Query 040812
Match_columns 300
No_of_seqs 225 out of 2525
Neff 10.1
Searched_HMMs 46136
Date Fri Mar 29 12:03:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040812.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040812hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0615 Serine/threonine prote 100.0 4.1E-58 8.8E-63 385.2 15.9 243 56-300 171-443 (475)
2 KOG0581 Mitogen-activated prot 100.0 9E-54 2E-58 355.9 22.0 240 56-299 78-340 (364)
3 KOG0575 Polo-like serine/threo 100.0 7.7E-53 1.7E-57 369.4 22.2 232 57-298 18-273 (592)
4 KOG0592 3-phosphoinositide-dep 100.0 1.7E-52 3.7E-57 362.1 20.2 238 53-300 69-344 (604)
5 KOG0598 Ribosomal protein S6 k 100.0 2.3E-52 5E-57 347.3 18.4 238 54-300 22-287 (357)
6 KOG0595 Serine/threonine-prote 100.0 2.2E-50 4.7E-55 338.8 19.1 240 53-299 6-273 (429)
7 KOG0616 cAMP-dependent protein 100.0 1.3E-50 2.9E-55 326.9 15.6 237 54-300 41-303 (355)
8 KOG0661 MAPK related serine/th 100.0 5.2E-51 1.1E-55 347.9 11.9 242 54-299 7-296 (538)
9 KOG0583 Serine/threonine prote 100.0 6.6E-49 1.4E-53 343.5 22.5 238 54-299 14-280 (370)
10 KOG0593 Predicted protein kina 100.0 4.6E-50 9.9E-55 324.8 13.7 239 57-299 2-289 (396)
11 KOG0605 NDR and related serine 100.0 5.8E-49 1.3E-53 340.1 20.3 240 54-300 138-451 (550)
12 KOG0198 MEKK and related serin 100.0 2.3E-49 5E-54 334.0 17.4 239 56-299 16-281 (313)
13 KOG0600 Cdc2-related protein k 100.0 6.9E-49 1.5E-53 337.2 19.6 240 54-298 114-404 (560)
14 KOG0663 Protein kinase PITSLRE 100.0 2E-48 4.4E-53 319.0 18.5 242 54-299 73-366 (419)
15 KOG0659 Cdk activating kinase 100.0 5.5E-48 1.2E-52 307.5 18.2 237 57-299 2-286 (318)
16 KOG0588 Serine/threonine prote 100.0 8.6E-48 1.9E-52 339.7 18.9 235 56-299 11-268 (786)
17 KOG0597 Serine-threonine prote 100.0 5.6E-48 1.2E-52 335.3 16.5 232 57-299 2-256 (808)
18 cd05612 STKc_PRKX_like Catalyt 100.0 1.2E-47 2.6E-52 329.6 17.9 233 57-299 1-259 (291)
19 KOG0578 p21-activated serine/t 100.0 6E-48 1.3E-52 336.0 16.1 236 54-299 270-528 (550)
20 KOG0591 NIMA (never in mitosis 100.0 6.5E-49 1.4E-53 315.2 8.3 226 55-288 17-275 (375)
21 PTZ00263 protein kinase A cata 100.0 1.9E-47 4.2E-52 333.7 18.1 235 55-299 16-276 (329)
22 KOG0694 Serine/threonine prote 100.0 8.8E-47 1.9E-51 335.1 22.2 237 53-300 364-630 (694)
23 PLN00034 mitogen-activated pro 100.0 2.1E-46 4.6E-51 330.3 24.7 239 54-299 71-333 (353)
24 KOG0610 Putative serine/threon 100.0 1.2E-46 2.5E-51 316.6 21.5 239 52-300 72-398 (459)
25 KOG0585 Ca2+/calmodulin-depend 100.0 4.4E-47 9.5E-52 323.8 18.7 238 55-298 95-376 (576)
26 KOG0580 Serine/threonine prote 100.0 1.4E-47 3E-52 300.9 12.8 234 55-298 20-277 (281)
27 KOG0197 Tyrosine kinases [Sign 100.0 5.5E-47 1.2E-51 328.8 17.6 233 50-292 199-455 (468)
28 cd07869 STKc_PFTAIRE1 Catalyti 100.0 8.5E-46 1.8E-50 319.9 23.9 241 55-300 3-294 (303)
29 KOG0582 Ste20-like serine/thre 100.0 2.6E-46 5.6E-51 317.0 20.0 240 54-300 23-299 (516)
30 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.2E-45 2.6E-50 316.7 24.2 238 55-297 3-288 (288)
31 KOG0033 Ca2+/calmodulin-depend 100.0 3.4E-48 7.4E-53 305.6 6.4 238 56-299 10-272 (355)
32 cd05571 STKc_PKB Catalytic dom 100.0 2.4E-46 5.1E-51 326.1 18.3 227 63-299 1-256 (323)
33 cd07848 STKc_CDKL5 Catalytic d 100.0 9.6E-46 2.1E-50 317.0 21.6 236 57-297 1-287 (287)
34 cd05631 STKc_GRK4 Catalytic do 100.0 8.7E-46 1.9E-50 317.1 21.3 237 58-300 1-267 (285)
35 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2.7E-46 6E-51 327.1 18.2 238 57-299 1-262 (333)
36 KOG0192 Tyrosine kinase specif 100.0 1.3E-45 2.8E-50 320.2 22.0 235 53-293 37-298 (362)
37 PTZ00426 cAMP-dependent protei 100.0 4.1E-46 8.8E-51 326.4 19.1 235 55-299 28-289 (340)
38 cd05626 STKc_LATS2 Catalytic d 100.0 6.2E-46 1.3E-50 330.5 19.9 236 57-299 1-310 (381)
39 cd05628 STKc_NDR1 Catalytic do 100.0 1.4E-45 3.1E-50 326.2 19.9 237 57-300 1-299 (363)
40 KOG0032 Ca2+/calmodulin-depend 100.0 3.2E-45 6.9E-50 320.2 21.8 238 55-299 33-298 (382)
41 cd05585 STKc_YPK1_like Catalyt 100.0 9.1E-46 2E-50 320.9 17.6 225 65-299 1-252 (312)
42 cd05595 STKc_PKB_beta Catalyti 100.0 2.5E-45 5.4E-50 319.6 20.0 227 63-299 1-256 (323)
43 cd05598 STKc_LATS Catalytic do 100.0 7.5E-46 1.6E-50 329.5 16.8 236 57-299 1-306 (376)
44 cd06649 PKc_MEK2 Catalytic dom 100.0 5.6E-45 1.2E-49 318.5 21.5 238 56-299 4-306 (331)
45 KOG0201 Serine/threonine prote 100.0 3.4E-47 7.4E-52 321.9 7.2 235 56-299 12-268 (467)
46 KOG0594 Protein kinase PCTAIRE 100.0 7.8E-45 1.7E-49 302.0 20.7 240 56-299 10-307 (323)
47 cd05588 STKc_aPKC Catalytic do 100.0 5E-45 1.1E-49 318.5 20.6 232 63-299 1-267 (329)
48 cd05593 STKc_PKB_gamma Catalyt 100.0 4.3E-45 9.3E-50 318.7 20.0 227 63-299 1-256 (328)
49 cd05599 STKc_NDR_like Catalyti 100.0 1.6E-45 3.4E-50 326.1 17.5 234 57-299 1-301 (364)
50 PTZ00284 protein kinase; Provi 100.0 1.3E-44 2.7E-49 330.0 23.5 239 55-299 127-443 (467)
51 KOG0660 Mitogen-activated prot 100.0 1E-45 2.2E-50 306.6 14.5 246 50-299 15-315 (359)
52 cd05625 STKc_LATS1 Catalytic d 100.0 1.8E-45 3.8E-50 327.8 17.2 234 57-299 1-310 (382)
53 cd05587 STKc_cPKC Catalytic do 100.0 6.3E-45 1.4E-49 317.3 20.3 232 58-299 1-262 (324)
54 cd05629 STKc_NDR_like_fungal C 100.0 3.3E-45 7.1E-50 325.5 18.2 234 57-299 1-310 (377)
55 cd07859 STKc_TDY_MAPK_plant Ca 100.0 9.5E-45 2.1E-49 317.9 20.9 238 58-299 1-295 (338)
56 cd05590 STKc_nPKC_eta Catalyti 100.0 4.8E-45 1E-49 317.4 18.1 227 63-299 1-258 (320)
57 cd05620 STKc_nPKC_delta Cataly 100.0 8.5E-45 1.9E-49 315.3 19.1 227 63-299 1-253 (316)
58 cd05614 STKc_MSK2_N N-terminal 100.0 1.5E-44 3.3E-49 316.0 20.6 237 58-299 1-272 (332)
59 cd05573 STKc_ROCK_NDR_like Cat 100.0 2.6E-45 5.5E-50 323.1 15.7 234 57-299 1-290 (350)
60 PHA03212 serine/threonine kina 100.0 3.4E-44 7.5E-49 319.4 23.0 234 56-299 91-381 (391)
61 cd05618 STKc_aPKC_iota Catalyt 100.0 1.6E-44 3.5E-49 315.2 20.3 232 63-299 1-267 (329)
62 cd05605 STKc_GRK4_like Catalyt 100.0 2.4E-44 5.2E-49 308.2 21.0 236 58-299 1-266 (285)
63 cd05589 STKc_PKN Catalytic dom 100.0 1.5E-44 3.3E-49 314.9 19.7 231 59-300 1-263 (324)
64 KOG0667 Dual-specificity tyros 100.0 5.8E-45 1.3E-49 322.8 17.2 235 58-299 187-507 (586)
65 cd05596 STKc_ROCK Catalytic do 100.0 9.8E-45 2.1E-49 321.3 18.4 240 54-299 40-309 (370)
66 cd05608 STKc_GRK1 Catalytic do 100.0 3E-44 6.6E-49 306.8 20.8 229 65-299 1-262 (280)
67 cd05570 STKc_PKC Catalytic dom 100.0 1.8E-44 3.9E-49 313.6 19.6 227 63-299 1-257 (318)
68 cd07862 STKc_CDK6 Catalytic do 100.0 5.5E-44 1.2E-48 306.6 22.3 236 57-297 1-290 (290)
69 cd05594 STKc_PKB_alpha Catalyt 100.0 6.6E-45 1.4E-49 317.3 16.7 227 63-299 1-257 (325)
70 cd06650 PKc_MEK1 Catalytic dom 100.0 4.5E-44 9.7E-49 313.0 21.7 239 56-299 4-304 (333)
71 cd05591 STKc_nPKC_epsilon Cata 100.0 1.6E-44 3.4E-49 314.4 18.5 227 63-299 1-259 (321)
72 KOG0611 Predicted serine/threo 100.0 6.3E-45 1.4E-49 305.6 15.1 232 57-298 53-307 (668)
73 cd05584 STKc_p70S6K Catalytic 100.0 1.8E-44 4E-49 314.2 18.4 227 63-299 2-261 (323)
74 cd05619 STKc_nPKC_theta Cataly 100.0 3.4E-44 7.4E-49 311.5 19.7 228 63-300 1-254 (316)
75 cd07872 STKc_PCTAIRE2 Catalyti 100.0 8.7E-44 1.9E-48 308.1 22.3 240 55-299 4-291 (309)
76 KOG0658 Glycogen synthase kina 100.0 5.6E-45 1.2E-49 302.8 13.9 236 58-299 25-311 (364)
77 cd05627 STKc_NDR2 Catalytic do 100.0 1.1E-44 2.5E-49 320.1 16.8 235 57-300 1-299 (360)
78 cd05616 STKc_cPKC_beta Catalyt 100.0 5.4E-44 1.2E-48 311.3 20.4 232 58-299 1-262 (323)
79 cd05592 STKc_nPKC_theta_delta 100.0 4.2E-44 9.2E-49 311.0 19.4 227 63-299 1-253 (316)
80 PTZ00036 glycogen synthase kin 100.0 5.8E-44 1.3E-48 322.6 20.5 239 55-299 64-356 (440)
81 cd06625 STKc_MEKK3_like Cataly 100.0 3.6E-43 7.8E-48 297.1 24.0 233 57-297 2-263 (263)
82 cd05617 STKc_aPKC_zeta Catalyt 100.0 1E-43 2.3E-48 309.9 20.8 232 63-299 1-265 (327)
83 cd07863 STKc_CDK4 Catalytic do 100.0 2.1E-43 4.5E-48 302.6 22.1 235 58-297 1-288 (288)
84 cd05607 STKc_GRK7 Catalytic do 100.0 2.6E-43 5.7E-48 300.5 22.1 230 65-299 1-259 (277)
85 cd05597 STKc_DMPK_like Catalyt 100.0 7.2E-44 1.6E-48 311.4 18.9 241 57-299 1-271 (331)
86 cd07876 STKc_JNK2 Catalytic do 100.0 2.4E-43 5.1E-48 311.6 22.4 238 55-299 19-320 (359)
87 cd05575 STKc_SGK Catalytic dom 100.0 4.3E-44 9.4E-49 311.9 17.4 227 63-299 1-256 (323)
88 cd05630 STKc_GRK6 Catalytic do 100.0 2.1E-43 4.5E-48 302.4 21.1 236 58-299 1-266 (285)
89 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.5E-43 3.2E-48 310.5 20.4 232 55-293 5-329 (338)
90 cd05621 STKc_ROCK2 Catalytic d 100.0 6.2E-44 1.3E-48 315.9 18.1 240 54-299 40-309 (370)
91 cd05601 STKc_CRIK Catalytic do 100.0 3E-44 6.6E-49 313.8 15.9 237 57-299 1-268 (330)
92 cd08227 PK_STRAD_alpha Pseudok 100.0 1.4E-43 3E-48 309.2 19.9 236 61-299 2-312 (327)
93 cd05615 STKc_cPKC_alpha Cataly 100.0 1.6E-43 3.5E-48 308.2 19.6 232 58-299 1-262 (323)
94 cd06645 STKc_MAP4K3 Catalytic 100.0 2.1E-43 4.6E-48 299.3 19.8 237 56-296 8-267 (267)
95 cd05582 STKc_RSK_N N-terminal 100.0 2.8E-44 6.1E-49 312.4 14.5 227 63-299 2-259 (318)
96 cd07873 STKc_PCTAIRE1 Catalyti 100.0 7.2E-43 1.6E-47 301.3 23.1 240 55-299 4-291 (301)
97 cd06646 STKc_MAP4K5 Catalytic 100.0 3.2E-43 7E-48 298.2 20.3 241 54-296 6-267 (267)
98 cd07853 STKc_NLK Catalytic dom 100.0 2.4E-43 5.1E-48 313.0 19.9 238 58-299 1-293 (372)
99 cd06630 STKc_MEKK1 Catalytic d 100.0 5.5E-43 1.2E-47 296.8 20.6 236 58-298 1-268 (268)
100 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.3E-42 2.8E-47 294.4 22.8 231 58-297 1-267 (267)
101 KOG0599 Phosphorylase kinase g 100.0 2.3E-44 5E-49 288.1 11.0 241 55-298 15-287 (411)
102 KOG0589 Serine/threonine prote 100.0 1.2E-43 2.6E-48 306.9 16.3 235 56-298 3-262 (426)
103 cd05623 STKc_MRCK_alpha Cataly 100.0 2E-43 4.3E-48 308.8 17.9 242 57-300 1-272 (332)
104 PTZ00283 serine/threonine prot 100.0 1.2E-42 2.5E-47 317.8 23.7 236 55-298 30-301 (496)
105 cd06615 PKc_MEK Catalytic doma 100.0 1.3E-42 2.8E-47 300.7 22.4 237 57-299 1-292 (308)
106 cd05632 STKc_GRK5 Catalytic do 100.0 1.3E-42 2.8E-47 297.5 21.5 237 58-300 1-267 (285)
107 cd05622 STKc_ROCK1 Catalytic d 100.0 2.9E-43 6.3E-48 311.9 18.1 239 54-299 40-309 (371)
108 cd08223 STKc_Nek4 Catalytic do 100.0 5.3E-42 1.1E-46 289.0 24.8 232 58-297 1-257 (257)
109 cd06609 STKc_MST3_like Catalyt 100.0 1.6E-42 3.5E-47 295.1 21.7 234 57-300 1-257 (274)
110 PHA03209 serine/threonine kina 100.0 2.5E-42 5.3E-47 304.7 23.6 234 56-300 65-357 (357)
111 cd07875 STKc_JNK1 Catalytic do 100.0 1.2E-42 2.6E-47 307.6 21.4 238 55-299 22-323 (364)
112 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 7.5E-43 1.6E-47 298.9 19.5 240 57-299 1-267 (286)
113 cd07839 STKc_CDK5 Catalytic do 100.0 2.4E-42 5.3E-47 295.4 22.3 235 58-297 1-284 (284)
114 cd05624 STKc_MRCK_beta Catalyt 100.0 2.7E-43 5.8E-48 307.9 16.7 238 57-299 1-271 (331)
115 cd05603 STKc_SGK2 Catalytic do 100.0 3.1E-43 6.7E-48 306.3 17.0 227 63-299 1-256 (321)
116 cd05604 STKc_SGK3 Catalytic do 100.0 2.5E-43 5.5E-48 307.3 16.4 227 63-299 1-256 (325)
117 cd05574 STKc_phototropin_like 100.0 1.6E-42 3.5E-47 301.1 21.3 233 57-299 1-294 (316)
118 cd07874 STKc_JNK3 Catalytic do 100.0 1.1E-42 2.4E-47 307.0 20.4 237 55-298 15-315 (355)
119 cd06611 STKc_SLK_like Catalyti 100.0 1.2E-42 2.6E-47 296.7 20.0 239 55-299 3-267 (280)
120 KOG0193 Serine/threonine prote 100.0 9.7E-44 2.1E-48 311.4 13.4 234 50-293 385-648 (678)
121 cd05580 STKc_PKA Catalytic dom 100.0 2.6E-42 5.6E-47 296.3 21.7 234 57-300 1-260 (290)
122 PHA03390 pk1 serine/threonine- 100.0 5.2E-42 1.1E-46 291.0 23.3 234 57-299 14-267 (267)
123 cd05064 PTKc_EphR_A10 Catalyti 100.0 2.3E-42 5E-47 293.0 20.8 229 56-293 4-260 (266)
124 KOG0604 MAP kinase-activated p 100.0 2E-43 4.3E-48 285.9 13.4 238 55-299 59-327 (400)
125 cd06651 STKc_MEKK3 Catalytic d 100.0 6.9E-42 1.5E-46 290.0 23.5 233 58-298 3-265 (266)
126 cd08529 STKc_FA2-like Catalyti 100.0 8.9E-42 1.9E-46 287.4 24.1 231 58-297 1-256 (256)
127 cd07847 STKc_CDKL1_4 Catalytic 100.0 5.8E-42 1.2E-46 293.2 23.0 237 57-297 1-286 (286)
128 cd06631 STKc_YSK4 Catalytic do 100.0 5.9E-42 1.3E-46 290.2 22.6 232 58-297 1-265 (265)
129 cd05602 STKc_SGK1 Catalytic do 100.0 5.5E-43 1.2E-47 305.2 16.7 227 63-299 1-256 (325)
130 PF00069 Pkinase: Protein kina 100.0 2.2E-43 4.7E-48 297.8 13.5 234 59-297 1-260 (260)
131 cd07861 STKc_CDK1_euk Catalyti 100.0 7.3E-42 1.6E-46 292.5 23.2 235 58-297 1-285 (285)
132 cd06654 STKc_PAK1 Catalytic do 100.0 5.8E-42 1.3E-46 295.0 22.6 237 55-299 18-275 (296)
133 cd06655 STKc_PAK2 Catalytic do 100.0 6.5E-42 1.4E-46 294.6 22.7 237 55-299 17-274 (296)
134 cd06644 STKc_STK10_LOK Catalyt 100.0 5.1E-42 1.1E-46 294.7 22.0 242 52-299 7-274 (292)
135 cd06637 STKc_TNIK Catalytic do 100.0 3.8E-42 8.2E-47 292.4 20.9 239 55-297 4-272 (272)
136 KOG4717 Serine/threonine prote 100.0 7.3E-43 1.6E-47 300.8 16.5 237 51-299 14-275 (864)
137 cd06656 STKc_PAK3 Catalytic do 100.0 3.9E-42 8.6E-47 296.1 21.2 237 55-299 17-274 (297)
138 cd07841 STKc_CDK7 Catalytic do 100.0 4.5E-42 9.8E-47 295.8 21.1 238 58-300 1-288 (298)
139 cd06612 STKc_MST1_2 Catalytic 100.0 3.6E-42 7.8E-47 289.7 19.8 234 57-297 3-256 (256)
140 PHA03207 serine/threonine kina 100.0 2.2E-41 4.7E-46 302.2 25.8 234 57-299 92-380 (392)
141 cd06613 STKc_MAP4K3_like Catal 100.0 9.2E-42 2E-46 288.2 22.2 239 56-296 2-262 (262)
142 cd06652 STKc_MEKK2 Catalytic d 100.0 2.3E-41 4.9E-46 286.6 24.6 234 57-298 2-265 (265)
143 cd06619 PKc_MKK5 Catalytic dom 100.0 8.8E-42 1.9E-46 291.4 22.2 234 57-299 1-258 (279)
144 PHA03211 serine/threonine kina 100.0 1.7E-41 3.6E-46 306.2 25.1 234 56-299 168-460 (461)
145 cd07868 STKc_CDK8 Catalytic do 100.0 4.4E-42 9.5E-47 298.5 20.6 232 62-297 6-317 (317)
146 cd05586 STKc_Sck1_like Catalyt 100.0 6.2E-43 1.3E-47 305.5 15.2 226 65-299 1-258 (330)
147 cd06623 PKc_MAPKK_plant_like C 100.0 9.1E-42 2E-46 288.5 21.9 238 57-300 1-262 (264)
148 PTZ00267 NIMA-related protein 100.0 4E-42 8.8E-47 313.9 21.2 233 57-298 67-327 (478)
149 cd06605 PKc_MAPKK Catalytic do 100.0 5.6E-42 1.2E-46 290.1 20.1 238 57-299 1-262 (265)
150 cd07878 STKc_p38beta_MAPK11 Ca 100.0 2E-42 4.4E-47 303.9 17.6 239 56-299 14-303 (343)
151 cd05578 STKc_Yank1 Catalytic d 100.0 5E-42 1.1E-46 289.4 19.3 233 58-297 1-258 (258)
152 cd06643 STKc_SLK Catalytic dom 100.0 7.6E-42 1.7E-46 292.1 20.3 237 59-299 7-267 (282)
153 cd08218 STKc_Nek1 Catalytic do 100.0 2.1E-41 4.6E-46 285.2 22.6 231 58-297 1-256 (256)
154 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.7E-41 3.7E-46 287.2 22.0 233 57-297 1-267 (267)
155 PTZ00266 NIMA-related protein 100.0 1.3E-41 2.8E-46 322.3 23.4 240 54-299 10-300 (1021)
156 cd06626 STKc_MEKK4 Catalytic d 100.0 2.6E-41 5.7E-46 285.7 23.0 235 58-297 1-264 (264)
157 cd05633 STKc_GRK3 Catalytic do 100.0 2.8E-41 6.1E-46 288.3 23.2 230 64-299 1-260 (279)
158 KOG0577 Serine/threonine prote 100.0 3.1E-43 6.8E-48 307.2 11.2 239 53-298 22-282 (948)
159 cd05104 PTKc_Kit Catalytic dom 100.0 1E-41 2.2E-46 302.6 20.9 234 53-294 31-370 (375)
160 cd07844 STKc_PCTAIRE_like Cata 100.0 4.2E-41 9.2E-46 288.8 24.0 238 55-297 3-291 (291)
161 cd05609 STKc_MAST Catalytic do 100.0 2.5E-41 5.5E-46 292.2 22.7 234 57-299 1-278 (305)
162 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.7E-41 3.7E-46 290.3 21.4 239 56-299 4-271 (284)
163 cd06632 STKc_MEKK1_plant Catal 100.0 2.4E-41 5.1E-46 285.0 21.6 233 58-297 1-258 (258)
164 cd08220 STKc_Nek8 Catalytic do 100.0 4.8E-41 1E-45 282.9 23.4 231 58-297 1-256 (256)
165 cd05577 STKc_GRK Catalytic dom 100.0 2.4E-41 5.1E-46 288.4 21.7 229 65-299 1-259 (277)
166 cd06639 STKc_myosinIIIB Cataly 100.0 4.3E-41 9.2E-46 288.8 23.2 240 54-298 19-291 (291)
167 cd07860 STKc_CDK2_3 Catalytic 100.0 2.4E-41 5.1E-46 289.3 21.5 235 58-297 1-284 (284)
168 KOG0574 STE20-like serine/thre 100.0 1.7E-44 3.8E-49 292.6 1.9 234 58-300 34-289 (502)
169 KOG0607 MAP kinase-interacting 100.0 8.7E-43 1.9E-47 284.5 11.6 235 62-299 83-366 (463)
170 cd07845 STKc_CDK10 Catalytic d 100.0 3.6E-41 7.7E-46 291.8 22.5 242 54-299 4-295 (309)
171 cd07870 STKc_PFTAIRE2 Catalyti 100.0 5.4E-41 1.2E-45 288.2 23.4 237 56-297 4-291 (291)
172 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.8E-41 3.9E-46 289.8 20.4 239 54-297 13-282 (282)
173 cd05106 PTKc_CSF-1R Catalytic 100.0 9.8E-42 2.1E-46 302.4 19.4 235 51-293 32-367 (374)
174 cd06638 STKc_myosinIIIA Cataly 100.0 3.6E-41 7.8E-46 288.4 22.0 243 50-297 11-286 (286)
175 KOG2345 Serine/threonine prote 100.0 9E-43 2E-47 275.2 10.9 241 50-294 14-296 (302)
176 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.6E-41 3.6E-46 290.5 19.6 237 57-297 1-286 (286)
177 KOG0579 Ste20-like serine/thre 100.0 5.6E-43 1.2E-47 307.9 10.1 242 53-300 28-295 (1187)
178 cd06640 STKc_MST4 Catalytic do 100.0 2.7E-41 5.9E-46 288.0 20.3 233 57-299 4-258 (277)
179 PHA02988 hypothetical protein; 100.0 4.4E-41 9.4E-46 287.6 21.6 223 63-293 26-274 (283)
180 cd06629 STKc_MAPKKK_Bck1_like 100.0 3.6E-41 7.7E-46 286.4 21.0 234 58-297 2-272 (272)
181 cd05061 PTKc_InsR Catalytic do 100.0 6.6E-41 1.4E-45 287.3 22.7 237 55-300 4-286 (288)
182 cd08225 STKc_Nek5 Catalytic do 100.0 5.6E-41 1.2E-45 282.6 21.9 231 58-297 1-257 (257)
183 cd07867 STKc_CDC2L6 Catalytic 100.0 5.6E-41 1.2E-45 291.5 22.2 232 62-297 6-317 (317)
184 cd07837 STKc_CdkB_plant Cataly 100.0 5.3E-41 1.2E-45 288.7 21.8 238 57-298 1-295 (295)
185 cd08221 STKc_Nek9 Catalytic do 100.0 1.6E-40 3.4E-45 279.9 24.3 231 58-297 1-256 (256)
186 cd07833 STKc_CDKL Catalytic do 100.0 5.1E-41 1.1E-45 287.6 21.5 235 57-297 1-288 (288)
187 cd07832 STKc_CCRK Catalytic do 100.0 5.9E-41 1.3E-45 287.0 21.7 236 58-298 1-286 (286)
188 cd05572 STKc_cGK_PKG Catalytic 100.0 4.9E-41 1.1E-45 284.0 21.0 228 65-299 1-257 (262)
189 cd07843 STKc_CDC2L1 Catalytic 100.0 5.6E-41 1.2E-45 288.4 21.6 239 55-297 3-293 (293)
190 KOG0612 Rho-associated, coiled 100.0 5.1E-43 1.1E-47 324.7 9.4 240 55-300 73-344 (1317)
191 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.1E-41 2.3E-46 290.5 16.9 232 57-298 4-257 (277)
192 cd06608 STKc_myosinIII_like Ca 100.0 4E-41 8.7E-46 286.1 20.3 238 55-297 4-275 (275)
193 cd08226 PK_STRAD_beta Pseudoki 100.0 1E-41 2.2E-46 297.7 16.4 234 63-299 4-313 (328)
194 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2.1E-40 4.6E-45 284.0 24.3 239 57-299 1-271 (287)
195 KOG0662 Cyclin-dependent kinas 100.0 2.8E-41 6E-46 255.3 16.2 238 57-299 2-288 (292)
196 cd06641 STKc_MST3 Catalytic do 100.0 7.3E-41 1.6E-45 285.4 21.0 232 58-299 5-258 (277)
197 cd05048 PTKc_Ror Catalytic Dom 100.0 4.4E-41 9.6E-46 287.5 19.6 230 56-294 4-279 (283)
198 cd06617 PKc_MKK3_6 Catalytic d 100.0 9.7E-41 2.1E-45 285.3 21.7 237 57-299 1-266 (283)
199 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.7E-40 3.7E-45 279.9 22.7 228 56-293 3-253 (256)
200 cd06917 STKc_NAK1_like Catalyt 100.0 8.5E-41 1.8E-45 284.8 21.1 233 58-299 2-260 (277)
201 cd06624 STKc_ASK Catalytic dom 100.0 1.4E-40 2.9E-45 282.3 22.2 236 57-297 8-268 (268)
202 cd07836 STKc_Pho85 Catalytic d 100.0 1.9E-40 4.1E-45 283.6 23.1 235 58-297 1-284 (284)
203 KOG4721 Serine/threonine prote 100.0 2.2E-42 4.7E-47 300.8 10.9 224 55-294 122-364 (904)
204 cd06607 STKc_TAO Catalytic dom 100.0 7.5E-41 1.6E-45 289.5 20.4 238 55-299 13-272 (307)
205 cd07865 STKc_CDK9 Catalytic do 100.0 1.6E-40 3.4E-45 287.5 22.3 239 54-297 9-310 (310)
206 cd08217 STKc_Nek2 Catalytic do 100.0 2.9E-40 6.2E-45 279.2 23.3 232 58-297 1-265 (265)
207 cd05611 STKc_Rim15_like Cataly 100.0 8.9E-41 1.9E-45 282.1 20.1 232 63-300 2-257 (260)
208 cd06606 STKc_MAPKKK Catalytic 100.0 2.5E-40 5.5E-45 278.4 22.7 233 58-297 1-260 (260)
209 cd05054 PTKc_VEGFR Catalytic d 100.0 5.5E-41 1.2E-45 293.8 19.1 234 54-294 4-329 (337)
210 PTZ00024 cyclin-dependent prot 100.0 1.7E-40 3.8E-45 290.7 22.3 238 57-299 8-318 (335)
211 KOG1026 Nerve growth factor re 100.0 1.3E-41 2.7E-46 309.3 15.4 230 54-292 483-756 (774)
212 cd06647 STKc_PAK_I Catalytic d 100.0 7.6E-41 1.6E-45 287.6 19.2 236 56-299 18-274 (293)
213 cd05096 PTKc_DDR1 Catalytic do 100.0 2.1E-40 4.5E-45 286.3 21.8 231 56-292 4-299 (304)
214 cd05052 PTKc_Abl Catalytic dom 100.0 2.6E-40 5.6E-45 279.9 21.9 230 56-294 5-258 (263)
215 cd05082 PTKc_Csk Catalytic dom 100.0 2.8E-40 6.1E-45 278.5 22.0 229 55-293 4-251 (256)
216 KOG4279 Serine/threonine prote 100.0 5.7E-42 1.2E-46 304.1 12.0 232 63-299 581-837 (1226)
217 PLN00009 cyclin-dependent kina 100.0 3.2E-40 6.9E-45 283.8 22.4 239 57-300 2-290 (294)
218 cd05084 PTKc_Fes Catalytic dom 100.0 1.9E-40 4.1E-45 278.9 20.5 222 63-293 1-248 (252)
219 cd05606 STKc_beta_ARK Catalyti 100.0 4.8E-40 1E-44 280.6 23.3 230 64-299 1-260 (278)
220 cd06648 STKc_PAK_II Catalytic 100.0 2.4E-40 5.1E-45 283.5 21.4 232 58-299 20-274 (285)
221 cd05581 STKc_PDK1 Catalytic do 100.0 1.4E-40 3E-45 283.6 19.7 231 57-297 1-280 (280)
222 cd06614 STKc_PAK Catalytic dom 100.0 2.3E-40 5E-45 283.6 21.0 237 54-299 16-275 (286)
223 cd05049 PTKc_Trk Catalytic dom 100.0 1.5E-40 3.2E-45 283.7 19.7 229 56-293 4-276 (280)
224 KOG4645 MAPKKK (MAP kinase kin 100.0 1.1E-42 2.4E-47 326.2 7.1 236 58-298 1236-1498(1509)
225 cd08219 STKc_Nek3 Catalytic do 100.0 4.5E-40 9.8E-45 277.1 22.1 228 58-294 1-252 (255)
226 cd07866 STKc_BUR1 Catalytic do 100.0 2.9E-40 6.2E-45 286.0 21.4 237 56-297 7-311 (311)
227 cd06658 STKc_PAK5 Catalytic do 100.0 5.2E-41 1.1E-45 288.5 16.6 233 57-299 22-277 (292)
228 cd07855 STKc_ERK5 Catalytic do 100.0 7.6E-41 1.6E-45 292.8 17.9 239 57-299 5-299 (334)
229 cd05579 STKc_MAST_like Catalyt 100.0 8.2E-41 1.8E-45 282.5 17.5 226 65-300 1-263 (265)
230 cd05090 PTKc_Ror1 Catalytic do 100.0 2.8E-40 6E-45 282.7 20.9 230 56-294 4-279 (283)
231 cd07831 STKc_MOK Catalytic dom 100.0 1.7E-40 3.6E-45 283.6 19.5 234 59-297 1-282 (282)
232 cd08228 STKc_Nek6 Catalytic do 100.0 6.8E-40 1.5E-44 277.7 23.1 232 56-294 1-261 (267)
233 cd05113 PTKc_Btk_Bmx Catalytic 100.0 3.5E-40 7.5E-45 278.1 20.7 229 56-294 3-254 (256)
234 KOG0690 Serine/threonine prote 100.0 4.4E-42 9.5E-47 281.2 8.8 237 54-300 165-430 (516)
235 cd08215 STKc_Nek Catalytic dom 100.0 5E-40 1.1E-44 276.5 21.6 231 58-297 1-258 (258)
236 cd07835 STKc_CDK1_like Catalyt 100.0 4.3E-40 9.4E-45 281.4 21.4 234 59-297 1-283 (283)
237 cd05036 PTKc_ALK_LTK Catalytic 100.0 3.6E-40 7.7E-45 281.2 20.8 230 56-294 5-274 (277)
238 cd07849 STKc_ERK1_2_like Catal 100.0 1.6E-40 3.6E-45 290.9 19.2 237 57-299 5-297 (336)
239 cd05103 PTKc_VEGFR2 Catalytic 100.0 2.4E-40 5.2E-45 290.6 20.2 234 54-294 4-335 (343)
240 cd07858 STKc_TEY_MAPK_plant Ca 100.0 2.3E-40 4.9E-45 290.1 20.0 239 57-299 5-296 (337)
241 cd05088 PTKc_Tie2 Catalytic do 100.0 2.3E-40 5.1E-45 285.9 19.8 231 55-294 5-276 (303)
242 cd06627 STKc_Cdc7_like Catalyt 100.0 7.6E-40 1.7E-44 275.0 22.2 231 58-297 1-254 (254)
243 cd07842 STKc_CDK8_like Catalyt 100.0 5.7E-40 1.2E-44 284.9 21.9 236 58-297 1-316 (316)
244 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.9E-39 4.2E-44 274.7 24.6 233 57-297 2-264 (264)
245 cd05089 PTKc_Tie1 Catalytic do 100.0 5.4E-40 1.2E-44 282.9 21.5 230 56-294 1-271 (297)
246 cd05059 PTKc_Tec_like Catalyti 100.0 4.8E-40 1.1E-44 277.1 20.7 228 57-294 4-254 (256)
247 cd05062 PTKc_IGF-1R Catalytic 100.0 6.1E-40 1.3E-44 279.7 21.4 231 55-294 4-274 (277)
248 cd06635 STKc_TAO1 Catalytic do 100.0 9.5E-40 2.1E-44 283.9 23.0 236 57-298 25-281 (317)
249 cd07850 STKc_JNK Catalytic dom 100.0 3.4E-40 7.3E-45 290.8 20.3 236 56-298 15-315 (353)
250 KOG1989 ARK protein kinase fam 100.0 9.6E-41 2.1E-45 304.6 17.3 230 55-294 35-307 (738)
251 KOG4236 Serine/threonine prote 100.0 6.7E-42 1.5E-46 295.5 9.0 233 59-299 564-824 (888)
252 cd06633 STKc_TAO3 Catalytic do 100.0 6.1E-40 1.3E-44 284.6 21.4 236 57-299 21-278 (313)
253 cd05105 PTKc_PDGFR_alpha Catal 100.0 4.3E-40 9.3E-45 293.4 20.5 235 51-293 31-392 (400)
254 cd06659 STKc_PAK6 Catalytic do 100.0 3.2E-40 6.9E-45 284.3 18.9 234 56-299 20-276 (297)
255 KOG0586 Serine/threonine prote 100.0 7.4E-41 1.6E-45 294.3 15.0 236 55-299 54-311 (596)
256 cd07864 STKc_CDK12 Catalytic d 100.0 1.1E-39 2.4E-44 281.4 22.0 237 56-297 6-302 (302)
257 cd05033 PTKc_EphR Catalytic do 100.0 1.1E-39 2.3E-44 276.5 21.5 230 56-294 3-261 (266)
258 cd05039 PTKc_Csk_like Catalyti 100.0 1.8E-39 3.8E-44 273.6 22.5 228 55-293 4-251 (256)
259 cd06616 PKc_MKK4 Catalytic dom 100.0 4.6E-40 1E-44 281.9 19.2 237 57-299 4-272 (288)
260 cd05068 PTKc_Frk_like Catalyti 100.0 1.9E-39 4.2E-44 274.2 22.7 229 55-293 4-256 (261)
261 KOG0596 Dual specificity; seri 100.0 1E-40 2.2E-45 289.5 15.0 238 54-298 358-631 (677)
262 cd07834 STKc_MAPK Catalytic do 100.0 3.3E-40 7.2E-45 288.3 18.1 237 58-299 1-294 (330)
263 cd05072 PTKc_Lyn Catalytic dom 100.0 9.7E-40 2.1E-44 276.0 20.3 229 55-293 4-256 (261)
264 cd07854 STKc_MAPK4_6 Catalytic 100.0 6.9E-40 1.5E-44 287.6 20.1 239 56-299 4-305 (342)
265 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 4.7E-39 1E-43 272.4 24.4 230 57-293 2-260 (267)
266 cd05122 PKc_STE Catalytic doma 100.0 2.2E-39 4.8E-44 271.5 21.9 230 58-296 1-253 (253)
267 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.6E-39 3.4E-44 278.0 21.3 231 58-293 4-276 (283)
268 KOG0666 Cyclin C-dependent kin 100.0 5E-41 1.1E-45 273.3 11.3 243 53-299 20-342 (438)
269 cd05093 PTKc_TrkB Catalytic do 100.0 1.2E-39 2.5E-44 279.5 20.3 229 56-293 4-274 (288)
270 cd05094 PTKc_TrkC Catalytic do 100.0 1E-39 2.3E-44 280.2 19.9 229 56-293 4-277 (291)
271 cd05576 STKc_RPK118_like Catal 100.0 9.2E-40 2E-44 272.4 18.9 213 68-297 4-237 (237)
272 cd05148 PTKc_Srm_Brk Catalytic 100.0 6.2E-40 1.3E-44 277.1 18.0 229 55-293 4-256 (261)
273 cd05046 PTK_CCK4 Pseudokinase 100.0 1.6E-39 3.4E-44 276.8 20.6 230 56-294 4-272 (275)
274 cd05032 PTKc_InsR_like Catalyt 100.0 1.9E-39 4.2E-44 276.4 20.8 230 55-293 4-273 (277)
275 cd05613 STKc_MSK1_N N-terminal 100.0 3.4E-39 7.4E-44 276.9 22.5 239 58-300 1-274 (290)
276 cd08530 STKc_CNK2-like Catalyt 100.0 3.2E-39 7E-44 271.7 21.7 231 58-297 1-256 (256)
277 cd05071 PTKc_Src Catalytic dom 100.0 2.4E-39 5.3E-44 273.8 21.0 228 55-293 4-255 (262)
278 cd05116 PTKc_Syk Catalytic dom 100.0 2.4E-39 5.3E-44 273.0 20.9 220 64-293 2-250 (257)
279 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 2.9E-39 6.4E-44 272.9 21.4 227 55-292 4-254 (260)
280 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 5.5E-39 1.2E-43 280.3 23.6 244 51-299 4-293 (328)
281 KOG0986 G protein-coupled rece 100.0 6.2E-41 1.3E-45 284.8 10.9 240 55-300 183-452 (591)
282 KOG0603 Ribosomal protein S6 k 100.0 6.2E-40 1.4E-44 289.8 17.7 229 55-297 320-566 (612)
283 cd05035 PTKc_Axl_like Catalyti 100.0 2.3E-39 5E-44 275.2 20.5 228 59-294 1-268 (273)
284 cd05091 PTKc_Ror2 Catalytic do 100.0 1.2E-39 2.7E-44 278.6 18.9 231 55-294 3-279 (283)
285 PF07714 Pkinase_Tyr: Protein 100.0 4.1E-40 9E-45 278.1 15.6 225 60-293 2-257 (259)
286 cd05108 PTKc_EGFR Catalytic do 100.0 2.1E-39 4.5E-44 281.6 20.4 229 56-294 6-264 (316)
287 cd08216 PK_STRAD Pseudokinase 100.0 1.3E-39 2.8E-44 282.6 19.0 228 69-299 12-300 (314)
288 cd07840 STKc_CDK9_like Catalyt 100.0 6.1E-39 1.3E-43 274.4 22.8 235 59-297 1-287 (287)
289 cd05053 PTKc_FGFR Catalytic do 100.0 2E-39 4.3E-44 278.6 19.8 233 53-294 8-287 (293)
290 KOG0671 LAMMER dual specificit 100.0 7.2E-41 1.6E-45 279.1 10.3 237 56-299 88-411 (415)
291 cd05034 PTKc_Src_like Catalyti 100.0 6E-39 1.3E-43 271.1 22.2 229 55-293 4-256 (261)
292 cd05055 PTKc_PDGFR Catalytic d 100.0 3.9E-39 8.4E-44 278.2 21.5 232 54-293 32-296 (302)
293 cd05583 STKc_MSK_N N-terminal 100.0 2.8E-39 6.2E-44 277.1 20.5 239 58-300 1-272 (288)
294 cd08222 STKc_Nek11 Catalytic d 100.0 2.2E-39 4.7E-44 273.7 19.4 230 58-297 1-260 (260)
