFIRCCLQKGDPSKRWTASQLLSHP 295
P CS S + DF++ L+K P++R T+ L H
Sbjct: 266 RTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKN-PAERITSEDALKHE 324
Query: 296 FLADA 300
+LAD
Sbjct: 325 WLADT 329
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 111/241 (46%), Gaps = 38/241 (15%)
Query: 86 ALKVMQCDR----GTPPN----PQELNILRQTNSPY--IVKCHQIFTKPSGEVSILMEYM 135
A+K ++ DR G PN P E+ +L++ +S + +++ F +P V IL
Sbjct: 80 AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 139
Query: 136 DAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLIN------EK 189
L ++ RG L E++ + QVL+ + + H+ ++HRDIK N+LI+ +
Sbjct: 140 PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 199
Query: 190 MEHPCGY---SCLYESGEARHR-------KHGGYNGFAADIWSFGVTMMELYMGYYPFLE 239
++ G +Y + ++ Y+G +A +WS G+ + ++ G PF
Sbjct: 200 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-- 257
Query: 240 PGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299
E D + + FR+ S EC + IR CL PS R T ++ +HP++ D
Sbjct: 258 ---EHDEEIIRGQVFFRQRVS-SEC-----QHLIRWCLALR-PSDRPTFEEIQNHPWMQD 307
Query: 300 A 300
Sbjct: 308 V 308
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 23/197 (11%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ-----ELNILRQTNSPYIVK 116
++ LG+G+ G V H T ALK++ + Q E++ LR P+I+K
Sbjct: 18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 77
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVH 176
+ + K E+ +++EY L Y+ R ++SE +Q++ + Y H IVH
Sbjct: 78 LYDVI-KSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVH 135
Query: 177 RDIKPANVLINEKMEHPC---GYSCLYESGEARHRKHGG-------------YNGFAADI 220
RD+KP N+L++E + G S + G G Y G D+
Sbjct: 136 RDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDV 195
Query: 221 WSFGVTMMELYMGYYPF 237
WS GV + + PF
Sbjct: 196 WSCGVILYVMLCRRLPF 212
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 99/200 (49%), Gaps = 30/200 (15%)
Query: 59 LEKLQVLGQGNGGTV----FKVRHKQTLALYALKVMQCDRGTPPNP---QELNILRQTNS 111
L+K++ LG+G+ G V + + T + A+K ++ D G QE++ILR
Sbjct: 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYH 92
Query: 112 PYIVKCHQIFTKPSGEVSI--LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
+I+K ++ + +G S+ +MEY+ GSL Y+ R + + ++Q+ +G+ Y+
Sbjct: 93 EHIIK-YKGCCEDAGAASLQLVMEYVPLGSLRDYL-PRHSIGLAQLLLFAQQICEGMAYL 150
Query: 170 HSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHGGYNGF-------- 216
H+++ +HRD+ NVL++ G L ++ H R+ G F
Sbjct: 151 HAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLK 210
Query: 217 ------AADIWSFGVTMMEL 230
A+D+WSFGVT+ EL
Sbjct: 211 EYKFYYASDVWSFGVTLYEL 230
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 111/260 (42%), Gaps = 34/260 (13%)
Query: 46 AASYGQEIDGL-----SQLEKLQVLGQGNGGTV---FKVRHKQTLALYAL-KVMQCDRGT 96
A Y QE++ +L+ L+ +G G G+V + R +Q +A+ L + Q
Sbjct: 4 AGFYRQELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHA 63
Query: 97 PPNPQELNILRQTNSPYIVKCHQIFTKPSG-----EVSILMEYMDAGSLEIYVKSRGRLS 151
+EL +L+ ++ +FT + EV ++ M A L VK + LS
Sbjct: 64 RRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGA-DLNNIVKCQA-LS 121
Query: 152 EDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHG 211
++ + + Q+L+GL Y+HS I+HRD+KP+NV +NE E L + +
Sbjct: 122 DEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYV 181
Query: 212 GYNGFAA--------------DIWSFGVTMMELYMGYYPFLEPGQE--PDFLSLMLAICF 255
+ A DIWS G M EL G F PG + +M +
Sbjct: 182 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALF--PGSDYIDQLKRIMEVVGT 239
Query: 256 REPPSLPECSSEKFRDFIRC 275
P L + SSE R +I+
Sbjct: 240 PSPEVLAKISSEHARTYIQS 259
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP-----QELNILRQTNSPYIVKCHQ 119
+G+GN G VF R + L A+K C PP+ QE IL+Q + P IV+
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVK--SCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 120 IFTKPSGEVSILMEYMDAGSLEIYVKSRG-RLSEDIICTISRQVLKGLFYMHSRNIVHRD 178
+ T+ + I+ME + G ++++ G RL + + G+ Y+ S+ +HRD
Sbjct: 180 VCTQKQ-PIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRD 238
Query: 179 IKPANVLINEK-MEHPCGYSCLYESGEARHRKHGG---------------YNGFAA--DI 220
+ N L+ EK + + E + + GG Y +++ D+
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDV 298
Query: 221 WSFGVTMMELY-MGY--YPFLEPGQEPDFL 247
WSFG+ + E + +G YP L Q +F+
Sbjct: 299 WSFGILLWETFSLGASPYPNLSNQQTREFV 328
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 107/255 (41%), Gaps = 28/255 (10%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQE-----LNILRQTNSPYIVKCHQ 119
LG+G F++ T ++A K++ P+ +E ++I R ++V H
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 120 IFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDI 179
F + + V +++E SL K R L+E RQ++ G Y+H ++HRD+
Sbjct: 85 FF-EDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 180 KPANVLINEKMEHPCGYSCLYE----SGEARHRKHGGYN------------GFAADIWSF 223
K N+ +NE +E G L GE + G N F D+WS
Sbjct: 144 KLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSI 203
Query: 224 GVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPS 283
G M L +G PF + +L + + S+P+ + I+ LQ DP+
Sbjct: 204 GCIMYTLLVGKPPFETSCLKETYLRIK-----KNEYSIPKHINPVAASLIQKMLQT-DPT 257
Query: 284 KRWTASQLLSHPFLA 298
R T ++LL+ F
Sbjct: 258 ARPTINELLNDEFFT 272
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 109/257 (42%), Gaps = 28/257 (10%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQE-----LNILRQTNSPYIVKC 117
+ LG+G +++ T ++A KV+ P+ +E + I + ++P++V
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
H F + V +++E SL K R ++E RQ ++G+ Y+H+ ++HR
Sbjct: 108 HGFF-EDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHR 166
Query: 178 DIKPANVLINEKMEHPCGYSCLYE----SGEARHRKHGGYN------------GFAADIW 221
D+K N+ +N+ M+ G L GE + G N F DIW
Sbjct: 167 DLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIW 226
Query: 222 SFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGD 281
S G + L +G PF + ++ + + S+P + IR L D
Sbjct: 227 SLGCILYTLLVGKPPFETSCLKETYIRIK-----KNEYSVPRHINPVASALIRRMLH-AD 280
Query: 282 PSKRWTASQLLSHPFLA 298
P+ R + ++LL+ F
Sbjct: 281 PTLRPSVAELLTDEFFT 297
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 107/255 (41%), Gaps = 28/255 (10%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQE-----LNILRQTNSPYIVKCHQ 119
LG+G F++ T ++A K++ P+ +E ++I R ++V H
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 120 IFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDI 179
F + + V +++E SL K R L+E RQ++ G Y+H ++HRD+
Sbjct: 85 FF-EDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 180 KPANVLINEKMEHPCGYSCLYE----SGEARHRKHGGYN------------GFAADIWSF 223
K N+ +NE +E G L GE + G N F D+WS
Sbjct: 144 KLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSI 203
Query: 224 GVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPS 283
G M L +G PF + +L + + S+P+ + I+ LQ DP+
Sbjct: 204 GCIMYTLLVGKPPFETSCLKETYLRIK-----KNEYSIPKHINPVAASLIQKMLQT-DPT 257
Query: 284 KRWTASQLLSHPFLA 298
R T ++LL+ F
Sbjct: 258 ARPTINELLNDEFFT 272
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 109/257 (42%), Gaps = 28/257 (10%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQE-----LNILRQTNSPYIVKC 117
+ LG+G +++ T ++A KV+ P+ +E + I + ++P++V
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
H F + V +++E SL K R ++E RQ ++G+ Y+H+ ++HR
Sbjct: 108 HGFF-EDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHR 166
Query: 178 DIKPANVLINEKMEHPCGYSCLYE----SGEARHRKHGGYN------------GFAADIW 221
D+K N+ +N+ M+ G L GE + G N F DIW
Sbjct: 167 DLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIW 226
Query: 222 SFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGD 281
S G + L +G PF + ++ + + S+P + IR L D
Sbjct: 227 SLGCILYTLLVGKPPFETSCLKETYIRIK-----KNEYSVPRHINPVASALIRRMLH-AD 280
Query: 282 PSKRWTASQLLSHPFLA 298
P+ R + ++LL+ F
Sbjct: 281 PTLRPSVAELLTDEFFT 297
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 113/280 (40%), Gaps = 48/280 (17%)
Query: 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQ----CDRGTPP-NPQELNILRQTNS 111
E L+V+G+G V V+ KQT +YA+K+M RG +E ++L +
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDR 120
Query: 112 PYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRG-RLSEDIICTISRQVLKGLFYMH 170
+I + H F + + ++MEY G L + G R+ ++ +++ + +H
Sbjct: 121 RWITQLHFAF-QDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH 179
Query: 171 SRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEA-RHRKHGGYNGFAA----------- 218
VHRDIKP N+L++ CG+ L + G + R G A
Sbjct: 180 RLGYVHRDIKPDNILLDR-----CGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEI 234
Query: 219 -----------------DIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL 261
D W+ GV E++ G PF + + + ++E SL
Sbjct: 235 LQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKI---VHYKEHLSL 291
Query: 262 P---ECSSEKFRDFIRCCLQKGDPS-KRWTASQLLSHPFL 297
P E E+ RDFI+ L + R A +HPF
Sbjct: 292 PLVDEGVPEEARDFIQRLLCPPETRLGRGGAGDFRTHPFF 331
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 109/257 (42%), Gaps = 28/257 (10%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQE-----LNILRQTNSPYIVKC 117
+ LG+G +++ T ++A KV+ P+ +E + I + ++P++V
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
H F + V +++E SL K R ++E RQ ++G+ Y+H+ ++HR
Sbjct: 108 HGFF-EDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHR 166
Query: 178 DIKPANVLINEKMEHPCGYSCLYE----SGEARHRKHGGYN------------GFAADIW 221
D+K N+ +N+ M+ G L GE + G N F DIW
Sbjct: 167 DLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIW 226
Query: 222 SFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGD 281
S G + L +G PF + ++ + + S+P + IR L D
Sbjct: 227 SLGCILYTLLVGKPPFETSCLKETYIRIK-----KNEYSVPRHINPVASALIRRMLH-AD 280
Query: 282 PSKRWTASQLLSHPFLA 298
P+ R + ++LL+ F
Sbjct: 281 PTLRPSVAELLTDEFFT 297
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 109/257 (42%), Gaps = 28/257 (10%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQE-----LNILRQTNSPYIVKC 117
+ LG+G +++ T ++A KV+ P+ +E + I + ++P++V
Sbjct: 32 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 91
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
H F + V +++E SL K R ++E RQ ++G+ Y+H+ ++HR
Sbjct: 92 HGFF-EDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHR 150
Query: 178 DIKPANVLINEKMEHPCGYSCLYE----SGEARHRKHGGYN------------GFAADIW 221
D+K N+ +N+ M+ G L GE + G N F DIW
Sbjct: 151 DLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIW 210
Query: 222 SFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGD 281
S G + L +G PF + ++ + + S+P + IR L D
Sbjct: 211 SLGCILYTLLVGKPPFETSCLKETYIRIK-----KNEYSVPRHINPVASALIRRMLH-AD 264
Query: 282 PSKRWTASQLLSHPFLA 298
P+ R + ++LL+ F
Sbjct: 265 PTLRPSVAELLTDEFFT 281
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 107/255 (41%), Gaps = 28/255 (10%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQE-----LNILRQTNSPYIVKCHQ 119
LG+G F++ T ++A K++ P+ +E ++I R ++V H
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 120 IFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDI 179
F + + V +++E SL K R L+E RQ++ G Y+H ++HRD+
Sbjct: 89 FF-EDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 147
Query: 180 KPANVLINEKMEHPCGYSCLYE----SGEARHRKHGGYN------------GFAADIWSF 223
K N+ +NE +E G L GE + G N F D+WS
Sbjct: 148 KLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSI 207
Query: 224 GVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPS 283
G M L +G PF + +L + + S+P+ + I+ LQ DP+
Sbjct: 208 GCIMYTLLVGKPPFETSCLKETYLRIK-----KNEYSIPKHINPVAASLIQKMLQT-DPT 261
Query: 284 KRWTASQLLSHPFLA 298
R T ++LL+ F
Sbjct: 262 ARPTINELLNDEFFT 276
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 77/147 (52%), Gaps = 15/147 (10%)
Query: 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALK--VMQCDR-GTPPNP-QELNILRQT 109
D +S+ EKL +GQG G VFK RH++T ALK +M+ ++ G P +E+ IL+
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 74
Query: 110 NSPYIVKCHQI-------FTKPSGEVSILMEY--MDAGSLEIYVKSRGRLSEDIICTISR 160
+V +I + + + ++ ++ D L V + LSE I + +
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQ 132
Query: 161 QVLKGLFYMHSRNIVHRDIKPANVLIN 187
+L GL+Y+H I+HRD+K ANVLI
Sbjct: 133 MLLNGLYYIHRNKILHRDMKAANVLIT 159
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 105/235 (44%), Gaps = 25/235 (10%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQIFTKP 124
LG G G V+ + + + + +E N+++ +V+ + + T+
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTRE 80
Query: 125 SGEVSILMEYMDAGSLEIYVKSR--GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPA 182
+ I+ EYM GSL ++KS G++ + S Q+ +G+ Y+ +N +HRD++ A
Sbjct: 81 E-PIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAA 139
Query: 183 NVLINEKME---HPCGYSCLYESGEARHRKHG--------------GYNGFAADIWSFGV 225
NVL++E + G + + E E R+ G +D+WSFG+
Sbjct: 140 NVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGI 199
Query: 226 TMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQK 279
+ E+ G P+ PG+ + L+ +R P + C E + D ++ C ++
Sbjct: 200 LLYEIVTYGKIPY--PGRTNADVMTALSQGYR-MPRVENCPDELY-DIMKMCWKE 250
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 107/249 (42%), Gaps = 60/249 (24%)
Query: 101 QELNILRQTNSPYIVKCHQIFTKPS-----GEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 99 RELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 156
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHR--KHGGY 213
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE C L + G ARH + GY
Sbjct: 157 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKIL-DFGLARHTDDEMTGY 211
Query: 214 -----------------NGFAADIWSFGVTMMELYMGYYPFLEPG-----QEPDFLSLM- 250
DIWS G M EL G F PG Q + L
Sbjct: 212 VATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLF--PGTDHINQLQQIMRLTG 269
Query: 251 ---LAICFREPP--------SLPECSSEKFRD-FIRC------CLQKG---DPSKRWTAS 289
++ R P SLP+ F D FI L+K D KR TAS
Sbjct: 270 TPPASVISRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITAS 329
Query: 290 QLLSHPFLA 298
+ L+HP+ +
Sbjct: 330 EALAHPYFS 338
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 114/260 (43%), Gaps = 31/260 (11%)
Query: 59 LEKLQVLGQGNGGTVFKVRHKQTLALYALK-VMQCDRGTPPNPQELNIL----RQTNSPY 113
++L LG G+ G VFKVR K+ LYA+K M RG ++L + + P
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPC 118
Query: 114 IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRG-RLSEDIICTISRQVLKGLFYMHSR 172
V+ Q + + G + L + SL+ + ++ G L E + R L L ++HS+
Sbjct: 119 CVRLEQAWEE--GGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ 176
Query: 173 NIVHRDIKPANVLINEKMEHPCG-YSCLYESGEARHRK--------------HGGYNGFA 217
+VH D+KPAN+ + + G + L E G A + G Y G A
Sbjct: 177 GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGSY-GTA 235
Query: 218 ADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCL 277
AD++S G+T++E+ L G E + L PP S + R + L
Sbjct: 236 ADVFSLGLTILEVACNME--LPHGGE-GWQQLRQGYL---PPEFTAGLSSELRSVLVMML 289
Query: 278 QKGDPSKRWTASQLLSHPFL 297
+ DP R TA LL+ P L
Sbjct: 290 EP-DPKLRATAEALLALPVL 308
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 35/220 (15%)
Query: 48 SYGQEIDGLSQLEKLQVLGQGNGGTVFKVR------HKQTLALYALKVMQCDRGTPPNPQ 101
S+ +EI+ S++ +++G G+ G V R +A+ ALK +R
Sbjct: 41 SFTREIEA-SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLS 99
Query: 102 ELNILRQTNSPYIVKCHQIFTKPSGEVS-ILMEYMDAGSLEIYVKSR-GRLSEDIICTIS 159
E +I+ Q + P I++ + T+ G ++ I+ EYM+ GSL+ ++++ G+ + + +
Sbjct: 100 EASIMGQFDHPNIIRLEGVVTR--GRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGML 157
Query: 160 RQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS------CLYESGEARHRKHGG- 212
R V G+ Y+ VHRD+ NVL++ + C S L + +A + GG
Sbjct: 158 RGVGAGMRYLSDLGYVHRDLAARNVLVDSNL--VCKVSDFGLSRVLEDDPDAAYTTTGGK 215
Query: 213 ------------YNGF--AADIWSFGVTMME-LYMGYYPF 237
+ F A+D+WSFGV M E L G P+
Sbjct: 216 IPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPY 255
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 107/255 (41%), Gaps = 28/255 (10%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQE-----LNILRQTNSPYIVKCHQ 119
LG+G F++ T ++A K++ P+ +E ++I R ++V H
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 120 IFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDI 179
F + + V +++E SL K R L+E RQ++ G Y+H ++HRD+
Sbjct: 83 FF-EDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 141
Query: 180 KPANVLINEKMEHPCGYSCLYE----SGEARHRKHGGYN------------GFAADIWSF 223
K N+ +NE +E G L GE + G N F D+WS
Sbjct: 142 KLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSI 201
Query: 224 GVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPS 283
G M L +G PF + +L + + S+P+ + I+ LQ DP+
Sbjct: 202 GCIMYTLLVGKPPFETSCLKETYLRIK-----KNEYSIPKHINPVAASLIQKMLQT-DPT 255
Query: 284 KRWTASQLLSHPFLA 298
R T ++LL+ F
Sbjct: 256 ARPTINELLNDEFFT 270
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 108/259 (41%), Gaps = 26/259 (10%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELN----ILRQTNSPYIVKC 117
+ LG+G V + T YA K++ + + + Q+L I R P IV+
Sbjct: 9 FEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRL 68
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
H ++ G ++ + + G L + +R SE +Q+L+ + + H IVHR
Sbjct: 69 HDSISE-EGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHR 127
Query: 178 DIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFAA------------------- 218
D+KP N+L+ K + + + GFA
Sbjct: 128 DLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPV 187
Query: 219 DIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQ 278
D+W+ GV + L +GY PF + Q + + A + P + + + +D I L
Sbjct: 188 DMWACGVILYILLVGYPPFWDEDQHRLYQQIK-AGAYDFPSPEWDTVTPEAKDLINKMLT 246
Query: 279 KGDPSKRWTASQLLSHPFL 297
+P+KR TAS+ L HP++
Sbjct: 247 I-NPAKRITASEALKHPWI 264
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 108/259 (41%), Gaps = 26/259 (10%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELN----ILRQTNSPYIVKC 117
+ LG+G V + T YA K++ + + + Q+L I R P IV+
Sbjct: 9 FEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRL 68
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
H ++ G ++ + + G L + +R SE +Q+L+ + + H IVHR
Sbjct: 69 HDSISE-EGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHR 127
Query: 178 DIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFAA------------------- 218
D+KP N+L+ K + + + GFA
Sbjct: 128 DLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPV 187
Query: 219 DIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQ 278
D+W+ GV + L +GY PF + Q + + A + P + + + +D I L
Sbjct: 188 DMWACGVILYILLVGYPPFWDEDQHRLYQQIK-AGAYDFPSPEWDTVTPEAKDLINKMLT 246
Query: 279 KGDPSKRWTASQLLSHPFL 297
+P+KR TAS+ L HP++
Sbjct: 247 I-NPAKRITASEALKHPWI 264
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 107/255 (41%), Gaps = 28/255 (10%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQE-----LNILRQTNSPYIVKCHQ 119
LG+G F++ T ++A K++ P+ +E ++I R ++V H
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 120 IFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDI 179
F + + V +++E SL K R L+E RQ++ G Y+H ++HRD+
Sbjct: 107 FF-EDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 165
Query: 180 KPANVLINEKMEHPCGYSCLYE----SGEARHRKHGGYN------------GFAADIWSF 223
K N+ +NE +E G L GE + G N F D+WS
Sbjct: 166 KLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSI 225
Query: 224 GVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPS 283
G M L +G PF + +L + + S+P+ + I+ LQ DP+
Sbjct: 226 GCIMYTLLVGKPPFETSCLKETYLRIK-----KNEYSIPKHINPVAASLIQKMLQT-DPT 279
Query: 284 KRWTASQLLSHPFLA 298
R T ++LL+ F
Sbjct: 280 ARPTINELLNDEFFT 294
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 106/245 (43%), Gaps = 52/245 (21%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT + +V ++ M A L VK + +L++D +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQ-KLTDDHV 127
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKME------HPCGYSCLYESGEARHRK 209
+ Q+L+GL Y+HS +I+HRD+KP+N+ +NE E + ++ +G R
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATRW 187
Query: 210 HGG---------YNGFAADIWSFGVTMMELYMGYYPFLEPGQEP-DFLSLMLAICFREPP 259
+ YN DIWS G M EL G F PG + D L L+L +
Sbjct: 188 YRAPEIMLNWMHYNQ-TVDIWSVGCIMAELLTGRTLF--PGTDHIDQLKLILRLVGTPGA 244
Query: 260 S-LPECSSEKFRDFIRCCLQKG-------------------------DPSKRWTASQLLS 293
L + SSE R++I+ Q D KR TA+Q L+
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 304
Query: 294 HPFLA 298
H + A
Sbjct: 305 HAYFA 309
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 107/255 (41%), Gaps = 28/255 (10%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQE-----LNILRQTNSPYIVKCHQ 119
LG+G F++ T ++A K++ P+ +E ++I R ++V H
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 120 IFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDI 179
F + + V +++E SL K R L+E RQ++ G Y+H ++HRD+
Sbjct: 109 FF-EDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 167
Query: 180 KPANVLINEKMEHPCGYSCLYE----SGEARHRKHGGYN------------GFAADIWSF 223
K N+ +NE +E G L GE + G N F D+WS
Sbjct: 168 KLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSI 227
Query: 224 GVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPS 283
G M L +G PF + +L + + S+P+ + I+ LQ DP+
Sbjct: 228 GCIMYTLLVGKPPFETSCLKETYLRIK-----KNEYSIPKHINPVAASLIQKMLQT-DPT 281
Query: 284 KRWTASQLLSHPFLA 298
R T ++LL+ F
Sbjct: 282 ARPTINELLNDEFFT 296
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 119/261 (45%), Gaps = 32/261 (12%)
Query: 61 KLQV-LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-PQELNILRQTNSPYIVKCH 118
+L+V LGQG G V+ T + A+K ++ +P QE ++++ +V+ +
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY 79
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSR-GR-LSEDIICTISRQVLKGLFYMHSRNIVH 176
+ ++ + I++EYM GSL ++K G+ L + ++ Q+ G+ Y+ N VH
Sbjct: 80 AVVSEEP--IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 177 RDIKPANVLINEKM---EHPCGYSCLYESGEARHRKHG--------------GYNGFAAD 219
RD++ AN+L+ E + G + L E E R+ G +D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 220 IWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQ 278
+WSFG+ + EL G P+ PG + + +R P PEC E D + C +
Sbjct: 198 VWSFGILLTELTTKGRVPY--PGMVNREVLDQVERGYRM-PCPPEC-PESLHDLMCQCWR 253
Query: 279 KGDPSKRWTASQLLSHPFLAD 299
K DP +R T L FL D
Sbjct: 254 K-DPEERPTFEYL--QAFLED 271
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 117/258 (45%), Gaps = 40/258 (15%)
Query: 49 YGQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQ------TLALYALKVMQCDRGTPPNPQE 102
+ +E+D + + +V+G G G V R K ++A+ LKV ++ E
Sbjct: 38 FAKELDA-TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 103 LNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQ 161
+I+ Q + P I++ + TK S V I+ E M+ GSL+ ++ K + + + + R
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTK-SKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 162 VLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS------CLYESGEARHRKHGG--- 212
+ G+ Y+ VHRD+ N+LIN + C S L + EA + GG
Sbjct: 156 IASGMKYLSDMGAVHRDLAARNILINSNL--VCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 213 ----------YNGF--AADIWSFGVTMME-LYMGYYPFLEPGQEPDFLSLMLAI--CFRE 257
Y F A+D+WS+G+ + E + G P+ E + ++ A+ +R
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAVDEGYRL 269
Query: 258 PPSLPECSSEKFRDFIRC 275
PP + +C + ++ + C
Sbjct: 270 PPPM-DCPAALYQLMLDC 286
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 30/200 (15%)
Query: 59 LEKLQVLGQGNGGTV----FKVRHKQTLALYALKVMQCDRGTPPNP---QELNILRQTNS 111
L+K++ LG+G+ G V + + T + A+K ++ D G QE++ILR
Sbjct: 16 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYH 75
Query: 112 PYIVKCHQIFTKPSGEVSI--LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
+I+K ++ + GE S+ +MEY+ GSL Y+ R + + ++Q+ +G+ Y+
Sbjct: 76 EHIIK-YKGCCEDQGEKSLQLVMEYVPLGSLRDYL-PRHSIGLAQLLLFAQQICEGMAYL 133
Query: 170 HSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHGGYNGF-------- 216
HS++ +HR++ NVL++ G L ++ H R+ G F
Sbjct: 134 HSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 217 ------AADIWSFGVTMMEL 230
A+D+WSFGVT+ EL
Sbjct: 194 EYKFYYASDVWSFGVTLYEL 213
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 109/265 (41%), Gaps = 46/265 (17%)
Query: 64 VLGQGNGGTVFKVRHKQTLALYALKVMQCDR--GTPP------NPQELNILRQTNS---- 111
+LG+G GTVF A+KV+ +R G P P E+ +L + +
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 112 PYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHS 171
P +++ F G + +L + A L Y+ +G L E QV+ + + HS
Sbjct: 98 PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHS 157
Query: 172 RNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK------------------HGGY 213
R +VHRDIK N+LI+ + C + SG H + Y
Sbjct: 158 RGVVHRDIKDENILID--LRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQY 215
Query: 214 NGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL-PECSSEKFRDF 272
+ A +WS G+ + ++ G PF E QE +L P + P+C +
Sbjct: 216 HALPATVWSLGILLYDMVCGDIPF-ERDQE------ILEAELHFPAHVSPDCCA-----L 263
Query: 273 IRCCLQKGDPSKRWTASQLLSHPFL 297
IR CL PS R + ++L P++
Sbjct: 264 IRRCLAP-KPSSRPSLEEILLDPWM 287
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 117/258 (45%), Gaps = 40/258 (15%)
Query: 49 YGQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQ------TLALYALKVMQCDRGTPPNPQE 102
+ +E+D + + +V+G G G V R K ++A+ LKV ++ E
Sbjct: 38 FAKELDA-TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 103 LNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQ 161
+I+ Q + P I++ + TK S V I+ E M+ GSL+ ++ K + + + + R
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTK-SKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 162 VLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS------CLYESGEARHRKHGG--- 212
+ G+ Y+ VHRD+ N+LIN + C S L + EA + GG
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNL--VCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 213 ----------YNGF--AADIWSFGVTMME-LYMGYYPFLEPGQEPDFLSLMLAI--CFRE 257
Y F A+D+WS+G+ + E + G P+ E + ++ A+ +R
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAVDEGYRL 269
Query: 258 PPSLPECSSEKFRDFIRC 275
PP + +C + ++ + C
Sbjct: 270 PPPM-DCPAALYQLMLDC 286
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 120/263 (45%), Gaps = 36/263 (13%)
Query: 61 KLQV-LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-PQELNILRQTNSPYIVKCH 118
+L+V LGQG G V+ T + A+K ++ +P QE ++++ +V+ +
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY 79
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDI----ICTISRQVLKGLFYMHSRNI 174
+ ++ + I++EYM GSL ++K G + + + + ++ Q+ G+ Y+ N
Sbjct: 80 AVVSEEP--IYIVIEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 175 VHRDIKPANVLINEKM---EHPCGYSCLYESGEARHRKHG--------------GYNGFA 217
VHRD++ AN+L+ E + G + L E E R+ G
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 218 ADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276
+D+WSFG+ + EL G P+ PG + + +R P PEC E D + C
Sbjct: 196 SDVWSFGILLTELTTKGRVPY--PGMVNREVLDQVERGYRMPCP-PEC-PESLHDLMCQC 251
Query: 277 LQKGDPSKRWTASQLLSHPFLAD 299
+K DP +R T L FL D
Sbjct: 252 WRK-DPEERPTFEYL--QAFLED 271
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 35/220 (15%)
Query: 48 SYGQEIDGLSQLEKLQVLGQGNGGTVFKVR------HKQTLALYALKVMQCDRGTPPNPQ 101
S+ +EI+ S++ +++G G+ G V R +A+ ALK +R
Sbjct: 41 SFTREIEA-SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLS 99
Query: 102 ELNILRQTNSPYIVKCHQIFTKPSGEVS-ILMEYMDAGSLEIYVKSR-GRLSEDIICTIS 159
E +I+ Q + P I++ + T+ G ++ I+ EYM+ GSL+ ++++ G+ + + +
Sbjct: 100 EASIMGQFDHPNIIRLEGVVTR--GRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGML 157
Query: 160 RQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS------CLYESGEARHRKHGG- 212
R V G+ Y+ VHRD+ NVL++ + C S L + +A GG
Sbjct: 158 RGVGAGMRYLSDLGYVHRDLAARNVLVDSNL--VCKVSDFGLSRVLEDDPDAAXTTTGGK 215
Query: 213 ------------YNGF--AADIWSFGVTMME-LYMGYYPF 237
+ F A+D+WSFGV M E L G P+
Sbjct: 216 IPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPY 255
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 115/256 (44%), Gaps = 36/256 (14%)
Query: 49 YGQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQ------TLALYALKVMQCDRGTPPNPQE 102
+ +E+D + + +V+G G G V R K ++A+ LKV ++ E
Sbjct: 9 FAKELDA-TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 67
Query: 103 LNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQ 161
+I+ Q + P I++ + TK S V I+ E M+ GSL+ ++ K + + + + R
Sbjct: 68 ASIMGQFDHPNIIRLEGVVTK-SKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRG 126
Query: 162 VLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS------CLYESGEARHRKHGG--- 212
+ G+ Y+ VHRD+ N+LIN + C S L + EA + GG
Sbjct: 127 IASGMKYLSDMGYVHRDLAARNILINSNL--VCKVSDFGLSRVLEDDPEAAYTTRGGKIP 184
Query: 213 ----------YNGF--AADIWSFGVTMME-LYMGYYPFLEPGQEPDFLSLMLAICFREPP 259
Y F A+D+WS+G+ + E + G P+ E + ++ +R PP
Sbjct: 185 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG--YRLPP 242
Query: 260 SLPECSSEKFRDFIRC 275
+ +C + ++ + C
Sbjct: 243 PM-DCPAALYQLMLDC 257
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 25/129 (19%)
Query: 130 ILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINE- 188
++MEY++ +L Y++S G LS D + Q+L G+ + H IVHRDIKP N+LI+
Sbjct: 88 LVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSN 147
Query: 189 --------------------KMEHPCGYSCLYESGEARHRKHGGYNGFAADIWSFGVTMM 228
+ H G + +A+ G DI+S G+ +
Sbjct: 148 KTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAK----GEATDECTDIYSIGIVLY 203
Query: 229 ELYMGYYPF 237
E+ +G PF
Sbjct: 204 EMLVGEPPF 212
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 111/243 (45%), Gaps = 29/243 (11%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDR-GTPPNPQELNILRQTNSPYIVKCHQIFTK 123
LG G G V++ K+ A+K ++ D +E ++++ P +V+ + T+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 124 PSGEVSILMEYMDAGSLEIYVK--SRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKP 181
I++E+M G+L Y++ +R +S ++ ++ Q+ + Y+ +N +HRD+
Sbjct: 79 EP-PFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAA 137
Query: 182 ANVLINEK---MEHPCGYSCLYESGEARHRKHG-------------GYNGFA--ADIWSF 223
N L+ E G S L +G+ G YN F+ +D+W+F
Sbjct: 138 RNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 196
Query: 224 GVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDP 282
GV + E+ G P+ PG +P + +L +R PE EK + +R C Q +P
Sbjct: 197 GVLLWEIATYGMSPY--PGIDPSQVYELLEKDYR--MERPEGCPEKVYELMRACWQ-WNP 251
Query: 283 SKR 285
S R
Sbjct: 252 SDR 254
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 118/267 (44%), Gaps = 42/267 (15%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCD------RGTPPNPQELNILRQTNSPYIVK 116
+LG+G+ G V +V +TL A+K+++ G +E+ +LR+ +++
Sbjct: 11 DLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQ 70
Query: 117 CHQI-FTKPSGEVSILMEYMDAGSLEIYVKSRGRL-----SEDIICTISRQVLKGLFYMH 170
+ + + ++ ++MEY G E+ + + C Q++ GL Y+H
Sbjct: 71 LVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFC----QLIDGLEYLH 126
Query: 171 SRNIVHRDIKPANVLINE------------KMEHPCGY--SCLYESGEARHR----KHG- 211
S+ IVH+DIKP N+L+ + HP +C G + +G
Sbjct: 127 SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGL 186
Query: 212 -GYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFR 270
++GF DIWS GVT+ + G YPF E D + + + ++P
Sbjct: 187 DTFSGFKVDIWSAGVTLYNITTGLYPF-----EGDNIYKLFENIGKGSYAIPGDCGPPLS 241
Query: 271 DFIRCCLQKGDPSKRWTASQLLSHPFL 297
D ++ L+ +P+KR++ Q+ H +
Sbjct: 242 DLLKGMLEY-EPAKRFSIRQIRQHSWF 267
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 119/263 (45%), Gaps = 36/263 (13%)
Query: 61 KLQV-LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-PQELNILRQTNSPYIVKCH 118
+L+V LGQG G V+ T + A+K ++ +P QE ++++ +V+ +
Sbjct: 18 RLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY 76
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRG----RLSEDIICTISRQVLKGLFYMHSRNI 174
+ ++ + I+ EYM+ GSL ++K RL + + +S Q+ G+ Y+ N
Sbjct: 77 AVVSEEP--IYIVTEYMNKGSLLDFLKGETGKYLRLPQ--LVDMSAQIASGMAYVERMNY 132
Query: 175 VHRDIKPANVLINEKM---EHPCGYSCLYESGEARHRKHG--------------GYNGFA 217
VHRD++ AN+L+ E + G + L E E R+ G
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIK 192
Query: 218 ADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276
+D+WSFG+ + EL G P+ PG + + +R P PEC E D + C
Sbjct: 193 SDVWSFGILLTELTTKGRVPY--PGMVNREVLDQVERGYRM-PCPPEC-PESLHDLMCQC 248
Query: 277 LQKGDPSKRWTASQLLSHPFLAD 299
+K +P +R T L FL D
Sbjct: 249 WRK-EPEERPTFEYL--QAFLED 268
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 122/310 (39%), Gaps = 78/310 (25%)
Query: 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALK--VMQCDRGTPPNPQELNILRQTNSPYI 114
S+ L+ LG G G VF A+K V+ + +E+ I+R+ + I
Sbjct: 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNI 70
Query: 115 VKCHQIFTKPSGE--------------VSILMEYMDAGSLEIYVKSRGRLSEDIICTISR 160
VK +I PSG V I+ EYM+ V +G L E+
Sbjct: 71 VKVFEIL-GPSGSQLTDDVGSLTELNSVYIVQEYMETDLAN--VLEQGPLLEEHARLFMY 127
Query: 161 QVLKGLFYMHSRNIVHRDIKPANVLIN-EKMEHPCGYSCLYESGEAR----HRKHGGY-- 213
Q+L+GL Y+HS N++HRD+KPAN+ IN E + G + G AR H H G+
Sbjct: 128 QLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIG-----DFGLARIMDPHYSHKGHLS 182
Query: 214 -----------------NGF--AADIWSFGVTMMELYMGYYPF-----LEPGQ------- 242
N + A D+W+ G E+ G F LE Q
Sbjct: 183 EGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIP 242
Query: 243 ---EPDFLSLMLAI------CFREPPS-----LPECSSEKFRDFIRCCLQKGDPSKRWTA 288
E D L+ I EP LP S E DF+ L P R TA
Sbjct: 243 VVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAV-DFLEQILTFS-PMDRLTA 300
Query: 289 SQLLSHPFLA 298
+ LSHP+++
Sbjct: 301 EEALSHPYMS 310
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 119/263 (45%), Gaps = 36/263 (13%)
Query: 61 KLQV-LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-PQELNILRQTNSPYIVKCH 118
+L+V LGQG G V+ T + A+K ++ +P QE ++++ +V+ +
Sbjct: 18 RLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY 76
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRG----RLSEDIICTISRQVLKGLFYMHSRNI 174
+ ++ + I+ EYM+ GSL ++K RL + + +S Q+ G+ Y+ N
Sbjct: 77 AVVSEEP--IYIVTEYMNKGSLLDFLKGETGKYLRLPQ--LVDMSAQIASGMAYVERMNY 132
Query: 175 VHRDIKPANVLINEKM---EHPCGYSCLYESGEARHRKHG--------------GYNGFA 217
VHRD++ AN+L+ E + G + L E E R+ G
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 192
Query: 218 ADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276
+D+WSFG+ + EL G P+ PG + + +R P PEC E D + C
Sbjct: 193 SDVWSFGILLTELTTKGRVPY--PGMVNREVLDQVERGYRM-PCPPEC-PESLHDLMCQC 248
Query: 277 LQKGDPSKRWTASQLLSHPFLAD 299
+K +P +R T L FL D
Sbjct: 249 WRK-EPEERPTFEYL--QAFLED 268
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 123/276 (44%), Gaps = 61/276 (22%)
Query: 63 QVLGQGNGG-----TVFKVRHKQTLALYALKVMQCDRGTPPNPQEL----NILRQTNSPY 113
+ LG+G G T F ++ + A+K+++ + +P ++L N+L+Q N P+
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK-ENASPSELRDLLSEFNVLKQVNHPH 87
Query: 114 IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR------------------------ 149
++K + ++ G + +++EY GSL +++ +
Sbjct: 88 VIKLYGACSQ-DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 150 LSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINE--KME-HPCGYS-CLYESGEA 205
L+ + + + Q+ +G+ Y+ ++VHRD+ N+L+ E KM+ G S +YE
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 206 RHRKHGG--------------YNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLM 250
R G +D+WSFGV + E+ +G P+ PG P+ L +
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY--PGIPPERLFNL 264
Query: 251 LAICFR-EPPSLPECSSEKFRDFIRCCLQKGDPSKR 285
L R E P CS E +R ++C Q +P KR
Sbjct: 265 LKTGHRMERPD--NCSEEMYRLMLQCWKQ--EPDKR 296
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 109/260 (41%), Gaps = 26/260 (10%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELN----ILRQTNSPYIVKC 117
+ LG+G V + YA ++ + + + Q+L I R P IV+
Sbjct: 16 FEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRL 75
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
H ++ G ++ + + G L + +R SE +Q+L+ + + H +VHR
Sbjct: 76 HDSISE-EGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHR 134
Query: 178 DIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFAA------------------- 218
++KP N+L+ K++ + + + GFA
Sbjct: 135 NLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPV 194
Query: 219 DIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQ 278
D+W+ GV + L +GY PF + Q + + A + P + + + +D I L
Sbjct: 195 DLWACGVILYILLVGYPPFWDEDQHRLYQQIK-AGAYDFPSPEWDTVTPEAKDLINKMLT 253
Query: 279 KGDPSKRWTASQLLSHPFLA 298
+PSKR TA++ L HP+++
Sbjct: 254 I-NPSKRITAAEALKHPWIS 272
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 31/213 (14%)
Query: 59 LEKLQVLGQGNGGTVFKVRHK----QTLALYALKVMQ--CDRGTPPNPQELNILRQTNSP 112
L+ LQ LG+GN G+V R+ T + A+K +Q + +E+ IL+
Sbjct: 17 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 76
Query: 113 YIVKCHQI-FTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQVLKGLFYMH 170
IVK + ++ + ++MEY+ GSL Y+ K + R+ + + Q+ KG+ Y+
Sbjct: 77 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 136
Query: 171 SRNIVHRDIKPANVLINEKMEHPCG----YSCLYESGEARHRKHGGYN------------ 214
++ +HRD+ N+L+ + G L + E K G +
Sbjct: 137 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 196
Query: 215 ---GFAADIWSFGVTMMELYMGYYPFLEPGQEP 244
A+D+WSFGV + EL+ ++E + P
Sbjct: 197 SKFSVASDVWSFGVVLYELFT----YIEKSKSP 225
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 31/213 (14%)
Query: 59 LEKLQVLGQGNGGTVFKVRHK----QTLALYALKVMQ--CDRGTPPNPQELNILRQTNSP 112
L+ LQ LG+GN G+V R+ T + A+K +Q + +E+ IL+
Sbjct: 19 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 78
Query: 113 YIVKCHQI-FTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQVLKGLFYMH 170
IVK + ++ + ++MEY+ GSL Y+ K + R+ + + Q+ KG+ Y+
Sbjct: 79 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 138
Query: 171 SRNIVHRDIKPANVLINEKMEHPCG----YSCLYESGEARHRKHGGYN------------ 214
++ +HRD+ N+L+ + G L + E K G +
Sbjct: 139 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 198
Query: 215 ---GFAADIWSFGVTMMELYMGYYPFLEPGQEP 244
A+D+WSFGV + EL+ ++E + P
Sbjct: 199 SKFSVASDVWSFGVVLYELFT----YIEKSKSP 227
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 119/263 (45%), Gaps = 36/263 (13%)
Query: 61 KLQV-LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-PQELNILRQTNSPYIVKCH 118
+L+V LGQG G V+ T + A+K ++ +P QE ++++ +V+ +
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLY 79
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDI----ICTISRQVLKGLFYMHSRNI 174
+ ++ + I+ EYM GSL ++K G + + + + ++ Q+ G+ Y+ N
Sbjct: 80 AVVSEEP--IYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 175 VHRDIKPANVLINEKM---EHPCGYSCLYESGEARHRKHG--------------GYNGFA 217
VHRD++ AN+L+ E + G + L E E R+ G
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 218 ADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276
+D+WSFG+ + EL G P+ PG + + +R P PEC E D + C
Sbjct: 196 SDVWSFGILLTELTTKGRVPY--PGMVNREVLDQVERGYRM-PCPPEC-PESLHDLMCQC 251
Query: 277 LQKGDPSKRWTASQLLSHPFLAD 299
+K DP +R T L FL D
Sbjct: 252 WRK-DPEERPTFEYL--QAFLED 271
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 31/213 (14%)
Query: 59 LEKLQVLGQGNGGTVFKVRHK----QTLALYALKVMQ--CDRGTPPNPQELNILRQTNSP 112
L+ LQ LG+GN G+V R+ T + A+K +Q + +E+ IL+
Sbjct: 43 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 102
Query: 113 YIVKCHQI-FTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQVLKGLFYMH 170
IVK + ++ + ++MEY+ GSL Y+ K + R+ + + Q+ KG+ Y+
Sbjct: 103 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 162
Query: 171 SRNIVHRDIKPANVLINEKMEHPCG----YSCLYESGEARHRKHGGYN------------ 214
++ +HRD+ N+L+ + G L + E K G +
Sbjct: 163 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 222
Query: 215 ---GFAADIWSFGVTMMELYMGYYPFLEPGQEP 244
A+D+WSFGV + EL+ ++E + P
Sbjct: 223 SKFSVASDVWSFGVVLYELFT----YIEKSKSP 251
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 101/221 (45%), Gaps = 33/221 (14%)
Query: 59 LEKLQVLGQGNGGTVFKVRHK----QTLALYALKVMQ--CDRGTPPNPQELNILRQTNSP 112
L+ LQ LG+GN G+V R+ T + A+K +Q + +E+ IL+
Sbjct: 11 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 70
Query: 113 YIVKCHQI-FTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQVLKGLFYMH 170
IVK + ++ + ++MEY+ GSL Y+ K + R+ + + Q+ KG+ Y+
Sbjct: 71 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 130
Query: 171 SRNIVHRDIKPANVLINEKMEHPCG----YSCLYESGEARHRKHGGYN------------ 214
++ +HRD+ N+L+ + G L + E K G +
Sbjct: 131 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 190
Query: 215 ---GFAADIWSFGVTMMELYMGYYPFLEPGQEP--DFLSLM 250
A+D+WSFGV + EL+ ++E + P +F+ ++
Sbjct: 191 SKFSVASDVWSFGVVLYELFT----YIEKSKSPPAEFMRMI 227
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 31/213 (14%)
Query: 59 LEKLQVLGQGNGGTVFKVRHK----QTLALYALKVMQ--CDRGTPPNPQELNILRQTNSP 112
L+ LQ LG+GN G+V R+ T + A+K +Q + +E+ IL+
Sbjct: 18 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 77
Query: 113 YIVKCHQI-FTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQVLKGLFYMH 170
IVK + ++ + ++MEY+ GSL Y+ K + R+ + + Q+ KG+ Y+
Sbjct: 78 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 137
Query: 171 SRNIVHRDIKPANVLINEKMEHPCG----YSCLYESGEARHRKHGGYN------------ 214
++ +HRD+ N+L+ + G L + E K G +
Sbjct: 138 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 197
Query: 215 ---GFAADIWSFGVTMMELYMGYYPFLEPGQEP 244
A+D+WSFGV + EL + ++E + P
Sbjct: 198 SKFSVASDVWSFGVVLYEL----FTYIEKSKSP 226
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 101/221 (45%), Gaps = 33/221 (14%)
Query: 59 LEKLQVLGQGNGGTVFKVRHK----QTLALYALKVMQ--CDRGTPPNPQELNILRQTNSP 112
L+ LQ LG+GN G+V R+ T + A+K +Q + +E+ IL+
Sbjct: 10 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 69
Query: 113 YIVKCHQI-FTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQVLKGLFYMH 170
IVK + ++ + ++MEY+ GSL Y+ K + R+ + + Q+ KG+ Y+
Sbjct: 70 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 129
Query: 171 SRNIVHRDIKPANVLINEKMEHPCG----YSCLYESGEARHRKHGGYN------------ 214
++ +HRD+ N+L+ + G L + E K G +
Sbjct: 130 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 189
Query: 215 ---GFAADIWSFGVTMMELYMGYYPFLEPGQEP--DFLSLM 250
A+D+WSFGV + EL+ ++E + P +F+ ++
Sbjct: 190 SKFSVASDVWSFGVVLYELFT----YIEKSKSPPAEFMRMI 226
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 31/213 (14%)
Query: 59 LEKLQVLGQGNGGTVFKVRHK----QTLALYALKVMQ--CDRGTPPNPQELNILRQTNSP 112
L+ LQ LG+GN G+V R+ T + A+K +Q + +E+ IL+
Sbjct: 16 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 75
Query: 113 YIVKCHQI-FTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQVLKGLFYMH 170
IVK + ++ + ++MEY+ GSL Y+ K + R+ + + Q+ KG+ Y+
Sbjct: 76 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 135
Query: 171 SRNIVHRDIKPANVLINEKMEHPCG----YSCLYESGEARHRKHGGYN------------ 214
++ +HRD+ N+L+ + G L + E K G +
Sbjct: 136 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 195
Query: 215 ---GFAADIWSFGVTMMELYMGYYPFLEPGQEP 244
A+D+WSFGV + EL+ ++E + P
Sbjct: 196 SKFSVASDVWSFGVVLYELFT----YIEKSKSP 224
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 99/200 (49%), Gaps = 30/200 (15%)
Query: 59 LEKLQVLGQGNGGTV----FKVRHKQTLALYALKVMQCDRGTPPNP---QELNILRQTNS 111
L+K++ LG+G+ G V + + T + A+K ++ D G QE++ILR
Sbjct: 16 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYH 75
Query: 112 PYIVKCHQIFTKPSGEVSI--LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
+I+K ++ + GE S+ +MEY+ GSL Y+ R + + ++Q+ +G+ Y+
Sbjct: 76 EHIIK-YKGCCEDQGEKSLQLVMEYVPLGSLRDYL-PRHSIGLAQLLLFAQQICEGMAYL 133
Query: 170 HSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHGGYNGF-------- 216
H+++ +HR++ NVL++ G L ++ H R+ G F
Sbjct: 134 HAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 217 ------AADIWSFGVTMMEL 230
A+D+WSFGVT+ EL
Sbjct: 194 EYKFYYASDVWSFGVTLYEL 213
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 106/252 (42%), Gaps = 32/252 (12%)
Query: 57 SQLEKLQVLGQGNGGTVFK-------VRHKQTLALYALKVMQCDRGTPPNPQELNILRQT 109
++ +K++VLG G GTV+K + K +A+ L+ + E ++
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFY 168
++P++ C + + V ++M+ M G L YV+ + + + Q+ KG+ Y
Sbjct: 76 DNPHV--CRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 133
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEARHRKHGG------------- 212
+ R +VHRD+ NVL+ G + L + E + GG
Sbjct: 134 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 193
Query: 213 --YNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
+D+WS+GVT+ EL G P+ G +S +L R P P C+ + +
Sbjct: 194 HRIYTHQSDVWSYGVTVWELMTFGSKPY--DGIPASEISSILEKGERLPQP-PICTIDVY 250
Query: 270 RDFIRCCLQKGD 281
++C + D
Sbjct: 251 MIMVKCWMIDAD 262
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 31/213 (14%)
Query: 59 LEKLQVLGQGNGGTVFKVRHK----QTLALYALKVMQ--CDRGTPPNPQELNILRQTNSP 112
L+ LQ LG+GN G+V R+ T + A+K +Q + +E+ IL+
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 71
Query: 113 YIVKCHQI-FTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQVLKGLFYMH 170
IVK + ++ + ++MEY+ GSL Y+ K + R+ + + Q+ KG+ Y+
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 171 SRNIVHRDIKPANVLINEKMEHPCG----YSCLYESGEARHRKHGGYN------------ 214
++ +HRD+ N+L+ + G L + E K G +
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 191
Query: 215 ---GFAADIWSFGVTMMELYMGYYPFLEPGQEP 244
A+D+WSFGV + EL + ++E + P
Sbjct: 192 SKFSVASDVWSFGVVLYEL----FTYIEKSKSP 220
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 31/213 (14%)
Query: 59 LEKLQVLGQGNGGTVFKVRHK----QTLALYALKVMQ--CDRGTPPNPQELNILRQTNSP 112
L+ LQ LG+GN G+V R+ T + A+K +Q + +E+ IL+
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 71
Query: 113 YIVKCHQI-FTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQVLKGLFYMH 170
IVK + ++ + ++MEY+ GSL Y+ K + R+ + + Q+ KG+ Y+
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 171 SRNIVHRDIKPANVLINEKMEHPCG----YSCLYESGEARHRKHGGYN------------ 214
++ +HRD+ N+L+ + G L + E K G +
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 191
Query: 215 ---GFAADIWSFGVTMMELYMGYYPFLEPGQEP 244
A+D+WSFGV + EL+ ++E + P
Sbjct: 192 SKFSVASDVWSFGVVLYELFT----YIEKSKSP 220
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 31/213 (14%)
Query: 59 LEKLQVLGQGNGGTVFKVRHK----QTLALYALKVMQ--CDRGTPPNPQELNILRQTNSP 112
L+ LQ LG+GN G+V R+ T + A+K +Q + +E+ IL+
Sbjct: 15 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 74
Query: 113 YIVKCHQI-FTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQVLKGLFYMH 170
IVK + ++ + ++MEY+ GSL Y+ K + R+ + + Q+ KG+ Y+
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 134
Query: 171 SRNIVHRDIKPANVLINEKMEHPCG----YSCLYESGEARHRKHGGYN------------ 214
++ +HRD+ N+L+ + G L + E K G +
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 215 ---GFAADIWSFGVTMMELYMGYYPFLEPGQEP 244
A+D+WSFGV + EL+ ++E + P
Sbjct: 195 SKFSVASDVWSFGVVLYELFT----YIEKSKSP 223
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 122/276 (44%), Gaps = 61/276 (22%)
Query: 63 QVLGQGNGG-----TVFKVRHKQTLALYALKVMQCDRGTPPNPQEL----NILRQTNSPY 113
+ LG+G G T F ++ + A+K+++ + +P ++L N+L+Q N P+
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK-ENASPSELRDLLSEFNVLKQVNHPH 87
Query: 114 IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR------------------------ 149
++K + ++ G + +++EY GSL +++ +
Sbjct: 88 VIKLYGACSQ-DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 150 LSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINE--KME-HPCGYS-CLYESGEA 205
L+ + + + Q+ +G+ Y+ +VHRD+ N+L+ E KM+ G S +YE
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 206 RHRKHGG--------------YNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLM 250
R G +D+WSFGV + E+ +G P+ PG P+ L +
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY--PGIPPERLFNL 264
Query: 251 LAICFR-EPPSLPECSSEKFRDFIRCCLQKGDPSKR 285
L R E P CS E +R ++C Q +P KR
Sbjct: 265 LKTGHRMERPD--NCSEEMYRLMLQCWKQ--EPDKR 296
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 115/275 (41%), Gaps = 45/275 (16%)
Query: 60 EKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ----ELNILRQTNSPYIV 115
E L +G G+ G K+R K + K + T Q E+N+LR+ P IV
Sbjct: 9 EVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIV 68
Query: 116 KCH-QIFTKPSGEVSILMEYMDAGSLEIYV----KSRGRLSEDIICTISRQVLKGLFYMH 170
+ + +I + + + I+MEY + G L + K R L E+ + + Q+ L H
Sbjct: 69 RYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH 128
Query: 171 SRN-----IVHRDIKPANVLINEK-------------MEHPCGYSC------LYESGEAR 206
R+ ++HRD+KPANV ++ K + H ++ Y S E
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQM 188
Query: 207 HRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPP--SLPEC 264
+R YN +DIWS G + EL PF Q+ LA RE +P
Sbjct: 189 NRM--SYNE-KSDIWSLGCLLYELCALMPPFTAFSQKE------LAGKIREGKFRRIPYR 239
Query: 265 SSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299
S++ + I L D R + ++L +P + +
Sbjct: 240 YSDELNEIITRMLNLKD-YHRPSVEEILENPLILE 273
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 118/261 (45%), Gaps = 32/261 (12%)
Query: 61 KLQV-LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-PQELNILRQTNSPYIVKCH 118
+L+V LGQG G V+ T + A+K ++ +P QE ++++ +V+ +
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY 79
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSR-GR-LSEDIICTISRQVLKGLFYMHSRNIVH 176
+ ++ + I+MEYM G L ++K G+ L + ++ Q+ G+ Y+ N VH
Sbjct: 80 AVVSEEP--IYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 177 RDIKPANVLINEKM---EHPCGYSCLYESGEARHRKHG--------------GYNGFAAD 219
RD++ AN+L+ E + G + L E E R+ G +D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 220 IWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQ 278
+WSFG+ + EL G P+ PG + + +R P PEC E D + C +
Sbjct: 198 VWSFGILLTELTTKGRVPY--PGMVNREVLDQVERGYRMPCP-PEC-PESLHDLMCQCWR 253
Query: 279 KGDPSKRWTASQLLSHPFLAD 299
K DP +R T L FL D
Sbjct: 254 K-DPEERPTFEYL--QAFLED 271
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 115/275 (41%), Gaps = 45/275 (16%)
Query: 60 EKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ----ELNILRQTNSPYIV 115
E L +G G+ G K+R K + K + T Q E+N+LR+ P IV
Sbjct: 9 EVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIV 68
Query: 116 KCH-QIFTKPSGEVSILMEYMDAGSLEIYV----KSRGRLSEDIICTISRQVLKGLFYMH 170
+ + +I + + + I+MEY + G L + K R L E+ + + Q+ L H
Sbjct: 69 RYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH 128
Query: 171 SRN-----IVHRDIKPANVLINEK-------------MEHPCGYSC------LYESGEAR 206
R+ ++HRD+KPANV ++ K + H ++ Y S E
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQM 188
Query: 207 HRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPP--SLPEC 264
+R YN +DIWS G + EL PF Q+ LA RE +P
Sbjct: 189 NRM--SYNE-KSDIWSLGCLLYELCALMPPFTAFSQKE------LAGKIREGKFRRIPYR 239
Query: 265 SSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299
S++ + I L D R + ++L +P + +
Sbjct: 240 YSDELNEIITRMLNLKD-YHRPSVEEILENPLILE 273
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 119/263 (45%), Gaps = 36/263 (13%)
Query: 61 KLQV-LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-PQELNILRQTNSPYIVKCH 118
+L+V LGQG G V+ T + A+K ++ +P QE ++++ +V+ +
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY 79
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDI----ICTISRQVLKGLFYMHSRNI 174
+ ++ + I+ EYM GSL ++K G + + + + ++ Q+ G+ Y+ N
Sbjct: 80 AVVSEEP--IYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 175 VHRDIKPANVLINEKM---EHPCGYSCLYESGEARHRKHG--------------GYNGFA 217
VHRD++ AN+L+ E + G + L E E R+ G
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 218 ADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276
+D+WSFG+ + EL G P+ PG + + +R P PEC E D + C
Sbjct: 196 SDVWSFGILLTELTTKGRVPY--PGMVNREVLDQVERGYRM-PCPPEC-PESLHDLMCQC 251
Query: 277 LQKGDPSKRWTASQLLSHPFLAD 299
+K DP +R T L FL D
Sbjct: 252 WRK-DPEERPTFEYL--QAFLED 271
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 110/243 (45%), Gaps = 29/243 (11%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDR-GTPPNPQELNILRQTNSPYIVKCHQIFTK 123
LG G G V++ K+ A+K ++ D +E ++++ P +V+ + T+
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 124 PSGEVSILMEYMDAGSLEIYVK--SRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKP 181
I+ E+M G+L Y++ +R +S ++ ++ Q+ + Y+ +N +HRD+
Sbjct: 79 EP-PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAA 137
Query: 182 ANVLINEK---MEHPCGYSCLYESGEARHRKHG-------------GYNGFA--ADIWSF 223
N L+ E G S L +G+ G YN F+ +D+W+F
Sbjct: 138 RNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 196
Query: 224 GVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDP 282
GV + E+ G P+ PG +P + +L +R PE EK + +R C Q +P
Sbjct: 197 GVLLWEIATYGMSPY--PGIDPSQVYELLEKDYR--MERPEGCPEKVYELMRACWQ-WNP 251
Query: 283 SKR 285
S R
Sbjct: 252 SDR 254
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 31/213 (14%)
Query: 59 LEKLQVLGQGNGGTVFKVRHK----QTLALYALKVMQ--CDRGTPPNPQELNILRQTNSP 112
L+ LQ LG+GN G+V R+ T + A+K +Q + +E+ IL+
Sbjct: 30 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 89
Query: 113 YIVKCHQI-FTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQVLKGLFYMH 170
IVK + ++ + ++MEY+ GSL Y+ K + R+ + + Q+ KG+ Y+
Sbjct: 90 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 149
Query: 171 SRNIVHRDIKPANVLINEKMEHPCG----YSCLYESGEARHRKHGGYN------------ 214
++ +HRD+ N+L+ + G L + E K G +
Sbjct: 150 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 209
Query: 215 ---GFAADIWSFGVTMMELYMGYYPFLEPGQEP 244
A+D+WSFGV + EL + ++E + P
Sbjct: 210 SKFSVASDVWSFGVVLYEL----FTYIEKSKSP 238
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 106/252 (42%), Gaps = 32/252 (12%)
Query: 57 SQLEKLQVLGQGNGGTVFK-------VRHKQTLALYALKVMQCDRGTPPNPQELNILRQT 109
++ +K++VLG G GTV+K + K +A+ L+ + E ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFY 168
++P++ C + + V ++M+ M G L YV+ + + + Q+ KG+ Y
Sbjct: 77 DNPHV--CRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEARHRKHGG------------- 212
+ R +VHRD+ NVL+ G + L + E + GG
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 213 --YNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
+D+WS+GVT+ EL G P+ G +S +L R P P C+ + +
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPY--DGIPASEISSILEKGERLPQP-PICTIDVY 251
Query: 270 RDFIRCCLQKGD 281
++C + D
Sbjct: 252 MIMVKCWMIDAD 263
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 106/252 (42%), Gaps = 32/252 (12%)
Query: 57 SQLEKLQVLGQGNGGTVFK-------VRHKQTLALYALKVMQCDRGTPPNPQELNILRQT 109
++ +K++VLG G GTV+K + K +A+ L+ + E ++
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFY 168
++P++ C + + V ++M+ M G L YV+ + + + Q+ KG+ Y
Sbjct: 79 DNPHV--CRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 136
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEARHRKHGG------------- 212
+ R +VHRD+ NVL+ G + L + E + GG
Sbjct: 137 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 196
Query: 213 --YNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
+D+WS+GVT+ EL G P+ G +S +L R P P C+ + +
Sbjct: 197 HRIYTHQSDVWSYGVTVWELMTFGSKPY--DGIPASEISSILEKGERLPQP-PICTIDVY 253
Query: 270 RDFIRCCLQKGD 281
++C + D
Sbjct: 254 MIMVKCWMIDAD 265
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 31/213 (14%)
Query: 59 LEKLQVLGQGNGGTVFKVRHK----QTLALYALKVMQ--CDRGTPPNPQELNILRQTNSP 112
L+ LQ LG+GN G+V R+ T + A+K +Q + +E+ IL+
Sbjct: 30 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 89
Query: 113 YIVKCHQI-FTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQVLKGLFYMH 170
IVK + ++ + ++MEY+ GSL Y+ K + R+ + + Q+ KG+ Y+
Sbjct: 90 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 149
Query: 171 SRNIVHRDIKPANVLINEKMEHPCG----YSCLYESGEARHRKHGGYN------------ 214
++ +HRD+ N+L+ + G L + E K G +
Sbjct: 150 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 209
Query: 215 ---GFAADIWSFGVTMMELYMGYYPFLEPGQEP 244
A+D+WSFGV + EL + ++E + P
Sbjct: 210 SKFSVASDVWSFGVVLYEL----FTYIEKSKSP 238
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 106/252 (42%), Gaps = 32/252 (12%)
Query: 57 SQLEKLQVLGQGNGGTVFK-------VRHKQTLALYALKVMQCDRGTPPNPQELNILRQT 109
++ +K++VLG G GTV+K + K +A+ L+ + E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFY 168
++P++ C + + V ++M+ M G L YV+ + + + Q+ KG+ Y
Sbjct: 75 DNPHV--CRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEARHRKHGG------------- 212
+ R +VHRD+ NVL+ G + L + E + GG
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 213 --YNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
+D+WS+GVT+ EL G P+ G +S +L R P P C+ + +
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPY--DGIPASEISSILEKGERLPQP-PICTIDVY 249
Query: 270 RDFIRCCLQKGD 281
++C + D
Sbjct: 250 MIMVKCWMIDAD 261
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 106/252 (42%), Gaps = 32/252 (12%)
Query: 57 SQLEKLQVLGQGNGGTVFK-------VRHKQTLALYALKVMQCDRGTPPNPQELNILRQT 109
++ +K++VLG G GTV+K + K +A+ L+ + E ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFY 168
++P++ C + + V ++M+ M G L YV+ + + + Q+ KG+ Y
Sbjct: 78 DNPHV--CRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEARHRKHGG------------- 212
+ R +VHRD+ NVL+ G + L + E + GG
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 213 --YNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
+D+WS+GVT+ EL G P+ G +S +L R P P C+ + +
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPY--DGIPASEISSILEKGERLPQP-PICTIDVY 252
Query: 270 RDFIRCCLQKGD 281
++C + D
Sbjct: 253 MIMVKCWMIDAD 264
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 106/252 (42%), Gaps = 32/252 (12%)
Query: 57 SQLEKLQVLGQGNGGTVFK-------VRHKQTLALYALKVMQCDRGTPPNPQELNILRQT 109
++ +K++VLG G GTV+K + K +A+ L+ + E ++
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFY 168
++P++ C + + V ++M+ M G L YV+ + + + Q+ KG+ Y
Sbjct: 76 DNPHV--CRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 133
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEARHRKHGG------------- 212
+ R +VHRD+ NVL+ G + L + E + GG
Sbjct: 134 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 193
Query: 213 --YNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
+D+WS+GVT+ EL G P+ G +S +L R P P C+ + +
Sbjct: 194 HRIYTHQSDVWSYGVTVWELMTFGSKPY--DGIPASEISSILEKGERLPQP-PICTIDVY 250
Query: 270 RDFIRCCLQKGD 281
++C + D
Sbjct: 251 MIMVKCWMIDAD 262
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 126/321 (39%), Gaps = 66/321 (20%)
Query: 35 PVSCPNLVHTEAASYGQEIDGLS-QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCD 93
P+ PN V AS G+ + +V+G G+ G VF+ + ++ + KV+Q
Sbjct: 17 PLDDPNKVIKVLASDGKTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK 76
Query: 94 RGTPPNPQELNILRQTNSPYIVKCHQIF-----TKPSGEVSILMEYMDAGSLEI---YVK 145
R +EL I+R P +V F K +++++EY+ Y K
Sbjct: 77 RF---KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAK 133
Query: 146 SRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEA 205
+ + +I Q+L+ L Y+HS I HRDIKP N+L ++ P G L + G A
Sbjct: 134 LKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLL----LDPPSGVLKLIDFGSA 189
Query: 206 RHRKHGGYNG--------------FAA-------DIWSFGVTMMELYMGYYPFLEPGQEP 244
+ G N F A DIWS G M EL G F PG+
Sbjct: 190 KILIAGEPNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLF--PGESG 247
Query: 245 -DFLSLMLAIC-----------------FREPPSLPECSSEKFR--------DFIRCCLQ 278
D L ++ + + P P S+ FR D I L+
Sbjct: 248 IDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLE 307
Query: 279 KGDPSKRWTASQLLSHPFLAD 299
PS R TA + L HPF +
Sbjct: 308 YT-PSARLTAIEALCHPFFDE 327
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 119/263 (45%), Gaps = 36/263 (13%)
Query: 61 KLQV-LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-PQELNILRQTNSPYIVKCH 118
+L+V LGQG G V+ T + A+K ++ +P QE ++++ +V+ +
Sbjct: 10 RLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY 68
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDI----ICTISRQVLKGLFYMHSRNI 174
+ ++ + I+ EYM GSL ++K G + + + + ++ Q+ G+ Y+ N
Sbjct: 69 AVVSEEP--IYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVERMNY 124
Query: 175 VHRDIKPANVLINEKM---EHPCGYSCLYESGEARHRKHG--------------GYNGFA 217
VHRD++ AN+L+ E + G + L E E R+ G
Sbjct: 125 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 184
Query: 218 ADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276
+D+WSFG+ + EL G P+ PG + + +R P PEC E D + C
Sbjct: 185 SDVWSFGILLTELTTKGRVPY--PGMVNREVLDQVERGYRM-PCPPEC-PESLHDLMCQC 240
Query: 277 LQKGDPSKRWTASQLLSHPFLAD 299
+K DP +R T L FL D
Sbjct: 241 WRK-DPEERPTFEYL--QAFLED 260
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 119/263 (45%), Gaps = 36/263 (13%)
Query: 61 KLQV-LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-PQELNILRQTNSPYIVKCH 118
+L+V LGQG G V+ T + A+K ++ +P QE ++++ +V+ +
Sbjct: 12 RLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY 70
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDI----ICTISRQVLKGLFYMHSRNI 174
+ ++ + I+ EYM GSL ++K G + + + + ++ Q+ G+ Y+ N
Sbjct: 71 AVVSEEP--IYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVERMNY 126
Query: 175 VHRDIKPANVLINEKM---EHPCGYSCLYESGEARHRKHG--------------GYNGFA 217
VHRD++ AN+L+ E + G + L E E R+ G
Sbjct: 127 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 218 ADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276
+D+WSFG+ + EL G P+ PG + + +R P PEC E D + C
Sbjct: 187 SDVWSFGILLTELTTKGRVPY--PGMVNREVLDQVERGYRM-PCPPEC-PESLHDLMCQC 242
Query: 277 LQKGDPSKRWTASQLLSHPFLAD 299
+K DP +R T L FL D
Sbjct: 243 WRK-DPEERPTFEYL--QAFLED 262
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 96/213 (45%), Gaps = 31/213 (14%)
Query: 59 LEKLQVLGQGNGGTVFKVRHK----QTLALYALKVMQ--CDRGTPPNPQELNILRQTNSP 112
L+ LQ LG+GN G+V R+ T + A+K +Q + +E+ IL+
Sbjct: 15 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 74
Query: 113 YIVKCHQI-FTKPSGEVSILMEYMDAGSLEIYVKSRG-RLSEDIICTISRQVLKGLFYMH 170
IVK + ++ + ++MEY+ GSL Y+++ R+ + + Q+ KG+ Y+
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLG 134
Query: 171 SRNIVHRDIKPANVLINEKMEHPCG----YSCLYESGEARHRKHGGYN------------ 214
++ +HRD+ N+L+ + G L + E K G +
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 215 ---GFAADIWSFGVTMMELYMGYYPFLEPGQEP 244
A+D+WSFGV + EL+ ++E + P
Sbjct: 195 SKFSVASDVWSFGVVLYELFT----YIEKSKSP 223
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 113/275 (41%), Gaps = 45/275 (16%)
Query: 60 EKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ----ELNILRQTNSPYIV 115
E L +G G+ G K+R K + K + T Q E+N+LR+ P IV
Sbjct: 9 EVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIV 68
Query: 116 KCH-QIFTKPSGEVSILMEYMDAGSLEIYV----KSRGRLSEDIICTISRQVLKGLFYMH 170
+ + +I + + + I+MEY + G L + K R L E+ + + Q+ L H
Sbjct: 69 RYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH 128
Query: 171 SRN-----IVHRDIKPANVLINEKMEHPCGYSCL-------------------YESGEAR 206
R+ ++HRD+KPANV ++ K G L Y S E
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQM 188
Query: 207 HRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPP--SLPEC 264
+R YN +DIWS G + EL PF Q+ LA RE +P
Sbjct: 189 NRM--SYNE-KSDIWSLGCLLYELCALMPPFTAFSQKE------LAGKIREGKFRRIPYR 239
Query: 265 SSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299
S++ + I L D R + ++L +P + +
Sbjct: 240 YSDELNEIITRMLNLKD-YHRPSVEEILENPLILE 273
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 122/276 (44%), Gaps = 61/276 (22%)
Query: 63 QVLGQGNGG-----TVFKVRHKQTLALYALKVMQCDRGTPPNPQEL----NILRQTNSPY 113
+ LG+G G T F ++ + A+K+++ + +P ++L N+L+Q N P+
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK-ENASPSELRDLLSEFNVLKQVNHPH 87
Query: 114 IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR------------------------ 149
++K + ++ G + +++EY GSL +++ +
Sbjct: 88 VIKLYGACSQ-DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 150 LSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINE--KME-HPCGYS-CLYESGEA 205
L+ + + + Q+ +G+ Y+ +VHRD+ N+L+ E KM+ G S +YE
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY 206
Query: 206 RHRKHGG--------------YNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLM 250
R G +D+WSFGV + E+ +G P+ PG P+ L +
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY--PGIPPERLFNL 264
Query: 251 LAICFR-EPPSLPECSSEKFRDFIRCCLQKGDPSKR 285
L R E P CS E +R ++C Q +P KR
Sbjct: 265 LKTGHRMERPD--NCSEEMYRLMLQCWKQ--EPDKR 296
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 118/263 (44%), Gaps = 36/263 (13%)
Query: 61 KLQV-LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-PQELNILRQTNSPYIVKCH 118
+L+V LGQG G V+ T + A+K ++ +P QE ++++ +V+ +
Sbjct: 188 RLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLY 246
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDI----ICTISRQVLKGLFYMHSRNI 174
+ ++ + I+ EYM GSL ++K G + + + + ++ Q+ G+ Y+ N
Sbjct: 247 AVVSEEP--IYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVERMNY 302
Query: 175 VHRDIKPANVLINEKM---EHPCGYSCLYESGEARHRKHG--------------GYNGFA 217
VHRD++ AN+L+ E + G L E E R+ G
Sbjct: 303 VHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 362
Query: 218 ADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276
+D+WSFG+ + EL G P+ PG + + +R P PEC E D + C
Sbjct: 363 SDVWSFGILLTELTTKGRVPY--PGMVNREVLDQVERGYRMPCP-PEC-PESLHDLMCQC 418
Query: 277 LQKGDPSKRWTASQLLSHPFLAD 299
+K DP +R T L FL D
Sbjct: 419 WRK-DPEERPTFEYL--QAFLED 438
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 105/235 (44%), Gaps = 25/235 (10%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQIFTKP 124
LG G G V+ + + + + +E N+++ +V+ + + TK
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKE 79
Query: 125 SGEVSILMEYMDAGSLEIYVKSR--GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPA 182
+ I+ E+M GSL ++KS G++ + S Q+ +G+ Y+ +N +HRD++ A
Sbjct: 80 E-PIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAA 138
Query: 183 NVLINEKME---HPCGYSCLYESGEARHRKHG--------------GYNGFAADIWSFGV 225
NVL++E + G + + E E R+ G +++WSFG+
Sbjct: 139 NVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGI 198
Query: 226 TMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQK 279
+ E+ G P+ PG+ + L+ +R P + C E + D ++ C ++
Sbjct: 199 LLYEIVTYGKIPY--PGRTNADVMSALSQGYR-MPRMENCPDELY-DIMKMCWKE 249
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 106/252 (42%), Gaps = 32/252 (12%)
Query: 57 SQLEKLQVLGQGNGGTVFK-------VRHKQTLALYALKVMQCDRGTPPNPQELNILRQT 109
++ +K++VLG G GTV+K + K +A+ L+ + E ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFY 168
++P++ C + + V ++M+ M G L YV+ + + + Q+ KG+ Y
Sbjct: 77 DNPHV--CRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEARHRKHGG------------- 212
+ R +VHRD+ NVL+ G + L + E + GG
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 213 --YNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
+D+WS+GVT+ EL G P+ G +S +L R P P C+ + +
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPY--DGIPASEISSILEKGERLPQP-PICTIDVY 251
Query: 270 RDFIRCCLQKGD 281
++C + D
Sbjct: 252 MIMVKCWMIDAD 263
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 118/263 (44%), Gaps = 36/263 (13%)
Query: 61 KLQV-LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-PQELNILRQTNSPYIVKCH 118
+L+V LGQG G V+ T + A+K ++ +P QE ++++ +V+ +
Sbjct: 11 RLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY 69
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRG----RLSEDIICTISRQVLKGLFYMHSRNI 174
+ ++ + I+ EYM GSL ++K RL + + ++ Q+ G+ Y+ N
Sbjct: 70 AVVSEEP--IXIVTEYMSKGSLLDFLKGETGKYLRLPQ--LVDMAAQIASGMAYVERMNY 125
Query: 175 VHRDIKPANVLINEKM---EHPCGYSCLYESGEARHRKHG--------------GYNGFA 217
VHRD++ AN+L+ E + G + L E E R+ G
Sbjct: 126 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 185
Query: 218 ADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276
+D+WSFG+ + EL G P+ PG + + +R P PEC E D + C
Sbjct: 186 SDVWSFGILLTELTTKGRVPY--PGMVNREVLDQVERGYRM-PCPPEC-PESLHDLMCQC 241
Query: 277 LQKGDPSKRWTASQLLSHPFLAD 299
+K +P +R T L FL D
Sbjct: 242 WRK-EPEERPTFEYL--QAFLED 261
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 106/252 (42%), Gaps = 32/252 (12%)
Query: 57 SQLEKLQVLGQGNGGTVFK-------VRHKQTLALYALKVMQCDRGTPPNPQELNILRQT 109
++ +K++VLG G GTV+K + K +A+ L+ + E ++
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFY 168
++P++ C + + V ++M+ M G L YV+ + + + Q+ KG+ Y
Sbjct: 79 DNPHV--CRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 136
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEARHRKHGG------------- 212
+ R +VHRD+ NVL+ G + L + E + GG
Sbjct: 137 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 196
Query: 213 --YNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
+D+WS+GVT+ EL G P+ G +S +L R P P C+ + +
Sbjct: 197 HRIYTHQSDVWSYGVTVWELMTFGSKPY--DGIPASEISSILEKGERLPQP-PICTIDVY 253
Query: 270 RDFIRCCLQKGD 281
++C + D
Sbjct: 254 MIMVKCWMIDAD 265
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 111/244 (45%), Gaps = 31/244 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDR-GTPPNPQELNILRQTNSPYIVKCHQIFTK 123
LG G G V++ K+ A+K ++ D +E ++++ P +V+ + T+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 124 PSGEVSILMEYMDAGSLEIYVK--SRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKP 181
I+ E+M G+L Y++ +R +S ++ ++ Q+ + Y+ +N +HRD+
Sbjct: 79 EP-PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAA 137
Query: 182 ANVLINEK---MEHPCGYSCLYESGEARHRKHGG--------------YNGFA--ADIWS 222
N L+ E G S L +G+ H G YN F+ +D+W+
Sbjct: 138 RNCLVGENHLVKVADFGLSRLM-TGDT-FTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 195
Query: 223 FGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGD 281
FGV + E+ G P+ PG +P + +L +R PE EK + +R C Q +
Sbjct: 196 FGVLLWEIATYGMSPY--PGIDPSQVYELLEKDYR--MERPEGCPEKVYELMRACWQ-WN 250
Query: 282 PSKR 285
PS R
Sbjct: 251 PSDR 254
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 86/197 (43%), Gaps = 26/197 (13%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQIFTKP 124
LG+G+ G V +++ KQT A+K ++ + +EL +SP IV + +
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLE---VFRVEELVACAGLSSPRIVPLYGA-VRE 135
Query: 125 SGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANV 184
V+I ME ++ GSL +K G L ED Q L+GL Y+H+R I+H D+K NV
Sbjct: 136 GPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNV 195
Query: 185 LINEKMEHP--CGYS---CLYESGEARHRKHGGY-----------------NGFAADIWS 222
L++ C + CL G + G Y DIWS
Sbjct: 196 LLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWS 255
Query: 223 FGVTMMELYMGYYPFLE 239
M+ + G +P+ +
Sbjct: 256 SCCMMLHMLNGCHPWTQ 272
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 9/192 (4%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTV---FKVRHKQTLALYALKVMQCDRGTPPNPQELNIL 106
GQ D + L +G+G G V + +K +A+ + + +E+ IL
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKIL 79
Query: 107 RQTNSPYIVKCHQIFTKPSGE----VSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQV 162
+ I+ + I P+ E V I+ + M+ ++ +K++ LS D IC Q+
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQ-HLSNDHICYFLYQI 137
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFAADIWS 222
L+GL Y+HS N++HRD+KP+N+L+N + L + H G + A W
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 223 FGVTMMELYMGY 234
+M GY
Sbjct: 198 RAPEIMLNSKGY 209
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 9/192 (4%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTV---FKVRHKQTLALYALKVMQCDRGTPPNPQELNIL 106
GQ D + L +G+G G V + +K +A+ + + +E+ IL
Sbjct: 16 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 107 RQTNSPYIVKCHQIFTKPSGE----VSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQV 162
+ I+ + I P+ E V I+ + M+ ++ +K++ LS D IC Q+
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQ-HLSNDHICYFLYQI 133
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFAADIWS 222
L+GL Y+HS N++HRD+KP+N+L+N + L + H G + A W
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWY 193
Query: 223 FGVTMMELYMGY 234
+M GY
Sbjct: 194 RAPEIMLNSKGY 205
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 118/261 (45%), Gaps = 32/261 (12%)
Query: 61 KLQV-LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-PQELNILRQTNSPYIVKCH 118
+L+V LGQG G V+ T + A+K ++ +P QE ++++ +V+ +
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY 79
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSR-GR-LSEDIICTISRQVLKGLFYMHSRNIVH 176
+ ++ + I+ EYM GSL ++K G+ L + ++ Q+ G+ Y+ N VH
Sbjct: 80 AVVSEEP--IYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 177 RDIKPANVLINEKM---EHPCGYSCLYESGEARHRKHG--------------GYNGFAAD 219
RD++ AN+L+ E + G + L E E R+ G +D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 220 IWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQ 278
+WSFG+ + EL G P+ PG + + +R P PEC E D + C +
Sbjct: 198 VWSFGILLTELTTKGRVPY--PGMVNREVLDQVERGYRM-PCPPEC-PESLHDLMCQCWR 253
Query: 279 KGDPSKRWTASQLLSHPFLAD 299
K DP +R T L FL D
Sbjct: 254 K-DPEERPTFEYL--QAFLED 271
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 9/192 (4%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTV---FKVRHKQTLALYALKVMQCDRGTPPNPQELNIL 106
GQ D + L +G+G G V + +K +A+ + + +E+ IL
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 79
Query: 107 RQTNSPYIVKCHQIFTKPSGE----VSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQV 162
+ I+ + I P+ E V I+ + M+ ++ +K++ LS D IC Q+
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQ-HLSNDHICYFLYQI 137
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFAADIWS 222
L+GL Y+HS N++HRD+KP+N+L+N + L + H G + A W
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 223 FGVTMMELYMGY 234
+M GY
Sbjct: 198 RAPEIMLNSKGY 209
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 31/213 (14%)
Query: 59 LEKLQVLGQGNGGTVFKVRHK----QTLALYALKVMQ--CDRGTPPNPQELNILRQTNSP 112
L+ LQ LG+GN G+V R+ T + A+K +Q + +E+ IL+
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 71
Query: 113 YIVKCHQI-FTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQVLKGLFYMH 170
IVK + ++ + ++MEY+ GSL Y+ K + R+ + + Q+ KG+ Y+
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 171 SRNIVHRDIKPANVLINEKMEHPCG----YSCLYESGEARHRKHGGYN------------ 214
++ +HRD+ N+L+ + G L + E K G +
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTE 191
Query: 215 ---GFAADIWSFGVTMMELYMGYYPFLEPGQEP 244
A+D+WSFGV + EL+ ++E + P
Sbjct: 192 SKFSVASDVWSFGVVLYELFT----YIEKSKSP 220
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 108/258 (41%), Gaps = 43/258 (16%)
Query: 57 SQLEKLQVLGQGNGGTVFK-------VRHKQTLALYALKVMQCDRGTPPNPQELNILRQT 109
++ +K++VLG G GTV+K + K +A+ L+ + E ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFY 168
++P++ C + + V ++M+ M G L YV+ + + + Q+ KG+ Y
Sbjct: 77 DNPHV--CRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEARHRKHGG------------- 212
+ R +VHRD+ NVL+ G + L + E + GG
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 213 --YNGFAADIWSFGVTMMELY-MGYYPF-----------LEPGQ---EPDFLSLMLAICF 255
+D+WS+GVT+ EL G P+ LE G+ +P ++ + +
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIM 254
Query: 256 REPPSLPECSSEKFRDFI 273
R+ + S KFR+ I
Sbjct: 255 RKCWMIDADSRPKFRELI 272
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 9/192 (4%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTV---FKVRHKQTLALYALKVMQCDRGTPPNPQELNIL 106
GQ D + L +G+G G V + +K +A+ + + +E+ IL
Sbjct: 16 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 107 RQTNSPYIVKCHQIFTKPSGE----VSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQV 162
+ I+ + I P+ E V I+ + M+ ++ +K++ LS D IC Q+
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQ-HLSNDHICYFLYQI 133
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFAADIWS 222
L+GL Y+HS N++HRD+KP+N+L+N + L + H G + A W
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY 193
Query: 223 FGVTMMELYMGY 234
+M GY
Sbjct: 194 RAPEIMLNSKGY 205
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 118/263 (44%), Gaps = 36/263 (13%)
Query: 61 KLQV-LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-PQELNILRQTNSPYIVKCH 118
+L+V LGQG G V+ T + A+K ++ +P QE ++++ +V+ +
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY 79
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDI----ICTISRQVLKGLFYMHSRNI 174
+ ++ + I+ EYM GSL ++K G + + + + ++ Q+ G+ Y+ N
Sbjct: 80 AVVSEEP--IYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 175 VHRDIKPANVLINEKM---EHPCGYSCLYESGEARHRKHG--------------GYNGFA 217
VHRD+ AN+L+ E + G + L E E R+ G
Sbjct: 136 VHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 218 ADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276
+D+WSFG+ + EL G P+ PG + + +R P PEC E D + C
Sbjct: 196 SDVWSFGILLTELTTKGRVPY--PGMVNREVLDQVERGYRM-PCPPEC-PESLHDLMCQC 251
Query: 277 LQKGDPSKRWTASQLLSHPFLAD 299
+K DP +R T L FL D
Sbjct: 252 WRK-DPEERPTFEYL--QAFLED 271
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 9/192 (4%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTV---FKVRHKQTLALYALKVMQCDRGTPPNPQELNIL 106
GQ D + L +G+G G V + +K +A+ + + +E+ IL
Sbjct: 16 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 107 RQTNSPYIVKCHQIFTKPSGE----VSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQV 162
+ I+ + I P+ E V I+ + M+ ++ +K++ LS D IC Q+
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQ-HLSNDHICYFLYQI 133
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFAADIWS 222
L+GL Y+HS N++HRD+KP+N+L+N + L + H G + A W
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY 193
Query: 223 FGVTMMELYMGY 234
+M GY
Sbjct: 194 RAPEIMLNSKGY 205
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 98/244 (40%), Gaps = 27/244 (11%)
Query: 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQ----CDRG-TPPNPQELNILRQTNSP 112
E L+V+G+G G V V+ K ++A+K++ R T +E ++L +S
Sbjct: 75 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSK 134
Query: 113 YIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSR 172
+I H F + ++ Y+ L + K RL E++ +++ + +H
Sbjct: 135 WITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL 194
Query: 173 NIVHRDIKPANVL--INEKMEHPCGYSCL------------------YESGEARHRKHGG 212
+ VHRDIKP N+L +N + SCL Y S E GG
Sbjct: 195 HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGG 254
Query: 213 YNGFA--ADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFR 270
+ D WS GV M E+ G PF + +M + P+ SE +
Sbjct: 255 KGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAK 314
Query: 271 DFIR 274
D IR
Sbjct: 315 DLIR 318
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 9/192 (4%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTV---FKVRHKQTLALYALKVMQCDRGTPPNPQELNIL 106
GQ D + L +G+G G V + +K +A+ + + +E+ IL
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKIL 79
Query: 107 RQTNSPYIVKCHQIFTKPSGE----VSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQV 162
+ I+ + I P+ E V I+ + M+ ++ +K++ LS D IC Q+
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQ-HLSNDHICYFLYQI 137
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFAADIWS 222
L+GL Y+HS N++HRD+KP+N+L+N + L + H G + A W
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 223 FGVTMMELYMGY 234
+M GY
Sbjct: 198 RAPEIMLNSKGY 209
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 9/192 (4%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTV---FKVRHKQTLALYALKVMQCDRGTPPNPQELNIL 106
GQ D + L +G+G G V + +K +A+ + + +E+ IL
Sbjct: 21 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 80
Query: 107 RQTNSPYIVKCHQIFTKPSGE----VSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQV 162
+ I+ + I P+ E V I+ + M+ ++ +K++ LS D IC Q+
Sbjct: 81 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQ-HLSNDHICYFLYQI 138
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFAADIWS 222
L+GL Y+HS N++HRD+KP+N+L+N + L + H G + A W
Sbjct: 139 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 198
Query: 223 FGVTMMELYMGY 234
+M GY
Sbjct: 199 RAPEIMLNSKGY 210
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 9/192 (4%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTV---FKVRHKQTLALYALKVMQCDRGTPPNPQELNIL 106
GQ D + L +G+G G V + +K +A+ + + +E+ IL
Sbjct: 22 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 81
Query: 107 RQTNSPYIVKCHQIFTKPSGE----VSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQV 162
+ I+ + I P+ E V I+ + M+ ++ +K++ LS D IC Q+
Sbjct: 82 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQ-HLSNDHICYFLYQI 139
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFAADIWS 222
L+GL Y+HS N++HRD+KP+N+L+N + L + H G + A W
Sbjct: 140 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 199
Query: 223 FGVTMMELYMGY 234
+M GY
Sbjct: 200 RAPEIMLNSKGY 211
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 9/192 (4%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTV---FKVRHKQTLALYALKVMQCDRGTPPNPQELNIL 106
GQ D + L +G+G G V + +K +A+ + + +E+ IL
Sbjct: 13 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 72
Query: 107 RQTNSPYIVKCHQIFTKPSGE----VSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQV 162
+ I+ + I P+ E V I+ + M+ ++ +K++ LS D IC Q+
Sbjct: 73 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQ-HLSNDHICYFLYQI 130
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFAADIWS 222
L+GL Y+HS N++HRD+KP+N+L+N + L + H G + A W
Sbjct: 131 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 190
Query: 223 FGVTMMELYMGY 234
+M GY
Sbjct: 191 RAPEIMLNSKGY 202
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 9/192 (4%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTV---FKVRHKQTLALYALKVMQCDRGTPPNPQELNIL 106
GQ D + L +G+G G V + +K +A+ + + +E+ IL
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 79
Query: 107 RQTNSPYIVKCHQIFTKPSGE----VSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQV 162
+ I+ + I P+ E V I+ + M+ ++ +K++ LS D IC Q+
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQ-HLSNDHICYFLYQI 137
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFAADIWS 222
L+GL Y+HS N++HRD+KP+N+L+N + L + H G + A W
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 223 FGVTMMELYMGY 234
+M GY
Sbjct: 198 RAPEIMLNSKGY 209
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 9/192 (4%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTV---FKVRHKQTLALYALKVMQCDRGTPPNPQELNIL 106
GQ D + L +G+G G V + +K +A+ + + +E+ IL
Sbjct: 14 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 73
Query: 107 RQTNSPYIVKCHQIFTKPSGE----VSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQV 162
+ I+ + I P+ E V I+ + M+ ++ +K++ LS D IC Q+
Sbjct: 74 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQ-HLSNDHICYFLYQI 131
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFAADIWS 222
L+GL Y+HS N++HRD+KP+N+L+N + L + H G + A W
Sbjct: 132 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 191
Query: 223 FGVTMMELYMGY 234
+M GY
Sbjct: 192 RAPEIMLNSKGY 203
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 9/192 (4%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTV---FKVRHKQTLALYALKVMQCDRGTPPNPQELNIL 106
GQ D + L +G+G G V + +K +A+ + + +E+ IL
Sbjct: 14 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 73
Query: 107 RQTNSPYIVKCHQIFTKPSGE----VSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQV 162
+ I+ + I P+ E V I+ + M+ ++ +K++ LS D IC Q+
Sbjct: 74 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQ-HLSNDHICYFLYQI 131
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFAADIWS 222
L+GL Y+HS N++HRD+KP+N+L+N + L + H G + A W
Sbjct: 132 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 191
Query: 223 FGVTMMELYMGY 234
+M GY
Sbjct: 192 RAPEIMLNSKGY 203
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 9/192 (4%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTV---FKVRHKQTLALYALKVMQCDRGTPPNPQELNIL 106
GQ D + L +G+G G V + +K +A+ + + +E+ IL
Sbjct: 16 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 107 RQTNSPYIVKCHQIFTKPSGE----VSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQV 162
+ I+ + I P+ E V I+ + M+ ++ +K++ LS D IC Q+
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQ-HLSNDHICYFLYQI 133
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFAADIWS 222
L+GL Y+HS N++HRD+KP+N+L+N + L + H G + A W
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 193
Query: 223 FGVTMMELYMGY 234
+M GY
Sbjct: 194 RAPEIMLNSKGY 205
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 9/192 (4%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTV---FKVRHKQTLALYALKVMQCDRGTPPNPQELNIL 106
GQ D + L +G+G G V + +K +A+ + + +E+ IL
Sbjct: 36 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 95
Query: 107 RQTNSPYIVKCHQIFTKPSGE----VSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQV 162
+ I+ + I P+ E V I+ + M+ ++ +K++ LS D IC Q+
Sbjct: 96 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQ-HLSNDHICYFLYQI 153
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFAADIWS 222
L+GL Y+HS N++HRD+KP+N+L+N + L + H G + A W
Sbjct: 154 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 213
Query: 223 FGVTMMELYMGY 234
+M GY
Sbjct: 214 RAPEIMLNSKGY 225
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 118/263 (44%), Gaps = 36/263 (13%)
Query: 61 KLQV-LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-PQELNILRQTNSPYIVKCH 118
+L+V LGQG G V+ T + A+K ++ +P QE ++++ +V+ +
Sbjct: 270 RLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY 328
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRG----RLSEDIICTISRQVLKGLFYMHSRNI 174
+ ++ + I+ EYM GSL ++K RL + + ++ Q+ G+ Y+ N
Sbjct: 329 AVVSEEP--IYIVTEYMSKGSLLDFLKGETGKYLRLPQ--LVDMAAQIASGMAYVERMNY 384
Query: 175 VHRDIKPANVLINEKM---EHPCGYSCLYESGEARHRKHG--------------GYNGFA 217
VHRD++ AN+L+ E + G + L E E R+ G
Sbjct: 385 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 444
Query: 218 ADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276
+D+WSFG+ + EL G P+ PG + + +R P PEC E D + C
Sbjct: 445 SDVWSFGILLTELTTKGRVPY--PGMVNREVLDQVERGYRM-PCPPEC-PESLHDLMCQC 500
Query: 277 LQKGDPSKRWTASQLLSHPFLAD 299
+K +P +R T L FL D
Sbjct: 501 WRK-EPEERPTFEYL--QAFLED 520
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 118/263 (44%), Gaps = 36/263 (13%)
Query: 61 KLQV-LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-PQELNILRQTNSPYIVKCH 118
+L+V LGQG G V+ T + A+K ++ +P QE ++++ +V+ +
Sbjct: 14 RLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY 72
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRG----RLSEDIICTISRQVLKGLFYMHSRNI 174
+ ++ + I+ EYM GSL ++K RL + + ++ Q+ G+ Y+ N
Sbjct: 73 AVVSEEP--IYIVTEYMSKGSLLDFLKGETGKYLRLPQ--LVDMAAQIASGMAYVERMNY 128
Query: 175 VHRDIKPANVLINEKM---EHPCGYSCLYESGEARHRKHG--------------GYNGFA 217
VHRD++ AN+L+ E + G + L E E R+ G
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 188
Query: 218 ADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276
+D+WSFG+ + EL G P+ PG + + +R P PEC E D + C
Sbjct: 189 SDVWSFGILLTELTTKGRVPY--PGMVNREVLDQVERGYRM-PCPPEC-PESLHDLMCQC 244
Query: 277 LQKGDPSKRWTASQLLSHPFLAD 299
+K +P +R T L FL D
Sbjct: 245 WRK-EPEERPTFEYL--QAFLED 264
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 86/197 (43%), Gaps = 26/197 (13%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQIFTKP 124
+G+G+ G V +++ KQT A+K ++ + +EL +SP IV + +
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLE---VFRVEELVACAGLSSPRIVPLYGA-VRE 121
Query: 125 SGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANV 184
V+I ME ++ GSL +K G L ED Q L+GL Y+H+R I+H D+K NV
Sbjct: 122 GPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNV 181
Query: 185 LINEKMEHP--CGYS---CLYESGEARHRKHGGY-----------------NGFAADIWS 222
L++ C + CL G + G Y DIWS
Sbjct: 182 LLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWS 241
Query: 223 FGVTMMELYMGYYPFLE 239
M+ + G +P+ +
Sbjct: 242 SCCMMLHMLNGCHPWTQ 258
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 9/192 (4%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTV---FKVRHKQTLALYALKVMQCDRGTPPNPQELNIL 106
GQ D + L +G+G G V + +K +A+ + + +E+ IL
Sbjct: 24 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 83
Query: 107 RQTNSPYIVKCHQIFTKPSGE----VSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQV 162
+ I+ + I P+ E V I+ + M+ ++ +K++ LS D IC Q+
Sbjct: 84 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQ-HLSNDHICYFLYQI 141
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFAADIWS 222
L+GL Y+HS N++HRD+KP+N+L+N + L + H G + A W
Sbjct: 142 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 201
Query: 223 FGVTMMELYMGY 234
+M GY
Sbjct: 202 RAPEIMLNSKGY 213
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 9/192 (4%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTV---FKVRHKQTLALYALKVMQCDRGTPPNPQELNIL 106
GQ D + L +G+G G V + +K +A+ + + +E+ IL
Sbjct: 16 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 107 RQTNSPYIVKCHQIFTKPSGE----VSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQV 162
+ I+ + I P+ E V I+ + M+ ++ +K++ LS D IC Q+
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQ-HLSNDHICYFLYQI 133
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFAADIWS 222
L+GL Y+HS N++HRD+KP+N+L+N + L + H G + A W
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 193
Query: 223 FGVTMMELYMGY 234
+M GY
Sbjct: 194 RAPEIMLNSKGY 205
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 9/192 (4%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTV---FKVRHKQTLALYALKVMQCDRGTPPNPQELNIL 106
GQ D + L +G+G G V + +K +A+ + + +E+ IL
Sbjct: 18 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 77
Query: 107 RQTNSPYIVKCHQIFTKPSGE----VSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQV 162
+ I+ + I P+ E V I+ + M+ ++ +K++ LS D IC Q+
Sbjct: 78 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQ-HLSNDHICYFLYQI 135
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFAADIWS 222
L+GL Y+HS N++HRD+KP+N+L+N + L + H G + A W
Sbjct: 136 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 195
Query: 223 FGVTMMELYMGY 234
+M GY
Sbjct: 196 RAPEIMLNSKGY 207
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 126/283 (44%), Gaps = 31/283 (10%)
Query: 26 LVTQLNIPKPVSCPNLVHTEAASYGQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALY 85
L+T L+ P P ++ + +Y + + + LG G G V++ K+
Sbjct: 189 LITTLHYPAPKRNKPTIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTV 248
Query: 86 ALKVMQCDR-GTPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYV 144
A+K ++ D +E ++++ P +V+ + T+ I+ E+M G+L Y+
Sbjct: 249 AVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-PFYIITEFMTYGNLLDYL 307
Query: 145 K--SRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEK---MEHPCGYSCL 199
+ +R +S ++ ++ Q+ + Y+ +N +HR++ N L+ E G S L
Sbjct: 308 RECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRL 367
Query: 200 YESGEARHRKHGG--------------YNGFA--ADIWSFGVTMMELYM-GYYPFLEPGQ 242
+G+ + H G YN F+ +D+W+FGV + E+ G P+ PG
Sbjct: 368 M-TGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY--PGI 423
Query: 243 EPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKR 285
+ + +L +R PE EK + +R C Q +PS R
Sbjct: 424 DLSQVYELLEKDYR--MERPEGCPEKVYELMRACWQ-WNPSDR 463
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 86/197 (43%), Gaps = 26/197 (13%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQIFTKP 124
+G+G+ G V +++ KQT A+K ++ + +EL +SP IV + +
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLE---VFRVEELVACAGLSSPRIVPLYGA-VRE 137
Query: 125 SGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANV 184
V+I ME ++ GSL +K G L ED Q L+GL Y+H+R I+H D+K NV
Sbjct: 138 GPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNV 197
Query: 185 LINEKMEHP--CGYS---CLYESGEARHRKHGGY-----------------NGFAADIWS 222
L++ C + CL G + G Y DIWS
Sbjct: 198 LLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWS 257
Query: 223 FGVTMMELYMGYYPFLE 239
M+ + G +P+ +
Sbjct: 258 SCCMMLHMLNGCHPWTQ 274
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 118/263 (44%), Gaps = 36/263 (13%)
Query: 61 KLQV-LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-PQELNILRQTNSPYIVKCH 118
+L+V LGQG G V+ T + A+K ++ +P QE ++++ +V+ +
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY 245
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRG----RLSEDIICTISRQVLKGLFYMHSRNI 174
+ ++ + I+ EYM GSL ++K RL + + ++ Q+ G+ Y+ N
Sbjct: 246 AVVSEEP--IYIVTEYMSKGSLLDFLKGETGKYLRLPQ--LVDMAAQIASGMAYVERMNY 301
Query: 175 VHRDIKPANVLINEKM---EHPCGYSCLYESGEARHRKHG--------------GYNGFA 217
VHRD++ AN+L+ E + G + L E E R+ G
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 218 ADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276
+D+WSFG+ + EL G P+ PG + + +R P PEC E D + C
Sbjct: 362 SDVWSFGILLTELTTKGRVPY--PGMVNREVLDQVERGYRMPCP-PEC-PESLHDLMCQC 417
Query: 277 LQKGDPSKRWTASQLLSHPFLAD 299
+K +P +R T L FL D
Sbjct: 418 WRK-EPEERPTFEYL--QAFLED 437
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 118/263 (44%), Gaps = 36/263 (13%)
Query: 61 KLQV-LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-PQELNILRQTNSPYIVKCH 118
+L+V LGQG G V+ T + A+K ++ +P QE ++++ +V+ +
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY 245
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRG----RLSEDIICTISRQVLKGLFYMHSRNI 174
+ ++ + I+ EYM GSL ++K RL + + ++ Q+ G+ Y+ N
Sbjct: 246 AVVSEEP--IYIVTEYMSKGSLLDFLKGETGKYLRLPQ--LVDMAAQIASGMAYVERMNY 301
Query: 175 VHRDIKPANVLINEKM---EHPCGYSCLYESGEARHRKHG--------------GYNGFA 217
VHRD++ AN+L+ E + G + L E E R+ G
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 218 ADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276
+D+WSFG+ + EL G P+ PG + + +R P PEC E D + C
Sbjct: 362 SDVWSFGILLTELTTKGRVPY--PGMVNREVLDQVERGYRMPCP-PEC-PESLHDLMCQC 417