295 cd05118 STKc_CMGC Catalytic do 100.0 1.6E-39 3.4E-44 277.6 18.8 234 59-297 1-283 (283)
296 cd05092 PTKc_TrkA Catalytic do 100.0 2.3E-39 4.9E-44 276.7 19.6 230 55-293 3-276 (280)
297 PHA03210 serine/threonine kina 100.0 7.8E-40 1.7E-44 300.0 17.9 238 56-299 147-459 (501)
298 cd05060 PTKc_Syk_like Catalyti 100.0 5.5E-39 1.2E-43 270.8 21.4 221 63-293 1-250 (257)
299 cd06634 STKc_TAO2 Catalytic do 100.0 3.2E-39 7E-44 279.4 20.4 237 56-299 14-272 (308)
300 cd05065 PTKc_EphR_B Catalytic 100.0 3.7E-39 8E-44 273.7 20.3 229 56-293 3-263 (269)
301 cd05067 PTKc_Lck_Blk Catalytic 100.0 5.1E-39 1.1E-43 271.5 21.0 228 55-293 4-255 (260)
302 cd08229 STKc_Nek7 Catalytic do 100.0 4.1E-39 8.9E-44 273.0 20.4 230 57-293 2-260 (267)
303 KOG0194 Protein tyrosine kinas 100.0 2.5E-40 5.4E-45 291.4 13.3 230 55-293 155-415 (474)
304 cd05098 PTKc_FGFR1 Catalytic d 100.0 6.7E-39 1.5E-43 277.3 22.0 231 55-294 16-295 (307)
305 cd05107 PTKc_PDGFR_beta Cataly 100.0 4.1E-39 8.8E-44 287.1 21.0 233 54-294 34-395 (401)
306 cd06657 STKc_PAK4 Catalytic do 100.0 3.7E-39 8.1E-44 276.9 20.0 231 59-299 22-275 (292)
307 cd06618 PKc_MKK7 Catalytic dom 100.0 5.2E-39 1.1E-43 276.6 20.9 240 54-299 12-278 (296)
308 cd05123 STKc_AGC Catalytic dom 100.0 5.6E-39 1.2E-43 269.4 20.5 223 65-297 1-250 (250)
309 cd05050 PTKc_Musk Catalytic do 100.0 3.6E-39 7.7E-44 276.5 19.7 230 55-293 3-284 (288)
310 cd07838 STKc_CDK4_6_like Catal 100.0 8.5E-39 1.8E-43 273.7 21.9 234 59-297 1-287 (287)
311 cd05066 PTKc_EphR_A Catalytic 100.0 5.9E-39 1.3E-43 272.1 20.5 229 56-293 3-261 (267)
312 cd05063 PTKc_EphR_A2 Catalytic 100.0 9.7E-39 2.1E-43 270.9 21.7 229 56-293 4-262 (268)
313 cd05111 PTK_HER3 Pseudokinase 100.0 8.1E-39 1.8E-43 273.1 21.4 229 55-293 5-263 (279)
314 cd07879 STKc_p38delta_MAPK13 C 100.0 4.4E-39 9.5E-44 282.5 20.0 238 56-299 14-302 (342)
315 cd05051 PTKc_DDR Catalytic dom 100.0 6.1E-39 1.3E-43 276.0 20.5 233 56-293 4-292 (296)
316 cd05109 PTKc_HER2 Catalytic do 100.0 8.2E-39 1.8E-43 273.0 21.1 229 55-293 5-263 (279)
317 cd05069 PTKc_Yes Catalytic dom 100.0 1.4E-38 3E-43 268.9 22.2 227 56-293 5-255 (260)
318 cd05115 PTKc_Zap-70 Catalytic 100.0 9.7E-39 2.1E-43 269.4 21.2 220 64-293 2-250 (257)
319 cd07880 STKc_p38gamma_MAPK12 C 100.0 4.1E-39 9E-44 282.8 19.6 239 56-299 14-303 (343)
320 cd05075 PTKc_Axl Catalytic dom 100.0 7.2E-39 1.6E-43 272.2 20.5 227 60-294 2-267 (272)
321 cd07852 STKc_MAPK15 Catalytic 100.0 3.1E-39 6.7E-44 283.0 18.7 239 56-299 6-300 (337)
322 cd07877 STKc_p38alpha_MAPK14 C 100.0 6E-39 1.3E-43 281.9 20.5 240 55-299 15-305 (345)
323 cd07829 STKc_CDK_like Catalyti 100.0 3.3E-39 7.1E-44 275.5 18.3 234 59-297 1-282 (282)
324 cd05045 PTKc_RET Catalytic dom 100.0 7.9E-39 1.7E-43 274.6 20.7 227 58-293 1-281 (290)
325 KOG0983 Mitogen-activated prot 100.0 4.1E-39 8.8E-44 258.0 17.3 237 56-298 91-353 (391)
326 cd05047 PTKc_Tie Catalytic dom 100.0 4.7E-39 1E-43 273.3 18.8 222 63-293 1-263 (270)
327 cd05112 PTKc_Itk Catalytic dom 100.0 2.2E-38 4.9E-43 266.8 22.8 229 56-294 3-254 (256)
328 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.4E-38 3E-43 272.3 21.7 233 57-293 4-278 (284)
329 cd05083 PTKc_Chk Catalytic dom 100.0 9.3E-39 2E-43 269.0 20.1 227 55-293 4-249 (254)
330 KOG1095 Protein tyrosine kinas 100.0 2.9E-39 6.4E-44 303.5 18.6 229 56-293 691-956 (1025)
331 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.1E-38 2.3E-43 273.0 20.5 233 58-294 5-279 (284)
332 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.8E-38 3.9E-43 275.5 22.0 231 54-293 9-288 (314)
333 cd00192 PTKc Catalytic domain 100.0 1.7E-38 3.6E-43 267.9 21.2 223 63-294 1-260 (262)
334 cd07851 STKc_p38 Catalytic dom 100.0 3.9E-39 8.6E-44 282.9 18.0 240 55-299 13-303 (343)
335 PRK13184 pknD serine/threonine 100.0 1.1E-38 2.4E-43 301.1 22.1 228 56-292 1-283 (932)
336 cd05043 PTK_Ryk Pseudokinase d 100.0 1.9E-38 4.1E-43 270.9 21.3 231 55-293 4-271 (280)
337 cd07830 STKc_MAK_like Catalyti 100.0 1.4E-38 3E-43 272.0 20.1 234 59-297 1-283 (283)
338 cd05097 PTKc_DDR_like Catalyti 100.0 1.1E-38 2.5E-43 274.3 19.7 233 56-293 4-291 (295)
339 cd05100 PTKc_FGFR3 Catalytic d 100.0 3E-38 6.4E-43 276.5 21.6 230 56-294 11-289 (334)
340 cd05101 PTKc_FGFR2 Catalytic d 100.0 3.1E-38 6.6E-43 272.8 21.2 231 55-294 13-292 (304)
341 cd05057 PTKc_EGFR_like Catalyt 100.0 4.4E-38 9.6E-43 268.5 21.8 229 55-293 5-263 (279)
342 cd07857 STKc_MPK1 Catalytic do 100.0 3E-38 6.6E-43 276.2 21.1 238 58-299 1-297 (332)
343 cd05041 PTKc_Fes_like Catalyti 100.0 4.1E-38 8.8E-43 264.5 20.9 221 63-293 1-247 (251)
344 cd05095 PTKc_DDR2 Catalytic do 100.0 2.8E-38 6E-43 272.1 20.3 233 56-293 4-292 (296)
345 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 5.6E-39 1.2E-43 271.0 15.6 222 63-294 1-256 (258)
346 cd05056 PTKc_FAK Catalytic dom 100.0 3.6E-38 7.7E-43 267.7 20.3 228 57-294 6-261 (270)
347 cd05058 PTKc_Met_Ron Catalytic 100.0 6.2E-38 1.3E-42 265.0 21.7 224 63-294 1-255 (262)
348 KOG0696 Serine/threonine prote 100.0 3.2E-39 7E-44 271.9 13.2 237 54-300 346-612 (683)
349 KOG1187 Serine/threonine prote 100.0 2.8E-38 6.1E-43 276.0 19.5 240 49-293 67-347 (361)
350 cd05073 PTKc_Hck Catalytic dom 100.0 6.8E-38 1.5E-42 264.6 21.1 228 55-293 4-255 (260)
351 cd05040 PTKc_Ack_like Catalyti 100.0 3.8E-38 8.2E-43 265.6 19.3 222 63-293 1-253 (257)
352 cd05085 PTKc_Fer Catalytic dom 100.0 9.4E-38 2E-42 262.1 21.5 222 63-294 1-247 (250)
353 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 3.4E-38 7.3E-43 268.6 18.8 221 64-294 2-272 (274)
354 cd05044 PTKc_c-ros Catalytic d 100.0 4E-38 8.6E-43 267.2 18.9 222 63-293 1-265 (269)
355 smart00219 TyrKc Tyrosine kina 100.0 6.5E-38 1.4E-42 263.9 20.1 226 59-293 1-256 (258)
356 cd05042 PTKc_Aatyk Catalytic d 100.0 4.9E-38 1.1E-42 266.7 19.4 228 63-293 1-265 (269)
357 KOG0669 Cyclin T-dependent kin 100.0 3.3E-40 7.2E-45 261.5 5.0 242 53-299 13-320 (376)
358 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 6.8E-38 1.5E-42 264.1 19.3 221 63-293 1-256 (259)
359 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 9.6E-38 2.1E-42 265.0 20.3 228 63-293 1-265 (269)
360 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 7.3E-38 1.6E-42 267.5 19.3 233 57-293 4-278 (284)
361 cd05610 STKc_MASTL Catalytic d 100.0 1.1E-37 2.5E-42 294.1 21.1 133 56-189 3-140 (669)
362 KOG0584 Serine/threonine prote 100.0 1.1E-38 2.5E-43 280.9 12.6 236 55-299 37-301 (632)
363 KOG1094 Discoidin domain recep 100.0 6.6E-38 1.4E-42 273.5 16.9 233 55-293 536-799 (807)
364 KOG1035 eIF-2alpha kinase GCN2 100.0 1.2E-38 2.7E-43 297.7 13.0 236 56-298 478-875 (1351)
365 cd05110 PTKc_HER4 Catalytic do 100.0 3.5E-37 7.5E-42 266.1 21.0 230 55-294 5-264 (303)
366 KOG4278 Protein tyrosine kinas 100.0 7.6E-38 1.7E-42 275.1 16.1 229 55-292 265-517 (1157)
367 cd08528 STKc_Nek10 Catalytic d 100.0 9.3E-37 2E-41 258.9 22.0 228 58-294 1-266 (269)
368 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 5.8E-37 1.3E-41 259.3 20.6 222 63-294 1-260 (262)
369 KOG0695 Serine/threonine prote 100.0 1.4E-37 3E-42 256.1 16.2 242 54-300 247-522 (593)
370 KOG1151 Tousled-like protein k 100.0 8.4E-39 1.8E-43 271.6 8.9 240 57-298 463-745 (775)
371 KOG0199 ACK and related non-re 100.0 2.8E-38 6.1E-43 280.7 12.3 233 53-295 106-369 (1039)
372 cd05074 PTKc_Tyro3 Catalytic d 100.0 5.4E-37 1.2E-41 260.8 19.7 228 59-294 1-268 (273)
373 cd05086 PTKc_Aatyk2 Catalytic 100.0 1E-36 2.2E-41 258.7 20.5 228 63-293 1-264 (268)
374 KOG0668 Casein kinase II, alph 100.0 6.1E-38 1.3E-42 245.5 11.7 238 54-298 35-326 (338)
375 KOG1290 Serine/threonine prote 100.0 2.3E-36 5E-41 259.0 21.6 132 55-187 76-222 (590)
376 KOG0196 Tyrosine kinase, EPH ( 100.0 1.7E-38 3.7E-43 285.1 8.3 230 56-294 628-887 (996)
377 PHA02882 putative serine/threo 100.0 5.2E-36 1.1E-40 257.7 21.2 230 57-293 12-291 (294)
378 KOG4250 TANK binding protein k 100.0 1.5E-37 3.3E-42 277.2 11.4 225 59-286 15-296 (732)
379 KOG0587 Traf2- and Nck-interac 100.0 2E-36 4.3E-41 275.1 17.9 242 53-299 15-287 (953)
380 KOG0614 cGMP-dependent protein 100.0 5.2E-38 1.1E-42 270.3 5.9 237 55-299 418-682 (732)
381 PLN00113 leucine-rich repeat r 100.0 4.9E-36 1.1E-40 295.9 20.5 227 58-294 691-947 (968)
382 PLN03225 Serine/threonine-prot 100.0 3.9E-36 8.4E-41 277.5 17.5 237 55-299 130-455 (566)
383 KOG4257 Focal adhesion tyrosin 100.0 2.7E-36 5.9E-41 265.3 15.5 223 60-292 392-643 (974)
384 KOG0608 Warts/lats-like serine 100.0 1.6E-36 3.5E-41 267.1 14.0 235 59-300 631-934 (1034)
385 PLN03224 probable serine/threo 100.0 7.1E-35 1.5E-39 263.3 21.4 244 55-299 143-505 (507)
386 KOG1006 Mitogen-activated prot 100.0 5.5E-37 1.2E-41 244.8 4.6 236 56-298 63-331 (361)
387 smart00220 S_TKc Serine/Threon 100.0 2E-34 4.3E-39 239.9 19.5 220 69-297 1-244 (244)
388 KOG0670 U4/U6-associated splic 100.0 2.6E-36 5.5E-41 260.5 7.8 236 57-299 432-751 (752)
389 KOG0665 Jun-N-terminal kinase 100.0 1.2E-34 2.6E-39 236.9 11.4 235 56-298 16-314 (369)
390 KOG2052 Activin A type IB rece 100.0 7.5E-34 1.6E-38 241.3 16.6 232 57-292 211-497 (513)
391 KOG0200 Fibroblast/platelet-de 100.0 4.9E-33 1.1E-37 259.3 18.8 231 55-293 294-574 (609)
392 KOG0576 Mitogen-activated prot 100.0 9.1E-35 2E-39 257.3 5.4 241 54-298 12-275 (829)
393 KOG1024 Receptor-like protein 100.0 3.9E-33 8.5E-38 233.6 11.5 231 55-293 282-550 (563)
394 KOG1025 Epidermal growth facto 100.0 5.1E-33 1.1E-37 251.2 12.7 227 59-292 698-951 (1177)
395 KOG1167 Serine/threonine prote 100.0 8.6E-33 1.9E-37 233.6 11.4 236 57-299 36-386 (418)
396 KOG0664 Nemo-like MAPK-related 100.0 3.8E-34 8.3E-39 229.7 3.1 236 59-299 55-348 (449)
397 KOG1027 Serine/threonine prote 100.0 4.7E-33 1E-37 252.1 6.4 225 61-298 513-771 (903)
398 KOG1152 Signal transduction se 100.0 1.2E-31 2.6E-36 234.3 10.1 186 51-239 555-771 (772)
399 KOG3653 Transforming growth fa 100.0 7.6E-31 1.6E-35 224.6 13.3 232 55-291 208-496 (534)
400 KOG0984 Mitogen-activated prot 100.0 2.9E-30 6.2E-35 199.4 14.2 203 56-263 45-275 (282)
401 cd00180 PKc Catalytic domain o 100.0 3E-29 6.6E-34 203.8 18.8 190 65-295 1-215 (215)
402 KOG1345 Serine/threonine kinas 100.0 3.7E-30 7.9E-35 206.5 5.1 242 54-297 21-290 (378)
403 PLN00181 protein SPA1-RELATED; 100.0 1.8E-29 4E-34 243.6 10.7 182 107-299 27-270 (793)
404 smart00221 STYKc Protein kinas 100.0 8.8E-28 1.9E-32 197.8 16.5 178 59-239 1-202 (225)
405 smart00750 KIND kinase non-cat 99.9 1.2E-26 2.5E-31 184.5 11.7 151 138-298 1-169 (176)
406 KOG1164 Casein kinase (serine/ 99.9 1.1E-23 2.4E-28 183.0 22.3 233 58-292 19-291 (322)
407 KOG1163 Casein kinase (serine/ 99.9 1.1E-24 2.4E-29 172.3 13.3 186 54-241 12-225 (341)
408 KOG0590 Checkpoint kinase and 99.9 1.2E-26 2.7E-31 214.2 1.8 235 61-300 322-591 (601)
409 KOG0195 Integrin-linked kinase 99.9 3.6E-25 7.7E-30 178.2 8.0 230 56-292 189-440 (448)
410 KOG4158 BRPK/PTEN-induced prot 99.9 6.2E-24 1.3E-28 179.2 13.5 174 110-289 274-505 (598)
411 KOG1165 Casein kinase (serine/ 99.9 3.9E-23 8.3E-28 170.6 16.2 182 58-241 29-240 (449)
412 KOG1240 Protein kinase contain 99.9 4.2E-25 9.2E-30 205.8 5.1 220 58-294 24-291 (1431)
413 COG0515 SPS1 Serine/threonine 99.9 3.7E-22 8.1E-27 172.8 22.0 235 59-298 2-279 (384)
414 PRK10359 lipopolysaccharide co 99.9 2.5E-23 5.3E-28 169.0 9.5 166 56-231 30-216 (232)
415 cd05147 RIO1_euk RIO kinase fa 99.9 1.1E-22 2.3E-27 163.1 10.6 123 62-188 2-153 (190)
416 PRK09188 serine/threonine prot 99.9 9E-23 2E-27 177.6 11.0 124 56-191 17-150 (365)
417 KOG0603 Ribosomal protein S6 k 99.9 1.3E-23 2.7E-28 186.8 5.2 220 64-299 1-248 (612)
418 PF14531 Kinase-like: Kinase-l 99.9 5.7E-22 1.2E-26 165.7 9.9 215 58-285 13-288 (288)
419 cd05145 RIO1_like RIO kinase f 99.9 1.6E-21 3.4E-26 156.8 11.7 122 62-187 2-152 (190)
420 PRK10345 hypothetical protein; 99.9 7.2E-21 1.6E-25 154.0 11.8 123 61-189 6-141 (210)
421 KOG0606 Microtubule-associated 99.8 3.4E-21 7.4E-26 179.7 10.0 202 56-299 82-320 (1205)
422 PRK12274 serine/threonine prot 99.8 3.4E-19 7.3E-24 142.0 13.5 168 60-241 5-211 (218)
423 KOG1166 Mitotic checkpoint ser 99.8 9.8E-20 2.1E-24 172.4 12.1 179 55-236 696-902 (974)
424 smart00090 RIO RIO-like kinase 99.8 2.5E-19 5.4E-24 148.4 10.0 125 58-187 29-183 (237)
425 PRK14879 serine/threonine prot 99.8 5.3E-18 1.1E-22 138.7 13.3 118 63-187 2-129 (211)
426 KOG1023 Natriuretic peptide re 99.8 2.1E-18 4.5E-23 153.3 11.4 185 106-292 1-218 (484)
427 KOG0590 Checkpoint kinase and 99.7 3.9E-19 8.5E-24 164.6 -0.1 240 56-299 19-291 (601)
428 cd05144 RIO2_C RIO kinase fami 99.7 2.1E-17 4.5E-22 133.8 9.2 123 58-192 16-164 (198)
429 PRK09605 bifunctional UGMP fam 99.7 3.4E-17 7.4E-22 151.7 11.7 121 56-187 332-462 (535)
430 TIGR03724 arch_bud32 Kae1-asso 99.7 4.7E-17 1E-21 131.9 10.2 114 64-187 1-124 (199)
431 cd05119 RIO RIO kinase family, 99.6 4.4E-16 9.5E-21 124.9 7.8 118 62-187 2-149 (187)
432 PRK01723 3-deoxy-D-manno-octul 99.6 2.1E-15 4.5E-20 125.2 11.4 121 63-190 37-179 (239)
433 cd05120 APH_ChoK_like Aminogly 99.6 4.2E-15 9.2E-20 114.4 11.4 119 61-189 2-125 (155)
434 KOG1033 eIF-2alpha kinase PEK/ 99.6 5.3E-16 1.1E-20 136.1 5.1 157 127-298 330-516 (516)
435 KOG0601 Cyclin-dependent kinas 99.5 3.5E-14 7.6E-19 126.7 10.9 230 58-298 115-383 (524)
436 KOG1266 Protein kinase [Signal 99.5 1.7E-14 3.8E-19 119.7 7.2 187 105-299 120-336 (458)
437 KOG0606 Microtubule-associated 99.5 1.2E-14 2.5E-19 136.6 4.8 238 56-300 803-1098(1205)
438 KOG1243 Protein kinase [Genera 99.5 3.8E-13 8.3E-18 121.5 14.2 153 75-233 30-199 (690)
439 PRK04750 ubiB putative ubiquin 99.5 7E-13 1.5E-17 121.0 13.8 140 57-205 120-311 (537)
440 KOG0601 Cyclin-dependent kinas 99.4 8.7E-14 1.9E-18 124.2 5.7 232 54-298 262-518 (524)
441 TIGR01982 UbiB 2-polyprenylphe 99.4 2.5E-12 5.4E-17 115.8 14.9 125 63-191 123-295 (437)
442 cd05151 ChoK Choline Kinase (C 99.3 5.4E-12 1.2E-16 99.4 9.0 114 62-188 3-123 (170)
443 cd05146 RIO3_euk RIO kinase fa 99.3 3.3E-11 7.1E-16 96.1 11.7 134 63-207 3-173 (197)
444 KOG3741 Poly(A) ribonuclease s 99.3 2.1E-10 4.5E-15 101.3 16.7 214 63-294 282-521 (655)
445 cd05154 ACAD10_11_like Acyl-Co 99.1 4.3E-10 9.3E-15 92.4 9.7 106 63-170 4-116 (223)
446 COG3642 Mn2+-dependent serine/ 99.1 1.7E-09 3.8E-14 83.8 11.0 116 63-190 2-129 (204)
447 KOG3087 Serine/threonine prote 99.0 6.8E-09 1.5E-13 80.3 9.9 129 61-192 11-152 (229)
448 PRK15123 lipopolysaccharide co 99.0 9.9E-09 2.2E-13 86.4 11.8 116 71-188 36-173 (268)
449 KOG2137 Protein kinase [Signal 98.9 6E-10 1.3E-14 101.6 3.5 135 164-300 110-271 (700)
450 COG0478 RIO-like serine/threon 98.9 7.2E-09 1.6E-13 85.1 7.5 147 60-222 94-267 (304)
451 PF01163 RIO1: RIO1 family; I 98.8 3.1E-08 6.8E-13 78.7 8.6 122 72-207 1-155 (188)
452 PF06293 Kdo: Lipopolysacchari 98.8 1.2E-07 2.6E-12 77.1 12.1 92 99-190 58-155 (206)
453 PRK09902 hypothetical protein; 98.5 1.7E-06 3.8E-11 69.4 10.8 124 65-190 26-165 (216)
454 COG4248 Uncharacterized protei 98.5 4.6E-06 1E-10 72.7 13.7 227 60-290 14-292 (637)
455 PF06176 WaaY: Lipopolysacchar 98.4 1.5E-06 3.3E-11 70.1 8.9 124 57-190 31-172 (229)
456 COG0661 AarF Predicted unusual 98.2 2.7E-05 5.8E-10 71.4 12.6 132 63-205 131-312 (517)
457 TIGR02172 Fb_sc_TIGR02172 Fibr 98.2 1.8E-05 3.9E-10 65.2 9.7 72 63-139 7-80 (226)
458 PF13095 FTA2: Kinetochore Sim 98.2 0.0001 2.2E-09 58.9 13.4 114 57-185 37-196 (207)
459 COG1718 RIO1 Serine/threonine 98.1 1.8E-05 4E-10 64.7 9.0 121 62-189 53-203 (268)
460 COG2112 Predicted Ser/Thr prot 98.0 1.6E-05 3.4E-10 61.6 6.8 116 59-188 24-142 (201)
461 KOG1093 Predicted protein kina 98.0 3.2E-06 6.8E-11 75.6 3.4 162 100-299 30-199 (725)
462 KOG1035 eIF-2alpha kinase GCN2 98.0 1.3E-05 2.9E-10 77.9 7.8 181 102-298 232-438 (1351)
463 PF10707 YrbL-PhoP_reg: PhoP r 98.0 8.3E-05 1.8E-09 59.7 10.3 121 62-191 6-156 (199)
464 KOG1235 Predicted unusual prot 97.8 0.00021 4.6E-09 65.5 10.5 120 63-190 167-338 (538)
465 KOG0576 Mitogen-activated prot 97.8 1.5E-06 3.2E-11 79.3 -3.8 221 58-299 243-489 (829)
466 cd05150 APH Aminoglycoside 3'- 97.7 0.00047 1E-08 57.5 10.9 76 64-143 5-82 (244)
467 cd05155 APH_ChoK_like_1 Unchar 97.7 0.00015 3.2E-09 60.2 7.3 73 63-140 3-81 (235)
468 PRK10593 hypothetical protein; 97.5 0.00085 1.8E-08 57.7 9.8 105 60-171 17-126 (297)
469 KOG2270 Serine/threonine prote 97.4 0.0014 3.1E-08 56.9 9.0 125 61-189 148-301 (520)
470 PLN02876 acyl-CoA dehydrogenas 97.3 0.0014 3.1E-08 64.4 9.6 108 62-171 43-160 (822)
471 KOG2268 Serine/threonine prote 97.1 0.00018 3.8E-09 61.3 1.3 132 59-207 94-251 (465)
472 TIGR02721 ycfN_thiK thiamine k 97.0 0.0039 8.5E-08 52.4 8.3 70 64-140 3-75 (256)
473 PF01636 APH: Phosphotransfera 97.0 0.0016 3.4E-08 53.6 5.5 79 62-142 2-84 (239)
474 PF12260 PIP49_C: Protein-kina 96.9 0.0022 4.7E-08 51.2 5.9 89 100-193 7-102 (188)
475 TIGR00938 thrB_alt homoserine 96.9 0.0094 2E-07 51.6 10.0 80 59-140 24-110 (307)
476 PRK05231 homoserine kinase; Pr 96.8 0.026 5.6E-07 49.1 11.9 76 61-139 26-108 (319)
477 cd05153 HomoserineK_II Homoser 96.7 0.013 2.9E-07 50.3 9.7 77 61-140 18-101 (296)
478 PLN02756 S-methyl-5-thioribose 96.7 0.031 6.7E-07 49.9 11.8 72 61-137 36-119 (418)
479 TIGR01767 MTRK 5-methylthiorib 96.5 0.031 6.6E-07 49.1 10.3 71 64-137 2-84 (370)
480 PF03881 Fructosamin_kin: Fruc 95.9 0.046 1E-06 46.7 8.1 75 60-138 20-97 (288)
481 cd05157 ETNK_euk Ethanolamine 95.6 0.099 2.1E-06 43.1 9.1 99 62-173 3-104 (235)
482 cd05152 MPH2' Macrolide 2'-Pho 95.0 0.09 1.9E-06 44.7 6.9 45 65-110 19-63 (276)
483 PLN02236 choline kinase 94.8 0.4 8.7E-06 42.2 10.6 75 62-141 41-121 (344)
484 PRK09550 mtnK methylthioribose 94.1 0.93 2E-05 40.7 11.4 81 62-145 31-124 (401)
485 KOG1236 Predicted unusual prot 94.0 0.21 4.7E-06 44.4 7.0 62 127-189 319-381 (565)
486 KOG1826 Ras GTPase activating 94.0 0.021 4.6E-07 58.4 1.0 136 102-237 1279-1440(2724)
487 COG2334 Putative homoserine ki 93.7 0.81 1.8E-05 40.0 10.0 75 63-141 32-116 (331)
488 cd05156 ChoK_euk Choline Kinas 93.6 0.38 8.3E-06 41.3 8.1 98 63-173 4-109 (302)
489 KOG1033 eIF-2alpha kinase PEK/ 93.5 0.0086 1.9E-07 54.0 -2.4 69 55-123 47-118 (516)
490 COG3001 Uncharacterized protei 93.4 0.43 9.4E-06 39.2 7.3 73 65-141 24-99 (286)
491 PRK06148 hypothetical protein; 93.4 3 6.6E-05 42.4 14.8 79 62-142 30-122 (1013)
492 PLN02421 phosphotransferase, a 93.3 1 2.2E-05 39.5 10.2 73 63-140 20-97 (330)
493 PF04655 APH_6_hur: Aminoglyco 92.4 0.62 1.3E-05 39.0 7.2 79 62-144 7-86 (253)
494 PTZ00384 choline kinase; Provi 91.6 2.3 4.9E-05 38.1 10.3 75 62-141 55-137 (383)
495 PHA03111 Ser/Thr kinase; Provi 90.5 0.48 1E-05 41.1 4.6 63 128-190 250-320 (444)
496 PF03109 ABC1: ABC1 family; I 88.8 0.1 2.2E-06 38.2 -0.5 44 63-108 17-60 (119)
497 PRK11768 serine/threonine prot 88.6 4.7 0.0001 35.2 9.7 69 69-139 37-113 (325)
498 PF05445 Pox_ser-thr_kin: Poxv 88.1 0.56 1.2E-05 40.9 3.4 40 152-191 274-317 (434)
499 PRK12396 5-methylribose kinase 88.0 1.8 4E-05 38.7 6.7 102 62-167 34-147 (409)
500 COG3173 Predicted aminoglycosi 80.4 7.4 0.00016 33.8 6.9 84 55-141 23-113 (321)
No 1
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.1e-58 Score=385.18 Aligned_cols=243 Identities=30% Similarity=0.412 Sum_probs=210.0
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC---------CCHHHHHHHHhcCCCceeEeceeeeCCCC
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP---------PNPQELNILRQTNSPYIVKCHQIFTKPSG 126 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---------~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 126 (300)
.+.|.+.+.||+|+||.|-+|..++|++.||||++++..... ...+|+++|++++|||||+++++|+.+.
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d- 249 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD- 249 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC-
Confidence 356889999999999999999999999999999997643221 1258999999999999999999999876
Q ss_pred cEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCC--------------
Q 040812 127 EVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEH-------------- 192 (300)
Q Consensus 127 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~-------------- 192 (300)
+.||||||++||+|.+.+..++.+.+..-+.+++|++.|+.|||++||+||||||+|||+..+...
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~ 329 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVS 329 (475)
T ss_pred ceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhcc
Confidence 889999999999999999999999999999999999999999999999999999999999876221
Q ss_pred -------CccceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCC
Q 040812 193 -------PCGYSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265 (300)
Q Consensus 193 -------~~~~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (300)
.+.++..|-+||......-..+..++||||+||+||-+++|.+||.+....+...+.+........+..+..+
T Consensus 330 g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~I 409 (475)
T KOG0615|consen 330 GEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRI 409 (475)
T ss_pred ccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhh
Confidence 1234667888888765544445569999999999999999999999887777666666555555566677889
Q ss_pred ChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCCC
Q 040812 266 SEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300 (300)
Q Consensus 266 ~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~~ 300 (300)
+++..+||.+||.. ||++|||++|+|+||||+++
T Consensus 410 seea~dlI~~mL~V-dP~~R~s~~eaL~hpW~~~~ 443 (475)
T KOG0615|consen 410 SEEALDLINWMLVV-DPENRPSADEALNHPWFKDA 443 (475)
T ss_pred hHHHHHHHHHhhEe-CcccCcCHHHHhcChhhhcc
Confidence 99999999999999 99999999999999999864
No 2
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=9e-54 Score=355.90 Aligned_cols=240 Identities=48% Similarity=0.767 Sum_probs=211.9
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEE
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILM 132 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~ 132 (300)
.++.+.++.||+|..|+||+++++.|++.+|+|++...... .+..+|+++++..+||+||.+|+.|..+...++|+|
T Consensus 78 ~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~m 157 (364)
T KOG0581|consen 78 LSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICM 157 (364)
T ss_pred HHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeeh
Confidence 45778899999999999999999999999999999543322 233679999999999999999999987642499999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCceeecCCCCCCc-----------------
Q 040812 133 EYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHS-RNIVHRDIKPANVLINEKMEHPC----------------- 194 (300)
Q Consensus 133 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~-~~i~H~Dlkp~Nill~~~~~~~~----------------- 194 (300)
|||++|+|.+++...+++++.....++.++++||.|||+ .+|+||||||+|||++.++..++
T Consensus 158 EYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~tf 237 (364)
T KOG0581|consen 158 EYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANTF 237 (364)
T ss_pred hhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhhhcccc
Confidence 999999999999988899999999999999999999995 89999999999999999877532
Q ss_pred cceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-CCCchHHHHHHHHhhCCCCCCCCC-CChHHHHH
Q 040812 195 GYSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEP-GQEPDFLSLMLAICFREPPSLPEC-SSEKFRDF 272 (300)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~l 272 (300)
.++..|++||-.. |..|+.++||||||++++|+++|+.||... .....+.+.+..+..+.+|.+|.. +++++++|
T Consensus 238 vGT~~YMsPERi~---g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~F 314 (364)
T KOG0581|consen 238 VGTSAYMSPERIS---GESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSF 314 (364)
T ss_pred cccccccChhhhc---CCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHH
Confidence 2355566666544 778999999999999999999999999765 345677888888999999999997 99999999
Q ss_pred HHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 273 IRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 273 i~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
|.+||++ ||.+|||+.|+++|||+++
T Consensus 315 V~~CL~K-dp~~R~s~~qLl~Hpfi~~ 340 (364)
T KOG0581|consen 315 VSCCLRK-DPSERPSAKQLLQHPFIKK 340 (364)
T ss_pred HHHHhcC-CcccCCCHHHHhcCHHHhh
Confidence 9999999 9999999999999999975
No 3
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.7e-53 Score=369.37 Aligned_cols=232 Identities=30% Similarity=0.435 Sum_probs=201.0
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv 131 (300)
.+|...+.||+|||+.+|.+++..+|+.||+|++.+.... ....+|+++.++|+|||||+++++|++.. ++|||
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~-nVYiv 96 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSN-NVYIV 96 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCC-ceEEE
Confidence 5799999999999999999999999999999999764333 33467999999999999999999999876 99999
Q ss_pred EeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccceee------------
Q 040812 132 MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCL------------ 199 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~~------------ 199 (300)
+|+|..++|..+++.+..++|.+++.+++||+.||.|||+++|+|||||..|+|++++...++|++++
T Consensus 97 LELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~ 176 (592)
T KOG0575|consen 97 LELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKK 176 (592)
T ss_pred EEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCcccccc
Confidence 99999999999999888999999999999999999999999999999999999999998877766555
Q ss_pred -------ccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHH
Q 040812 200 -------YESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDF 272 (300)
Q Consensus 200 -------~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 272 (300)
|.+||... ....+..+||||+||+||-||+|++||... ...+.... .......+|..++.++++|
T Consensus 177 TlCGTPNYIAPEVl~---k~gHsfEvDiWSlGcvmYtLL~G~PPFetk----~vkety~~-Ik~~~Y~~P~~ls~~A~dL 248 (592)
T KOG0575|consen 177 TLCGTPNYIAPEVLN---KSGHSFEVDIWSLGCVMYTLLVGRPPFETK----TVKETYNK-IKLNEYSMPSHLSAEAKDL 248 (592)
T ss_pred eecCCCcccChhHhc---cCCCCCchhhhhhhhHHHhhhhCCCCcccc----hHHHHHHH-HHhcCcccccccCHHHHHH
Confidence 44444444 334567899999999999999999999542 22233332 2355677888999999999
Q ss_pred HHHHhccCCCCCCCCHHHHhcCCCCC
Q 040812 273 IRCCLQKGDPSKRWTASQLLSHPFLA 298 (300)
Q Consensus 273 i~~~l~~~dp~~Rpt~~~~l~hpw~~ 298 (300)
|.++|+. ||.+|||++++|.|+||.
T Consensus 249 I~~lL~~-~P~~Rpsl~~vL~h~Ff~ 273 (592)
T KOG0575|consen 249 IRKLLRP-NPSERPSLDEVLDHPFFK 273 (592)
T ss_pred HHHHhcC-CcccCCCHHHHhcCHhhh
Confidence 9999999 999999999999999994
No 4
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-52 Score=362.14 Aligned_cols=238 Identities=28% Similarity=0.402 Sum_probs=204.5
Q ss_pred cCCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhc-CCCceeEeceeeeCCCC
Q 040812 53 IDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQT-NSPYIVKCHQIFTKPSG 126 (300)
Q Consensus 53 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 126 (300)
.....+|..++.||+|+|++|++|+++.+++.||||++.+.... +-...|-.+|.+| .||+|++|+..|.++.
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~- 147 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEE- 147 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeeccc-
Confidence 55678899999999999999999999999999999998754332 2235699999999 8999999999999876
Q ss_pred cEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcc-----------
Q 040812 127 EVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG----------- 195 (300)
Q Consensus 127 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~----------- 195 (300)
.+|+|+||+++|+|.++|.+.+.|++..++.++.||+.||+|||++|||||||||+|||++.++...+.