Query: 277 LQKGDPSKRWTASQLLSHPFLAD 299
+K +P +R T L FL D
Sbjct: 418 WRK-EPEERPTFEYL--QAFLED 437
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 103/218 (47%), Gaps = 39/218 (17%)
Query: 49 YGQEIDGLSQLEKLQVLGQGNGGTV----FKVRHKQTL--ALYALKVMQCDRGTPPNPQE 102
+ +EID +S ++ QV+G G G V K+ K+ + A+ LK ++ E
Sbjct: 26 FAKEID-ISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSE 84
Query: 103 LNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVK-SRGRLSEDIICTISRQ 161
+I+ Q + P ++ + TK S V I+ E+M+ GSL+ +++ + G+ + + + R
Sbjct: 85 ASIMGQFDHPNVIHLEGVVTK-STPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRG 143
Query: 162 VLKGLFYMHSRNIVHRDIKPANVLINEKM-----------------EHPCGYSCL----- 199
+ G+ Y+ N VHRD+ N+L+N + P S L
Sbjct: 144 IAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIP 203
Query: 200 --YESGEA-RHRKHGGYNGFAADIWSFGVTMMELYMGY 234
+ + EA ++RK A+D+WS+G+ M E+ M Y
Sbjct: 204 IRWTAPEAIQYRKFTS----ASDVWSYGIVMWEV-MSY 236
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 101/221 (45%), Gaps = 33/221 (14%)
Query: 59 LEKLQVLGQGNGGTVFKVRHK----QTLALYALKVMQ--CDRGTPPNPQELNILRQTNSP 112
L+ LQ LG+GN G+V R+ T + A+K +Q + +E+ IL+
Sbjct: 13 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 72
Query: 113 YIVKCHQI-FTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQVLKGLFYMH 170
IVK + ++ + ++MEY+ GSL Y+ K + R+ + + Q+ KG+ Y+
Sbjct: 73 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 132
Query: 171 SRNIVHRDIKPANVLINEKMEHPCG-------------YSCLYESGE------ARHRKHG 211
++ +HR++ N+L+ + G Y + E GE A
Sbjct: 133 TKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTE 192
Query: 212 GYNGFAADIWSFGVTMMELYMGYYPFLEPGQEP--DFLSLM 250
A+D+WSFGV + EL+ ++E + P +F+ ++
Sbjct: 193 SKFSVASDVWSFGVVLYELFT----YIEKSKSPPAEFMRMI 229
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 116/302 (38%), Gaps = 56/302 (18%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTV---FKVRHKQTLALYALKVMQCDRGTPPNPQELNIL 106
GQ D + L +G+G G V + +K +A+ + + +E+ IL
Sbjct: 18 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 77
Query: 107 RQTNSPYIVKCHQIFTKPSGE----VSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQV 162
I+ + I P+ E V I+ + M+ ++ +K++ LS D IC Q+
Sbjct: 78 LAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQ-HLSNDHICYFLYQI 135
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFAA---- 218
L+GL Y+HS N++HRD+KP+N+L+N + L + H G + A
Sbjct: 136 LRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWY 195
Query: 219 ----------------DIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLP 262
DIWS G + E+ + P D L+ +L I
Sbjct: 196 RAPEIMLNSKGYTKSIDIWSVGCILAEM-LSNRPIFPGKHYLDQLNHILGILGSPSQEDL 254
Query: 263 ECS-SEKFRDFIRCCLQKG-------------------------DPSKRWTASQLLSHPF 296
C + K R+++ K +P KR Q L+HP+
Sbjct: 255 NCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 314
Query: 297 LA 298
LA
Sbjct: 315 LA 316
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 113/262 (43%), Gaps = 34/262 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ----ELNILRQTNSPYIVKCHQI 120
+G+G+ TV+K +T A +Q + T Q E L+ P IV+ +
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 121 F---TKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRN--IV 175
+ K + ++ E +G+L+ Y+K ++ + RQ+LKGL ++H+R I+
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPPII 153
Query: 176 HRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHG------GYNGFAA----------- 218
HRD+K N+ I P G + + G A ++ G F A
Sbjct: 154 HRDLKCDNIFIT----GPTGSVKIGDLGLATLKRASFAKAVIGTPEFXAPEXYEEKYDES 209
Query: 219 -DIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCL 277
D+++FG +E YP+ E + + +P S + + + ++ I C+
Sbjct: 210 VDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGV--KPASFDKVAIPEVKEIIEGCI 267
Query: 278 QKGDPSKRWTASQLLSHPFLAD 299
++ + +R++ LL+H F +
Sbjct: 268 RQ-NKDERYSIKDLLNHAFFQE 288
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 105/252 (41%), Gaps = 32/252 (12%)
Query: 57 SQLEKLQVLGQGNGGTVFK-------VRHKQTLALYALKVMQCDRGTPPNPQELNILRQT 109
++ +K++VLG G GTV+K + K +A+ L+ + E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFY 168
++P++ C + + V ++ + M G L YV+ + + + Q+ KG+ Y
Sbjct: 75 DNPHV--CRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEARHRKHGG------------- 212
+ R +VHRD+ NVL+ G + L + E + GG
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 213 --YNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
+D+WS+GVT+ EL G P+ G +S +L R P P C+ + +
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPY--DGIPASEISSILEKGERLPQP-PICTIDVY 249
Query: 270 RDFIRCCLQKGD 281
++C + D
Sbjct: 250 MIMVKCWMIDAD 261
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 29/208 (13%)
Query: 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQ----CDRG-TPPNPQELNILRQTNSP 112
E ++V+G+G G V V+ K T +YA+K++ R T +E ++L +
Sbjct: 75 DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQ 134
Query: 113 YIVKCHQIFTKPSGEVSILMEYMDAGSL-EIYVKSRGRLSEDIICTISRQVLKGLFYMHS 171
+I H F + + ++M+Y G L + K +L ED+ +++ + +H
Sbjct: 135 WITALHYAF-QDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQ 193
Query: 172 RNIVHRDIKPANVL--INEKMEHPCGYSCL------------------YESGEARHRKHG 211
+ VHRDIKP NVL +N + SCL Y S E
Sbjct: 194 LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMED 253
Query: 212 GYNGFA--ADIWSFGVTMMELYMGYYPF 237
G + D WS GV M E+ G PF
Sbjct: 254 GMGKYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 83/191 (43%), Gaps = 7/191 (3%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTV---FKVRHKQTLALYALKVMQCDRGTPPNPQELNIL 106
GQ D + L +G+G G V + +K +A+ + + +E+ IL
Sbjct: 36 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 95
Query: 107 RQTNSPYIVKCHQIFTKPSGEV---SILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVL 163
+ I+ + I P+ E L+ ++ L +K++ LS D IC Q+L
Sbjct: 96 LRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQ-HLSNDHICYFLYQIL 154
Query: 164 KGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFAADIWSF 223
+GL Y+HS N++HRD+KP+N+L+N + L + H G + A W
Sbjct: 155 RGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 214
Query: 224 GVTMMELYMGY 234
+M GY
Sbjct: 215 APEIMLNSKGY 225
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 85/192 (44%), Gaps = 9/192 (4%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTV---FKVRHKQTLALYALKVMQCDRGTPPNPQELNIL 106
GQ D + L +G+G G V + +K +A+ + + +E+ IL
Sbjct: 18 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 77
Query: 107 RQTNSPYIVKCHQIFTKPSGE----VSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQV 162
I+ + I P+ E V I+ + M+ ++ +K++ LS D IC Q+
Sbjct: 78 LAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQ-HLSNDHICYFLYQI 135
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFAADIWS 222
L+GL Y+HS N++HRD+KP+N+L+N + L + H G + A W
Sbjct: 136 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 195
Query: 223 FGVTMMELYMGY 234
+M GY
Sbjct: 196 RAPEIMLNSKGY 207
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 29/208 (13%)
Query: 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQ----CDRG-TPPNPQELNILRQTNSP 112
E ++V+G+G G V V+ K T +YA+K++ R T +E ++L +
Sbjct: 91 DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQ 150
Query: 113 YIVKCHQIFTKPSGEVSILMEYMDAGSL-EIYVKSRGRLSEDIICTISRQVLKGLFYMHS 171
+I H F + + ++M+Y G L + K +L ED+ +++ + +H
Sbjct: 151 WITALHYAF-QDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQ 209
Query: 172 RNIVHRDIKPANVL--INEKMEHPCGYSCL------------------YESGEARHRKHG 211
+ VHRDIKP NVL +N + SCL Y S E
Sbjct: 210 LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMED 269
Query: 212 GYNGFA--ADIWSFGVTMMELYMGYYPF 237
G + D WS GV M E+ G PF
Sbjct: 270 GMGKYGPECDWWSLGVCMYEMLYGETPF 297
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 105/252 (41%), Gaps = 32/252 (12%)
Query: 57 SQLEKLQVLGQGNGGTVFK-------VRHKQTLALYALKVMQCDRGTPPNPQELNILRQT 109
++ +K++VLG G GTV+K + K +A+ L+ + E ++
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFY 168
++P++ C + + V ++ + M G L YV+ + + + Q+ KG+ Y
Sbjct: 109 DNPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 166
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEARHRKHGG------------- 212
+ R +VHRD+ NVL+ G + L + E + GG
Sbjct: 167 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 226
Query: 213 --YNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
+D+WS+GVT+ EL G P+ G +S +L R P P C+ + +
Sbjct: 227 HRIYTHQSDVWSYGVTVWELMTFGSKPY--DGIPASEISSILEKGERLPQP-PICTIDVY 283
Query: 270 RDFIRCCLQKGD 281
++C + D
Sbjct: 284 MIMVKCWMIDAD 295
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 9/192 (4%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTV---FKVRHKQTLALYALKVMQCDRGTPPNPQELNIL 106
GQ D + +LQ +G+G G V + K +A+ + + +E+ IL
Sbjct: 36 GQPFDVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQIL 95
Query: 107 RQTNSPYIVKCHQIFTKPSGE----VSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQV 162
+ ++ I + E V I+ + M+ ++ +KS+ +LS D IC Q+
Sbjct: 96 LRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKL-LKSQ-QLSNDHICYFLYQI 153
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFAADIWS 222
L+GL Y+HS N++HRD+KP+N+LIN + L + H G A W
Sbjct: 154 LRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWY 213
Query: 223 FGVTMMELYMGY 234
+M GY
Sbjct: 214 RAPEIMLNSKGY 225
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 126/283 (44%), Gaps = 31/283 (10%)
Query: 26 LVTQLNIPKPVSCPNLVHTEAASYGQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALY 85
L+T L+ P P V+ + +Y + + + LG G G V++ K+
Sbjct: 186 LITTLHYPAPKRNKPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTV 245
Query: 86 ALKVMQCDR-GTPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYV 144
A+K ++ D +E ++++ P +V+ + T+ I+ E+M G+L Y+
Sbjct: 246 AVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-PFYIITEFMTYGNLLDYL 304
Query: 145 K--SRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEK---MEHPCGYSCL 199
+ +R ++ ++ ++ Q+ + Y+ +N +HR++ N L+ E G S L
Sbjct: 305 RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRL 364
Query: 200 YESGEARHRKHGG--------------YNGFA--ADIWSFGVTMMELYM-GYYPFLEPGQ 242
+G+ + H G YN F+ +D+W+FGV + E+ G P+ PG
Sbjct: 365 M-TGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY--PGI 420
Query: 243 EPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKR 285
+ + +L +R PE EK + +R C Q +PS R
Sbjct: 421 DLSQVYELLEKDYR--MERPEGCPEKVYELMRACWQ-WNPSDR 460
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 126/283 (44%), Gaps = 31/283 (10%)
Query: 26 LVTQLNIPKPVSCPNLVHTEAASYGQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALY 85
L+T L+ P P V+ + +Y + + + LG G G V++ K+
Sbjct: 228 LITTLHYPAPKRNKPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTV 287
Query: 86 ALKVMQCDR-GTPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYV 144
A+K ++ D +E ++++ P +V+ + T+ I+ E+M G+L Y+
Sbjct: 288 AVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-PFYIITEFMTYGNLLDYL 346
Query: 145 K--SRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEK---MEHPCGYSCL 199
+ +R ++ ++ ++ Q+ + Y+ +N +HR++ N L+ E G S L
Sbjct: 347 RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRL 406
Query: 200 YESGEARHRKHGG--------------YNGFA--ADIWSFGVTMMELYM-GYYPFLEPGQ 242
+G+ + H G YN F+ +D+W+FGV + E+ G P+ PG
Sbjct: 407 M-TGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY--PGI 462
Query: 243 EPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKR 285
+ + +L +R PE EK + +R C Q +PS R
Sbjct: 463 DLSQVYELLEKDYR--MERPEGCPEKVYELMRACWQ-WNPSDR 502
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 118/263 (44%), Gaps = 36/263 (13%)
Query: 61 KLQV-LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-PQELNILRQTNSPYIVKCH 118
+L+V LGQG G V+ T + A+K ++ +P QE ++++ +V+ +
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY 79
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDI----ICTISRQVLKGLFYMHSRNI 174
+ ++ + I+ EYM G L ++K G + + + + ++ Q+ G+ Y+ N
Sbjct: 80 AVVSEEP--IYIVTEYMSKGCLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 175 VHRDIKPANVLINEKM---EHPCGYSCLYESGEARHRKHG--------------GYNGFA 217
VHRD++ AN+L+ E + G + L E E R+ G
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 218 ADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276
+D+WSFG+ + EL G P+ PG + + +R P PEC E D + C
Sbjct: 196 SDVWSFGILLTELTTKGRVPY--PGMVNREVLDQVERGYRM-PCPPEC-PESLHDLMCQC 251
Query: 277 LQKGDPSKRWTASQLLSHPFLAD 299
+K DP +R T L FL D
Sbjct: 252 WRK-DPEERPTFEYL--QAFLED 271
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 114/260 (43%), Gaps = 35/260 (13%)
Query: 49 YGQEIDGLSQLEKLQVLGQGNGGTVFKVRHK------QTLALYALKVMQCDRGTPPNPQE 102
+ +EID +S ++ +V+G G G V + R K +A+ LK +R E
Sbjct: 9 FAKEID-VSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSE 67
Query: 103 LNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVK-SRGRLSEDIICTISRQ 161
+I+ Q P I++ + T S V IL E+M+ G+L+ +++ + G+ + + + R
Sbjct: 68 ASIMGQFEHPNIIRLEGVVTN-SMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRG 126
Query: 162 VLKGLFYMHSRNIVHRDIKPANVLINEKM---EHPCGYSCLYESGEARHRKHGGYNG--- 215
+ G+ Y+ + VHRD+ N+L+N + G S E + + G
Sbjct: 127 IASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIP 186
Query: 216 ---------------FAADIWSFGVTMME-LYMGYYPFLEPGQEPDFLSLMLAICFREPP 259
A+D WS+G+ M E + G P+ + + D ++ + +R PP
Sbjct: 187 IRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQ-DVIN-AIEQDYRLPP 244
Query: 260 SLPECSSEKFRDFIRCCLQK 279
P+C + + C QK
Sbjct: 245 P-PDCPT-SLHQLMLDCWQK 262
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 105/252 (41%), Gaps = 32/252 (12%)
Query: 57 SQLEKLQVLGQGNGGTVFK-------VRHKQTLALYALKVMQCDRGTPPNPQELNILRQT 109
++ +K++VL G GTV+K + K +A+ L+ + E ++
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFY 168
++P++ C + + V ++M+ M G L YV+ + + + Q+ KG+ Y
Sbjct: 82 DNPHV--CRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEARHRKHGG------------- 212
+ R +VHRD+ NVL+ G + L + E + GG
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 213 --YNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
+D+WS+GVT+ EL G P+ G +S +L R P P C+ + +
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPY--DGIPASEISSILEKGERLPQP-PICTIDVY 256
Query: 270 RDFIRCCLQKGD 281
++C + D
Sbjct: 257 MIMVKCWMIDAD 268
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 85/192 (44%), Gaps = 9/192 (4%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTV---FKVRHKQTLALYALKVMQCDRGTPPNPQELNIL 106
GQ D + L +G+G G V + +K +A+ + + +E+ IL
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 79
Query: 107 RQTNSPYIVKCHQIFTKPSGE----VSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQV 162
+ I+ + I P+ E V I+ + M+ ++ +K + LS D IC Q+
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKCQ-HLSNDHICYFLYQI 137
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFAADIWS 222
L+GL Y+HS N++HRD+KP+N+L+N + L + H G + A W
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 197
Query: 223 FGVTMMELYMGY 234
+M GY
Sbjct: 198 RAPEIMLNSKGY 209
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 105/252 (41%), Gaps = 32/252 (12%)
Query: 57 SQLEKLQVLGQGNGGTVFK-------VRHKQTLALYALKVMQCDRGTPPNPQELNILRQT 109
++ +K++VLG G GTV+K + K +A+ L+ + E ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFY 168
++P++ C + + V ++ + M G L YV+ + + + Q+ KG+ Y
Sbjct: 77 DNPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEARHRKHGG------------- 212
+ R +VHRD+ NVL+ G + L + E + GG
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 213 --YNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
+D+WS+GVT+ EL G P+ G +S +L R P P C+ + +
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPY--DGIPASEISSILEKGERLPQP-PICTIDVY 251
Query: 270 RDFIRCCLQKGD 281
++C + D
Sbjct: 252 MIMVKCWMIDAD 263
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 105/252 (41%), Gaps = 32/252 (12%)
Query: 57 SQLEKLQVLGQGNGGTVFK-------VRHKQTLALYALKVMQCDRGTPPNPQELNILRQT 109
++ +K++VLG G GTV+K + K +A+ L+ + E ++
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFY 168
++P++ C + + V ++ + M G L YV+ + + + Q+ KG+ Y
Sbjct: 81 DNPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 138
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEARHRKHGG------------- 212
+ R +VHRD+ NVL+ G + L + E + GG
Sbjct: 139 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 198
Query: 213 --YNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
+D+WS+GVT+ EL G P+ G +S +L R P P C+ + +
Sbjct: 199 HRIYTHQSDVWSYGVTVWELMTFGSKPY--DGIPASEISSILEKGERLPQP-PICTIDVY 255
Query: 270 RDFIRCCLQKGD 281
++C + D
Sbjct: 256 MIMVKCWMIDAD 267
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 28/208 (13%)
Query: 49 YGQEIDGLSQLEKLQVLGQGNGGTVFKVRHK------QTLALYALKVMQCDRGTPPNPQE 102
+ +E+D S ++ +V+G G G V R K +A+ LKV ++ E
Sbjct: 36 FAKELDA-SCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCE 94
Query: 103 LNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQ 161
+I+ Q + P +V + T+ V I++E+M+ G+L+ ++ K G+ + + + R
Sbjct: 95 ASIMGQFDHPNVVHLEGVVTR-GKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRG 153
Query: 162 VLKGLFYMHSRNIVHRDIKPANVLINEKM---EHPCGYSCLYESG-EARHRKHGG----- 212
+ G+ Y+ VHRD+ N+L+N + G S + E EA + GG
Sbjct: 154 IAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVR 213
Query: 213 --------YNGF--AADIWSFGVTMMEL 230
Y F A+D+WS+G+ M E+
Sbjct: 214 WTAPEAIQYRKFTSASDVWSYGIVMWEV 241
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 105/252 (41%), Gaps = 32/252 (12%)
Query: 57 SQLEKLQVLGQGNGGTVFK-------VRHKQTLALYALKVMQCDRGTPPNPQELNILRQT 109
++ +K++VLG G GTV+K + K +A+ L+ + E ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFY 168
++P++ C + + V ++ + M G L YV+ + + + Q+ KG+ Y
Sbjct: 78 DNPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEARHRKHGG------------- 212
+ R +VHRD+ NVL+ G + L + E + GG
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 213 --YNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
+D+WS+GVT+ EL G P+ G +S +L R P P C+ + +
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPY--DGIPASEISSILEKGERLPQP-PICTIDVY 252
Query: 270 RDFIRCCLQKGD 281
++C + D
Sbjct: 253 MIMVKCWMIDAD 264
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 105/252 (41%), Gaps = 32/252 (12%)
Query: 57 SQLEKLQVLGQGNGGTVFK-------VRHKQTLALYALKVMQCDRGTPPNPQELNILRQT 109
++ +K++VLG G GTV+K + K +A+ L+ + E ++
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFY 168
++P++ C + + V ++ + M G L YV+ + + + Q+ KG+ Y
Sbjct: 82 DNPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEARHRKHGG------------- 212
+ R +VHRD+ NVL+ G + L + E + GG
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 213 --YNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
+D+WS+GVT+ EL G P+ G +S +L R P P C+ + +
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPY--DGIPASEISSILEKGERLPQP-PICTIDVY 256
Query: 270 RDFIRCCLQKGD 281
++C + D
Sbjct: 257 MIMVKCWMIDAD 268
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 112/244 (45%), Gaps = 31/244 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDR-GTPPNPQELNILRQTNSPYIVKCHQIFTK 123
LG G G V++ K+ A+K ++ D +E ++++ P +V+ + T+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 124 PSGEVSILMEYMDAGSLEIYVK--SRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKP 181
I++E+M G+L Y++ +R +S ++ ++ Q+ + Y+ +N +HRD+
Sbjct: 81 EP-PFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAA 139
Query: 182 ANVLINEK---MEHPCGYSCLYESGEARHRKHGG--------------YNGFA--ADIWS 222
N L+ E G S L +G+ + H G YN F+ +D+W+
Sbjct: 140 RNCLVGENHLVKVADFGLSRLM-TGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 197
Query: 223 FGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGD 281
FGV + E+ G P+ PG + + +L +R PE EK + +R C Q +
Sbjct: 198 FGVLLWEIATYGMSPY--PGIDLSQVYELLEKDYR--MERPEGCPEKVYELMRACWQ-WN 252
Query: 282 PSKR 285
PS R
Sbjct: 253 PSDR 256
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 105/252 (41%), Gaps = 32/252 (12%)
Query: 57 SQLEKLQVLGQGNGGTVFK-------VRHKQTLALYALKVMQCDRGTPPNPQELNILRQT 109
++ +K++VLG G GTV+K + K +A+ L+ + E ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFY 168
++P++ C + + V ++ + M G L YV+ + + + Q+ KG+ Y
Sbjct: 78 DNPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEARHRKHGG------------- 212
+ R +VHRD+ NVL+ G + L + E + GG
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 213 --YNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
+D+WS+GVT+ EL G P+ G +S +L R P P C+ + +
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPY--DGIPASEISSILEKGERLPQP-PICTIDVY 252
Query: 270 RDFIRCCLQKGD 281
++C + D
Sbjct: 253 MIMVKCWMIDAD 264
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 105/252 (41%), Gaps = 32/252 (12%)
Query: 57 SQLEKLQVLGQGNGGTVFK-------VRHKQTLALYALKVMQCDRGTPPNPQELNILRQT 109
++ +K++VLG G GTV+K + K +A+ L+ + E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFY 168
++P++ C + + V ++ + M G L YV+ + + + Q+ KG+ Y
Sbjct: 75 DNPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEARHRKHGG------------- 212
+ R +VHRD+ NVL+ G + L + E + GG
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 213 --YNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
+D+WS+GVT+ EL G P+ G +S +L R P P C+ + +
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPY--DGIPASEISSILEKGERLPQP-PICTIDVY 249
Query: 270 RDFIRCCLQKGD 281
++C + D
Sbjct: 250 MIMVKCWMIDAD 261
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 112/244 (45%), Gaps = 31/244 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDR-GTPPNPQELNILRQTNSPYIVKCHQIFTK 123
LG G G V++ K+ A+K ++ D +E ++++ P +V+ + T+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 124 PSGEVSILMEYMDAGSLEIYVK--SRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKP 181
I++E+M G+L Y++ +R +S ++ ++ Q+ + Y+ +N +HRD+
Sbjct: 81 EP-PFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAA 139
Query: 182 ANVLINEK---MEHPCGYSCLYESGEARHRKHGG--------------YNGFA--ADIWS 222
N L+ E G S L +G+ + H G YN F+ +D+W+
Sbjct: 140 RNCLVGENHLVKVADFGLSRLM-TGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 197
Query: 223 FGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGD 281
FGV + E+ G P+ PG + + +L +R PE EK + +R C Q +
Sbjct: 198 FGVLLWEIATYGMSPY--PGIDLSQVYELLEKDYR--MERPEGCPEKVYELMRACWQ-WN 252
Query: 282 PSKR 285
PS R
Sbjct: 253 PSDR 256
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 118/263 (44%), Gaps = 36/263 (13%)
Query: 61 KLQV-LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-PQELNILRQTNSPYIVKCH 118
+L+V LGQG G V+ T + A+K ++ +P QE ++++ +V+ +
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY 245
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRG----RLSEDIICTISRQVLKGLFYMHSRNI 174
+ ++ + I+ EYM GSL ++K RL + + ++ Q+ G+ Y+ N
Sbjct: 246 AVVSEEP--IYIVGEYMSKGSLLDFLKGETGKYLRLPQ--LVDMAAQIASGMAYVERMNY 301
Query: 175 VHRDIKPANVLINEKM---EHPCGYSCLYESGEARHRKHG--------------GYNGFA 217
VHRD++ AN+L+ E + G + L E E R+ G
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 218 ADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276
+D+WSFG+ + EL G P+ PG + + +R P PEC E D + C
Sbjct: 362 SDVWSFGILLTELTTKGRVPY--PGMVNREVLDQVERGYRMPCP-PEC-PESLHDLMCQC 417
Query: 277 LQKGDPSKRWTASQLLSHPFLAD 299
+K +P +R T L FL D
Sbjct: 418 WRK-EPEERPTFEYL--QAFLED 437
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 105/252 (41%), Gaps = 32/252 (12%)
Query: 57 SQLEKLQVLGQGNGGTVFK-------VRHKQTLALYALKVMQCDRGTPPNPQELNILRQT 109
++ +K++VLG G GTV+K + K +A+ L+ + E ++
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFY 168
++P++ C + + V ++ + M G L YV+ + + + Q+ KG+ Y
Sbjct: 100 DNPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 157
Query: 169 MHSRNIVHRDIKPANVLINEKME---HPCGYSCLYESGEARHRKHGG------------- 212
+ R +VHRD+ NVL+ G + L + E + GG
Sbjct: 158 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 217
Query: 213 --YNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
+D+WS+GVT+ EL G P+ G +S +L R P P C+ + +
Sbjct: 218 HRIYTHQSDVWSYGVTVWELMTFGSKPY--DGIPASEISSILEKGERLPQP-PICTIDVY 274
Query: 270 RDFIRCCLQKGD 281
++C + D
Sbjct: 275 MIMVKCWMIDAD 286
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 105/252 (41%), Gaps = 32/252 (12%)
Query: 57 SQLEKLQVLGQGNGGTVFK-------VRHKQTLALYALKVMQCDRGTPPNPQELNILRQT 109
++ +K++VLG G GTV+K + K +A+ L+ + E ++
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFY 168
++P++ C + + V ++ + M G L YV+ + + + Q+ KG+ Y
Sbjct: 69 DNPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 126
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEARHRKHGG------------- 212
+ R +VHRD+ NVL+ G + L + E + GG
Sbjct: 127 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 186
Query: 213 --YNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
+D+WS+GVT+ EL G P+ G +S +L R P P C+ + +
Sbjct: 187 HRIYTHQSDVWSYGVTVWELMTFGSKPY--DGIPASEISSILEKGERLPQP-PICTIDVY 243
Query: 270 RDFIRCCLQKGD 281
++C + D
Sbjct: 244 MIMVKCWMIDAD 255
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 120/293 (40%), Gaps = 47/293 (16%)
Query: 33 PKPVSCPNLVHTEAASYGQEIDGLSQLEKLQVLGQGNGGTVF----KVRHKQTLALYALK 88
PK V L E Y Q+ +S L G G G V+ K ++K+ + + K
Sbjct: 7 PKAVELEGLAACEG-EYSQKYSTMSPL------GSGAFGFVWTAVDKEKNKEVVVKFIKK 59
Query: 89 VMQCDRGTPPNPQ------ELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAG-SLE 141
+ +P+ E+ IL + I+K IF G ++ME +G L
Sbjct: 60 EKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN-QGFFQLVMEKHGSGLDLF 118
Query: 142 IYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPC---GYSC 198
++ RL E + I RQ++ + Y+ ++I+HRDIK N++I E G +
Sbjct: 119 AFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAA 178
Query: 199 LYESGEARHRKHGG-------------YNGFAADIWSFGVTMMELYMGYYPFLEPGQEPD 245
E G+ + G Y G ++WS GVT+ L PF E +
Sbjct: 179 YLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE--- 235
Query: 246 FLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLA 298
++ AI PP L S++ + LQ P +R T +L++ P++
Sbjct: 236 --TVEAAI---HPPYL---VSKELMSLVSGLLQPV-PERRTTLEKLVTDPWVT 279
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 27/192 (14%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALK--VMQCDRGTPPNPQEL----NILRQTNSPYIVKCH 118
LG GN GTV K ++ + + +++ + P EL N+++Q ++PYIV+
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRD 178
I S ++ME + G L Y++ + + I + QV G+ Y+ N VHRD
Sbjct: 79 GICEAESW--MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 136
Query: 179 IKPANVLINEKMEHPC---GYSCLYESGEARHR--KHG------------GYNGFAA--D 219
+ NVL+ + G S + E ++ HG Y F++ D
Sbjct: 137 LAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSKSD 196
Query: 220 IWSFGVTMMELY 231
+WSFGV M E +
Sbjct: 197 VWSFGVLMWEAF 208
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 107/258 (41%), Gaps = 43/258 (16%)
Query: 57 SQLEKLQVLGQGNGGTVFK-------VRHKQTLALYALKVMQCDRGTPPNPQELNILRQT 109
++ +K++VLG G GTV+K + K +A+ L+ + E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFY 168
++P++ C + + V ++ + M G L YV+ + + + Q+ KG+ Y
Sbjct: 75 DNPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEARHRKHGG------------- 212
+ R +VHRD+ NVL+ G + L + E + GG
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 213 --YNGFAADIWSFGVTMMELY-MGYYPF-----------LEPGQ---EPDFLSLMLAICF 255
+D+WS+GVT+ EL G P+ LE G+ +P ++ + +
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIM 252
Query: 256 REPPSLPECSSEKFRDFI 273
R+ + S KFR+ I
Sbjct: 253 RKCWMIDADSRPKFRELI 270
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 27/192 (14%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALK--VMQCDRGTPPNPQEL----NILRQTNSPYIVKCH 118
LG GN GTV K ++ + + +++ + P EL N+++Q ++PYIV+
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRD 178
I S ++ME + G L Y++ + + I + QV G+ Y+ N VHRD
Sbjct: 95 GICEAESW--MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 152
Query: 179 IKPANVLINEKMEHPC---GYSCLYESGEARHR--KHG------------GYNGFA--AD 219
+ NVL+ + G S + E ++ HG Y F+ +D
Sbjct: 153 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSD 212
Query: 220 IWSFGVTMMELY 231
+WSFGV M E +
Sbjct: 213 VWSFGVLMWEAF 224
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 27/192 (14%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALK--VMQCDRGTPPNPQEL----NILRQTNSPYIVKCH 118
LG GN GTV K ++ + + +++ + P EL N+++Q ++PYIV+
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRD 178
I S ++ME + G L Y++ + + I + QV G+ Y+ N VHRD
Sbjct: 95 GICEAESW--MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 152
Query: 179 IKPANVLINEKMEHPC---GYSCLYESGEARHR--KHG------------GYNGFA--AD 219
+ NVL+ + G S + E ++ HG Y F+ +D
Sbjct: 153 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSD 212
Query: 220 IWSFGVTMMELY 231
+WSFGV M E +
Sbjct: 213 VWSFGVLMWEAF 224
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 96/213 (45%), Gaps = 31/213 (14%)
Query: 59 LEKLQVLGQGNGGTVFKVRHK----QTLALYALKVMQ--CDRGTPPNPQELNILRQTNSP 112
L+ L+ LG+GN G+V R+ T + A+K +Q + +E+ IL+
Sbjct: 15 LKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 74
Query: 113 YIVKCHQI-FTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQVLKGLFYMH 170
IVK + ++ + ++ME++ GSL Y+ K + R+ + + Q+ KG+ Y+
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLG 134
Query: 171 SRNIVHRDIKPANVLINEKMEHPCG----YSCLYESGEARHRKHGGYN------------ 214
++ +HRD+ N+L+ + G L + E K G +
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 215 ---GFAADIWSFGVTMMELYMGYYPFLEPGQEP 244
A+D+WSFGV + EL+ ++E + P
Sbjct: 195 SKFSVASDVWSFGVVLYELFT----YIEKSKSP 223
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 105/252 (41%), Gaps = 32/252 (12%)
Query: 57 SQLEKLQVLGQGNGGTVFK-------VRHKQTLALYALKVMQCDRGTPPNPQELNILRQT 109
++ +K++VLG G GTV+K + K +A+ L+ + E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFY 168
++P++ C + + V ++ + M G L YV+ + + + Q+ KG+ Y
Sbjct: 75 DNPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEARHRKHGG------------- 212
+ R +VHRD+ NVL+ G + L + E + GG
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 213 --YNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
+D+WS+GVT+ EL G P+ G +S +L R P P C+ + +
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPY--DGIPASEISSILEKGERLPQP-PICTIDVY 249
Query: 270 RDFIRCCLQKGD 281
++C + D
Sbjct: 250 MIMVKCWMIDAD 261
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 27/192 (14%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALK--VMQCDRGTPPNPQEL----NILRQTNSPYIVKCH 118
LG GN GTV K ++ + + +++ + P EL N+++Q ++PYIV+
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRD 178
I S ++ME + G L Y++ + + I + QV G+ Y+ N VHRD
Sbjct: 85 GICEAESW--MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 142
Query: 179 IKPANVLINEKMEHPC---GYSCLYESGEARHR--KHG------------GYNGFA--AD 219
+ NVL+ + G S + E ++ HG Y F+ +D
Sbjct: 143 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSD 202
Query: 220 IWSFGVTMMELY 231
+WSFGV M E +
Sbjct: 203 VWSFGVLMWEAF 214
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 105/239 (43%), Gaps = 32/239 (13%)
Query: 35 PVSCPNLVHTEAASYGQEIDG------LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALK 88
P+S ++ TE + +DG L + +G G+ GTV + + +
Sbjct: 9 PMSDYDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKIL 68
Query: 89 VMQCDRGTPPNP--QELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVK- 145
+ Q N +E+ I+++ P IV T+P +SI+ EY+ GSL +
Sbjct: 69 MEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPN-LSIVTEYLSRGSLYRLLHK 127
Query: 146 --SRGRLSEDIICTISRQVLKGLFYMHSRN--IVHRDIKPANVLINEKMEHPC---GYSC 198
+R +L E +++ V KG+ Y+H+RN IVHRD+K N+L+++K G S
Sbjct: 128 SGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSR 187
Query: 199 LYESGEARHRKHGGYNGFAA-------------DIWSFGVTMMELYMGYYPF--LEPGQ 242
L S + G + A D++SFGV + EL P+ L P Q
Sbjct: 188 LKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ 246
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 107/258 (41%), Gaps = 43/258 (16%)
Query: 57 SQLEKLQVLGQGNGGTVFK-------VRHKQTLALYALKVMQCDRGTPPNPQELNILRQT 109
++ +K++VLG G GTV+K + K +A+ L+ + E ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFY 168
++P++ C + + V ++ + M G L YV+ + + + Q+ KG+ Y
Sbjct: 78 DNPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEARHRKHGG------------- 212
+ R +VHRD+ NVL+ G + L + E + GG
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 213 --YNGFAADIWSFGVTMMELY-MGYYPF-----------LEPGQ---EPDFLSLMLAICF 255
+D+WS+GVT+ EL G P+ LE G+ +P ++ + +
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIM 255
Query: 256 REPPSLPECSSEKFRDFI 273
R+ + S KFR+ I
Sbjct: 256 RKCWMIDADSRPKFRELI 273
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 107/258 (41%), Gaps = 43/258 (16%)
Query: 57 SQLEKLQVLGQGNGGTVFK-------VRHKQTLALYALKVMQCDRGTPPNPQELNILRQT 109
++ +K++VLG G GTV+K + K +A+ L+ + E ++
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFY 168
++P++ C + + V ++ + M G L YV+ + + + Q+ KG+ Y
Sbjct: 85 DNPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 142
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEARHRKHGG------------- 212
+ R +VHRD+ NVL+ G + L + E + GG
Sbjct: 143 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 202
Query: 213 --YNGFAADIWSFGVTMMELY-MGYYPF-----------LEPGQ---EPDFLSLMLAICF 255
+D+WS+GVT+ EL G P+ LE G+ +P ++ + +
Sbjct: 203 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIM 262
Query: 256 REPPSLPECSSEKFRDFI 273
R+ + S KFR+ I
Sbjct: 263 RKCWMIDADSRPKFRELI 280
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 27/192 (14%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALK--VMQCDRGTPPNPQEL----NILRQTNSPYIVKCH 118
LG GN GTV K ++ + + +++ + P EL N+++Q ++PYIV+
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRD 178
I S ++ME + G L Y++ + + I + QV G+ Y+ N VHRD
Sbjct: 93 GICEAESW--MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 150
Query: 179 IKPANVLINEKMEHPC---GYSCLYESGEARHR--KHG------------GYNGFA--AD 219
+ NVL+ + G S + E ++ HG Y F+ +D
Sbjct: 151 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSD 210
Query: 220 IWSFGVTMMELY 231
+WSFGV M E +
Sbjct: 211 VWSFGVLMWEAF 222
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 76/144 (52%), Gaps = 14/144 (9%)
Query: 57 SQLEKLQVLGQGNGGTVFKVRHKQT---LALYALKVMQCDRGTP-PNPQELNILRQTNS- 111
S+ E + +G G GTV+K R + +AL +++V + G P +E+ +LR+ +
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF 63
Query: 112 --PYIVK----CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRG--RLSEDIICTISRQVL 163
P +V+ C T +V+++ E++D L Y+ L + I + RQ L
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 164 KGLFYMHSRNIVHRDIKPANVLIN 187
+GL ++H+ IVHRD+KP N+L+
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVT 146
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 76/144 (52%), Gaps = 14/144 (9%)
Query: 57 SQLEKLQVLGQGNGGTVFKVRHKQT---LALYALKVMQCDRGTP-PNPQELNILRQTNS- 111
S+ E + +G G GTV+K R + +AL +++V + G P +E+ +LR+ +
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF 63
Query: 112 --PYIVK----CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRG--RLSEDIICTISRQVL 163
P +V+ C T +V+++ E++D L Y+ L + I + RQ L
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 164 KGLFYMHSRNIVHRDIKPANVLIN 187
+GL ++H+ IVHRD+KP N+L+
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVT 146
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 27/192 (14%)
Query: 65 LGQGNGGTVFKVRHK--QTLALYALKVMQCDRGTPPNPQEL----NILRQTNSPYIVKCH 118
LG GN GTV K ++ + + A+K+++ + P EL N+++Q ++PYIV+
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRD 178
I S ++ME + G L Y++ + + I + QV G+ Y+ N VHRD
Sbjct: 437 GICEAES--WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 494
Query: 179 IKPANVLINEKMEHPC---GYSCLYESGEARHR--KHG------------GYNGFA--AD 219
+ NVL+ + G S + E ++ HG Y F+ +D
Sbjct: 495 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSD 554
Query: 220 IWSFGVTMMELY 231
+WSFGV M E +
Sbjct: 555 VWSFGVLMWEAF 566
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 98/250 (39%), Gaps = 65/250 (26%)
Query: 101 QELNILRQTNSPYIVKCHQIFTKPSG-----EVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT S + ++M +M +I + SE+ I
Sbjct: 72 RELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIM---GLKFSEEKI 128
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH--RKHGGY 213
+ Q+LKGL Y+HS +VHRD+KP N+ +NE C L + G ARH + GY
Sbjct: 129 QYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNED----CELKIL-DFGLARHADAEMTGY 183
Query: 214 -----------------NGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAIC-- 254
DIWS G M E+ G F + D+L + I
Sbjct: 184 VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLF----KGKDYLDQLTQILKV 239
Query: 255 -------FREP----------PSLPECSSEKFRD-FIRCCLQKG---------DPSKRWT 287
F + SLP+ + F F R Q D KR T
Sbjct: 240 TGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLT 299
Query: 288 ASQLLSHPFL 297
A+Q L+HPF
Sbjct: 300 AAQALTHPFF 309
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 105/252 (41%), Gaps = 32/252 (12%)
Query: 57 SQLEKLQVLGQGNGGTVFK-------VRHKQTLALYALKVMQCDRGTPPNPQELNILRQT 109
++ +K++VLG G GTV+K + K +A+ L+ + E ++
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFY 168
++P++ C + + V ++ + M G L YV+ + + + Q+ KG+ Y
Sbjct: 82 DNPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEARHRKHGG------------- 212
+ R +VHRD+ NVL+ G + L + E + GG
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 213 --YNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
+D+WS+GVT+ EL G P+ G +S +L R P P C+ + +
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPY--DGIPASEISSILEKGERLPQP-PICTIDVY 256
Query: 270 RDFIRCCLQKGD 281
++C + D
Sbjct: 257 MIMVKCWMIDAD 268
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 76/144 (52%), Gaps = 14/144 (9%)
Query: 57 SQLEKLQVLGQGNGGTVFKVRHKQT---LALYALKVMQCDRGTP-PNPQELNILRQTNS- 111
S+ E + +G G GTV+K R + +AL +++V + G P +E+ +LR+ +
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF 63
Query: 112 --PYIVK----CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRG--RLSEDIICTISRQVL 163
P +V+ C T +V+++ E++D L Y+ L + I + RQ L
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 164 KGLFYMHSRNIVHRDIKPANVLIN 187
+GL ++H+ IVHRD+KP N+L+
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVT 146
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 27/192 (14%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALK--VMQCDRGTPPNPQEL----NILRQTNSPYIVKCH 118
LG GN GTV K ++ + + +++ + P EL N+++Q ++PYIV+
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRD 178
I S ++ME + G L Y++ + + I + QV G+ Y+ N VHRD
Sbjct: 75 GICEAESW--MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 132
Query: 179 IKPANVLINEKMEHPC---GYSCLYESGEARHR--KHG------------GYNGFA--AD 219
+ NVL+ + G S + E ++ HG Y F+ +D
Sbjct: 133 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSD 192
Query: 220 IWSFGVTMMELY 231
+WSFGV M E +
Sbjct: 193 VWSFGVLMWEAF 204
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 97/220 (44%), Gaps = 38/220 (17%)
Query: 42 VHTEAASYGQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALK-VMQCDRGTPPNP 100
HT +G + ++++++G G G VFK +H+ Y +K V +
Sbjct: 2 AHTVDKRFGMD------FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREV 55
Query: 101 QELNILRQTNSPYIVKCHQIF-------TKPSGE-----VSILMEYMDAGSLEIYV-KSR 147
+ L L N + C F +K S + I ME+ D G+LE ++ K R
Sbjct: 56 KALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR 115
Query: 148 G-RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG----YSCLYES 202
G +L + + + Q+ KG+ Y+HS+ +++RD+KP+N+ + + + G + L
Sbjct: 116 GEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND 175
Query: 203 GEARHRKHGGYN------------GFAADIWSFGVTMMEL 230
G+ R R G G D+++ G+ + EL
Sbjct: 176 GK-RXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 214
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 27/192 (14%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALK--VMQCDRGTPPNPQEL----NILRQTNSPYIVKCH 118
LG GN GTV K ++ + + +++ + P EL N+++Q ++PYIV+
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRD 178
I S ++ME + G L Y++ + + I + QV G+ Y+ N VHRD
Sbjct: 79 GICEAESW--MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 136
Query: 179 IKPANVLINEKMEHPC---GYSCLYESGEARHR--KHG------------GYNGFA--AD 219
+ NVL+ + G S + E ++ HG Y F+ +D
Sbjct: 137 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSD 196
Query: 220 IWSFGVTMMELY 231
+WSFGV M E +
Sbjct: 197 VWSFGVLMWEAF 208
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 111/244 (45%), Gaps = 31/244 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDR-GTPPNPQELNILRQTNSPYIVKCHQIFTK 123
LG G G V++ K+ A+K ++ D +E ++++ P +V+ + T+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 124 PSGEVSILMEYMDAGSLEIYVK--SRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKP 181
I+ E+M G+L Y++ +R +S ++ ++ Q+ + Y+ +N +HRD+
Sbjct: 81 EP-PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAA 139
Query: 182 ANVLINEK---MEHPCGYSCLYESGEARHRKHGG--------------YNGFA--ADIWS 222
N L+ E G S L +G+ + H G YN F+ +D+W+
Sbjct: 140 RNCLVGENHLVKVADFGLSRLM-TGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 197
Query: 223 FGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGD 281
FGV + E+ G P+ PG + + +L +R PE EK + +R C Q +
Sbjct: 198 FGVLLWEIATYGMSPY--PGIDLSQVYELLEKDYR--MERPEGCPEKVYELMRACWQ-WN 252
Query: 282 PSKR 285
PS R
Sbjct: 253 PSDR 256
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 111/244 (45%), Gaps = 31/244 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDR-GTPPNPQELNILRQTNSPYIVKCHQIFTK 123
LG G G V++ K+ A+K ++ D +E ++++ P +V+ + T+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 124 PSGEVSILMEYMDAGSLEIYVK--SRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKP 181
I+ E+M G+L Y++ +R +S ++ ++ Q+ + Y+ +N +HRD+
Sbjct: 81 EP-PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAA 139
Query: 182 ANVLINEK---MEHPCGYSCLYESGEARHRKHGG--------------YNGFA--ADIWS 222
N L+ E G S L +G+ + H G YN F+ +D+W+
Sbjct: 140 RNCLVGENHLVKVADFGLSRLM-TGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 197
Query: 223 FGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGD 281
FGV + E+ G P+ PG + + +L +R PE EK + +R C Q +
Sbjct: 198 FGVLLWEIATYGMSPY--PGIDLSQVYELLEKDYR--MERPEGCPEKVYELMRACWQ-WN 252
Query: 282 PSKR 285
PS R
Sbjct: 253 PSDR 256
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 27/192 (14%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALK--VMQCDRGTPPNPQEL----NILRQTNSPYIVKCH 118
LG GN GTV K ++ + + +++ + P EL N+++Q ++PYIV+
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRD 178
I S ++ME + G L Y++ + + I + QV G+ Y+ N VHRD
Sbjct: 73 GICEAESW--MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 130
Query: 179 IKPANVLINEKMEHPC---GYSCLYESGEARHR--KHG------------GYNGFA--AD 219
+ NVL+ + G S + E ++ HG Y F+ +D
Sbjct: 131 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSD 190
Query: 220 IWSFGVTMMELY 231
+WSFGV M E +
Sbjct: 191 VWSFGVLMWEAF 202
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 27/192 (14%)
Query: 65 LGQGNGGTVFKVRHK--QTLALYALKVMQCDRGTPPNPQEL----NILRQTNSPYIVKCH 118
LG GN GTV K ++ + + A+K+++ + P EL N+++Q ++PYIV+
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRD 178
I S ++ME + G L Y++ + + I + QV G+ Y+ N VHRD
Sbjct: 438 GICEAES--WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 495
Query: 179 IKPANVLINEKMEHPC---GYSCLYESGEARHR--KHG------------GYNGFA--AD 219
+ NVL+ + G S + E ++ HG Y F+ +D
Sbjct: 496 LAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSD 555
Query: 220 IWSFGVTMMELY 231
+WSFGV M E +
Sbjct: 556 VWSFGVLMWEAF 567
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 111/244 (45%), Gaps = 31/244 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDR-GTPPNPQELNILRQTNSPYIVKCHQIFTK 123
LG G G V++ K+ A+K ++ D +E ++++ P +V+ + T+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 124 PSGEVSILMEYMDAGSLEIYVK--SRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKP 181
I+ E+M G+L Y++ +R +S ++ ++ Q+ + Y+ +N +HRD+
Sbjct: 86 EP-PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAA 144
Query: 182 ANVLINEK---MEHPCGYSCLYESGEARHRKHGG--------------YNGFA--ADIWS 222
N L+ E G S L +G+ + H G YN F+ +D+W+
Sbjct: 145 RNCLVGENHLVKVADFGLSRLM-TGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 202
Query: 223 FGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGD 281
FGV + E+ G P+ PG + + +L +R PE EK + +R C Q +
Sbjct: 203 FGVLLWEIATYGMSPY--PGIDLSQVYELLEKDYR--MERPEGCPEKVYELMRACWQ-WN 257
Query: 282 PSKR 285
PS R
Sbjct: 258 PSDR 261
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 107/258 (41%), Gaps = 43/258 (16%)
Query: 57 SQLEKLQVLGQGNGGTVFK-------VRHKQTLALYALKVMQCDRGTPPNPQELNILRQT 109
++ +K++VLG G GTV+K + K +A+ L+ + E ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFY 168
++P++ C + + V ++ + M G L YV+ + + + Q+ KG+ Y
Sbjct: 77 DNPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEARHRKHGG------------- 212
+ R +VHRD+ NVL+ G + L + E + GG
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 213 --YNGFAADIWSFGVTMMELY-MGYYPF-----------LEPGQ---EPDFLSLMLAICF 255
+D+WS+GVT+ EL G P+ LE G+ +P ++ + +
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIM 254
Query: 256 REPPSLPECSSEKFRDFI 273
R+ + S KFR+ I
Sbjct: 255 RKCWMIDADSRPKFRELI 272
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 129/317 (40%), Gaps = 84/317 (26%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRG-TPPNPQELNILRQTNSP----------- 112
LG G+ TV+ + A+K+++ D+ T E+ +L++ N
Sbjct: 27 LGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGAN 86
Query: 113 YIVKCHQIFTK--PSG-EVSILMEYMDAGSLEIYVKSRGR-LSEDIICTISRQVLKGLFY 168
+I+K F P+G V ++ E + L + K R + + IS+Q+L GL Y
Sbjct: 87 HILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDY 146
Query: 169 MHSR-NIVHRDIKPANVLINEKMEHP----------CGYSCLYE---SGEARHRKH---- 210
MH R I+H DIKP NVL+ E ++ P G +C Y+ + + R++
Sbjct: 147 MHRRCGIIHTDIKPENVLM-EIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPE 205
Query: 211 ---GGYNGFAADIWSFGVTMMELYMGYYPFLEP--------------------GQEPDFL 247
G G ADIWS + EL G + F EP G+ P +L
Sbjct: 206 VLLGAPWGCGADIWSTACLIFELITGDFLF-EPDEGHSYTKDDDHIAQIIELLGELPSYL 264
Query: 248 --------------SLMLAICFREPPSLPECSSEKFR----------DFIRCCLQKGDPS 283
L+ I + L + +EK++ DF+ LQ DP
Sbjct: 265 LRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQL-DPR 323
Query: 284 KRWTASQLLSHPFLADA 300
KR A L++HP+L D
Sbjct: 324 KRADAGGLVNHPWLKDT 340
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 129/317 (40%), Gaps = 84/317 (26%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRG-TPPNPQELNILRQTNSP----------- 112
LG G+ TV+ + A+K+++ D+ T E+ +L++ N
Sbjct: 27 LGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGAN 86
Query: 113 YIVKCHQIFTK--PSG-EVSILMEYMDAGSLEIYVKSRGR-LSEDIICTISRQVLKGLFY 168
+I+K F P+G V ++ E + L + K R + + IS+Q+L GL Y
Sbjct: 87 HILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDY 146
Query: 169 MHSR-NIVHRDIKPANVLINEKMEHP----------CGYSCLYE---SGEARHRKH---- 210
MH R I+H DIKP NVL+ E ++ P G +C Y+ + + R++
Sbjct: 147 MHRRCGIIHTDIKPENVLM-EIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPE 205
Query: 211 ---GGYNGFAADIWSFGVTMMELYMGYYPFLEP--------------------GQEPDFL 247
G G ADIWS + EL G + F EP G+ P +L
Sbjct: 206 VLLGAPWGCGADIWSTACLIFELITGDFLF-EPDEGHSYTKDDDHIAQIIELLGELPSYL 264
Query: 248 --------------SLMLAICFREPPSLPECSSEKFR----------DFIRCCLQKGDPS 283
L+ I + L + +EK++ DF+ LQ DP
Sbjct: 265 LRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQL-DPR 323
Query: 284 KRWTASQLLSHPFLADA 300
KR A L++HP+L D
Sbjct: 324 KRADAGGLVNHPWLKDT 340
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 90/209 (43%), Gaps = 31/209 (14%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTV---FKVRHKQTLALYALKVMQCDRGTPPNPQELNIL 106
GQ D + L +G+G G V + +K +A+ + + +E+ IL
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 79
Query: 107 RQTNSPYIVKCHQIFTKPSGE----VSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQV 162
+ I+ + I P+ E V I+ + M+ ++ +K++ LS D IC Q+
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQ-HLSNDHICYFLYQI 137
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHG----------- 211
L+GL Y+HS N++HRD+KP+N+L+N + L + H G
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWY 197
Query: 212 ----------GYNGFAADIWSFGVTMMEL 230
GY + DIWS G + E+
Sbjct: 198 RAPEIMLNSKGYTK-SIDIWSVGCILAEM 225
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 90/209 (43%), Gaps = 31/209 (14%)
Query: 50 GQEIDGLSQLEKLQVLGQGNGGTV---FKVRHKQTLALYALKVMQCDRGTPPNPQELNIL 106
GQ D + L +G+G G V + +K +A+ + + +E+ IL
Sbjct: 21 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 80
Query: 107 RQTNSPYIVKCHQIFTKPSGE----VSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQV 162
+ I+ + I P+ E V I+ + M+ ++ +K++ LS D IC Q+
Sbjct: 81 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKL-LKTQ-HLSNDHICYFLYQI 138
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHG----------- 211
L+GL Y+HS N++HRD+KP+N+L+N + L + H G
Sbjct: 139 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWY 198
Query: 212 ----------GYNGFAADIWSFGVTMMEL 230
GY + DIWS G + E+
Sbjct: 199 RAPEIMLNSKGYTK-SIDIWSVGCILAEM 226
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 97/250 (38%), Gaps = 65/250 (26%)
Query: 101 QELNILRQTNSPYIVKCHQIFTKPSG-----EVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ ++ +FT S + ++M +M +I SE+ I
Sbjct: 90 RELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIM---GMEFSEEKI 146
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH--RKHGGY 213
+ Q+LKGL Y+HS +VHRD+KP N+ +NE C L + G ARH + GY
Sbjct: 147 QYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNED----CELKIL-DFGLARHADAEMTGY 201
Query: 214 -----------------NGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAIC-- 254
DIWS G M E+ G F + D+L + I
Sbjct: 202 VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLF----KGKDYLDQLTQILKV 257
Query: 255 -------FREP----------PSLPECSSEKFRD-FIRCCLQKG---------DPSKRWT 287
F + SLP+ + F F R Q D KR T
Sbjct: 258 TGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLT 317
Query: 288 ASQLLSHPFL 297
A+Q L+HPF
Sbjct: 318 AAQALTHPFF 327
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 93/220 (42%), Gaps = 33/220 (15%)
Query: 101 QELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISR 160
QE + P I+ + K + ++ME+ G L V S R+ DI+ +
Sbjct: 55 QEAKLFAMLKHPNIIALRGVCLKEP-NLCLVMEFARGGPLN-RVLSGKRIPPDILVNWAV 112
Query: 161 QVLKGLFYMHSRNIV---HRDIKPANVLINEKMEH---PCGYSCLYESGEAR--HRK--- 209
Q+ +G+ Y+H IV HRD+K +N+LI +K+E+ + + G AR HR
Sbjct: 113 QIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKM 172
Query: 210 --HGGYNGFA------------ADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICF 255
G Y A +D+WS+GV + EL G PF + D L++ +
Sbjct: 173 SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF----RGIDGLAVAYGVAM 228
Query: 256 RE-PPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSH 294
+ +P E F + C DP R + + +L
Sbjct: 229 NKLALPIPSTCPEPFAKLMEDCWNP-DPHSRPSFTNILDQ 267
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 105/260 (40%), Gaps = 36/260 (13%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-----PQELNILRQTNSPYIVKC 117
++LG G V R + A+KV++ D P+ +E N P IV
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 118 HQI--FTKPSGEVS-ILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNI 174
+ P+G + I+MEY+D +L V + G ++ + + L + H I
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGI 137
Query: 175 VHRDIKPANVLIN------------EKMEHPCGYSCLYES---GEARH----RKHGGYNG 215
+HRD+KPAN++I+ + G S + G A++ + G
Sbjct: 138 IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVD 197
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
+D++S G + E+ G PF G PD ++ RE P P E +
Sbjct: 198 ARSDVYSLGCVLYEVLTGEPPFT--GDSPDSVAYQ---HVREDPIPPSARHEGLSADLDA 252
Query: 276 CLQKG---DPSKRW-TASQL 291
+ K +P R+ TA+++
Sbjct: 253 VVLKALAKNPENRYQTAAEM 272
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 130/304 (42%), Gaps = 59/304 (19%)
Query: 52 EIDGL----SQLEKLQVLGQGNGGTVFKVRHKQT----LALYALKVMQCDRGTPPNP-QE 102
E DGL Q E + +G+G G VFK R + +AL ++V + G P + +E
Sbjct: 2 EKDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIRE 61
Query: 103 LNILRQTNS---PYIVK----CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR--LSED 153
+ +LR + P +V+ C T +++++ E++D L Y+ + +
Sbjct: 62 VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTE 120
Query: 154 IICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKME---HPCGYSCLYESGEA----- 205
I + Q+L+GL ++HS +VHRD+KP N+L+ + G + +Y A
Sbjct: 121 TIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV 180
Query: 206 -----RHRKHGGYNGFAA--DIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAIC---- 254
R + + +A D+WS G E++ P + D L +L +
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQLGKILDVIGLPG 239
Query: 255 ---FREPPSLPECSS--------EKF--------RDFIRCCLQKGDPSKRWTASQLLSHP 295
+ +LP + EKF +D + CL +P+KR +A LSHP
Sbjct: 240 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCL-TFNPAKRISAYSALSHP 298
Query: 296 FLAD 299
+ D
Sbjct: 299 YFQD 302
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 109/263 (41%), Gaps = 34/263 (12%)
Query: 61 KLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQE----LNILRQTNSPYIVK 116
+LQ +G+G+ G V+ + Y +K + R + +E + +L P IV+
Sbjct: 28 RLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQ 87
Query: 117 CHQIFTKPSGEVSILMEYMDAGSL--EIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNI 174
+ F + +G + I+M+Y + G L I + ED I Q+ L ++H R I
Sbjct: 88 YRESFEE-NGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKI 146
Query: 175 VHRDIKPANVLINE-------------------KMEHPCGYSCLYESGEARHRKHGGYNG 215
+HRDIK N+ + + ++ C + Y S E K YN
Sbjct: 147 LHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKP--YNN 204
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
+DIW+ G + EL + F E G + L+L I P + S R +
Sbjct: 205 -KSDIWALGCVLYELCTLKHAF-EAGSMKN---LVLKIISGSFPPVSLHYSYDLRSLV-S 258
Query: 276 CLQKGDPSKRWTASQLLSHPFLA 298
L K +P R + + +L F+A
Sbjct: 259 QLFKRNPRDRPSVNSILEKGFIA 281
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 113/260 (43%), Gaps = 35/260 (13%)
Query: 49 YGQEIDGLSQLEKLQVLGQGNGGTVFKVRHK------QTLALYALKVMQCDRGTPPNPQE 102
+ +EID +S ++ +V+G G G V + R K +A+ LK +R E
Sbjct: 7 FAKEID-VSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSE 65
Query: 103 LNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVK-SRGRLSEDIICTISRQ 161
+I+ Q P I++ + T S V IL E+M+ G+L+ +++ + G+ + + + R
Sbjct: 66 ASIMGQFEHPNIIRLEGVVTN-SMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRG 124
Query: 162 VLKGLFYMHSRNIVHRDIKPANVLINEKM---EHPCGYSCLYESGEARHRKHGGYNG--- 215
+ G+ Y+ + VHRD+ N+L+N + G S E + G
Sbjct: 125 IASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIP 184
Query: 216 ---------------FAADIWSFGVTMME-LYMGYYPFLEPGQEPDFLSLMLAICFREPP 259
A+D WS+G+ M E + G P+ + + D ++ + +R PP
Sbjct: 185 IRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQ-DVIN-AIEQDYRLPP 242
Query: 260 SLPECSSEKFRDFIRCCLQK 279
P+C + + C QK
Sbjct: 243 P-PDCPT-SLHQLMLDCWQK 260
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 130/304 (42%), Gaps = 59/304 (19%)
Query: 52 EIDGL----SQLEKLQVLGQGNGGTVFKVRHKQT----LALYALKVMQCDRGTPPNP-QE 102
E DGL Q E + +G+G G VFK R + +AL ++V + G P + +E
Sbjct: 2 EKDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIRE 61
Query: 103 LNILRQTNS---PYIVK----CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR--LSED 153
+ +LR + P +V+ C T +++++ E++D L Y+ + +
Sbjct: 62 VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTE 120
Query: 154 IICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKME---HPCGYSCLYESGEA----- 205
I + Q+L+GL ++HS +VHRD+KP N+L+ + G + +Y A
Sbjct: 121 TIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV 180
Query: 206 -----RHRKHGGYNGFA--ADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAIC---- 254
R + + +A D+WS G E++ P + D L +L +
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQLGKILDVIGLPG 239
Query: 255 ---FREPPSLPECSS--------EKF--------RDFIRCCLQKGDPSKRWTASQLLSHP 295
+ +LP + EKF +D + CL +P+KR +A LSHP
Sbjct: 240 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCL-TFNPAKRISAYSALSHP 298
Query: 296 FLAD 299
+ D
Sbjct: 299 YFQD 302
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 122/316 (38%), Gaps = 81/316 (25%)
Query: 60 EKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCD-RGTPPNPQELNILR------QTNSP 112
E L+V+G+G+ G V K + ALK+++ + R +E+ IL + N+
Sbjct: 100 EVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTM 159
Query: 113 YIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR-LSEDIICTISRQVLKGLFYMHS 171
++ + FT + + E + E+ K++ + S ++ + +L+ L +H
Sbjct: 160 NVIHMLENFTF-RNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHK 218
Query: 172 RNIVHRDIKPANVLINEKMEHPC-----GYSC-----LYESGEARHRKH-----GGYNGF 216
I+H D+KP N+L+ ++ G SC +Y ++R + G G
Sbjct: 219 NRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGM 278
Query: 217 AADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAIC---------------------- 254
D+WS G + EL G YP L E D L+ M+ +
Sbjct: 279 PIDMWSLGCILAELLTG-YPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSXKG 337
Query: 255 --------------------------FREPP-------SLPECSSEKFRDFIRCCLQKGD 281
R PP +L C F DF++ CL+ D
Sbjct: 338 YPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLE-WD 396
Query: 282 PSKRWTASQLLSHPFL 297
P+ R T Q L HP+L
Sbjct: 397 PAVRMTPGQALRHPWL 412
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 117/307 (38%), Gaps = 74/307 (24%)
Query: 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQ-CDRG--TPPNPQELNILRQTNSPY 113
S + +LG+G G V HK T + A+K ++ D+ +E+ IL+
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHEN 70
Query: 114 IVKCHQIFTKPS----GEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
I+ I S EV I+ E M V S LS+D I Q L+ + +
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTDLHR--VISTQMLSDDHIQYFIYQTLRAVKVL 128
Query: 170 HSRNIVHRDIKPANVLINEKME-HPCGYS---CLYESGEARHRKHGGYNGF--------- 216
H N++HRD+KP+N+LIN + C + + ES G +G
Sbjct: 129 HGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWY 188
Query: 217 --------------AADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAI--------- 253
A D+WS G + EL++ F PG+ D+ +L I
Sbjct: 189 RAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIF--PGR--DYRHQLLLIFGIIGTPHS 244
Query: 254 -----CFREP---------PSLPECSSEKFRDFIRC------CLQKG---DPSKRWTASQ 290
C P P P EK F R LQ+ DP+KR TA +
Sbjct: 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKM--FPRVNPKGIDLLQRMLVFDPAKRITAKE 302
Query: 291 LLSHPFL 297
L HP+L
Sbjct: 303 ALEHPYL 309
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 112/244 (45%), Gaps = 31/244 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDR-GTPPNPQELNILRQTNSPYIVKCHQIFTK 123
LG G G V++ K+ A+K ++ D +E ++++ P +V+ + T+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 124 PSGEVSILMEYMDAGSLEIYVK--SRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKP 181
I++E+M G+L Y++ +R ++ ++ ++ Q+ + Y+ +N +HRD+
Sbjct: 86 EP-PFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 144
Query: 182 ANVLINEK---MEHPCGYSCLYESGEARHRKHGG--------------YNGFA--ADIWS 222
N L+ E G S L +G+ + H G YN F+ +D+W+
Sbjct: 145 RNCLVGENHLVKVADFGLSRLM-TGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 202
Query: 223 FGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGD 281
FGV + E+ G P+ PG + + +L +R PE EK + +R C Q +
Sbjct: 203 FGVLLWEIATYGMSPY--PGIDLSQVYELLEKDYR--MERPEGCPEKVYELMRACWQ-WN 257
Query: 282 PSKR 285
PS R
Sbjct: 258 PSDR 261
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 117/307 (38%), Gaps = 74/307 (24%)
Query: 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQ-CDRG--TPPNPQELNILRQTNSPY 113
S + +LG+G G V HK T + A+K ++ D+ +E+ IL+
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHEN 70
Query: 114 IVKCHQIFTKPS----GEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
I+ I S EV I+ E M V S LS+D I Q L+ + +
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTDLHR--VISTQMLSDDHIQYFIYQTLRAVKVL 128
Query: 170 HSRNIVHRDIKPANVLINEKME-HPCGYS---CLYESGEARHRKHGGYNGF--------- 216
H N++HRD+KP+N+LIN + C + + ES G +G
Sbjct: 129 HGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWY 188
Query: 217 --------------AADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAI--------- 253
A D+WS G + EL++ F PG+ D+ +L I
Sbjct: 189 RAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIF--PGR--DYRHQLLLIFGIIGTPHS 244
Query: 254 -----CFREP---------PSLPECSSEKFRDFIRC------CLQKG---DPSKRWTASQ 290
C P P P EK F R LQ+ DP+KR TA +
Sbjct: 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKM--FPRVNPKGIDLLQRMLVFDPAKRITAKE 302
Query: 291 LLSHPFL 297
L HP+L
Sbjct: 303 ALEHPYL 309
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 122/316 (38%), Gaps = 81/316 (25%)
Query: 60 EKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCD-RGTPPNPQELNILR------QTNSP 112
E L+V+G+G+ G V K + ALK+++ + R +E+ IL + N+
Sbjct: 100 EVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTM 159
Query: 113 YIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR-LSEDIICTISRQVLKGLFYMHS 171
++ + FT + + E + E+ K++ + S ++ + +L+ L +H
Sbjct: 160 NVIHMLENFTF-RNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHK 218
Query: 172 RNIVHRDIKPANVLINEKMEHPC-----GYSC-----LYESGEARHRKH-----GGYNGF 216
I+H D+KP N+L+ ++ G SC +Y ++R + G G
Sbjct: 219 NRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGM 278
Query: 217 AADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAIC---------------------- 254
D+WS G + EL G YP L E D L+ M+ +
Sbjct: 279 PIDMWSLGCILAELLTG-YPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSXKG 337
Query: 255 --------------------------FREPP-------SLPECSSEKFRDFIRCCLQKGD 281
R PP +L C F DF++ CL+ D
Sbjct: 338 YPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLE-WD 396
Query: 282 PSKRWTASQLLSHPFL 297
P+ R T Q L HP+L
Sbjct: 397 PAVRMTPGQALRHPWL 412
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 110/243 (45%), Gaps = 29/243 (11%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDR-GTPPNPQELNILRQTNSPYIVKCHQIFTK 123
LG G G V++ K+ A+K ++ D +E ++++ P +V+ + T+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 124 PSGEVSILMEYMDAGSLEIYVK--SRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKP 181
I++E+M G+L Y++ +R ++ ++ ++ Q+ + Y+ +N +HRD+
Sbjct: 82 EP-PFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 140
Query: 182 ANVLINEK---MEHPCGYSCLYESGEARHRKHG-------------GYNGFA--ADIWSF 223
N L+ E G S L +G+ G YN F+ +D+W+F
Sbjct: 141 RNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 199
Query: 224 GVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDP 282
GV + E+ G P+ PG + + +L +R PE EK + +R C Q +P
Sbjct: 200 GVLLWEIATYGMSPY--PGIDLSQVYELLEKDYR--MERPEGCPEKVYELMRACWQ-WNP 254
Query: 283 SKR 285
S R
Sbjct: 255 SDR 257
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 117/307 (38%), Gaps = 74/307 (24%)
Query: 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQ-CDRG--TPPNPQELNILRQTNSPY 113
S + +LG+G G V HK T + A+K ++ D+ +E+ IL+
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHEN 70
Query: 114 IVKCHQIFTKPS----GEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM 169
I+ I S EV I+ E M V S LS+D I Q L+ + +
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTDLHR--VISTQMLSDDHIQYFIYQTLRAVKVL 128
Query: 170 HSRNIVHRDIKPANVLINEKME-HPCGYS---CLYESGEARHRKHGGYNGF--------- 216
H N++HRD+KP+N+LIN + C + + ES G +G
Sbjct: 129 HGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWY 188
Query: 217 --------------AADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAI--------- 253
A D+WS G + EL++ F PG+ D+ +L I
Sbjct: 189 RAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIF--PGR--DYRHQLLLIFGIIGTPHS 244
Query: 254 -----CFREP---------PSLPECSSEKFRDFIRC------CLQKG---DPSKRWTASQ 290
C P P P EK F R LQ+ DP+KR TA +
Sbjct: 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKM--FPRVNPKGIDLLQRMLVFDPAKRITAKE 302
Query: 291 LLSHPFL 297
L HP+L
Sbjct: 303 ALEHPYL 309
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 105/252 (41%), Gaps = 32/252 (12%)
Query: 57 SQLEKLQVLGQGNGGTVFK-------VRHKQTLALYALKVMQCDRGTPPNPQELNILRQT 109
++ +K++VLG G GTV+K + K +A+ L+ + E ++
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFY 168
++P++ C + + V ++ + M G L YV+ + + + Q+ +G+ Y
Sbjct: 72 DNPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNY 129
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEARHRKHGG------------- 212
+ R +VHRD+ NVL+ G + L + E + GG
Sbjct: 130 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 189
Query: 213 --YNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
+D+WS+GVT+ EL G P+ G +S +L R P P C+ + +
Sbjct: 190 HRIYTHQSDVWSYGVTVWELMTFGSKPY--DGIPASEISSILEKGERLPQP-PICTIDVY 246
Query: 270 RDFIRCCLQKGD 281
++C + D
Sbjct: 247 MIMVKCWMIDAD 258
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 105/256 (41%), Gaps = 26/256 (10%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELN----ILRQTNSPYIVKCHQI 120
+G+G V + T YA K++ + + + Q+L I R IV+ H
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 121 FTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIK 180
++ G ++ + + G L + +R SE +Q+L+ + + H +VHRD+K
Sbjct: 72 ISE-EGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLK 130
Query: 181 PANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFAA-------------------DIW 221
P N+L+ K + + + GFA DIW
Sbjct: 131 PENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIW 190
Query: 222 SFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGD 281
+ GV + L +GY PF + Q + + A + P + + + ++ I L +
Sbjct: 191 ACGVILYILLVGYPPFWDEDQHKLYQQIK-AGAYDFPSPEWDTVTPEAKNLINQMLTI-N 248
Query: 282 PSKRWTASQLLSHPFL 297
P+KR TA + L HP++
Sbjct: 249 PAKRITAHEALKHPWV 264
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 37/205 (18%)
Query: 122 TKPSGEVSILMEYMDAGSLEIYVKSRGR-------------LSEDIICTISRQVLKGLFY 168
TKP G + +++E+ G+L Y++S+ E +IC S QV KG+ +
Sbjct: 101 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIC-YSFQVAKGMEF 159
Query: 169 MHSRNIVHRDIKPANVLINEK-MEHPCGYSC---LYES------GEAR--------HRKH 210
+ SR +HRD+ N+L++EK + C + +Y+ G+AR
Sbjct: 160 LASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF 219
Query: 211 GGYNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
+D+WSFGV + E++ +G P+ + +F + P + E +
Sbjct: 220 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDY--TTPEMY 277
Query: 270 RDFIRCCLQKGDPSKRWTASQLLSH 294
+ + C G+PS+R T S+L+ H
Sbjct: 278 QTMLDC--WHGEPSQRPTFSELVEH 300
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 111/244 (45%), Gaps = 31/244 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDR-GTPPNPQELNILRQTNSPYIVKCHQIFTK 123
LG G G V++ K+ A+K ++ D +E ++++ P +V+ + T+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 124 PSGEVSILMEYMDAGSLEIYVK--SRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKP 181
I+ E+M G+L Y++ +R ++ ++ ++ Q+ + Y+ +N +HRD+
Sbjct: 86 EP-PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 144
Query: 182 ANVLINEK---MEHPCGYSCLYESGEARHRKHGG--------------YNGFA--ADIWS 222
N L+ E G S L +G+ + H G YN F+ +D+W+
Sbjct: 145 RNCLVGENHLVKVADFGLSRLM-TGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 202
Query: 223 FGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGD 281
FGV + E+ G P+ PG + + +L +R PE EK + +R C Q +
Sbjct: 203 FGVLLWEIATYGMSPY--PGIDLSQVYELLEKDYR--MERPEGCPEKVYELMRACWQ-WN 257
Query: 282 PSKR 285
PS R
Sbjct: 258 PSDR 261
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 116/262 (44%), Gaps = 31/262 (11%)
Query: 59 LEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-PQELNILRQTNSPYIVKC 117
L+ ++ LG G G V+ + A+K ++ +P + +E I+++ +V+
Sbjct: 11 LQLIKRLGNGQFGEVWMGTWNGNTKV-AIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQL 69
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGR-LSEDIICTISRQVLKGLFYMHSRNIV 175
+ + ++ + I+ EYM+ GSL ++K GR L + ++ QV G+ Y+ N +
Sbjct: 70 YAVVSEEP--IYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYI 127
Query: 176 HRDIKPANVLINEKM---EHPCGYSCLYESGEARHRKHG--------------GYNGFAA 218
HRD++ AN+L+ + G + L E E R+ G +
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 219 DIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCL 277
D+WSFG+ + EL G P+ PG + + +R P P+ + + C
Sbjct: 188 DVWSFGILLTELVTKGRVPY--PGMNNREVLEQVERGYRMP--CPQDCPISLHELMIHCW 243
Query: 278 QKGDPSKRWTASQLLSHPFLAD 299
+K DP +R T L S FL D
Sbjct: 244 KK-DPEERPTFEYLQS--FLED 262
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 111/244 (45%), Gaps = 31/244 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDR-GTPPNPQELNILRQTNSPYIVKCHQIFTK 123
LG G G V++ K+ A+K ++ D +E ++++ P +V+ + T+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 124 PSGEVSILMEYMDAGSLEIYVK--SRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKP 181
I+ E+M G+L Y++ +R ++ ++ ++ Q+ + Y+ +N +HRD+
Sbjct: 83 EP-PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 141
Query: 182 ANVLINEK---MEHPCGYSCLYESGEARHRKHGG--------------YNGFA--ADIWS 222
N L+ E G S L +G+ + H G YN F+ +D+W+
Sbjct: 142 RNCLVGENHLVKVADFGLSRLM-TGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 199
Query: 223 FGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGD 281
FGV + E+ G P+ PG + + +L +R PE EK + +R C Q +
Sbjct: 200 FGVLLWEIATYGMSPY--PGIDLSQVYELLEKDYR--MERPEGCPEKVYELMRACWQ-WN 254
Query: 282 PSKR 285
PS R
Sbjct: 255 PSDR 258
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 111/244 (45%), Gaps = 31/244 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDR-GTPPNPQELNILRQTNSPYIVKCHQIFTK 123
LG G G V++ K+ A+K ++ D +E ++++ P +V+ + T+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 124 PSGEVSILMEYMDAGSLEIYVK--SRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKP 181
I+ E+M G+L Y++ +R ++ ++ ++ Q+ + Y+ +N +HRD+
Sbjct: 83 EP-PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 141
Query: 182 ANVLINEK---MEHPCGYSCLYESGEARHRKHGG--------------YNGFA--ADIWS 222
N L+ E G S L +G+ + H G YN F+ +D+W+
Sbjct: 142 RNCLVGENHLVKVADFGLSRLM-TGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 199
Query: 223 FGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGD 281
FGV + E+ G P+ PG + + +L +R PE EK + +R C Q +
Sbjct: 200 FGVLLWEIATYGMSPY--PGIDLSQVYELLEKDYR--MERPEGCPEKVYELMRACWQ-WN 254
Query: 282 PSKR 285
PS R
Sbjct: 255 PSDR 258
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 111/244 (45%), Gaps = 31/244 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDR-GTPPNPQELNILRQTNSPYIVKCHQIFTK 123
LG G G V++ K+ A+K ++ D +E ++++ P +V+ + T+
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 93
Query: 124 PSGEVSILMEYMDAGSLEIYVK--SRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKP 181
I+ E+M G+L Y++ +R ++ ++ ++ Q+ + Y+ +N +HRD+
Sbjct: 94 EPP-FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 152
Query: 182 ANVLINEK---MEHPCGYSCLYESGEARHRKHGG--------------YNGFA--ADIWS 222
N L+ E G S L +G+ + H G YN F+ +D+W+
Sbjct: 153 RNCLVGENHLVKVADFGLSRLM-TGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 210
Query: 223 FGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGD 281
FGV + E+ G P+ PG + + +L +R PE EK + +R C Q +
Sbjct: 211 FGVLLWEIATYGMSPY--PGIDLSQVYELLEKDYR--MERPEGCPEKVYELMRACWQ-WN 265
Query: 282 PSKR 285
PS R
Sbjct: 266 PSDR 269
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 111/244 (45%), Gaps = 31/244 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDR-GTPPNPQELNILRQTNSPYIVKCHQIFTK 123
LG G G V++ K+ A+K ++ D +E ++++ P +V+ + T+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 124 PSGEVSILMEYMDAGSLEIYVK--SRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKP 181
I+ E+M G+L Y++ +R ++ ++ ++ Q+ + Y+ +N +HRD+
Sbjct: 81 EP-PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 139
Query: 182 ANVLINEK---MEHPCGYSCLYESGEARHRKHGG--------------YNGFA--ADIWS 222
N L+ E G S L +G+ + H G YN F+ +D+W+
Sbjct: 140 RNCLVGENHLVKVADFGLSRLM-TGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 197
Query: 223 FGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGD 281
FGV + E+ G P+ PG + + +L +R PE EK + +R C Q +
Sbjct: 198 FGVLLWEIATYGMSPY--PGIDLSQVYELLEKDYR--MERPEGCPEKVYELMRACWQ-WN 252
Query: 282 PSKR 285
PS R
Sbjct: 253 PSDR 256
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 31/220 (14%)
Query: 57 SQLEKLQVLGQGNGGTVFK---VRHKQTLAL-YALKVMQCDRGTP---PNPQELNILRQT 109
++L KL+VLG G GTV K + +++ + +KV++ G + +
Sbjct: 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL 72
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFY 168
+ +IV+ + P + ++ +Y+ GSL +V+ RG L ++ Q+ KG++Y
Sbjct: 73 DHAHIVRLLGLC--PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYY 130
Query: 169 MHSRNIVHRDIKPANVLINE------------KMEHPCGYSCLYESGE------ARHRKH 210
+ +VHR++ NVL+ + P LY + A H
Sbjct: 131 LEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIH 190
Query: 211 GGYNGFAADIWSFGVTMMELY-MGYYPF--LEPGQEPDFL 247
G +D+WS+GVT+ EL G P+ L + PD L
Sbjct: 191 FGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLL 230
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 121/316 (38%), Gaps = 81/316 (25%)
Query: 60 EKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCD-RGTPPNPQELNILR------QTNSP 112
E L+V+G+G G V K + ALK+++ + R +E+ IL + N+
Sbjct: 100 EVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTM 159
Query: 113 YIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR-LSEDIICTISRQVLKGLFYMHS 171
++ + FT + + E + E+ K++ + S ++ + +L+ L +H
Sbjct: 160 NVIHMLENFTF-RNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHK 218
Query: 172 RNIVHRDIKPANVLINEKMEHPC-----GYSC-----LYESGEARHRKH-----GGYNGF 216
I+H D+KP N+L+ ++ G SC +Y ++R + G G
Sbjct: 219 NRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRFYRAPEVILGARYGM 278
Query: 217 AADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAIC---------------------- 254
D+WS G + EL G YP L E D L+ M+ +
Sbjct: 279 PIDMWSLGCILAELLTG-YPLLPGEDEGDQLACMIELLGMPXQKLLDASKRAKNFVSXKG 337
Query: 255 --------------------------FREPP-------SLPECSSEKFRDFIRCCLQKGD 281
R PP +L C F DF++ CL+ D
Sbjct: 338 YPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLE-WD 396
Query: 282 PSKRWTASQLLSHPFL 297
P+ R T Q L HP+L
Sbjct: 397 PAVRMTPGQALRHPWL 412
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 31/207 (14%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPN-PQELNILRQTNSPYIVKCH 118
+Q LG+G G V ++ T A+K++ R P N +E+ I + N +VK +
Sbjct: 11 VQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 119 QIFTKPSGEVSIL-MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ G + L +EY G L ++ + E Q++ G+ Y+H I HR
Sbjct: 71 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 178 DIKPANVLINEK----------------------MEHPCGYSCLYESGEARHRKHGGYNG 215
DIKP N+L++E+ + CG + Y + E R+ ++
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG-TLPYVAPELLKRRE--FHA 185
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQ 242
D+WS G+ + + G P+ +P
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 104/252 (41%), Gaps = 32/252 (12%)
Query: 57 SQLEKLQVLGQGNGGTVFK-------VRHKQTLALYALKVMQCDRGTPPNPQELNILRQT 109
++ +K++VL G GTV+K + K +A+ L+ + E ++
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFY 168
++P++ C + + V ++ + M G L YV+ + + + Q+ KG+ Y
Sbjct: 75 DNPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEARHRKHGG------------- 212
+ R +VHRD+ NVL+ G + L + E + GG
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 213 --YNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
+D+WS+GVT+ EL G P+ G +S +L R P P C+ + +
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPY--DGIPASEISSILEKGERLPQP-PICTIDVY 249
Query: 270 RDFIRCCLQKGD 281
++C + D
Sbjct: 250 MIMVKCWMIDAD 261
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 111/244 (45%), Gaps = 31/244 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDR-GTPPNPQELNILRQTNSPYIVKCHQIFTK 123
LG G G V++ K+ A+K ++ D +E ++++ P +V+ + T+
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 84
Query: 124 PSGEVSILMEYMDAGSLEIYVK--SRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKP 181
I+ E+M G+L Y++ +R ++ ++ ++ Q+ + Y+ +N +HRD+
Sbjct: 85 EP-PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 143
Query: 182 ANVLINEK---MEHPCGYSCLYESGEARHRKHGG--------------YNGFA--ADIWS 222
N L+ E G S L +G+ + H G YN F+ +D+W+
Sbjct: 144 RNCLVGENHLVKVADFGLSRLM-TGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 201
Query: 223 FGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGD 281
FGV + E+ G P+ PG + + +L +R PE EK + +R C Q +
Sbjct: 202 FGVLLWEIATYGMSPY--PGIDLSQVYELLEKDYR--MERPEGCPEKVYELMRACWQ-WN 256
Query: 282 PSKR 285
PS R
Sbjct: 257 PSDR 260
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 105/239 (43%), Gaps = 32/239 (13%)
Query: 35 PVSCPNLVHTEAASYGQEIDG------LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALK 88
P+S ++ TE + +DG L + +G G+ GTV + + +
Sbjct: 9 PMSDYDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKIL 68
Query: 89 VMQCDRGTPPNP--QELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVK- 145
+ Q N +E+ I+++ P IV T+P +SI+ EY+ GSL +
Sbjct: 69 MEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPN-LSIVTEYLSRGSLYRLLHK 127
Query: 146 --SRGRLSEDIICTISRQVLKGLFYMHSRN--IVHRDIKPANVLINEKMEHPC---GYSC 198
+R +L E +++ V KG+ Y+H+RN IVHR++K N+L+++K G S
Sbjct: 128 SGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR 187
Query: 199 LYESGEARHRKHGGYNGFAA-------------DIWSFGVTMMELYMGYYPF--LEPGQ 242
L S + G + A D++SFGV + EL P+ L P Q
Sbjct: 188 LKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ 246
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 111/244 (45%), Gaps = 31/244 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDR-GTPPNPQELNILRQTNSPYIVKCHQIFTK 123
LG G G V++ K+ A+K ++ D +E ++++ P +V+ + T+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 124 PSGEVSILMEYMDAGSLEIYVK--SRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKP 181
I+ E+M G+L Y++ +R ++ ++ ++ Q+ + Y+ +N +HRD+
Sbjct: 86 EP-PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 144
Query: 182 ANVLINEK---MEHPCGYSCLYESGEARHRKHGG--------------YNGFA--ADIWS 222
N L+ E G S L +G+ + H G YN F+ +D+W+
Sbjct: 145 RNCLVGENHLVKVADFGLSRLM-TGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 202
Query: 223 FGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGD 281
FGV + E+ G P+ PG + + +L +R PE EK + +R C Q +
Sbjct: 203 FGVLLWEIATYGMSPY--PGIDLSQVYELLEKDYR--MERPEGCPEKVYELMRACWQ-WN 257
Query: 282 PSKR 285
PS R
Sbjct: 258 PSDR 261
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 31/220 (14%)
Query: 57 SQLEKLQVLGQGNGGTVFK---VRHKQTLAL-YALKVMQCDRGTP---PNPQELNILRQT 109
++L KL+VLG G GTV K + +++ + +KV++ G + +
Sbjct: 31 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL 90
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFY 168
+ +IV+ + P + ++ +Y+ GSL +V+ RG L ++ Q+ KG++Y
Sbjct: 91 DHAHIVRLLGLC--PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYY 148
Query: 169 MHSRNIVHRDIKPANVLINE------------KMEHPCGYSCLYESGE------ARHRKH 210
+ +VHR++ NVL+ + P LY + A H
Sbjct: 149 LEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIH 208
Query: 211 GGYNGFAADIWSFGVTMMELY-MGYYPF--LEPGQEPDFL 247
G +D+WS+GVT+ EL G P+ L + PD L
Sbjct: 209 FGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLL 248
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 104/252 (41%), Gaps = 32/252 (12%)
Query: 57 SQLEKLQVLGQGNGGTVFK-------VRHKQTLALYALKVMQCDRGTPPNPQELNILRQT 109
++ +K++VL G GTV+K + K +A+ L+ + E ++
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 110 NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFY 168
++P++ C + + V ++ + M G L YV+ + + + Q+ KG+ Y
Sbjct: 82 DNPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPC---GYSCLYESGEARHRKHGG------------- 212
+ R +VHRD+ NVL+ G + L + E + GG
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 213 --YNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269
+D+WS+GVT+ EL G P+ G +S +L R P P C+ + +
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPY--DGIPASEISSILEKGERLPQP-PICTIDVY 256
Query: 270 RDFIRCCLQKGD 281
++C + D
Sbjct: 257 MIMVKCWMIDAD 268
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 109/287 (37%), Gaps = 56/287 (19%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVM----QCDRGTPPNPQELNILRQTNSPYIVKC 117
LQ +G G G V +T A A+K + Q + +EL +L+ ++
Sbjct: 30 LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGL 89
Query: 118 HQIFTKPSG-----EVSILMEYM--DAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMH 170
+FT + ++M +M D G L + K L ED I + Q+LKGL Y+H
Sbjct: 90 LDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEK----LGEDRIQFLVYQMLKGLRYIH 145
Query: 171 SRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFAA------------ 218
+ I+HRD+KP N+ +NE E L ++ + A
Sbjct: 146 AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRWYRAPEVILNWMRYTQ 205
Query: 219 --DIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPS---------------- 260
DIWS G M E+ G F + D L ++ + P
Sbjct: 206 TVDIWSVGCIMAEMITGKTLF-KGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKG 264
Query: 261 LPECSSEKFRDFIRCC-------LQKG---DPSKRWTASQLLSHPFL 297
LPE + F + L+K D +R TA + L+HP+
Sbjct: 265 LPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF 311
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 91/206 (44%), Gaps = 37/206 (17%)
Query: 122 TKPSGEVSILMEYMDAGSLEIYVKSRGR--------------LSEDIICTISRQVLKGLF 167
TKP G + +++E+ G+L Y++S+ L+ + + S QV KG+
Sbjct: 103 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGME 162
Query: 168 YMHSRNIVHRDIKPANVLINEK-MEHPCGYSCLYE---------SGEAR--------HRK 209
++ SR +HRD+ N+L++EK + C + + G+AR
Sbjct: 163 FLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETI 222
Query: 210 HGGYNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEK 268
+D+WSFGV + E++ +G P+ + +F + P + E
Sbjct: 223 FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDY--TTPEM 280
Query: 269 FRDFIRCCLQKGDPSKRWTASQLLSH 294
++ + C G+PS+R T S+L+ H
Sbjct: 281 YQTMLDCW--HGEPSQRPTFSELVEH 304
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 111/244 (45%), Gaps = 31/244 (12%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDR-GTPPNPQELNILRQTNSPYIVKCHQIFTK 123
LG G G V++ K+ A+K ++ D +E ++++ P +V+ + T+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 124 PSGEVSILMEYMDAGSLEIYVK--SRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKP 181
I+ E+M G+L Y++ +R ++ ++ ++ Q+ + Y+ +N +HRD+
Sbjct: 81 EP-PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 139
Query: 182 ANVLINEK---MEHPCGYSCLYESGEARHRKHGG--------------YNGFA--ADIWS 222
N L+ E G S L +G+ + H G YN F+ +D+W+
Sbjct: 140 RNCLVGENHLVKVADFGLSRLM-TGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 197
Query: 223 FGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGD 281
FGV + E+ G P+ PG + + +L +R PE EK + +R C Q +
Sbjct: 198 FGVLLWEIATYGMSPY--PGIDLSQVYELLEKDYR--MERPEGCPEKVYELMRACWQ-WN 252
Query: 282 PSKR 285
PS R
Sbjct: 253 PSDR 256
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 108/243 (44%), Gaps = 31/243 (12%)
Query: 65 LGQGNGGTV----FKVRHKQT-LALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQ 119
LG GN G+V +++R KQ +A+ LK T +E I+ Q ++PYIV+
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRL-- 75
Query: 120 IFTKPSGEVSILMEYMDAGSLEIY-VKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRD 178
I + + ++ME G L + V R + + + QV G+ Y+ +N VHRD
Sbjct: 76 IGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRD 135
Query: 179 IKPANVL-------------INEKMEHPCGYSCLYESGEARHRKHG----GYNGFA--AD 219
+ NVL +++ + Y +G+ + + + F+ +D
Sbjct: 136 LAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSD 195
Query: 220 IWSFGVTMME-LYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQ 278
+WS+GVTM E L G P+ + + P+ ++ + E P PEC E + C +
Sbjct: 196 VWSYGVTMWEALSYGQKPY-KKMKGPEVMAFIEQGKRMECP--PECPPELYALMSDCWIY 252
Query: 279 KGD 281
K +
Sbjct: 253 KWE 255
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 109/243 (44%), Gaps = 29/243 (11%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDR-GTPPNPQELNILRQTNSPYIVKCHQIFTK 123
LG G G V++ K+ A+K ++ D +E ++++ P +V+ + T+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 124 PSGEVSILMEYMDAGSLEIYVK--SRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKP 181
I+ E+M G+L Y++ +R ++ ++ ++ Q+ + Y+ +N +HRD+
Sbjct: 86 EP-PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 144
Query: 182 ANVLINEK---MEHPCGYSCLYESGEARHRKHG-------------GYNGFA--ADIWSF 223
N L+ E G S L +G+ G YN F+ +D+W+F
Sbjct: 145 RNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 203
Query: 224 GVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDP 282
GV + E+ G P+ PG + + +L +R PE EK + +R C Q +P
Sbjct: 204 GVLLWEIATYGMSPY--PGIDLSQVYELLEKDYR--MERPEGCPEKVYELMRACWQ-WNP 258
Query: 283 SKR 285
S R
Sbjct: 259 SDR 261
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 120/273 (43%), Gaps = 46/273 (16%)
Query: 62 LQVLGQGNGGTVFKV--RHKQTLALYALKVMQCDRGTPPNPQE----LNILRQTNSPYIV 115
L+ +G G VF+V KQ A+ + + + D T + + LN L+Q + I
Sbjct: 61 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKII- 119
Query: 116 KCHQIFTKPSGEVSILMEYMDAGSLEI--YVKSRGRLSEDIICTISRQVLKGLFYMHSRN 173
+++ + I M M+ G++++ ++K + + + + +L+ + +H
Sbjct: 120 ---RLYDYEITDQYIYM-VMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 175
Query: 174 IVHRDIKPANVLINEKM-----------EHPCGYSCLYES--------------GEARHR 208
IVH D+KPAN LI + M P S + +S + R
Sbjct: 176 IVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 235
Query: 209 KHGGYNGFAA---DIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFR-EPPSLPEC 264
++G + D+WS G + + G PF + + L ++ E P +PE
Sbjct: 236 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE- 294
Query: 265 SSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297
+ +D ++CCL++ DP +R + +LL+HP++
Sbjct: 295 --KDLQDVLKCCLKR-DPKQRISIPELLAHPYV 324
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 40/208 (19%)
Query: 122 TKPSGEVSILMEYMDAGSLEIYVKSRGR----------------LSEDIICTISRQVLKG 165
TKP G + +++E+ G+L Y++S+ E +IC S QV KG
Sbjct: 102 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLIC-YSFQVAKG 160
Query: 166 LFYMHSRNIVHRDIKPANVLINEK-MEHPCGYSCLYE---------SGEAR--------H 207
+ ++ SR +HRD+ N+L++EK + C + + G+AR
Sbjct: 161 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPE 220
Query: 208 RKHGGYNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSS 266
+D+WSFGV + E++ +G P+ + +F + P +
Sbjct: 221 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDY--TTP 278
Query: 267 EKFRDFIRCCLQKGDPSKRWTASQLLSH 294
E ++ + C G+PS+R T S+L+ H
Sbjct: 279 EMYQTMLDC--WHGEPSQRPTFSELVEH 304
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 120/273 (43%), Gaps = 46/273 (16%)
Query: 62 LQVLGQGNGGTVFKV--RHKQTLALYALKVMQCDRGTPPNPQE----LNILRQTNSPYIV 115
L+ +G G VF+V KQ A+ + + + D T + + LN L+Q + I
Sbjct: 61 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKII- 119
Query: 116 KCHQIFTKPSGEVSILMEYMDAGSLEI--YVKSRGRLSEDIICTISRQVLKGLFYMHSRN 173
+++ + I M M+ G++++ ++K + + + + +L+ + +H
Sbjct: 120 ---RLYDYEITDQYIYM-VMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 175
Query: 174 IVHRDIKPANVLINEKM-----------EHPCGYSCLYES--------------GEARHR 208
IVH D+KPAN LI + M P S + +S + R
Sbjct: 176 IVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSR 235
Query: 209 KHGGYNGFAA---DIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFR-EPPSLPEC 264
++G + D+WS G + + G PF + + L ++ E P +PE
Sbjct: 236 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE- 294
Query: 265 SSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297
+ +D ++CCL++ DP +R + +LL+HP++
Sbjct: 295 --KDLQDVLKCCLKR-DPKQRISIPELLAHPYV 324
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 31/207 (14%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPN-PQELNILRQTNSPYIVKCH 118
+Q LG+G G V ++ T A+K++ R P N +E+ I + N +VK +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 70
Query: 119 QIFTKPSGEVSIL-MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ G + L +EY G L ++ + E Q++ G+ Y+H I HR
Sbjct: 71 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 178 DIKPANVLINEK----------------------MEHPCGYSCLYESGEARHRKHGGYNG 215
DIKP N+L++E+ + CG + Y + E R+ ++
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG-TLPYVAPELLKRRE--FHA 185
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQ 242
D+WS G+ + + G P+ +P
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 120/273 (43%), Gaps = 46/273 (16%)
Query: 62 LQVLGQGNGGTVFKV--RHKQTLALYALKVMQCDRGTPPNPQE----LNILRQTNSPYIV 115
L+ +G G VF+V KQ A+ + + + D T + + LN L+Q + I
Sbjct: 61 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKII- 119
Query: 116 KCHQIFTKPSGEVSILMEYMDAGSLEI--YVKSRGRLSEDIICTISRQVLKGLFYMHSRN 173
+++ + I M M+ G++++ ++K + + + + +L+ + +H
Sbjct: 120 ---RLYDYEITDQYIYM-VMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 175
Query: 174 IVHRDIKPANVLINEKM-----------EHPCGYSCLYES--------------GEARHR 208
IVH D+KPAN LI + M P S + +S + R
Sbjct: 176 IVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 235
Query: 209 KHGGYNGFAA---DIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFR-EPPSLPEC 264
++G + D+WS G + + G PF + + L ++ E P +PE
Sbjct: 236 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE- 294
Query: 265 SSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297
+ +D ++CCL++ DP +R + +LL+HP++
Sbjct: 295 --KDLQDVLKCCLKR-DPKQRISIPELLAHPYV 324
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 129/302 (42%), Gaps = 59/302 (19%)
Query: 52 EIDGL----SQLEKLQVLGQGNGGTVFKVRHKQT----LALYALKVMQCDRGTPPNP-QE 102
E DGL Q E + +G+G G VFK R + +AL ++V + G P + +E
Sbjct: 2 EKDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIRE 61
Query: 103 LNILRQTNS---PYIVK----CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR--LSED 153
+ +LR + P +V+ C T +++++ E++D L Y+ + +
Sbjct: 62 VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTE 120
Query: 154 IICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKME---HPCGYSCLYESGEA----- 205
I + Q+L+GL ++HS +VHRD+KP N+L+ + G + +Y A
Sbjct: 121 TIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV 180
Query: 206 -----RHRKHGGYNGFA--ADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAIC---- 254
R + + +A D+WS G E++ P + D L +L +
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQLGKILDVIGLPG 239
Query: 255 ---FREPPSLPECSS--------EKF--------RDFIRCCLQKGDPSKRWTASQLLSHP 295
+ +LP + EKF +D + CL +P+KR +A LSHP
Sbjct: 240 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCL-TFNPAKRISAYSALSHP 298
Query: 296 FL 297
+
Sbjct: 299 YF 300
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 120/273 (43%), Gaps = 46/273 (16%)
Query: 62 LQVLGQGNGGTVFKV--RHKQTLALYALKVMQCDRGTPPNPQE----LNILRQTNSPYIV 115
L+ +G G VF+V KQ A+ + + + D T + + LN L+Q + I
Sbjct: 17 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKII- 75
Query: 116 KCHQIFTKPSGEVSILMEYMDAGSLEI--YVKSRGRLSEDIICTISRQVLKGLFYMHSRN 173
+++ + I M M+ G++++ ++K + + + + +L+ + +H
Sbjct: 76 ---RLYDYEITDQYIYM-VMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 131
Query: 174 IVHRDIKPANVLINEKM-----------EHPCGYSCLYES--------------GEARHR 208
IVH D+KPAN LI + M P S + +S + R
Sbjct: 132 IVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 191
Query: 209 KHGGYNGFAA---DIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFR-EPPSLPEC 264
++G + D+WS G + + G PF + + L ++ E P +PE
Sbjct: 192 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE- 250
Query: 265 SSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297
+ +D ++CCL++ DP +R + +LL+HP++
Sbjct: 251 --KDLQDVLKCCLKR-DPKQRISIPELLAHPYV 280
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 41/209 (19%)
Query: 122 TKPSGEVSILMEYMDAGSLEIYVKSRGR-----------------LSEDIICTISRQVLK 164
TKP G + +++E+ G+L Y++S+ E +IC S QV K
Sbjct: 138 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC-YSFQVAK 196
Query: 165 GLFYMHSRNIVHRDIKPANVLINEK-MEHPCGYSCLYE---------SGEAR-------- 206
G+ ++ SR +HRD+ N+L++EK + C + + G+AR
Sbjct: 197 GMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 256
Query: 207 HRKHGGYNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
+D+WSFGV + E++ +G P+ + +F + P +
Sbjct: 257 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDY--TT 314
Query: 266 SEKFRDFIRCCLQKGDPSKRWTASQLLSH 294
E ++ + C G+PS+R T S+L+ H
Sbjct: 315 PEMYQTMLDC--WHGEPSQRPTFSELVEH 341
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 109/243 (44%), Gaps = 29/243 (11%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDR-GTPPNPQELNILRQTNSPYIVKCHQIFTK 123
LG G G V++ K+ A+K ++ D +E ++++ P +V+ + T+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 124 PSGEVSILMEYMDAGSLEIYVK--SRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKP 181
I+ E+M G+L Y++ +R ++ ++ ++ Q+ + Y+ +N +HRD+
Sbjct: 82 EP-PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 140
Query: 182 ANVLINEK---MEHPCGYSCLYESGEARHRKHG-------------GYNGFA--ADIWSF 223
N L+ E G S L +G+ G YN F+ +D+W+F
Sbjct: 141 RNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAF 199