T Consensus 148 sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~ 227 (604)
T KOG0592|consen 148 SLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPS 227 (604)
T ss_pred ceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChh
Confidence 899999999999999999999999999999999999999999999999999999999999988765322
Q ss_pred ---------------------ceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHh
Q 040812 196 ---------------------YSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAIC 254 (300)
Q Consensus 196 ---------------------~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~ 254 (300)
++..|-+||... .+..++.+|+|+||||+|+|+.|.+||...++...+..++
T Consensus 228 ~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~---~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~---- 300 (604)
T KOG0592|consen 228 QKSQENPVDPNQASSRRSSFVGTAEYVSPELLN---DSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQ---- 300 (604)
T ss_pred hccccCccCcccccCcccceeeeecccCHHHhc---CCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHH----
Confidence 233344444443 4456779999999999999999999998766544443333
Q ss_pred hCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCCC
Q 040812 255 FREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300 (300)
Q Consensus 255 ~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~~ 300 (300)
.....+|...++.++|||+++|.. ||++|+|+++|.+||||+++
T Consensus 301 -~l~y~fp~~fp~~a~dLv~KLLv~-dp~~Rlt~~qIk~HpFF~~V 344 (604)
T KOG0592|consen 301 -ALDYEFPEGFPEDARDLIKKLLVR-DPSDRLTSQQIKAHPFFEGV 344 (604)
T ss_pred -HhcccCCCCCCHHHHHHHHHHHcc-CccccccHHHHhhCcccccC
Confidence 345677888899999999999999 99999999999999999875
No 5
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-52 Score=347.35 Aligned_cols=238 Identities=31% Similarity=0.487 Sum_probs=206.5
Q ss_pred CCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCC-----CHHHHHHHHhcCCCceeEeceeeeCCCCcE
Q 040812 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPP-----NPQELNILRQTNSPYIVKCHQIFTKPSGEV 128 (300)
Q Consensus 54 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-----~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 128 (300)
.+.++|++++.||+|+||+|++++.+++++.||+|++++...... ...|..+|.+++||.||.++..|++.. .+
T Consensus 22 ~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~-kL 100 (357)
T KOG0598|consen 22 VGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEE-KL 100 (357)
T ss_pred CChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCC-eE
Confidence 456889999999999999999999999999999999987554332 357999999999999999999999865 99
Q ss_pred EEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCC---------------
Q 040812 129 SILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHP--------------- 193 (300)
Q Consensus 129 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~--------------- 193 (300)
|+|+||+.||.|...+++.+.|++..++.++..|+.||.|||++||+||||||+|||++.++...
T Consensus 101 ylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~ 180 (357)
T KOG0598|consen 101 YLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGD 180 (357)
T ss_pred EEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999886642
Q ss_pred ----ccceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHH
Q 040812 194 ----CGYSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269 (300)
Q Consensus 194 ----~~~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 269 (300)
+.++.-|++||... +..++..+|+||||+++|||+||.+||...+.. +.+..+.....+..|..++.+.
T Consensus 181 ~t~tfcGT~eYmAPEil~---~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~----~~~~~I~~~k~~~~p~~ls~~a 253 (357)
T KOG0598|consen 181 ATRTFCGTPEYMAPEILL---GKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVK----KMYDKILKGKLPLPPGYLSEEA 253 (357)
T ss_pred ccccccCCccccChHHHh---cCCCCcccchHhHHHHHHHHhhCCCCCcCccHH----HHHHHHhcCcCCCCCccCCHHH
Confidence 23455677777766 557888999999999999999999999765433 4444444444466677799999
Q ss_pred HHHHHHHhccCCCCCCC----CHHHHhcCCCCCCC
Q 040812 270 RDFIRCCLQKGDPSKRW----TASQLLSHPFLADA 300 (300)
Q Consensus 270 ~~li~~~l~~~dp~~Rp----t~~~~l~hpw~~~~ 300 (300)
++++.++|+. ||++|. ++.++.+||||+++
T Consensus 254 rdll~~LL~r-dp~~RLg~~~d~~~ik~HpfF~~i 287 (357)
T KOG0598|consen 254 RDLLKKLLKR-DPRQRLGGPGDAEEIKRHPFFKGI 287 (357)
T ss_pred HHHHHHHhcc-CHHHhcCCCCChHHhhcCcccccC
Confidence 9999999999 999996 69999999999864
No 6
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-50 Score=338.76 Aligned_cols=240 Identities=28% Similarity=0.438 Sum_probs=200.9
Q ss_pred cCCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCC----CHHHHHHHHhcCCCceeEeceeeeCCCCcE
Q 040812 53 IDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPP----NPQELNILRQTNSPYIVKCHQIFTKPSGEV 128 (300)
Q Consensus 53 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~----~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 128 (300)
....++|.+.+.||+|+||+||+|+++.++..||||.+.+...... ...|+++|+.++|||||++++++..++ ++
T Consensus 6 ~~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~-~i 84 (429)
T KOG0595|consen 6 MRVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDD-FI 84 (429)
T ss_pred ccccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCC-eE
Confidence 3456789999999999999999999999999999999976653322 246999999999999999999988865 99
Q ss_pred EEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCC-CC--------CCcc----
Q 040812 129 SILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEK-ME--------HPCG---- 195 (300)
Q Consensus 129 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~-~~--------~~~~---- 195 (300)
|+|||||.||+|.+|++.++.+++..++.++.||+.||++||+++|+||||||+|||++.. .. .++|
T Consensus 85 ~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~ 164 (429)
T KOG0595|consen 85 YLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARF 164 (429)
T ss_pred EEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhh
Confidence 9999999999999999999999999999999999999999999999999999999999875 21 1222
Q ss_pred -----------ceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCC
Q 040812 196 -----------YSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPEC 264 (300)
Q Consensus 196 -----------~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (300)
++.+|++||... ...|+.|+|+||+|+|+|+|++|+.||...+..+-. . .........+..+..
T Consensus 165 L~~~~~a~tlcGSplYMAPEV~~---~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~-~-~~~k~~~~~~~~~~~ 239 (429)
T KOG0595|consen 165 LQPGSMAETLCGSPLYMAPEVIM---SQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELL-L-YIKKGNEIVPVLPAE 239 (429)
T ss_pred CCchhHHHHhhCCccccCHHHHH---hccccchhhHHHHHHHHHHHHhCCCCccccCHHHHH-H-HHhccccccCchhhh
Confidence 466688888765 345788999999999999999999999765443222 1 122233445666777
Q ss_pred CChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 265 SSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 265 ~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
.+..+.+++...++. ||..|.+..+.+.|+++..
T Consensus 240 ~s~~~~~Ll~~ll~~-~~~~~~~~~~~~~~~~l~~ 273 (429)
T KOG0595|consen 240 LSNPLRELLISLLQR-NPKDRISFEDFFDHPFLAA 273 (429)
T ss_pred ccCchhhhhhHHHhc-CccccCchHHhhhhhhccc
Confidence 888888999999999 9999999999999998753
No 7
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-50 Score=326.91 Aligned_cols=237 Identities=28% Similarity=0.460 Sum_probs=205.3
Q ss_pred CCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcE
Q 040812 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEV 128 (300)
Q Consensus 54 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 128 (300)
..+++|+.++.||.|+||.|.+++.+.+|..+|+|++...... +...+|..+|+.+.||+++++++.+.+.. ++
T Consensus 41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~-~l 119 (355)
T KOG0616|consen 41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNS-NL 119 (355)
T ss_pred cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCC-eE
Confidence 4678999999999999999999999999999999999765433 23467999999999999999999988765 99
Q ss_pred EEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcc-------------
Q 040812 129 SILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG------------- 195 (300)
Q Consensus 129 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~------------- 195 (300)
||||||.+||.|..++++.++|++..++.++.||+.||+|||+.+|++|||||+|||+|.++..++.
T Consensus 120 ymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~ 199 (355)
T KOG0616|consen 120 YMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTW 199 (355)
T ss_pred EEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecCcEE
Confidence 9999999999999999999999999999999999999999999999999999999999998775332
Q ss_pred ---ceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHH
Q 040812 196 ---YSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDF 272 (300)
Q Consensus 196 ---~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 272 (300)
++.-|.+||... ...++.++|+|||||++|||+.|.+||...+.. .+...+. .....+|...++++++|
T Consensus 200 TlCGTPeYLAPEii~---sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~----~iY~KI~-~~~v~fP~~fs~~~kdL 271 (355)
T KOG0616|consen 200 TLCGTPEYLAPEIIQ---SKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPI----QIYEKIL-EGKVKFPSYFSSDAKDL 271 (355)
T ss_pred EecCCccccChHHhh---cCCCCcchhHHHHHHHHHHHHcCCCCCcCCChH----HHHHHHH-hCcccCCcccCHHHHHH
Confidence 244466666655 556788999999999999999999999876653 3333333 45678899999999999
Q ss_pred HHHHhccCCCCCCC-----CHHHHhcCCCCCCC
Q 040812 273 IRCCLQKGDPSKRW-----TASQLLSHPFLADA 300 (300)
Q Consensus 273 i~~~l~~~dp~~Rp-----t~~~~l~hpw~~~~ 300 (300)
|..+|+. |-.+|. ...++.+||||+++
T Consensus 272 l~~LL~v-D~t~R~gnlknG~~dIk~H~wF~~v 303 (355)
T KOG0616|consen 272 LKKLLQV-DLTKRFGNLKNGVEDIKNHPWFKGV 303 (355)
T ss_pred HHHHHhh-hhHhhhcCcCCCccccccCcccccc
Confidence 9999999 999994 58899999999874
No 8
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-51 Score=347.90 Aligned_cols=242 Identities=30% Similarity=0.391 Sum_probs=200.1
Q ss_pred CCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC---CCHHHHHHHHhcC-CCceeEeceeeeCCCCcEE
Q 040812 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP---PNPQELNILRQTN-SPYIVKCHQIFTKPSGEVS 129 (300)
Q Consensus 54 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~ 129 (300)
...++|.++++||.|+||.||+|+.+.++..||||.++...... ..++|+..|++++ ||||+++.+++.+....+|
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~ 86 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILY 86 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence 44678999999999999999999999999999999987654332 2268999999999 9999999999877654899
Q ss_pred EEEeccCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc------------
Q 040812 130 ILMEYMDAGSLEIYVKSRG-RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY------------ 196 (300)
Q Consensus 130 lv~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~------------ 196 (300)
+|||||+. +|.++++.++ .|++..++.|+.||++||+|+|.+|+.|||+||+|||+..+...++++
T Consensus 87 fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpP 165 (538)
T KOG0661|consen 87 FVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKPP 165 (538)
T ss_pred eeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccccCCC
Confidence 99999977 9999998765 599999999999999999999999999999999999999655544443
Q ss_pred ------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCC----------
Q 040812 197 ------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPS---------- 260 (300)
Q Consensus 197 ------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~---------- 260 (300)
+..|.+||...+ .++|+.++||||+|||++|+.+-++.|.+.++.+.+.++...+.......
T Consensus 166 YTeYVSTRWYRAPEvLLr--s~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~ 243 (538)
T KOG0661|consen 166 YTEYVSTRWYRAPEVLLR--SGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASA 243 (538)
T ss_pred cchhhhcccccchHHhhh--ccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHH
Confidence 444777777665 45889999999999999999999999977666555554444332111111
Q ss_pred ---------------CCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 261 ---------------LPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 261 ---------------~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
+-..++.++.++|.+||.. ||++||||+++|+||||+.
T Consensus 244 mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~W-DP~kRpTA~~al~~pffq~ 296 (538)
T KOG0661|consen 244 MNFRFPQVKPSPLKDLLPNASSEAASLIERLLAW-DPDKRPTASQALQHPFFQV 296 (538)
T ss_pred hccCCCcCCCCChHHhCcccCHHHHHHHHHHhcC-CCccCccHHHHhcCccccc
Confidence 1122578899999999999 9999999999999999974
No 9
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-49 Score=343.51 Aligned_cols=238 Identities=32% Similarity=0.486 Sum_probs=200.6
Q ss_pred CCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCC-------CCCCCHHHHHHHHhcC-CCceeEeceeeeCCC
Q 040812 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDR-------GTPPNPQELNILRQTN-SPYIVKCHQIFTKPS 125 (300)
Q Consensus 54 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~ 125 (300)
...++|++.+.||+|+||+|++|++..+++.||+|++.... ......+|+.++++++ ||||+++++++..+.
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 34678999999999999999999999999999999776541 1223357999999999 999999999999876
Q ss_pred CcEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCC-CCCCc----------
Q 040812 126 GEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEK-MEHPC---------- 194 (300)
Q Consensus 126 ~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~-~~~~~---------- 194 (300)
.+|+|||||.||+|.+++...+++.+..++.+++||++|++|+|++||+||||||+|||++.+ +..++
T Consensus 94 -~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~ 172 (370)
T KOG0583|consen 94 -KIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISP 172 (370)
T ss_pred -eEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccC
Confidence 699999999999999999998899999999999999999999999999999999999999987 54322
Q ss_pred ---------cceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCC
Q 040812 195 ---------GYSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265 (300)
Q Consensus 195 ---------~~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (300)
-++..|.+||...... .+.+.++||||+||+||.|++|+.||...+. ...... .......+|..+
T Consensus 173 ~~~~~l~t~cGsp~Y~aPEvl~~~~-~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~----~~l~~k-i~~~~~~~p~~~ 246 (370)
T KOG0583|consen 173 GEDGLLKTFCGSPAYAAPEVLSGKG-TYSGKAADVWSLGVILYVLLCGRLPFDDSNV----PNLYRK-IRKGEFKIPSYL 246 (370)
T ss_pred CCCCcccCCCCCcccCCHHHhCCCC-CcCCchhhhhhhHHHHHHHHhCCCCCCCccH----HHHHHH-HhcCCccCCCCc
Confidence 2344566666655321 1557899999999999999999999976322 222222 445667788888
Q ss_pred -ChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 266 -SEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 266 -~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
+.++++|+.+||.. ||.+|+++.++++||||+.
T Consensus 247 ~S~~~~~Li~~mL~~-~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 247 LSPEARSLIEKMLVP-DPSTRITLLEILEHPWFQK 280 (370)
T ss_pred CCHHHHHHHHHHcCC-CcccCCCHHHHhhChhhcc
Confidence 99999999999999 9999999999999999984
No 10
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=4.6e-50 Score=324.82 Aligned_cols=239 Identities=26% Similarity=0.444 Sum_probs=189.2
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCC----CHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPP----NPQELNILRQTNSPYIVKCHQIFTKPSGEVSILM 132 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~----~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~ 132 (300)
+.|+.+.++|+|+||.||+|++++||+.||||.|........ ..+|+++|++++|+|+|.++++|.... .+++|+
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkr-klhLVF 80 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKR-KLHLVF 80 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcc-eeEEEe
Confidence 578999999999999999999999999999999975544332 268999999999999999999998754 899999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCc---cc-------------
Q 040812 133 EYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPC---GY------------- 196 (300)
Q Consensus 133 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~---~~------------- 196 (300)
|||+..-|.++-.....++...++.++.|++.|+.|+|+++++||||||+|||++.++..+. |+
T Consensus 81 E~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTD 160 (396)
T KOG0593|consen 81 EYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTD 160 (396)
T ss_pred eecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhh
Confidence 99998444444343446899999999999999999999999999999999999999876543 33
Q ss_pred ---eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCC---------CC-----
Q 040812 197 ---SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFRE---------PP----- 259 (300)
Q Consensus 197 ---~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~---------~~----- 259 (300)
+..|.+||.... ...|++++||||+||++.||+||.+.|.+..+-.....+......-. .+
T Consensus 161 YVATRWYRaPELLvG--DtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv 238 (396)
T KOG0593|consen 161 YVATRWYRAPELLVG--DTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGV 238 (396)
T ss_pred hhhhhhccChhhhcc--cCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeee
Confidence 222444444331 25789999999999999999999999977665554444444322110 00
Q ss_pred CCC------------CCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 260 SLP------------ECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 260 ~~~------------~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
.+| ...+.-+.||++.||.. ||.+|++.++++.||||.+
T Consensus 239 ~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~-dP~~R~sc~qll~H~yFd~ 289 (396)
T KOG0593|consen 239 RLPEPEHPEPLERKYPKISNVLLDLLKKCLKM-DPDDRLSCEQLLHHPYFDG 289 (396)
T ss_pred ecCCCCCccchhhhcccchHHHHHHHHHHhcC-CccccccHHHHhcChHHHH
Confidence 011 12356789999999999 9999999999999999953
No 11
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=5.8e-49 Score=340.11 Aligned_cols=240 Identities=27% Similarity=0.380 Sum_probs=199.1
Q ss_pred CCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC-----CCHHHHHHHHhcCCCceeEeceeeeCCCCcE
Q 040812 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP-----PNPQELNILRQTNSPYIVKCHQIFTKPSGEV 128 (300)
Q Consensus 54 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 128 (300)
.+.++|++++.||+|+||.||+|+.+.||.++|+|++++..... ....|-.+|....+|+||+++..|.+.. ++
T Consensus 138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~-~L 216 (550)
T KOG0605|consen 138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKE-YL 216 (550)
T ss_pred CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCC-ee
Confidence 36788999999999999999999999999999999998754332 2356889999999999999999999876 99
Q ss_pred EEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcccee----------
Q 040812 129 SILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSC---------- 198 (300)
Q Consensus 129 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~---------- 198 (300)
||||||++||++.++|...+.|++..++.++.+++.|+..||+.|++||||||+|+|||..|..++.+++
T Consensus 217 YLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~ 296 (550)
T KOG0605|consen 217 YLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHR 296 (550)
T ss_pred EEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhh
Confidence 9999999999999999999999999999999999999999999999999999999999987665333222
Q ss_pred --------------------------------------------------------eccccccccccCCCCCCchhhHHH
Q 040812 199 --------------------------------------------------------LYESGEARHRKHGGYNGFAADIWS 222 (300)
Q Consensus 199 --------------------------------------------------------~~~~~~~~~~~~~~~~~~~~DiwS 222 (300)
-|.+||... +..|+..+|+||
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll---~kgY~~~cDwWS 373 (550)
T KOG0605|consen 297 IESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLL---GKGYGKECDWWS 373 (550)
T ss_pred hhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHh---cCCCCccccHHH
Confidence 233333332 455677999999
Q ss_pred HHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHhccCCCCCCCC---HHHHhcCCCCCC
Q 040812 223 FGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWT---ASQLLSHPFLAD 299 (300)
Q Consensus 223 lG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt---~~~~l~hpw~~~ 299 (300)
|||||||||.|.+||...+....+.+++.-.. ..........+++.+|||.+||. ||++|.. ++||.+||||++
T Consensus 374 LG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~-~l~fP~~~~~s~eA~DLI~rll~--d~~~RLG~~G~~EIK~HPfF~~ 450 (550)
T KOG0605|consen 374 LGCIMYEMLVGYPPFCSETPQETYRKIVNWRE-TLKFPEEVDLSDEAKDLITRLLC--DPENRLGSKGAEEIKKHPFFKG 450 (550)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhh-hccCCCcCcccHHHHHHHHHHhc--CHHHhcCcccHHHHhcCCcccc
Confidence 99999999999999988777666655553221 11122223467999999999996 8999985 999999999987
Q ss_pred C
Q 040812 300 A 300 (300)
Q Consensus 300 ~ 300 (300)
+
T Consensus 451 v 451 (550)
T KOG0605|consen 451 V 451 (550)
T ss_pred C
Confidence 5
No 12
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-49 Score=334.00 Aligned_cols=239 Identities=35% Similarity=0.545 Sum_probs=195.7
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCC--CCCCHHHHHHHHhcCCCceeEeceeeeCCCC-cEEEEE
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG--TPPNPQELNILRQTNSPYIVKCHQIFTKPSG-EVSILM 132 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~lv~ 132 (300)
..+|...+.||+|+||.||++.+.++|...|||.+..... .+...+|+.+|.+++|||||+++|......+ .++++|
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m 95 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM 95 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence 4567889999999999999999999999999999865421 1224689999999999999999997544333 689999
Q ss_pred eccCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecC-CCCCCc----------------
Q 040812 133 EYMDAGSLEIYVKSRG-RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINE-KMEHPC---------------- 194 (300)
Q Consensus 133 e~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~-~~~~~~---------------- 194 (300)
||+++|+|.+++...+ .+++..++.+++||+.||.|||++|++||||||+|||++. ++..++
T Consensus 96 Ey~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~ 175 (313)
T KOG0198|consen 96 EYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKS 175 (313)
T ss_pred eccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccccccccc
Confidence 9999999999999876 7999999999999999999999999999999999999988 443322
Q ss_pred ------cceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChH
Q 040812 195 ------GYSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEK 268 (300)
Q Consensus 195 ------~~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (300)
-++..|++||.... |....+++|||||||++.||+||+.||... ................|.+|..++++
T Consensus 176 ~~~~~~~Gtp~~maPEvi~~--g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~--~~~~~~~~~ig~~~~~P~ip~~ls~~ 251 (313)
T KOG0198|consen 176 DSELSVQGTPNYMAPEVIRN--GEVARRESDIWSLGCTVVEMLTGKPPWSEF--FEEAEALLLIGREDSLPEIPDSLSDE 251 (313)
T ss_pred cccccccCCccccCchhhcC--CCcCCccchhhhcCCEEEeccCCCCcchhh--cchHHHHHHHhccCCCCCCCcccCHH
Confidence 23455667776553 333446999999999999999999999753 11111222323334466889999999
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 269 FRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 269 l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
.++||.+|+.. ||++|||++++|+|||+++
T Consensus 252 a~~Fl~~C~~~-~p~~Rpta~eLL~hpf~~~ 281 (313)
T KOG0198|consen 252 AKDFLRKCFKR-DPEKRPTAEELLEHPFLKQ 281 (313)
T ss_pred HHHHHHHHhhc-CcccCcCHHHHhhChhhhc
Confidence 99999999999 9999999999999999864
No 13
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.9e-49 Score=337.18 Aligned_cols=240 Identities=30% Similarity=0.450 Sum_probs=196.2
Q ss_pred CCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCC----HHHHHHHHhcCCCceeEeceeeeCC-CCcE
Q 040812 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN----PQELNILRQTNSPYIVKCHQIFTKP-SGEV 128 (300)
Q Consensus 54 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~----~~E~~~l~~l~h~niv~~~~~~~~~-~~~~ 128 (300)
...+.|+.+++||+|+||.||+|++..+|+.||+|.+..+.....+ .+||.+|+++.||||+++.+..... .+.+
T Consensus 114 r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~si 193 (560)
T KOG0600|consen 114 RRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSI 193 (560)
T ss_pred cchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceE
Confidence 3456799999999999999999999999999999999877655544 6899999999999999999998765 5689
Q ss_pred EEEEeccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccceee--------
Q 040812 129 SILMEYMDAGSLEIYVKSR-GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCL-------- 199 (300)
Q Consensus 129 ~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~~-------- 199 (300)
|||+|||++ +|.-++... -+|++.+++.+++||+.||.|+|.+||+|||||.+||||+.++..+++++++
T Consensus 194 YlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~ 272 (560)
T KOG0600|consen 194 YLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSG 272 (560)
T ss_pred EEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCC
Confidence 999999998 888888764 4799999999999999999999999999999999999999998876655444
Q ss_pred ------------ccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCC------C
Q 040812 200 ------------YESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPS------L 261 (300)
Q Consensus 200 ------------~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~------~ 261 (300)
|.+||.... ...|+.++|+||.||||.||++|++.|.+.++...+..+. ..+...... +
T Consensus 273 ~~~~T~rVvTLWYRpPELLLG--~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIf-klcGSP~e~~W~~~kL 349 (560)
T KOG0600|consen 273 SAPYTSRVVTLWYRPPELLLG--ATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIF-KLCGSPTEDYWPVSKL 349 (560)
T ss_pred CcccccceEEeeccChHHhcC--CcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHH-HHhCCCChhccccccC
Confidence 344444332 2467889999999999999999999997765543333332 222111111 1
Q ss_pred C-------------------CCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCC
Q 040812 262 P-------------------ECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLA 298 (300)
Q Consensus 262 ~-------------------~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~ 298 (300)
| ...++...+|+..+|.. ||.+|.|++++|+|+||.
T Consensus 350 P~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~l-dP~kR~tA~~aL~seyF~ 404 (560)
T KOG0600|consen 350 PHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSL-DPDKRGTASSALQSEYFT 404 (560)
T ss_pred CcccccCCCCcccchHHHHhccCCHHHHHHHHHHhcc-CccccccHHHHhcCcccc
Confidence 1 12367788999999999 999999999999999994
No 14
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=2e-48 Score=319.03 Aligned_cols=242 Identities=25% Similarity=0.348 Sum_probs=196.5
Q ss_pred CCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCC----HHHHHHHHhcCCCceeEeceeeeCC-CCcE
Q 040812 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN----PQELNILRQTNSPYIVKCHQIFTKP-SGEV 128 (300)
Q Consensus 54 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~----~~E~~~l~~l~h~niv~~~~~~~~~-~~~~ 128 (300)
..++.|+.+..|++|+||.||+|+++.|++.||+|.++-+....-| ++||.+|.+.+|||||.+-++.... .+.+
T Consensus 73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~i 152 (419)
T KOG0663|consen 73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKI 152 (419)
T ss_pred ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccccee
Confidence 4567899999999999999999999999999999999876655444 7999999999999999998886533 2469
Q ss_pred EEEEeccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccceee--------
Q 040812 129 SILMEYMDAGSLEIYVKSR-GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCL-------- 199 (300)
Q Consensus 129 ~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~~-------- 199 (300)
|+|||||+. +|..++..- .+|...+++.++.|++.|++|||...|+|||||++|+|++..+..+++++++
T Consensus 153 y~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~ 231 (419)
T KOG0663|consen 153 YIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPL 231 (419)
T ss_pred eeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCc
Confidence 999999998 999999864 4899999999999999999999999999999999999999987765544433
Q ss_pred -----------ccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCC-----------
Q 040812 200 -----------YESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFRE----------- 257 (300)
Q Consensus 200 -----------~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~----------- 257 (300)
|.+||.... ...|+.++||||+|||+.||+++++.|.+.........+........
T Consensus 232 k~~T~lVVTLWYRaPELLLG--~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp 309 (419)
T KOG0663|consen 232 KPYTPLVVTLWYRAPELLLG--AKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELP 309 (419)
T ss_pred ccCcceEEEeeecCHHHhcC--CcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccc
Confidence 344443332 34678899999999999999999999977665544444433221110
Q ss_pred ---------------CCCCCCC-CChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 258 ---------------PPSLPEC-SSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 258 ---------------~~~~~~~-~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
...++.. +++...+|+..+|.. ||.+|.|++|.|+|+||.+
T Consensus 310 ~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~-dP~kR~tA~~~L~h~~F~e 366 (419)
T KOG0663|consen 310 AVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTY-DPGKRITAEDGLKHEYFRE 366 (419)
T ss_pred hhhccccCCCCchhhhhhccccccchhHHHHHHHHhcc-CccccccHHHhhccccccc
Confidence 0112222 468899999999999 9999999999999999987
No 15
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=5.5e-48 Score=307.49 Aligned_cols=237 Identities=30% Similarity=0.446 Sum_probs=190.3
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC----CCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP----PNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILM 132 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~ 132 (300)
.+|...+.||+|.||.||+|++.++|+.||||.++.....+ ...+|++.|+.++|+||+.++++|.... .+.+|+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~-~l~lVf 80 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKS-NLSLVF 80 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCC-ceEEEE
Confidence 57889999999999999999999999999999998654332 3478999999999999999999998765 899999
Q ss_pred eccCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccceee------------
Q 040812 133 EYMDAGSLEIYVKSRG-RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCL------------ 199 (300)
Q Consensus 133 e~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~~------------ 199 (300)
||++. +|+..++++. .++..+++.++.++++||+|||++.|+||||||.|+|+++++..+++++++
T Consensus 81 Efm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~ 159 (318)
T KOG0659|consen 81 EFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQT 159 (318)
T ss_pred Eeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcccc
Confidence 99987 9999998754 589999999999999999999999999999999999999998765544333
Q ss_pred -------ccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCC------------
Q 040812 200 -------YESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPS------------ 260 (300)
Q Consensus 200 -------~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~------------ 260 (300)
|.+||.... ...|+..+||||.|||+.||+-|.+-|.+.++- +.+..+-.......+.
T Consensus 160 ~~V~TRWYRAPELLfG--sr~Yg~~VDmWavGCI~AELllr~P~fpG~sDi-dQL~~If~~LGTP~~~~WP~~~~lpdY~ 236 (318)
T KOG0659|consen 160 HQVVTRWYRAPELLFG--SRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDI-DQLSKIFRALGTPTPDQWPEMTSLPDYV 236 (318)
T ss_pred cceeeeeccChHHhcc--chhcCCcchhhhHHHHHHHHHccCCCCCCCchH-HHHHHHHHHcCCCCcccCccccccccHH
Confidence 444444332 245788999999999999999987666554433 3333332221111111
Q ss_pred ------------CCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 261 ------------LPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 261 ------------~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
+-...++++.||+..|+.. ||.+|++++|+++|+||+.
T Consensus 237 ~~~~~P~~~~~~lf~aas~d~ldLl~~m~~y-nP~~Rita~qaL~~~yf~~ 286 (318)
T KOG0659|consen 237 KIQQFPKPPLNNLFPAASSDALDLLSKMLTY-NPKKRITASQALKHPYFKS 286 (318)
T ss_pred HHhcCCCCccccccccccHHHHHHHHhhhcc-CchhcccHHHHhcchhhhc
Confidence 1122367789999999999 9999999999999999975
No 16
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.6e-48 Score=339.67 Aligned_cols=235 Identities=29% Similarity=0.496 Sum_probs=201.0
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEE
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSI 130 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~l 130 (300)
.+-|++++.||.|+-|.|-+|++..||+.+|||++.+.... ....+|+-+|+-+.|||+++++++|++.. ++|+
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~-~lyl 89 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQ-HLYL 89 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCc-eEEE
Confidence 45579999999999999999999999999999999765322 23468999999999999999999998765 8999
Q ss_pred EEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccceee-----------
Q 040812 131 LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCL----------- 199 (300)
Q Consensus 131 v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~~----------- 199 (300)
|+||++||.|++++..++++++.++.+++.||+.|+.|+|..+|+||||||+|+|++..+..++++++.
T Consensus 90 vlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLe 169 (786)
T KOG0588|consen 90 VLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLE 169 (786)
T ss_pred EEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccCCcccc
Confidence 999999999999999999999999999999999999999999999999999999999987765544333
Q ss_pred -------ccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHH
Q 040812 200 -------YESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDF 272 (300)
Q Consensus 200 -------~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 272 (300)
|.+||.... ..+.+.++||||.|||||.||||+.||.+ .+...++..+. .....+|..++.++++|
T Consensus 170 TSCGSPHYA~PEIV~G--~pYdG~~sDVWSCGVILfALLtG~LPFdD----dNir~LLlKV~-~G~f~MPs~Is~eaQdL 242 (786)
T KOG0588|consen 170 TSCGSPHYAAPEIVSG--RPYDGRPSDVWSCGVILFALLTGKLPFDD----DNIRVLLLKVQ-RGVFEMPSNISSEAQDL 242 (786)
T ss_pred ccCCCcccCCchhhcC--CCCCCCccccchhHHHHHHHHhCCCCCCC----ccHHHHHHHHH-cCcccCCCcCCHHHHHH
Confidence 444444321 23457799999999999999999999963 33444444444 45677889999999999
Q ss_pred HHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 273 IRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 273 i~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
|.+||.. ||++|+|.+||++|||+..
T Consensus 243 Lr~ml~V-Dp~~RiT~~eI~kHP~l~g 268 (786)
T KOG0588|consen 243 LRRMLDV-DPSTRITTEEILKHPFLSG 268 (786)
T ss_pred HHHHhcc-CccccccHHHHhhCchhhc
Confidence 9999999 9999999999999999864
No 17
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=5.6e-48 Score=335.33 Aligned_cols=232 Identities=30% Similarity=0.520 Sum_probs=203.5
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC----CCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP----PNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILM 132 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~ 132 (300)
++|.+.+.||+|+||.||+|+.+.+.+.||+|.+.+..... ...+|+++++.++||||+.++++|+... .+|+|.
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~-~~~vVt 80 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSA-HLWVVT 80 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccc-eEEEEe
Confidence 67999999999999999999999999999999986544332 2367999999999999999999999876 899999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCC-------------------
Q 040812 133 EYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHP------------------- 193 (300)
Q Consensus 133 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~------------------- 193 (300)
|||.| +|+.++.+.+.++++.++.++.++++||.|||+.+|+|||+||.|||++.++..+
T Consensus 81 e~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vlts 159 (808)
T KOG0597|consen 81 EYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTS 159 (808)
T ss_pred hhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCceeeee
Confidence 99987 9999999999999999999999999999999999999999999999999876543
Q ss_pred ccceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHH
Q 040812 194 CGYSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFI 273 (300)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 273 (300)
+-++..|++||..+ +..|+..+|+||+|||+|||++|++||... .+...+.. ....+...|...+..+..|+
T Consensus 160 ikGtPlYmAPElv~---e~pyd~~sDlWslGcilYE~~~G~PPF~a~----si~~Lv~~-I~~d~v~~p~~~S~~f~nfl 231 (808)
T KOG0597|consen 160 IKGTPLYMAPELVE---EQPYDHTSDLWSLGCILYELYVGQPPFYAR----SITQLVKS-ILKDPVKPPSTASSSFVNFL 231 (808)
T ss_pred ccCcccccCHHHHc---CCCccchhhHHHHHHHHHHHhcCCCCchHH----HHHHHHHH-HhcCCCCCcccccHHHHHHH
Confidence 23577789988876 778899999999999999999999999642 22233333 33566777888999999999
Q ss_pred HHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 274 RCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 274 ~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
+.+|.+ ||.+|.+..+++.|||.++
T Consensus 232 ~gLL~k-dP~~RltW~~Ll~HpF~k~ 256 (808)
T KOG0597|consen 232 QGLLIK-DPAQRLTWTDLLGHPFWKG 256 (808)
T ss_pred HHHhhc-ChhhcccHHHHhcChHHhh
Confidence 999999 9999999999999999864
No 18
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.2e-47 Score=329.59 Aligned_cols=233 Identities=26% Similarity=0.421 Sum_probs=194.1
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCC-----CCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG-----TPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv 131 (300)
++|++.+.||+|+||.||+|.+..+++.||+|++..... ...+.+|+.++++++||||+++++++.+.. ..|+|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~lv 79 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQR-FLYML 79 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCC-eEEEE
Confidence 468999999999999999999999999999999865321 123467999999999999999999887654 89999
Q ss_pred EeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc---------------
Q 040812 132 MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY--------------- 196 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~--------------- 196 (300)
|||+++++|.+++...+.+++..+..++.||+.||.|||++|++||||||+|||++.++...+.+
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~ 159 (291)
T cd05612 80 MEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTLC 159 (291)
T ss_pred EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCCccccc
Confidence 99999999999999888899999999999999999999999999999999999998876543322
Q ss_pred -eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHH
Q 040812 197 -SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275 (300)
Q Consensus 197 -~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 275 (300)
+..|.+||... +..++.++|||||||++|+|+||+.||...... .....+. .....++...++.++++|.+
T Consensus 160 gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~----~~~~~i~-~~~~~~~~~~~~~~~~li~~ 231 (291)
T cd05612 160 GTPEYLAPEVIQ---SKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF----GIYEKIL-AGKLEFPRHLDLYAKDLIKK 231 (291)
T ss_pred CChhhcCHHHHc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHH-hCCcCCCccCCHHHHHHHHH
Confidence 23455666543 445678999999999999999999999764332 2222222 23455677789999999999
Q ss_pred HhccCCCCCCCC-----HHHHhcCCCCCC
Q 040812 276 CLQKGDPSKRWT-----ASQLLSHPFLAD 299 (300)
Q Consensus 276 ~l~~~dp~~Rpt-----~~~~l~hpw~~~ 299 (300)
||+. ||.+|++ ++++++||||+.
T Consensus 232 ~l~~-dp~~R~~~~~~~~~~~l~h~~~~~ 259 (291)
T cd05612 232 LLVV-DRTRRLGNMKNGADDVKNHRWFKS 259 (291)
T ss_pred HcCC-CHHHccCCccCCHHHHhcCccccC
Confidence 9999 9999995 999999999975
No 19
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6e-48 Score=336.04 Aligned_cols=236 Identities=31% Similarity=0.481 Sum_probs=200.7
Q ss_pred CCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC--CCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEE
Q 040812 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP--PNPQELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 54 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv 131 (300)
+....|...++||+|..|.||.|+...+++.||||.+....... ...+|+.+|+..+|+|||.+++.|...+ .+|+|
T Consensus 270 dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~d-eLWVV 348 (550)
T KOG0578|consen 270 DPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGD-ELWVV 348 (550)
T ss_pred ChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccc-eeEEE
Confidence 45567888999999999999999999999999999987655443 3478999999999999999999988764 89999
Q ss_pred EeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcc----------------
Q 040812 132 MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG---------------- 195 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~---------------- 195 (300)
|||++||+|.+.+... .+++.++..|++.+++||.|||.+||+|||||.+|||++.++..+++
T Consensus 349 MEym~ggsLTDvVt~~-~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~ 427 (550)
T KOG0578|consen 349 MEYMEGGSLTDVVTKT-RMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRS 427 (550)
T ss_pred EeecCCCchhhhhhcc-cccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccCccc
Confidence 9999999999998765 59999999999999999999999999999999999999988765443
Q ss_pred ---ceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCC--CCCCCCChHHH
Q 040812 196 ---YSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPP--SLPECSSEKFR 270 (300)
Q Consensus 196 ---~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~ 270 (300)
++..|++||... ...|++++||||||++++||+-|++||...+.. ..++.+..+..+ ..++.+++.++
T Consensus 428 TmVGTPYWMAPEVvt---rk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Pl----rAlyLIa~ng~P~lk~~~klS~~~k 500 (550)
T KOG0578|consen 428 TMVGTPYWMAPEVVT---RKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPL----RALYLIATNGTPKLKNPEKLSPELK 500 (550)
T ss_pred cccCCCCccchhhhh---hcccCccccchhhhhHHHHHhcCCCCccCCChH----HHHHHHhhcCCCCcCCccccCHHHH
Confidence 344566766655 446889999999999999999999999764332 333333334444 45778999999
Q ss_pred HHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 271 DFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 271 ~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
||+.+||+. |+++|+++.|+|+||||+.