Query: 224 GVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDP 282
GV + E+ G P+ PG + + +L +R PE EK + +R C Q +P
Sbjct: 200 GVLLWEIATYGMSPY--PGIDLSQVYELLEKDYR--MERPEGCPEKVYELMRACWQ-WNP 254
Query: 283 SKR 285
S R
Sbjct: 255 SDR 257
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 41/209 (19%)
Query: 122 TKPSGEVSILMEYMDAGSLEIYVKSRGR-----------------LSEDIICTISRQVLK 164
TKP G + +++E+ G+L Y++S+ E +IC S QV K
Sbjct: 101 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC-YSFQVAK 159
Query: 165 GLFYMHSRNIVHRDIKPANVLINEK-MEHPCGYSCLYE---------SGEAR-------- 206
G+ ++ SR +HRD+ N+L++EK + C + + G+AR
Sbjct: 160 GMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAP 219
Query: 207 HRKHGGYNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
+D+WSFGV + E++ +G P+ + +F + P +
Sbjct: 220 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDY--TT 277
Query: 266 SEKFRDFIRCCLQKGDPSKRWTASQLLSH 294
E ++ + C G+PS+R T S+L+ H
Sbjct: 278 PEMYQTMLDC--WHGEPSQRPTFSELVEH 304
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 41/209 (19%)
Query: 122 TKPSGEVSILMEYMDAGSLEIYVKSRGR-----------------LSEDIICTISRQVLK 164
TKP G + +++E+ G+L Y++S+ E +IC S QV K
Sbjct: 101 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC-YSFQVAK 159
Query: 165 GLFYMHSRNIVHRDIKPANVLINEK-MEHPCGYSCLYE---------SGEAR-------- 206
G+ ++ SR +HRD+ N+L++EK + C + + G+AR
Sbjct: 160 GMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAP 219
Query: 207 HRKHGGYNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
+D+WSFGV + E++ +G P+ + +F + P +
Sbjct: 220 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDY--TT 277
Query: 266 SEKFRDFIRCCLQKGDPSKRWTASQLLSH 294
E ++ + C G+PS+R T S+L+ H
Sbjct: 278 PEMYQTMLDC--WHGEPSQRPTFSELVEH 304
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 41/209 (19%)
Query: 122 TKPSGEVSILMEYMDAGSLEIYVKSRGR-----------------LSEDIICTISRQVLK 164
TKP G + +++E+ G+L Y++S+ E +IC S QV K
Sbjct: 101 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC-YSFQVAK 159
Query: 165 GLFYMHSRNIVHRDIKPANVLINEK-MEHPCGYSCLYE---------SGEAR-------- 206
G+ ++ SR +HRD+ N+L++EK + C + + G+AR
Sbjct: 160 GMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 219
Query: 207 HRKHGGYNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
+D+WSFGV + E++ +G P+ + +F + P +
Sbjct: 220 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDY--TT 277
Query: 266 SEKFRDFIRCCLQKGDPSKRWTASQLLSH 294
E ++ + C G+PS+R T S+L+ H
Sbjct: 278 PEMYQTMLDC--WHGEPSQRPTFSELVEH 304
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 120/273 (43%), Gaps = 46/273 (16%)
Query: 62 LQVLGQGNGGTVFKV--RHKQTLALYALKVMQCDRGTPPNPQE----LNILRQTNSPYIV 115
L+ +G G VF+V KQ A+ + + + D T + + LN L+Q + I
Sbjct: 14 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKII- 72
Query: 116 KCHQIFTKPSGEVSILMEYMDAGSLEI--YVKSRGRLSEDIICTISRQVLKGLFYMHSRN 173
+++ + I M M+ G++++ ++K + + + + +L+ + +H
Sbjct: 73 ---RLYDYEITDQYIYM-VMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 128
Query: 174 IVHRDIKPANVLINEKM-----------EHPCGYSCLYES--------------GEARHR 208
IVH D+KPAN LI + M P S + +S + R
Sbjct: 129 IVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 188
Query: 209 KHGGYNGFAA---DIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFR-EPPSLPEC 264
++G + D+WS G + + G PF + + L ++ E P +PE
Sbjct: 189 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE- 247
Query: 265 SSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297
+ +D ++CCL++ DP +R + +LL+HP++
Sbjct: 248 --KDLQDVLKCCLKR-DPKQRISIPELLAHPYV 277
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 109/243 (44%), Gaps = 29/243 (11%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDR-GTPPNPQELNILRQTNSPYIVKCHQIFTK 123
LG G G V++ K+ A+K ++ D +E ++++ P +V+ + T+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 124 PSGEVSILMEYMDAGSLEIYVK--SRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKP 181
I+ E+M G+L Y++ +R ++ ++ ++ Q+ + Y+ +N +HRD+
Sbjct: 83 EP-PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 141
Query: 182 ANVLINEK---MEHPCGYSCLYESGEARHRKHG-------------GYNGFA--ADIWSF 223
N L+ E G S L +G+ G YN F+ +D+W+F
Sbjct: 142 RNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAF 200
Query: 224 GVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDP 282
GV + E+ G P+ PG + + +L +R PE EK + +R C Q +P
Sbjct: 201 GVLLWEIATYGMSPY--PGIDLSQVYELLEKDYR--MERPEGCPEKVYELMRACWQ-WNP 255
Query: 283 SKR 285
S R
Sbjct: 256 SDR 258
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 41/209 (19%)
Query: 122 TKPSGEVSILMEYMDAGSLEIYVKSRGR-----------------LSEDIICTISRQVLK 164
TKP G + +++E+ G+L Y++S+ E +IC S QV K
Sbjct: 92 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC-YSFQVAK 150
Query: 165 GLFYMHSRNIVHRDIKPANVLINEK-MEHPCGYSCLYE---------SGEAR-------- 206
G+ ++ SR +HRD+ N+L++EK + C + + G+AR
Sbjct: 151 GMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAP 210
Query: 207 HRKHGGYNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
+D+WSFGV + E++ +G P+ + +F + P +
Sbjct: 211 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDY--TT 268
Query: 266 SEKFRDFIRCCLQKGDPSKRWTASQLLSH 294
E ++ + C G+PS+R T S+L+ H
Sbjct: 269 PEMYQTMLDC--WHGEPSQRPTFSELVEH 295
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 120/273 (43%), Gaps = 46/273 (16%)
Query: 62 LQVLGQGNGGTVFKV--RHKQTLALYALKVMQCDRGTPPNPQE----LNILRQTNSPYIV 115
L+ +G G VF+V KQ A+ + + + D T + + LN L+Q + I
Sbjct: 13 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKII- 71
Query: 116 KCHQIFTKPSGEVSILMEYMDAGSLEI--YVKSRGRLSEDIICTISRQVLKGLFYMHSRN 173
+++ + I M M+ G++++ ++K + + + + +L+ + +H
Sbjct: 72 ---RLYDYEITDQYIYM-VMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 127
Query: 174 IVHRDIKPANVLINEKM-----------EHPCGYSCLYES--------------GEARHR 208
IVH D+KPAN LI + M P S + +S + R
Sbjct: 128 IVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 187
Query: 209 KHGGYNGFAA---DIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFR-EPPSLPEC 264
++G + D+WS G + + G PF + + L ++ E P +PE
Sbjct: 188 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE- 246
Query: 265 SSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297
+ +D ++CCL++ DP +R + +LL+HP++
Sbjct: 247 --KDLQDVLKCCLKR-DPKQRISIPELLAHPYV 276
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 41/209 (19%)
Query: 122 TKPSGEVSILMEYMDAGSLEIYVKSRGR-----------------LSEDIICTISRQVLK 164
TKP G + +++E+ G+L Y++S+ E +IC S QV K
Sbjct: 103 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLIC-YSFQVAK 161
Query: 165 GLFYMHSRNIVHRDIKPANVLINEK-MEHPCGYSCLYE---------SGEAR-------- 206
G+ ++ SR +HRD+ N+L++EK + C + + G+AR
Sbjct: 162 GMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 221
Query: 207 HRKHGGYNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
+D+WSFGV + E++ +G P+ + +F + P +
Sbjct: 222 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDY--TT 279
Query: 266 SEKFRDFIRCCLQKGDPSKRWTASQLLSH 294
E ++ + C G+PS+R T S+L+ H
Sbjct: 280 PEMYQTMLDC--WHGEPSQRPTFSELVEH 306
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 120/273 (43%), Gaps = 46/273 (16%)
Query: 62 LQVLGQGNGGTVFKV--RHKQTLALYALKVMQCDRGTPPNPQE----LNILRQTNSPYIV 115
L+ +G G VF+V KQ A+ + + + D T + + LN L+Q + I
Sbjct: 33 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKII- 91
Query: 116 KCHQIFTKPSGEVSILMEYMDAGSLEI--YVKSRGRLSEDIICTISRQVLKGLFYMHSRN 173
+++ + I M M+ G++++ ++K + + + + +L+ + +H
Sbjct: 92 ---RLYDYEITDQYIYM-VMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 147
Query: 174 IVHRDIKPANVLINEKM-----------EHPCGYSCLYES--------------GEARHR 208
IVH D+KPAN LI + M P S + +S + R
Sbjct: 148 IVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 207
Query: 209 KHGGYNGFAA---DIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFR-EPPSLPEC 264
++G + D+WS G + + G PF + + L ++ E P +PE
Sbjct: 208 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE- 266
Query: 265 SSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297
+ +D ++CCL++ DP +R + +LL+HP++
Sbjct: 267 --KDLQDVLKCCLKR-DPKQRISIPELLAHPYV 296
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 31/205 (15%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPN-PQELNILRQTNSPYIVKCH 118
+Q LG+G G V ++ T A+K++ R P N +E+ I + N +VK +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 119 QIFTKPSGEVSIL-MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ G + L +EY G L ++ + E Q++ G+ Y+H I HR
Sbjct: 71 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 178 DIKPANVLINEK----------------------MEHPCGYSCLYESGEARHRKHGGYNG 215
DIKP N+L++E+ + CG + Y + E R+ ++
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG-TLPYVAPELLKRRE--FHA 185
Query: 216 FAADIWSFGVTMMELYMGYYPFLEP 240
D+WS G+ + + G P+ +P
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQP 210
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 69/135 (51%), Gaps = 4/135 (2%)
Query: 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALK-VMQCDRGTPPN-PQELNILRQTNSPYI 114
S L +VLG+G G KV H++T + +K +++ D T +E+ ++R P +
Sbjct: 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNV 69
Query: 115 VKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRN 173
+K + K ++ + EY+ G+L +KS + + ++ + G+ Y+HS N
Sbjct: 70 LKFIGVLYK-DKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN 128
Query: 174 IVHRDIKPANVLINE 188
I+HRD+ N L+ E
Sbjct: 129 IIHRDLNSHNCLVRE 143
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 31/205 (15%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPN-PQELNILRQTNSPYIVKCH 118
+Q LG+G G V ++ T A+K++ R P N +E+ I + N +VK +
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 119 QIFTKPSGEVSIL-MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ G + L +EY G L ++ + E Q++ G+ Y+H I HR
Sbjct: 72 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 129
Query: 178 DIKPANVLINEK----------------------MEHPCGYSCLYESGEARHRKHGGYNG 215
DIKP N+L++E+ + CG + Y + E R+ ++
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG-TLPYVAPELLKRRE--FHA 186
Query: 216 FAADIWSFGVTMMELYMGYYPFLEP 240
D+WS G+ + + G P+ +P
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQP 211
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 31/205 (15%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPN-PQELNILRQTNSPYIVKCH 118
+Q LG+G G V ++ T A+K++ R P N +E+ I + N +VK +
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 119 QIFTKPSGEVSIL-MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ G + L +EY G L ++ + E Q++ G+ Y+H I HR
Sbjct: 72 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 129
Query: 178 DIKPANVLINEK----------------------MEHPCGYSCLYESGEARHRKHGGYNG 215
DIKP N+L++E+ + CG + Y + E R+ ++
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG-TLPYVAPELLKRRE--FHA 186
Query: 216 FAADIWSFGVTMMELYMGYYPFLEP 240
D+WS G+ + + G P+ +P
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQP 211
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 31/205 (15%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPN-PQELNILRQTNSPYIVKCH 118
+Q LG+G G V ++ T A+K++ R P N +E+ I + N +VK +
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 119 QIFTKPSGEVSIL-MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ G + L +EY G L ++ + E Q++ G+ Y+H I HR
Sbjct: 72 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 129
Query: 178 DIKPANVLINEK----------------------MEHPCGYSCLYESGEARHRKHGGYNG 215
DIKP N+L++E+ + CG + Y + E R+ ++
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG-TLPYVAPELLKRRE--FHA 186
Query: 216 FAADIWSFGVTMMELYMGYYPFLEP 240
D+WS G+ + + G P+ +P
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQP 211
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 31/205 (15%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPN-PQELNILRQTNSPYIVKCH 118
+Q LG+G G V ++ T A+K++ R P N +E+ I + N +VK +
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 119 QIFTKPSGEVSIL-MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ G + L +EY G L ++ + E Q++ G+ Y+H I HR
Sbjct: 72 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 129
Query: 178 DIKPANVLINEK----------------------MEHPCGYSCLYESGEARHRKHGGYNG 215
DIKP N+L++E+ + CG + Y + E R+ ++
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG-TLPYVAPELLKRRE--FHA 186
Query: 216 FAADIWSFGVTMMELYMGYYPFLEP 240
D+WS G+ + + G P+ +P
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQP 211
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 90/209 (43%), Gaps = 41/209 (19%)
Query: 122 TKPSGEVSILMEYMDAGSLEIYVKSRGR-----------------LSEDIICTISRQVLK 164
TKP G + ++ E+ G+L Y++S+ E +IC S QV K
Sbjct: 92 TKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC-YSFQVAK 150
Query: 165 GLFYMHSRNIVHRDIKPANVLINEK-MEHPCGYSCLYE---------SGEAR-------- 206
G+ ++ SR +HRD+ N+L++EK + C + + G+AR
Sbjct: 151 GMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAP 210
Query: 207 HRKHGGYNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
+D+WSFGV + E++ +G P+ + +F + P +
Sbjct: 211 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDY--TT 268
Query: 266 SEKFRDFIRCCLQKGDPSKRWTASQLLSH 294
E ++ + C G+PS+R T S+L+ H
Sbjct: 269 PEMYQTMLDC--WHGEPSQRPTFSELVEH 295
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 31/207 (14%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPN-PQELNILRQTNSPYIVKCH 118
+Q LG+G G V ++ T A+K++ R P N +E+ I + N +VK +
Sbjct: 10 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 69
Query: 119 QIFTKPSGEVSIL-MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ G + L +EY G L ++ + E Q++ G+ Y+H I HR
Sbjct: 70 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 127
Query: 178 DIKPANVLINEK----------------------MEHPCGYSCLYESGEARHRKHGGYNG 215
DIKP N+L++E+ + CG + Y + E R+ ++
Sbjct: 128 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG-TLPYVAPELLKRRE--FHA 184
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQ 242
D+WS G+ + + G P+ +P
Sbjct: 185 EPVDVWSCGIVLTAMLAGELPWDQPSD 211
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 31/207 (14%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPN-PQELNILRQTNSPYIVKCH 118
+Q LG+G G V ++ T A+K++ R P N +E+ I + N +VK +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 119 QIFTKPSGEVSIL-MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ G + L +EY G L ++ + E Q++ G+ Y+H I HR
Sbjct: 71 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 178 DIKPANVLINEK----------------------MEHPCGYSCLYESGEARHRKHGGYNG 215
DIKP N+L++E+ + CG + Y + E R+ ++
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG-TLPYVAPELLKRRE--FHA 185
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQ 242
D+WS G+ + + G P+ +P
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 131/297 (44%), Gaps = 37/297 (12%)
Query: 12 QPASIASSVRKPRHLVTQLNI-PKPVSCPNLVHTEAASYGQEIDGLSQLEKLQVLGQGNG 70
+PA I +S KPR + ++ P S P + + ++ ++ +E LG GN
Sbjct: 295 EPARI-TSPDKPRPMPMDTSVFESPFSDPEELKDKKLFLKRDNLLIADIE----LGCGNF 349
Query: 71 GTV----FKVRHKQT-LALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQIFTKPS 125
G+V +++R KQ +A+ LK T +E I+ Q ++PYIV+ I +
Sbjct: 350 GSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRL--IGVCQA 407
Query: 126 GEVSILMEYMDAGSLEIY-VKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANV 184
+ ++ME G L + V R + + + QV G+ Y+ +N VHR++ NV
Sbjct: 408 EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNV 467
Query: 185 L-------------INEKMEHPCGYSCLYESGEARHRKHG----GYNGFA--ADIWSFGV 225
L +++ + Y +G+ + + + F+ +D+WS+GV
Sbjct: 468 LLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGV 527
Query: 226 TMME-LYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGD 281
TM E L G P+ + + P+ ++ + E P PEC E + C + K +
Sbjct: 528 TMWEALSYGQKPY-KKMKGPEVMAFIEQGKRMECP--PECPPELYALMSDCWIYKWE 581
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 31/207 (14%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPN-PQELNILRQTNSPYIVKCH 118
+Q LG+G G V ++ T A+K++ R P N +E+ I + N +VK +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 119 QIFTKPSGEVSIL-MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ G + L +EY G L ++ + E Q++ G+ Y+H I HR
Sbjct: 71 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 178 DIKPANVLINEK----------------------MEHPCGYSCLYESGEARHRKHGGYNG 215
DIKP N+L++E+ + CG + Y + E R+ ++
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG-TLPYVAPELLKRRE--FHA 185
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQ 242
D+WS G+ + + G P+ +P
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 99/225 (44%), Gaps = 41/225 (18%)
Query: 42 VHTEAASYGQEIDGLSQLE--KLQVLGQGNGGTVFKVRHKQTLALYALK-VMQCDRGTPP 98
V T A+ GQ D ++ +V+G G+ G V++ + + L A+K V+Q G
Sbjct: 3 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ---GKAF 59
Query: 99 NPQELNILRQTNSPYIVKCHQIFTKPSGE------VSILMEYMDAGSLEI---YVKSRGR 149
+EL I+R+ + IV+ F SGE ++++++Y+ A + Y +++
Sbjct: 60 KNRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQT 118
Query: 150 LSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK 209
L + Q+ + L Y+HS I HRDIKP N+L++ L + G A+
Sbjct: 119 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD----TAVLKLCDFGSAKQLV 174
Query: 210 HGGYNG--------------FAA-------DIWSFGVTMMELYMG 233
G N F A D+WS G + EL +G
Sbjct: 175 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 31/207 (14%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPN-PQELNILRQTNSPYIVKCH 118
+Q LG+G G V ++ T A+K++ R P N +E+ I + N +VK +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 119 QIFTKPSGEVSIL-MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ G + L +EY G L ++ + E Q++ G+ Y+H I HR
Sbjct: 71 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 178 DIKPANVLINEK----------------------MEHPCGYSCLYESGEARHRKHGGYNG 215
DIKP N+L++E+ + CG + Y + E R+ ++
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG-TLPYVAPELLKRRE--FHA 185
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQ 242
D+WS G+ + + G P+ +P
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 90/209 (43%), Gaps = 41/209 (19%)
Query: 122 TKPSGEVSILMEYMDAGSLEIYVKSRGR-----------------LSEDIICTISRQVLK 164
TKP G + ++ E+ G+L Y++S+ E +IC S QV K
Sbjct: 92 TKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC-YSFQVAK 150
Query: 165 GLFYMHSRNIVHRDIKPANVLINEK-MEHPCGYSCLYE---------SGEAR-------- 206
G+ ++ SR +HRD+ N+L++EK + C + + G+AR
Sbjct: 151 GMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 210
Query: 207 HRKHGGYNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
+D+WSFGV + E++ +G P+ + +F + P +
Sbjct: 211 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDY--TT 268
Query: 266 SEKFRDFIRCCLQKGDPSKRWTASQLLSH 294
E ++ + C G+PS+R T S+L+ H
Sbjct: 269 PEMYQTMLDC--WHGEPSQRPTFSELVEH 295
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 31/207 (14%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPN-PQELNILRQTNSPYIVKCH 118
+Q LG+G G V ++ T A+K++ R P N +E+ I + N +VK +
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 119 QIFTKPSGEVSIL-MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ G + L +EY G L ++ + E Q++ G+ Y+H I HR
Sbjct: 72 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 129
Query: 178 DIKPANVLINEK----------------------MEHPCGYSCLYESGEARHRKHGGYNG 215
DIKP N+L++E+ + CG + Y + E R+ ++
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG-TLPYVAPELLKRRE--FHA 186
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQ 242
D+WS G+ + + G P+ +P
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 31/207 (14%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPN-PQELNILRQTNSPYIVKCH 118
+Q LG+G G V ++ T A+K++ R P N +E+ I + N +VK +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 119 QIFTKPSGEVSIL-MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ G + L +EY G L ++ + E Q++ G+ Y+H I HR
Sbjct: 71 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 178 DIKPANVLINEK----------------------MEHPCGYSCLYESGEARHRKHGGYNG 215
DIKP N+L++E+ + CG + Y + E R+ ++
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG-TLPYVAPELLKRRE--FHA 185
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQ 242
D+WS G+ + + G P+ +P
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 31/207 (14%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPN-PQELNILRQTNSPYIVKCH 118
+Q LG+G G V ++ T A+K++ R P N +E+ I + N +VK +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 119 QIFTKPSGEVSIL-MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ G + L +EY G L ++ + E Q++ G+ Y+H I HR
Sbjct: 71 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 178 DIKPANVLINEK----------------------MEHPCGYSCLYESGEARHRKHGGYNG 215
DIKP N+L++E+ + CG + Y + E R+ ++
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG-TLPYVAPELLKRRE--FHA 185
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQ 242
D+WS G+ + + G P+ +P
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 90/209 (43%), Gaps = 41/209 (19%)
Query: 122 TKPSGEVSILMEYMDAGSLEIYVKSRGR-----------------LSEDIICTISRQVLK 164
TKP G + ++ E+ G+L Y++S+ E +IC S QV K
Sbjct: 92 TKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC-YSFQVAK 150
Query: 165 GLFYMHSRNIVHRDIKPANVLINEK-MEHPCGYSCLYE---------SGEAR-------- 206
G+ ++ SR +HRD+ N+L++EK + C + + G+AR
Sbjct: 151 GMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 210
Query: 207 HRKHGGYNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265
+D+WSFGV + E++ +G P+ + +F + P +
Sbjct: 211 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDY--TT 268
Query: 266 SEKFRDFIRCCLQKGDPSKRWTASQLLSH 294
E ++ + C G+PS+R T S+L+ H
Sbjct: 269 PEMYQTMLDC--WHGEPSQRPTFSELVEH 295
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 31/207 (14%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPN-PQELNILRQTNSPYIVKCH 118
+Q LG+G G V ++ T A+K++ R P N +E+ I + N +VK +
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 119 QIFTKPSGEVSIL-MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ G + L +EY G L ++ + E Q++ G+ Y+H I HR
Sbjct: 72 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 129
Query: 178 DIKPANVLINEK----------------------MEHPCGYSCLYESGEARHRKHGGYNG 215
DIKP N+L++E+ + CG + Y + E R+ ++
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG-TLPYVAPELLKRRE--FHA 186
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQ 242
D+WS G+ + + G P+ +P
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 97/202 (48%), Gaps = 34/202 (16%)
Query: 59 LEKLQVLGQGNGGTV----FKVRHKQTLALYALKVMQCDRGTPPN-----PQELNILRQT 109
L+K++ LG+G+ G V + + T + A+K ++ G P +E+ ILR
Sbjct: 11 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALK--EGCGPQLRSGWQREIEILRTL 68
Query: 110 NSPYIVKCHQIFTKPSGE--VSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLF 167
+IVK ++ + GE V ++MEY+ GSL Y+ R + + ++Q+ +G+
Sbjct: 69 YHEHIVK-YKGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCVGLAQLLLFAQQICEGMA 126
Query: 168 YMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHGGYNGF------ 216
Y+H+++ +HR + NVL++ G L ++ H R+ G F
Sbjct: 127 YLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 186
Query: 217 --------AADIWSFGVTMMEL 230
A+D+WSFGVT+ EL
Sbjct: 187 LKECKFYYASDVWSFGVTLYEL 208
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 97/202 (48%), Gaps = 34/202 (16%)
Query: 59 LEKLQVLGQGNGGTV----FKVRHKQTLALYALKVMQCDRGTPPN-----PQELNILRQT 109
L+K++ LG+G+ G V + + T + A+K ++ G P +E+ ILR
Sbjct: 10 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALK--EGCGPQLRSGWQREIEILRTL 67
Query: 110 NSPYIVKCHQIFTKPSGE--VSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLF 167
+IVK ++ + GE V ++MEY+ GSL Y+ R + + ++Q+ +G+
Sbjct: 68 YHEHIVK-YKGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCVGLAQLLLFAQQICEGMA 125
Query: 168 YMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH-----RKHGGYNGF------ 216
Y+H+++ +HR + NVL++ G L ++ H R+ G F
Sbjct: 126 YLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 185
Query: 217 --------AADIWSFGVTMMEL 230
A+D+WSFGVT+ EL
Sbjct: 186 LKECKFYYASDVWSFGVTLYEL 207
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 71/160 (44%), Gaps = 29/160 (18%)
Query: 101 QELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTI-- 158
QE +RQ + P+IVK + T+ V I+ME G L +++ R + S D+ I
Sbjct: 60 QEALTMRQFDHPHIVKLIGVITE--NPVWIIMELCTLGELRSFLQVR-KFSLDLASLILY 116
Query: 159 SRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPC------GYSCLYESGEARHRKHG- 211
+ Q+ L Y+ S+ VHRDI NVL++ + C G S E G
Sbjct: 117 AYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYMEDSTXXKASKGK 173
Query: 212 -----------GYNGF--AADIWSFGVTMMELYM-GYYPF 237
+ F A+D+W FGV M E+ M G PF
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 101/216 (46%), Gaps = 39/216 (18%)
Query: 51 QEIDGLSQLEKLQVLGQGNGGTV----FKVRHKQTL--ALYALKVMQCDRGTPPNPQELN 104
+EID +S ++ QV+G G G V K+ K+ + A+ LK ++ E +
Sbjct: 2 KEID-ISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEAS 60
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVK-SRGRLSEDIICTISRQVL 163
I+ Q + P ++ + TK S V I+ E+M+ GSL+ +++ + G+ + + + R +
Sbjct: 61 IMGQFDHPNVIHLEGVVTK-STPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIA 119
Query: 164 KGLFYMHSRNIVHRDIKPANVLINEKM-----------------EHPCGYSCL------- 199
G+ Y+ N VHR + N+L+N + P S L
Sbjct: 120 AGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIR 179
Query: 200 YESGEA-RHRKHGGYNGFAADIWSFGVTMMELYMGY 234
+ + EA ++RK A+D+WS+G+ M E+ M Y
Sbjct: 180 WTAPEAIQYRKFTS----ASDVWSYGIVMWEV-MSY 210
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 45/217 (20%)
Query: 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALK-VMQCDRGTPPNPQELNILRQTNSPYIVK 116
++++++G G G VFK +H+ Y ++ V + + L L N +
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNG 72
Query: 117 CHQIF------TKPSGEVS-------------------ILMEYMDAGSLEIYV-KSRG-R 149
C F + S E S I ME+ D G+LE ++ K RG +
Sbjct: 73 CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK 132
Query: 150 LSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG----YSCLYESGEA 205
L + + + Q+ KG+ Y+HS+ ++HRD+KP+N+ + + + G + L G+
Sbjct: 133 LDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK- 191
Query: 206 RHRKHGGYN------------GFAADIWSFGVTMMEL 230
R R G G D+++ G+ + EL
Sbjct: 192 RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 228
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 41/207 (19%)
Query: 122 TKPSGEVSILMEYMDAGSLEIYVKSRGR------------LSEDIICTISRQVLKGLFYM 169
TKP G + +++E+ G+L Y++S+ L+ + + S QV KG+ ++
Sbjct: 101 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFL 160
Query: 170 HSRNIVHRDIKPANVLINEKMEHPCGYSCL----------YESGEAR--------HRKHG 211
SR +HRD+ N+L++EK L G+AR
Sbjct: 161 ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD 220
Query: 212 GYNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPD---FLSLMLAICFREPPSLPECSSE 267
+D+WSFGV + E++ +G P+ PG + D L R P + E
Sbjct: 221 RVYTIQSDVWSFGVLLWEIFSLGASPY--PGVKIDEEFXRRLKEGTRMRAPDY---TTPE 275
Query: 268 KFRDFIRCCLQKGDPSKRWTASQLLSH 294
++ + C G+PS+R T S+L+ H
Sbjct: 276 MYQTMLDCW--HGEPSQRPTFSELVEH 300
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 104/260 (40%), Gaps = 36/260 (13%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-----PQELNILRQTNSPYIVKC 117
++LG G V R + A+KV++ D P+ +E N P IV
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 118 HQI--FTKPSGEVS-ILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNI 174
+ P+G + I+MEY+D +L V + G ++ + + L + H I
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGI 137
Query: 175 VHRDIKPANVLIN------------EKMEHPCGYSCLYES---GEARH----RKHGGYNG 215
+HRD+KPAN+LI+ + G S + G A++ + G
Sbjct: 138 IHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVD 197
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
+D++S G + E+ G PF G P ++ RE P P E +
Sbjct: 198 ARSDVYSLGCVLYEVLTGEPPFT--GDSPVSVAYQ---HVREDPIPPSARHEGLSADLDA 252
Query: 276 CLQKG---DPSKRW-TASQL 291
+ K +P R+ TA+++
Sbjct: 253 VVLKALAKNPENRYQTAAEM 272
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 85/202 (42%), Gaps = 25/202 (12%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPN-PQELNILRQTNSPYIVKCH 118
+Q LG+G G V ++ T A+K++ R P N +E+ I + N +VK +
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 71
Query: 119 QIFTKPSGEVSIL-MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ G + L +EY G L ++ + E Q++ G+ Y+H I HR
Sbjct: 72 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 129
Query: 178 DIKPANVLINEK-----MEHPCGYSCLYESGEARHRKHGGYNGFAA-------------- 218
DIKP N+L++E+ + Y + E K G + A
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPV 189
Query: 219 DIWSFGVTMMELYMGYYPFLEP 240
D+WS G+ + + G P+ +P
Sbjct: 190 DVWSCGIVLTAMLAGELPWDQP 211
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 85/204 (41%), Gaps = 25/204 (12%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPN-PQELNILRQTNSPYIVKCH 118
+Q LG+G G V ++ T A+K++ R P N +E+ I + N +VK +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 70
Query: 119 QIFTKPSGEVSIL-MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ G + L +EY G L ++ + E Q++ G+ Y+H I HR
Sbjct: 71 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 178 DIKPANVLINEK-----MEHPCGYSCLYESGEARHRKHGGYNGFAA-------------- 218
DIKP N+L++E+ + Y + E K G + A
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPV 188
Query: 219 DIWSFGVTMMELYMGYYPFLEPGQ 242
D+WS G+ + + G P+ +P
Sbjct: 189 DVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 71/138 (51%), Gaps = 17/138 (12%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALK--------VMQCDRGTPPNPQELNILRQTNSPYI 114
++G+G+ G V+ K T A+K ++ C R +E+ IL + S YI
Sbjct: 32 HLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRIL----REITILNRLKSDYI 87
Query: 115 VKCHQIFTKPS----GEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMH 170
++ + + E+ I++E D+ +++ K+ L+E+ I TI +L G ++H
Sbjct: 88 IRLYDLIIPDDLLKFDELYIVLEIADSDLKKLF-KTPIFLTEEHIKTILYNLLLGENFIH 146
Query: 171 SRNIVHRDIKPANVLINE 188
I+HRD+KPAN L+N+
Sbjct: 147 ESGIIHRDLKPANCLLNQ 164
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 118/273 (43%), Gaps = 46/273 (16%)
Query: 62 LQVLGQGNGGTVFKV--RHKQTLALYALKVMQCDRGTPPNPQE----LNILRQTNSPYIV 115
L+ +G G VF+V KQ A+ + + + D T + + LN L+Q + I
Sbjct: 33 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKII- 91
Query: 116 KCHQIFTKPSGEVSILMEYMDAGSLEI--YVKSRGRLSEDIICTISRQVLKGLFYMHSRN 173
+++ + I M M+ G++++ ++K + + + + +L+ + +H
Sbjct: 92 ---RLYDYEITDQYIYM-VMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 147
Query: 174 IVHRDIKPANVLINEKMEHPCGY--------------------SCLYESGEA-RHRKHGG 212
IVH D+KPAN LI + M + + Y EA +
Sbjct: 148 IVHSDLKPANFLIVDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSR 207
Query: 213 YNGFAA-------DIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFR-EPPSLPEC 264
NG + D+WS G + + G PF + + L ++ E P +PE
Sbjct: 208 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE- 266
Query: 265 SSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297
+ +D ++CCL++ DP +R + +LL+HP++
Sbjct: 267 --KDLQDVLKCCLKR-DPKQRISIPELLAHPYV 296
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 104/260 (40%), Gaps = 36/260 (13%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-----PQELNILRQTNSPYIVKC 117
++LG G V R + A+KV++ D P+ +E N P IV
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 118 HQI--FTKPSGEVS-ILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNI 174
+ P+G + I+MEY+D +L V + G ++ + + L + H I
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGI 137
Query: 175 VHRDIKPANVLIN------------EKMEHPCGYSCLYES---GEARH----RKHGGYNG 215
+HRD+KPAN++I+ + G S + G A++ + G
Sbjct: 138 IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVD 197
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
+D++S G + E+ G PF G P ++ RE P P E +
Sbjct: 198 ARSDVYSLGCVLYEVLTGEPPFT--GDSPVSVAYQ---HVREDPIPPSARHEGLSADLDA 252
Query: 276 CLQKG---DPSKRW-TASQL 291
+ K +P R+ TA+++
Sbjct: 253 VVLKALAKNPENRYQTAAEM 272
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 87/207 (42%), Gaps = 31/207 (14%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPN-PQELNILRQTNSPYIVKCH 118
+Q LG+G G V ++ T A+K++ R P N +E+ I N +VK +
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFY 71
Query: 119 QIFTKPSGEVSIL-MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ G + L +EY G L ++ + E Q++ G+ Y+H I HR
Sbjct: 72 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 129
Query: 178 DIKPANVLINEK----------------------MEHPCGYSCLYESGEARHRKHGGYNG 215
DIKP N+L++E+ + CG + Y + E R+ ++
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG-TLPYVAPELLKRRE--FHA 186
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQ 242
D+WS G+ + + G P+ +P
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 101 QELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTI-- 158
QE +RQ + P+IVK + T+ V I+ME G L +++ R + S D+ I
Sbjct: 440 QEALTMRQFDHPHIVKLIGVITE--NPVWIIMELCTLGELRSFLQVR-KFSLDLASLILY 496
Query: 159 SRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCL--YESGEARHRKHGG---- 212
+ Q+ L Y+ S+ VHRDI NVL++ G L Y ++ G
Sbjct: 497 AYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 556
Query: 213 ---------YNGF--AADIWSFGVTMMELYM-GYYPF 237
+ F A+D+W FGV M E+ M G PF
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 593
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 101 QELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTI-- 158
QE +RQ + P+IVK + T+ V I+ME G L +++ R + S D+ I
Sbjct: 60 QEALTMRQFDHPHIVKLIGVITE--NPVWIIMELCTLGELRSFLQVR-KFSLDLASLILY 116
Query: 159 SRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCL--YESGEARHRKHGG---- 212
+ Q+ L Y+ S+ VHRDI NVL++ G L Y ++ G
Sbjct: 117 AYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPI 176
Query: 213 ---------YNGF--AADIWSFGVTMMELYM-GYYPF 237
+ F A+D+W FGV M E+ M G PF
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 85/204 (41%), Gaps = 25/204 (12%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPN-PQELNILRQTNSPYIVKCH 118
+Q LG+G G V ++ T A+K++ R P N +E+ I + N +VK +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 119 QIFTKPSGEVSIL-MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ G + L +EY G L ++ + E Q++ G+ Y+H I HR
Sbjct: 71 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 178 DIKPANVLINEK-----MEHPCGYSCLYESGEARHRKHGGYNGFAA-------------- 218
DIKP N+L++E+ + Y + E K G + A
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPV 188
Query: 219 DIWSFGVTMMELYMGYYPFLEPGQ 242
D+WS G+ + + G P+ +P
Sbjct: 189 DVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 104/260 (40%), Gaps = 36/260 (13%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-----PQELNILRQTNSPYIVKC 117
++LG G V R + A+KV++ D P+ +E N P IV
Sbjct: 18 EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 118 HQI--FTKPSGEVS-ILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNI 174
+ P+G + I+MEY+D +L V + G ++ + + L + H I
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGI 137
Query: 175 VHRDIKPANVLIN------------EKMEHPCGYSCLYES---GEARH----RKHGGYNG 215
+HRD+KPAN++I+ + G S + G A++ + G
Sbjct: 138 IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVD 197
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
+D++S G + E+ G PF G P ++ RE P P E +
Sbjct: 198 ARSDVYSLGCVLYEVLTGEPPFT--GDSPVSVAYQ---HVREDPIPPSARHEGLSADLDA 252
Query: 276 CLQKG---DPSKRW-TASQL 291
+ K +P R+ TA+++
Sbjct: 253 VVLKALAKNPENRYQTAAEM 272
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 85/204 (41%), Gaps = 25/204 (12%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPN-PQELNILRQTNSPYIVKCH 118
+Q LG+G G V ++ T A+K++ R P N +E+ I + N +VK +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 119 QIFTKPSGEVSIL-MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ G + L +EY G L ++ + E Q++ G+ Y+H I HR
Sbjct: 71 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 178 DIKPANVLINEK-----MEHPCGYSCLYESGEARHRKHGGYNGFAA-------------- 218
DIKP N+L++E+ + Y + E K G + A
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPV 188
Query: 219 DIWSFGVTMMELYMGYYPFLEPGQ 242
D+WS G+ + + G P+ +P
Sbjct: 189 DVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 85/204 (41%), Gaps = 25/204 (12%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPN-PQELNILRQTNSPYIVKCH 118
+Q LG+G G V ++ T A+K++ R P N +E+ I + N +VK +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 119 QIFTKPSGEVSIL-MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ G + L +EY G L ++ + E Q++ G+ Y+H I HR
Sbjct: 71 G--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 178 DIKPANVLINEK-----MEHPCGYSCLYESGEARHRKHGGYNGFAA-------------- 218
DIKP N+L++E+ + Y + E K G + A
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPV 188
Query: 219 DIWSFGVTMMELYMGYYPFLEPGQ 242
D+WS G+ + + G P+ +P
Sbjct: 189 DVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 73/141 (51%), Gaps = 12/141 (8%)
Query: 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVK 116
++ +L+ +G G G+VFK + +YA+K + + + E N LR+ + ++
Sbjct: 11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK--RSKKPLAGSVDEQNALREVYAHAVLG 68
Query: 117 CH----QIFTKPSGEVSILM--EYMDAGSLEIYVKSRGRL----SEDIICTISRQVLKGL 166
H + F+ + + +L+ EY + GSL + R+ E + + QV +GL
Sbjct: 69 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 128
Query: 167 FYMHSRNIVHRDIKPANVLIN 187
Y+HS ++VH DIKP+N+ I+
Sbjct: 129 RYIHSMSLVHMDIKPSNIFIS 149
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 73/141 (51%), Gaps = 12/141 (8%)
Query: 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVK 116
++ +L+ +G G G+VFK + +YA+K + + + E N LR+ + ++
Sbjct: 9 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK--RSKKPLAGSVDEQNALREVYAHAVLG 66
Query: 117 CH----QIFTKPSGEVSILM--EYMDAGSLEIYVKSRGRL----SEDIICTISRQVLKGL 166
H + F+ + + +L+ EY + GSL + R+ E + + QV +GL
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 167 FYMHSRNIVHRDIKPANVLIN 187
Y+HS ++VH DIKP+N+ I+
Sbjct: 127 RYIHSMSLVHMDIKPSNIFIS 147
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 101 QELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTI-- 158
QE +RQ + P+IVK + T+ V I+ME G L +++ R + S D+ I
Sbjct: 440 QEALTMRQFDHPHIVKLIGVITE--NPVWIIMELCTLGELRSFLQVR-KFSLDLASLILY 496
Query: 159 SRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCL--YESGEARHRKHGG---- 212
+ Q+ L Y+ S+ VHRDI NVL++ G L Y ++ G
Sbjct: 497 AYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPI 556
Query: 213 ---------YNGF--AADIWSFGVTMMELYM-GYYPF 237
+ F A+D+W FGV M E+ M G PF
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 593
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 73/141 (51%), Gaps = 12/141 (8%)
Query: 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVK 116
++ +L+ +G G G+VFK + +YA+K + + + E N LR+ + ++
Sbjct: 9 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK--RSKKPLAGSVDEQNALREVYAHAVLG 66
Query: 117 CH----QIFTKPSGEVSILM--EYMDAGSLEIYVKSRGRL----SEDIICTISRQVLKGL 166
H + F+ + + +L+ EY + GSL + R+ E + + QV +GL
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 167 FYMHSRNIVHRDIKPANVLIN 187
Y+HS ++VH DIKP+N+ I+
Sbjct: 127 RYIHSMSLVHMDIKPSNIFIS 147
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 41/225 (18%)
Query: 42 VHTEAASYGQEIDGLSQLE--KLQVLGQGNGGTVFKVRHKQTLALYALK-VMQCDRGTPP 98
V T A+ GQ D ++ +V+G G+ G V++ + + L A+K V+Q R
Sbjct: 4 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF--- 60
Query: 99 NPQELNILRQTNSPYIVKCHQIFTKPSGE------VSILMEYMDAGSLEI---YVKSRGR 149
+EL I+R+ + IV+ F SGE ++++++Y+ + Y +++
Sbjct: 61 KNRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT 119
Query: 150 LSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK 209
L + Q+ + L Y+HS I HRDIKP N+L++ L + G A+
Sbjct: 120 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD----TAVLKLCDFGSAKQLV 175
Query: 210 HGGYNG--------------FAA-------DIWSFGVTMMELYMG 233
G N F A D+WS G + EL +G
Sbjct: 176 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 41/225 (18%)
Query: 42 VHTEAASYGQEIDGLSQLE--KLQVLGQGNGGTVFKVRHKQTLALYALK-VMQCDRGTPP 98
V T A+ GQ D ++ +V+G G+ G V++ + + L A+K V+Q R
Sbjct: 3 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF--- 59
Query: 99 NPQELNILRQTNSPYIVKCHQIFTKPSGE------VSILMEYMDAGSLEI---YVKSRGR 149
+EL I+R+ + IV+ F SGE ++++++Y+ + Y +++
Sbjct: 60 KNRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT 118
Query: 150 LSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK 209
L + Q+ + L Y+HS I HRDIKP N+L++ L + G A+
Sbjct: 119 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT----AVLKLCDFGSAKQLV 174
Query: 210 HGGYNG--------------FAA-------DIWSFGVTMMELYMG 233
G N F A D+WS G + EL +G
Sbjct: 175 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 41/225 (18%)
Query: 42 VHTEAASYGQEIDGLSQLE--KLQVLGQGNGGTVFKVRHKQTLALYALK-VMQCDRGTPP 98
V T A+ GQ D ++ +V+G G+ G V++ + + L A+K V+Q R
Sbjct: 3 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF--- 59
Query: 99 NPQELNILRQTNSPYIVKCHQIFTKPSGE------VSILMEYMDAGSLEI---YVKSRGR 149
+EL I+R+ + IV+ F SGE ++++++Y+ + Y +++
Sbjct: 60 KNRELQIMRKLDHCNIVRLRYFFYS-SGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQT 118
Query: 150 LSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK 209
L + Q+ + L Y+HS I HRDIKP N+L++ L + G A+
Sbjct: 119 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT----AVLKLCDFGSAKQLV 174
Query: 210 HGGYNG--------------FAA-------DIWSFGVTMMELYMG 233
G N F A D+WS G + EL +G
Sbjct: 175 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 41/225 (18%)
Query: 42 VHTEAASYGQEIDGLSQLE--KLQVLGQGNGGTVFKVRHKQTLALYALK-VMQCDRGTPP 98
V T A+ GQ D ++ +V+G G+ G V++ + + L A+K V+Q R
Sbjct: 3 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF--- 59
Query: 99 NPQELNILRQTNSPYIVKCHQIFTKPSGE------VSILMEYMDAGSLEI---YVKSRGR 149
+EL I+R+ + IV+ F SGE ++++++Y+ + Y +++
Sbjct: 60 KNRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT 118
Query: 150 LSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK 209
L + Q+ + L Y+HS I HRDIKP N+L++ L + G A+
Sbjct: 119 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD----TAVLKLCDFGSAKQLV 174
Query: 210 HGGYNG--------------FAA-------DIWSFGVTMMELYMG 233
G N F A D+WS G + EL +G
Sbjct: 175 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 101 QELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTI-- 158
QE +RQ + P+IVK + T+ V I+ME G L +++ R + S D+ I
Sbjct: 62 QEALTMRQFDHPHIVKLIGVITE--NPVWIIMELCTLGELRSFLQVR-KYSLDLASLILY 118
Query: 159 SRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCL--YESGEARHRKHGG---- 212
+ Q+ L Y+ S+ VHRDI NVL++ G L Y ++ G
Sbjct: 119 AYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 178
Query: 213 ---------YNGF--AADIWSFGVTMMELYM-GYYPF 237
+ F A+D+W FGV M E+ M G PF
Sbjct: 179 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 215
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 104/260 (40%), Gaps = 36/260 (13%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-----PQELNILRQTNSPYIVKC 117
++LG G V R + A+KV++ D P+ +E N P IV
Sbjct: 18 EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 118 HQI--FTKPSGEVS-ILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNI 174
+ P+G + I+MEY+D +L V + G ++ + + L + H I
Sbjct: 78 YATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGI 137
Query: 175 VHRDIKPANVLIN------------EKMEHPCGYSCLYES---GEARH----RKHGGYNG 215
+HRD+KPAN++I+ + G S + G A++ + G
Sbjct: 138 IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVD 197
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
+D++S G + E+ G PF G P ++ RE P P E +
Sbjct: 198 ARSDVYSLGCVLYEVLTGEPPFT--GDSPVSVAYQ---HVREDPIPPSARHEGLSADLDA 252
Query: 276 CLQKG---DPSKRW-TASQL 291
+ K +P R+ TA+++
Sbjct: 253 VVLKALAKNPENRYQTAAEM 272
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 101 QELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTI-- 158
QE +RQ + P+IVK + T+ V I+ME G L +++ R + S D+ I
Sbjct: 65 QEALTMRQFDHPHIVKLIGVITE--NPVWIIMELCTLGELRSFLQVR-KYSLDLASLILY 121
Query: 159 SRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCL--YESGEARHRKHGG---- 212
+ Q+ L Y+ S+ VHRDI NVL++ G L Y ++ G
Sbjct: 122 AYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 181
Query: 213 ---------YNGF--AADIWSFGVTMMELYM-GYYPF 237
+ F A+D+W FGV M E+ M G PF
Sbjct: 182 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 218
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 101 QELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTI-- 158
QE +RQ + P+IVK + T+ V I+ME G L +++ R + S D+ I
Sbjct: 88 QEALTMRQFDHPHIVKLIGVITE--NPVWIIMELCTLGELRSFLQVR-KYSLDLASLILY 144
Query: 159 SRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCL--YESGEARHRKHGG---- 212
+ Q+ L Y+ S+ VHRDI NVL++ G L Y ++ G
Sbjct: 145 AYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 204
Query: 213 ---------YNGF--AADIWSFGVTMMELYM-GYYPF 237
+ F A+D+W FGV M E+ M G PF
Sbjct: 205 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 241
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 73/141 (51%), Gaps = 12/141 (8%)
Query: 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVK 116
++ +L+ +G G G+VFK + +YA+K + + + E N LR+ + ++
Sbjct: 7 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK--RSKKPLAGSVDEQNALREVYAHAVLG 64
Query: 117 CH----QIFTKPSGEVSILM--EYMDAGSLEIYVKSRGRL----SEDIICTISRQVLKGL 166
H + F+ + + +L+ EY + GSL + R+ E + + QV +GL
Sbjct: 65 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 124
Query: 167 FYMHSRNIVHRDIKPANVLIN 187
Y+HS ++VH DIKP+N+ I+
Sbjct: 125 RYIHSMSLVHMDIKPSNIFIS 145
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 41/225 (18%)
Query: 42 VHTEAASYGQEIDGLSQLE--KLQVLGQGNGGTVFKVRHKQTLALYALK-VMQCDRGTPP 98
V T A+ GQ D ++ +V+G G+ G V++ + + L A+K V+Q R
Sbjct: 3 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF--- 59
Query: 99 NPQELNILRQTNSPYIVKCHQIFTKPSGE------VSILMEYMDAGSLEI---YVKSRGR 149
+EL I+R+ + IV+ F SGE ++++++Y+ + Y +++
Sbjct: 60 KNRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT 118
Query: 150 LSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK 209
L + Q+ + L Y+HS I HRDIKP N+L++ L + G A+
Sbjct: 119 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT----AVLKLCDFGSAKQLV 174
Query: 210 HGGYNG--------------FAA-------DIWSFGVTMMELYMG 233
G N F A D+WS G + EL +G
Sbjct: 175 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 101 QELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTI-- 158
QE +RQ + P+IVK + T+ V I+ME G L +++ R + S D+ I
Sbjct: 57 QEALTMRQFDHPHIVKLIGVITE--NPVWIIMELCTLGELRSFLQVR-KYSLDLASLILY 113
Query: 159 SRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCL--YESGEARHRKHGG---- 212
+ Q+ L Y+ S+ VHRDI NVL++ G L Y ++ G