T Consensus 501 dFL~~cL~~-dv~~RasA~eLL~HpFl~~ 528 (550)
T KOG0578|consen 501 DFLDRCLVV-DVEQRASAKELLEHPFLKM 528 (550)
T ss_pred HHHHHHhhc-chhcCCCHHHHhcChhhhh
Confidence 999999999 9999999999999999964
No 20
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.5e-49 Score=315.21 Aligned_cols=226 Identities=31% Similarity=0.461 Sum_probs=193.5
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC----CCHHHHHHHHhcCCCceeEece-eeeCCCCcEE
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP----PNPQELNILRQTNSPYIVKCHQ-IFTKPSGEVS 129 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~E~~~l~~l~h~niv~~~~-~~~~~~~~~~ 129 (300)
.+.+|+++++||+|+||.||++....+|+.+|.|.++-+.... ....|+.+|++++|||||++++ .+..++.-++
T Consensus 17 ~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evln 96 (375)
T KOG0591|consen 17 TLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLN 96 (375)
T ss_pred cHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhH
Confidence 3567999999999999999999999999999999987444332 2356999999999999999999 4555443499
Q ss_pred EEEeccCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHhHh--CC--ccccCCCCCceeecCCCCCCccce----
Q 040812 130 ILMEYMDAGSLEIYVKS----RGRLSEDIICTISRQVLKGLFYMHS--RN--IVHRDIKPANVLINEKMEHPCGYS---- 197 (300)
Q Consensus 130 lv~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~lH~--~~--i~H~Dlkp~Nill~~~~~~~~~~~---- 197 (300)
||||||.+|+|.++++. +..+++..++.++.|++.||.++|. .. |+||||||.||+++.++..+.|++
T Consensus 97 ivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r 176 (375)
T KOG0591|consen 97 IVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGR 176 (375)
T ss_pred HHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHh
Confidence 99999999999999974 4569999999999999999999998 44 999999999999999988766653
Q ss_pred ---------------eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCC
Q 040812 198 ---------------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLP 262 (300)
Q Consensus 198 ---------------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (300)
..|+.||... +..|+.+|||||+||++|||+.-.+||.+. ++.+....+..+..+.+|
T Consensus 177 ~l~s~~tfA~S~VGTPyYMSPE~i~---~~~Y~~kSDiWslGCllyEMcaL~~PF~g~----n~~~L~~KI~qgd~~~~p 249 (375)
T KOG0591|consen 177 FLSSKTTFAHSLVGTPYYMSPERIH---ESGYNFKSDIWSLGCLLYEMCALQSPFYGD----NLLSLCKKIEQGDYPPLP 249 (375)
T ss_pred HhcchhHHHHhhcCCCcccCHHHHh---cCCCCcchhHHHHHHHHHHHHhcCCCcccc----cHHHHHHHHHcCCCCCCc
Confidence 4455655544 667889999999999999999999999764 666777778878777788
Q ss_pred -CCCChHHHHHHHHHhccCCCCCCCCH
Q 040812 263 -ECSSEKFRDFIRCCLQKGDPSKRWTA 288 (300)
Q Consensus 263 -~~~~~~l~~li~~~l~~~dp~~Rpt~ 288 (300)
+.+|.++.++|..|+.. ||+.||+.
T Consensus 250 ~~~YS~~l~~li~~ci~v-d~~~RP~t 275 (375)
T KOG0591|consen 250 DEHYSTDLRELINMCIAV-DPEQRPDT 275 (375)
T ss_pred HHHhhhHHHHHHHHHccC-CcccCCCc
Confidence 78899999999999999 99999985
No 21
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.9e-47 Score=333.69 Aligned_cols=235 Identities=28% Similarity=0.435 Sum_probs=196.4
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCC-----CCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEE
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG-----TPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVS 129 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 129 (300)
.+++|++.+.||+|+||.||+|+++.+++.||+|+++.... .....+|+.++++++||||+++++++..+. ..|
T Consensus 16 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~ 94 (329)
T PTZ00263 16 KLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDEN-RVY 94 (329)
T ss_pred CchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCC-EEE
Confidence 35789999999999999999999999999999999875421 123457999999999999999999998765 899
Q ss_pred EEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-------------
Q 040812 130 ILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY------------- 196 (300)
Q Consensus 130 lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~------------- 196 (300)
+||||+.+++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++...+++
T Consensus 95 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 174 (329)
T PTZ00263 95 FLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFT 174 (329)
T ss_pred EEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCcce
Confidence 9999999999999999888899999999999999999999999999999999999999876554332
Q ss_pred ---eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHH
Q 040812 197 ---SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFI 273 (300)
Q Consensus 197 ---~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 273 (300)
+..|.+||... +..++.++|||||||++|||+||..||...... .....+. .....+|...+..+++||
T Consensus 175 ~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~elltg~~pf~~~~~~----~~~~~i~-~~~~~~p~~~~~~~~~li 246 (329)
T PTZ00263 175 LCGTPEYLAPEVIQ---SKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPF----RIYEKIL-AGRLKFPNWFDGRARDLV 246 (329)
T ss_pred ecCChhhcCHHHHc---CCCCCCcceeechHHHHHHHHcCCCCCCCCCHH----HHHHHHh-cCCcCCCCCCCHHHHHHH
Confidence 22355565543 455678999999999999999999999654321 2222222 334566777899999999
Q ss_pred HHHhccCCCCCCCC-----HHHHhcCCCCCC
Q 040812 274 RCCLQKGDPSKRWT-----ASQLLSHPFLAD 299 (300)
Q Consensus 274 ~~~l~~~dp~~Rpt-----~~~~l~hpw~~~ 299 (300)
.+||+. ||++|++ ++++++||||++
T Consensus 247 ~~~L~~-dP~~R~~~~~~~~~~ll~hp~f~~ 276 (329)
T PTZ00263 247 KGLLQT-DHTKRLGTLKGGVADVKNHPYFHG 276 (329)
T ss_pred HHHhhc-CHHHcCCCCCCCHHHHhcCCccCC
Confidence 999999 9999997 799999999976
No 22
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-47 Score=335.06 Aligned_cols=237 Identities=26% Similarity=0.358 Sum_probs=201.5
Q ss_pred cCCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCC-----CHHHHHHHHhc-CCCceeEeceeeeCCCC
Q 040812 53 IDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPP-----NPQELNILRQT-NSPYIVKCHQIFTKPSG 126 (300)
Q Consensus 53 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-----~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 126 (300)
..++++|.++++||+|+||+|+++..+.+++.+|||+++++..... ...|.+++..+ +||.++.++.+|.+..
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~- 442 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE- 442 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCC-
Confidence 4578899999999999999999999999999999999998765432 24577777766 5999999999999875
Q ss_pred cEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc----------
Q 040812 127 EVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY---------- 196 (300)
Q Consensus 127 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~---------- 196 (300)
++|+||||+.||++..+ ...+.|++..++.++..++.||.|||++|||+||||.+|||+|.+|..++.+
T Consensus 443 ~l~fvmey~~Ggdm~~~-~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~ 521 (694)
T KOG0694|consen 443 HLFFVMEYVAGGDLMHH-IHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQ 521 (694)
T ss_pred eEEEEEEecCCCcEEEE-EecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCCC
Confidence 99999999999994433 3446899999999999999999999999999999999999999887754332
Q ss_pred ---------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCCh
Q 040812 197 ---------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSE 267 (300)
Q Consensus 197 ---------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (300)
+.-|.+||... +..|+.++|+|||||+|||||+|+.||.+.+++..+..++ ...+.+|..++.
T Consensus 522 g~~TsTfCGTpey~aPEil~---e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~-----~d~~~yP~~ls~ 593 (694)
T KOG0694|consen 522 GDRTSTFCGTPEFLAPEVLT---EQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIV-----NDEVRYPRFLSK 593 (694)
T ss_pred CCccccccCChhhcChhhhc---cCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHh-----cCCCCCCCcccH
Confidence 34456666554 6789999999999999999999999998776654444443 567888999999
Q ss_pred HHHHHHHHHhccCCCCCCCC-----HHHHhcCCCCCCC
Q 040812 268 KFRDFIRCCLQKGDPSKRWT-----ASQLLSHPFLADA 300 (300)
Q Consensus 268 ~l~~li~~~l~~~dp~~Rpt-----~~~~l~hpw~~~~ 300 (300)
+..++|+++|.+ ||++|.. +++|.+||||+++
T Consensus 594 ea~~il~~ll~k-~p~kRLG~~e~d~~~i~~hpFFr~i 630 (694)
T KOG0694|consen 594 EAIAIMRRLLRK-NPEKRLGSGERDAEDIKKHPFFRSI 630 (694)
T ss_pred HHHHHHHHHhcc-CcccccCCCCCCchhhhhCCccccC
Confidence 999999999999 9999996 5899999999874
No 23
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=2.1e-46 Score=330.25 Aligned_cols=239 Identities=46% Similarity=0.856 Sum_probs=193.1
Q ss_pred CCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEE
Q 040812 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSI 130 (300)
Q Consensus 54 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~l 130 (300)
..+++|+.++.||+|+||.||+|.+..+++.||+|++...... ..+.+|+.++++++|+||+++++++.... ..|+
T Consensus 71 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~l 149 (353)
T PLN00034 71 KSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNG-EIQV 149 (353)
T ss_pred CCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCC-eEEE
Confidence 3567899999999999999999999999999999998654322 23467999999999999999999987654 8999
Q ss_pred EEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc--------------
Q 040812 131 LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY-------------- 196 (300)
Q Consensus 131 v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~-------------- 196 (300)
||||+++++|... ...++..+..++.||+.||.|||++||+||||||+|||++.++...+.+
T Consensus 150 v~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~ 225 (353)
T PLN00034 150 LLEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPC 225 (353)
T ss_pred EEecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccccccc
Confidence 9999999998643 2457788899999999999999999999999999999999876543222
Q ss_pred -----eeeccccccccc--cCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHH
Q 040812 197 -----SCLYESGEARHR--KHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269 (300)
Q Consensus 197 -----~~~~~~~~~~~~--~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 269 (300)
+..|.+||.... ..+.+.+.++|||||||++|||++|+.||.... ..++......+.....+..+...+.++
T Consensus 226 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l 304 (353)
T PLN00034 226 NSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGR-QGDWASLMCAICMSQPPEAPATASREF 304 (353)
T ss_pred cccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCC-CccHHHHHHHHhccCCCCCCCccCHHH
Confidence 234566665432 123455679999999999999999999997432 233344444444455566677789999
Q ss_pred HHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 270 RDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 270 ~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
++||.+||.. ||++|||+.|+++||||.+
T Consensus 305 ~~li~~~l~~-~P~~Rpt~~ell~hp~~~~ 333 (353)
T PLN00034 305 RHFISCCLQR-EPAKRWSAMQLLQHPFILR 333 (353)
T ss_pred HHHHHHHccC-ChhhCcCHHHHhcCccccc
Confidence 9999999999 9999999999999999975
No 24
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.2e-46 Score=316.57 Aligned_cols=239 Identities=31% Similarity=0.445 Sum_probs=196.5
Q ss_pred ccCCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhcCCCceeEeceeeeCCCC
Q 040812 52 EIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTNSPYIVKCHQIFTKPSG 126 (300)
Q Consensus 52 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 126 (300)
..-+++.|++++.||.|.-|+||+|+.+.++..+|+|++.+.... ....-|-.||..+.||.++.+|..|+.+.
T Consensus 72 ~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~- 150 (459)
T KOG0610|consen 72 GSLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDK- 150 (459)
T ss_pred CccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccc-
Confidence 344678899999999999999999999999999999999765432 22345999999999999999999999876
Q ss_pred cEEEEEeccCCCCHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcccee------
Q 040812 127 EVSILMEYMDAGSLEIYVKS--RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSC------ 198 (300)
Q Consensus 127 ~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~------ 198 (300)
+.|+|||||+||+|..++++ ...|++..++.++..++.||+|||-.||++|||||+||||.+++.....++.
T Consensus 151 ~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~ 230 (459)
T KOG0610|consen 151 YSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCP 230 (459)
T ss_pred eeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCC
Confidence 99999999999999999975 3469999999999999999999999999999999999999877553111000
Q ss_pred ---------------------------------------------------------------------ecccccccccc
Q 040812 199 ---------------------------------------------------------------------LYESGEARHRK 209 (300)
Q Consensus 199 ---------------------------------------------------------------------~~~~~~~~~~~ 209 (300)
-|.+|| ..
T Consensus 231 ~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPE---vI 307 (459)
T KOG0610|consen 231 VSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPE---VI 307 (459)
T ss_pred CCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccce---ee
Confidence 011111 11
Q ss_pred CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCC--CCChHHHHHHHHHhccCCCCCCCC
Q 040812 210 HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPE--CSSEKFRDFIRCCLQKGDPSKRWT 287 (300)
Q Consensus 210 ~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~li~~~l~~~dp~~Rpt 287 (300)
.|..-+.++|+|+|||++|||+.|..||.+.+..+.+.+++. .+..+|. ..+..++|||+++|.+ ||++|..
T Consensus 308 ~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~-----~~l~Fp~~~~vs~~akDLIr~LLvK-dP~kRlg 381 (459)
T KOG0610|consen 308 RGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVG-----QPLKFPEEPEVSSAAKDLIRKLLVK-DPSKRLG 381 (459)
T ss_pred ecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhc-----CCCcCCCCCcchhHHHHHHHHHhcc-Chhhhhc
Confidence 133335689999999999999999999999888877766663 3444444 4678999999999999 9999998
Q ss_pred ----HHHHhcCCCCCCC
Q 040812 288 ----ASQLLSHPFLADA 300 (300)
Q Consensus 288 ----~~~~l~hpw~~~~ 300 (300)
++||.+||||+++
T Consensus 382 ~~rGA~eIK~HpFF~gV 398 (459)
T KOG0610|consen 382 SKRGAAEIKRHPFFEGV 398 (459)
T ss_pred cccchHHhhcCccccCC
Confidence 9999999999875
No 25
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-47 Score=323.82 Aligned_cols=238 Identities=29% Similarity=0.502 Sum_probs=193.3
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC----------------CCCHHHHHHHHhcCCCceeEec
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT----------------PPNPQELNILRQTNSPYIVKCH 118 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----------------~~~~~E~~~l~~l~h~niv~~~ 118 (300)
.+++|++++.||+|.||.|-+|++..+++.||||++.+.... +...+|+.+|+++.|||||+|+
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 578999999999999999999999999999999999643211 1235799999999999999999
Q ss_pred eeeeCCC-CcEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-
Q 040812 119 QIFTKPS-GEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY- 196 (300)
Q Consensus 119 ~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~- 196 (300)
++..++. ..+|||+|||..|.+...-.....+++.+++.+++.++.||+|||.+||+||||||+|+|+++++..++++
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDF 254 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDF 254 (576)
T ss_pred EeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeecc
Confidence 9987653 46999999999888764433333499999999999999999999999999999999999999887764433
Q ss_pred -----------------------eeeccccccccccC-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHH
Q 040812 197 -----------------------SCLYESGEARHRKH-GGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLA 252 (300)
Q Consensus 197 -----------------------~~~~~~~~~~~~~~-~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~ 252 (300)
+..+.+||.-.... ..+.+.+.||||+||+||.|+.|+.||.+.....-+.+++
T Consensus 255 GVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIv-- 332 (576)
T KOG0585|consen 255 GVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIV-- 332 (576)
T ss_pred ceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHh--
Confidence 44455666544322 3345778999999999999999999997654433222222
Q ss_pred HhhCCCCCCCCC--CChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCC
Q 040812 253 ICFREPPSLPEC--SSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLA 298 (300)
Q Consensus 253 ~~~~~~~~~~~~--~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~ 298 (300)
+.+..+|.. ..+.++|+|.+||.+ ||++|.+..++..|||..
T Consensus 333 ---n~pL~fP~~pe~~e~~kDli~~lL~K-dP~~Ri~l~~ik~Hpwvt 376 (576)
T KOG0585|consen 333 ---NDPLEFPENPEINEDLKDLIKRLLEK-DPEQRITLPDIKLHPWVT 376 (576)
T ss_pred ---cCcccCCCcccccHHHHHHHHHHhhc-Chhheeehhhheecceec
Confidence 455566654 689999999999999 999999999999999985
No 26
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-47 Score=300.92 Aligned_cols=234 Identities=26% Similarity=0.415 Sum_probs=199.7
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCC-----CCCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEE
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDR-----GTPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVS 129 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 129 (300)
.+++|++++.||+|-||.||+|+.++++..||+|++.+.. ......+|+++..+++||||++++++|.++. .+|
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~-riy 98 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSK-RIY 98 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccc-eeE
Confidence 4678899999999999999999999999999999986543 2334578999999999999999999999876 899
Q ss_pred EEEeccCCCCHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-----------
Q 040812 130 ILMEYMDAGSLEIYVK--SRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY----------- 196 (300)
Q Consensus 130 lv~e~~~~~~L~~~l~--~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~----------- 196 (300)
+++||..+|+|...+. ...++++..+..++.|++.||.|+|.++|+||||||+|+|++..+..+++.
T Consensus 99 LilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~k 178 (281)
T KOG0580|consen 99 LILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSNK 178 (281)
T ss_pred EEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecCCCC
Confidence 9999999999999998 456799999999999999999999999999999999999999876654332
Q ss_pred ------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHH
Q 040812 197 ------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFR 270 (300)
Q Consensus 197 ------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (300)
+..|.+||..+ +...+..+|+|++|++.||++.|.+||........+.. .......+|..++.+++
T Consensus 179 R~tlcgt~dyl~pEmv~---~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkr-----I~k~~~~~p~~is~~a~ 250 (281)
T KOG0580|consen 179 RKTLCGTLDYLPPEMVE---GRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKR-----IRKVDLKFPSTISGGAA 250 (281)
T ss_pred ceeeecccccCCHhhcC---CCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHH-----HHHccccCCcccChhHH
Confidence 34455665544 55567899999999999999999999976553322222 22445677889999999
Q ss_pred HHHHHHhccCCCCCCCCHHHHhcCCCCC
Q 040812 271 DFIRCCLQKGDPSKRWTASQLLSHPFLA 298 (300)
Q Consensus 271 ~li~~~l~~~dp~~Rpt~~~~l~hpw~~ 298 (300)
|+|.+|+.. +|.+|.+..|++.|||+.
T Consensus 251 dlI~~ll~~-~p~~r~~l~~v~~hpwI~ 277 (281)
T KOG0580|consen 251 DLISRLLVK-NPIERLALTEVMDHPWIV 277 (281)
T ss_pred HHHHHHhcc-CccccccHHHHhhhHHHH
Confidence 999999999 999999999999999984
No 27
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-47 Score=328.82 Aligned_cols=233 Identities=24% Similarity=0.371 Sum_probs=199.2
Q ss_pred CCccCCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-CCCHHHHHHHHhcCCCceeEeceeeeCCCCcE
Q 040812 50 GQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-PPNPQELNILRQTNSPYIVKCHQIFTKPSGEV 128 (300)
Q Consensus 50 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 128 (300)
..+....+.+.+++.||+|.||.||+|.++.+ ..||+|.++..... ..+.+|+++|++|+|+|||++++++..+. .+
T Consensus 199 d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~-~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~-pi 276 (468)
T KOG0197|consen 199 DPWEIPREELKLIRELGSGQFGEVWLGKWNGS-TKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQE-PI 276 (468)
T ss_pred CCeeecHHHHHHHHHhcCCccceEEEEEEcCC-CcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCC-ce
Confidence 44445566788899999999999999999863 47899999875544 67789999999999999999999998765 89
Q ss_pred EEEEeccCCCCHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccceee-------
Q 040812 129 SILMEYMDAGSLEIYVKS--RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCL------- 199 (300)
Q Consensus 129 ~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~~------- 199 (300)
||||||++.|+|.++++. +..+.......++.||+.|++||+++++|||||.++|||++++..++++++++
T Consensus 277 yIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~ 356 (468)
T KOG0197|consen 277 YIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDD 356 (468)
T ss_pred EEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCC
Confidence 999999999999999987 45789999999999999999999999999999999999999988776665554
Q ss_pred -------------ccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCC
Q 040812 200 -------------YESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265 (300)
Q Consensus 200 -------------~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (300)
|.+||+.. -+.++.+||||||||+||||+| |+.||.+... .+.+..+..+.....|..+
T Consensus 357 ~Y~~~~~~kfPIkWtAPEa~~---~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn----~ev~~~le~GyRlp~P~~C 429 (468)
T KOG0197|consen 357 EYTASEGGKFPIKWTAPEALN---YGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSN----EEVLELLERGYRLPRPEGC 429 (468)
T ss_pred ceeecCCCCCCceecCHHHHh---hCCcccccceeehhhhHHHHhccCCCCCCCCCH----HHHHHHHhccCcCCCCCCC
Confidence 34444443 3346779999999999999998 8999965433 3566677778899999999
Q ss_pred ChHHHHHHHHHhccCCCCCCCCHHHHh
Q 040812 266 SEKFRDFIRCCLQKGDPSKRWTASQLL 292 (300)
Q Consensus 266 ~~~l~~li~~~l~~~dp~~Rpt~~~~l 292 (300)
++.+.++|..||.. +|++|||++.+.
T Consensus 430 P~~vY~lM~~CW~~-~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 430 PDEVYELMKSCWHE-DPEDRPTFETLR 455 (468)
T ss_pred CHHHHHHHHHHhhC-CcccCCCHHHHH
Confidence 99999999999999 999999998664
No 28
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=8.5e-46 Score=319.85 Aligned_cols=241 Identities=27% Similarity=0.372 Sum_probs=185.8
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC---CCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEE
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP---PNPQELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv 131 (300)
..++|++.+.||+|+||.||+|++..+++.||+|++....... ...+|+.++++++||||+++++++.... ..|+|
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~lv 81 (303)
T cd07869 3 KADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKE-TLTLV 81 (303)
T ss_pred ccccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCC-eEEEE
Confidence 3578999999999999999999999999999999987543222 3467999999999999999999988765 89999
Q ss_pred EeccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce-------------
Q 040812 132 MEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS------------- 197 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~------------- 197 (300)
|||+.+ +|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++..+++++
T Consensus 82 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 160 (303)
T cd07869 82 FEYVHT-DLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTY 160 (303)
T ss_pred EECCCc-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCccC
Confidence 999965 77777765 356899999999999999999999999999999999999988765433222
Q ss_pred ------eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCC-------------
Q 040812 198 ------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREP------------- 258 (300)
Q Consensus 198 ------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~------------- 258 (300)
..|.+||.... ...++.++|||||||++|+|+||..||....+.......+........
T Consensus 161 ~~~~~~~~y~aPE~~~~--~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (303)
T cd07869 161 SNEVVTLWYRPPDVLLG--STEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHF 238 (303)
T ss_pred CCCcccCCCCChHHHcC--CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcccc
Confidence 23555554321 234677999999999999999999999764332222211111100000
Q ss_pred --CC----CC---------CCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCCC
Q 040812 259 --PS----LP---------ECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300 (300)
Q Consensus 259 --~~----~~---------~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~~ 300 (300)
.. .+ ...++.+.+|+.+||+. ||++|||+.++++||||+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~-dp~~R~s~~~~l~h~~f~~~ 294 (303)
T cd07869 239 KPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQC-FPKNRLSAQAALSHEYFSDL 294 (303)
T ss_pred ccccccccCCccHHHHhhccCCChHHHHHHHHHhcc-CchhccCHHHHhcCcccccC
Confidence 00 00 01346789999999999 99999999999999999864
No 29
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-46 Score=317.03 Aligned_cols=240 Identities=34% Similarity=0.491 Sum_probs=199.8
Q ss_pred CCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC---CCHHHHHHHHhcCCCceeEeceeeeCCCCcEEE
Q 040812 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP---PNPQELNILRQTNSPYIVKCHQIFTKPSGEVSI 130 (300)
Q Consensus 54 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~l 130 (300)
.+.+.|++...||.|..+.||+|+...++..||||++..+.-.. ...+|+..|+.++||||+.++..|..+. .+|+
T Consensus 23 ~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~-~LWv 101 (516)
T KOG0582|consen 23 LNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDS-ELWV 101 (516)
T ss_pred CCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecc-eeEE
Confidence 35678999999999999999999999999999999997654333 3467999999999999999999999876 8999
Q ss_pred EEeccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcc-------------
Q 040812 131 LMEYMDAGSLEIYVKSR--GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG------------- 195 (300)
Q Consensus 131 v~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~------------- 195 (300)
||.||.+|++.++++.. ..+++..+..|+++++.||.|||.+|.+|||||+.||||+.+|..+++
T Consensus 102 VmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~ 181 (516)
T KOG0582|consen 102 VMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGD 181 (516)
T ss_pred eehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccCc
Confidence 99999999999999863 248999999999999999999999999999999999999998776443
Q ss_pred ----------ceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCC----
Q 040812 196 ----------YSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL---- 261 (300)
Q Consensus 196 ----------~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~---- 261 (300)
++..|++||..-... ..|+.|+||||||++..||.+|..||..... ++.+.....+.++..
T Consensus 182 R~~~rf~tfvgtp~wmAPEvl~q~~-~GYdfKaDIwSfGITA~ELA~G~aPf~k~pP----mkvLl~tLqn~pp~~~t~~ 256 (516)
T KOG0582|consen 182 RQVTRFNTFVGTPCWMAPEVLMQQL-HGYDFKADIWSFGITACELAHGHAPFSKYPP----MKVLLLTLQNDPPTLLTSG 256 (516)
T ss_pred eeeEeeccccCcccccChHHhhhcc-cCccchhhhhhhhHHHHHHhcCCCCcccCCh----HHHHHHHhcCCCCCccccc
Confidence 345577888754333 3467799999999999999999999965333 344444444555421
Q ss_pred -----CCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCCC
Q 040812 262 -----PECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300 (300)
Q Consensus 262 -----~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~~ 300 (300)
....+..++++|..||++ ||.+|||++++|+|+||+.+
T Consensus 257 ~~~d~~k~~~ksf~e~i~~CL~k-DP~kRptAskLlkh~FFk~~ 299 (516)
T KOG0582|consen 257 LDKDEDKKFSKSFREMIALCLVK-DPSKRPTASKLLKHAFFKKA 299 (516)
T ss_pred CChHHhhhhcHHHHHHHHHHhhc-CcccCCCHHHHhccHHHhhc
Confidence 123466799999999999 99999999999999999753
No 30
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.2e-45 Score=316.70 Aligned_cols=238 Identities=27% Similarity=0.382 Sum_probs=186.4
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEE
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv 131 (300)
.+++|++.+.||+|+||.||+|.+..+++.||+|.++..... ....+|+.++++++||||+++++++.... ..++|
T Consensus 3 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~lv 81 (288)
T cd07871 3 KLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTER-CLTLV 81 (288)
T ss_pred ccccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCC-eEEEE
Confidence 467899999999999999999999999999999998754322 23468999999999999999999988754 89999
Q ss_pred EeccCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc--------------
Q 040812 132 MEYMDAGSLEIYVKSRG-RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY-------------- 196 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~-------------- 196 (300)
|||+++ +|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++.++...+++
T Consensus 82 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~ 160 (288)
T cd07871 82 FEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTY 160 (288)
T ss_pred EeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCccc
Confidence 999976 8998887644 579999999999999999999999999999999999998876543322
Q ss_pred -----eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCC--------------
Q 040812 197 -----SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFRE-------------- 257 (300)
Q Consensus 197 -----~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~-------------- 257 (300)
+..|.+||... .+..++.++|||||||++|+|+||+.||...+.......+........
T Consensus 161 ~~~~~~~~y~aPE~~~--~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T cd07871 161 SNEVVTLWYRPPDVLL--GSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFR 238 (288)
T ss_pred cCceecccccChHHhc--CCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhh
Confidence 22345555432 124567899999999999999999999976543322221111110000
Q ss_pred ---CC--------CCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 258 ---PP--------SLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 258 ---~~--------~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
.+ ......++++.+||.+||+. ||++|||++|+++||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~-dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 239 SYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLY-ETKSRISAEAALRHSYF 288 (288)
T ss_pred ccccCccCCCchHHhCCCCCHHHHHHHHHhcCc-CcccCCCHHHHhcCCCC
Confidence 00 00123577899999999999 99999999999999998
No 31
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-48 Score=305.62 Aligned_cols=238 Identities=27% Similarity=0.380 Sum_probs=198.0
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCC----CCCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEE
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDR----GTPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv 131 (300)
.++|++-+.||+|.|+.|+++.+..+|+.+|+|++.... ..+...+|+.+.+.++||||+++++.+..+ +..|+|
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~-~~~ylv 88 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE-SFHYLV 88 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhccc-ceeEEE
Confidence 357899999999999999999999999999999885432 223346799999999999999999998765 499999
Q ss_pred EeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCC-------------------
Q 040812 132 MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEH------------------- 192 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~------------------- 192 (300)
+|+++|++|..-+-.+.-+++..+...++||+.||.|+|.+||+|||+||+|+++.+....
T Consensus 89 Fe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~ 168 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEA 168 (355)
T ss_pred EecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCccc
Confidence 9999999998777666678999999999999999999999999999999999999764321
Q ss_pred --CccceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHH
Q 040812 193 --PCGYSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFR 270 (300)
Q Consensus 193 --~~~~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (300)
-..++..|.+||... ...++..+|||+-|||||-|+.|.+||.+.++. ...+.+.......+...++.++++.+
T Consensus 169 ~~G~~GtP~fmaPEvvr---kdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~-rlye~I~~g~yd~~~~~w~~is~~Ak 244 (355)
T KOG0033|consen 169 WHGFAGTPGYLSPEVLK---KDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-RLYEQIKAGAYDYPSPEWDTVTPEAK 244 (355)
T ss_pred cccccCCCcccCHHHhh---cCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH-HHHHHHhccccCCCCcccCcCCHHHH
Confidence 112344566666554 456888999999999999999999999875554 33344444444556667788999999
Q ss_pred HHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 271 DFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 271 ~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
+|+.+||.. ||++|+|+.|+|+|||+.+
T Consensus 245 ~LvrrML~~-dP~kRIta~EAL~HpWi~~ 272 (355)
T KOG0033|consen 245 SLIRRMLTV-NPKKRITADEALKHPWICN 272 (355)
T ss_pred HHHHHHhcc-ChhhhccHHHHhCCchhcc
Confidence 999999999 9999999999999999975
No 32
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=2.4e-46 Score=326.08 Aligned_cols=227 Identities=27% Similarity=0.431 Sum_probs=188.7
Q ss_pred eeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEeccCC
Q 040812 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDA 137 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~ 137 (300)
+.||+|+||.||+|+++.+++.||+|+++..... ....+|+.++++++||||+++++++.... ..|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~-~~~lv~e~~~~ 79 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHD-RLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCC-EEEEEEeCCCC
Confidence 4699999999999999999999999998754321 12356999999999999999999988765 89999999999
Q ss_pred CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-------------------ee
Q 040812 138 GSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY-------------------SC 198 (300)
Q Consensus 138 ~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~-------------------~~ 198 (300)
++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++...+.+ +.
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~ 159 (323)
T cd05571 80 GELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTP 159 (323)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecCc
Confidence 99999998888899999999999999999999999999999999999998876543322 23
Q ss_pred eccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHhc
Q 040812 199 LYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQ 278 (300)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 278 (300)
.|.+||... +..++.++|||||||++|||+||..||...+.. ..... .......++...++++.++|.+||.
T Consensus 160 ~y~aPE~~~---~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~----~~~~~-~~~~~~~~p~~~~~~~~~li~~~L~ 231 (323)
T cd05571 160 EYLAPEVLE---DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE----KLFEL-ILMEEIRFPRTLSPEAKSLLAGLLK 231 (323)
T ss_pred cccChhhhc---CCCCCccccCcccchhhhhhhcCCCCCCCCCHH----HHHHH-HHcCCCCCCCCCCHHHHHHHHHHcc
Confidence 355555543 456788999999999999999999999654322 22222 2233456777889999999999999
Q ss_pred cCCCCCCC-----CHHHHhcCCCCCC
Q 040812 279 KGDPSKRW-----TASQLLSHPFLAD 299 (300)
Q Consensus 279 ~~dp~~Rp-----t~~~~l~hpw~~~ 299 (300)
. ||++|| ++.++++||||.+
T Consensus 232 ~-dP~~R~~~~~~~~~~ll~h~~f~~ 256 (323)
T cd05571 232 K-DPKQRLGGGPEDAKEIMEHRFFAS 256 (323)
T ss_pred C-CHHHcCCCCCCCHHHHHcCCCcCC
Confidence 9 999999 8999999999975
No 33
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=9.6e-46 Score=316.98 Aligned_cols=236 Identities=27% Similarity=0.416 Sum_probs=185.6
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILM 132 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~ 132 (300)
++|++.+.||+|+||.||+|+++.+++.||+|+++..... ....+|+.++++++|+||+++++++.... ..|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~ 79 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRG-KLYLVF 79 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCC-EEEEEE
Confidence 4699999999999999999999999999999998754322 23467999999999999999999988754 899999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc----------------
Q 040812 133 EYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY---------------- 196 (300)
Q Consensus 133 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~---------------- 196 (300)
||++++++..+......+++..++.++.|++.||.|||+.|++||||||+||+++.++...+++
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 159 (287)
T cd07848 80 EYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYT 159 (287)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCccccccccccccc
Confidence 9999987776665556799999999999999999999999999999999999998776443222
Q ss_pred ----eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHh-----------hC-----
Q 040812 197 ----SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAIC-----------FR----- 256 (300)
Q Consensus 197 ----~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~-----------~~----- 256 (300)
+..|.+||... +..++.++|||||||++|||++|+.||...........+..... ..
T Consensus 160 ~~~~~~~y~aPE~~~---~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (287)
T cd07848 160 EYVATRWYRSPELLL---GAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHG 236 (287)
T ss_pred ccccccccCCcHHHc---CCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcc
Confidence 22345555543 44577899999999999999999999975433222211111000 00
Q ss_pred -CCC----------CCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 257 -EPP----------SLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 257 -~~~----------~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
..+ ......+..+.+||.+||+. ||++|||++++++||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~-~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 237 LRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKL-NPTDRYLTEQCLNHPAF 287 (287)
T ss_pred cccCcccCcccHHHhhhcccCHHHHHHHHHHccC-CcccCCCHHHHhcCCCC
Confidence 000 01123577899999999999 99999999999999998
No 34
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=8.7e-46 Score=317.09 Aligned_cols=237 Identities=22% Similarity=0.332 Sum_probs=192.0
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEE
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILM 132 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~ 132 (300)
.|++.+.||+|+||.||+|.+..+++.||+|.+...... ..+.+|+.++++++|+||+++++++.... ..++||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~-~~~lv~ 79 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKD-ALCLVL 79 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCC-eEEEEE
Confidence 478899999999999999999999999999998653321 12457999999999999999999988765 899999
Q ss_pred eccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc--------------
Q 040812 133 EYMDAGSLEIYVKSR--GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY-------------- 196 (300)
Q Consensus 133 e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~-------------- 196 (300)
||+++|+|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++...+.+
T Consensus 80 e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 159 (285)
T cd05631 80 TIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVR 159 (285)
T ss_pred EecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeec
Confidence 999999999887643 3589999999999999999999999999999999999998765443222
Q ss_pred ----eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHH
Q 040812 197 ----SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDF 272 (300)
Q Consensus 197 ----~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 272 (300)
+..|.+||... +..++.++|||||||++|||++|+.||........... +...........+...++++.+|
T Consensus 160 ~~~g~~~y~aPE~~~---~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~l 235 (285)
T cd05631 160 GRVGTVGYMAPEVIN---NEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREE-VDRRVKEDQEEYSEKFSEDAKSI 235 (285)
T ss_pred CCCCCCCccCHhhhc---CCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHH-HHHHhhcccccCCccCCHHHHHH
Confidence 23345555543 45678899999999999999999999976544322222 22222233445667789999999
Q ss_pred HHHHhccCCCCCCCC-----HHHHhcCCCCCCC
Q 040812 273 IRCCLQKGDPSKRWT-----ASQLLSHPFLADA 300 (300)
Q Consensus 273 i~~~l~~~dp~~Rpt-----~~~~l~hpw~~~~ 300 (300)
|.+||.. ||++||+ ++++++||||+++
T Consensus 236 i~~~l~~-~P~~R~~~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05631 236 CRMLLTK-NPKERLGCRGNGAAGVKQHPIFKNI 267 (285)
T ss_pred HHHHhhc-CHHHhcCCCCCCHHHHhcCHhhcCC
Confidence 9999999 9999997 8999999999864
No 35
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=2.7e-46 Score=327.08 Aligned_cols=238 Identities=25% Similarity=0.335 Sum_probs=191.8
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv 131 (300)
++|++.+.||+|+||.||+|++..+++.||+|+++..... ..+.+|+.++.+++||||+++++++.... ..|+|
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~-~~~lv 79 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDE-YLYLA 79 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCC-EEEEE
Confidence 4699999999999999999999999999999999754221 22457999999999999999999988755 89999
Q ss_pred EeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc---------------
Q 040812 132 MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY--------------- 196 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~--------------- 196 (300)
|||+++++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++...+.+
T Consensus 80 ~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~~ 159 (333)
T cd05600 80 MEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSVV 159 (333)
T ss_pred EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCcc
Confidence 99999999999998888899999999999999999999999999999999999998876543322
Q ss_pred -eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCC---CCCChHHHHH
Q 040812 197 -SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLP---ECSSEKFRDF 272 (300)
Q Consensus 197 -~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~l 272 (300)
+..|.+||... +..++.++|||||||++|||++|..||...........+.........+... ..+++++.++
T Consensus 160 gt~~y~aPE~~~---~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l 236 (333)
T cd05600 160 GSPDYMAPEVLR---GKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDL 236 (333)
T ss_pred cCccccChhHhc---CCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHH
Confidence 23355666543 4567889999999999999999999997544322222111110001111111 2458899999
Q ss_pred HHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 273 IRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 273 i~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
|.+||.. +|++||+++++++||||++
T Consensus 237 i~~~l~~-~~~rr~s~~~ll~h~~~~~ 262 (333)
T cd05600 237 ITKLIND-PSRRFGSLEDIKNHPFFKE 262 (333)
T ss_pred HHHHhhC-hhhhcCCHHHHHhCcccCC
Confidence 9999998 9999999999999999986
No 36
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-45 Score=320.16 Aligned_cols=235 Identities=25% Similarity=0.393 Sum_probs=195.9
Q ss_pred cCCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcE
Q 040812 53 IDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEV 128 (300)
Q Consensus 53 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 128 (300)
........+.+.||+|+||+||++.++.+ ..||+|.+...... ..+.+|+.+|.+++|||||+++|++..+.+..
T Consensus 37 ~i~~~~l~~~~~iG~G~~g~V~~~~~~g~-~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~ 115 (362)
T KOG0192|consen 37 EIDPDELPIEEVLGSGSFGTVYKGKWRGT-DVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSL 115 (362)
T ss_pred ecChHHhhhhhhcccCCceeEEEEEeCCc-eeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCce
Confidence 34455667778899999999999999853 23999998754322 25678999999999999999999998765468
Q ss_pred EEEEeccCCCCHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHhHhCC-ccccCCCCCceeecCCC-CCC-----------
Q 040812 129 SILMEYMDAGSLEIYVKS--RGRLSEDIICTISRQVLKGLFYMHSRN-IVHRDIKPANVLINEKM-EHP----------- 193 (300)
Q Consensus 129 ~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~~l~~lH~~~-i~H~Dlkp~Nill~~~~-~~~----------- 193 (300)
++||||+++|+|..++.. ...++...+..++.||+.||.|||+++ |+||||||+|||++.+. ..+
T Consensus 116 ~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~ 195 (362)
T KOG0192|consen 116 CIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKV 195 (362)
T ss_pred EEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeec
Confidence 999999999999999987 568999999999999999999999999 99999999999999875 322
Q ss_pred --------ccceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCC
Q 040812 194 --------CGYSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265 (300)
Q Consensus 194 --------~~~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (300)
.+++..|++||..... +..++.|+||||||+++|||+||+.||..... ..........+..+.+|..+
T Consensus 196 ~~~~~~~~~~GT~~wMAPEv~~~~-~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~---~~~~~~v~~~~~Rp~~p~~~ 271 (362)
T KOG0192|consen 196 ISKTSMTSVAGTYRWMAPEVLRGE-KSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP---VQVASAVVVGGLRPPIPKEC 271 (362)
T ss_pred cccccccCCCCCccccChhhhcCC-CCcCCccchhhhHHHHHHHHHHCCCCCCCCCH---HHHHHHHHhcCCCCCCCccC
Confidence 2345568888887754 56788999999999999999999999976543 11222223467778888889
Q ss_pred ChHHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 266 SEKFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 266 ~~~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
++.+..+|.+||.. ||++||++.+++.
T Consensus 272 ~~~l~~l~~~CW~~-dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 272 PPHLSSLMERCWLV-DPSRRPSFLEIVS 298 (362)
T ss_pred CHHHHHHHHHhCCC-CCCcCCCHHHHHH
Confidence 99999999999999 9999999998863
No 37
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=4.1e-46 Score=326.36 Aligned_cols=235 Identities=23% Similarity=0.345 Sum_probs=193.7
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCC-eEEEEEEeecCCC-----CCCCHHHHHHHHhcCCCceeEeceeeeCCCCcE
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTL-ALYALKVMQCDRG-----TPPNPQELNILRQTNSPYIVKCHQIFTKPSGEV 128 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~-~~vaiK~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 128 (300)
..++|++.+.||+|+||.||+|.+..++ ..||+|.+..... ...+.+|+.+++.++||||+++++++.... ..
T Consensus 28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~-~~ 106 (340)
T PTZ00426 28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDES-YL 106 (340)
T ss_pred ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCC-EE
Confidence 4678999999999999999999976654 7899999865322 122357999999999999999999998764 89
Q ss_pred EEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcc-------------
Q 040812 129 SILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG------------- 195 (300)
Q Consensus 129 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~------------- 195 (300)
|+||||+++|+|.+++.....+++..+..++.||+.||.|||++||+||||||+|||++.++...+.
T Consensus 107 ~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~~ 186 (340)
T PTZ00426 107 YLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRTY 186 (340)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCCcc
Confidence 9999999999999999988889999999999999999999999999999999999999887654322
Q ss_pred ---ceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHH
Q 040812 196 ---YSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDF 272 (300)
Q Consensus 196 ---~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 272 (300)
++..|.+||... +..++.++|||||||++|||+||..||...+.. .....+. .....+|...++.+.++
T Consensus 187 ~~~gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~----~~~~~i~-~~~~~~p~~~~~~~~~l 258 (340)
T PTZ00426 187 TLCGTPEYIAPEILL---NVGHGKAADWWTLGIFIYEILVGCPPFYANEPL----LIYQKIL-EGIIYFPKFLDNNCKHL 258 (340)
T ss_pred eecCChhhcCHHHHh---CCCCCccccccchhhHHHHHhcCCCCCCCCCHH----HHHHHHh-cCCCCCCCCCCHHHHHH
Confidence 123356666543 455678999999999999999999999754332 2222222 33445677789999999
Q ss_pred HHHHhccCCCCCCC-----CHHHHhcCCCCCC
Q 040812 273 IRCCLQKGDPSKRW-----TASQLLSHPFLAD 299 (300)
Q Consensus 273 i~~~l~~~dp~~Rp-----t~~~~l~hpw~~~ 299 (300)
|.+||+. ||++|+ +++++++||||++
T Consensus 259 i~~~l~~-dp~~R~~~~~~~~~~~~~hp~f~~ 289 (340)
T PTZ00426 259 MKKLLSH-DLTKRYGNLKKGAQNVKEHPWFGN 289 (340)
T ss_pred HHHHccc-CHHHcCCCCCCCHHHHHcCCCcCC
Confidence 9999999 999995 8999999999986
No 38
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=6.2e-46 Score=330.45 Aligned_cols=236 Identities=24% Similarity=0.320 Sum_probs=188.1
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv 131 (300)
+.|++++.||+|+||.||+|++..+++.||+|++...... ..+.+|+.++++++|+||+++++++.+.. ..|+|
T Consensus 1 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~-~~~lv 79 (381)
T cd05626 1 SMFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKD-NLYFV 79 (381)
T ss_pred CCceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCC-EEEEE
Confidence 3689999999999999999999999999999999754322 12357999999999999999999998755 89999
Q ss_pred EeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcc----------------
Q 040812 132 MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG---------------- 195 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~---------------- 195 (300)
|||+++|+|.+++...+.+++..++.++.||+.||.|||+.||+||||||+|||++.++...+.
T Consensus 80 ~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~ 159 (381)
T cd05626 80 MDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKY 159 (381)
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccccc
Confidence 9999999999999888889999999999999999999999999999999999999876543322
Q ss_pred --------------------------------------------------ceeeccccccccccCCCCCCchhhHHHHHH
Q 040812 196 --------------------------------------------------YSCLYESGEARHRKHGGYNGFAADIWSFGV 225 (300)
Q Consensus 196 --------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~ 225 (300)
++..|.+||... +..++.++|||||||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~~DiwSlG~ 236 (381)
T cd05626 160 YQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLL---RKGYTQLCDWWSVGV 236 (381)
T ss_pred ccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHc---CCCCCCccceeehhh
Confidence 223355555543 445678999999999
Q ss_pred HHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCC--CCCChHHHHHHHHHhcc-CCCCCCCCHHHHhcCCCCCC
Q 040812 226 TMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLP--ECSSEKFRDFIRCCLQK-GDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 226 il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~~l~~-~dp~~Rpt~~~~l~hpw~~~ 299 (300)
++|||+||..||...........+. ........+ ..+++++++||.+|+.. .++..|++++++++||||++
T Consensus 237 il~elltG~~Pf~~~~~~~~~~~i~---~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~ 310 (381)
T cd05626 237 ILFEMLVGQPPFLAPTPTETQLKVI---NWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSE 310 (381)
T ss_pred HHHHHHhCCCCCcCCCHHHHHHHHH---ccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCC
Confidence 9999999999997654332222221 111122222 35789999999995543 15666999999999999976
No 39
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=1.4e-45 Score=326.15 Aligned_cols=237 Identities=24% Similarity=0.358 Sum_probs=186.9
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv 131 (300)
++|++.+.||+|+||.||+|.+..+++.||+|++...... ....+|+.++.+++|+||+++++.+.+.. ..|+|
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~-~~~lv 79 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKL-NLYLI 79 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCC-eEEEE
Confidence 4689999999999999999999999999999999753221 12356999999999999999999998754 89999
Q ss_pred EeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc---------------
Q 040812 132 MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY--------------- 196 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~--------------- 196 (300)
||||++|+|.+++...+.+++..++.++.|++.||.|||++||+||||||+|||++.++...+.+
T Consensus 80 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~ 159 (363)
T cd05628 80 MEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEF 159 (363)
T ss_pred EcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCcccccccccccc
Confidence 99999999999998888899999999999999999999999999999999999998776543322
Q ss_pred ---------------------------------------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 040812 197 ---------------------------------------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPF 237 (300)
Q Consensus 197 ---------------------------------------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf 237 (300)
+..|.+||... +..++.++|||||||++|||++|+.||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~---~~~~~~~~DvwSlGvil~ell~G~~Pf 236 (363)
T cd05628 160 YRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFM---QTGYNKLCDWWSLGVIMYEMLIGYPPF 236 (363)
T ss_pred cccccccccccccccccccccccchhhhccccccccccCCccccCHHHHc---CCCCCCchhhhhhHHHHHHHHhCCCCC
Confidence 22344555443 455778999999999999999999999
Q ss_pred CCCCCCchHHHHHHHHhhCCCCCCCC--CCChHHHHHHHHHhcc-CCCCCCCCHHHHhcCCCCCCC
Q 040812 238 LEPGQEPDFLSLMLAICFREPPSLPE--CSSEKFRDFIRCCLQK-GDPSKRWTASQLLSHPFLADA 300 (300)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~li~~~l~~-~dp~~Rpt~~~~l~hpw~~~~ 300 (300)
...........+.. ......+|. ..+++++++|.+++.. .++..||+++|+++||||+++
T Consensus 237 ~~~~~~~~~~~i~~---~~~~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~hp~f~~~ 299 (363)
T cd05628 237 CSETPQETYKKVMN---WKETLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTNPFFEGV 299 (363)
T ss_pred CCCCHHHHHHHHHc---CcCcccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCCCCCCCC
Confidence 76443322222211 112222332 3688999999987642 133456899999999999863
No 40
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-45 Score=320.23 Aligned_cols=238 Identities=33% Similarity=0.420 Sum_probs=200.1
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC-----CCHHHHHHHHhcC-CCceeEeceeeeCCCCcE
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP-----PNPQELNILRQTN-SPYIVKCHQIFTKPSGEV 128 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 128 (300)
....|++.+.||+|.||.||+|+.+.+|+.+|+|++.+..... ...+|+.+|+++. |||||.+++.|++.. .+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~-~~ 111 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPD-SV 111 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCC-eE
Confidence 3457999999999999999999999999999999998765432 4478999999998 999999999999876 89
Q ss_pred EEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCC----C---Ccc------
Q 040812 129 SILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKME----H---PCG------ 195 (300)
Q Consensus 129 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~----~---~~~------ 195 (300)
++|||+|+||.|.+.+... .+++..+..++.||+.|++|||+.||+||||||+|+|+..... . ++|
T Consensus 112 ~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~ 190 (382)
T KOG0032|consen 112 YLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIK 190 (382)
T ss_pred EEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEcc
Confidence 9999999999999999876 4999999999999999999999999999999999999976532 1 122
Q ss_pred ---------ceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCC
Q 040812 196 ---------YSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSS 266 (300)
Q Consensus 196 ---------~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (300)
++..|.+||... +..++..+||||+||++|.|++|.+||...........+..... ......+..++
T Consensus 191 ~~~~~~~~~Gtp~y~APEvl~---~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~-~f~~~~w~~is 266 (382)
T KOG0032|consen 191 PGERLHTIVGTPEYVAPEVLG---GRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDF-DFTSEPWDDIS 266 (382)
T ss_pred CCceEeeecCCccccCchhhc---CCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCC-CCCCCCccccC
Confidence 234455555544 45688899999999999999999999988776655554333222 23444556789
Q ss_pred hHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 267 EKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 267 ~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
+.+++||..||.. ||.+|+|+.++|+|||+++
T Consensus 267 ~~akd~i~~ll~~-dp~~R~ta~~~L~HpWi~~ 298 (382)
T KOG0032|consen 267 ESAKDFIRKLLEF-DPRKRLTAAQALQHPWIKS 298 (382)
T ss_pred HHHHHHHHHhccc-CcccCCCHHHHhcCccccC
Confidence 9999999999999 9999999999999999975
No 41
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=9.1e-46 Score=320.92 Aligned_cols=225 Identities=26% Similarity=0.451 Sum_probs=186.7
Q ss_pred ecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEeccCCCC
Q 040812 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGS 139 (300)
Q Consensus 65 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~~~ 139 (300)
||+|+||.||+|++..+++.||+|+++..... ..+.+|+.++++++||||+++++++.... ..|+||||+++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~e~~~~g~ 79 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPE-KLYLVLAFINGGE 79 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCC-eEEEEEcCCCCCc
Confidence 79999999999999999999999998753211 22356999999999999999999988754 8999999999999
Q ss_pred HHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcc-------------------ceeec
Q 040812 140 LEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG-------------------YSCLY 200 (300)
Q Consensus 140 L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~-------------------~~~~~ 200 (300)
|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++...+. ++..|
T Consensus 80 L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y 159 (312)
T cd05585 80 LFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEY 159 (312)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCccc
Confidence 99999888889999999999999999999999999999999999999877554322 23335
Q ss_pred cccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHhccC
Q 040812 201 ESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKG 280 (300)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~ 280 (300)
.+||... +..++.++|||||||++|||+||..||...... ..... .......++...++.+.++|.+||..
T Consensus 160 ~aPE~~~---~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~- 230 (312)
T cd05585 160 LAPELLL---GHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVN----EMYRK-ILQEPLRFPDGFDRDAKDLLIGLLSR- 230 (312)
T ss_pred CCHHHHc---CCCCCCccceechhHHHHHHHhCCCCcCCCCHH----HHHHH-HHcCCCCCCCcCCHHHHHHHHHHcCC-
Confidence 5555543 455778999999999999999999999654322 22222 22445667788999999999999999
Q ss_pred CCCCCC---CHHHHhcCCCCCC
Q 040812 281 DPSKRW---TASQLLSHPFLAD 299 (300)
Q Consensus 281 dp~~Rp---t~~~~l~hpw~~~ 299 (300)
||++|| ++.++++||||++
T Consensus 231 dp~~R~~~~~~~e~l~hp~~~~ 252 (312)
T cd05585 231 DPTRRLGYNGAQEIKNHPFFSQ 252 (312)
T ss_pred CHHHcCCCCCHHHHHcCCCcCC
Confidence 999997 5899999999986
No 42
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=2.5e-45 Score=319.59 Aligned_cols=227 Identities=27% Similarity=0.443 Sum_probs=188.0
Q ss_pred eeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEeccCC
Q 040812 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDA 137 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~ 137 (300)
+.||+|+||.||++++..+++.||+|+++..... ..+.+|+.++++++||||+++++++.... ..|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~-~~~lv~E~~~~ 79 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD-RLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCC-EEEEEEeCCCC
Confidence 4699999999999999999999999998754321 12346999999999999999999988764 89999999999
Q ss_pred CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-------------------ee
Q 040812 138 GSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY-------------------SC 198 (300)
Q Consensus 138 ~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~-------------------~~ 198 (300)
|+|..++.....+++..++.++.||+.||.|||++||+||||||+|||++.++...+.+ +.
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~ 159 (323)
T cd05595 80 GELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTP 159 (323)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCCc
Confidence 99999998887899999999999999999999999999999999999998775543222 23
Q ss_pred eccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHhc
Q 040812 199 LYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQ 278 (300)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 278 (300)
.|.+||... +..++.++|||||||++|||+||+.||...+.. .....+ ......+|..+++++.++|.+||.
T Consensus 160 ~y~aPE~~~---~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~----~~~~~~-~~~~~~~p~~~~~~~~~li~~~L~ 231 (323)
T cd05595 160 EYLAPEVLE---DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE----RLFELI-LMEEIRFPRTLSPEAKSLLAGLLK 231 (323)
T ss_pred CcCCccccc---CCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH----HHHHHH-hcCCCCCCCCCCHHHHHHHHHHcc
Confidence 455555543 556788999999999999999999999754332 222222 133445677889999999999999
Q ss_pred cCCCCCCC-----CHHHHhcCCCCCC
Q 040812 279 KGDPSKRW-----TASQLLSHPFLAD 299 (300)
Q Consensus 279 ~~dp~~Rp-----t~~~~l~hpw~~~ 299 (300)
. ||++|+ ++.++++||||.+
T Consensus 232 ~-dP~~R~~~~~~~~~~~l~h~~~~~ 256 (323)
T cd05595 232 K-DPKQRLGGGPSDAKEVMEHRFFLS 256 (323)
T ss_pred C-CHHHhCCCCCCCHHHHHcCCCcCC
Confidence 9 999998 8999999999975
No 43
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=7.5e-46 Score=329.50 Aligned_cols=236 Identities=24% Similarity=0.313 Sum_probs=188.9
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCC-----CCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG-----TPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv 131 (300)
++|++++.||+|+||.||+|++..+++.||+|++..... .....+|+.++++++|+||+++++.+.... ..|+|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~-~~~lv 79 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKD-NLYFV 79 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-EEEEE
Confidence 479999999999999999999999999999999864321 122457999999999999999999998754 89999
Q ss_pred EeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc---------------
Q 040812 132 MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY--------------- 196 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~--------------- 196 (300)
||||++|+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++...+.+
T Consensus 80 ~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~ 159 (376)
T cd05598 80 MDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 159 (376)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccc
Confidence 99999999999998888899999999999999999999999999999999999998776543222
Q ss_pred -----------------------------------------------eeeccccccccccCCCCCCchhhHHHHHHHHHH
Q 040812 197 -----------------------------------------------SCLYESGEARHRKHGGYNGFAADIWSFGVTMME 229 (300)
Q Consensus 197 -----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~e 229 (300)
+..|.+||... +..++.++|||||||++||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlGvilye 236 (376)
T cd05598 160 YQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLL---RTGYTQLCDWWSVGVILYE 236 (376)
T ss_pred cccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHc---CCCCCcceeeeeccceeee
Confidence 22345555443 4456789999999999999
Q ss_pred HHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHhccCCCCCCC---CHHHHhcCCCCCC
Q 040812 230 LYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRW---TASQLLSHPFLAD 299 (300)
Q Consensus 230 lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rp---t~~~~l~hpw~~~ 299 (300)
|+||+.||...........+. .............+++++.++|.+|+ . +|++|+ ++.++++||||++
T Consensus 237 ll~G~~Pf~~~~~~~~~~~i~-~~~~~~~~~~~~~~s~~~~~li~~l~-~-~p~~R~~~~t~~ell~h~~~~~ 306 (376)
T cd05598 237 MLVGQPPFLADTPAETQLKVI-NWETTLHIPSQAKLSREASDLILRLC-C-GAEDRLGKNGADEIKAHPFFKG 306 (376)
T ss_pred hhhCCCCCCCCCHHHHHHHHh-ccCccccCCCCCCCCHHHHHHHHHHh-c-CHhhcCCCCCHHHHhCCCCcCC
Confidence 999999997654322211111 11111111223357889999999976 6 999999 9999999999975
No 44
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=5.6e-45 Score=318.49 Aligned_cols=238 Identities=36% Similarity=0.606 Sum_probs=190.5
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEE
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILM 132 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~ 132 (300)
.++|++.+.||+|+||.||++++..++..+|+|++...... ..+.+|+.++++++||||+++++++.... ..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~ 82 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-EISICM 82 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC-EEEEEe
Confidence 46899999999999999999999999999999998754321 23567999999999999999999988754 899999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhC-CccccCCCCCceeecCCCCCCccc---------------
Q 040812 133 EYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSR-NIVHRDIKPANVLINEKMEHPCGY--------------- 196 (300)
Q Consensus 133 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~-~i~H~Dlkp~Nill~~~~~~~~~~--------------- 196 (300)
||+++++|.+++.....+++..+..++.|++.||.|||++ +|+||||||+|||++.++...+.+
T Consensus 83 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 162 (331)
T cd06649 83 EHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 162 (331)
T ss_pred ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccccccC
Confidence 9999999999998877899999999999999999999986 699999999999998876543322
Q ss_pred --eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHH---------------------------
Q 040812 197 --SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFL--------------------------- 247 (300)
Q Consensus 197 --~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~--------------------------- 247 (300)
+..|.+||... +..++.++|||||||++|||+||+.||...... ...
T Consensus 163 ~g~~~y~aPE~~~---~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (331)
T cd06649 163 VGTRSYMSPERLQ---GTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAK-ELEAIFGRPVVDGEEGEPHSISPRPRPPGR 238 (331)
T ss_pred CCCcCcCCHhHhc---CCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHhcccccccccCCccccCcccccccc
Confidence 23355555543 456788999999999999999999999643221 110
Q ss_pred ----------------HHHHHHhhCCCCCCC-CCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 248 ----------------SLMLAICFREPPSLP-ECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 248 ----------------~~~~~~~~~~~~~~~-~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
.....+.....+..+ ...++++++||.+||+. ||++|||+.++++||||+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~-~P~~Rpt~~ell~h~~~~~ 306 (331)
T cd06649 239 PVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIK-NPAERADLKMLMNHTFIKR 306 (331)
T ss_pred cccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccC-CcccCCCHHHHhcChHHhh
Confidence 011111111122222 24678999999999999 9999999999999999964
No 45
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-47 Score=321.90 Aligned_cols=235 Identities=33% Similarity=0.486 Sum_probs=206.4
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC---CCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEE
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP---PNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILM 132 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~ 132 (300)
-..|...+.||+|+||.||+|.+..+++.||+|++..+.... ...+|+.+|.+.+++||.++|+.|.... .+|++|
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~-~LwiiM 90 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGT-KLWIIM 90 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecc-cHHHHH
Confidence 345777899999999999999999999999999998765443 3467999999999999999999998765 899999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCC-------------------C
Q 040812 133 EYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEH-------------------P 193 (300)
Q Consensus 133 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~-------------------~ 193 (300)
|||.||++.+.++....+.+..+..++++++.||.|||.++.+|||||+.|||+...+.. .
T Consensus 91 ey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~t 170 (467)
T KOG0201|consen 91 EYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKT 170 (467)
T ss_pred HHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhcccc
Confidence 999999999999988778999999999999999999999999999999999999877443 3
Q ss_pred ccceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHH
Q 040812 194 CGYSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFI 273 (300)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 273 (300)
+.++.+|++||... +..|+.++||||||++.+||++|.+|+....+ +..+..+....+|.+...+++.+++||
T Consensus 171 fvGTPfwMAPEVI~---~~~Y~~KADIWSLGITaiEla~GePP~s~~hP----mrvlflIpk~~PP~L~~~~S~~~kEFV 243 (467)
T KOG0201|consen 171 FVGTPFWMAPEVIK---QSGYDTKADIWSLGITAIELAKGEPPHSKLHP----MRVLFLIPKSAPPRLDGDFSPPFKEFV 243 (467)
T ss_pred ccccccccchhhhc---cccccchhhhhhhhHHHHHHhcCCCCCcccCc----ceEEEeccCCCCCccccccCHHHHHHH
Confidence 45677889998876 55688899999999999999999999976555 233444556778888888999999999
Q ss_pred HHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 274 RCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 274 ~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
..||.+ ||+.||+|.++|+|+|++.
T Consensus 244 ~~CL~k-~P~~RpsA~~LLKh~FIk~ 268 (467)
T KOG0201|consen 244 EACLDK-NPEFRPSAKELLKHKFIKR 268 (467)
T ss_pred HHHhhc-CcccCcCHHHHhhhHHHHh
Confidence 999999 9999999999999999875
No 46
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=7.8e-45 Score=301.98 Aligned_cols=240 Identities=26% Similarity=0.450 Sum_probs=191.4
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC----CCCHHHHHHHHhcCCCc-eeEeceeeeCCC-----
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT----PPNPQELNILRQTNSPY-IVKCHQIFTKPS----- 125 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~----- 125 (300)
...|+.+++||+|+||+||+|+.+.+|+.||+|.+..+... ....+|+.+++.++|+| |+++++++...+
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 56788899999999999999999999999999999765442 23478999999999999 999999987765
Q ss_pred CcEEEEEeccCCCCHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-----
Q 040812 126 GEVSILMEYMDAGSLEIYVKSRG----RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY----- 196 (300)
Q Consensus 126 ~~~~lv~e~~~~~~L~~~l~~~~----~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~----- 196 (300)
+.+++||||++. +|..++.... .++...++.+++||+.||+|||+++|+||||||.|||+++.+..++.+
T Consensus 90 ~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAr 168 (323)
T KOG0594|consen 90 GKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLAR 168 (323)
T ss_pred ceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHH
Confidence 279999999976 9999998754 478889999999999999999999999999999999999987654433
Q ss_pred --------------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCC--
Q 040812 197 --------------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPS-- 260 (300)
Q Consensus 197 --------------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~-- 260 (300)
+..|.+||..... ..|+..+||||+|||++||++++..|.+..+......+...........
T Consensus 169 a~~ip~~~yt~evvTlWYRaPEvLlGs--~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp 246 (323)
T KOG0594|consen 169 AFSIPMRTYTPEVVTLWYRAPEVLLGS--TSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWP 246 (323)
T ss_pred HhcCCcccccccEEEeeccCHHHhcCC--CcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCC
Confidence 3335566654422 2578899999999999999999999976655333333332221111000
Q ss_pred -----------CC------------CCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 261 -----------LP------------ECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 261 -----------~~------------~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
++ ....++..+++.+||+. +|.+|.|+..+++||||.+
T Consensus 247 ~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y-~p~~R~Sa~~al~h~yf~~ 307 (323)
T KOG0594|consen 247 GVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQY-DPAKRISAKGALTHPYFSE 307 (323)
T ss_pred CccccccccccCcCCCCccchHHhccccCccHHHHHHHHhcc-CcccCcCHHHHhcChhhcc
Confidence 00 11135789999999999 9999999999999999975
No 47
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=5e-45 Score=318.50 Aligned_cols=232 Identities=26% Similarity=0.443 Sum_probs=188.3
Q ss_pred eeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC-----CCHHHHHHHHhc-CCCceeEeceeeeCCCCcEEEEEeccC
Q 040812 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP-----PNPQELNILRQT-NSPYIVKCHQIFTKPSGEVSILMEYMD 136 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~lv~e~~~ 136 (300)
+.||+|+||.||+|++..+++.||+|+++...... ....|..++.++ +||||+++++++.... ..|+||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~-~~~lv~e~~~ 79 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTES-RLFFVIEFVS 79 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCC-EEEEEEeCCC
Confidence 46999999999999999999999999998643221 234688888888 7999999999998765 8999999999
Q ss_pred CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-------------------e
Q 040812 137 AGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY-------------------S 197 (300)
Q Consensus 137 ~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~-------------------~ 197 (300)
+|+|.+++...+.+++..++.++.||+.||.|||++|++||||||+|||++.++...+.+ +
T Consensus 80 ~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt 159 (329)
T cd05588 80 GGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGT 159 (329)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccCC
Confidence 999999998878899999999999999999999999999999999999998876543322 2
Q ss_pred eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC----CchHHHHHHHHhhCCCCCCCCCCChHHHHHH
Q 040812 198 CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQ----EPDFLSLMLAICFREPPSLPECSSEKFRDFI 273 (300)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 273 (300)
..|.+||... +..++.++|||||||++|+|+||+.||..... ..................+|..++..+.++|
T Consensus 160 ~~y~aPE~~~---~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li 236 (329)
T cd05588 160 PNYIAPEILR---GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLSVKASSVL 236 (329)
T ss_pred ccccCHHHHc---CCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 2345555543 45677899999999999999999999963211 1111222233333445567788899999999
Q ss_pred HHHhccCCCCCCCC------HHHHhcCCCCCC
Q 040812 274 RCCLQKGDPSKRWT------ASQLLSHPFLAD 299 (300)
Q Consensus 274 ~~~l~~~dp~~Rpt------~~~~l~hpw~~~ 299 (300)
.+||.. ||++|++ ++++++||||++
T Consensus 237 ~~~L~~-dP~~R~~~~~~~~~~~i~~hp~~~~ 267 (329)
T cd05588 237 KGFLNK-DPKERLGCHPQTGFRDIKSHPFFRN 267 (329)
T ss_pred HHHhcc-CHHHcCCCCCCCCHHHHhcCCCCCC
Confidence 999999 9999997 789999999975
No 48
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=4.3e-45 Score=318.72 Aligned_cols=227 Identities=27% Similarity=0.443 Sum_probs=187.8
Q ss_pred eeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEeccCC
Q 040812 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDA 137 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~ 137 (300)
+.||+|+||.||++++..+++.||+|++...... ..+.+|+.+++.++||||+++++++.... ..|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~lv~Ey~~~ 79 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKD-RLCFVMEYVNG 79 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCC-EEEEEEeCCCC
Confidence 4699999999999999999999999999754322 12356999999999999999999988754 89999999999
Q ss_pred CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-------------------ee
Q 040812 138 GSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY-------------------SC 198 (300)
Q Consensus 138 ~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~-------------------~~ 198 (300)
|+|..++.....+++..++.++.||+.||.|||++||+||||||+|||++.++...+++ +.
T Consensus 80 g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~ 159 (328)
T cd05593 80 GELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTP 159 (328)
T ss_pred CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCCc
Confidence 99999998877899999999999999999999999999999999999998775543322 23
Q ss_pred eccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHhc
Q 040812 199 LYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQ 278 (300)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 278 (300)
.|.+||... +..++.++|||||||++|+|+||+.||...+.. .....+ ......+|...++++.++|.+||.
T Consensus 160 ~y~aPE~~~---~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~----~~~~~~-~~~~~~~p~~~~~~~~~li~~~L~ 231 (328)
T cd05593 160 EYLAPEVLE---DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE----KLFELI-LMEDIKFPRTLSADAKSLLSGLLI 231 (328)
T ss_pred CccChhhhc---CCCCCccCCccccchHHHHHhhCCCCCCCCCHH----HHHHHh-ccCCccCCCCCCHHHHHHHHHHcC
Confidence 345555443 455678999999999999999999999654322 222222 234456677889999999999999
Q ss_pred cCCCCCCC-----CHHHHhcCCCCCC
Q 040812 279 KGDPSKRW-----TASQLLSHPFLAD 299 (300)
Q Consensus 279 ~~dp~~Rp-----t~~~~l~hpw~~~ 299 (300)
. ||++|+ ++.++++||||.+
T Consensus 232 ~-dP~~R~~~~~~~~~~il~h~~~~~ 256 (328)
T cd05593 232 K-DPNKRLGGGPDDAKEIMRHSFFTG 256 (328)
T ss_pred C-CHHHcCCCCCCCHHHHhcCCCcCC
Confidence 9 999997 8999999999975
No 49
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.6e-45 Score=326.13 Aligned_cols=234 Identities=24% Similarity=0.408 Sum_probs=188.9
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv 131 (300)
++|++.+.||+|+||.||+|++..+++.||||++...... ..+.+|+.+++.++|+||+++++++.... ..|+|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~-~~~lv 79 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDEN-YLYLI 79 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCC-eEEEE
Confidence 4789999999999999999999999999999999753211 12356999999999999999999998765 89999
Q ss_pred EeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcc----------------
Q 040812 132 MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG---------------- 195 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~---------------- 195 (300)
|||+++|+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++...+.
T Consensus 80 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~ 159 (364)
T cd05599 80 MEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEF 159 (364)
T ss_pred ECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceeccccccccc
Confidence 9999999999999888889999999999999999999999999999999999999877654322
Q ss_pred -----------------------------------------ceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCC
Q 040812 196 -----------------------------------------YSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGY 234 (300)
Q Consensus 196 -----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~ 234 (300)
++..|.+||... +..++.++|||||||++|||++|.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~el~~G~ 236 (364)
T cd05599 160 YRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFL---QTGYNKECDWWSLGVIMYEMLVGY 236 (364)
T ss_pred cccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHc---CCCCCCeeeeecchhHHHHhhcCC
Confidence 223355555443 445678999999999999999999
Q ss_pred CCCCCCCCCchHHHHHHHHhhCCCCCCCC--CCChHHHHHHHHHhccCCCCCCCC---HHHHhcCCCCCC
Q 040812 235 YPFLEPGQEPDFLSLMLAICFREPPSLPE--CSSEKFRDFIRCCLQKGDPSKRWT---ASQLLSHPFLAD 299 (300)
Q Consensus 235 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~li~~~l~~~dp~~Rpt---~~~~l~hpw~~~ 299 (300)
.||...........+. ........+. .++++++++|.+|+ . +|.+|++ +.++++||||++
T Consensus 237 ~Pf~~~~~~~~~~~i~---~~~~~~~~~~~~~~s~~~~~li~~ll-~-~p~~R~~~~~~~~ll~h~~~~~ 301 (364)
T cd05599 237 PPFCSDNPQETYRKII---NWKETLQFPDEVPLSPEAKDLIKRLC-C-EAERRLGNNGVNEIKSHPFFKG 301 (364)
T ss_pred CCCCCCCHHHHHHHHH---cCCCccCCCCCCCCCHHHHHHHHHHc-c-CHhhcCCCCCHHHHhcCCCcCC
Confidence 9997544322211111 1111222232 46889999999998 5 8999998 999999999975
No 50
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.3e-44 Score=329.97 Aligned_cols=239 Identities=24% Similarity=0.371 Sum_probs=183.2
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCC-CCCCHHHHHHHHhcCC------CceeEeceeeeCCCCc
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG-TPPNPQELNILRQTNS------PYIVKCHQIFTKPSGE 127 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l~h------~niv~~~~~~~~~~~~ 127 (300)
..++|++.+.||+|+||.||+|.+..+++.||||+++.... ......|+.+++.++| .+++.+++++..+.+.
T Consensus 127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~ 206 (467)
T PTZ00284 127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGH 206 (467)
T ss_pred CCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCce
Confidence 34789999999999999999999999999999999864321 2223558888877755 4588899988876668
Q ss_pred EEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCceeecCCCC---------------
Q 040812 128 VSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHS-RNIVHRDIKPANVLINEKME--------------- 191 (300)
Q Consensus 128 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~-~~i~H~Dlkp~Nill~~~~~--------------- 191 (300)
.|+|||++ +++|.+++...+.+++..++.++.||+.||.|||+ .||+||||||+|||++.++.
T Consensus 207 ~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~ 285 (467)
T PTZ00284 207 MCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPC 285 (467)
T ss_pred EEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCc
Confidence 99999999 66899998887889999999999999999999997 59999999999999986542
Q ss_pred -C---Ccc-------------ceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHh
Q 040812 192 -H---PCG-------------YSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAIC 254 (300)
Q Consensus 192 -~---~~~-------------~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~ 254 (300)
. ++| ++..|.+||... +..++.++|||||||++|||+||+.||...+.. +....+....
T Consensus 286 ~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~---~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~-~~~~~i~~~~ 361 (467)
T PTZ00284 286 RVRICDLGGCCDERHSRTAIVSTRHYRSPEVVL---GLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNL-EHLHLMEKTL 361 (467)
T ss_pred eEEECCCCccccCccccccccCCccccCcHHhh---cCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHc
Confidence 1 122 234567777654 556788999999999999999999999654432 1111111110
Q ss_pred hCCC-----------------------CC--------------C-CCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCC
Q 040812 255 FREP-----------------------PS--------------L-PECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPF 296 (300)
Q Consensus 255 ~~~~-----------------------~~--------------~-~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw 296 (300)
...+ +. . ....++.+.|||.+||+. ||++|||++|+|+|||
T Consensus 362 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~-dP~~R~ta~e~L~Hp~ 440 (467)
T PTZ00284 362 GRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHY-DRQKRLNARQMTTHPY 440 (467)
T ss_pred CCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCc-ChhhCCCHHHHhcCcc
Confidence 0000 00 0 001245678999999999 9999999999999999
Q ss_pred CCC
Q 040812 297 LAD 299 (300)
Q Consensus 297 ~~~ 299 (300)
|.+
T Consensus 441 ~~~ 443 (467)
T PTZ00284 441 VLK 443 (467)
T ss_pred ccc
Confidence 975
No 51
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-45 Score=306.65 Aligned_cols=246 Identities=27% Similarity=0.370 Sum_probs=190.6
Q ss_pred CCccCCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCC----CCCCHHHHHHHHhcCCCceeEeceeeeCC-
Q 040812 50 GQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG----TPPNPQELNILRQTNSPYIVKCHQIFTKP- 124 (300)
Q Consensus 50 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~- 124 (300)
+...+.-..|..++.||+|+||.|+.+.++.+|+.||||.+...-. .....+|+++|+.++|+||+.+.+++..+
T Consensus 15 ~~~~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~ 94 (359)
T KOG0660|consen 15 GELFEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPS 94 (359)
T ss_pred eeEEeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccc
Confidence 3344445567778999999999999999999999999998763222 22346899999999999999999998752
Q ss_pred ---CCcEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-----
Q 040812 125 ---SGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY----- 196 (300)
Q Consensus 125 ---~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~----- 196 (300)
-..+|+|+|+|+. +|.+.++....++...+..++.||+.||+|+|+.+|+||||||+|+|++.+...++.+
T Consensus 95 ~~~f~DvYiV~elMet-DL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR 173 (359)
T KOG0660|consen 95 RDKFNDVYLVFELMET-DLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLAR 173 (359)
T ss_pred ccccceeEEehhHHhh-HHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEecccccee
Confidence 1359999999965 9999999887799999999999999999999999999999999999999875543322
Q ss_pred ----------------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHh------
Q 040812 197 ----------------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAIC------ 254 (300)
Q Consensus 197 ----------------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~------ 254 (300)
+..|.+||... ....|+.++||||+|||+.||++|++-|.+.+....+..++....
T Consensus 174 ~~~~~~~~~~mTeYVaTRWYRAPElll--~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~ 251 (359)
T KOG0660|consen 174 YLDKFFEDGFMTEYVATRWYRAPELLL--NSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEED 251 (359)
T ss_pred eccccCcccchhcceeeeeecCHHHHh--ccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHH
Confidence 22344554442 245678899999999999999999999965543322211111110
Q ss_pred -------------hCC--CCC-----CCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 255 -------------FRE--PPS-----LPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 255 -------------~~~--~~~-----~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
... .+. .-...++...+|+.+||.. ||.+|+|++|+|.||||+.
T Consensus 252 l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~f-dP~kRita~eAL~hPYl~~ 315 (359)
T KOG0660|consen 252 LQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVF-DPKKRITAEEALAHPYLAP 315 (359)
T ss_pred HHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhcc-CccccCCHHHHhcChhhhh
Confidence 001 111 1125688999999999999 9999999999999999963
No 52
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.8e-45 Score=327.75 Aligned_cols=234 Identities=24% Similarity=0.351 Sum_probs=188.5
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCC-----CCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG-----TPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv 131 (300)
++|++++.||+|+||.||+|++..+++.||+|++..... .....+|+.++++++|+||+++++.+.+.. ..|+|
T Consensus 1 ~~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~-~~~lv 79 (382)
T cd05625 1 SMFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKD-NLYFV 79 (382)
T ss_pred CCcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCC-EEEEE
Confidence 368999999999999999999999999999999875322 123457999999999999999999998764 89999
Q ss_pred EeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc---------------
Q 040812 132 MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY--------------- 196 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~--------------- 196 (300)
||||++|+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++...+.+
T Consensus 80 ~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~ 159 (382)
T cd05625 80 MDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 159 (382)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccccc
Confidence 99999999999998877899999999999999999999999999999999999998765543322
Q ss_pred ---------------------------------------------------eeeccccccccccCCCCCCchhhHHHHHH
Q 040812 197 ---------------------------------------------------SCLYESGEARHRKHGGYNGFAADIWSFGV 225 (300)
Q Consensus 197 ---------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~ 225 (300)
+..|.+||... +..++.++|||||||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~~DiwSlGv 236 (382)
T cd05625 160 YQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLL---RTGYTQLCDWWSVGV 236 (382)
T ss_pred cccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhc---CCCCCCeeeEEechH
Confidence 22355555443 445678999999999
Q ss_pred HHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCC--CCCCChHHHHHHHHHhccCCCCCCCC---HHHHhcCCCCCC
Q 040812 226 TMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL--PECSSEKFRDFIRCCLQKGDPSKRWT---ASQLLSHPFLAD 299 (300)
Q Consensus 226 il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~dp~~Rpt---~~~~l~hpw~~~ 299 (300)
++|||+||+.||...........+. ........ ....++++.++|.+|+ . ||++|++ ++++++||||++
T Consensus 237 il~elltG~~Pf~~~~~~~~~~~i~---~~~~~~~~p~~~~~s~~~~~li~~l~-~-~p~~R~~~~~~~ei~~hp~f~~ 310 (382)
T cd05625 237 ILYEMLVGQPPFLAQTPLETQMKVI---NWQTSLHIPPQAKLSPEASDLIIKLC-R-GPEDRLGKNGADEIKAHPFFKT 310 (382)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHH---ccCCCcCCCCcccCCHHHHHHHHHHc-c-CHhHcCCCCCHHHHhcCCCcCC
Confidence 9999999999997644322221111 11122222 2457899999999976 6 9999997 999999999975
No 53
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=6.3e-45 Score=317.31 Aligned_cols=232 Identities=26% Similarity=0.422 Sum_probs=190.2
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhcCCC-ceeEeceeeeCCCCcEEEE
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTNSP-YIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~h~-niv~~~~~~~~~~~~~~lv 131 (300)
+|++++.||+|+||.||+|++..+++.||+|++...... .....|..++..++|+ +|+.+++++.... ..|+|
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~-~~~lv 79 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD-RLYFV 79 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCC-EEEEE
Confidence 588999999999999999999999999999998754221 1235688888888775 5888888887654 89999
Q ss_pred EeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc---------------
Q 040812 132 MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY--------------- 196 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~--------------- 196 (300)
|||+++|+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++...+.+
T Consensus 80 ~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~ 159 (324)
T cd05587 80 MEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTR 159 (324)
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCcee
Confidence 99999999999998888899999999999999999999999999999999999998876543322
Q ss_pred ----eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHH
Q 040812 197 ----SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDF 272 (300)
Q Consensus 197 ----~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 272 (300)
+..|.+||... +..++.++|||||||++|||+||+.||...... .....+ ......++...++++.++
T Consensus 160 ~~~gt~~y~aPE~~~---~~~~~~~~DiwslGvil~elltG~~pf~~~~~~----~~~~~i-~~~~~~~~~~~~~~~~~l 231 (324)
T cd05587 160 TFCGTPDYIAPEIIA---YQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED----ELFQSI-MEHNVSYPKSLSKEAVSI 231 (324)
T ss_pred eecCCccccChhhhc---CCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH----HHHHHH-HcCCCCCCCCCCHHHHHH
Confidence 23355555543 455778999999999999999999999654332 222222 234456677889999999
Q ss_pred HHHHhccCCCCCCCCH-----HHHhcCCCCCC
Q 040812 273 IRCCLQKGDPSKRWTA-----SQLLSHPFLAD 299 (300)
Q Consensus 273 i~~~l~~~dp~~Rpt~-----~~~l~hpw~~~ 299 (300)
+.+||.. ||++|++. +++++||||+.