Sbjct: 114 AYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 173
Query: 213 ---------YNGF--AADIWSFGVTMMELYM-GYYPF 237
+ F A+D+W FGV M E+ M G PF
Sbjct: 174 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 210
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 101 QELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTI-- 158
QE +RQ + P+IVK + T+ V I+ME G L +++ R + S D+ I
Sbjct: 63 QEALTMRQFDHPHIVKLIGVITE--NPVWIIMELCTLGELRSFLQVR-KYSLDLASLILY 119
Query: 159 SRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCL--YESGEARHRKHGG---- 212
+ Q+ L Y+ S+ VHRDI NVL++ G L Y ++ G
Sbjct: 120 AYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 179
Query: 213 ---------YNGF--AADIWSFGVTMMELYM-GYYPF 237
+ F A+D+W FGV M E+ M G PF
Sbjct: 180 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 216
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 101 QELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTI-- 158
QE +RQ + P+IVK + T+ V I+ME G L +++ R + S D+ I
Sbjct: 60 QEALTMRQFDHPHIVKLIGVITE--NPVWIIMELCTLGELRSFLQVR-KYSLDLASLILY 116
Query: 159 SRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCL--YESGEARHRKHGG---- 212
+ Q+ L Y+ S+ VHRDI NVL++ G L Y ++ G
Sbjct: 117 AYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 176
Query: 213 ---------YNGF--AADIWSFGVTMMELYM-GYYPF 237
+ F A+D+W FGV M E+ M G PF
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 41/225 (18%)
Query: 42 VHTEAASYGQEIDGLSQLE--KLQVLGQGNGGTVFKVRHKQTLALYALK-VMQCDRGTPP 98
V T A+ GQ D ++ +V+G G+ G V++ + + L A+K V+Q R
Sbjct: 16 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF--- 72
Query: 99 NPQELNILRQTNSPYIVKCHQIFTKPSGE------VSILMEYMDAGSLEI---YVKSRGR 149
+EL I+R+ + IV+ F SGE ++++++Y+ + Y +++
Sbjct: 73 KNRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT 131
Query: 150 LSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK 209
L + Q+ + L Y+HS I HRDIKP N+L++ L + G A+
Sbjct: 132 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD----TAVLKLCDFGSAKQLV 187
Query: 210 HGGYNG--------------FAA-------DIWSFGVTMMELYMG 233
G N F A D+WS G + EL +G
Sbjct: 188 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 232
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 41/225 (18%)
Query: 42 VHTEAASYGQEIDGLSQLE--KLQVLGQGNGGTVFKVRHKQTLALYALK-VMQCDRGTPP 98
V T A+ GQ D ++ +V+G G+ G V++ + + L A+K V+Q R
Sbjct: 22 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF--- 78
Query: 99 NPQELNILRQTNSPYIVKCHQIFTKPSGE------VSILMEYMDAGSLEI---YVKSRGR 149
+EL I+R+ + IV+ F SGE ++++++Y+ + Y +++
Sbjct: 79 KNRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT 137
Query: 150 LSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK 209
L + Q+ + L Y+HS I HRDIKP N+L++ L + G A+
Sbjct: 138 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD----TAVLKLCDFGSAKQLV 193
Query: 210 HGGYNG--------------FAA-------DIWSFGVTMMELYMG 233
G N F A D+WS G + EL +G
Sbjct: 194 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 238
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 41/225 (18%)
Query: 42 VHTEAASYGQEIDGLSQLE--KLQVLGQGNGGTVFKVRHKQTLALYALK-VMQCDRGTPP 98
V T A+ GQ D ++ +V+G G+ G V++ + + L A+K V+Q R
Sbjct: 11 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF--- 67
Query: 99 NPQELNILRQTNSPYIVKCHQIFTKPSGE------VSILMEYMDAGSLEI---YVKSRGR 149
+EL I+R+ + IV+ F SGE ++++++Y+ + Y +++
Sbjct: 68 KNRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT 126
Query: 150 LSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK 209
L + Q+ + L Y+HS I HRDIKP N+L++ L + G A+
Sbjct: 127 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD----TAVLKLCDFGSAKQLV 182
Query: 210 HGGYNG--------------FAA-------DIWSFGVTMMELYMG 233
G N F A D+WS G + EL +G
Sbjct: 183 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 227
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 101 QELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTI-- 158
QE +RQ + P+IVK + T+ V I+ME G L +++ R + S D+ I
Sbjct: 60 QEALTMRQFDHPHIVKLIGVITE--NPVWIIMELCTLGELRSFLQVR-KYSLDLASLILY 116
Query: 159 SRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCL--YESGEARHRKHGG---- 212
+ Q+ L Y+ S+ VHRDI NVL++ G L Y ++ G
Sbjct: 117 AYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 176
Query: 213 ---------YNGF--AADIWSFGVTMMELYM-GYYPF 237
+ F A+D+W FGV M E+ M G PF
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 41/225 (18%)
Query: 42 VHTEAASYGQEIDGLSQLE--KLQVLGQGNGGTVFKVRHKQTLALYALK-VMQCDRGTPP 98
V T A+ GQ D ++ +V+G G+ G V++ + + L A+K V+Q R
Sbjct: 15 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF--- 71
Query: 99 NPQELNILRQTNSPYIVKCHQIFTKPSGE------VSILMEYMDAGSLEI---YVKSRGR 149
+EL I+R+ + IV+ F SGE ++++++Y+ + Y +++
Sbjct: 72 KNRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT 130
Query: 150 LSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK 209
L + Q+ + L Y+HS I HRDIKP N+L++ L + G A+
Sbjct: 131 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD----TAVLKLCDFGSAKQLV 186
Query: 210 HGGYNG--------------FAA-------DIWSFGVTMMELYMG 233
G N F A D+WS G + EL +G
Sbjct: 187 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 231
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 41/225 (18%)
Query: 42 VHTEAASYGQEIDGLSQLE--KLQVLGQGNGGTVFKVRHKQTLALYALK-VMQCDRGTPP 98
V T A+ GQ D ++ +V+G G+ G V++ + + L A+K V+Q G
Sbjct: 3 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ---GKAF 59
Query: 99 NPQELNILRQTNSPYIVKCHQIFTKPSGE------VSILMEYMDAGSLEI---YVKSRGR 149
+EL I+R+ + IV+ F SGE ++++++Y+ + Y +++
Sbjct: 60 KNRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT 118
Query: 150 LSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK 209
L + Q+ + L Y+HS I HRDIKP N+L++ L + G A+
Sbjct: 119 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT----AVLKLCDFGSAKQLV 174
Query: 210 HGGYNG--------------FAA-------DIWSFGVTMMELYMG 233
G N F A D+WS G + EL +G
Sbjct: 175 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 41/225 (18%)
Query: 42 VHTEAASYGQEIDGLSQLE--KLQVLGQGNGGTVFKVRHKQTLALYALK-VMQCDRGTPP 98
V T A+ GQ D ++ +V+G G+ G V++ + + L A+K V+Q R
Sbjct: 41 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF--- 97
Query: 99 NPQELNILRQTNSPYIVKCHQIFTKPSGE------VSILMEYMDAGSLEI---YVKSRGR 149
+EL I+R+ + IV+ F SGE ++++++Y+ + Y +++
Sbjct: 98 KNRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT 156
Query: 150 LSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK 209
L + Q+ + L Y+HS I HRDIKP N+L++ L + G A+
Sbjct: 157 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT----AVLKLCDFGSAKQLV 212
Query: 210 HGGYNG--------------FAA-------DIWSFGVTMMELYMG 233
G N F A D+WS G + EL +G
Sbjct: 213 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 257
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 41/225 (18%)
Query: 42 VHTEAASYGQEIDGLSQLE--KLQVLGQGNGGTVFKVRHKQTLALYALK-VMQCDRGTPP 98
V T A+ GQ D ++ +V+G G+ G V++ + + L A+K V+Q R
Sbjct: 15 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF--- 71
Query: 99 NPQELNILRQTNSPYIVKCHQIFTKPSGE------VSILMEYMDAGSLEI---YVKSRGR 149
+EL I+R+ + IV+ F SGE ++++++Y+ + Y +++
Sbjct: 72 KNRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT 130
Query: 150 LSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK 209
L + Q+ + L Y+HS I HRDIKP N+L++ L + G A+
Sbjct: 131 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD----TAVLKLCDFGSAKQLV 186
Query: 210 HGGYNG--------------FAA-------DIWSFGVTMMELYMG 233
G N F A D+WS G + EL +G
Sbjct: 187 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 231
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 41/225 (18%)
Query: 42 VHTEAASYGQEIDGLSQLE--KLQVLGQGNGGTVFKVRHKQTLALYALK-VMQCDRGTPP 98
V T A+ GQ D ++ +V+G G+ G V++ + + L A+K V+Q G
Sbjct: 3 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ---GKAF 59
Query: 99 NPQELNILRQTNSPYIVKCHQIFTKPSGE------VSILMEYMDAGSLEI---YVKSRGR 149
+EL I+R+ + IV+ F SGE ++++++Y+ + Y +++
Sbjct: 60 KNRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT 118
Query: 150 LSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK 209
L + Q+ + L Y+HS I HRDIKP N+L++ L + G A+
Sbjct: 119 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT----AVLKLCDFGSAKQLV 174
Query: 210 HGGYNG--------------FAA-------DIWSFGVTMMELYMG 233
G N F A D+WS G + EL +G
Sbjct: 175 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 41/225 (18%)
Query: 42 VHTEAASYGQEIDGLSQLE--KLQVLGQGNGGTVFKVRHKQTLALYALK-VMQCDRGTPP 98
V T A+ GQ D ++ +V+G G+ G V++ + + L A+K V+Q R
Sbjct: 7 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF--- 63
Query: 99 NPQELNILRQTNSPYIVKCHQIFTKPSGE------VSILMEYMDAGSLEI---YVKSRGR 149
+EL I+R+ + IV+ F SGE ++++++Y+ + Y +++
Sbjct: 64 KNRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT 122
Query: 150 LSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK 209
L + Q+ + L Y+HS I HRDIKP N+L++ L + G A+
Sbjct: 123 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD----TAVLKLCDFGSAKQLV 178
Query: 210 HGGYNG--------------FAA-------DIWSFGVTMMELYMG 233
G N F A D+WS G + EL +G
Sbjct: 179 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 223
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 27/152 (17%)
Query: 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP------------QELN 104
S+ E + +G G GTV+K R + ALK ++ PN +E+
Sbjct: 9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRV-----PNGGGGGGGLPISTVREVA 63
Query: 105 ILRQTNS---PYIVK----CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR--LSEDII 155
+LR+ + P +V+ C T +V+++ E++D L Y+ L + I
Sbjct: 64 LLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETI 122
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLIN 187
+ RQ L+GL ++H+ IVHRD+KP N+L+
Sbjct: 123 KDLMRQFLRGLDFLHANCIVHRDLKPENILVT 154
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 41/225 (18%)
Query: 42 VHTEAASYGQEIDGLSQLE--KLQVLGQGNGGTVFKVRHKQTLALYALK-VMQCDRGTPP 98
V T A+ GQ D ++ +V+G G+ G V++ + + L A+K V+Q R
Sbjct: 31 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF--- 87
Query: 99 NPQELNILRQTNSPYIVKCHQIFTKPSGE------VSILMEYMDAGSLEI---YVKSRGR 149
+EL I+R+ + IV+ F SGE ++++++Y+ + Y +++
Sbjct: 88 KNRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT 146
Query: 150 LSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK 209
L + Q+ + L Y+HS I HRDIKP N+L++ L + G A+
Sbjct: 147 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT----AVLKLCDFGSAKQLV 202
Query: 210 HGGYNG--------------FAA-------DIWSFGVTMMELYMG 233
G N F A D+WS G + EL +G
Sbjct: 203 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 247
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 41/225 (18%)
Query: 42 VHTEAASYGQEIDGLSQLE--KLQVLGQGNGGTVFKVRHKQTLALYALK-VMQCDRGTPP 98
V T A+ GQ D ++ +V+G G+ G V++ + + L A+K V+Q R
Sbjct: 37 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF--- 93
Query: 99 NPQELNILRQTNSPYIVKCHQIFTKPSGE------VSILMEYMDAGSLEI---YVKSRGR 149
+EL I+R+ + IV+ F SGE ++++++Y+ + Y +++
Sbjct: 94 KNRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT 152
Query: 150 LSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK 209
L + Q+ + L Y+HS I HRDIKP N+L++ L + G A+
Sbjct: 153 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT----AVLKLCDFGSAKQLV 208
Query: 210 HGGYNG--------------FAA-------DIWSFGVTMMELYMG 233
G N F A D+WS G + EL +G
Sbjct: 209 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 253
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 41/225 (18%)
Query: 42 VHTEAASYGQEIDGLSQLE--KLQVLGQGNGGTVFKVRHKQTLALYALK-VMQCDRGTPP 98
V T A+ GQ D ++ +V+G G+ G V++ + + L A+K V+Q R
Sbjct: 39 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF--- 95
Query: 99 NPQELNILRQTNSPYIVKCHQIFTKPSGE------VSILMEYMDAGSLEI---YVKSRGR 149
+EL I+R+ + IV+ F SGE ++++++Y+ + Y +++
Sbjct: 96 KNRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT 154
Query: 150 LSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK 209
L + Q+ + L Y+HS I HRDIKP N+L++ L + G A+
Sbjct: 155 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT----AVLKLCDFGSAKQLV 210
Query: 210 HGGYNG--------------FAA-------DIWSFGVTMMELYMG 233
G N F A D+WS G + EL +G
Sbjct: 211 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 255
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 104/260 (40%), Gaps = 36/260 (13%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-----PQELNILRQTNSPYIVKC 117
++LG G V R + A+KV++ D P+ +E N P IV
Sbjct: 35 EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 94
Query: 118 HQI--FTKPSGEVS-ILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNI 174
+ P+G + I+MEY+D +L V + G ++ + + L + H I
Sbjct: 95 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGI 154
Query: 175 VHRDIKPANVLIN------------EKMEHPCGYSCLYES---GEARH----RKHGGYNG 215
+HRD+KPAN++I+ + G S + G A++ + G
Sbjct: 155 IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVD 214
Query: 216 FAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275
+D++S G + E+ G PF G P ++ RE P P E +
Sbjct: 215 ARSDVYSLGCVLYEVLTGEPPFT--GDSPVSVAYQ---HVREDPIPPSARHEGLSADLDA 269
Query: 276 CLQKG---DPSKRW-TASQL 291
+ K +P R+ TA+++
Sbjct: 270 VVLKALAKNPENRYQTAAEM 289
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 77/151 (50%), Gaps = 12/151 (7%)
Query: 47 ASYGQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLAL--YALKVMQCDRGTPPNPQELN 104
+S + ++ L + E +V G+G G V+K + K YALK ++ + +E+
Sbjct: 12 SSERERVEDLFEYEGCKV-GRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIA 70
Query: 105 ILRQTNSPYIVKCHQIF-TKPSGEVSILMEYMDAGSLEIYVKSRG--------RLSEDII 155
+LR+ P ++ ++F + +V +L +Y + I R +L ++
Sbjct: 71 LLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMV 130
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLI 186
++ Q+L G+ Y+H+ ++HRD+KPAN+L+
Sbjct: 131 KSLLYQILDGIHYLHANWVLHRDLKPANILV 161
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 69/138 (50%), Gaps = 17/138 (12%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALK--------VMQCDRGTPPNPQELNILRQTNSPYI 114
++G+G+ G V+ K A+K ++ C R +E+ IL + S YI
Sbjct: 34 HLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRIL----REITILNRLKSDYI 89
Query: 115 VKCHQIFTKPS----GEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMH 170
++ H + E+ I++E D+ +++ K+ L+E + TI +L G ++H
Sbjct: 90 IRLHDLIIPEDLLKFDELYIVLEIADSDLKKLF-KTPIFLTEQHVKTILYNLLLGEKFIH 148
Query: 171 SRNIVHRDIKPANVLINE 188
I+HRD+KPAN L+N+
Sbjct: 149 ESGIIHRDLKPANCLLNQ 166
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 41/225 (18%)
Query: 42 VHTEAASYGQEIDGLSQLE--KLQVLGQGNGGTVFKVRHKQTLALYALK-VMQCDRGTPP 98
V T A+ GQ D ++ +V+G G+ G V++ + + L A+K V+Q R
Sbjct: 8 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF--- 64
Query: 99 NPQELNILRQTNSPYIVKCHQIFTKPSGE------VSILMEYMDAGSLEI---YVKSRGR 149
+EL I+R+ + IV+ F SGE ++++++Y+ + Y +++
Sbjct: 65 KNRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT 123
Query: 150 LSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK 209
L + Q+ + L Y+HS I HRDIKP N+L++ L + G A+
Sbjct: 124 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD----TAVLKLCDFGSAKQLV 179
Query: 210 HGGYNG--------------FAA-------DIWSFGVTMMELYMG 233
G N F A D+WS G + EL +G
Sbjct: 180 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 224
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 41/225 (18%)
Query: 42 VHTEAASYGQEIDGLSQLE--KLQVLGQGNGGTVFKVRHKQTLALYALK-VMQCDRGTPP 98
V T A+ GQ D ++ +V+G G+ G V++ + + L A+K V+Q R
Sbjct: 37 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF--- 93
Query: 99 NPQELNILRQTNSPYIVKCHQIFTKPSGE------VSILMEYMDAGSLEI---YVKSRGR 149
+EL I+R+ + IV+ F SGE ++++++Y+ + Y +++
Sbjct: 94 KNRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT 152
Query: 150 LSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK 209
L + Q+ + L Y+HS I HRDIKP N+L++ L + G A+
Sbjct: 153 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT----AVLKLCDFGSAKQLV 208
Query: 210 HGGYNG--------------FAA-------DIWSFGVTMMELYMG 233
G N F A D+WS G + EL +G
Sbjct: 209 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 253
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 41/225 (18%)
Query: 42 VHTEAASYGQEIDGLSQLE--KLQVLGQGNGGTVFKVRHKQTLALYALK-VMQCDRGTPP 98
V T A+ GQ D ++ +V+G G+ G V++ + + L A+K V+Q R
Sbjct: 82 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF--- 138
Query: 99 NPQELNILRQTNSPYIVKCHQIFTKPSGE------VSILMEYMDAGSLEI---YVKSRGR 149
+EL I+R+ + IV+ F SGE ++++++Y+ + Y +++
Sbjct: 139 KNRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT 197
Query: 150 LSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK 209
L + Q+ + L Y+HS I HRDIKP N+L++ L + G A+
Sbjct: 198 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD----TAVLKLCDFGSAKQLV 253
Query: 210 HGGYNG--------------FAA-------DIWSFGVTMMELYMG 233
G N F A D+WS G + EL +G
Sbjct: 254 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 298
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 38/231 (16%)
Query: 35 PVSCPNLVHTEAASYGQ-EIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCD 93
P+ N T YG EID L L+ LG G G V ++ + Y + +
Sbjct: 2 PLGSKNAPSTAGLGYGSWEIDP-KDLTFLKELGTGQFGVV---KYGKWRGQYDVAIKMIK 57
Query: 94 RGTPPNPQ---ELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGR 149
G+ + E ++ + +V+ + + TK + I+ EYM G L Y++ R R
Sbjct: 58 EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR-PIFIITEYMANGCLLNYLREMRHR 116
Query: 150 LSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK 209
+ + + V + + Y+ S+ +HRD+ N L+N++ G + + G +R+
Sbjct: 117 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQ-----GVVKVSDFGLSRYVL 171
Query: 210 HGGYNGFA----------------------ADIWSFGVTMMELY-MGYYPF 237
Y +DIW+FGV M E+Y +G P+
Sbjct: 172 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 222
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 77/153 (50%), Gaps = 9/153 (5%)
Query: 39 PNLVHTEAASYGQEIDGLSQLEKLQVLGQGNGGTVFK---VRHKQTLALYALKVMQCDRG 95
P + AA ID ++ KL G+G G V+K +T+A+ +++ + G
Sbjct: 19 PGSMSVSAAPSATSIDRYRRITKL---GEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEG 75
Query: 96 TPPNP-QELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDI 154
P +E+++L++ I++ + + + ++ EY + L+ Y+ +S +
Sbjct: 76 VPGTAIREVSLLKELQHRNIIELKSVIHH-NHRLHLIFEYAE-NDLKKYMDKNPDVSMRV 133
Query: 155 ICTISRQVLKGLFYMHSRNIVHRDIKPANVLIN 187
I + Q++ G+ + HSR +HRD+KP N+L++
Sbjct: 134 IKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLS 166
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 98/231 (42%), Gaps = 38/231 (16%)
Query: 35 PVSCPNLVHTEAASYGQ-EIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCD 93
P+ N T YG EID L L+ LG G G V ++ + Y + +
Sbjct: 2 PLGSKNAPSTAGLGYGSWEIDP-KDLTFLKELGTGQFGVV---KYGKWRGQYDVAIKMIK 57
Query: 94 RGTPPNPQ---ELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGR 149
G+ + E ++ + +V+ + + TK + I+ EYM G L Y++ R R
Sbjct: 58 EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR-PIFIITEYMANGCLLNYLREMRHR 116
Query: 150 LSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRK 209
+ + + V + + Y+ S+ +HRD+ N L+N++ G + + G +R+
Sbjct: 117 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQ-----GVVKVSDFGLSRYVL 171
Query: 210 HGG--------------------YNGFA--ADIWSFGVTMMELY-MGYYPF 237
Y+ F+ +DIW+FGV M E+Y +G P+
Sbjct: 172 DDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 222
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 113/262 (43%), Gaps = 39/262 (14%)
Query: 57 SQLEKLQVLGQGNGGTVFK---VRHKQTLALYALKVMQCDRGTP------PNPQELNILR 107
+++E + +G+G G V K V+ K +A+ +L + + T +E+ I+
Sbjct: 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMS 78
Query: 108 QTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR-LSEDIICTISRQVLKGL 166
N P IVK + + P ++ME++ G L + + + + + + G+
Sbjct: 79 NLNHPNIVKLYGLMHNPP---RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGI 135
Query: 167 FYMHSRN--IVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKH------GGYNGFA- 217
YM ++N IVHRD++ N+ + E+ + + + G ++ H G + A
Sbjct: 136 EYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMAP 195
Query: 218 -------------ADIWSFGVTMMELYMGYYPFLEPGQ-EPDFLSLMLAICFREPPSLPE 263
AD +SF + + + G PF E + F++++ R P++PE
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLR--PTIPE 253
Query: 264 CSSEKFRDFIRCCLQKGDPSKR 285
+ R+ I C GDP KR
Sbjct: 254 DCPPRLRNVIELCWS-GDPKKR 274
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 88/208 (42%), Gaps = 33/208 (15%)
Query: 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYA-----LKVMQCDRGTPPNPQELNILRQTNS 111
+ + +VLG+G G V + + T +YA K ++ +G E IL + NS
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 112 PYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR--LSEDIICTISRQVLKGLFYM 169
++V + + +++ M+ G L+ ++ G+ E + ++ GL +
Sbjct: 244 RFVVSLAYAYETKDA-LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDL 302
Query: 170 HSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHG----------GYNG---- 215
H IV+RD+KP N+L+++ G+ + + G A H G GY
Sbjct: 303 HRERIVYRDLKPENILLDDH-----GHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVV 357
Query: 216 ------FAADIWSFGVTMMELYMGYYPF 237
F+ D W+ G + E+ G PF
Sbjct: 358 KNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 88/208 (42%), Gaps = 33/208 (15%)
Query: 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYA-----LKVMQCDRGTPPNPQELNILRQTNS 111
+ + +VLG+G G V + + T +YA K ++ +G E IL + NS
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 112 PYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR--LSEDIICTISRQVLKGLFYM 169
++V + + +++ M+ G L+ ++ G+ E + ++ GL +
Sbjct: 244 RFVVSLAYAYETKDA-LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDL 302
Query: 170 HSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHG----------GYNG---- 215
H IV+RD+KP N+L+++ G+ + + G A H G GY
Sbjct: 303 HRERIVYRDLKPENILLDDH-----GHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVV 357
Query: 216 ------FAADIWSFGVTMMELYMGYYPF 237
F+ D W+ G + E+ G PF
Sbjct: 358 KNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 108/248 (43%), Gaps = 28/248 (11%)
Query: 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKC 117
++E +V+G+G G V K + + A+K ++ + EL L + N P IVK
Sbjct: 10 EIEVEEVVGRGAFGVVCKAKWRAKDV--AIKQIESESERKAFIVELRQLSRVNHPNIVKL 67
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRL---SEDIICTISRQVLKGLFYMHS--- 171
+ P V ++MEY + GSL + L + + Q +G+ Y+HS
Sbjct: 68 YGACLNP---VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 124
Query: 172 RNIVHRDIKPANVLI--NEKMEHPC--GYSCLYESGEARHRKHGGYNG----------FA 217
+ ++HRD+KP N+L+ + C G +C ++ ++ +
Sbjct: 125 KALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEK 184
Query: 218 ADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCL 277
D++S+G+ + E+ PF E G P F +M A+ P L + + + C
Sbjct: 185 CDVFSWGIILWEVITRRKPFDEIGG-PAF-RIMWAVHNGTRPPLIKNLPKPIESLMTRCW 242
Query: 278 QKGDPSKR 285
K DPS+R
Sbjct: 243 SK-DPSQR 249
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 112/266 (42%), Gaps = 54/266 (20%)
Query: 63 QVLGQGNGGTVFKVRHKQ---TLALYALKVMQCDRGTPPNPQEL----NILRQTNSPYIV 115
++LG+G G+V + + KQ + A+K+++ D + +E +++ + P++
Sbjct: 29 RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVA 88
Query: 116 KCH--QIFTKPSGEVSI---LMEYMDAGSLEIYVKSRGRLSED-------IICTISRQVL 163
K + ++ G + I ++ +M G L ++ + R+ E+ + +
Sbjct: 89 KLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLA-SRIGENPFNLPLQTLVRFMVDIA 147
Query: 164 KGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGY--NGFA---- 217
G+ Y+ SRN +HRD+ N ++ E M C+ + G +R G Y G A
Sbjct: 148 CGMEYLSSRNFIHRDLAARNCMLAEDMT-----VCVADFGLSRKIYSGDYYRQGCASKLP 202
Query: 218 -----------------ADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPP 259
+D+W+FGVTM E+ G P+ + L+ ++P
Sbjct: 203 VKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQP- 261
Query: 260 SLPECSSEKFRDFIRCCLQKGDPSKR 285
PEC E + +C DP +R
Sbjct: 262 --PECMEEVYDLMYQC--WSADPKQR 283
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 113/262 (43%), Gaps = 39/262 (14%)
Query: 57 SQLEKLQVLGQGNGGTVFK---VRHKQTLALYALKVMQCDRGTP------PNPQELNILR 107
+++E + +G+G G V K V+ K +A+ +L + + T +E+ I+
Sbjct: 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMS 78
Query: 108 QTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR-LSEDIICTISRQVLKGL 166
N P IVK + + P ++ME++ G L + + + + + + G+
Sbjct: 79 NLNHPNIVKLYGLMHNPP---RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGI 135
Query: 167 FYMHSRN--IVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKH------GGYNGFA- 217
YM ++N IVHRD++ N+ + E+ + + + G ++ H G + A
Sbjct: 136 EYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAP 195
Query: 218 -------------ADIWSFGVTMMELYMGYYPFLEPGQ-EPDFLSLMLAICFREPPSLPE 263
AD +SF + + + G PF E + F++++ R P++PE
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLR--PTIPE 253
Query: 264 CSSEKFRDFIRCCLQKGDPSKR 285
+ R+ I C GDP KR
Sbjct: 254 DCPPRLRNVIELCWS-GDPKKR 274
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 108/248 (43%), Gaps = 28/248 (11%)
Query: 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKC 117
++E +V+G+G G V K + + A+K ++ + EL L + N P IVK
Sbjct: 9 EIEVEEVVGRGAFGVVCKAKWRAKDV--AIKQIESESERKAFIVELRQLSRVNHPNIVKL 66
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRL---SEDIICTISRQVLKGLFYMHS--- 171
+ P V ++MEY + GSL + L + + Q +G+ Y+HS
Sbjct: 67 YGACLNP---VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 123
Query: 172 RNIVHRDIKPANVLI--NEKMEHPC--GYSCLYESGEARHRKHGGYNG----------FA 217
+ ++HRD+KP N+L+ + C G +C ++ ++ +
Sbjct: 124 KALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEK 183
Query: 218 ADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCL 277
D++S+G+ + E+ PF E G P F +M A+ P L + + + C
Sbjct: 184 CDVFSWGIILWEVITRRKPFDEIGG-PAF-RIMWAVHNGTRPPLIKNLPKPIESLMTRCW 241
Query: 278 QKGDPSKR 285
K DPS+R
Sbjct: 242 SK-DPSQR 248
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 107/247 (43%), Gaps = 37/247 (14%)
Query: 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDR-GTPPNPQELNILRQTNSPYIVKCHQIFT- 122
LG G G V+ K+ A+K ++ D +E ++++ P +V+ + T
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTL 99
Query: 123 KPSGEVSILMEYMDAGSLEIYVK--SRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIK 180
+P I+ EYM G+L Y++ +R ++ ++ ++ Q+ + Y+ +N +HRD+
Sbjct: 100 EPP--FYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLA 157
Query: 181 PANVLINEK---MEHPCGYSCLYESGEARHRKHGG--------------YNGFA--ADIW 221
N L+ E G S L +G+ + H G YN F+ +D+W
Sbjct: 158 ARNCLVGENHVVKVADFGLSRLM-TGDT-YTAHAGAKFPIKWTAPESLAYNTFSIKSDVW 215
Query: 222 SFGVTMMELY---MGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQ 278
+FGV + E+ M YP ++ Q D L + PE K + +R C
Sbjct: 216 AFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRM------EQPEGCPPKVYELMRACW- 268
Query: 279 KGDPSKR 285
K P+ R
Sbjct: 269 KWSPADR 275
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 96/228 (42%), Gaps = 57/228 (25%)
Query: 57 SQLEKLQVLGQGNGGTVFKVRHKQTL-----ALYALKVMQCDRGTPPNP---QELNILRQ 108
+ +E ++ +G+G G VF+ R L + A+K+++ + +E ++ +
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 109 TNSPYIVKCHQI--FTKPSGEVSILMEYMDAGSLEIYVKS----------------RGRL 150
++P IVK + KP + +L EYM G L +++S R R+
Sbjct: 107 FDNPNIVKLLGVCAVGKP---MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARV 163
Query: 151 SE---------DIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG------ 195
S + +C I+RQV G+ Y+ R VHRD+ N L+ E M
Sbjct: 164 SSPGPPPLSCAEQLC-IARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSR 222
Query: 196 --YSCLYESGEARHR--------KHGGYNGFA--ADIWSFGVTMMELY 231
YS Y + + YN + +D+W++GV + E++
Sbjct: 223 NIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 270
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 118/299 (39%), Gaps = 53/299 (17%)
Query: 48 SYGQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP--QELNI 105
S+ + + QL++ VLG+G V + T YA+K+++ G + +E+ +
Sbjct: 5 SFSGRFEDVYQLQE-DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEM 63
Query: 106 LRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKG 165
L Q V F + ++ E M GS+ ++ R +E + + V
Sbjct: 64 LYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASA 123
Query: 166 LFYMHSRNIVHRDIKPANVLINE------------------------------KMEHPCG 195
L ++H++ I HRD+KP N+L ++ PCG
Sbjct: 124 LDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCG 183
Query: 196 YSCLY---ESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFL---------EPGQE 243
S Y E EA + Y+ D+WS GV + L GY PF+ + G+
Sbjct: 184 -SAEYMAPEVVEAFSEEASIYDK-RCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEA 241
Query: 244 PDFLSLMLAICFRE-----PPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297
ML +E P S +D I L + D +R +A+Q+L HP++
Sbjct: 242 CPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVR-DAKQRLSAAQVLQHPWV 299
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 118/299 (39%), Gaps = 53/299 (17%)
Query: 48 SYGQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNP--QELNI 105
S+ + + QL++ VLG+G V + T YA+K+++ G + +E+ +
Sbjct: 5 SFSGRFEDVYQLQE-DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEM 63
Query: 106 LRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKG 165
L Q V F + ++ E M GS+ ++ R +E + + V
Sbjct: 64 LYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASA 123
Query: 166 LFYMHSRNIVHRDIKPANVLINE------------------------------KMEHPCG 195
L ++H++ I HRD+KP N+L ++ PCG
Sbjct: 124 LDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCG 183
Query: 196 YSCLY---ESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFL---------EPGQE 243
S Y E EA + Y+ D+WS GV + L GY PF+ + G+
Sbjct: 184 -SAEYMAPEVVEAFSEEASIYDK-RCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEA 241
Query: 244 PDFLSLMLAICFRE-----PPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297
ML +E P S +D I L + D +R +A+Q+L HP++
Sbjct: 242 CPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVR-DAKQRLSAAQVLQHPWV 299
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 111/262 (42%), Gaps = 39/262 (14%)
Query: 57 SQLEKLQVLGQGNGGTVFK---VRHKQTLALYALKVMQCDRGTP------PNPQELNILR 107
+++E + +G+G G V K V+ K +A+ +L + + T +E+ I+
Sbjct: 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMS 78
Query: 108 QTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR-LSEDIICTISRQVLKGL 166
N P IVK + + P ++ME++ G L + + + + + + G+
Sbjct: 79 NLNHPNIVKLYGLMHNPP---RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGI 135
Query: 167 FYMHSRN--IVHRDIKPANVLINEKMEHP--CGYSCLYE-SGEARHRKHGGYNGF----- 216
YM ++N IVHRD++ N+ + E+ C + S ++ H G F
Sbjct: 136 EYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMAP 195
Query: 217 ------------AADIWSFGVTMMELYMGYYPFLEPGQ-EPDFLSLMLAICFREPPSLPE 263
AD +SF + + + G PF E + F++++ R P++PE
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLR--PTIPE 253
Query: 264 CSSEKFRDFIRCCLQKGDPSKR 285
+ R+ I C GDP KR
Sbjct: 254 DCPPRLRNVIELCWS-GDPKKR 274
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 119/273 (43%), Gaps = 55/273 (20%)
Query: 64 VLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPP----NPQELNILRQTNS-PYIVKCH 118
VLG G GT+ ++ + + R P +E+ +LR+++ P +++
Sbjct: 31 VLGHGAEGTIV------YRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIR-- 82
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSR--GRLSEDIICTISRQVLKGLFYMHSRNIVH 176
T+ + + + A +L+ YV+ + L + I T+ +Q GL ++HS NIVH
Sbjct: 83 YFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPI-TLLQQTTSGLAHLHSLNIVH 141
Query: 177 RDIKPANVLINEKMEHPCGYSCLYESG------EARH---RKHG--GYNGFAA------- 218
RD+KP N+LI+ H + + + G RH R+ G G G+ A
Sbjct: 142 RDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSED 201
Query: 219 ---------DIWSFG-VTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEK 268
DI+S G V + G +PF + Q +++L C SL EK
Sbjct: 202 CKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ--ANILLGAC-----SLDCLHPEK 254
Query: 269 FRDFI-RCCLQK---GDPSKRWTASQLLSHPFL 297
D I R ++K DP KR +A +L HPF
Sbjct: 255 HEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 52/209 (24%)
Query: 125 SGEVSILMEYMDAGSLEIYVKSRG----------------RLSEDIICTISRQVLKGLFY 168
G + +++EY G+L Y+++R +LS + + + QV +G+ Y
Sbjct: 106 DGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEY 165
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGY-----NG-------- 215
+ S+ +HRD+ NVL+ E + + G AR H Y NG
Sbjct: 166 LASKKCIHRDLAARNVLVTED-----NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMA 220
Query: 216 ----------FAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFR-EPPSLPE 263
+D+WSFGV + E++ +G P+ PG + L +L R + PS
Sbjct: 221 PEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY--PGVPVEELFKLLKEGHRMDKPS--N 276
Query: 264 CSSEKFRDFIRCCLQKGDPSKRWTASQLL 292
C++E + +R C PS+R T QL+
Sbjct: 277 CTNELYM-MMRDCWH-AVPSQRPTFKQLV 303
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 37/162 (22%)
Query: 157 TISRQVLKGLFYMHSRNIVHRDIKPANVLINE-KMEHPCGYSCLYESGEARHRKHGG--- 212
+ S QV KG+ ++ S+N +HRD+ N+L+ ++ C + G ARH K+
Sbjct: 172 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDF------GLARHIKNDSNYV 225
Query: 213 -----------------YN---GFAADIWSFGVTMMELY-MGYYPFLEPGQEPDF-LSLM 250
+N F +D+WS+G+ + EL+ +G P+ PG D M
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY--PGMPVDSKFYKM 283
Query: 251 LAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLL 292
+ FR PE + + D ++ C DP KR T Q++
Sbjct: 284 IKEGFRMLS--PEHAPAEMYDIMKTCWD-ADPLKRPTFKQIV 322
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 52/209 (24%)
Query: 125 SGEVSILMEYMDAGSLEIYVKSR----------------GRLSEDIICTISRQVLKGLFY 168
G + +++EY G+L Y+++R +LS + + + QV +G+ Y
Sbjct: 106 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEY 165
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGY-----NG-------- 215
+ S+ +HRD+ NVL+ E + + G AR H Y NG
Sbjct: 166 LASKKCIHRDLAARNVLVTED-----NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMA 220
Query: 216 ----------FAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFR-EPPSLPE 263
+D+WSFGV + E++ +G P+ PG + L +L R + PS
Sbjct: 221 PEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY--PGVPVEELFKLLKEGHRMDKPS--N 276
Query: 264 CSSEKFRDFIRCCLQKGDPSKRWTASQLL 292
C++E + +R C PS+R T QL+
Sbjct: 277 CTNELYM-MMRDCWH-AVPSQRPTFKQLV 303
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 73/144 (50%), Gaps = 17/144 (11%)
Query: 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALK--------VMQCDRGTPPNPQELNILRQ 108
+ E ++G G+ G V + K + A+K ++ C R +E+ IL +
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRIL----REIAILNR 108
Query: 109 TNSPYIVKCHQIF----TKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLK 164
N ++VK I + E+ +++E D+ +++ ++ L+E I T+ +L
Sbjct: 109 LNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLF-RTPVYLTELHIKTLLYNLLV 167
Query: 165 GLFYMHSRNIVHRDIKPANVLINE 188
G+ Y+HS I+HRD+KPAN L+N+
Sbjct: 168 GVKYVHSAGILHRDLKPANCLVNQ 191
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 52/209 (24%)
Query: 125 SGEVSILMEYMDAGSLEIYVKSR----------------GRLSEDIICTISRQVLKGLFY 168
G + +++EY G+L Y+++R +LS + + + QV +G+ Y
Sbjct: 99 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEY 158
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGY-----NG-------- 215
+ S+ +HRD+ NVL+ E + + G AR H Y NG
Sbjct: 159 LASKKCIHRDLAARNVLVTED-----NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMA 213
Query: 216 ----------FAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFR-EPPSLPE 263
+D+WSFGV + E++ +G P+ PG + L +L R + PS
Sbjct: 214 PEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY--PGVPVEELFKLLKEGHRMDKPS--N 269
Query: 264 CSSEKFRDFIRCCLQKGDPSKRWTASQLL 292
C++E + +R C PS+R T QL+
Sbjct: 270 CTNELYM-MMRDCWH-AVPSQRPTFKQLV 296
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 52/209 (24%)
Query: 125 SGEVSILMEYMDAGSLEIYVKSR----------------GRLSEDIICTISRQVLKGLFY 168
G + +++EY G+L Y+++R +LS + + + QV +G+ Y
Sbjct: 95 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEY 154
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGY-----NG-------- 215
+ S+ +HRD+ NVL+ E + + G AR H Y NG
Sbjct: 155 LASKKCIHRDLAARNVLVTED-----NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMA 209
Query: 216 ----------FAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFR-EPPSLPE 263
+D+WSFGV + E++ +G P+ PG + L +L R + PS
Sbjct: 210 PEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY--PGVPVEELFKLLKEGHRMDKPS--N 265
Query: 264 CSSEKFRDFIRCCLQKGDPSKRWTASQLL 292
C++E + +R C PS+R T QL+
Sbjct: 266 CTNELYM-MMRDCWH-AVPSQRPTFKQLV 292
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 52/209 (24%)
Query: 125 SGEVSILMEYMDAGSLEIYVKSR----------------GRLSEDIICTISRQVLKGLFY 168
G + +++EY G+L Y+++R +LS + + + QV +G+ Y
Sbjct: 91 DGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEY 150
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGY-----NG-------- 215
+ S+ +HRD+ NVL+ E + + G AR H Y NG
Sbjct: 151 LASKKCIHRDLAARNVLVTED-----NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMA 205
Query: 216 ----------FAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFR-EPPSLPE 263
+D+WSFGV + E++ +G P+ PG + L +L R + PS
Sbjct: 206 PEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY--PGVPVEELFKLLKEGHRMDKPS--N 261
Query: 264 CSSEKFRDFIRCCLQKGDPSKRWTASQLL 292
C++E + +R C PS+R T QL+
Sbjct: 262 CTNELYM-MMRDCWH-AVPSQRPTFKQLV 288
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 86/205 (41%), Gaps = 39/205 (19%)
Query: 65 LGQGNGGTVFKVR-----HKQTLALYALKVMQ--CDRGTPPNPQELNILRQTNSPYIVKC 117
LG+G G VF +Q L A+K ++ D +E +L +IVK
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRG-------------RLSEDIICTISRQVLK 164
+ + + + ++ EYM G L ++++ G L++ + I++Q+
Sbjct: 81 YGVCVE-GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAA 139
Query: 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCG-YSCLYESGEARHRKHGG----------- 212
G+ Y+ S++ VHRD+ N L+ E + G + + + + GG
Sbjct: 140 GMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPP 199
Query: 213 ----YNGFA--ADIWSFGVTMMELY 231
Y F +D+WS GV + E++
Sbjct: 200 ESIMYRKFTTESDVWSLGVVLWEIF 224
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 52/209 (24%)
Query: 125 SGEVSILMEYMDAGSLEIYVKSR----------------GRLSEDIICTISRQVLKGLFY 168
G + +++EY G+L Y+++R +LS + + + QV +G+ Y
Sbjct: 106 DGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEY 165
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGY-----NG-------- 215
+ S+ +HRD+ NVL+ E + + G AR H Y NG
Sbjct: 166 LASKKCIHRDLAARNVLVTED-----NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMA 220
Query: 216 ----------FAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFR-EPPSLPE 263
+D+WSFGV + E++ +G P+ PG + L +L R + PS
Sbjct: 221 PEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY--PGVPVEELFKLLKEGHRMDKPS--N 276
Query: 264 CSSEKFRDFIRCCLQKGDPSKRWTASQLL 292
C++E + +R C PS+R T QL+
Sbjct: 277 CTNELYM-MMRDCWH-AVPSQRPTFKQLV 303
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 109/288 (37%), Gaps = 60/288 (20%)
Query: 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQI-- 120
++LG+G V Q YA+K+++ G + + R+ + Y + ++
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRS----RVFREVETLYQCQGNKNIL 74
Query: 121 ----FTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVH 176
F + ++ E + GS+ +++ + +E + R V L ++H++ I H
Sbjct: 75 ELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAH 134
Query: 177 RDIKPANVLINE------------------------------KMEHPCGYSCLYESGEAR 206
RD+KP N+L ++ PCG S Y + E
Sbjct: 135 RDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCG-SAEYMAPEVV 193
Query: 207 H--RKHGGYNGFAADIWSFGVTMMELYMGYYPFL---------EPG------QEPDFLSL 249
+ D+WS GV + + GY PF+ + G Q F S+
Sbjct: 194 EVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESI 253
Query: 250 MLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297
SSE +D I L + D +R +A+Q+L HP++
Sbjct: 254 QEGKYEFPDKDWAHISSEA-KDLISKLLVR-DAKQRLSAAQVLQHPWV 299
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 110/259 (42%), Gaps = 35/259 (13%)
Query: 63 QVLGQGNGGTVF------KVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVK 116
+V+G+G+ G V+ + +++ A+ +L + + +E ++R N P ++
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKS--RGRLSEDIICTISRQVLKGLFYMHSRNI 174
I P G +L+ YM G L +++S R +D+I + QV +G+ Y+ +
Sbjct: 87 LIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLI-SFGLQVARGMEYLAEQKF 145
Query: 175 VHRDIKPANVLINEKMEHPCGYSCL---------YESGEARH-RKHGGYNGF-------- 216
VHRD+ N +++E L Y + RH R +
Sbjct: 146 VHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRF 205
Query: 217 --AADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFI 273
+D+WSFGV + EL G P+ +P L+ LA R P PE + +
Sbjct: 206 TTKSDVWSFGVLLWELLTRGAPPYRHI--DPFDLTHFLAQGRRLPQ--PEYCPDSLYQVM 261
Query: 274 RCCLQKGDPSKRWTASQLL 292
+ C + DP+ R T L+
Sbjct: 262 QQCWE-ADPAVRPTFRVLV 279
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 52/209 (24%)
Query: 125 SGEVSILMEYMDAGSLEIYVKSR----------------GRLSEDIICTISRQVLKGLFY 168
G + +++EY G+L Y+++R +LS + + + QV +G+ Y
Sbjct: 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEY 206
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGY-----NG-------- 215
+ S+ +HRD+ NVL+ E + + G AR H Y NG
Sbjct: 207 LASKKCIHRDLAARNVLVTED-----NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMA 261
Query: 216 ----------FAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFR-EPPSLPE 263
+D+WSFGV + E++ +G P+ PG + L +L R + PS
Sbjct: 262 PEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY--PGVPVEELFKLLKEGHRMDKPS--N 317
Query: 264 CSSEKFRDFIRCCLQKGDPSKRWTASQLL 292
C++E + +R C PS+R T QL+
Sbjct: 318 CTNELYM-MMRDCWH-AVPSQRPTFKQLV 344
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 52/209 (24%)
Query: 125 SGEVSILMEYMDAGSLEIYVKSR----------------GRLSEDIICTISRQVLKGLFY 168
G + +++EY G+L Y+++R +LS + + + QV +G+ Y
Sbjct: 98 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEY 157
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGY-----NG-------- 215
+ S+ +HRD+ NVL+ E + + G AR H Y NG
Sbjct: 158 LASKKCIHRDLAARNVLVTED-----NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMA 212
Query: 216 ----------FAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFR-EPPSLPE 263
+D+WSFGV + E++ +G P+ PG + L +L R + PS
Sbjct: 213 PEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY--PGVPVEELFKLLKEGHRMDKPS--N 268
Query: 264 CSSEKFRDFIRCCLQKGDPSKRWTASQLL 292
C++E + +R C PS+R T QL+
Sbjct: 269 CTNELYM-MMRDCWH-AVPSQRPTFKQLV 295
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 92/222 (41%), Gaps = 38/222 (17%)
Query: 44 TEAASYGQ-EIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ- 101
T YG EID L L+ LG G G V ++ + Y + + G+ +
Sbjct: 2 TAGLGYGSWEIDP-KDLTFLKELGTGQFGVV---KYGKWRGQYDVAIKMIKEGSMSEDEF 57
Query: 102 --ELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTI 158
E ++ + +V+ + + TK + I+ EYM G L Y++ R R + +
Sbjct: 58 IEEAKVMMNLSHEKLVQLYGVCTKQR-PIFIITEYMANGCLLNYLREMRHRFQTQQLLEM 116
Query: 159 SRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFA- 217
+ V + + Y+ S+ +HRD+ N L+N++ G + + G +R+ Y
Sbjct: 117 CKDVCEAMEYLESKQFLHRDLAARNCLVNDQ-----GVVKVSDFGLSRYVLDDEYTSSVG 171
Query: 218 ---------------------ADIWSFGVTMMELY-MGYYPF 237
+DIW+FGV M E+Y +G P+
Sbjct: 172 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 213
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 26/207 (12%)
Query: 65 LGQGNGGTVFK-VRHKQTLALYALKVM---QCDRGTPPNPQELNILRQTNSPYIVKCHQI 120
+G+G G V+K + T+A+ L M + QE+ ++ + +V+
Sbjct: 33 MGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG- 91
Query: 121 FTKPSGEVSILMEYMDAGSLEIYVKSRGR---LSEDIICTISRQVLKGLFYMHSRNIVHR 177
F+ ++ ++ YM GSL + LS + C I++ G+ ++H + +HR
Sbjct: 92 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHR 151
Query: 178 DIKPANVLINEKMEHPCGYSCLYESGE-----ARHRKHGGYNGFAA------------DI 220
DIK AN+L++E L + E + G + A DI
Sbjct: 152 DIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRGEITPKSDI 211
Query: 221 WSFGVTMMELYMGYYPFLEPGQEPDFL 247
+SFGV ++E+ G P ++ +EP L
Sbjct: 212 YSFGVVLLEIITG-LPAVDEHREPQLL 237
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 26/207 (12%)
Query: 65 LGQGNGGTVFK-VRHKQTLALYALKVM---QCDRGTPPNPQELNILRQTNSPYIVKCHQI 120
+G+G G V+K + T+A+ L M + QE+ ++ + +V+
Sbjct: 39 MGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG- 97
Query: 121 FTKPSGEVSILMEYMDAGSLEIYVKSRGR---LSEDIICTISRQVLKGLFYMHSRNIVHR 177
F+ ++ ++ YM GSL + LS + C I++ G+ ++H + +HR
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHR 157
Query: 178 DIKPANVLINEKMEHPCGYSCLYESGE-----ARHRKHGGYNGFAA------------DI 220
DIK AN+L++E L + E + G + A DI
Sbjct: 158 DIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRGEITPKSDI 217
Query: 221 WSFGVTMMELYMGYYPFLEPGQEPDFL 247
+SFGV ++E+ G P ++ +EP L
Sbjct: 218 YSFGVVLLEIITG-LPAVDEHREPQLL 243
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 26/207 (12%)
Query: 65 LGQGNGGTVFK-VRHKQTLALYALKVM---QCDRGTPPNPQELNILRQTNSPYIVKCHQI 120
+G+G G V+K + T+A+ L M + QE+ ++ + +V+
Sbjct: 39 MGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG- 97
Query: 121 FTKPSGEVSILMEYMDAGSLEIYVKSRGR---LSEDIICTISRQVLKGLFYMHSRNIVHR 177
F+ ++ ++ YM GSL + LS + C I++ G+ ++H + +HR
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHR 157
Query: 178 DIKPANVLINEKMEHPCGYSCLYESGE-----ARHRKHGGYNGFAA------------DI 220
DIK AN+L++E L + E + G + A DI
Sbjct: 158 DIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRGEITPKSDI 217
Query: 221 WSFGVTMMELYMGYYPFLEPGQEPDFL 247
+SFGV ++E+ G P ++ +EP L
Sbjct: 218 YSFGVVLLEIITG-LPAVDEHREPQLL 243
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 31/166 (18%)
Query: 101 QELNILRQTNSPYIVKCHQIFTKPSG-----EVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +++ N I+ +FT +V I+ME MDA ++ + L + +
Sbjct: 72 RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI---QMELDHERM 128
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEK------------------MEHPCGYS 197
+ Q+L G+ ++HS I+HRD+KP+N+++ M P +
Sbjct: 129 SYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVT 188
Query: 198 CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQE 243
Y + E GY DIWS GV M E+ G F PG +
Sbjct: 189 RYYRAPEVILGM--GYKE-NVDIWSVGVIMGEMIKGGVLF--PGTD 229
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 85/203 (41%), Gaps = 36/203 (17%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ---ELNILRQTNSPYIVKCH 118
L+ LG G G V ++ + Y + + G+ + E ++ + +V+ +
Sbjct: 13 LKELGTGQFGVV---KYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLY 69