T Consensus 232 i~~~l~~-~P~~R~~~~~~~~~~~~~hp~~~~ 262 (324)
T cd05587 232 CKGLLTK-HPAKRLGCGPTGERDIREHAFFRR 262 (324)
T ss_pred HHHHhhc-CHHHcCCCCCCCHHHHhcCCCcCC
Confidence 9999999 99999986 89999999975
No 54
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=3.3e-45 Score=325.47 Aligned_cols=234 Identities=25% Similarity=0.399 Sum_probs=186.8
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCC-----CCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG-----TPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv 131 (300)
++|++++.||+|+||.||++.+..+++.||+|++..... ...+.+|+.++++++||||+++++++.+.. ..|+|
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~-~~~lv 79 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQ-YLYLI 79 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eeEEE
Confidence 468999999999999999999999999999999865321 122356999999999999999999998765 89999
Q ss_pred EeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcc----------------
Q 040812 132 MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG---------------- 195 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~---------------- 195 (300)
|||+++|+|.+++...+.+++..++.++.|++.||.|||+.||+||||||+|||++.++...+.
T Consensus 80 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 159 (377)
T cd05629 80 MEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAY 159 (377)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccccccccccccc
Confidence 9999999999999888889999999999999999999999999999999999999876543222
Q ss_pred --------------------------------------------------ceeeccccccccccCCCCCCchhhHHHHHH
Q 040812 196 --------------------------------------------------YSCLYESGEARHRKHGGYNGFAADIWSFGV 225 (300)
Q Consensus 196 --------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~ 225 (300)
++..|.+||... +..++.++|||||||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlGv 236 (377)
T cd05629 160 YQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFL---QQGYGQECDWWSLGA 236 (377)
T ss_pred ccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHc---cCCCCCceeeEecch
Confidence 222355555543 445778999999999
Q ss_pred HHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCC--CCChHHHHHHHHHhccCCCCC---CCCHHHHhcCCCCCC
Q 040812 226 TMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPE--CSSEKFRDFIRCCLQKGDPSK---RWTASQLLSHPFLAD 299 (300)
Q Consensus 226 il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~li~~~l~~~dp~~---Rpt~~~~l~hpw~~~ 299 (300)
++|||+||..||........+..+. .......+|. .++.++++||.+||. +|.+ |+++.++++||||++
T Consensus 237 il~elltG~~Pf~~~~~~~~~~~i~---~~~~~~~~p~~~~~s~~~~dli~~lL~--~~~~r~~r~~~~~~l~hp~~~~ 310 (377)
T cd05629 237 IMFECLIGWPPFCSENSHETYRKII---NWRETLYFPDDIHLSVEAEDLIRRLIT--NAENRLGRGGAHEIKSHPFFRG 310 (377)
T ss_pred hhhhhhcCCCCCCCCCHHHHHHHHH---ccCCccCCCCCCCCCHHHHHHHHHHhc--CHhhcCCCCCHHHHhcCCCcCC
Confidence 9999999999996544322111111 1122233333 468899999999995 4555 569999999999975
No 55
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=9.5e-45 Score=317.88 Aligned_cols=238 Identities=24% Similarity=0.325 Sum_probs=183.5
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC----CCCHHHHHHHHhcCCCceeEeceeeeCCC----CcEE
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT----PPNPQELNILRQTNSPYIVKCHQIFTKPS----GEVS 129 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~~ 129 (300)
+|++.+.||+|+||.||+|.++.+++.||+|.+...... ..+.+|+.++++++||||+++++++.... ...|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 589999999999999999999999999999998643211 23467999999999999999999875432 2489
Q ss_pred EEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce------------
Q 040812 130 ILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS------------ 197 (300)
Q Consensus 130 lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~------------ 197 (300)
+|||||. ++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||++.++...++++
T Consensus 81 lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~ 159 (338)
T cd07859 81 VVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 159 (338)
T ss_pred EEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccCc
Confidence 9999996 589999988778999999999999999999999999999999999999998765433222
Q ss_pred ----------eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHH---------------
Q 040812 198 ----------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLA--------------- 252 (300)
Q Consensus 198 ----------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~--------------- 252 (300)
..|.+||.... ....++.++|||||||++|||+||+.||........ ...+..
T Consensus 160 ~~~~~~~~~t~~y~aPE~~~~-~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~ 237 (338)
T cd07859 160 AIFWTDYVATRWYRAPELCGS-FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQ-LDLITDLLGTPSPETISRVRN 237 (338)
T ss_pred cccccCCCCCCCcCCHHHHhc-cccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHH-HHHHHHHhCCCCHHHHHHhhh
Confidence 22445554321 114567799999999999999999999965432111 011000
Q ss_pred ---------HhhCCCCCC---CCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 253 ---------ICFREPPSL---PECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 253 ---------~~~~~~~~~---~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
.....+... ....++.+.++|.+||.. ||++|||++|+++||||++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~-~P~~Rpt~~e~l~hp~f~~ 295 (338)
T cd07859 238 EKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAF-DPKDRPTAEEALADPYFKG 295 (338)
T ss_pred hhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCc-CcccCCCHHHHhcCchhhh
Confidence 000011111 123567889999999999 9999999999999999975
No 56
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=4.8e-45 Score=317.43 Aligned_cols=227 Identities=26% Similarity=0.450 Sum_probs=186.1
Q ss_pred eeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhc-CCCceeEeceeeeCCCCcEEEEEeccC
Q 040812 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQT-NSPYIVKCHQIFTKPSGEVSILMEYMD 136 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~lv~e~~~ 136 (300)
+.||+|+||.||+|+++.+++.||+|+++..... .....|..++..+ +||||+++++++.... ..|+||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~-~~~iv~Ey~~ 79 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPD-RLFFVMEFVN 79 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCC-EEEEEEcCCC
Confidence 4699999999999999999999999998754221 1234577788766 6999999999988764 8999999999
Q ss_pred CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-------------------e
Q 040812 137 AGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY-------------------S 197 (300)
Q Consensus 137 ~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~-------------------~ 197 (300)
+|+|.+++.....+++..+..++.|++.||.|||++|++||||||+|||++.++...+.+ +
T Consensus 80 ~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt 159 (320)
T cd05590 80 GGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGT 159 (320)
T ss_pred CchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccccC
Confidence 999999998888899999999999999999999999999999999999999876543322 2
Q ss_pred eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHh
Q 040812 198 CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCL 277 (300)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 277 (300)
..|.+||... +..++.++|||||||++|||+||+.||...+.. .....+ .......+...++++.++|.+||
T Consensus 160 ~~y~aPE~~~---~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~----~~~~~i-~~~~~~~~~~~~~~~~~li~~~L 231 (320)
T cd05590 160 PDYIAPEILQ---EMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED----DLFEAI-LNDEVVYPTWLSQDAVDILKAFM 231 (320)
T ss_pred ccccCHHHHc---CCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH----HHHHHH-hcCCCCCCCCCCHHHHHHHHHHc
Confidence 3345555443 455678999999999999999999999654332 222222 23445567778999999999999
Q ss_pred ccCCCCCCCCH------HHHhcCCCCCC
Q 040812 278 QKGDPSKRWTA------SQLLSHPFLAD 299 (300)
Q Consensus 278 ~~~dp~~Rpt~------~~~l~hpw~~~ 299 (300)
+. ||++|+++ +++++||||++
T Consensus 232 ~~-dP~~R~~~~~~~~~~~~~~h~~f~~ 258 (320)
T cd05590 232 TK-NPTMRLGSLTLGGEEAILRHPFFKE 258 (320)
T ss_pred cc-CHHHCCCCCCCCCHHHHHcCCCcCC
Confidence 99 99999998 99999999976
No 57
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=8.5e-45 Score=315.31 Aligned_cols=227 Identities=24% Similarity=0.428 Sum_probs=185.1
Q ss_pred eeecCCcceEEEEEEEccCCeEEEEEEeecCCC-----CCCCHHHHHHHHh-cCCCceeEeceeeeCCCCcEEEEEeccC
Q 040812 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG-----TPPNPQELNILRQ-TNSPYIVKCHQIFTKPSGEVSILMEYMD 136 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~lv~e~~~ 136 (300)
+.||+|+||.||+|+++.+++.||+|+++.... ......|..++.. .+||||+++++++.... ..|+||||+.
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~-~~~lv~E~~~ 79 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKE-HLFFVMEFLN 79 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCC-EEEEEECCCC
Confidence 469999999999999999999999999975421 1223457777765 48999999999998754 8999999999
Q ss_pred CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-------------------e
Q 040812 137 AGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY-------------------S 197 (300)
Q Consensus 137 ~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~-------------------~ 197 (300)
+|+|..++.....+++..+..++.||+.||.|||++||+||||||+|||++.++...+.+ +
T Consensus 80 ~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt 159 (316)
T cd05620 80 GGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGT 159 (316)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCCC
Confidence 999999998888899999999999999999999999999999999999999876543222 2
Q ss_pred eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHh
Q 040812 198 CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCL 277 (300)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 277 (300)
..|.+||... +..++.++|||||||++|||++|..||...+.. ..... .....+..+...+.+++++|.+||
T Consensus 160 ~~y~aPE~~~---~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~li~~~l 231 (316)
T cd05620 160 PDYIAPEILQ---GLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED----ELFES-IRVDTPHYPRWITKESKDILEKLF 231 (316)
T ss_pred cCccCHHHHc---CCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH----HHHHH-HHhCCCCCCCCCCHHHHHHHHHHc
Confidence 3355555543 456778999999999999999999999654322 22222 223445667778999999999999
Q ss_pred ccCCCCCCCCH-HHHhcCCCCCC
Q 040812 278 QKGDPSKRWTA-SQLLSHPFLAD 299 (300)
Q Consensus 278 ~~~dp~~Rpt~-~~~l~hpw~~~ 299 (300)
.. ||++|+++ +++++||||++
T Consensus 232 ~~-dP~~R~~~~~~~~~h~~f~~ 253 (316)
T cd05620 232 ER-DPTRRLGVVGNIRGHPFFKT 253 (316)
T ss_pred cC-CHHHcCCChHHHHcCCCcCC
Confidence 99 99999997 58999999976
No 58
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.5e-44 Score=315.97 Aligned_cols=237 Identities=30% Similarity=0.467 Sum_probs=190.8
Q ss_pred cceeeeeecCCcceEEEEEEEc---cCCeEEEEEEeecCCCC------CCCHHHHHHHHhc-CCCceeEeceeeeCCCCc
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHK---QTLALYALKVMQCDRGT------PPNPQELNILRQT-NSPYIVKCHQIFTKPSGE 127 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~------~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 127 (300)
+|++.+.||+|+||.||++++. .+++.||+|++...... ....+|+.+++++ +|+||+++++++.... .
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~-~ 79 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEA-K 79 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCC-E
Confidence 4899999999999999999874 46889999998753211 1235689999999 5899999999988754 8
Q ss_pred EEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-----------
Q 040812 128 VSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY----------- 196 (300)
Q Consensus 128 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~----------- 196 (300)
.|+||||+++|+|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.++...+.+
T Consensus 80 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~ 159 (332)
T cd05614 80 LHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEE 159 (332)
T ss_pred EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccC
Confidence 999999999999999998888899999999999999999999999999999999999998875543222
Q ss_pred ---------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCCh
Q 040812 197 ---------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSE 267 (300)
Q Consensus 197 ---------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (300)
+..|.+||.... ...++.++|||||||++|||+||..||............... .....+.++...++
T Consensus 160 ~~~~~~~~gt~~y~aPE~~~~--~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 236 (332)
T cd05614 160 KERTYSFCGTIEYMAPEIIRG--KGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRR-ILKCDPPFPSFIGP 236 (332)
T ss_pred CCccccccCCccccCHHHhcC--CCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHH-HhcCCCCCCCCCCH
Confidence 233555555431 123567899999999999999999999654333222222222 23445566778899
Q ss_pred HHHHHHHHHhccCCCCCCC-----CHHHHhcCCCCCC
Q 040812 268 KFRDFIRCCLQKGDPSKRW-----TASQLLSHPFLAD 299 (300)
Q Consensus 268 ~l~~li~~~l~~~dp~~Rp-----t~~~~l~hpw~~~ 299 (300)
.+.++|.+||.. ||++|| +++++++||||++
T Consensus 237 ~~~~li~~~l~~-dp~~R~~~~~~~~~~~l~h~~~~~ 272 (332)
T cd05614 237 EAQDLLHKLLRK-DPKKRLGAGPQGASEIKEHPFFKG 272 (332)
T ss_pred HHHHHHHHHcCC-CHHHcCCCCCCCHHHHHcCCCcCC
Confidence 999999999999 999999 8899999999975
No 59
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=2.6e-45 Score=323.07 Aligned_cols=234 Identities=29% Similarity=0.450 Sum_probs=189.4
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv 131 (300)
++|++.+.||+|+||.||+|++..+++.||+|+++..... ..+.+|+.++..++|+||+++++++.+.. ..|+|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-~~~lv 79 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEE-HLYLV 79 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCC-eEEEE
Confidence 4799999999999999999999999999999999754322 23457999999999999999999988754 89999
Q ss_pred EeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc---------------
Q 040812 132 MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY--------------- 196 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~--------------- 196 (300)
|||+++++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++...+.+
T Consensus 80 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~ 159 (350)
T cd05573 80 MEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREY 159 (350)
T ss_pred EcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcccc
Confidence 99999999999998888899999999999999999999999999999999999998876543222
Q ss_pred ---------------------------------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCC
Q 040812 197 ---------------------------------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQE 243 (300)
Q Consensus 197 ---------------------------------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~ 243 (300)
+..|.+||... +..++.++|||||||++|||++|+.||......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~ 236 (350)
T cd05573 160 YLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLR---GTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQ 236 (350)
T ss_pred cccccccccccccccccccccccccccccccccCccccCHHHHc---CCCCCCceeeEecchhhhhhccCCCCCCCCCHH
Confidence 22344444433 446778999999999999999999999765432
Q ss_pred chHHHHHHHHhhCCCCCCCC--CCChHHHHHHHHHhccCCCCCCCC-HHHHhcCCCCCC
Q 040812 244 PDFLSLMLAICFREPPSLPE--CSSEKFRDFIRCCLQKGDPSKRWT-ASQLLSHPFLAD 299 (300)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~--~~~~~l~~li~~~l~~~dp~~Rpt-~~~~l~hpw~~~ 299 (300)
.....+.. .......|. .+++++.++|.+|| . ||.+|++ ++++++||||++
T Consensus 237 ~~~~~i~~---~~~~~~~p~~~~~~~~~~~li~~ll-~-dp~~R~~s~~~ll~hp~~~~ 290 (350)
T cd05573 237 ETYNKIIN---WKESLRFPPDPPVSPEAIDLICRLL-C-DPEDRLGSFEEIKSHPFFKG 290 (350)
T ss_pred HHHHHHhc---cCCcccCCCCCCCCHHHHHHHHHHc-c-ChhhcCCCHHHHhcCCCcCC
Confidence 22222211 011222222 35899999999999 5 8999999 999999999976
No 60
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.4e-44 Score=319.38 Aligned_cols=234 Identities=24% Similarity=0.310 Sum_probs=183.6
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEecc
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYM 135 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~ 135 (300)
..+|++++.||+|+||.||+|.+..+++.||+|.... ....+|+.++++++||||+++++++.... ..|+|||++
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~----~~~~~E~~il~~l~HpnIv~~~~~~~~~~-~~~lv~e~~ 165 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR----GGTATEAHILRAINHPSIIQLKGTFTYNK-FTCLILPRY 165 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh----hhhHHHHHHHHhCCCCCCCCEeEEEEECC-eeEEEEecC
Confidence 4679999999999999999999999999999997542 23578999999999999999999988754 899999999
Q ss_pred CCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-------------------
Q 040812 136 DAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY------------------- 196 (300)
Q Consensus 136 ~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~------------------- 196 (300)
. ++|..++.....+++..++.++.||+.||.|||++||+||||||+|||++.++...+.+
T Consensus 166 ~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 244 (391)
T PHA03212 166 K-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWA 244 (391)
T ss_pred C-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCccccccccccccccccc
Confidence 6 58999988877899999999999999999999999999999999999998765543322
Q ss_pred -eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCC------chHHHHHHHH----------------
Q 040812 197 -SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQE------PDFLSLMLAI---------------- 253 (300)
Q Consensus 197 -~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~------~~~~~~~~~~---------------- 253 (300)
+..|.+||... +..++.++|||||||++|||+||..||...... ......+...
T Consensus 245 gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~ 321 (391)
T PHA03212 245 GTIATNAPELLA---RDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANL 321 (391)
T ss_pred CccCCCChhhhc---CCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHH
Confidence 22344555433 456788999999999999999999887643211 0111111000
Q ss_pred -------hhC---CCCCCC-----CCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 254 -------CFR---EPPSLP-----ECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 254 -------~~~---~~~~~~-----~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
... .+...+ ...+.++.++|.+||.. ||++|||++|+++||||.+
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~-dP~~Rpta~elL~hp~f~~ 381 (391)
T PHA03212 322 DEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAF-DAHHRPSAEALLDFAAFQD 381 (391)
T ss_pred HHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcC-ChhhCCCHHHHhcChhhcc
Confidence 000 000000 12356799999999999 9999999999999999976
No 61
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.6e-44 Score=315.24 Aligned_cols=232 Identities=28% Similarity=0.465 Sum_probs=187.2
Q ss_pred eeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC-----CCHHHHHHHHhc-CCCceeEeceeeeCCCCcEEEEEeccC
Q 040812 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP-----PNPQELNILRQT-NSPYIVKCHQIFTKPSGEVSILMEYMD 136 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~lv~e~~~ 136 (300)
+.||+|+||.||+|++..+++.||+|+++...... ...+|+.++.++ +||||+++++++.... ..|+||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~-~~~lv~E~~~ 79 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES-RLFFVIEYVN 79 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCC-EEEEEEeCCC
Confidence 46999999999999999999999999997643221 124577777766 8999999999988765 8999999999
Q ss_pred CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-------------------e
Q 040812 137 AGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY-------------------S 197 (300)
Q Consensus 137 ~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~-------------------~ 197 (300)
+|+|..++.....+++..++.++.||+.||.|||++||+||||||+||+++.++...+.+ +
T Consensus 80 ~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt 159 (329)
T cd05618 80 GGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGT 159 (329)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccCC
Confidence 999999998888899999999999999999999999999999999999999876543322 2
Q ss_pred eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC----CchHHHHHHHHhhCCCCCCCCCCChHHHHHH
Q 040812 198 CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQ----EPDFLSLMLAICFREPPSLPECSSEKFRDFI 273 (300)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 273 (300)
..|.+||... +..++.++|||||||++|||+||+.||..... ..................+|...+..+.++|
T Consensus 160 ~~y~aPE~~~---~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll 236 (329)
T cd05618 160 PNYIAPEILR---GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVL 236 (329)
T ss_pred ccccCHHHHc---CCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCCCCCHHHHHHH
Confidence 2345555443 55677899999999999999999999953211 1111222223333455567888899999999
Q ss_pred HHHhccCCCCCCCC------HHHHhcCCCCCC
Q 040812 274 RCCLQKGDPSKRWT------ASQLLSHPFLAD 299 (300)
Q Consensus 274 ~~~l~~~dp~~Rpt------~~~~l~hpw~~~ 299 (300)
.+||.. ||++|++ ++++++||||++
T Consensus 237 ~~~L~~-dP~~R~~~~~~~~~~~i~~hp~f~~ 267 (329)
T cd05618 237 KSFLNK-DPKERLGCHPQTGFADIQGHPFFRN 267 (329)
T ss_pred HHHhcC-CHHHcCCCCCCCCHHHHhcCCCCCC
Confidence 999999 9999998 589999999976
No 62
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=2.4e-44 Score=308.16 Aligned_cols=236 Identities=24% Similarity=0.350 Sum_probs=191.8
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEE
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILM 132 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~ 132 (300)
+|++.+.||+|+||.||++.+..+++.||+|.+...... ..+.+|+.++++++|+||+++++++.... ..|+||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~ 79 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD-ALCLVL 79 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCC-eEEEEE
Confidence 488999999999999999999999999999998654322 22357999999999999999999987765 899999
Q ss_pred eccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc--------------
Q 040812 133 EYMDAGSLEIYVKSR--GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY-------------- 196 (300)
Q Consensus 133 e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~-------------- 196 (300)
||+++|+|.+++... ..+++..+..++.|++.||.|||+.|++||||||+||++++++...+.+
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 159 (285)
T cd05605 80 TLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIR 159 (285)
T ss_pred eccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCccc
Confidence 999999999888643 3589999999999999999999999999999999999998765432221
Q ss_pred ----eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHH
Q 040812 197 ----SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDF 272 (300)
Q Consensus 197 ----~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 272 (300)
+..|.+||... +..++.++|||||||++|||++|+.||........... +...........+...++.+.++
T Consensus 160 ~~~~~~~y~aPE~~~---~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l 235 (285)
T cd05605 160 GRVGTVGYMAPEVVK---NERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREE-VERRVKEDQEEYSEKFSEAARSI 235 (285)
T ss_pred cccCCCCccCcHHhc---CCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHH-HHHHhhhcccccCcccCHHHHHH
Confidence 22355565543 45567899999999999999999999976443322222 22222334455666789999999
Q ss_pred HHHHhccCCCCCCC-----CHHHHhcCCCCCC
Q 040812 273 IRCCLQKGDPSKRW-----TASQLLSHPFLAD 299 (300)
Q Consensus 273 i~~~l~~~dp~~Rp-----t~~~~l~hpw~~~ 299 (300)
|.+||.. ||++|| +++++++||||.+
T Consensus 236 i~~~l~~-~P~~R~~~~~~~~~~l~~~~~~~~ 266 (285)
T cd05605 236 CRQLLTK-DPGFRLGCRGEGAEEVKAHPFFRT 266 (285)
T ss_pred HHHHccC-CHHHhcCCCCCCHHHHhcCcCccC
Confidence 9999999 999999 8999999999975
No 63
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.5e-44 Score=314.86 Aligned_cols=231 Identities=26% Similarity=0.384 Sum_probs=185.8
Q ss_pred ceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHH---HHhcCCCceeEeceeeeCCCCcEEE
Q 040812 59 LEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNI---LRQTNSPYIVKCHQIFTKPSGEVSI 130 (300)
Q Consensus 59 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~---l~~l~h~niv~~~~~~~~~~~~~~l 130 (300)
|++.+.||+|+||.||+|.+..+++.||+|+++..... ....+|+.+ +++++||||+++++++.... ..|+
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~-~~~l 79 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTED-HVCF 79 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCC-EEEE
Confidence 67899999999999999999999999999999754211 112345444 45678999999999988754 8999
Q ss_pred EEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc--------------
Q 040812 131 LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY-------------- 196 (300)
Q Consensus 131 v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~-------------- 196 (300)
||||+++++|..++.. ..+++..+..++.||+.||.|||++|++||||||+||+++.++...+++
T Consensus 80 v~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~ 158 (324)
T cd05589 80 VMEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRT 158 (324)
T ss_pred EEcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCcc
Confidence 9999999999988864 4799999999999999999999999999999999999999876543332
Q ss_pred -----eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHH
Q 040812 197 -----SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRD 271 (300)
Q Consensus 197 -----~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (300)
+..|.+||... +..++.++|||||||++|||++|+.||...... .....+. ......|..+++.+.+
T Consensus 159 ~~~~g~~~y~aPE~~~---~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~----~~~~~i~-~~~~~~p~~~~~~~~~ 230 (324)
T cd05589 159 STFCGTPEFLAPEVLT---ETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE----EVFDSIV-NDEVRYPRFLSREAIS 230 (324)
T ss_pred cccccCccccCHhHhc---CCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH----HHHHHHH-hCCCCCCCCCCHHHHH
Confidence 22345555433 456778999999999999999999999654332 2222222 2344567778999999
Q ss_pred HHHHHhccCCCCCCC-----CHHHHhcCCCCCCC
Q 040812 272 FIRCCLQKGDPSKRW-----TASQLLSHPFLADA 300 (300)
Q Consensus 272 li~~~l~~~dp~~Rp-----t~~~~l~hpw~~~~ 300 (300)
+|.+||.. ||++|| ++.++++||||+++
T Consensus 231 li~~~L~~-dP~~R~~~~~~~~~~l~~~~~f~~~ 263 (324)
T cd05589 231 IMRRLLRR-NPERRLGSGEKDAEDVKKQPFFRDI 263 (324)
T ss_pred HHHHHhhc-CHhHcCCCCCCCHHHHhhCCCcCCC
Confidence 99999999 999999 69999999999863
No 64
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=5.8e-45 Score=322.81 Aligned_cols=235 Identities=29% Similarity=0.463 Sum_probs=186.2
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-CCCHHHHHHHHhcC-C-----CceeEeceeeeCCCCcEEE
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-PPNPQELNILRQTN-S-----PYIVKCHQIFTKPSGEVSI 130 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~E~~~l~~l~-h-----~niv~~~~~~~~~~~~~~l 130 (300)
+|++.+.||+|+||.|-+|.+.+|++.||||++++.... .....|+.+|..++ | -|+|+++++|...+ ++||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~-Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRN-HLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccc-ceee
Confidence 689999999999999999999999999999999875533 23356999999997 4 38999999998754 9999
Q ss_pred EEeccCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCC-----Cccc-------
Q 040812 131 LMEYMDAGSLEIYVKSRG--RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEH-----PCGY------- 196 (300)
Q Consensus 131 v~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~-----~~~~------- 196 (300)
|+|.++. +|.++++.+. .|+...++.++.||+.||.+||+.||||+||||+||||...... ++|.
T Consensus 266 VfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~ 344 (586)
T KOG0667|consen 266 VFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQR 344 (586)
T ss_pred eehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCCc
Confidence 9999966 9999999764 58999999999999999999999999999999999999865443 2332
Q ss_pred ------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCC-------------
Q 040812 197 ------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFRE------------- 257 (300)
Q Consensus 197 ------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~------------- 257 (300)
+..|.+||... |..|+.+.||||||||++||+||.+.|.+.+.. +.+..+..+....
T Consensus 345 vytYiQSRfYRAPEVIL---GlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~-DQl~~I~e~lG~Pp~~mL~~~~~~~k 420 (586)
T KOG0667|consen 345 VYTYIQSRFYRAPEVIL---GLPYDTAIDMWSLGCILAELFTGEPLFPGDNEY-DQLARIIEVLGLPPPKMLDTAKKAHK 420 (586)
T ss_pred ceeeeeccccccchhhc---cCCCCCccceeehhhhHHhHhcCccccCCCCHH-HHHHHHHHHhCCCCHHHHHhccccce
Confidence 33466776665 888999999999999999999997777544332 2222222211000
Q ss_pred -----------------------------------CCCCC-----------CCCChHHHHHHHHHhccCCCCCCCCHHHH
Q 040812 258 -----------------------------------PPSLP-----------ECSSEKFRDFIRCCLQKGDPSKRWTASQL 291 (300)
Q Consensus 258 -----------------------------------~~~~~-----------~~~~~~l~~li~~~l~~~dp~~Rpt~~~~ 291 (300)
....| ......+.|||.+||.. ||.+|+|+.++
T Consensus 421 ff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~-dP~~R~tp~qa 499 (586)
T KOG0667|consen 421 FFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEW-DPAERITPAQA 499 (586)
T ss_pred ehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhcc-CchhcCCHHHH
Confidence 00011 01124579999999999 99999999999
Q ss_pred hcCCCCCC
Q 040812 292 LSHPFLAD 299 (300)
Q Consensus 292 l~hpw~~~ 299 (300)
|+||||..
T Consensus 500 l~Hpfl~~ 507 (586)
T KOG0667|consen 500 LNHPFLTG 507 (586)
T ss_pred hcCccccc
Confidence 99999974
No 65
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=9.8e-45 Score=321.29 Aligned_cols=240 Identities=27% Similarity=0.410 Sum_probs=192.0
Q ss_pred CCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcE
Q 040812 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEV 128 (300)
Q Consensus 54 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 128 (300)
...++|++.+.||+|+||.||+|++..+++.||+|++...... ..+.+|+.+++.++||||+++++++.+.. ..
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~-~~ 118 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDK-YL 118 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCC-EE
Confidence 4567899999999999999999999999999999998643211 12357999999999999999999988755 89
Q ss_pred EEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc------------
Q 040812 129 SILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY------------ 196 (300)
Q Consensus 129 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~------------ 196 (300)
|+||||+++|+|.+++... .+++..+..++.||+.||.|||++||+||||||+|||++.++...+++
T Consensus 119 ~lv~Ey~~gg~L~~~l~~~-~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~ 197 (370)
T cd05596 119 YMVMEYMPGGDLVNLMSNY-DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGM 197 (370)
T ss_pred EEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCc
Confidence 9999999999999998754 689999999999999999999999999999999999998876543222
Q ss_pred --------eeecccccccccc-CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCC--CC
Q 040812 197 --------SCLYESGEARHRK-HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPE--CS 265 (300)
Q Consensus 197 --------~~~~~~~~~~~~~-~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 265 (300)
+..|.+||..... .+..++.++|||||||++|||+||+.||........+..+.. ......++. .+
T Consensus 198 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~---~~~~~~~~~~~~~ 274 (370)
T cd05596 198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMD---HKNSLTFPDDIEI 274 (370)
T ss_pred ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHc---CCCcCCCCCcCCC
Confidence 2335566654322 133467899999999999999999999976443222222211 112233343 46
Q ss_pred ChHHHHHHHHHhccCCCCC--CCCHHHHhcCCCCCC
Q 040812 266 SEKFRDFIRCCLQKGDPSK--RWTASQLLSHPFLAD 299 (300)
Q Consensus 266 ~~~l~~li~~~l~~~dp~~--Rpt~~~~l~hpw~~~ 299 (300)
+.++.++|.+||+. +|.+ |++++++++||||++
T Consensus 275 s~~~~~li~~~L~~-~p~r~~R~s~~ell~h~~~~~ 309 (370)
T cd05596 275 SKQAKDLICAFLTD-REVRLGRNGVDEIKSHPFFKN 309 (370)
T ss_pred CHHHHHHHHHHccC-hhhccCCCCHHHHhcCcccCC
Confidence 89999999999998 9988 999999999999975
No 66
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=3e-44 Score=306.76 Aligned_cols=229 Identities=28% Similarity=0.418 Sum_probs=184.3
Q ss_pred ecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEeccCCCC
Q 040812 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGS 139 (300)
Q Consensus 65 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~~~ 139 (300)
||+|+||.||++.+..+++.||+|.+...... ..+..|+.++++++|+||+++.+++.... ..|+||||+++|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~-~~~lv~e~~~~g~ 79 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKT-DLCLVMTIMNGGD 79 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCC-eEEEEEeCCCCCC
Confidence 79999999999999999999999998654322 22356999999999999999999887754 8999999999999
Q ss_pred HHHHHHh----CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-------------------
Q 040812 140 LEIYVKS----RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY------------------- 196 (300)
Q Consensus 140 L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~------------------- 196 (300)
|.+++.. ...+++..++.++.||+.||.|||++||+||||||+||+++.++...+.+
T Consensus 80 L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g 159 (280)
T cd05608 80 LRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAG 159 (280)
T ss_pred HHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCC
Confidence 9988743 34689999999999999999999999999999999999998765543222
Q ss_pred eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHH
Q 040812 197 SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276 (300)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 276 (300)
+..|.+||... +..++.++|||||||++|||+||+.||................ .......+...++.+.+++.+|
T Consensus 160 ~~~y~aPE~~~---~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~ 235 (280)
T cd05608 160 TPGFMAPELLQ---GEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRI-LNDSVTYPDKFSPASKSFCEAL 235 (280)
T ss_pred CcCccCHHHhc---CCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhh-cccCCCCcccCCHHHHHHHHHH
Confidence 22345555443 4566789999999999999999999997544332222222222 2334455677899999999999
Q ss_pred hccCCCCCCC-----CHHHHhcCCCCCC
Q 040812 277 LQKGDPSKRW-----TASQLLSHPFLAD 299 (300)
Q Consensus 277 l~~~dp~~Rp-----t~~~~l~hpw~~~ 299 (300)
|.. ||++|| +++++++||||++
T Consensus 236 l~~-~P~~R~~~~~~~~~~~l~h~~~~~ 262 (280)
T cd05608 236 LAK-DPEKRLGFRDGNCDGLRTHPLFRD 262 (280)
T ss_pred hcC-CHHHhcCCCCCCHHHHhcChhhhc
Confidence 999 999999 8899999999986
No 67
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.8e-44 Score=313.60 Aligned_cols=227 Identities=27% Similarity=0.455 Sum_probs=186.9
Q ss_pred eeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhc-CCCceeEeceeeeCCCCcEEEEEeccC
Q 040812 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQT-NSPYIVKCHQIFTKPSGEVSILMEYMD 136 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~lv~e~~~ 136 (300)
+.||+|+||.||+|.+..+++.||+|+++..... ....+|..+++.+ +||||+++++++.... ..|+||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~-~~~lv~e~~~ 79 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKD-RLFFVMEYVN 79 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCC-EEEEEEcCCC
Confidence 4699999999999999999999999999754321 1234688888877 6999999999988754 8999999999
Q ss_pred CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-------------------e
Q 040812 137 AGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY-------------------S 197 (300)
Q Consensus 137 ~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~-------------------~ 197 (300)
+++|..++...+.+++..+..++.||+.||.|||++|++||||||+||+++.++...+.+ +
T Consensus 80 ~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~ 159 (318)
T cd05570 80 GGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGT 159 (318)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceecC
Confidence 999999998888899999999999999999999999999999999999998876543222 2
Q ss_pred eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHh
Q 040812 198 CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCL 277 (300)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 277 (300)
..|.+||... +..++.++|||||||++|+|+||+.||...... .....+ .......+...++.+.++|.+||
T Consensus 160 ~~y~aPE~~~---~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~----~~~~~i-~~~~~~~~~~~~~~~~~li~~~l 231 (318)
T cd05570 160 PDYIAPEILS---YQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED----ELFQSI-LEDEVRYPRWLSKEAKSILKSFL 231 (318)
T ss_pred ccccCHHHhc---CCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH----HHHHHH-HcCCCCCCCcCCHHHHHHHHHHc
Confidence 3355555543 556788999999999999999999999654321 222222 23445567778999999999999
Q ss_pred ccCCCCCCCCH-----HHHhcCCCCCC
Q 040812 278 QKGDPSKRWTA-----SQLLSHPFLAD 299 (300)
Q Consensus 278 ~~~dp~~Rpt~-----~~~l~hpw~~~ 299 (300)
.. ||++||++ .++++||||++
T Consensus 232 ~~-dP~~R~s~~~~~~~~ll~~~~~~~ 257 (318)
T cd05570 232 TK-NPEKRLGCLPTGEQDIKGHPFFRE 257 (318)
T ss_pred cC-CHHHcCCCCCCCHHHHhcCCCcCC
Confidence 99 99999999 99999999976
No 68
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=5.5e-44 Score=306.57 Aligned_cols=236 Identities=25% Similarity=0.408 Sum_probs=180.4
Q ss_pred CcceeeeeecCCcceEEEEEEEcc-CCeEEEEEEeecCCCCC----CCHHHHHHHHhc---CCCceeEeceeeeC----C
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQ-TLALYALKVMQCDRGTP----PNPQELNILRQT---NSPYIVKCHQIFTK----P 124 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~----~~~~E~~~l~~l---~h~niv~~~~~~~~----~ 124 (300)
.+|++.+.||+|+||.||+|++.. +++.||+|.++...... ...+|+.+++++ +||||+++++++.. .
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 379999999999999999999854 57889999987543322 235677777665 69999999998742 2
Q ss_pred CCcEEEEEeccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc------
Q 040812 125 SGEVSILMEYMDAGSLEIYVKSR--GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY------ 196 (300)
Q Consensus 125 ~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~------ 196 (300)
....++||||+. ++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++...+.+
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 159 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI 159 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEe
Confidence 346899999997 4999998753 3589999999999999999999999999999999999998776543322
Q ss_pred ------------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCC----
Q 040812 197 ------------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPS---- 260 (300)
Q Consensus 197 ------------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~---- 260 (300)
+..|.+||... +..++.++|||||||++|||++|++||...........+........+..
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~ 236 (290)
T cd07862 160 YSFQMALTSVVVTLWYRAPEVLL---QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 236 (290)
T ss_pred ccCCcccccccccccccChHHHh---CCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhh
Confidence 23355555543 44567899999999999999999999976554333333322111000000
Q ss_pred ------------------CCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 261 ------------------LPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 261 ------------------~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
.....++.++++|.+||+. ||++|||+.++++||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~-~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 237 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTF-NPAKRISAYSALSHPYF 290 (290)
T ss_pred hcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhcc-CchhcCCHHHHhcCCCC
Confidence 1123577889999999999 99999999999999998
No 69
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=6.6e-45 Score=317.31 Aligned_cols=227 Identities=26% Similarity=0.443 Sum_probs=187.1
Q ss_pred eeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEeccCC
Q 040812 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDA 137 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~ 137 (300)
+.||+|+||.||++.+..+++.||+|+++..... ....+|+.+++.++||||+++++++.... ..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~-~~~lv~E~~~~ 79 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD-RLCFVMEYANG 79 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCC-EEEEEEeCCCC
Confidence 4699999999999999999999999999754321 12356889999999999999999988754 89999999999
Q ss_pred CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCceeecCCCCCCccc-------------------e
Q 040812 138 GSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHS-RNIVHRDIKPANVLINEKMEHPCGY-------------------S 197 (300)
Q Consensus 138 ~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~-~~i~H~Dlkp~Nill~~~~~~~~~~-------------------~ 197 (300)
|+|..++.....+++..++.++.||+.||.|||+ .||+||||||+|||++.++...+.+ +
T Consensus 80 ~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt 159 (325)
T cd05594 80 GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGT 159 (325)
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccCC
Confidence 9999999887789999999999999999999997 7999999999999998876543322 2
Q ss_pred eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHh
Q 040812 198 CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCL 277 (300)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 277 (300)
..|.+||... +..++.++|||||||++|||+||..||...... .... ........++...++++.++|.+||
T Consensus 160 ~~y~aPE~~~---~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~----~~~~-~i~~~~~~~p~~~~~~~~~li~~~L 231 (325)
T cd05594 160 PEYLAPEVLE---DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE----KLFE-LILMEEIRFPRTLSPEAKSLLSGLL 231 (325)
T ss_pred cccCCHHHHc---cCCCCCccccccccceeeeeccCCCCCCCCCHH----HHHH-HHhcCCCCCCCCCCHHHHHHHHHHh
Confidence 2345555443 456778999999999999999999999654332 1222 2223445667788999999999999
Q ss_pred ccCCCCCCC-----CHHHHhcCCCCCC
Q 040812 278 QKGDPSKRW-----TASQLLSHPFLAD 299 (300)
Q Consensus 278 ~~~dp~~Rp-----t~~~~l~hpw~~~ 299 (300)
.. ||++|+ ++.++++||||.+
T Consensus 232 ~~-dP~~R~~~~~~~~~~il~h~~~~~ 257 (325)
T cd05594 232 KK-DPKQRLGGGPDDAKEIMQHKFFAG 257 (325)
T ss_pred hc-CHHHhCCCCCCCHHHHhcCCCcCC
Confidence 99 999997 8999999999985
No 70
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=4.5e-44 Score=312.95 Aligned_cols=239 Identities=37% Similarity=0.616 Sum_probs=190.2
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEE
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILM 132 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~ 132 (300)
.++|++.+.||+|+||.||++.+..++..+|+|.+...... ..+.+|++++++++|+||+++++++.... ..|+||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~ 82 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-EISICM 82 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECC-EEEEEE
Confidence 46899999999999999999999999999999998754322 23467999999999999999999998754 899999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhC-CccccCCCCCceeecCCCCCCccc---------------
Q 040812 133 EYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSR-NIVHRDIKPANVLINEKMEHPCGY--------------- 196 (300)
Q Consensus 133 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~-~i~H~Dlkp~Nill~~~~~~~~~~--------------- 196 (300)
||+++++|.+++...+.+++..+..++.|++.||.|||+. +++|+||||+|||++.++...+.+
T Consensus 83 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~ 162 (333)
T cd06650 83 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 162 (333)
T ss_pred ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccccC
Confidence 9999999999998877899999999999999999999975 799999999999998876543222
Q ss_pred --eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchH----------------------------
Q 040812 197 --SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDF---------------------------- 246 (300)
Q Consensus 197 --~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~---------------------------- 246 (300)
+..|.+||... +..++.++|||||||++|+|++|+.||.........
T Consensus 163 ~~~~~y~aPE~~~---~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (333)
T cd06650 163 VGTRSYMSPERLQ---GTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLS 239 (333)
T ss_pred CCCccccCHHHhc---CCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhh
Confidence 22355566543 455778999999999999999999999643221100
Q ss_pred ------------HHHHHHHhhCCCCCCCC-CCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 247 ------------LSLMLAICFREPPSLPE-CSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 247 ------------~~~~~~~~~~~~~~~~~-~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
......+.....+..+. ..+.++++||.+||+. ||++|||++|+++||||+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~-~P~~Rpt~~ell~h~~~~~ 304 (333)
T cd06650 240 SYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIK-NPAERADLKQLMVHAFIKR 304 (333)
T ss_pred hhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccC-CcccCcCHHHHhhCHHHhc
Confidence 00111111122222222 3577899999999999 9999999999999999975
No 71
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.6e-44 Score=314.42 Aligned_cols=227 Identities=25% Similarity=0.399 Sum_probs=185.8
Q ss_pred eeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhc-CCCceeEeceeeeCCCCcEEEEEeccC
Q 040812 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQT-NSPYIVKCHQIFTKPSGEVSILMEYMD 136 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~lv~e~~~ 136 (300)
+.||+|+||.||+|++..+++.||+|+++..... .....|..++..+ +||||+++++++.... ..|+||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~-~~~lv~E~~~ 79 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKD-RLFFVMEYVN 79 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCC-eEEEEEeCCC
Confidence 4699999999999999999999999998754321 1234688888765 7999999999998764 8999999999
Q ss_pred CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-------------------e
Q 040812 137 AGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY-------------------S 197 (300)
Q Consensus 137 ~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~-------------------~ 197 (300)
+++|..++.....+++..+..++.||+.||.|||++||+||||||+|||++.++...+.+ +
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt 159 (321)
T cd05591 80 GGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGT 159 (321)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCccccccccC
Confidence 999999998888899999999999999999999999999999999999999876543322 2
Q ss_pred eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHh
Q 040812 198 CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCL 277 (300)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 277 (300)
..|.+||... +..++.++|||||||++|||+||+.||...... .....+. ......|...+.++.++|.+||
T Consensus 160 ~~y~aPE~~~---~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~----~~~~~i~-~~~~~~p~~~~~~~~~ll~~~L 231 (321)
T cd05591 160 PDYIAPEILQ---ELEYGPSVDWWALGVLMYEMMAGQPPFEADNED----DLFESIL-HDDVLYPVWLSKEAVSILKAFM 231 (321)
T ss_pred ccccCHHHHc---CCCCCCccceechhHHHHHHhcCCCCCCCCCHH----HHHHHHH-cCCCCCCCCCCHHHHHHHHHHh
Confidence 2345555443 455778999999999999999999999754432 2222222 3344566678999999999999
Q ss_pred ccCCCCCCC-------CHHHHhcCCCCCC
Q 040812 278 QKGDPSKRW-------TASQLLSHPFLAD 299 (300)
Q Consensus 278 ~~~dp~~Rp-------t~~~~l~hpw~~~ 299 (300)
.. ||++|+ +++++++||||.+
T Consensus 232 ~~-dp~~R~~~~~~~~~~~~~~~hp~~~~ 259 (321)
T cd05591 232 TK-NPNKRLGCVASQGGEDAIKQHPFFKE 259 (321)
T ss_pred cc-CHHHcCCCCCCCCCHHHHhcCCccCC
Confidence 99 999999 8999999999975
No 72
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.3e-45 Score=305.60 Aligned_cols=232 Identities=28% Similarity=0.424 Sum_probs=194.7
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCC-----HHHHHHHHhcCCCceeEeceeeeCCCCcEEEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-----PQELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~-----~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv 131 (300)
.+|++.+.||+|+||+|-+|.....|+.||||.++++...+.. .+|+++|..++||||++++++|++.. .+.||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkd-KIviv 131 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKD-KIVIV 131 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCc-eEEEE
Confidence 5799999999999999999999999999999999877655432 67999999999999999999999865 89999
Q ss_pred EeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcc----------------
Q 040812 132 MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG---------------- 195 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~---------------- 195 (300)
|||..+|.|.+|+..++.+++.+++.+++||.+|+.|+|.++++|||||.+|||+|.+++.++.
T Consensus 132 MEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfLqT 211 (668)
T KOG0611|consen 132 MEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQT 211 (668)
T ss_pred EEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccccHHHH
Confidence 9999999999999999999999999999999999999999999999999999999998776433
Q ss_pred --ceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHH
Q 040812 196 --YSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFI 273 (300)
Q Consensus 196 --~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 273 (300)
++.+|..||.... ..+.++.+|-|||||+||.|+.|..||.+.+. ...+.++..+.... | ..+.+..-||
T Consensus 212 FCGSPLYASPEIvNG--~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh----k~lvrQIs~GaYrE-P-~~PSdA~gLI 283 (668)
T KOG0611|consen 212 FCGSPLYASPEIVNG--TPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH----KRLVRQISRGAYRE-P-ETPSDASGLI 283 (668)
T ss_pred hcCCcccCCccccCC--CCCCCCccchhhHHHHHHHHhhcccccCCchH----HHHHHHhhcccccC-C-CCCchHHHHH
Confidence 2444555555441 23457899999999999999999999966433 23444443332222 2 2355678999
Q ss_pred HHHhccCCCCCCCCHHHHhcCCCCC
Q 040812 274 RCCLQKGDPSKRWTASQLLSHPFLA 298 (300)
Q Consensus 274 ~~~l~~~dp~~Rpt~~~~l~hpw~~ 298 (300)
..||.. ||++|.|++++..|=|++
T Consensus 284 RwmLmV-NP~RRATieDiAsHWWvN 307 (668)
T KOG0611|consen 284 RWMLMV-NPERRATIEDIASHWWVN 307 (668)
T ss_pred HHHHhc-CcccchhHHHHhhhheee
Confidence 999999 999999999999999975
No 73
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.8e-44 Score=314.19 Aligned_cols=227 Identities=29% Similarity=0.479 Sum_probs=186.2
Q ss_pred eeecCCcceEEEEEEEc---cCCeEEEEEEeecCCC------CCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 63 QVLGQGNGGTVFKVRHK---QTLALYALKVMQCDRG------TPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
+.||+|+||.||++++. .+++.||+|+++.... .....+|+.+++.++||||+++++++..+. ..|+|||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~-~~~lv~e 80 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGG-KLYLILE 80 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCC-eEEEEEe
Confidence 67999999999999874 4688999999875321 112356999999999999999999988754 8999999
Q ss_pred ccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-----------------
Q 040812 134 YMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY----------------- 196 (300)
Q Consensus 134 ~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~----------------- 196 (300)
|+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++...+.+
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 160 (323)
T cd05584 81 YLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTF 160 (323)
T ss_pred CCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCccccc
Confidence 999999999998888899999999999999999999999999999999999998876543322
Q ss_pred --eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHH
Q 040812 197 --SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIR 274 (300)
Q Consensus 197 --~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 274 (300)
+..|.+||... +..++.++|||||||++|||+||+.||...... .....+. .....++...++.+.++|.
T Consensus 161 ~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~li~ 232 (323)
T cd05584 161 CGTIEYMAPEILM---RSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK----KTIDKIL-KGKLNLPPYLTPEARDLLK 232 (323)
T ss_pred CCCccccChhhcc---CCCCCCcceecccHHHHHHHhcCCCCCCCCCHH----HHHHHHH-cCCCCCCCCCCHHHHHHHH
Confidence 23355555543 445677999999999999999999999754432 2222222 2344567778999999999
Q ss_pred HHhccCCCCCCC-----CHHHHhcCCCCCC
Q 040812 275 CCLQKGDPSKRW-----TASQLLSHPFLAD 299 (300)
Q Consensus 275 ~~l~~~dp~~Rp-----t~~~~l~hpw~~~ 299 (300)
+||.. ||++|| +++++++||||..
T Consensus 233 ~~l~~-~p~~R~~~~~~~~~~l~~h~~~~~ 261 (323)
T cd05584 233 KLLKR-NPSSRLGAGPGDAAEVQSHPFFRH 261 (323)
T ss_pred HHccc-CHhHcCCCCCCCHHHHhcCCCcCC
Confidence 99999 999999 8999999999975
No 74
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=3.4e-44 Score=311.49 Aligned_cols=228 Identities=25% Similarity=0.419 Sum_probs=185.1
Q ss_pred eeecCCcceEEEEEEEccCCeEEEEEEeecCCC-----CCCCHHHHHHHHh-cCCCceeEeceeeeCCCCcEEEEEeccC
Q 040812 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG-----TPPNPQELNILRQ-TNSPYIVKCHQIFTKPSGEVSILMEYMD 136 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~lv~e~~~ 136 (300)
+.||+|+||.||+|++..+++.||+|+++.... ......|..++.. ++||||+++++++.... ..|+||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~-~~~lv~ey~~ 79 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKE-NLFFVMEYLN 79 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCC-EEEEEEeCCC
Confidence 469999999999999999999999999975421 1123457777765 58999999999988754 8999999999
Q ss_pred CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-------------------e
Q 040812 137 AGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY-------------------S 197 (300)
Q Consensus 137 ~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~-------------------~ 197 (300)
+|+|.+++.....+++..+..++.|++.||.|||++||+||||||+|||++.++...+.+ +
T Consensus 80 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt 159 (316)
T cd05619 80 GGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGT 159 (316)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecCC
Confidence 999999998877899999999999999999999999999999999999998875543222 2
Q ss_pred eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHh
Q 040812 198 CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCL 277 (300)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 277 (300)
..|.+||... +..++.++|||||||++|||+||..||...+.. .....+. ...+..+...+.+++++|.+||
T Consensus 160 ~~y~aPE~~~---~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~----~~~~~i~-~~~~~~~~~~~~~~~~li~~~l 231 (316)
T cd05619 160 PDYIAPEILL---GQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE----ELFQSIR-MDNPCYPRWLTREAKDILVKLF 231 (316)
T ss_pred ccccCHHHHc---CCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH----HHHHHHH-hCCCCCCccCCHHHHHHHHHHh
Confidence 2355565543 456788999999999999999999999654322 2222222 2334566678999999999999
Q ss_pred ccCCCCCCCCHH-HHhcCCCCCCC
Q 040812 278 QKGDPSKRWTAS-QLLSHPFLADA 300 (300)
Q Consensus 278 ~~~dp~~Rpt~~-~~l~hpw~~~~ 300 (300)
.. ||++||++. ++++||||+++
T Consensus 232 ~~-~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05619 232 VR-EPERRLGVKGDIRQHPFFREI 254 (316)
T ss_pred cc-CHhhcCCChHHHHcCcccCCC
Confidence 99 999999996 99999999763
No 75
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=8.7e-44 Score=308.13 Aligned_cols=240 Identities=25% Similarity=0.383 Sum_probs=187.1
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEE
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv 131 (300)
.+++|++.+.||+|+||.||+|.++.+++.||+|.++..... ....+|+.++++++|+||+++++++..+. ..|+|
T Consensus 4 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~lv 82 (309)
T cd07872 4 KMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDK-SLTLV 82 (309)
T ss_pred CCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCC-eEEEE
Confidence 457899999999999999999999999999999998754322 23467999999999999999999988754 89999
Q ss_pred EeccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc--------------
Q 040812 132 MEYMDAGSLEIYVKSR-GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY-------------- 196 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~-------------- 196 (300)
|||+++ +|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++.++...+.+
T Consensus 83 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 161 (309)
T cd07872 83 FEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTY 161 (309)
T ss_pred EeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCcccc
Confidence 999986 888887654 3589999999999999999999999999999999999998776543322
Q ss_pred -----eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhh----------------
Q 040812 197 -----SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICF---------------- 255 (300)
Q Consensus 197 -----~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~---------------- 255 (300)
+..|.+||.... ...++.++|||||||++|+|+||+.||...+..............
T Consensus 162 ~~~~~~~~y~aPE~~~~--~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
T cd07872 162 SNEVVTLWYRPPDVLLG--SSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFK 239 (309)
T ss_pred ccccccccccCCHHHhC--CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhh
Confidence 222445554321 234677999999999999999999999765443222222111000
Q ss_pred --CCCC-------CCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 256 --REPP-------SLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 256 --~~~~-------~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
..+. .....++++++++|.+||.. ||.+|||+.|+++||||+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~-dp~~R~t~~e~l~h~~~~~ 291 (309)
T cd07872 240 NYNFPKYKPQPLINHAPRLDTEGIELLTKFLQY-ESKKRISAEEAMKHAYFRS 291 (309)
T ss_pred hhhcCccCCCchhhhccCCCHHHHHHHHHhccC-ChhhCCCHHHHhcChhhhh
Confidence 0000 01123578899999999999 9999999999999999975
No 76
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.6e-45 Score=302.80 Aligned_cols=236 Identities=28% Similarity=0.430 Sum_probs=189.1
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHhcCCCceeEeceeeeCCCC----cEEEEEe
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQIFTKPSG----EVSILME 133 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~----~~~lv~e 133 (300)
.|+-.+++|+|+||.||+|...++++.||||.+-.+... ..+|+.+|+.+.|||||++..+|....+ +..+|||
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~--knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVle 102 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY--KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLE 102 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc--CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHH
Confidence 477889999999999999999999999999988665543 2569999999999999999888754322 3668999
Q ss_pred ccCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCC----CCccc---------
Q 040812 134 YMDAGSLEIYVKS----RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKME----HPCGY--------- 196 (300)
Q Consensus 134 ~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~----~~~~~--------- 196 (300)
|++. +|...++. +.+++...++.+..||++||.|||+.||+||||||.|+|+|.+.. +++|.
T Consensus 103 ymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~ep 181 (364)
T KOG0658|consen 103 YMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEP 181 (364)
T ss_pred hchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeeccCCC
Confidence 9987 99988874 567999999999999999999999999999999999999997632 23332
Q ss_pred ------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCC-------CC----
Q 040812 197 ------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFRE-------PP---- 259 (300)
Q Consensus 197 ------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~-------~~---- 259 (300)
+..|.+||.... ...|+.+.||||.||++.||+-|++-|.+.........++....... .+
T Consensus 182 niSYicSRyYRaPELifg--a~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~ 259 (364)
T KOG0658|consen 182 NISYICSRYYRAPELIFG--ATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTE 259 (364)
T ss_pred ceeEEEeccccCHHHHcC--ccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCccccc
Confidence 444666666553 34678899999999999999999999987655444444443321000 00
Q ss_pred -------------CCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 260 -------------SLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 260 -------------~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
.+....+++..+|+.++|+. +|.+|.++.|++.||||.+
T Consensus 260 ~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y-~P~~R~~~~~~l~h~fFde 311 (364)
T KOG0658|consen 260 FKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQY-SPSKRLSALEALAHPFFDE 311 (364)
T ss_pred ccCcccccccceeecccCCCHHHHHHHHHHhcc-ChhhcCCHHHHhcchhhHH
Confidence 02334578999999999999 9999999999999999975
No 77
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1.1e-44 Score=320.08 Aligned_cols=235 Identities=26% Similarity=0.409 Sum_probs=188.1
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv 131 (300)
++|++.+.||+|+||.||+|.++.+++.||+|+++..... ....+|+.++.+++|+||+++++.+.... ..|+|
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~-~~~lv 79 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKR-NLYLI 79 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC-EEEEE
Confidence 4689999999999999999999999999999998743211 12356899999999999999999988764 89999
Q ss_pred EeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc---------------
Q 040812 132 MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY--------------- 196 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~--------------- 196 (300)
|||+++|+|.+++...+.+++..++.++.|++.||.|||++||+||||||+|||++.++...+.+
T Consensus 80 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~ 159 (360)
T cd05627 80 MEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEF 159 (360)
T ss_pred EeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCccccccccccc
Confidence 99999999999998888899999999999999999999999999999999999998775543222
Q ss_pred ---------------------------------------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 040812 197 ---------------------------------------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPF 237 (300)
Q Consensus 197 ---------------------------------------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf 237 (300)
+..|.+||... +..++.++|||||||++|||+||+.||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~---~~~~~~~~DiwSlGvilyel~tG~~Pf 236 (360)
T cd05627 160 YRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFM---QTGYNKLCDWWSLGVIMYEMLIGYPPF 236 (360)
T ss_pred ccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHc---CCCCCCcceeccccceeeecccCCCCC
Confidence 23355555543 455778999999999999999999999
Q ss_pred CCCCCCchHHHHHHHHhhCCCCCCCC--CCChHHHHHHHHHhccCCCCCCC---CHHHHhcCCCCCCC
Q 040812 238 LEPGQEPDFLSLMLAICFREPPSLPE--CSSEKFRDFIRCCLQKGDPSKRW---TASQLLSHPFLADA 300 (300)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~li~~~l~~~dp~~Rp---t~~~~l~hpw~~~~ 300 (300)
...........+.. ......+|. ..+++++++|.+++ . ||.+|+ +++++++||||+++
T Consensus 237 ~~~~~~~~~~~i~~---~~~~~~~p~~~~~s~~~~~li~~l~-~-~p~~R~~~~~~~ei~~hp~f~~~ 299 (360)
T cd05627 237 CSETPQETYRKVMN---WKETLVFPPEVPISEKAKDLILRFC-T-DSENRIGSNGVEEIKSHPFFEGV 299 (360)
T ss_pred CCCCHHHHHHHHHc---CCCceecCCCCCCCHHHHHHHHHhc-c-ChhhcCCCCCHHHHhcCCCCCCC
Confidence 76543322222211 111222232 36889999999976 6 899998 48999999999863
No 78
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=5.4e-44 Score=311.29 Aligned_cols=232 Identities=26% Similarity=0.423 Sum_probs=189.3
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC-----CCHHHHHHHHhc-CCCceeEeceeeeCCCCcEEEE
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP-----PNPQELNILRQT-NSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~lv 131 (300)
+|++.+.||+|+||.||+|++..+++.||+|++....... ....|..++..+ .|++|+.+++++.... ..|+|
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~-~~~lv 79 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMD-RLYFV 79 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCC-EEEEE
Confidence 4889999999999999999999999999999987643221 124467777766 5789999999987754 89999
Q ss_pred EeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc---------------
Q 040812 132 MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY--------------- 196 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~--------------- 196 (300)
|||+++|+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++...+.+
T Consensus 80 ~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~ 159 (323)
T cd05616 80 MEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTK 159 (323)
T ss_pred EcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCccc
Confidence 99999999999998888899999999999999999999999999999999999999876543222
Q ss_pred ----eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHH
Q 040812 197 ----SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDF 272 (300)
Q Consensus 197 ----~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 272 (300)
+..|.+||... +..++.++|||||||++|||+||+.||...... .....+. .....+|...++++.++
T Consensus 160 ~~~gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~----~~~~~i~-~~~~~~p~~~s~~~~~l 231 (323)
T cd05616 160 TFCGTPDYIAPEIIA---YQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED----ELFQSIM-EHNVAYPKSMSKEAVAI 231 (323)
T ss_pred cCCCChhhcCHHHhc---CCCCCCccchhchhHHHHHHHhCCCCCCCCCHH----HHHHHHH-hCCCCCCCcCCHHHHHH
Confidence 23355555543 456788999999999999999999999654332 2222222 33455677889999999
Q ss_pred HHHHhccCCCCCCCCH-----HHHhcCCCCCC
Q 040812 273 IRCCLQKGDPSKRWTA-----SQLLSHPFLAD 299 (300)
Q Consensus 273 i~~~l~~~dp~~Rpt~-----~~~l~hpw~~~ 299 (300)
+.+||+. ||++|++. .++++||||+.
T Consensus 232 i~~~l~~-~p~~R~~~~~~~~~~i~~h~~~~~ 262 (323)
T cd05616 232 CKGLMTK-HPGKRLGCGPEGERDIKEHAFFRY 262 (323)
T ss_pred HHHHccc-CHHhcCCCCCCCHHHHhcCCCcCC
Confidence 9999999 99999984 89999999975
No 79
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=4.2e-44 Score=310.95 Aligned_cols=227 Identities=26% Similarity=0.458 Sum_probs=183.7
Q ss_pred eeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHh-cCCCceeEeceeeeCCCCcEEEEEeccC
Q 040812 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQ-TNSPYIVKCHQIFTKPSGEVSILMEYMD 136 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~lv~e~~~ 136 (300)
+.||+|+||.||+|.+..+++.||+|+++..... .....|..++.. .+||||+++++++.... ..|+||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~-~~~lv~e~~~ 79 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKE-HLFFVMEYLN 79 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCC-EEEEEEcCCC
Confidence 4699999999999999999999999999754321 112346666654 48999999999988754 8999999999
Q ss_pred CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-------------------e
Q 040812 137 AGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY-------------------S 197 (300)
Q Consensus 137 ~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~-------------------~ 197 (300)
+|+|..++.....+++..+..++.||+.||.|||++||+||||||+|||++.++...+.+ +
T Consensus 80 gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt 159 (316)
T cd05592 80 GGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGT 159 (316)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccCC
Confidence 999999998888899999999999999999999999999999999999998775543222 2
Q ss_pred eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHh
Q 040812 198 CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCL 277 (300)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 277 (300)
..|.+||... +..++.++|||||||++|||++|+.||...+.. .....+ ....+.++...+.++.++|.+||
T Consensus 160 ~~y~aPE~~~---~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~----~~~~~i-~~~~~~~~~~~~~~~~~ll~~~l 231 (316)
T cd05592 160 PDYIAPEILK---GQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED----ELFDSI-LNDRPHFPRWISKEAKDCLSKLF 231 (316)
T ss_pred ccccCHHHHc---CCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH----HHHHHH-HcCCCCCCCCCCHHHHHHHHHHc
Confidence 3345555443 455778999999999999999999999754332 222222 23455677788999999999999
Q ss_pred ccCCCCCCCCH-HHHhcCCCCCC
Q 040812 278 QKGDPSKRWTA-SQLLSHPFLAD 299 (300)
Q Consensus 278 ~~~dp~~Rpt~-~~~l~hpw~~~ 299 (300)
.. ||++||++ .++++||||++
T Consensus 232 ~~-~P~~R~~~~~~l~~h~~~~~ 253 (316)
T cd05592 232 ER-DPTKRLGVDGDIRQHPFFRG 253 (316)
T ss_pred cC-CHHHcCCChHHHHcCcccCC
Confidence 99 99999986 58999999975
No 80
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=5.8e-44 Score=322.61 Aligned_cols=239 Identities=23% Similarity=0.364 Sum_probs=183.1
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHhcCCCceeEeceeeeCC-------CCc
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQIFTKP-------SGE 127 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-------~~~ 127 (300)
...+|++.+.||+|+||.||+|.+..+++.||||.+..+. ....+|+.+|++++|+||+++++++... ...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~--~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 141 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP--QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIF 141 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc--chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceE
Confidence 3467999999999999999999999999999999885432 2235799999999999999998876321 124
Q ss_pred EEEEEeccCCCCHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCC-C---Cccc---
Q 040812 128 VSILMEYMDAGSLEIYVK----SRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKME-H---PCGY--- 196 (300)
Q Consensus 128 ~~lv~e~~~~~~L~~~l~----~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~-~---~~~~--- 196 (300)
+++||||+++ +|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++. . ++|.
T Consensus 142 l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~ 220 (440)
T PTZ00036 142 LNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKN 220 (440)
T ss_pred EEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccchh
Confidence 7799999986 7776664 3456999999999999999999999999999999999999986532 2 2221
Q ss_pred ------------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhC--------
Q 040812 197 ------------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFR-------- 256 (300)
Q Consensus 197 ------------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~-------- 256 (300)
+..|.+||.... ...++.++|||||||++|||+||.+||.+.........++......
T Consensus 221 ~~~~~~~~~~~~t~~y~aPE~~~~--~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~ 298 (440)
T PTZ00036 221 LLAGQRSVSYICSRFYRAPELMLG--ATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEM 298 (440)
T ss_pred ccCCCCcccCCCCcCccCHHHhcC--CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHh
Confidence 233556665321 2357789999999999999999999997654433322222211000
Q ss_pred ----------------CCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 257 ----------------EPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 257 ----------------~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
....+|...++++.+||.+||+. ||++|||+.|+++||||.+
T Consensus 299 ~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~-dP~~R~ta~e~l~hp~f~~ 356 (440)
T PTZ00036 299 NPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKY-EPLKRLNPIEALADPFFDD 356 (440)
T ss_pred chhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCC-ChhHCcCHHHHhCChhHHh
Confidence 00113445678999999999999 9999999999999999964
No 81
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=3.6e-43 Score=297.09 Aligned_cols=233 Identities=30% Similarity=0.426 Sum_probs=192.4
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-------CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-------PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVS 129 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 129 (300)
++|++.+.||+|+||.||+|.+..+++.||+|.+...... ..+.+|+.++++++||||+++++++.... ..+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~ 80 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDE-TLS 80 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCC-eEE
Confidence 4688999999999999999999999999999998754322 12356999999999999999999988765 899
Q ss_pred EEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-------------
Q 040812 130 ILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY------------- 196 (300)
Q Consensus 130 lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~------------- 196 (300)
+|+||+++++|.+++...+.+++..++.++.|++.||.|||+.|++|+||+|+||+++.++...+.+
T Consensus 81 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~ 160 (263)
T cd06625 81 IFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSS 160 (263)
T ss_pred EEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceeccccccc
Confidence 9999999999999998877899999999999999999999999999999999999999875543222
Q ss_pred ---------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCCh
Q 040812 197 ---------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSE 267 (300)
Q Consensus 197 ---------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (300)
...|.+||... +...+.++|||||||++|||++|+.||....... ..............+...+.
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 234 (263)
T cd06625 161 GTGMKSVTGTPYWMSPEVIS---GEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMA---AIFKIATQPTNPQLPSHVSP 234 (263)
T ss_pred cccccCCCcCccccCcceec---cCCCCchhhhHHHHHHHHHHHhCCCCccccchHH---HHHHHhccCCCCCCCccCCH
Confidence 12345555543 3446789999999999999999999996543221 22222233344566778899
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 268 KFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 268 ~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
.+.++|.+||.. +|++|||+.++++||||
T Consensus 235 ~~~~li~~~l~~-~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 235 DARNFLRRTFVE-NAKKRPSAEELLRHFFV 263 (263)
T ss_pred HHHHHHHHHhhc-CcccCCCHHHHhhCCCC
Confidence 999999999999 99999999999999998
No 82
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1e-43 Score=309.93 Aligned_cols=232 Identities=26% Similarity=0.436 Sum_probs=188.6
Q ss_pred eeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC-----CCHHHHHHHHhc-CCCceeEeceeeeCCCCcEEEEEeccC
Q 040812 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP-----PNPQELNILRQT-NSPYIVKCHQIFTKPSGEVSILMEYMD 136 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~lv~e~~~ 136 (300)
+.||+|+||.||+|++..+++.||+|+++...... ...+|+.++.++ +|+||+.+++++.... .+|+||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~-~~~lv~e~~~ 79 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTS-RLFLVIEYVN 79 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCC-EEEEEEeCCC
Confidence 46999999999999999999999999997643221 235688888887 6999999999988754 8999999999
Q ss_pred CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-------------------e
Q 040812 137 AGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY-------------------S 197 (300)
Q Consensus 137 ~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~-------------------~ 197 (300)
+|+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++...+.+ +
T Consensus 80 ~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt 159 (327)
T cd05617 80 GGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGT 159 (327)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccCC
Confidence 999999998877899999999999999999999999999999999999998876543322 2
Q ss_pred eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCC--chHHHHHHHHhhCCCCCCCCCCChHHHHHHHH
Q 040812 198 CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQE--PDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275 (300)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 275 (300)
..|.+||... +..++.++|||||||++|||+||..||...... ..............+...|...+..+.++|.+
T Consensus 160 ~~y~aPE~~~---~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~ 236 (327)
T cd05617 160 PNYIAPEILR---GEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLSVKASHVLKG 236 (327)
T ss_pred cccCCHHHHC---CCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 2345555443 556788999999999999999999999643221 12222333333445566788889999999999
Q ss_pred HhccCCCCCCCC------HHHHhcCCCCCC
Q 040812 276 CLQKGDPSKRWT------ASQLLSHPFLAD 299 (300)
Q Consensus 276 ~l~~~dp~~Rpt------~~~~l~hpw~~~ 299 (300)
||.. ||++|++ ++++++||||++
T Consensus 237 ~L~~-dP~~R~~~~~~~~~~~i~~h~~f~~ 265 (327)
T cd05617 237 FLNK-DPKERLGCQPQTGFSDIKSHTFFRS 265 (327)
T ss_pred Hhcc-CHHHcCCCCCCCCHHHHHcCCCCCC
Confidence 9999 9999998 579999999976
No 83
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=2.1e-43 Score=302.62 Aligned_cols=235 Identities=25% Similarity=0.395 Sum_probs=180.8
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC----CCHHHHHHHHhc---CCCceeEeceeeeCC----CC
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP----PNPQELNILRQT---NSPYIVKCHQIFTKP----SG 126 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~E~~~l~~l---~h~niv~~~~~~~~~----~~ 126 (300)
+|++.+.||+|+||.||+|.++.+++.||+|.++...... ...+|+.+++.+ +||||+++++++... ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 5899999999999999999999999999999987543222 234577777655 799999999987542 23
Q ss_pred cEEEEEeccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc--------
Q 040812 127 EVSILMEYMDAGSLEIYVKSR--GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY-------- 196 (300)
Q Consensus 127 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~-------- 196 (300)
..++||||+.+ +|.+++... ..+++..++.++.|++.||.|||++|++||||||+||+++.++...+.+
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~ 159 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYS 159 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCcccccc
Confidence 58999999985 898888753 3489999999999999999999999999999999999998776543222
Q ss_pred ----------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCC--------
Q 040812 197 ----------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREP-------- 258 (300)
Q Consensus 197 ----------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~-------- 258 (300)
+..|.+||... +..++.++|||||||++|+|++|.+||...........+.........
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (288)
T cd07863 160 CQMALTPVVVTLWYRAPEVLL---QSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVT 236 (288)
T ss_pred CcccCCCccccccccCchHhh---CCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccccc
Confidence 23356666543 455788999999999999999999999655433222222221110000
Q ss_pred --------------CCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 259 --------------PSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 259 --------------~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
......+++.+.++|.+||+. ||++|||+.++++||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~-dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 237 LPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTF-NPHKRISAFRALQHPFF 288 (288)
T ss_pred ccccccCCCCCCchHHhCcCcCHHHHHHHHHHhcc-CcccCCCHHHHhcCCCC
Confidence 001124577889999999999 99999999999999998
No 84
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=2.6e-43 Score=300.52 Aligned_cols=230 Identities=26% Similarity=0.354 Sum_probs=181.5
Q ss_pred ecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEeccCCCC
Q 040812 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGS 139 (300)
Q Consensus 65 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~~~ 139 (300)
||+|+||.||+++++.+++.||+|.+...... .....|+.++++++||||+++++++.... ..|+||||+++++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~-~~~lv~e~~~g~~ 79 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKT-HLCLVMSLMNGGD 79 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCC-eEEEEEecCCCCC
Confidence 79999999999999999999999998643221 22346999999999999999999988754 8999999999999
Q ss_pred HHHHHHhCC--CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc------------------eee
Q 040812 140 LEIYVKSRG--RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY------------------SCL 199 (300)
Q Consensus 140 L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~------------------~~~ 199 (300)
|.+++.... .+++..+..++.||+.||.|||+.|++||||||+||+++.++...+.+ +..
T Consensus 80 L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~ 159 (277)
T cd05607 80 LKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNG 159 (277)
T ss_pred HHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCCCC
Confidence 998886533 488999999999999999999999999999999999998775542221 223
Q ss_pred ccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHhcc
Q 040812 200 YESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQK 279 (300)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~ 279 (300)
|.+||... +..++.++|||||||++|||++|..||............................+++++++|.+||+.
T Consensus 160 y~aPE~~~---~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 236 (277)
T cd05607 160 YMAPEILK---EEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAK 236 (277)
T ss_pred ccCHHHHc---cCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHHhcc
Confidence 45555443 445778999999999999999999999754333222222222222222222346789999999999999
Q ss_pred CCCCCCCCH----HHHhcCCCCCC
Q 040812 280 GDPSKRWTA----SQLLSHPFLAD 299 (300)
Q Consensus 280 ~dp~~Rpt~----~~~l~hpw~~~ 299 (300)
||++||++ +++++||||+.
T Consensus 237 -~P~~R~~~~~~~~~~~~h~~f~~ 259 (277)
T cd05607 237 -KPEDRLGSREKNDDPRKHEFFKT 259 (277)
T ss_pred -CHhhCCCCccchhhhhcChhhcC
Confidence 99999999 77889999975
No 85
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=7.2e-44 Score=311.43 Aligned_cols=241 Identities=26% Similarity=0.348 Sum_probs=185.8
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv 131 (300)
++|++.+.||+|+||.||++++..+++.||+|++...... ..+.+|+.++..++|+||+.+++++.... ..|+|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-~~~lv 79 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDEN-NLYLV 79 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCC-eEEEE
Confidence 4799999999999999999999999999999998642211 22456899999999999999999998764 89999
Q ss_pred EeccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcc---------------
Q 040812 132 MEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG--------------- 195 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~--------------- 195 (300)
|||+++|+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++...+.
T Consensus 80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 159 (331)
T cd05597 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQ 159 (331)
T ss_pred EecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCcc
Confidence 999999999999976 4579999999999999999999999999999999999999876543221
Q ss_pred -----ceeeccccccccccC--CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChH
Q 040812 196 -----YSCLYESGEARHRKH--GGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEK 268 (300)
Q Consensus 196 -----~~~~~~~~~~~~~~~--~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (300)
++..|.+||...... ...++.++|||||||++|||++|+.||...........+.........+......++.
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 239 (331)
T cd05597 160 SNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEE 239 (331)
T ss_pred ccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHH
Confidence 233455666543211 2345678999999999999999999996543322221211110001111222347889
Q ss_pred HHHHHHHHhccCCCC--CCCCHHHHhcCCCCCC
Q 040812 269 FRDFIRCCLQKGDPS--KRWTASQLLSHPFLAD 299 (300)
Q Consensus 269 l~~li~~~l~~~dp~--~Rpt~~~~l~hpw~~~ 299 (300)
++++|.+||.. +++ .|++++++++||||++
T Consensus 240 ~~~li~~ll~~-~~~r~~r~~~~~~l~hp~~~~ 271 (331)
T cd05597 240 AKDLIRRLICS-PETRLGRNGLQDFKDHPFFEG 271 (331)
T ss_pred HHHHHHHHccC-cccccCCCCHHHHhcCCCCCC
Confidence 99999998865 444 3889999999999975
No 86
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.4e-43 Score=311.60 Aligned_cols=238 Identities=25% Similarity=0.336 Sum_probs=183.0
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC----CCCHHHHHHHHhcCCCceeEeceeeeCCC-----
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT----PPNPQELNILRQTNSPYIVKCHQIFTKPS----- 125 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~----- 125 (300)
-.++|++.+.||+|+||.||++.+..+++.||+|.+...... ....+|+.+++.++||||+++++++....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 357899999999999999999999999999999998654222 23357999999999999999999886432
Q ss_pred CcEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc---------
Q 040812 126 GEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY--------- 196 (300)
Q Consensus 126 ~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~--------- 196 (300)
...|+||||+++ +|.+.+.. .+++..+..++.||+.||.|||++||+||||||+|||++.++...+.+
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~ 175 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACT 175 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCcccccc
Confidence 247999999976 66666643 488999999999999999999999999999999999999876543322
Q ss_pred ---------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHH---------------
Q 040812 197 ---------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLA--------------- 252 (300)
Q Consensus 197 ---------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~--------------- 252 (300)
+..|.+||... +..++.++|||||||++|+|+||+.||...+....+......