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ TK + I+ EYM G L Y++ R R + + + V + + Y+ S+ +HR
Sbjct: 70 GVCTKQR-PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 128
Query: 178 DIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFA-------------------- 217
D+ N L+N++ G + + G +R+ Y
Sbjct: 129 DLAARNCLVNDQ-----GVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 183
Query: 218 --ADIWSFGVTMMELY-MGYYPF 237
+DIW+FGV M E+Y +G P+
Sbjct: 184 SKSDIWAFGVLMWEIYSLGKMPY 206
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 31/166 (18%)
Query: 101 QELNILRQTNSPYIVKCHQIFTKPSG-----EVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +++ N I+ +FT +V I+ME MDA ++ + L + +
Sbjct: 72 RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI---QMELDHERM 128
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEK------------------MEHPCGYS 197
+ Q+L G+ ++HS I+HRD+KP+N+++ M P +
Sbjct: 129 SYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVT 188
Query: 198 CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQE 243
Y + E GY DIWS GV M E+ G F PG +
Sbjct: 189 RYYRAPEVILGM--GYKE-NVDIWSVGVIMGEMIKGGVLF--PGTD 229
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 85/203 (41%), Gaps = 36/203 (17%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ---ELNILRQTNSPYIVKCH 118
L+ LG G G V ++ + Y + + G+ + E ++ + +V+ +
Sbjct: 9 LKELGTGQFGVV---KYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLY 65
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ TK + I+ EYM G L Y++ R R + + + V + + Y+ S+ +HR
Sbjct: 66 GVCTKQR-PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 124
Query: 178 DIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFA-------------------- 217
D+ N L+N++ G + + G +R+ Y
Sbjct: 125 DLAARNCLVNDQ-----GVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 179
Query: 218 --ADIWSFGVTMMELY-MGYYPF 237
+DIW+FGV M E+Y +G P+
Sbjct: 180 SKSDIWAFGVLMWEIYSLGKMPY 202
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 89/203 (43%), Gaps = 36/203 (17%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ---ELNILRQTNSPYIVKCH 118
L+ LG G G V ++ + Y + + G+ + E ++ + +V+ +
Sbjct: 14 LKELGTGQFGVV---KYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLY 70
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ TK + I+ EYM G L Y++ R R + + + V + + Y+ S+ +HR
Sbjct: 71 GVCTKQR-PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 129
Query: 178 DIKPANVLINEKMEHPCGYSCLYESGEARH-------RKHGG-------------YNGFA 217
D+ N L+N++ G + + G +R+ G Y+ F+
Sbjct: 130 DLAARNCLVNDQ-----GVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFS 184
Query: 218 --ADIWSFGVTMMELY-MGYYPF 237
+DIW+FGV M E+Y +G P+
Sbjct: 185 SKSDIWAFGVLMWEIYSLGKMPY 207
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 85/203 (41%), Gaps = 36/203 (17%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQ---ELNILRQTNSPYIVKCH 118
L+ LG G G V ++ + Y + + G+ + E ++ + +V+ +
Sbjct: 14 LKELGTGQFGVV---KYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLY 70
Query: 119 QIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHR 177
+ TK + I+ EYM G L Y++ R R + + + V + + Y+ S+ +HR
Sbjct: 71 GVCTKQR-PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 129
Query: 178 DIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFA-------------------- 217
D+ N L+N++ G + + G +R+ Y
Sbjct: 130 DLAARNCLVNDQ-----GVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 184
Query: 218 --ADIWSFGVTMMELY-MGYYPF 237
+DIW+FGV M E+Y +G P+
Sbjct: 185 SKSDIWAFGVLMWEIYSLGKMPY 207
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 9/137 (6%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQC--DRGTPPNPQELNILRQTNSPYIVKCHQ 119
+Q LG+G V V YALK + C + +E ++ R N P I++
Sbjct: 34 IQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVA 93
Query: 120 IFTKPSG---EVSILMEYMDAGSL--EI-YVKSRGR-LSEDIICTISRQVLKGLFYMHSR 172
+ G E +L+ + G+L EI +K +G L+ED I + + +GL +H++
Sbjct: 94 YCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK 153
Query: 173 NIVHRDIKPANVLINEK 189
HRD+KP N+L+ ++
Sbjct: 154 GYAHRDLKPTNILLGDE 170
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 91/227 (40%), Gaps = 48/227 (21%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQC---DRGTPPNPQELNILRQTNSP 112
L+ E +Q LG+G G VF+ ++K YA+K ++ + +E+ L + P
Sbjct: 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHP 63
Query: 113 YIVKCHQIF-----------TKPSGEVSILMEYMDAGSLEIYVKSRGRLSE---DIICTI 158
IV+ + + P + I M+ +L+ ++ R + E + I
Sbjct: 64 GIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHI 123
Query: 159 SRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGE-------------- 204
Q+ + + ++HS+ ++HRD+KP+N+ G L + +
Sbjct: 124 FLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 205 -ARH-------------RKHGGYNGFAADIWSFGVTMMELYMGYYPF 237
ARH + HG DI+S G+ + EL YPF
Sbjct: 184 YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL---LYPF 227
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +++ N I+ +FT + +V ++ME MDA ++ + L + +
Sbjct: 72 RELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI---QMELDHERM 128
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLI 186
+ Q+L G+ ++HS I+HRD+KP+N+++
Sbjct: 129 SYLLYQMLXGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 24/162 (14%)
Query: 152 EDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEK-MEHPCGYSCLYE--------- 201
E +IC S QV KG+ ++ SR +HRD+ N+L++EK + C + +
Sbjct: 193 EHLIC-YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 251
Query: 202 SGEAR--------HRKHGGYNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLA 252
G+AR +D+WSFGV + E++ +G P+ + +F +
Sbjct: 252 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 311
Query: 253 ICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSH 294
P + E ++ + C G+PS+R T S+L+ H
Sbjct: 312 GTRMRAPDY--TTPEMYQTMLDC--WHGEPSQRPTFSELVEH 349
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 121/313 (38%), Gaps = 78/313 (24%)
Query: 60 EKLQVLGQG--NGGTVFKVRHKQT---LALYALKVMQCDRGTPPNPQ-ELNILRQTNSPY 113
E L V+G+G + TV R+K T + + + + C Q EL++ + N P
Sbjct: 12 ELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPN 71
Query: 114 IVKCHQIFTKPSGEVSILMEYMDAGSLE--IYVKSRGRLSEDIICTISRQVLKGLFYMHS 171
IV F E+ ++ +M GS + I ++E I I + VLK L Y+H
Sbjct: 72 IVPYRATFIA-DNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH 130
Query: 172 RNIVHRDIKPANVLIN----------------------EKMEHPC-GYSCL---YESGEA 205
VHR +K +++LI+ +++ H YS + S E
Sbjct: 131 MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEV 190
Query: 206 RHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLE------------------------PG 241
+ GY+ +DI+S G+T EL G+ PF + P
Sbjct: 191 LQQNLQGYDA-KSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPA 249
Query: 242 QEPDF----------LSLMLAICFREP-----PSLP--ECSSEKFRDFIRCCLQKGDPSK 284
+E LS L P PS P S F F+ CLQ+ +P
Sbjct: 250 EELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQR-NPDA 308
Query: 285 RWTASQLLSHPFL 297
R +AS LL+H F
Sbjct: 309 RPSASTLLNHSFF 321
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 24/162 (14%)
Query: 152 EDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEK-MEHPCGYSCLYE--------- 201
E +IC S QV KG+ ++ SR +HRD+ N+L++EK + C + +
Sbjct: 200 EHLIC-YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 258
Query: 202 SGEAR--------HRKHGGYNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLA 252
G+AR +D+WSFGV + E++ +G P+ + +F +
Sbjct: 259 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 318
Query: 253 ICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSH 294
P + E ++ + C G+PS+R T S+L+ H
Sbjct: 319 GTRMRAPDY--TTPEMYQTMLDC--WHGEPSQRPTFSELVEH 356
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 24/162 (14%)
Query: 152 EDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEK-MEHPCGYSCLYE--------- 201
E +IC S QV KG+ ++ SR +HRD+ N+L++EK + C + +
Sbjct: 191 EHLIC-YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 249
Query: 202 SGEAR--------HRKHGGYNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLA 252
G+AR +D+WSFGV + E++ +G P+ + +F +
Sbjct: 250 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 309
Query: 253 ICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSH 294
P + E ++ + C G+PS+R T S+L+ H
Sbjct: 310 GTRMRAPDY--TTPEMYQTMLDC--WHGEPSQRPTFSELVEH 347
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 24/162 (14%)
Query: 152 EDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEK-MEHPCGYSCLYE--------- 201
E +IC S QV KG+ ++ SR +HRD+ N+L++EK + C + +
Sbjct: 198 EHLIC-YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 256
Query: 202 SGEAR--------HRKHGGYNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLA 252
G+AR +D+WSFGV + E++ +G P+ + +F +
Sbjct: 257 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 316
Query: 253 ICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSH 294
P + E ++ + C G+PS+R T S+L+ H
Sbjct: 317 GTRMRAPDY--TTPEMYQTMLDC--WHGEPSQRPTFSELVEH 354
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 25/156 (16%)
Query: 157 TISRQVLKGLFYMHSRNIVHRDIKPANVLINE-KMEHPCGY---------SCLYESGEAR 206
+ S QV KG+ ++ S+N +HRD+ N+L+ ++ C + S G AR
Sbjct: 165 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 224
Query: 207 -----HRKHGGYN---GFAADIWSFGVTMMELY-MGYYPFLEPGQEPDF-LSLMLAICFR 256
+N F +D+WS+G+ + EL+ +G P+ PG D M+ FR
Sbjct: 225 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY--PGMPVDSKFYKMIKEGFR 282
Query: 257 EPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLL 292
PE + + D ++ C DP KR T Q++
Sbjct: 283 MLS--PEHAPAEMYDIMKTCWD-ADPLKRPTFKQIV 315
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 72 TVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131
V +H AL +K+++C R + P+ +++ Q ++ +I V ++
Sbjct: 63 VVKSAQHYTETALDEIKLLKCVRESDPSDPNKDMVVQ-----LIDDFKISGMNGIHVCMV 117
Query: 132 MEYMDAGSLEIYVKSRGR-LSEDIICTISRQVLKGLFYMHSR-NIVHRDIKPANVLI 186
E + L+ +KS + L + +I RQVL+GL Y+HS+ I+H DIKP N+L+
Sbjct: 118 FEVLGHHLLKWIIKSNYQGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILM 174
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 121/313 (38%), Gaps = 78/313 (24%)
Query: 60 EKLQVLGQG--NGGTVFKVRHKQT---LALYALKVMQCDRGTPPNPQ-ELNILRQTNSPY 113
E L V+G+G + TV R+K T + + + + C Q EL++ + N P
Sbjct: 28 ELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPN 87
Query: 114 IVKCHQIFTKPSGEVSILMEYMDAGSLE--IYVKSRGRLSEDIICTISRQVLKGLFYMHS 171
IV F E+ ++ +M GS + I ++E I I + VLK L Y+H
Sbjct: 88 IVPYRATFIA-DNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH 146
Query: 172 RNIVHRDIKPANVLIN----------------------EKMEHPC-GYSCL---YESGEA 205
VHR +K +++LI+ +++ H YS + S E
Sbjct: 147 MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEV 206
Query: 206 RHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLE------------------------PG 241
+ GY+ +DI+S G+T EL G+ PF + P
Sbjct: 207 LQQNLQGYDA-KSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPA 265
Query: 242 QEPDF----------LSLMLAICFREP-----PSLP--ECSSEKFRDFIRCCLQKGDPSK 284
+E LS L P PS P S F F+ CLQ+ +P
Sbjct: 266 EELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQR-NPDA 324
Query: 285 RWTASQLLSHPFL 297
R +AS LL+H F
Sbjct: 325 RPSASTLLNHSFF 337
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 69/158 (43%), Gaps = 33/158 (20%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ N I+ +FT + +V ++ME MDA ++ L + +
Sbjct: 72 RELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---HMELDHERM 128
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEK------------------MEHPCGYS 197
+ Q+L G+ ++HS I+HRD+KP+N+++ M P +
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVT 188
Query: 198 CLYESGEARHRKHGGYNGFAA--DIWSFGVTMMELYMG 233
Y + E G+AA DIWS G M EL G
Sbjct: 189 RYYRAPEVILGM-----GYAANVDIWSVGCIMGELVKG 221
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 25/156 (16%)
Query: 157 TISRQVLKGLFYMHSRNIVHRDIKPANVLINE-KMEHPCGY---------SCLYESGEAR 206
+ S QV KG+ ++ S+N +HRD+ N+L+ ++ C + S G AR
Sbjct: 167 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 226
Query: 207 -----HRKHGGYN---GFAADIWSFGVTMMELY-MGYYPFLEPGQEPDF-LSLMLAICFR 256
+N F +D+WS+G+ + EL+ +G P+ PG D M+ FR
Sbjct: 227 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY--PGMPVDSKFYKMIKEGFR 284
Query: 257 EPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLL 292
PE + + D ++ C DP KR T Q++
Sbjct: 285 MLS--PEHAPAEMYDIMKTCWD-ADPLKRPTFKQIV 317
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 84/208 (40%), Gaps = 21/208 (10%)
Query: 101 QELNILRQTNSPYIVKCHQIFT---KPS-GEVSILMEYMDAGSLEIYVKSRGRLSEDIIC 156
+E+ +L + P I+ IF +P+ ++ ++ E M ++ R +S I
Sbjct: 78 REIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQ 137
Query: 157 TISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHP-CGYSCLYESGEARHRKH----- 210
+L GL +H +VHRD+ P N+L+ + + C ++ E ++ H
Sbjct: 138 YFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR 197
Query: 211 --------GGYNGFA--ADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPS 260
+ GF D+WS G M E++ F ++ + +
Sbjct: 198 WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIED 257
Query: 261 LPECSSEKFRDFIRCCLQKGDPSKRWTA 288
+ SS RD++R L P++ WTA
Sbjct: 258 VVMFSSPSARDYLRNSLSNV-PARAWTA 284
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 87/219 (39%), Gaps = 21/219 (9%)
Query: 101 QELNILRQTNSPYIVKCHQIFT---KPS-GEVSILMEYMDAGSLEIYVKSRGRLSEDIIC 156
+E+ +L + P I+ IF +P+ ++ ++ E M ++ R +S I
Sbjct: 78 REIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQ 137
Query: 157 TISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHP-CGYSCLYESGEARHRKH----- 210
+L GL +H +VHRD+ P N+L+ + + C ++ E ++ H
Sbjct: 138 YFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR 197
Query: 211 --------GGYNGFA--ADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPS 260
+ GF D+WS G M E++ F ++ + +
Sbjct: 198 WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIED 257
Query: 261 LPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299
+ SS RD++R L P++ WTA + P D
Sbjct: 258 VVMFSSPSARDYLRNSLSNV-PARAWTAVVPTADPVALD 295
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 25/156 (16%)
Query: 157 TISRQVLKGLFYMHSRNIVHRDIKPANVLINE-KMEHPCGY---------SCLYESGEAR 206
+ S QV KG+ ++ S+N +HRD+ N+L+ ++ C + S G AR
Sbjct: 172 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 231
Query: 207 -----HRKHGGYN---GFAADIWSFGVTMMELY-MGYYPFLEPGQEPDF-LSLMLAICFR 256
+N F +D+WS+G+ + EL+ +G P+ PG D M+ FR
Sbjct: 232 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY--PGMPVDSKFYKMIKEGFR 289
Query: 257 EPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLL 292
PE + + D ++ C DP KR T Q++
Sbjct: 290 MLS--PEHAPAEMYDIMKTCWD-ADPLKRPTFKQIV 322
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 25/156 (16%)
Query: 157 TISRQVLKGLFYMHSRNIVHRDIKPANVLINE-KMEHPCGY---------SCLYESGEAR 206
+ S QV KG+ ++ S+N +HRD+ N+L+ ++ C + S G AR
Sbjct: 149 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 208
Query: 207 -----HRKHGGYN---GFAADIWSFGVTMMELY-MGYYPFLEPGQEPDF-LSLMLAICFR 256
+N F +D+WS+G+ + EL+ +G P+ PG D M+ FR
Sbjct: 209 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY--PGMPVDSKFYKMIKEGFR 266
Query: 257 EPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLL 292
PE + + D ++ C DP KR T Q++
Sbjct: 267 MLS--PEHAPAEMYDIMKTCWD-ADPLKRPTFKQIV 299
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 90/209 (43%), Gaps = 52/209 (24%)
Query: 125 SGEVSILMEYMDAGSLEIYVKSR----------------GRLSEDIICTISRQVLKGLFY 168
G + +++EY G+L Y+++R +LS + + + QV +G+ Y
Sbjct: 106 DGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEY 165
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKH-----GGYNG-------- 215
+ S+ +HRD+ NVL+ E + + G AR H NG
Sbjct: 166 LASKKCIHRDLAARNVLVTED-----NVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMA 220
Query: 216 ----------FAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFR-EPPSLPE 263
+D+WSFGV + E++ +G P+ PG + L +L R + PS
Sbjct: 221 PEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY--PGVPVEELFKLLKEGHRMDKPS--N 276
Query: 264 CSSEKFRDFIRCCLQKGDPSKRWTASQLL 292
C++E + +R C PS+R T QL+
Sbjct: 277 CTNELYM-MMRDCWH-AVPSQRPTFKQLV 303
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 33/214 (15%)
Query: 56 LSQLEKLQVLGQGNGGTV---FKVRHKQTLALYAL-KVMQCDRGTPPNPQELNILRQTNS 111
L + + L+ +G G G V + ++ +A+ L + Q +EL +++ N
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 112 PYIVKCHQIFTKPSG-----EVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGL 166
I+ +FT +V I+ME MDA ++ + L + + + Q+L G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGI 139
Query: 167 FYMHSRNIVHRDIKPANVLINEK---------MEHPCGYSCLYESGEARHRKHG------ 211
++HS I+HRD+KP+N+++ + G S + E E R +
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEP-EVVTRYYRAPEVIL 198
Query: 212 --GYNGFAADIWSFGVTMMELYMGYYPFLEPGQE 243
GY DIWS G M E M + L PG++
Sbjct: 199 GMGYKE-NVDIWSVGCIMGE--MVCHKILFPGRD 229
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
Query: 101 QELNILRQTNSPYIVKCHQIFTKPSG-----EVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +++ N I+ +FT +V I+ME MDA ++ + L + +
Sbjct: 72 RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI---QMELDHERM 128
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLI 186
+ Q+L G+ ++HS I+HRD+KP+N+++
Sbjct: 129 SYLLYQMLVGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +++ N I+ +FT + +V ++ME MDA ++ + L + +
Sbjct: 65 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI---QMELDHERM 121
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLI 186
+ Q+L G+ ++HS I+HRD+KP+N+++
Sbjct: 122 SYLLYQMLXGIKHLHSAGIIHRDLKPSNIVV 152
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +++ N I+ +FT + +V ++ME MDA ++ + L + +
Sbjct: 72 RELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI---QMELDHERM 128
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLI 186
+ Q+L G+ ++HS I+HRD+KP+N+++
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +++ N I+ +FT + +V ++ME MDA ++ + L + +
Sbjct: 72 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI---QMELDHERM 128
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLI 186
+ Q+L G+ ++HS I+HRD+KP+N+++
Sbjct: 129 SYLLYQMLXGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 35/163 (21%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +L+ N I+ +FT + +V ++ME MDA ++ L + +
Sbjct: 70 RELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---HMELDHERM 126
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHG---- 211
+ Q+L G+ ++HS I+HRD+KP+N+++ C L + G AR
Sbjct: 127 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD----CTLKIL-DFGLARTASTNFMMT 181
Query: 212 -----------------GYNGFAADIWSFGVTMMELYMGYYPF 237
GY DIWS G M EL G F
Sbjct: 182 PYVVTRYYRAPEVILGMGYKE-NVDIWSVGCIMGELVKGSVIF 223
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 18/109 (16%)
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGE-----ARHRKH 210
C I++ G+ ++H + +HRDIK AN+L++E L + E +
Sbjct: 127 CKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRI 186
Query: 211 GGYNGFAA------------DIWSFGVTMMELYMGYYPFLEPGQEPDFL 247
G + A DI+SFGV ++E+ G P ++ +EP L
Sbjct: 187 VGTTAYXAPEALRGEITPKSDIYSFGVVLLEIITG-LPAVDEHREPQLL 234
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 101 QELNILRQTNSPYIVKCHQIFTKPSG-----EVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +++ N I+ +FT +V I+ME MDA ++ + L + +
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERM 128
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEK---------MEHPCGYSCLYESGEAR 206
+ Q+L G+ ++HS I+HRD+KP+N+++ + G S + + E
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-TPEVV 187
Query: 207 HRKHG--------GYNGFAADIWSFGVTMMELYMGYYPFLEPGQE 243
R + GY DIWS G M E+ G F PG +
Sbjct: 188 TRYYRAPEVILGMGYKE-NVDIWSVGCIMGEMIKGGVLF--PGTD 229
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 91/222 (40%), Gaps = 42/222 (18%)
Query: 57 SQLEKLQVLGQGNGGTVFK-VRHKQTLALYALKVMQ-CDRGTPPNPQELNILRQTNSP-- 112
++ E + LG+G G V + + HK A+K+++ DR E+ +L N+
Sbjct: 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDP 73
Query: 113 -YIVKCHQI--FTKPSGEVSILMEYMDAGSLEIYVKSRGRL--SEDIICTISRQVLKGLF 167
+C Q+ + + G + I+ E + + + ++K G L D I ++ Q+ K +
Sbjct: 74 NSTFRCVQMLEWFEHHGHICIVFELLGLSTYD-FIKENGFLPFRLDHIRKMAYQICKSVN 132
Query: 168 YMHSRNIVHRDIKPANVLI---------NEKMEH----------------PCGYSCLYES 202
++HS + H D+KP N+L N K++ Y + S
Sbjct: 133 FLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHS 192
Query: 203 GEARHRKHGGYNGFAA-------DIWSFGVTMMELYMGYYPF 237
R + A D+WS G ++E Y+G+ F
Sbjct: 193 TLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF 234
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 91/222 (40%), Gaps = 42/222 (18%)
Query: 57 SQLEKLQVLGQGNGGTVFK-VRHKQTLALYALKVMQ-CDRGTPPNPQELNILRQTNSP-- 112
++ E + LG+G G V + + HK A+K+++ DR E+ +L N+
Sbjct: 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDP 73
Query: 113 -YIVKCHQI--FTKPSGEVSILMEYMDAGSLEIYVKSRGRL--SEDIICTISRQVLKGLF 167
+C Q+ + + G + I+ E + + + ++K G L D I ++ Q+ K +
Sbjct: 74 NSTFRCVQMLEWFEHHGHICIVFELLGLSTYD-FIKENGFLPFRLDHIRKMAYQICKSVN 132
Query: 168 YMHSRNIVHRDIKPANVLI---------NEKMEH----------------PCGYSCLYES 202
++HS + H D+KP N+L N K++ Y + S
Sbjct: 133 FLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHS 192
Query: 203 GEARHRKHGGYNGFAA-------DIWSFGVTMMELYMGYYPF 237
R + A D+WS G ++E Y+G+ F
Sbjct: 193 TLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF 234
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 65/148 (43%), Gaps = 23/148 (15%)
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR--LSEDIICTISRQV 162
I++ + P ++ I + G +++ YM G L ++++ +D+I QV
Sbjct: 85 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-GFGLQV 143
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKM-----EHPCGYSCLYESGEARHRKHGG----- 212
KG+ ++ S+ VHRD+ N +++EK + L + ++ H K G
Sbjct: 144 AKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVK 203
Query: 213 --------YNGFA--ADIWSFGVTMMEL 230
F +D+WSFGV + EL
Sbjct: 204 WMALESLQTQKFTTKSDVWSFGVLLWEL 231
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +++ N I+ +FT + +V ++ME MDA ++ + L + +
Sbjct: 72 RELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERM 128
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLI 186
+ Q+L G+ ++HS I+HRD+KP+N+++
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 33/214 (15%)
Query: 56 LSQLEKLQVLGQGNGGTV---FKVRHKQTLALYAL-KVMQCDRGTPPNPQELNILRQTNS 111
L + + L+ +G G G V + ++ +A+ L + Q +EL +++ N
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 112 PYIVKCHQIFTKPSG-----EVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGL 166
I+ +FT +V I+ME MDA ++ + L + + + Q+L G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGI 139
Query: 167 FYMHSRNIVHRDIKPANVLINEK---------MEHPCGYSCLYESGEARHRKHG------ 211
++HS I+HRD+KP+N+++ + G S + E E R +
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEP-EVVTRYYRAPEVIL 198
Query: 212 --GYNGFAADIWSFGVTMMELYMGYYPFLEPGQE 243
GY D+WS G M E M + L PG++
Sbjct: 199 GMGYKE-NVDLWSVGCIMGE--MVCHKILFPGRD 229
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
Query: 101 QELNILRQTNSPYIVKCHQIFTKPSG-----EVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +++ N I+ +FT +V I+ME MDA ++ + L + +
Sbjct: 72 RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI---QMELDHERM 128
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLI 186
+ Q+L G+ ++HS I+HRD+KP+N+++
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 23/148 (15%)
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR--LSEDIICTISRQV 162
I++ + P ++ I + G +++ YM G L ++++ +D+I QV
Sbjct: 76 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-GFGLQV 134
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG-------------YSCLYESGEARHRK 209
KG+ Y+ S+ VHRD+ N +++EK YS ++G K
Sbjct: 135 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 194
Query: 210 HGGYNGF-------AADIWSFGVTMMEL 230
+D+WSFGV + EL
Sbjct: 195 WMALESLQTQKFTTKSDVWSFGVLLWEL 222
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 56 LSQLEKLQVLGQGNGGTV---FKVRHKQTLALYAL-KVMQCDRGTPPNPQELNILRQTNS 111
L + + L+ +G G G V + ++ +A+ L + Q +EL +++ N
Sbjct: 28 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 87
Query: 112 PYIVKCHQIFTKPSG-----EVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGL 166
I+ +FT +V I+ME MDA ++ + L + + + Q+L G+
Sbjct: 88 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGI 144
Query: 167 FYMHSRNIVHRDIKPANVLI 186
++HS I+HRD+KP+N+++
Sbjct: 145 KHLHSAGIIHRDLKPSNIVV 164
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 56 LSQLEKLQVLGQGNGGTV---FKVRHKQTLALYAL-KVMQCDRGTPPNPQELNILRQTNS 111
L + + L+ +G G G V + ++ +A+ L + Q +EL +++ N
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 112 PYIVKCHQIFTKPSG-----EVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGL 166
I+ +FT +V I+ME MDA ++ + L + + + Q+L G+
Sbjct: 77 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGI 133
Query: 167 FYMHSRNIVHRDIKPANVLI 186
++HS I+HRD+KP+N+++
Sbjct: 134 KHLHSAGIIHRDLKPSNIVV 153
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 23/148 (15%)
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR--LSEDIICTISRQV 162
I++ + P ++ I + G +++ YM G L ++++ +D+I QV
Sbjct: 102 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-GFGLQV 160
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG-------------YSCLYESGEARHRK 209
KG+ Y+ S+ VHRD+ N +++EK YS ++G K
Sbjct: 161 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 220
Query: 210 HGGYNGF-------AADIWSFGVTMMEL 230
+D+WSFGV + EL
Sbjct: 221 WMALESLQTQKFTTKSDVWSFGVLLWEL 248
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 23/148 (15%)
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR--LSEDIICTISRQV 162
I++ + P ++ I + G +++ YM G L ++++ +D+I QV
Sbjct: 84 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-GFGLQV 142
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG-------------YSCLYESGEARHRK 209
KG+ Y+ S+ VHRD+ N +++EK YS ++G K
Sbjct: 143 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 202
Query: 210 HGGYNGF-------AADIWSFGVTMMEL 230
+D+WSFGV + EL
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWEL 230
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 23/148 (15%)
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR--LSEDIICTISRQV 162
I++ + P ++ I + G +++ YM G L ++++ +D+I QV
Sbjct: 103 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-GFGLQV 161
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG-------------YSCLYESGEARHRK 209
KG+ Y+ S+ VHRD+ N +++EK YS ++G K
Sbjct: 162 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 221
Query: 210 HGGYNGF-------AADIWSFGVTMMEL 230
+D+WSFGV + EL
Sbjct: 222 WMALESLQTQKFTTKSDVWSFGVLLWEL 249
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
Query: 101 QELNILRQTNSPYIVKCHQIFTKPSG-----EVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +++ N I+ +FT +V I+ME MDA ++ + L + +
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERM 128
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLI 186
+ Q+L G+ ++HS I+HRD+KP+N+++
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
Query: 101 QELNILRQTNSPYIVKCHQIFTKPSG-----EVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +++ N I+ +FT +V I+ME MDA ++ + L + +
Sbjct: 74 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERM 130
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLI 186
+ Q+L G+ ++HS I+HRD+KP+N+++
Sbjct: 131 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 161
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
Query: 101 QELNILRQTNSPYIVKCHQIFTKPSG-----EVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +++ N I+ +FT +V I+ME MDA ++ + L + +
Sbjct: 73 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERM 129
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLI 186
+ Q+L G+ ++HS I+HRD+KP+N+++
Sbjct: 130 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 160
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 23/148 (15%)
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR--LSEDIICTISRQV 162
I++ + P ++ I + G +++ YM G L ++++ +D+I QV
Sbjct: 81 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-GFGLQV 139
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG-------------YSCLYESGEARHRK 209
KG+ Y+ S+ VHRD+ N +++EK YS ++G K
Sbjct: 140 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 199
Query: 210 HGGYNGF-------AADIWSFGVTMMEL 230
+D+WSFGV + EL
Sbjct: 200 WMALESLQTQKFTTKSDVWSFGVLLWEL 227
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 23/148 (15%)
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR--LSEDIICTISRQV 162
I++ + P ++ I + G +++ YM G L ++++ +D+I QV
Sbjct: 82 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-GFGLQV 140
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG-------------YSCLYESGEARHRK 209
KG+ Y+ S+ VHRD+ N +++EK YS ++G K
Sbjct: 141 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 200
Query: 210 HGGYNGF-------AADIWSFGVTMMEL 230
+D+WSFGV + EL
Sbjct: 201 WMALESLQTQKFTTKSDVWSFGVLLWEL 228
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
Query: 101 QELNILRQTNSPYIVKCHQIFTKPSG-----EVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +++ N I+ +FT +V I+ME MDA ++ + L + +
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERM 128
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLI 186
+ Q+L G+ ++HS I+HRD+KP+N+++
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 106/259 (40%), Gaps = 41/259 (15%)
Query: 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQIF 121
L+ LG G G V + K + + + QE + + + P +VK + +
Sbjct: 13 LKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 122 TKPSGEVSILMEYMDAGSLEIYVKSRGR-LSEDIICTISRQVLKGLFYMHSRNIVHRDIK 180
+K + I+ EY+ G L Y++S G+ L + + V +G+ ++ S +HRD+
Sbjct: 73 SKEY-PIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLA 131
Query: 181 PANVLINEKM------------------------EHPCGYSCLYESGEARHRKHGGYNGF 216
N L++ + + P +S + E H + Y+
Sbjct: 132 ARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWS----APEVFH--YFKYSS- 184
Query: 217 AADIWSFGVTMMELY-MGYYPF-LEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIR 274
+D+W+FG+ M E++ +G P+ L E ++L + P +S+ +
Sbjct: 185 KSDVWAFGILMWEVFSLGKMPYDLYTNSE-----VVLKVSQGHRLYRPHLASDTIYQIMY 239
Query: 275 CCLQKGDPSKRWTASQLLS 293
C + P KR T QLLS
Sbjct: 240 SCWHEL-PEKRPTFQQLLS 257
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 23/148 (15%)
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR--LSEDIICTISRQV 162
I++ + P ++ I + G +++ YM G L ++++ +D+I QV
Sbjct: 79 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-GFGLQV 137
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG-------------YSCLYESGEARHRK 209
KG+ Y+ S+ VHRD+ N +++EK YS ++G K
Sbjct: 138 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 197
Query: 210 HGGYNGF-------AADIWSFGVTMMEL 230
+D+WSFGV + EL
Sbjct: 198 WMALESLQTQKFTTKSDVWSFGVLLWEL 225
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 23/148 (15%)
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR--LSEDIICTISRQV 162
I++ + P ++ I + G +++ YM G L ++++ +D+I QV
Sbjct: 83 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-GFGLQV 141
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG-------------YSCLYESGEARHRK 209
KG+ Y+ S+ VHRD+ N +++EK YS ++G K
Sbjct: 142 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 201
Query: 210 HGGYNGF-------AADIWSFGVTMMEL 230
+D+WSFGV + EL
Sbjct: 202 WMALESLQTQKFTTKSDVWSFGVLLWEL 229
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 23/148 (15%)
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR--LSEDIICTISRQV 162
I++ + P ++ I + G +++ YM G L ++++ +D+I QV
Sbjct: 84 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-GFGLQV 142
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG-------------YSCLYESGEARHRK 209
KG+ Y+ S+ VHRD+ N +++EK YS ++G K
Sbjct: 143 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 202
Query: 210 HGGYNGF-------AADIWSFGVTMMEL 230
+D+WSFGV + EL
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWEL 230
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
Query: 101 QELNILRQTNSPYIVKCHQIFTKPSG-----EVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +++ N I+ +FT +V I+ME MDA ++ + L + +
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI---QMELDHERM 128
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLI 186
+ Q+L G+ ++HS I+HRD+KP+N+++
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +++ N I+ +FT + +V ++ME MDA ++ + L + +
Sbjct: 110 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERM 166
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLI 186
+ Q+L G+ ++HS I+HRD+KP+N+++
Sbjct: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 197
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
Query: 101 QELNILRQTNSPYIVKCHQIFTKPSG-----EVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +++ N I+ +FT +V I+ME MDA ++ + L + +
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI---QMELDHERM 128
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLI 186
+ Q+L G+ ++HS I+HRD+KP+N+++
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +++ N I+ +FT + +V ++ME MDA ++ + L + +
Sbjct: 110 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERM 166
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLI 186
+ Q+L G+ ++HS I+HRD+KP+N+++
Sbjct: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 197
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 31/166 (18%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +++ N I+ +FT + +V ++ME MDA ++ + L + +
Sbjct: 73 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERM 129
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLINEK------------------MEHPCGYS 197
+ Q+L G+ ++HS I+HRD+KP+N+++ M P +
Sbjct: 130 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVT 189
Query: 198 CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQE 243
Y + E GY DIWS G M E M + L PG++
Sbjct: 190 RYYRAPEV--ILGMGYKE-NVDIWSVGCIMGE--MVRHKILFPGRD 230
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 104/257 (40%), Gaps = 48/257 (18%)
Query: 62 LQVLGQGNGGTVFKVRHKQTL---ALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCH 118
L+ LGQG+ G V++ + + A + V + + + L + + CH
Sbjct: 22 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR-ERIEFLNEASVMKGFTCH 80
Query: 119 QIFTKPSGEVS------ILMEYMDAGSLEIYVKSRGRLSEDI----------ICTISRQV 162
+ + G VS ++ME M G L+ Y++S +E+ + ++ ++
Sbjct: 81 HV-VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG----YSCLYESGEARHRKHG------- 211
G+ Y++++ VHRD+ N ++ G +YE+ A +RK G
Sbjct: 140 ADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYET--AYYRKGGKGLLPVR 197
Query: 212 ---------GYNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSL 261
G ++D+WSFGV + E+ + P+ E +M +P +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 257
Query: 262 PECSSEKFRDFIRCCLQ 278
P E+ D +R C Q
Sbjct: 258 P----ERVTDLMRMCWQ 270
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 63/148 (42%), Gaps = 23/148 (15%)
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR--LSEDIICTISRQV 162
I++ + P ++ I + G +++ YM G L ++++ +D+I QV
Sbjct: 83 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-GFGLQV 141
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKM-----EHPCGYSCLYESGEARHRKHGG----- 212
KG+ Y+ S+ VHRD+ N +++EK + + + H K G
Sbjct: 142 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVK 201
Query: 213 --------YNGFA--ADIWSFGVTMMEL 230
F +D+WSFGV + EL
Sbjct: 202 WMALESLQTQKFTTKSDVWSFGVLLWEL 229
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 92/209 (44%), Gaps = 52/209 (24%)
Query: 125 SGEVSILMEYMDAGSLEIYVKSR-----------GRLSED-----IICTISRQVLKGLFY 168
G + +++EY G+L Y+++R R+ E+ + + + Q+ +G+ Y
Sbjct: 159 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEY 218
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGY-----NG-------- 215
+ S+ +HRD+ NVL+ E + + G AR + Y NG
Sbjct: 219 LASQKCIHRDLAARNVLVTEN-----NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMA 273
Query: 216 ----------FAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFR-EPPSLPE 263
+D+WSFGV M E++ +G P+ PG + L +L R + P+
Sbjct: 274 PEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY--PGIPVEELFKLLKEGHRMDKPA--N 329
Query: 264 CSSEKFRDFIRCCLQKGDPSKRWTASQLL 292
C++E + +R C PS+R T QL+
Sbjct: 330 CTNELYM-MMRDCWH-AVPSQRPTFKQLV 356
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +++ N I+ +FT + +V ++ME MDA ++ + L + +
Sbjct: 66 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERM 122
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLI 186
+ Q+L G+ ++HS I+HRD+KP+N+++
Sbjct: 123 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 153
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +++ N I+ +FT + +V ++ME MDA ++ + L + +
Sbjct: 65 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERM 121
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLI 186
+ Q+L G+ ++HS I+HRD+KP+N+++
Sbjct: 122 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 152
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +++ N I+ +FT + +V ++ME MDA ++ + L + +
Sbjct: 66 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERM 122
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLI 186
+ Q+L G+ ++HS I+HRD+KP+N+++
Sbjct: 123 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 153
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +++ N I+ +FT + +V ++ME MDA ++ + L + +
Sbjct: 72 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERM 128
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLI 186
+ Q+L G+ ++HS I+HRD+KP+N+++
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +++ N I+ +FT + +V ++ME MDA ++ + L + +
Sbjct: 72 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERM 128
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLI 186
+ Q+L G+ ++HS I+HRD+KP+N+++
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +++ N I+ +FT + +V ++ME MDA ++ + L + +
Sbjct: 71 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERM 127
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLI 186
+ Q+L G+ ++HS I+HRD+KP+N+++
Sbjct: 128 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 158
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 101 QELNILRQTNSPYIVKCHQIFT-----KPSGEVSILMEYMDAGSLEIYVKSRGRLSEDII 155
+EL +++ N I+ +FT + +V ++ME MDA ++ + L + +
Sbjct: 73 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERM 129
Query: 156 CTISRQVLKGLFYMHSRNIVHRDIKPANVLI 186
+ Q+L G+ ++HS I+HRD+KP+N+++
Sbjct: 130 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 160
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 112/272 (41%), Gaps = 55/272 (20%)
Query: 63 QVLGQGNGGTVFKVRHKQ---TLALYALKVMQCDRGTPPNPQEL----NILRQTNSPYIV 115
++LG+G G+V + KQ T A+K M+ D + +E ++ + P ++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 116 K----CHQIFTKPSGEVSILMEYMDAGSLEIYV-KSR-----GRLSEDIICTISRQVLKG 165
+ C ++ ++ + +++ +M G L Y+ SR + + + G
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 166 LFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGY--NGFAA----- 218
+ Y+ +RN +HRD+ N ++ + M C+ + G ++ G Y G A
Sbjct: 160 MEYLSNRNFLHRDLAARNCMLRDDMT-----VCVADFGLSKKIYSGDYYRQGRIAKMPVK 214
Query: 219 ----------------DIWSFGVTMMELY---MGYYPFLEPGQEPDFLSLMLAICFREPP 259
D+W+FGVTM E+ M YP ++ + D+ L+ ++P
Sbjct: 215 WIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDY--LLHGHRLKQP- 271
Query: 260 SLPECSSEKFRDFIRCCLQKGDPSKRWTASQL 291
+C E + C + DP R T S L
Sbjct: 272 --EDCLDELYEIMYSCW--RTDPLDRPTFSVL 299
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 52/210 (24%)
Query: 125 SGEVSILMEYMDAGSLEIYVKSR-----------GRLSED-----IICTISRQVLKGLFY 168
G + +++EY G+L Y+++R R+ E+ + + + Q+ +G+ Y
Sbjct: 100 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEY 159
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGY-----NG-------- 215
+ S+ +HRD+ NVL+ E + + G AR + Y NG
Sbjct: 160 LASQKCIHRDLTARNVLVTEN-----NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMA 214
Query: 216 ----------FAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFR-EPPSLPE 263
+D+WSFGV M E++ +G P+ PG + L +L R + P+
Sbjct: 215 PEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY--PGIPVEELFKLLKEGHRMDKPA--N 270
Query: 264 CSSEKFRDFIRCCLQKGDPSKRWTASQLLS 293
C++E + +R C PS+R T QL+
Sbjct: 271 CTNELYM-MMRDCWH-AVPSQRPTFKQLVE 298
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 52/210 (24%)
Query: 125 SGEVSILMEYMDAGSLEIYVKSR-----------GRLSED-----IICTISRQVLKGLFY 168
G + +++EY G+L Y+++R R+ E+ + + + Q+ +G+ Y
Sbjct: 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEY 172
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGY-----NG-------- 215
+ S+ +HRD+ NVL+ E + + G AR + Y NG
Sbjct: 173 LASQKCIHRDLAARNVLVTEN-----NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMA 227
Query: 216 ----------FAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFR-EPPSLPE 263
+D+WSFGV M E++ +G P+ PG + L +L R + P+
Sbjct: 228 PEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY--PGIPVEELFKLLKEGHRMDKPA--N 283
Query: 264 CSSEKFRDFIRCCLQKGDPSKRWTASQLLS 293
C++E + +R C PS+R T QL+
Sbjct: 284 CTNELYM-MMRDCWH-AVPSQRPTFKQLVE 311
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 84/207 (40%), Gaps = 39/207 (18%)
Query: 63 QVLGQGNGGTVFK---VRHKQTLALYALKVMQCDRGTPPNPQ----ELNILRQTNSPYIV 115
++LG+G G V++ HK A+K + D T N + E I++ + P+IV
Sbjct: 30 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKD-CTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 116 KCHQIFTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQVLKGLFYMHSRNI 174
K I + I+ME G L Y+ +++ L + S Q+ K + Y+ S N
Sbjct: 89 KLIGIIEEEP--TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINC 146
Query: 175 VHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYN-------------------- 214
VHRDI N+L+ G + G +R+ + Y
Sbjct: 147 VHRDIAVRNILVASPECVKLG-----DFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR 201
Query: 215 --GFAADIWSFGVTMME-LYMGYYPFL 238
A+D+W F V M E L G PF
Sbjct: 202 RFTTASDVWMFAVCMWEILSFGKQPFF 228
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 52/210 (24%)
Query: 125 SGEVSILMEYMDAGSLEIYVKSR-----------GRLSED-----IICTISRQVLKGLFY 168
G + +++EY G+L Y+++R R+ E+ + + + Q+ +G+ Y
Sbjct: 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEY 172
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGY-----NG-------- 215
+ S+ +HRD+ NVL+ E + + G AR + Y NG
Sbjct: 173 LASQKCIHRDLAARNVLVTEN-----NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMA 227
Query: 216 ----------FAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFR-EPPSLPE 263
+D+WSFGV M E++ +G P+ PG + L +L R + P+
Sbjct: 228 PEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY--PGIPVEELFKLLKEGHRMDKPA--N 283
Query: 264 CSSEKFRDFIRCCLQKGDPSKRWTASQLLS 293
C++E + +R C PS+R T QL+
Sbjct: 284 CTNELYM-MMRDCWH-AVPSQRPTFKQLVE 311
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 52/210 (24%)
Query: 125 SGEVSILMEYMDAGSLEIYVKSR-----------GRLSED-----IICTISRQVLKGLFY 168
G + +++EY G+L Y+++R R+ E+ + + + Q+ +G+ Y
Sbjct: 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEY 172
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGY-----NG-------- 215
+ S+ +HRD+ NVL+ E + + G AR + Y NG
Sbjct: 173 LASQKCIHRDLAARNVLVTEN-----NVMKIADFGLARDINNIDYYKNTTNGRLPVKWMA 227
Query: 216 ----------FAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFR-EPPSLPE 263
+D+WSFGV M E++ +G P+ PG + L +L R + P+
Sbjct: 228 PEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY--PGIPVEELFKLLKEGHRMDKPA--N 283
Query: 264 CSSEKFRDFIRCCLQKGDPSKRWTASQLLS 293
C++E + +R C PS+R T QL+
Sbjct: 284 CTNELYM-MMRDCWH-AVPSQRPTFKQLVE 311
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 52/210 (24%)
Query: 125 SGEVSILMEYMDAGSLEIYVKSR-----------GRLSED-----IICTISRQVLKGLFY 168
G + +++EY G+L Y+++R R+ E+ + + + Q+ +G+ Y
Sbjct: 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEY 172
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGY-----NG-------- 215
+ S+ +HRD+ NVL+ E + + G AR + Y NG
Sbjct: 173 LASQKCIHRDLAARNVLVTEN-----NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMA 227
Query: 216 ----------FAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFR-EPPSLPE 263
+D+WSFGV M E++ +G P+ PG + L +L R + P+
Sbjct: 228 PEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY--PGIPVEELFKLLKEGHRMDKPA--N 283
Query: 264 CSSEKFRDFIRCCLQKGDPSKRWTASQLLS 293
C++E + +R C PS+R T QL+
Sbjct: 284 CTNELYM-MMRDCWH-AVPSQRPTFKQLVE 311
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 84/207 (40%), Gaps = 39/207 (18%)
Query: 63 QVLGQGNGGTVFK---VRHKQTLALYALKVMQCDRGTPPNPQ----ELNILRQTNSPYIV 115
++LG+G G V++ HK A+K + D T N + E I++ + P+IV
Sbjct: 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKD-CTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 116 KCHQIFTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQVLKGLFYMHSRNI 174
K I + I+ME G L Y+ +++ L + S Q+ K + Y+ S N
Sbjct: 77 KLIGIIEEEP--TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINC 134
Query: 175 VHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYN-------------------- 214
VHRDI N+L+ G + G +R+ + Y
Sbjct: 135 VHRDIAVRNILVASPECVKLG-----DFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR 189
Query: 215 --GFAADIWSFGVTMME-LYMGYYPFL 238
A+D+W F V M E L G PF
Sbjct: 190 RFTTASDVWMFAVCMWEILSFGKQPFF 216
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 111/268 (41%), Gaps = 61/268 (22%)
Query: 55 GLSQLEKLQVLGQGNGGTV----FKVRHKQTLALYALKVMQCDRGTPPNP-----QELNI 105
G L L+ LG G+ G V + +T+++ A+K ++ D + P +E+N
Sbjct: 16 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 106 LRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSL-EIYVKSRGRLSEDIICTISRQVLK 164
+ + +++ + + P + ++ E GSL + K +G + + QV +
Sbjct: 75 MHSLDHRNLIRLYGVVLTPP--MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAE 132
Query: 165 GLFYMHSRNIVHRDIKPANVLINEK-----------------------MEH---PCGYSC 198
G+ Y+ S+ +HRD+ N+L+ + EH P + C
Sbjct: 133 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW-C 191
Query: 199 LYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSL----MLAIC 254
ES + R H A+D W FGVT+ E++ GQEP ++ L +L
Sbjct: 192 APESLKTRTFSH------ASDTWMFGVTLWEMFTY-------GQEP-WIGLNGSQILHKI 237
Query: 255 FREPPSLP---ECSSEKFRDFIRCCLQK 279
+E LP +C + + ++C K
Sbjct: 238 DKEGERLPRPEDCPQDIYNVMVQCWAHK 265
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 52/210 (24%)
Query: 125 SGEVSILMEYMDAGSLEIYVKSR-----------GRLSED-----IICTISRQVLKGLFY 168
G + +++EY G+L Y+++R R+ E+ + + + Q+ +G+ Y
Sbjct: 105 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEY 164
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGY-----NG-------- 215
+ S+ +HRD+ NVL+ E + + G AR + Y NG
Sbjct: 165 LASQKCIHRDLAARNVLVTEN-----NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMA 219
Query: 216 ----------FAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFR-EPPSLPE 263
+D+WSFGV M E++ +G P+ PG + L +L R + P+
Sbjct: 220 PEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY--PGIPVEELFKLLKEGHRMDKPA--N 275
Query: 264 CSSEKFRDFIRCCLQKGDPSKRWTASQLLS 293
C++E + +R C PS+R T QL+
Sbjct: 276 CTNELYM-MMRDCWH-AVPSQRPTFKQLVE 303
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 84/207 (40%), Gaps = 39/207 (18%)
Query: 63 QVLGQGNGGTVFK---VRHKQTLALYALKVMQCDRGTPPNPQ----ELNILRQTNSPYIV 115
++LG+G G V++ HK A+K + D T N + E I++ + P+IV
Sbjct: 14 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKD-CTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 116 KCHQIFTKPSGEVSILMEYMDAGSLEIYV-KSRGRLSEDIICTISRQVLKGLFYMHSRNI 174
K I + I+ME G L Y+ +++ L + S Q+ K + Y+ S N
Sbjct: 73 KLIGIIEEEP--TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINC 130
Query: 175 VHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYN-------------------- 214
VHRDI N+L+ G + G +R+ + Y
Sbjct: 131 VHRDIAVRNILVASPECVKLG-----DFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR 185
Query: 215 --GFAADIWSFGVTMME-LYMGYYPFL 238
A+D+W F V M E L G PF
Sbjct: 186 RFTTASDVWMFAVCMWEILSFGKQPFF 212
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 83/200 (41%), Gaps = 33/200 (16%)
Query: 57 SQLEKLQVLGQGNGGTVF--KVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYI 114
S+L +Q +G G G V +K +A+ +K + +E ++ + + P +
Sbjct: 27 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIK--EGSMSEDDFIEEAEVMMKLSHPKL 84
Query: 115 VKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRN 173
V+ + + + + + ++ E+M+ G L Y+++ RG + + + + V +G+ Y+
Sbjct: 85 VQLYGVCLEQA-PICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 143
Query: 174 IVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFA---------------- 217
++HRD+ N L+ E + G R Y
Sbjct: 144 VIHRDLAARNCLVGENQVIKVS-----DFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF 198
Query: 218 ------ADIWSFGVTMMELY 231
+D+WSFGV M E++
Sbjct: 199 SRYSSKSDVWSFGVLMWEVF 218
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 52/210 (24%)
Query: 125 SGEVSILMEYMDAGSLEIYVKSR-----------GRLSED-----IICTISRQVLKGLFY 168
G + +++EY G+L Y+++R R+ E+ + + + Q+ +G+ Y
Sbjct: 102 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEY 161
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGY-----NG-------- 215
+ S+ +HRD+ NVL+ E + + G AR + Y NG
Sbjct: 162 LASQKCIHRDLAARNVLVTEN-----NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMA 216
Query: 216 ----------FAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFR-EPPSLPE 263
+D+WSFGV M E++ +G P+ PG + L +L R + P+
Sbjct: 217 PEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY--PGIPVEELFKLLKEGHRMDKPA--N 272
Query: 264 CSSEKFRDFIRCCLQKGDPSKRWTASQLLS 293
C++E + +R C PS+R T QL+
Sbjct: 273 CTNELYM-MMRDCWH-AVPSQRPTFKQLVE 300
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 111/268 (41%), Gaps = 61/268 (22%)
Query: 55 GLSQLEKLQVLGQGNGGTV----FKVRHKQTLALYALKVMQCDRGTPPNP-----QELNI 105
G L L+ LG G+ G V + +T+++ A+K ++ D + P +E+N
Sbjct: 16 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 106 LRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSL-EIYVKSRGRLSEDIICTISRQVLK 164
+ + +++ + + P + ++ E GSL + K +G + + QV +
Sbjct: 75 MHSLDHRNLIRLYGVVLTPP--MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAE 132
Query: 165 GLFYMHSRNIVHRDIKPANVLINEK-----------------------MEH---PCGYSC 198
G+ Y+ S+ +HRD+ N+L+ + EH P + C
Sbjct: 133 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAW-C 191
Query: 199 LYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSL----MLAIC 254
ES + R H A+D W FGVT+ E++ GQEP ++ L +L
Sbjct: 192 APESLKTRTFSH------ASDTWMFGVTLWEMFTY-------GQEP-WIGLNGSQILHKI 237
Query: 255 FREPPSLP---ECSSEKFRDFIRCCLQK 279
+E LP +C + + ++C K
Sbjct: 238 DKEGERLPRPEDCPQDIYNVMVQCWAHK 265
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 52/210 (24%)
Query: 125 SGEVSILMEYMDAGSLEIYVKSR-----------GRLSED-----IICTISRQVLKGLFY 168
G + +++EY G+L Y+++R R+ E+ + + + Q+ +G+ Y
Sbjct: 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEY 172
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGY-----NG-------- 215
+ S+ +HRD+ NVL+ E + + G AR + Y NG
Sbjct: 173 LASQKCIHRDLAARNVLVTEN-----NVMRIADFGLARDINNIDYYKKTTNGRLPVKWMA 227
Query: 216 ----------FAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFR-EPPSLPE 263
+D+WSFGV M E++ +G P+ PG + L +L R + P+
Sbjct: 228 PEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY--PGIPVEELFKLLKEGHRMDKPA--N 283
Query: 264 CSSEKFRDFIRCCLQKGDPSKRWTASQLLS 293
C++E + +R C PS+R T QL+
Sbjct: 284 CTNELYM-MMRDCWH-AVPSQRPTFKQLVE 311
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 111/268 (41%), Gaps = 61/268 (22%)
Query: 55 GLSQLEKLQVLGQGNGGTV----FKVRHKQTLALYALKVMQCDRGTPPNP-----QELNI 105
G L L+ LG G+ G V + +T+++ A+K ++ D + P +E+N
Sbjct: 10 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 106 LRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSL-EIYVKSRGRLSEDIICTISRQVLK 164
+ + +++ + + P + ++ E GSL + K +G + + QV +
Sbjct: 69 MHSLDHRNLIRLYGVVLTPP--MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAE 126
Query: 165 GLFYMHSRNIVHRDIKPANVLINEK-----------------------MEH---PCGYSC 198
G+ Y+ S+ +HRD+ N+L+ + EH P + C
Sbjct: 127 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW-C 185
Query: 199 LYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSL----MLAIC 254
ES + R H A+D W FGVT+ E++ GQEP ++ L +L
Sbjct: 186 APESLKTRTFSH------ASDTWMFGVTLWEMFTY-------GQEP-WIGLNGSQILHKI 231
Query: 255 FREPPSLP---ECSSEKFRDFIRCCLQK 279
+E LP +C + + ++C K
Sbjct: 232 DKEGERLPRPEDCPQDIYNVMVQCWAHK 259
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 102/254 (40%), Gaps = 42/254 (16%)
Query: 62 LQVLGQGNGGTVF--------KVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPY 113
L+ LGQG+ G V+ K + +A+ + R E ++++ +
Sbjct: 21 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 80
Query: 114 IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDI----------ICTISRQVL 163
+V+ + +K + ++ME M G L+ Y++S +E+ + ++ ++
Sbjct: 81 VVRLLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 164 KGLFYMHSRNIVHRDIKPANVLINEKMEHPCG----YSCLYESGEARHRKHG-------- 211
G+ Y++++ VHRD+ N ++ G +YE+ R G
Sbjct: 140 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 199
Query: 212 ------GYNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPEC 264
G ++D+WSFGV + E+ + P+ E +M +P + P
Sbjct: 200 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP-- 257
Query: 265 SSEKFRDFIRCCLQ 278
E+ D +R C Q
Sbjct: 258 --ERVTDLMRMCWQ 269
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 23/148 (15%)
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR--LSEDIICTISRQV 162
I++ + P ++ I + G +++ YM G L ++++ +D+I QV
Sbjct: 143 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-GFGLQV 201
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKM-----EHPCGYSCLYESGEARHRKHGG----- 212
KG+ ++ S+ VHRD+ N +++EK + + ++ H K G
Sbjct: 202 AKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 261
Query: 213 --------YNGFA--ADIWSFGVTMMEL 230
F +D+WSFGV + EL
Sbjct: 262 WMALESLQTQKFTTKSDVWSFGVLLWEL 289
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 111/268 (41%), Gaps = 61/268 (22%)
Query: 55 GLSQLEKLQVLGQGNGGTV----FKVRHKQTLALYALKVMQCDRGTPPNP-----QELNI 105
G L L+ LG G+ G V + +T+++ A+K ++ D + P +E+N
Sbjct: 10 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 106 LRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSL-EIYVKSRGRLSEDIICTISRQVLK 164
+ + +++ + + P + ++ E GSL + K +G + + QV +
Sbjct: 69 MHSLDHRNLIRLYGVVLTPP--MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAE 126
Query: 165 GLFYMHSRNIVHRDIKPANVLINEK-----------------------MEH---PCGYSC 198
G+ Y+ S+ +HRD+ N+L+ + EH P + C
Sbjct: 127 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW-C 185
Query: 199 LYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSL----MLAIC 254
ES + R H A+D W FGVT+ E++ GQEP ++ L +L
Sbjct: 186 APESLKTRTFSH------ASDTWMFGVTLWEMFT-------YGQEP-WIGLNGSQILHKI 231
Query: 255 FREPPSLP---ECSSEKFRDFIRCCLQK 279
+E LP +C + + ++C K
Sbjct: 232 DKEGERLPRPEDCPQDIYNVMVQCWAHK 259
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 41/207 (19%)
Query: 65 LGQGNGGTVF-----KVRHKQTLALYALKVMQ--CDRGTPPNPQELNILRQTNSPYIVKC 117
LG+G G VF + +Q L A+K ++ + +E +L +IV+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRG---RL---SEDI---------ICTISRQV 162
+ T+ + ++ EYM G L +++S G +L ED+ + ++ QV
Sbjct: 80 FGVCTEGR-PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG-YSCLYESGEARHRKHGG--------- 212
G+ Y+ + VHRD+ N L+ + + G + + + + GG
Sbjct: 139 AAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWM 198
Query: 213 ------YNGFA--ADIWSFGVTMMELY 231
Y F +D+WSFGV + E++
Sbjct: 199 PPESILYRKFTTESDVWSFGVVLWEIF 225
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 101/255 (39%), Gaps = 44/255 (17%)
Query: 62 LQVLGQGNGGTVFKVRHKQTL---ALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCH 118
L+ LGQG+ G V++ + + A + V + + + L + + CH
Sbjct: 22 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR-ERIEFLNEASVMKGFTCH 80
Query: 119 QIFTKPSGEVS------ILMEYMDAGSLEIYVKSRGRLSEDI----------ICTISRQV 162
+ + G VS ++ME M G L+ Y++S +E+ + ++ ++
Sbjct: 81 HV-VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG----YSCLYESGEARHRKHG------- 211
G+ Y++++ VHRD+ N ++ G +YE+ R G
Sbjct: 140 ADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 212 -------GYNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPE 263
G ++D+WSFGV + E+ + P+ E +M +P + P
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP- 258
Query: 264 CSSEKFRDFIRCCLQ 278
E+ D +R C Q
Sbjct: 259 ---ERVTDLMRMCWQ 270
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 23/148 (15%)
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR--LSEDIICTISRQV 162
I++ + P ++ I + G +++ YM G L ++++ +D+I QV
Sbjct: 89 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-GFGLQV 147
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKM-----EHPCGYSCLYESGEARHRKHGG----- 212
KG+ ++ S+ VHRD+ N +++EK + + ++ H K G
Sbjct: 148 AKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 207
Query: 213 --------YNGFA--ADIWSFGVTMMEL 230
F +D+WSFGV + EL
Sbjct: 208 WMALESLQTQKFTTKSDVWSFGVLLWEL 235
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 23/148 (15%)
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR--LSEDIICTISRQV 162
I++ + P ++ I + G +++ YM G L ++++ +D+I QV
Sbjct: 84 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-GFGLQV 142
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKM-----EHPCGYSCLYESGEARHRKHGG----- 212
KG+ ++ S+ VHRD+ N +++EK + + ++ H K G
Sbjct: 143 AKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 202
Query: 213 --------YNGFA--ADIWSFGVTMMEL 230
F +D+WSFGV + EL
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWEL 230
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 23/148 (15%)
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR--LSEDIICTISRQV 162
I++ + P ++ I + G +++ YM G L ++++ +D+I QV
Sbjct: 82 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-GFGLQV 140
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKM-----EHPCGYSCLYESGEARHRKHGG----- 212
KG+ ++ S+ VHRD+ N +++EK + + ++ H K G
Sbjct: 141 AKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 200
Query: 213 --------YNGFA--ADIWSFGVTMMEL 230
F +D+WSFGV + EL
Sbjct: 201 WMALESLQTQKFTTKSDVWSFGVLLWEL 228
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 23/148 (15%)
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR--LSEDIICTISRQV 162
I++ + P ++ I + G +++ YM G L ++++ +D+I QV
Sbjct: 84 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-GFGLQV 142
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKM-----EHPCGYSCLYESGEARHRKHGG----- 212
KG+ ++ S+ VHRD+ N +++EK + + ++ H K G
Sbjct: 143 AKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 202
Query: 213 --------YNGFA--ADIWSFGVTMMEL 230
F +D+WSFGV + EL
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWEL 230
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 41/207 (19%)
Query: 65 LGQGNGGTVF-----KVRHKQTLALYALKVMQ--CDRGTPPNPQELNILRQTNSPYIVKC 117
LG+G G VF + +Q L A+K ++ + +E +L +IV+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRG---RL---SEDI---------ICTISRQV 162
+ T+ + ++ EYM G L +++S G +L ED+ + ++ QV
Sbjct: 86 FGVCTE-GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG-YSCLYESGEARHRKHGG--------- 212
G+ Y+ + VHRD+ N L+ + + G + + + + GG
Sbjct: 145 AAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWM 204
Query: 213 ------YNGFA--ADIWSFGVTMMELY 231
Y F +D+WSFGV + E++
Sbjct: 205 PPESILYRKFTTESDVWSFGVVLWEIF 231
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 41/207 (19%)
Query: 65 LGQGNGGTVF-----KVRHKQTLALYALKVMQ--CDRGTPPNPQELNILRQTNSPYIVKC 117
LG+G G VF + +Q L A+K ++ + +E +L +IV+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKSRG---RL---SEDI---------ICTISRQV 162
+ T+ + ++ EYM G L +++S G +L ED+ + ++ QV
Sbjct: 109 FGVCTEGR-PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG-YSCLYESGEARHRKHGG--------- 212
G+ Y+ + VHRD+ N L+ + + G + + + + GG
Sbjct: 168 AAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWM 227
Query: 213 ------YNGFA--ADIWSFGVTMMELY 231
Y F +D+WSFGV + E++
Sbjct: 228 PPESILYRKFTTESDVWSFGVVLWEIF 254
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 111/268 (41%), Gaps = 61/268 (22%)
Query: 55 GLSQLEKLQVLGQGNGGTV----FKVRHKQTLALYALKVMQCDRGTPPNP-----QELNI 105
G L L+ LG G+ G V + +T+++ A+K ++ D + P +E+N
Sbjct: 6 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 106 LRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSL-EIYVKSRGRLSEDIICTISRQVLK 164
+ + +++ + + P + ++ E GSL + K +G + + QV +
Sbjct: 65 MHSLDHRNLIRLYGVVLTPP--MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAE 122
Query: 165 GLFYMHSRNIVHRDIKPANVLINEK-----------------------MEH---PCGYSC 198
G+ Y+ S+ +HRD+ N+L+ + EH P + C
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW-C 181
Query: 199 LYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSL----MLAIC 254
ES + R H A+D W FGVT+ E++ GQEP ++ L +L
Sbjct: 182 APESLKTRTFSH------ASDTWMFGVTLWEMFTY-------GQEP-WIGLNGSQILHKI 227
Query: 255 FREPPSLP---ECSSEKFRDFIRCCLQK 279
+E LP +C + + ++C K
Sbjct: 228 DKEGERLPRPEDCPQDIYNVMVQCWAHK 255
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 23/148 (15%)
Query: 105 ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGR--LSEDIICTISRQV 162
I++ + P ++ I + G +++ YM G L ++++ +D+I QV
Sbjct: 85 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-GFGLQV 143
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKM-----EHPCGYSCLYESGEARHRKHGG----- 212
KG+ ++ S+ VHRD+ N +++EK + + ++ H K G
Sbjct: 144 AKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 203
Query: 213 --------YNGFA--ADIWSFGVTMMEL 230
F +D+WSFGV + EL
Sbjct: 204 WMALESLQTQKFTTKSDVWSFGVLLWEL 231
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 84/200 (42%), Gaps = 33/200 (16%)
Query: 57 SQLEKLQVLGQGNGGTVF--KVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYI 114
S+L +Q +G G G V +K +A+ ++ + +E ++ + + P +
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR--EGAMSEEDFIEEAEVMMKLSHPKL 64
Query: 115 VKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRN 173
V+ + + + + + ++ E+M+ G L Y+++ RG + + + + V +G+ Y+ +
Sbjct: 65 VQLYGVCLEQA-PICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAS 123
Query: 174 IVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFA---------------- 217
++HRD+ N L+ E + G R Y
Sbjct: 124 VIHRDLAARNCLVGENQVIKVS-----DFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF 178
Query: 218 ------ADIWSFGVTMMELY 231
+D+WSFGV M E++
Sbjct: 179 SRYSSKSDVWSFGVLMWEVF 198
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 111/268 (41%), Gaps = 61/268 (22%)
Query: 55 GLSQLEKLQVLGQGNGGTV----FKVRHKQTLALYALKVMQCDRGTPPNP-----QELNI 105
G L L+ LG G+ G V + +T+++ A+K ++ D + P +E+N
Sbjct: 6 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 106 LRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSL-EIYVKSRGRLSEDIICTISRQVLK 164
+ + +++ + + P + ++ E GSL + K +G + + QV +
Sbjct: 65 MHSLDHRNLIRLYGVVLTPP--MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAE 122
Query: 165 GLFYMHSRNIVHRDIKPANVLINEK-----------------------MEH---PCGYSC 198
G+ Y+ S+ +HRD+ N+L+ + EH P + C
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAW-C 181
Query: 199 LYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSL----MLAIC 254
ES + R H A+D W FGVT+ E++ GQEP ++ L +L
Sbjct: 182 APESLKTRTFSH------ASDTWMFGVTLWEMFTY-------GQEP-WIGLNGSQILHKI 227
Query: 255 FREPPSLP---ECSSEKFRDFIRCCLQK 279
+E LP +C + + ++C K
Sbjct: 228 DKEGERLPRPEDCPQDIYNVMVQCWAHK 255
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 111/268 (41%), Gaps = 61/268 (22%)
Query: 55 GLSQLEKLQVLGQGNGGTV----FKVRHKQTLALYALKVMQCDRGTPPNP-----QELNI 105
G L L+ LG G+ G V + +T+++ A+K ++ D + P +E+N
Sbjct: 6 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 106 LRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSL-EIYVKSRGRLSEDIICTISRQVLK 164
+ + +++ + + P + ++ E GSL + K +G + + QV +
Sbjct: 65 MHSLDHRNLIRLYGVVLTPP--MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAE 122
Query: 165 GLFYMHSRNIVHRDIKPANVLINEK-----------------------MEH---PCGYSC 198
G+ Y+ S+ +HRD+ N+L+ + EH P + C
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW-C 181
Query: 199 LYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSL----MLAIC 254
ES + R H A+D W FGVT+ E++ GQEP ++ L +L
Sbjct: 182 APESLKTRTFSH------ASDTWMFGVTLWEMFTY-------GQEP-WIGLNGSQILHKI 227
Query: 255 FREPPSLP---ECSSEKFRDFIRCCLQK 279
+E LP +C + + ++C K
Sbjct: 228 DKEGERLPRPEDCPQDIYNVMVQCWAHK 255
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 86/205 (41%), Gaps = 42/205 (20%)
Query: 125 SGEVSILMEYMDAGSLEIYVKSR-----------GRLSED-----IICTISRQVLKGLFY 168
G + +++EY G+L Y+++R R+ E+ + + + Q+ +G+ Y
Sbjct: 113 DGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEY 172
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG------------- 215
+ S+ +HRD+ NVL+ E L NG
Sbjct: 173 LASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALF 232
Query: 216 -----FAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFR-EPPSLPECSSEK 268
+D+WSFGV M E++ +G P+ PG + L +L R + P+ C++E
Sbjct: 233 DRVYTHQSDVWSFGVLMWEIFTLGGSPY--PGIPVEELFKLLKEGHRMDKPA--NCTNEL 288
Query: 269 FRDFIRCCLQKGDPSKRWTASQLLS 293
+ +R C PS+R T QL+
Sbjct: 289 YM-MMRDCWH-AVPSQRPTFKQLVE 311
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 86/205 (41%), Gaps = 42/205 (20%)
Query: 125 SGEVSILMEYMDAGSLEIYVKSR-----------GRLSED-----IICTISRQVLKGLFY 168
G + +++EY G+L Y+++R R+ E+ + + + Q+ +G+ Y
Sbjct: 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEY 172
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNG------------- 215
+ S+ +HRD+ NVL+ E L NG
Sbjct: 173 LASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALF 232
Query: 216 -----FAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFR-EPPSLPECSSEK 268
+D+WSFGV M E++ +G P+ PG + L +L R + P+ C++E
Sbjct: 233 DRVYTHQSDVWSFGVLMWEIFTLGGSPY--PGIPVEELFKLLKEGHRMDKPA--NCTNEL 288
Query: 269 FRDFIRCCLQKGDPSKRWTASQLLS 293
+ +R C PS+R T QL+
Sbjct: 289 YM-MMRDCWH-AVPSQRPTFKQLVE 311
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 85/202 (42%), Gaps = 37/202 (18%)
Query: 65 LGQGNGGTVF--------KVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVK 116
LGQG+ G V+ K + +A+ + R E +++++ N ++V+
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICT---------ISRQVLKGL 166
+ ++ + ++ME M G L+ Y++S R ++ + + ++ ++ G+
Sbjct: 93 LLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 151
Query: 167 FYMHSRNIVHRDIKPANVLINEKMEHPCG----YSCLYESGEARHRKHG----------- 211
Y+++ VHRD+ N ++ E G +YE+ R G
Sbjct: 152 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES 211
Query: 212 ---GYNGFAADIWSFGVTMMEL 230
G +D+WSFGV + E+
Sbjct: 212 LKDGVFTTYSDVWSFGVVLWEI 233
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 84/202 (41%), Gaps = 37/202 (18%)
Query: 65 LGQGNGGTVF--------KVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVK 116
LGQG+ G V+ K + +A+ + R E +++++ N ++V+
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICT---------ISRQVLKGL 166
+ ++ + ++ME M G L+ Y++S R + + + ++ ++ G+
Sbjct: 93 LLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 151
Query: 167 FYMHSRNIVHRDIKPANVLINEKMEHPCG----YSCLYESGEARHRKHG----------- 211
Y+++ VHRD+ N ++ E G +YE+ R G
Sbjct: 152 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES 211
Query: 212 ---GYNGFAADIWSFGVTMMEL 230
G +D+WSFGV + E+
Sbjct: 212 LKDGVFTTYSDVWSFGVVLWEI 233
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 100/255 (39%), Gaps = 44/255 (17%)
Query: 62 LQVLGQGNGGTVFKVRHKQTL---ALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCH 118
L+ LGQG+ G V++ + + A + V + + + L + + CH
Sbjct: 22 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR-ERIEFLNEASVMKGFTCH 80
Query: 119 QIFTKPSGEVS------ILMEYMDAGSLEIYVKSRGRLSEDI----------ICTISRQV 162
+ + G VS ++ME M G L+ Y++S +E+ + ++ ++
Sbjct: 81 HV-VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG-YSCLYESGEARHRKHGGYNGF----- 216
G+ Y++++ VHRD+ N ++ G + + E + GG
Sbjct: 140 ADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 217 ------------AADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPE 263
++D+WSFGV + E+ + P+ E +M +P + P
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP- 258
Query: 264 CSSEKFRDFIRCCLQ 278
E+ D +R C Q
Sbjct: 259 ---ERVTDLMRMCWQ 270
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/254 (19%), Positives = 101/254 (39%), Gaps = 42/254 (16%)
Query: 62 LQVLGQGNGGTVF--------KVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPY 113
L+ LGQG+ G V+ K + +A+ + R E ++++ +
Sbjct: 19 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 78
Query: 114 IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDI----------ICTISRQVL 163
+V+ + +K + ++ME M G L+ Y++S +E+ + ++ ++
Sbjct: 79 VVRLLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 164 KGLFYMHSRNIVHRDIKPANVLINEKMEHPCG-YSCLYESGEARHRKHGGYNGF------ 216
G+ Y++++ VHRD+ N ++ G + + E + GG
Sbjct: 138 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 197
Query: 217 -----------AADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPEC 264
++D+WSFGV + E+ + P+ E +M +P + P
Sbjct: 198 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP-- 255
Query: 265 SSEKFRDFIRCCLQ 278
E+ D +R C Q
Sbjct: 256 --ERVTDLMRMCWQ 267
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 100/255 (39%), Gaps = 44/255 (17%)
Query: 62 LQVLGQGNGGTVFKVRHKQTL---ALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCH 118
L+ LGQG+ G V++ + + A + V + + + L + + CH
Sbjct: 22 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR-ERIEFLNEASVMKGFTCH 80
Query: 119 QIFTKPSGEVS------ILMEYMDAGSLEIYVKSRGRLSEDI----------ICTISRQV 162
+ + G VS ++ME M G L+ Y++S +E+ + ++ ++
Sbjct: 81 HV-VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 163 LKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG-YSCLYESGEARHRKHGGYNGF----- 216
G+ Y++++ VHRD+ N ++ G + + E + GG
Sbjct: 140 ADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 217 ------------AADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPE 263
++D+WSFGV + E+ + P+ E +M +P + P
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP- 258
Query: 264 CSSEKFRDFIRCCLQ 278
E+ D +R C Q
Sbjct: 259 ---ERVTDLMRMCWQ 270
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 29/201 (14%)
Query: 64 VLGQGNGGTVFKVR--HKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQIF 121
+LG+G G V+K R +A+ LK + G E+ ++ +++
Sbjct: 37 ILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96
Query: 122 TKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVL-----KGLFYMHSR---N 173
P+ E ++ YM GS+ ++ R S+ + RQ + +GL Y+H
Sbjct: 97 MTPT-ERLLVYPYMANGSVASCLRERPE-SQPPLDWPKRQRIALGSARGLAYLHDHCDPK 154
Query: 174 IVHRDIKPANVLINEKMEHPCGYSCL-----YESGEARHRKHG------------GYNGF 216
I+HRD+K AN+L++E+ E G L Y+ G G +
Sbjct: 155 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSE 214
Query: 217 AADIWSFGVTMMELYMGYYPF 237
D++ +GV ++EL G F
Sbjct: 215 KTDVFGYGVMLLELITGQRAF 235
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 85/202 (42%), Gaps = 37/202 (18%)
Query: 65 LGQGNGGTVF--------KVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVK 116
LGQG+ G V+ K + +A+ + R E +++++ N ++V+
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICT---------ISRQVLKGL 166
+ ++ + ++ME M G L+ Y++S R ++ + + ++ ++ G+
Sbjct: 83 LLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 141
Query: 167 FYMHSRNIVHRDIKPANVLINEKMEHPCG----YSCLYESGEARHRKHG----------- 211
Y+++ VHRD+ N ++ E G +YE+ R G
Sbjct: 142 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES 201
Query: 212 ---GYNGFAADIWSFGVTMMEL 230
G +D+WSFGV + E+
Sbjct: 202 LKDGVFTTYSDVWSFGVVLWEI 223
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 84/202 (41%), Gaps = 37/202 (18%)
Query: 65 LGQGNGGTVF--------KVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVK 116
LGQG+ G V+ K + +A+ + R E +++++ N ++V+
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICT---------ISRQVLKGL 166
+ ++ + ++ME M G L+ Y++S R + + + ++ ++ G+
Sbjct: 84 LLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 142
Query: 167 FYMHSRNIVHRDIKPANVLINEKMEHPCG----YSCLYESGEARHRKHG----------- 211
Y+++ VHRD+ N ++ E G +YE+ R G
Sbjct: 143 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES 202
Query: 212 ---GYNGFAADIWSFGVTMMEL 230
G +D+WSFGV + E+
Sbjct: 203 LKDGVFTTYSDVWSFGVVLWEI 224
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 84/202 (41%), Gaps = 37/202 (18%)
Query: 65 LGQGNGGTVF--------KVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVK 116
LGQG+ G V+ K + +A+ + R E +++++ N ++V+
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICT---------ISRQVLKGL 166
+ ++ + ++ME M G L+ Y++S R + + + ++ ++ G+
Sbjct: 87 LLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 167 FYMHSRNIVHRDIKPANVLINEKMEHPCG----YSCLYESGEARHRKHG----------- 211
Y+++ VHRD+ N ++ E G +YE+ R G
Sbjct: 146 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES 205
Query: 212 ---GYNGFAADIWSFGVTMMEL 230
G +D+WSFGV + E+
Sbjct: 206 LKDGVFTTYSDVWSFGVVLWEI 227
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 84/202 (41%), Gaps = 37/202 (18%)
Query: 65 LGQGNGGTVF--------KVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVK 116
LGQG+ G V+ K + +A+ + R E +++++ N ++V+
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICT---------ISRQVLKGL 166
+ ++ + ++ME M G L+ Y++S R + + + ++ ++ G+
Sbjct: 80 LLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 167 FYMHSRNIVHRDIKPANVLINEKMEHPCG----YSCLYESGEARHRKHG----------- 211
Y+++ VHRD+ N ++ E G +YE+ R G
Sbjct: 139 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES 198
Query: 212 ---GYNGFAADIWSFGVTMMEL 230
G +D+WSFGV + E+
Sbjct: 199 LKDGVFTTYSDVWSFGVVLWEI 220
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 84/202 (41%), Gaps = 37/202 (18%)
Query: 65 LGQGNGGTVF--------KVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVK 116
LGQG+ G V+ K + +A+ + R E +++++ N ++V+
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICT---------ISRQVLKGL 166
+ ++ + ++ME M G L+ Y++S R + + + ++ ++ G+
Sbjct: 86 LLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 167 FYMHSRNIVHRDIKPANVLINEKMEHPCG----YSCLYESGEARHRKHG----------- 211
Y+++ VHRD+ N ++ E G +YE+ R G
Sbjct: 145 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES 204
Query: 212 ---GYNGFAADIWSFGVTMMEL 230
G +D+WSFGV + E+
Sbjct: 205 LKDGVFTTYSDVWSFGVVLWEI 226
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 86/218 (39%), Gaps = 45/218 (20%)
Query: 65 LGQGNGGTVF--------KVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVK 116
LG+G G VF + K +A+ ALK +E +L +IVK
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL-AARKDFQREAELLTNLQHEHIVK 81
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKS----------------RGRLSEDIICTISR 160
+ + + ++ EYM G L ++++ +G L + I+
Sbjct: 82 FYGV-CGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 140
Query: 161 QVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG-YSCLYESGEARHRKHGG------- 212
Q+ G+ Y+ S++ VHRD+ N L+ + G + + + + GG
Sbjct: 141 QIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR 200
Query: 213 --------YNGFA--ADIWSFGVTMMELYM-GYYPFLE 239
Y F +D+WSFGV + E++ G P+ +
Sbjct: 201 WMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQ 238
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 84/202 (41%), Gaps = 37/202 (18%)
Query: 65 LGQGNGGTVF--------KVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVK 116
LGQG+ G V+ K + +A+ + R E +++++ N ++V+
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICT---------ISRQVLKGL 166
+ ++ + ++ME M G L+ Y++S R + + + ++ ++ G+
Sbjct: 86 LLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 167 FYMHSRNIVHRDIKPANVLINEKMEHPCG----YSCLYESGEARHRKHG----------- 211
Y+++ VHRD+ N ++ E G +YE+ R G
Sbjct: 145 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES 204
Query: 212 ---GYNGFAADIWSFGVTMMEL 230
G +D+WSFGV + E+
Sbjct: 205 LKDGVFTTYSDVWSFGVVLWEI 226
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 83/191 (43%), Gaps = 26/191 (13%)
Query: 64 VLGQGNGGTVFK--VRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQIF 121
++G G G V+K +R +AL + + +G E+ L P++V F
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVAL-KRRTPESSQGIEEFETEIETLSFCRHPHLVSLIG-F 103
Query: 122 TKPSGEVSILMEYMDAGSLEIYVKSRG----RLSEDIICTISRQVLKGLFYMHSRNIVHR 177
E+ ++ +YM+ G+L+ ++ +S + I +GL Y+H+R I+HR
Sbjct: 104 CDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHR 163
Query: 178 DIKPANVLINEKMEHPCGYSCLYESGEARHRKH-----GGYNGF-------------AAD 219
D+K N+L++E + + G + H G G+ +D
Sbjct: 164 DVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSD 223
Query: 220 IWSFGVTMMEL 230
++SFGV + E+
Sbjct: 224 VYSFGVVLFEV 234
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 24/172 (13%)
Query: 59 LEKLQVLGQGNGGTVFKVRHKQTLALY-ALKVMQC-DRGTPPNPQELNIL---RQTNSPY 113
L+ L+V +G G V+K Q L Y A+K+ D+ + N E+ L + N
Sbjct: 26 LQLLEVKARGRFGCVWKA---QLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQ 82
Query: 114 IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSR- 172
+ + T ++ ++ + + GSL ++K+ +S + +C I+ + +GL Y+H
Sbjct: 83 FIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN-VVSWNELCHIAETMARGLAYLHEDI 141
Query: 173 ---------NIVHRDIKPANVLINEKMEHPC----GYSCLYESGEARHRKHG 211
I HRDIK NVL+ + C G + +E+G++ HG
Sbjct: 142 PGLKDGHKPAISHRDIKSKNVLLKNNLT-ACIADFGLALKFEAGKSAGDTHG 192
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 86/202 (42%), Gaps = 31/202 (15%)
Query: 64 VLGQGNGGTVFKVRHKQTLALYALKVMQCDR---GTPPNPQELNILRQTNSPYIVKCHQI 120
+LG+G G V+K R L A+K ++ +R G E+ ++ +++
Sbjct: 45 ILGRGGFGKVYKGRLADG-TLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGF 103
Query: 121 FTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVL-----KGLFYMHSR--- 172
P+ E ++ YM GS+ ++ R S+ + RQ + +GL Y+H
Sbjct: 104 CMTPT-ERLLVYPYMANGSVASCLRERPE-SQPPLDWPKRQRIALGSARGLAYLHDHCDP 161
Query: 173 NIVHRDIKPANVLINEKMEHPCGYSCL-----YESGEARHRKHG------------GYNG 215
I+HRD+K AN+L++E+ E G L Y+ G G +
Sbjct: 162 KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSS 221
Query: 216 FAADIWSFGVTMMELYMGYYPF 237
D++ +GV ++EL G F
Sbjct: 222 EKTDVFGYGVMLLELITGQRAF 243
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 74/168 (44%), Gaps = 36/168 (21%)
Query: 102 ELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVK-SRGRLSE-------D 153
E I+ + N IV+C + + S ILME M G L+ +++ +R R S+ D
Sbjct: 83 EALIISKFNHQNIVRCIGVSLQ-SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLD 141
Query: 154 IICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEAR------- 206
++ ++R + G Y+ + +HRDI N L+ P + + + G AR
Sbjct: 142 LL-HVARDIACGCQYLEENHFIHRDIAARNCLLT--CPGPGRVAKIGDFGMARDIYRASY 198
Query: 207 HRKHG----------------GYNGFAADIWSFGVTMMELY-MGYYPF 237
+RK G G D WSFGV + E++ +GY P+
Sbjct: 199 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 246
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 84/202 (41%), Gaps = 37/202 (18%)
Query: 65 LGQGNGGTVF--------KVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVK 116
LGQG+ G V+ K + +A+ + R E +++++ N ++V+
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICT---------ISRQVLKGL 166
+ ++ + ++ME M G L+ Y++S R + + + ++ ++ G+
Sbjct: 115 LLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 173
Query: 167 FYMHSRNIVHRDIKPANVLINEKMEHPCG----YSCLYESGEARHRKHG----------- 211
Y+++ VHRD+ N ++ E G +YE+ R G
Sbjct: 174 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES 233
Query: 212 ---GYNGFAADIWSFGVTMMEL 230
G +D+WSFGV + E+
Sbjct: 234 LKDGVFTTYSDVWSFGVVLWEI 255
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 83/200 (41%), Gaps = 33/200 (16%)
Query: 57 SQLEKLQVLGQGNGGTVF--KVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYI 114
S+L +Q +G G G V +K +A+ ++ + +E ++ + + P +
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR--EGAMSEEDFIEEAEVMMKLSHPKL 62
Query: 115 VKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRN 173
V+ + + + + + ++ E+M+ G L Y+++ RG + + + + V +G+ Y+
Sbjct: 63 VQLYGVCLEQA-PICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 121
Query: 174 IVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFA---------------- 217
++HRD+ N L+ E + G R Y
Sbjct: 122 VIHRDLAARNCLVGENQVIKVS-----DFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF 176
Query: 218 ------ADIWSFGVTMMELY 231
+D+WSFGV M E++
Sbjct: 177 SRYSSKSDVWSFGVLMWEVF 196
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 83/200 (41%), Gaps = 33/200 (16%)
Query: 57 SQLEKLQVLGQGNGGTVF--KVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYI 114
S+L +Q +G G G V +K +A+ ++ + +E ++ + + P +
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR--EGAMSEEDFIEEAEVMMKLSHPKL 64
Query: 115 VKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRN 173
V+ + + + + + ++ E+M+ G L Y+++ RG + + + + V +G+ Y+
Sbjct: 65 VQLYGVCLEQA-PICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 123
Query: 174 IVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFA---------------- 217
++HRD+ N L+ E + G R Y
Sbjct: 124 VIHRDLAARNCLVGENQVIKVS-----DFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF 178
Query: 218 ------ADIWSFGVTMMELY 231
+D+WSFGV M E++
Sbjct: 179 SRYSSKSDVWSFGVLMWEVF 198
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 83/191 (43%), Gaps = 26/191 (13%)
Query: 64 VLGQGNGGTVFK--VRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQIF 121
++G G G V+K +R +AL + + +G E+ L P++V F
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVAL-KRRTPESSQGIEEFETEIETLSFCRHPHLVSLIG-F 103
Query: 122 TKPSGEVSILMEYMDAGSLEIYVKSRG----RLSEDIICTISRQVLKGLFYMHSRNIVHR 177
E+ ++ +YM+ G+L+ ++ +S + I +GL Y+H+R I+HR
Sbjct: 104 CDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHR 163
Query: 178 DIKPANVLINEKMEHPCGYSCLYESGEARHRKH-----GGYNGF-------------AAD 219
D+K N+L++E + + G + H G G+ +D
Sbjct: 164 DVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSD 223
Query: 220 IWSFGVTMMEL 230
++SFGV + E+
Sbjct: 224 VYSFGVVLFEV 234
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 74/168 (44%), Gaps = 36/168 (21%)
Query: 102 ELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVK-SRGRLSE-------D 153
E I+ + N IV+C + + S ILME M G L+ +++ +R R S+ D
Sbjct: 98 EALIISKFNHQNIVRCIGVSLQ-SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLD 156
Query: 154 IICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEAR------- 206
++ ++R + G Y+ + +HRDI N L+ P + + + G AR
Sbjct: 157 LL-HVARDIACGCQYLEENHFIHRDIAARNCLLT--CPGPGRVAKIGDFGMARDIYRASY 213
Query: 207 HRKHG----------------GYNGFAADIWSFGVTMMELY-MGYYPF 237
+RK G G D WSFGV + E++ +GY P+
Sbjct: 214 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 261
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 128 VSILMEYMDAG---SLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANV 184
++++MEY+ L+ +++S + ++I Q+ + + ++HS I HRDIKP N+
Sbjct: 113 LNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNL 172
Query: 185 LINEK 189
L+N K
Sbjct: 173 LVNSK 177
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 83/200 (41%), Gaps = 33/200 (16%)
Query: 57 SQLEKLQVLGQGNGGTVF--KVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYI 114
S+L +Q +G G G V +K +A+ ++ + +E ++ + + P +
Sbjct: 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR--EGAMSEEDFIEEAEVMMKLSHPKL 67
Query: 115 VKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRN 173
V+ + + + + + ++ E+M+ G L Y+++ RG + + + + V +G+ Y+
Sbjct: 68 VQLYGVCLEQA-PICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 126
Query: 174 IVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFA---------------- 217
++HRD+ N L+ E + G R Y
Sbjct: 127 VIHRDLAARNCLVGENQVIKVS-----DFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF 181
Query: 218 ------ADIWSFGVTMMELY 231
+D+WSFGV M E++
Sbjct: 182 SRYSSKSDVWSFGVLMWEVF 201
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 102/254 (40%), Gaps = 42/254 (16%)
Query: 62 LQVLGQGNGGTVF--------KVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPY 113
L+ LGQG+ G V+ K + +A+ + R E ++++ +
Sbjct: 23 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 82
Query: 114 IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDI----------ICTISRQVL 163
+V+ + +K + ++ME M G L+ Y++S +E+ + ++ ++
Sbjct: 83 VVRLLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 164 KGLFYMHSRNIVHRDIKPANVLINEKMEHPCG----YSCLYESGEARHRKHG-------- 211
G+ Y++++ VHR++ N ++ G +YE+ R G
Sbjct: 142 DGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 201
Query: 212 ------GYNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPEC 264
G ++D+WSFGV + E+ + P+ E +M +P + P
Sbjct: 202 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP-- 259
Query: 265 SSEKFRDFIRCCLQ 278
E+ D +R C Q
Sbjct: 260 --ERVTDLMRMCWQ 271
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALK----VMQCDRGTPPNPQELNILRQ-TN 110
L + E ++ LG+G G V+K ++T + A+K Q +E+ IL + +
Sbjct: 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSG 67
Query: 111 SPYIVKCHQIFTKPSG-EVSILMEYMDAGSLEIYVKSRGRLSEDIICT-ISRQVLKGLFY 168
IV + + +V ++ +YM+ +++ R + E + + Q++K + Y
Sbjct: 68 HENIVNLLNVLRADNDRDVYLVFDYMET---DLHAVIRANILEPVHKQYVVYQLIKVIKY 124
Query: 169 MHSRNIVHRDIKPANVLIN 187
+HS ++HRD+KP+N+L+N
Sbjct: 125 LHSGGLLHRDMKPSNILLN 143
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 102/254 (40%), Gaps = 42/254 (16%)
Query: 62 LQVLGQGNGGTVF--------KVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPY 113
L+ LGQG+ G V+ K + +A+ + R E ++++ +
Sbjct: 22 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 81
Query: 114 IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDI----------ICTISRQVL 163
+V+ + +K + ++ME M G L+ Y++S +E+ + ++ ++
Sbjct: 82 VVRLLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 164 KGLFYMHSRNIVHRDIKPANVLINEKMEHPCG----YSCLYESGEARHRKHG-------- 211
G+ Y++++ VHR++ N ++ G +YE+ R G
Sbjct: 141 DGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 212 ------GYNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPEC 264
G ++D+WSFGV + E+ + P+ E +M +P + P
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP-- 258
Query: 265 SSEKFRDFIRCCLQ 278
E+ D +R C Q
Sbjct: 259 --ERVTDLMRMCWQ 270
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/251 (18%), Positives = 99/251 (39%), Gaps = 42/251 (16%)
Query: 65 LGQGNGGTVF--------KVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVK 116
LGQG+ G V+ K + +A+ + R E +++++ N ++V+
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICT---------ISRQVLKGL 166
+ ++ + ++ME M G L+ Y++S R + + + ++ ++ G+
Sbjct: 78 LLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 167 FYMHSRNIVHRDIKPANVLINEKMEHPCG-YSCLYESGEARHRKHGGYNGFA-------- 217
Y+++ VHRD+ N ++ E G + + E + GG
Sbjct: 137 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPES 196
Query: 218 ---------ADIWSFGVTMMEL-YMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSE 267
+D+WSFGV + E+ + P+ E +M +P + P+
Sbjct: 197 LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM--- 253
Query: 268 KFRDFIRCCLQ 278
+ +R C Q
Sbjct: 254 -LLELMRMCWQ 263
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 83/200 (41%), Gaps = 33/200 (16%)
Query: 57 SQLEKLQVLGQGNGGTVF--KVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYI 114
S+L +Q +G G G V +K +A+ ++ + +E ++ + + P +
Sbjct: 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR--EGAMSEEDFIEEAEVMMKLSHPKL 65
Query: 115 VKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRN 173
V+ + + + + + ++ E+M+ G L Y+++ RG + + + + V +G+ Y+
Sbjct: 66 VQLYGVCLEQA-PICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 124
Query: 174 IVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFA---------------- 217
++HRD+ N L+ E + G R Y
Sbjct: 125 VIHRDLAARNCLVGENQVIKVS-----DFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF 179
Query: 218 ------ADIWSFGVTMMELY 231
+D+WSFGV M E++
Sbjct: 180 SRYSSKSDVWSFGVLMWEVF 199
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 112 PYIVKCHQIFTKPSGEV-SILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMH 170
P IVK I + S++ EY++ ++ + L++ I ++LK L Y H
Sbjct: 88 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCH 144
Query: 171 SRNIVHRDIKPANVLINEKM 190
S+ I+HRD+KP NV+I+ ++
Sbjct: 145 SQGIMHRDVKPHNVMIDHEL 164
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/251 (19%), Positives = 99/251 (39%), Gaps = 42/251 (16%)
Query: 65 LGQGNGGTVF--------KVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVK 116
LGQG+ G V+ K + +A+ + R E +++++ N ++V+
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICT---------ISRQVLKGL 166
+ ++ + ++ME M G L+ Y++S R + + + ++ ++ G+
Sbjct: 87 LLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 167 FYMHSRNIVHRDIKPANVLINEKMEHPCG-YSCLYESGEARHRKHGGYNGFA-------- 217
Y+++ VHRD+ N ++ E G + + E + GG
Sbjct: 146 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPES 205
Query: 218 ---------ADIWSFGVTMMEL-YMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSE 267
+D+WSFGV + E+ + P+ E +M +P + P+ E
Sbjct: 206 LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFE 265
Query: 268 KFRDFIRCCLQ 278
+R C Q
Sbjct: 266 ----LMRMCWQ 272
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 112 PYIVKCHQIFTKPSGEV-SILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMH 170
P IVK I + S++ EY++ ++ + L++ I ++LK L Y H
Sbjct: 107 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCH 163
Query: 171 SRNIVHRDIKPANVLINEKM 190
S+ I+HRD+KP NV+I+ ++
Sbjct: 164 SQGIMHRDVKPHNVMIDHEL 183
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 112 PYIVKCHQIFTKPSGEV-SILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMH 170
P IVK I + S++ EY++ ++ + L++ I ++LK L Y H
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCH 142
Query: 171 SRNIVHRDIKPANVLINEKM 190
S+ I+HRD+KP NV+I+ ++
Sbjct: 143 SQGIMHRDVKPHNVMIDHEL 162
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 112 PYIVKCHQIFTKPSGEV-SILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMH 170
P IVK I + S++ EY++ ++ + L++ I ++LK L Y H
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCH 143
Query: 171 SRNIVHRDIKPANVLINEKM 190
S+ I+HRD+KP NV+I+ ++
Sbjct: 144 SQGIMHRDVKPHNVMIDHEL 163
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 112 PYIVKCHQIFTKPSGEV-SILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMH 170
P IVK I + S++ EY++ ++ + L++ I ++LK L Y H
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCH 142
Query: 171 SRNIVHRDIKPANVLINEKM 190
S+ I+HRD+KP NV+I+ ++
Sbjct: 143 SQGIMHRDVKPHNVMIDHEL 162
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 52/210 (24%)
Query: 125 SGEVSILMEYMDAGSLEIYVKSR-----------GRLSED-----IICTISRQVLKGLFY 168
G + +++ Y G+L Y+++R R+ E+ + + + Q+ +G+ Y
Sbjct: 113 DGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEY 172
Query: 169 MHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARHRKHGGY-----NG-------- 215
+ S+ +HRD+ NVL+ E + + G AR + Y NG
Sbjct: 173 LASQKCIHRDLAARNVLVTEN-----NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMA 227
Query: 216 ----------FAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFR-EPPSLPE 263
+D+WSFGV M E++ +G P+ PG + L +L R + P+
Sbjct: 228 PEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY--PGIPVEELFKLLKEGHRMDKPA--N 283
Query: 264 CSSEKFRDFIRCCLQKGDPSKRWTASQLLS 293
C++E + +R C PS+R T QL+
Sbjct: 284 CTNELYM-MMRDCWH-AVPSQRPTFKQLVE 311
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 112 PYIVKCHQIFTKPSGEV-SILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMH 170
P IVK I + S++ EY++ ++ + L++ I ++LK L Y H
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCH 143
Query: 171 SRNIVHRDIKPANVLINEKM 190
S+ I+HRD+KP NV+I+ ++
Sbjct: 144 SQGIMHRDVKPHNVMIDHEL 163
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 112 PYIVKCHQIFTKPSGEV-SILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMH 170
P IVK I + S++ EY++ ++ + L++ I ++LK L Y H
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCH 142
Query: 171 SRNIVHRDIKPANVLINEKM 190
S+ I+HRD+KP NV+I+ ++
Sbjct: 143 SQGIMHRDVKPHNVMIDHEL 162
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 112 PYIVKCHQIFTKPSGEV-SILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMH 170
P IVK I + S++ EY++ ++ + L++ I ++LK L Y H
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT---LTDYDIRYYIYELLKALDYCH 142
Query: 171 SRNIVHRDIKPANVLINEKM 190
S+ I+HRD+KP NV+I+ ++
Sbjct: 143 SQGIMHRDVKPHNVMIDHEL 162
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,415,073
Number of Sequences: 62578
Number of extensions: 393785
Number of successful extensions: 3416
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1017
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 788
Number of HSP's gapped (non-prelim): 1595
length of query: 300
length of database: 14,973,337
effective HSP length: 98
effective length of query: 202
effective length of database: 8,840,693
effective search space: 1785819986
effective search space used: 1785819986
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)