T Consensus 176 ~~~~~~~~~t~~y~aPE~~~---~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (359)
T cd07876 176 NFMMTPYVVTRYYRAPEVIL---GMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPT 252 (359)
T ss_pred CccCCCCcccCCCCCchhcc---CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 22356666543 556778999999999999999999999765432211111110
Q ss_pred ---HhhCCC-------------------CCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 253 ---ICFREP-------------------PSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 253 ---~~~~~~-------------------~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
.....+ .......++.+++||.+||.. ||++|||+.|+++||||..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~-dP~~R~t~~e~l~hp~~~~ 320 (359)
T cd07876 253 VRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVI-DPDKRISVDEALRHPYITV 320 (359)
T ss_pred HHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhcc-CcccCCCHHHHhcCchhhh
Confidence 000000 001122357799999999999 9999999999999999863
No 87
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=4.3e-44 Score=311.89 Aligned_cols=227 Identities=26% Similarity=0.396 Sum_probs=182.8
Q ss_pred eeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC-----CCHHHHH-HHHhcCCCceeEeceeeeCCCCcEEEEEeccC
Q 040812 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP-----PNPQELN-ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMD 136 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~ 136 (300)
+.||+|+||.||+|++..+++.||+|++....... ....|.. +++.++||||+++++++.... ..|+||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~-~~~lv~e~~~ 79 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTAD-KLYFVLDYVN 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCC-EEEEEEcCCC
Confidence 46999999999999999999999999987532211 1223433 457799999999999988754 8999999999
Q ss_pred CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-------------------e
Q 040812 137 AGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY-------------------S 197 (300)
Q Consensus 137 ~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~-------------------~ 197 (300)
+|+|..++.....+++..++.++.||+.||.|||++||+||||||+|||++.++...+.+ +
T Consensus 80 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt 159 (323)
T cd05575 80 GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGT 159 (323)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccCC
Confidence 999999998888899999999999999999999999999999999999998876543322 2
Q ss_pred eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHh
Q 040812 198 CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCL 277 (300)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 277 (300)
..|.+||... +..++.++|||||||++|||++|..||...+.. .....+. ......+...++.+.++|.+||
T Consensus 160 ~~y~aPE~~~---~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~----~~~~~i~-~~~~~~~~~~~~~~~~li~~~l 231 (323)
T cd05575 160 PEYLAPEVLR---KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTA----EMYDNIL-NKPLRLKPNISVSARHLLEGLL 231 (323)
T ss_pred hhhcChhhhc---CCCCCccccccccchhhhhhhcCCCCCCCCCHH----HHHHHHH-cCCCCCCCCCCHHHHHHHHHHh
Confidence 2355555543 456778999999999999999999999654321 2222222 3344555667999999999999
Q ss_pred ccCCCCCCCCH----HHHhcCCCCCC
Q 040812 278 QKGDPSKRWTA----SQLLSHPFLAD 299 (300)
Q Consensus 278 ~~~dp~~Rpt~----~~~l~hpw~~~ 299 (300)
+. ||++||++ .++++||||++
T Consensus 232 ~~-~p~~R~~~~~~~~~il~~~~~~~ 256 (323)
T cd05575 232 QK-DRTKRLGAKDDFLEIKNHVFFSS 256 (323)
T ss_pred hc-CHHhCCCCCCCHHHHHcCCCcCC
Confidence 99 99999987 69999999975
No 88
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=2.1e-43 Score=302.35 Aligned_cols=236 Identities=22% Similarity=0.347 Sum_probs=189.7
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC-----CCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEE
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP-----PNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILM 132 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~ 132 (300)
+|+..+.||+|+||.||++.+..+++.||+|.+....... ...+|+.++++++|+|++.+++.+.... ..|+||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~-~~~lv~ 79 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKD-ALCLVL 79 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCC-EEEEEE
Confidence 4788899999999999999999999999999986543221 2356999999999999999999987754 899999
Q ss_pred eccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc--------------
Q 040812 133 EYMDAGSLEIYVKSR--GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY-------------- 196 (300)
Q Consensus 133 e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~-------------- 196 (300)
||+++++|.+++... ..+++..+..++.|++.||.|||+.|++||||||+||+++.++...+.+
T Consensus 80 e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 159 (285)
T cd05630 80 TLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIK 159 (285)
T ss_pred EecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCcccc
Confidence 999999999988643 3589999999999999999999999999999999999998765432222
Q ss_pred ----eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHH
Q 040812 197 ----SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDF 272 (300)
Q Consensus 197 ----~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 272 (300)
+..|.+||... +..++.++|||||||++|+|++|+.||......... ..............+...++++.++
T Consensus 160 ~~~g~~~y~aPE~~~---~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l 235 (285)
T cd05630 160 GRVGTVGYMAPEVVK---NERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR-EEVERLVKEVQEEYSEKFSPDARSL 235 (285)
T ss_pred CCCCCccccChHHHc---CCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchH-HHHHhhhhhhhhhcCccCCHHHHHH
Confidence 23455555543 445778999999999999999999999764432211 1122222222334566788999999
Q ss_pred HHHHhccCCCCCCCC-----HHHHhcCCCCCC
Q 040812 273 IRCCLQKGDPSKRWT-----ASQLLSHPFLAD 299 (300)
Q Consensus 273 i~~~l~~~dp~~Rpt-----~~~~l~hpw~~~ 299 (300)
+.+||+. ||++||| ++|+++||||++
T Consensus 236 i~~~l~~-~p~~R~s~~~~~~~~~~~h~~~~~ 266 (285)
T cd05630 236 CKMLLCK-DPKERLGCQGGGAREVKEHPLFKQ 266 (285)
T ss_pred HHHHhhc-CHHHccCCCCCchHHHHcChhhhc
Confidence 9999999 9999999 999999999975
No 89
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1.5e-43 Score=310.46 Aligned_cols=232 Identities=24% Similarity=0.355 Sum_probs=183.9
Q ss_pred CCCcceeeeeecCCcceEEEEEEEc-----cCCeEEEEEEeecCCCC---CCCHHHHHHHHhc-CCCceeEeceeeeCCC
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHK-----QTLALYALKVMQCDRGT---PPNPQELNILRQT-NSPYIVKCHQIFTKPS 125 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 125 (300)
..++|++.+.||+|+||.||+|.+. .+++.||+|+++..... ..+.+|+.++.++ +||||+++++++....
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 4568999999999999999999852 34578999998753322 2346799999999 8999999999887666
Q ss_pred CcEEEEEeccCCCCHHHHHHhC----------------------------------------------------------
Q 040812 126 GEVSILMEYMDAGSLEIYVKSR---------------------------------------------------------- 147 (300)
Q Consensus 126 ~~~~lv~e~~~~~~L~~~l~~~---------------------------------------------------------- 147 (300)
+.+++||||+++|+|.+++...
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 5799999999999999998742
Q ss_pred ----CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce---------------------eeccc
Q 040812 148 ----GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS---------------------CLYES 202 (300)
Q Consensus 148 ----~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~---------------------~~~~~ 202 (300)
..+++..+..++.||+.||.|||++||+||||||+|||++.++...++++ ..|.+
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~a 244 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMA 244 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccC
Confidence 23677888999999999999999999999999999999987655433221 23555
Q ss_pred cccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHhccCC
Q 040812 203 GEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGD 281 (300)
Q Consensus 203 ~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~d 281 (300)
||... +..++.++|||||||++|||+| |..||........... ..........+...++.+.++|.+||.. |
T Consensus 245 PE~~~---~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~li~~cl~~-d 317 (338)
T cd05102 245 PESIF---DKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQ---RLKDGTRMRAPENATPEIYRIMLACWQG-D 317 (338)
T ss_pred cHHhh---cCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHH---HHhcCCCCCCCCCCCHHHHHHHHHHccC-C
Confidence 55443 4557789999999999999997 9999976544332222 2222334455677889999999999999 9
Q ss_pred CCCCCCHHHHhc
Q 040812 282 PSKRWTASQLLS 293 (300)
Q Consensus 282 p~~Rpt~~~~l~ 293 (300)
|++|||+.++++
T Consensus 318 p~~RPs~~el~~ 329 (338)
T cd05102 318 PKERPTFSALVE 329 (338)
T ss_pred hhhCcCHHHHHH
Confidence 999999999975
No 90
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=6.2e-44 Score=315.94 Aligned_cols=240 Identities=26% Similarity=0.396 Sum_probs=190.0
Q ss_pred CCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcE
Q 040812 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEV 128 (300)
Q Consensus 54 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 128 (300)
...++|++.+.||+|+||.||++++..+++.||+|++...... ..+.+|+.+++.++||||+++++++..+. ..
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~-~~ 118 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDK-YL 118 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC-EE
Confidence 3457899999999999999999999999999999998642211 12357999999999999999999998764 89
Q ss_pred EEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcc-------------
Q 040812 129 SILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG------------- 195 (300)
Q Consensus 129 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~------------- 195 (300)
|+||||+++|+|.+++... .+++..++.++.||+.||.|||++||+||||||+|||++.++..++.
T Consensus 119 ~lv~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~ 197 (370)
T cd05621 119 YMVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGM 197 (370)
T ss_pred EEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCCc
Confidence 9999999999999999754 68999999999999999999999999999999999999876543222
Q ss_pred -------ceeeccccccccccC-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCC--CC
Q 040812 196 -------YSCLYESGEARHRKH-GGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPE--CS 265 (300)
Q Consensus 196 -------~~~~~~~~~~~~~~~-~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 265 (300)
++..|.+||...... .+.++.++|||||||++|||+||+.||...........++. ......+|. ..
T Consensus 198 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~---~~~~~~~p~~~~~ 274 (370)
T cd05621 198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMD---HKNSLNFPEDVEI 274 (370)
T ss_pred eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHh---CCcccCCCCcccC
Confidence 233466666654322 23467899999999999999999999976543222222211 112233333 46
Q ss_pred ChHHHHHHHHHhccCCCCC--CCCHHHHhcCCCCCC
Q 040812 266 SEKFRDFIRCCLQKGDPSK--RWTASQLLSHPFLAD 299 (300)
Q Consensus 266 ~~~l~~li~~~l~~~dp~~--Rpt~~~~l~hpw~~~ 299 (300)
+..++++|.+||.. ++.+ |++++++++||||++
T Consensus 275 s~~~~~li~~~L~~-~~~r~~R~~~~e~l~hp~~~~ 309 (370)
T cd05621 275 SKHAKNLICAFLTD-REVRLGRNGVEEIKQHPFFKN 309 (370)
T ss_pred CHHHHHHHHHHccC-chhccCCCCHHHHhcCcccCC
Confidence 88999999999976 6544 899999999999975
No 91
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=3e-44 Score=313.79 Aligned_cols=237 Identities=28% Similarity=0.398 Sum_probs=189.4
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCC-----CCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG-----TPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv 131 (300)
++|++.+.||+|+||.||+|+++.+++.||+|+++.... ...+.+|+.+++.++|+||+++++++.... ..|+|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~-~~~lv 79 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKD-NLYLV 79 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCC-eEEEE
Confidence 468999999999999999999999999999999975432 122356899999999999999999988754 89999
Q ss_pred EeccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc--------------
Q 040812 132 MEYMDAGSLEIYVKSR-GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY-------------- 196 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~-------------- 196 (300)
|||+++|+|.+++... ..+++..++.++.||+.||.|||+.||+||||||+|||++.++...+.+
T Consensus 80 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~ 159 (330)
T cd05601 80 MEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVN 159 (330)
T ss_pred ECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCcee
Confidence 9999999999999875 6799999999999999999999999999999999999999876543222
Q ss_pred ------eeeccccccccccC---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCC--CCC
Q 040812 197 ------SCLYESGEARHRKH---GGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLP--ECS 265 (300)
Q Consensus 197 ------~~~~~~~~~~~~~~---~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 265 (300)
+..|.+||...... +..++.++|||||||++|||+||+.||........+..+... .....++ ...
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~---~~~~~~~~~~~~ 236 (330)
T cd05601 160 SKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNF---QRFLKFPEDPKV 236 (330)
T ss_pred eecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcC---CCccCCCCCCCC
Confidence 22355666543211 345677999999999999999999999765433222222111 1112223 246
Q ss_pred ChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 266 SEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 266 ~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
++.+.++|.+|| . ||++|||++++++||||.+
T Consensus 237 ~~~~~~li~~ll-~-~p~~R~t~~~l~~h~~~~~ 268 (330)
T cd05601 237 SSDFLDLIQSLL-C-GQKERLGYEGLCCHPFFSK 268 (330)
T ss_pred CHHHHHHHHHHc-c-ChhhCCCHHHHhCCCCcCC
Confidence 889999999999 5 8999999999999999975
No 92
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.4e-43 Score=309.24 Aligned_cols=236 Identities=27% Similarity=0.323 Sum_probs=180.4
Q ss_pred eeeeecCC--cceEEEEEEEccCCeEEEEEEeecCCCCC----CCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEec
Q 040812 61 KLQVLGQG--NGGTVFKVRHKQTLALYALKVMQCDRGTP----PNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEY 134 (300)
Q Consensus 61 ~~~~lg~G--~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~ 134 (300)
++++||+| +|++||++.++.+++.||+|.+....... ...+|+.+++.++||||+++++++..+. ..|+||||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~-~~~lv~e~ 80 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN-ELWVVTSF 80 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECC-EEEEEEec
Confidence 56789999 78999999999999999999987543222 2356999999999999999999998765 89999999
Q ss_pred cCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc----------------
Q 040812 135 MDAGSLEIYVKSR--GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY---------------- 196 (300)
Q Consensus 135 ~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~---------------- 196 (300)
+++|+|.+++... ..+++..++.++.|++.||.|||++||+||||||+|||++.++.....+
T Consensus 81 ~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~ 160 (327)
T cd08227 81 MAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRV 160 (327)
T ss_pred cCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccccccccc
Confidence 9999999999653 3589999999999999999999999999999999999998764332111
Q ss_pred ----------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhC----------
Q 040812 197 ----------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFR---------- 256 (300)
Q Consensus 197 ----------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~---------- 256 (300)
...|.+||..... ...++.++|||||||++|||+||+.||...................
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (327)
T cd08227 161 VHDFPKYSVKVLPWLSPEVLQQN-LQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAE 239 (327)
T ss_pred cccccccccceecccChHHhhcc-cCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhh
Confidence 1225566654321 1346789999999999999999999996533222111111000000
Q ss_pred -----------------------C--------CCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 257 -----------------------E--------PPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 257 -----------------------~--------~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
. ........++.+.+||.+||+. ||++|||++++++||||++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~-dP~~Rpt~~ell~~p~f~~ 312 (327)
T cd08227 240 ELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQR-NPDARPSASTLLNHSFFKQ 312 (327)
T ss_pred hcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhh-CchhcCCHHHHhcChhhhh
Confidence 0 0001123467899999999999 9999999999999999975
No 93
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.6e-43 Score=308.24 Aligned_cols=232 Identities=26% Similarity=0.418 Sum_probs=188.2
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhcCC-CceeEeceeeeCCCCcEEEE
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTNS-PYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~~lv 131 (300)
+|+..+.||+|+||.||+|+++.+++.||+|++...... .....|..++..+.| ++|+++++++.... ..|+|
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~-~~~lv 79 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVD-RLYFV 79 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCC-EEEEE
Confidence 478889999999999999999999999999998754321 123457888887764 67888988887754 89999
Q ss_pred EeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcc----------------
Q 040812 132 MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG---------------- 195 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~---------------- 195 (300)
|||+++|+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++...+.
T Consensus 80 ~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~ 159 (323)
T cd05615 80 MEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTR 159 (323)
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCcccc
Confidence 9999999999999888889999999999999999999999999999999999999987654322
Q ss_pred ---ceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHH
Q 040812 196 ---YSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDF 272 (300)
Q Consensus 196 ---~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 272 (300)
++..|.+||... +..++.++|||||||++|||+||+.||...... .....+. ......|...+.++.++
T Consensus 160 ~~~gt~~y~aPE~~~---~~~~~~~~DiwslGvil~elltG~~pf~~~~~~----~~~~~i~-~~~~~~p~~~~~~~~~l 231 (323)
T cd05615 160 TFCGTPDYIAPEIIA---YQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED----ELFQSIM-EHNVSYPKSLSKEAVSI 231 (323)
T ss_pred CccCCccccCHHHHc---CCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH----HHHHHHH-hCCCCCCccCCHHHHHH
Confidence 223355555443 455778999999999999999999999754332 2222222 33445677789999999
Q ss_pred HHHHhccCCCCCCCC-----HHHHhcCCCCCC
Q 040812 273 IRCCLQKGDPSKRWT-----ASQLLSHPFLAD 299 (300)
Q Consensus 273 i~~~l~~~dp~~Rpt-----~~~~l~hpw~~~ 299 (300)
+.+||.. ||++|++ .+++++||||+.
T Consensus 232 i~~~l~~-~p~~R~~~~~~~~~~i~~h~~f~~ 262 (323)
T cd05615 232 CKGLMTK-HPSKRLGCGPEGERDIREHAFFRR 262 (323)
T ss_pred HHHHccc-CHhhCCCCCCCCHHHHhcCcccCC
Confidence 9999999 9999997 579999999975
No 94
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.1e-43 Score=299.30 Aligned_cols=237 Identities=31% Similarity=0.474 Sum_probs=189.2
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC--CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
.++|++.+.||+|+||.||+|++..+++.||+|+++..... ....+|+.+++.++||||+++++.+.... ..|+|||
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~-~~~lv~e 86 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRD-KLWICME 86 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC-EEEEEEe
Confidence 45789999999999999999999999999999998754322 12357999999999999999999987754 8999999
Q ss_pred ccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcc------------------
Q 040812 134 YMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG------------------ 195 (300)
Q Consensus 134 ~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~------------------ 195 (300)
|+++++|.+++...+.+++..++.++.|++.||.|||+.|++|+||||+||+++.++...+.
T Consensus 87 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 166 (267)
T cd06645 87 FCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSF 166 (267)
T ss_pred ccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcccccccc
Confidence 99999999999888889999999999999999999999999999999999999876543221
Q ss_pred -ceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCC--CCCCChHHHHH
Q 040812 196 -YSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL--PECSSEKFRDF 272 (300)
Q Consensus 196 -~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~l 272 (300)
++..|.+||.......+.++.++|||||||++|+|++|..||............... ...++.. ...++..+.++
T Consensus 167 ~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l 244 (267)
T cd06645 167 IGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKS--NFQPPKLKDKMKWSNSFHHF 244 (267)
T ss_pred cCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhcc--CCCCCcccccCCCCHHHHHH
Confidence 123456666643333445677999999999999999999999654432221111111 1111111 12457889999
Q ss_pred HHHHhccCCCCCCCCHHHHhcCCC
Q 040812 273 IRCCLQKGDPSKRWTASQLLSHPF 296 (300)
Q Consensus 273 i~~~l~~~dp~~Rpt~~~~l~hpw 296 (300)
|.+||.. ||++||+++++++|||
T Consensus 245 i~~~l~~-~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 245 VKMALTK-NPKKRPTAEKLLQHPF 267 (267)
T ss_pred HHHHccC-CchhCcCHHHHhcCCC
Confidence 9999999 9999999999999999
No 95
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=2.8e-44 Score=312.44 Aligned_cols=227 Identities=28% Similarity=0.457 Sum_probs=184.8
Q ss_pred eeecCCcceEEEEEEEc---cCCeEEEEEEeecCCCC----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEecc
Q 040812 63 QVLGQGNGGTVFKVRHK---QTLALYALKVMQCDRGT----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYM 135 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~ 135 (300)
+.||+|+||.||++++. .+++.||+|++...... ....+|+.++++++||||+++++++..+. ..|+||||+
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~~ 80 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEG-KLYLILDFL 80 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCC-EEEEEEcCC
Confidence 67999999999999873 57899999999754321 12356999999999999999999988754 899999999
Q ss_pred CCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-------------------
Q 040812 136 DAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY------------------- 196 (300)
Q Consensus 136 ~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~------------------- 196 (300)
++|+|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.++...+.+
T Consensus 81 ~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 160 (318)
T cd05582 81 RGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCG 160 (318)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecccC
Confidence 9999999998877899999999999999999999999999999999999998776543322
Q ss_pred eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHH
Q 040812 197 SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276 (300)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 276 (300)
+..|.+||... +..++.++|||||||++|||+||+.||...... .....+. .....++...++.+.++|.+|
T Consensus 161 ~~~y~aPE~~~---~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~----~~~~~i~-~~~~~~p~~~~~~~~~li~~~ 232 (318)
T cd05582 161 TVEYMAPEVVN---RRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK----ETMTMIL-KAKLGMPQFLSPEAQSLLRAL 232 (318)
T ss_pred ChhhcCHHHHc---CCCCCCccceeccceEeeeeccCCCCCCCCCHH----HHHHHHH-cCCCCCCCCCCHHHHHHHHHH
Confidence 22344455433 345677999999999999999999999654322 2222222 334456777899999999999
Q ss_pred hccCCCCCCCC-----HHHHhcCCCCCC
Q 040812 277 LQKGDPSKRWT-----ASQLLSHPFLAD 299 (300)
Q Consensus 277 l~~~dp~~Rpt-----~~~~l~hpw~~~ 299 (300)
|+. ||++||+ ++++++||||..
T Consensus 233 l~~-~P~~R~~a~~~~~~~~~~~~~~~~ 259 (318)
T cd05582 233 FKR-NPANRLGAGPDGVEEIKRHPFFST 259 (318)
T ss_pred hhc-CHhHcCCCCCCCHHHHhCCCCcCC
Confidence 999 9999999 778999999975
No 96
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=7.2e-43 Score=301.28 Aligned_cols=240 Identities=25% Similarity=0.368 Sum_probs=186.6
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEE
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv 131 (300)
.+++|++.+.||+|+||.||+|++..+++.||+|.++..... ....+|+.++++++|+||+++++++..+. ..|+|
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~-~~~lv 82 (301)
T cd07873 4 KLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEK-SLTLV 82 (301)
T ss_pred cccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCC-eEEEE
Confidence 467899999999999999999999999999999998754322 23467999999999999999999998764 89999
Q ss_pred EeccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce-------------
Q 040812 132 MEYMDAGSLEIYVKSR-GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS------------- 197 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~------------- 197 (300)
|||+.+ +|.+++... ..+++..++.++.||+.||.|||+.|++|+||||+||+++.++...++++
T Consensus 83 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 161 (301)
T cd07873 83 FEYLDK-DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY 161 (301)
T ss_pred Eecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcc
Confidence 999975 888888753 46899999999999999999999999999999999999998765433222
Q ss_pred ------eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhh-----------C----
Q 040812 198 ------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICF-----------R---- 256 (300)
Q Consensus 198 ------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~-----------~---- 256 (300)
..|.+||.... ...++.++|||||||++|||+||++||...+.......+...... .
T Consensus 162 ~~~~~~~~y~~PE~~~~--~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (301)
T cd07873 162 SNEVVTLWYRPPDILLG--STDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFK 239 (301)
T ss_pred cccceeecccCcHHHhC--CCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcccccc
Confidence 22444554321 234667999999999999999999999754432211111110000 0
Q ss_pred --CCC--------CCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 257 --EPP--------SLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 257 --~~~--------~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
..+ .....+++.++++|.+||.. ||.+|||++|+++||||+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~-dp~~R~t~~eil~h~~f~~ 291 (301)
T cd07873 240 SYNYPKYRADCLHNHAPRLDSDGAELLSKLLQF-EGRKRISAEEAMKHPYFHC 291 (301)
T ss_pred ccccCccccccHHhhcCCCCHHHHHHHHHHhcC-CcccCcCHHHHhcCccccc
Confidence 000 01124678899999999999 9999999999999999974
No 97
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.2e-43 Score=298.21 Aligned_cols=241 Identities=28% Similarity=0.391 Sum_probs=188.5
Q ss_pred CCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC--CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEE
Q 040812 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 54 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv 131 (300)
...++|++.+.||+|+||.||+|++..+++.||+|++...... ....+|+.++++++|+||+++++++.... ..|+|
T Consensus 6 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~-~~~iv 84 (267)
T cd06646 6 NPQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSRE-KLWIC 84 (267)
T ss_pred CchhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC-EEEEE
Confidence 3456799999999999999999999999999999998654322 12357999999999999999999988754 89999
Q ss_pred EeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc---------------
Q 040812 132 MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY--------------- 196 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~--------------- 196 (300)
|||+++++|.+++...+.+++..+..++.|++.||.|||+.||+||||||+||+++.++...+.+
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~ 164 (267)
T cd06646 85 MEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRK 164 (267)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecccccccC
Confidence 99999999999998777899999999999999999999999999999999999998775432221
Q ss_pred ----eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHH
Q 040812 197 ----SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDF 272 (300)
Q Consensus 197 ----~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 272 (300)
...|.+||.........++.++|||||||++|||++|..||...........................++..+.+|
T Consensus 165 ~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 244 (267)
T cd06646 165 SFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNF 244 (267)
T ss_pred ccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHH
Confidence 1235555554322234456789999999999999999999965432211111111100011111123467899999
Q ss_pred HHHHhccCCCCCCCCHHHHhcCCC
Q 040812 273 IRCCLQKGDPSKRWTASQLLSHPF 296 (300)
Q Consensus 273 i~~~l~~~dp~~Rpt~~~~l~hpw 296 (300)
|.+||.. ||++|||++++++|+|
T Consensus 245 i~~~l~~-~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 245 VKISLTK-NPKKRPTAERLLTHLF 267 (267)
T ss_pred HHHHhhC-ChhhCcCHHHHhcCCC
Confidence 9999999 9999999999999998
No 98
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=2.4e-43 Score=313.01 Aligned_cols=238 Identities=27% Similarity=0.347 Sum_probs=184.3
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC----CCCHHHHHHHHhcCCCceeEeceeeeCCC----CcEE
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT----PPNPQELNILRQTNSPYIVKCHQIFTKPS----GEVS 129 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~~ 129 (300)
+|++.+.||+|+||.||++.+..+++.||+|.+...... ....+|+.+++.++|+||+++++++.... ...|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 478899999999999999999999999999988643221 23467999999999999999999987543 2689
Q ss_pred EEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcccee-----------
Q 040812 130 ILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSC----------- 198 (300)
Q Consensus 130 lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~----------- 198 (300)
+||||+.+ +|.+++.....+++..++.++.||+.||.|||++|++||||||+|||++.++...+.+++
T Consensus 81 lv~e~~~~-~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~ 159 (372)
T cd07853 81 VVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESK 159 (372)
T ss_pred EEeecccc-CHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCccc
Confidence 99999974 888888877789999999999999999999999999999999999999987654333222
Q ss_pred ---------eccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHH-----------------
Q 040812 199 ---------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLA----------------- 252 (300)
Q Consensus 199 ---------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~----------------- 252 (300)
.|.+||.... ...++.++|||||||++|||++|+.||...........+...
T Consensus 160 ~~~~~~~~~~y~aPE~~~~--~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 237 (372)
T cd07853 160 HMTQEVVTQYYRAPEILMG--SRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGAR 237 (372)
T ss_pred cCCCCCcCCCcCCHHHHcC--CCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHH
Confidence 2344443321 134677999999999999999999999654432211111100
Q ss_pred -HhhCC---CC------CCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 253 -ICFRE---PP------SLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 253 -~~~~~---~~------~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
..... ++ ......++++.+||.+||.. ||++|||+.++++||||++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~-dP~~R~t~~e~l~hp~~~~ 293 (372)
T cd07853 238 AHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVF-DPDKRISAADALAHPYLDE 293 (372)
T ss_pred HHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCC-ChhhCcCHHHHhcCHhhCC
Confidence 00000 11 12234578899999999999 9999999999999999975
No 99
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=5.5e-43 Score=296.79 Aligned_cols=236 Identities=27% Similarity=0.452 Sum_probs=190.5
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC--------CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEE
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--------PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVS 129 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--------~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 129 (300)
+|+..+.||+|+||.||++.+..+++.||+|++...... ..+.+|+.++++++|+||+++++++.... ..+
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~ 79 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDS-HFN 79 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCC-eEE
Confidence 478889999999999999999999999999998754321 23356999999999999999999987654 899
Q ss_pred EEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCC-C---Cccc---------
Q 040812 130 ILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKME-H---PCGY--------- 196 (300)
Q Consensus 130 lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~-~---~~~~--------- 196 (300)
+||||+++++|.+++...+.+++..+..++.|++.||.|||++|++|+||||+||+++.++. . ++|.
T Consensus 80 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~ 159 (268)
T cd06630 80 LFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGT 159 (268)
T ss_pred EEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccccccccc
Confidence 99999999999999988778999999999999999999999999999999999999976542 1 1111
Q ss_pred -----------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCC
Q 040812 197 -----------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265 (300)
Q Consensus 197 -----------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (300)
+..|.+||... +..++.++|||||||++|+|++|..||.....................+..+...
T Consensus 160 ~~~~~~~~~~~~~~~~~PE~~~---~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (268)
T cd06630 160 GAGEFQGQLLGTIAFMAPEVLR---GEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHL 236 (268)
T ss_pred cCCccccccccccceeCHhHhc---cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhh
Confidence 12344554432 3456779999999999999999999996543322222222222223455667778
Q ss_pred ChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCC
Q 040812 266 SEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLA 298 (300)
Q Consensus 266 ~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~ 298 (300)
++++.+++.+||.. ||++||++.++++||||+
T Consensus 237 ~~~~~~~i~~~l~~-~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 237 SPGLRDVTLRCLEL-QPEDRPPSRELLKHPVFR 268 (268)
T ss_pred CHHHHHHHHHHcCC-CcccCcCHHHHhcCcccC
Confidence 89999999999999 999999999999999995
No 100
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.3e-42 Score=294.41 Aligned_cols=231 Identities=29% Similarity=0.446 Sum_probs=189.9
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC-----------CCHHHHHHHHhcCCCceeEeceeeeCCCC
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP-----------PNPQELNILRQTNSPYIVKCHQIFTKPSG 126 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----------~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 126 (300)
+|.+.+.||+|+||.||+|.+..+++.+|+|.+....... .+.+|+.++++++||||+++++++....
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~- 79 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDAD- 79 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC-
Confidence 4677889999999999999999889999999886543322 2356899999999999999999987754
Q ss_pred cEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce---------
Q 040812 127 EVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS--------- 197 (300)
Q Consensus 127 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~--------- 197 (300)
..++||||+++++|.+++...+.+++..+..++.|++.||.|||+.|++||||+|+||+++.++...+.++
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06628 80 HLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEAN 159 (267)
T ss_pred ccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCcccccc
Confidence 89999999999999999988778999999999999999999999999999999999999987765433222
Q ss_pred ----------------eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCC
Q 040812 198 ----------------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL 261 (300)
Q Consensus 198 ----------------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 261 (300)
..|.+||... +..++.++|+|||||++|+|+||..||...... ..+........+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~~pe~~~---~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~~ 232 (267)
T cd06628 160 SLSTKTNGARPSLQGSVFWMAPEVVK---QTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL----QAIFKIGENASPEI 232 (267)
T ss_pred cccCCccccccccCCCcCccChhHhc---cCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH----HHHHHHhccCCCcC
Confidence 1233444332 345667899999999999999999999754332 22223333445566
Q ss_pred CCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 262 PECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 262 ~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
+...+..+.++|.+||+. ||++||++.++++||||
T Consensus 233 ~~~~~~~~~~li~~~l~~-~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 233 PSNISSEAIDFLEKTFEI-DHNKRPTAAELLKHPFL 267 (267)
T ss_pred CcccCHHHHHHHHHHccC-CchhCcCHHHHhhCCCC
Confidence 777899999999999999 99999999999999998
No 101
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.3e-44 Score=288.12 Aligned_cols=241 Identities=32% Similarity=0.478 Sum_probs=194.6
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCC----------CHHHHHHHHhc-CCCceeEeceeeeC
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPP----------NPQELNILRQT-NSPYIVKCHQIFTK 123 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~----------~~~E~~~l~~l-~h~niv~~~~~~~~ 123 (300)
....|+--+.||.|..+.|-++..+.++..+|+|++........ ..+|+.+|+++ .||+|+.+.++|+.
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes 94 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES 94 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence 45667888999999999999999999999999999864332211 14589999997 69999999999998
Q ss_pred CCCcEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCC---ccc----
Q 040812 124 PSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHP---CGY---- 196 (300)
Q Consensus 124 ~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~---~~~---- 196 (300)
+. .+++|+|.|+.|.|.+++...-.++++..+.|++|++.|+.|||..+|+||||||+|||++++.+.. +|+
T Consensus 95 ~s-F~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l 173 (411)
T KOG0599|consen 95 DA-FVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQL 173 (411)
T ss_pred cc-hhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeecc
Confidence 75 8999999999999999999988899999999999999999999999999999999999999987653 333
Q ss_pred -----------eeecccccccccc---CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCC
Q 040812 197 -----------SCLYESGEARHRK---HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLP 262 (300)
Q Consensus 197 -----------~~~~~~~~~~~~~---~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (300)
+..|.+||..... ....|+..+|+||.|||||.|+.|.+||....+. -++..+..-........+
T Consensus 174 ~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQm-lMLR~ImeGkyqF~speW 252 (411)
T KOG0599|consen 174 EPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQM-LMLRMIMEGKYQFRSPEW 252 (411)
T ss_pred CCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHH-HHHHHHHhcccccCCcch
Confidence 3345555544321 2334677999999999999999999999753221 111222222222333446
Q ss_pred CCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCC
Q 040812 263 ECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLA 298 (300)
Q Consensus 263 ~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~ 298 (300)
.+.++..+|||.+||+. ||.+|.|++|+|.||||.
T Consensus 253 adis~~~KdLIsrlLqV-dp~~Ritake~LaHpff~ 287 (411)
T KOG0599|consen 253 ADISATVKDLISRLLQV-DPTKRITAKEALAHPFFI 287 (411)
T ss_pred hhccccHHHHHHHHHee-CchhcccHHHHhcChHHH
Confidence 77899999999999999 999999999999999994
No 102
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.2e-43 Score=306.89 Aligned_cols=235 Identities=29% Similarity=0.435 Sum_probs=202.7
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCC----CHHHHHHHHhcCCCceeEeceeeeCCCCcEEEE
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPP----NPQELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~----~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv 131 (300)
.++|+.++.+|+|+||.+++++.+...+.+++|.+........ ..+|+.++++++|||||.+.+.|..++..+|||
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 5789999999999999999999999999999999976554433 357999999999999999999999876559999
Q ss_pred EeccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-------------
Q 040812 132 MEYMDAGSLEIYVKSR--GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY------------- 196 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~------------- 196 (300)
|+||+||+|.+.+... ..|+++.+..++.||+.|+.|||+++|+|||||+.|||++.+.....|+
T Consensus 83 m~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~ 162 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSL 162 (426)
T ss_pred EeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCchhh
Confidence 9999999999999753 4699999999999999999999999999999999999999876654443
Q ss_pred ------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHH
Q 040812 197 ------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFR 270 (300)
Q Consensus 197 ------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (300)
+..|..||... +..|+.|+|||||||++|||++-+++|... ++...+..+....-..+|...+.+++
T Consensus 163 a~tvvGTp~YmcPEil~---d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~----~m~~Li~ki~~~~~~Plp~~ys~el~ 235 (426)
T KOG0589|consen 163 ASTVVGTPYYMCPEILS---DIPYNEKSDIWSLGCCLYEMCTLKPAFKAS----NMSELILKINRGLYSPLPSMYSSELR 235 (426)
T ss_pred hheecCCCcccCHHHhC---CCCCCccCcchhhcchHHHHHhcccccCcc----chHHHHHHHhhccCCCCCccccHHHH
Confidence 44455555544 677899999999999999999999999653 44455666665666788889999999
Q ss_pred HHHHHHhccCCCCCCCCHHHHhcCCCCC
Q 040812 271 DFIRCCLQKGDPSKRWTASQLLSHPFLA 298 (300)
Q Consensus 271 ~li~~~l~~~dp~~Rpt~~~~l~hpw~~ 298 (300)
.+|..||.. +|+.||++.++|.+|.+.
T Consensus 236 ~lv~~~l~~-~P~~RPsa~~LL~~P~l~ 262 (426)
T KOG0589|consen 236 SLVKSMLRK-NPEHRPSALELLRRPHLL 262 (426)
T ss_pred HHHHHHhhc-CCccCCCHHHHhhChhhh
Confidence 999999999 999999999999998764
No 103
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=2e-43 Score=308.84 Aligned_cols=242 Identities=25% Similarity=0.337 Sum_probs=187.2
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCC-----CCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG-----TPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv 131 (300)
++|++.+.||+|+||.||+++++.+++.+|+|++..... ...+.+|+.++..++|+||+++++++.... ..|+|
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-~~~lv 79 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDEN-NLYLV 79 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCC-EEEEE
Confidence 468999999999999999999999999999999864221 112456888999999999999999988765 89999
Q ss_pred EeccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcc---------------
Q 040812 132 MEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG--------------- 195 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~--------------- 195 (300)
|||+++|+|.+++.. ...+++..++.++.||+.||.|||+.||+||||||+|||++.++...+.
T Consensus 80 ~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~ 159 (332)
T cd05623 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ 159 (332)
T ss_pred EeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCcce
Confidence 999999999999976 4578999999999999999999999999999999999999876543222
Q ss_pred -----ceeecccccccccc--CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChH
Q 040812 196 -----YSCLYESGEARHRK--HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEK 268 (300)
Q Consensus 196 -----~~~~~~~~~~~~~~--~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (300)
++..|.+||..... ....++.++|||||||++|||++|+.||...........+.........+.....++++
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~ 239 (332)
T cd05623 160 SSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSED 239 (332)
T ss_pred ecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHH
Confidence 23346666654321 12346779999999999999999999997543322222221110001112223457899
Q ss_pred HHHHHHHHhccCCCCC--CCCHHHHhcCCCCCCC
Q 040812 269 FRDFIRCCLQKGDPSK--RWTASQLLSHPFLADA 300 (300)
Q Consensus 269 l~~li~~~l~~~dp~~--Rpt~~~~l~hpw~~~~ 300 (300)
++++|.+||.. ++++ |++++++++||||.++
T Consensus 240 ~~~li~~ll~~-~~~r~~r~~~~~~~~h~~f~~~ 272 (332)
T cd05623 240 AKDLIRRLICS-REHRLGQNGIEDFKQHPFFTGI 272 (332)
T ss_pred HHHHHHHHccC-hhhhcCCCCHHHHhCCCCcCCC
Confidence 99999999965 5444 7899999999999763
No 104
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.2e-42 Score=317.84 Aligned_cols=236 Identities=27% Similarity=0.355 Sum_probs=192.2
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC----CCHHHHHHHHhcCCCceeEeceeeeCCC-----
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP----PNPQELNILRQTNSPYIVKCHQIFTKPS----- 125 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~E~~~l~~l~h~niv~~~~~~~~~~----- 125 (300)
..++|++.+.||+|+||.||+|++..+++.||+|++....... .+.+|+..+..++|+||+++++.+....
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence 4578999999999999999999999999999999987654322 2356899999999999999888764321
Q ss_pred --CcEEEEEeccCCCCHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc---
Q 040812 126 --GEVSILMEYMDAGSLEIYVKSR----GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY--- 196 (300)
Q Consensus 126 --~~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~--- 196 (300)
..+++||||+++|+|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++...+++
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGl 189 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGF 189 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEeccc
Confidence 1378999999999999998652 3689999999999999999999999999999999999999876543322
Q ss_pred ------------------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCC
Q 040812 197 ------------------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREP 258 (300)
Q Consensus 197 ------------------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 258 (300)
+..|.+||... +..++.++|||||||++|||++|+.||.... ....+........
T Consensus 190 s~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~---~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~----~~~~~~~~~~~~~ 262 (496)
T PTZ00283 190 SKMYAATVSDDVGRTFCGTPYYVAPEIWR---RKPYSKKADMFSLGVLLYELLTLKRPFDGEN----MEEVMHKTLAGRY 262 (496)
T ss_pred CeeccccccccccccccCCcceeCHHHhC---CCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC----HHHHHHHHhcCCC
Confidence 22355565543 4567889999999999999999999996532 2233444444445
Q ss_pred CCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCC
Q 040812 259 PSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLA 298 (300)
Q Consensus 259 ~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~ 298 (300)
..++..+++++.+++.+||.. ||++||++.++++|||++
T Consensus 263 ~~~~~~~~~~l~~li~~~L~~-dP~~RPs~~ell~~p~~~ 301 (496)
T PTZ00283 263 DPLPPSISPEMQEIVTALLSS-DPKRRPSSSKLLNMPICK 301 (496)
T ss_pred CCCCCCCCHHHHHHHHHHccc-ChhhCcCHHHHHhCHHHH
Confidence 556778899999999999999 999999999999999975
No 105
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1.3e-42 Score=300.72 Aligned_cols=237 Identities=38% Similarity=0.635 Sum_probs=188.4
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
++|++.+.||+|+||.||++.+..++..+|+|.++.+... ..+.+|+.++++++||||+++++++..+. ..|+|||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~e 79 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDG-EISICME 79 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC-EEEEEee
Confidence 3689999999999999999999999999999998754321 22457999999999999999999988754 8999999
Q ss_pred ccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCceeecCCCCCCccc----------------
Q 040812 134 YMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHS-RNIVHRDIKPANVLINEKMEHPCGY---------------- 196 (300)
Q Consensus 134 ~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~-~~i~H~Dlkp~Nill~~~~~~~~~~---------------- 196 (300)
|+++++|.+++...+.+++..+..++.|++.||.|||+ .+++|+||||+|||++.++...+.+
T Consensus 80 y~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (308)
T cd06615 80 HMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV 159 (308)
T ss_pred ccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccccccccCC
Confidence 99999999999888889999999999999999999997 5999999999999998875443322
Q ss_pred -eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHH--------------------------
Q 040812 197 -SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSL-------------------------- 249 (300)
Q Consensus 197 -~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~-------------------------- 249 (300)
...|.+||... +..++.++|||||||++|+|+||+.||...+.. .....
T Consensus 160 ~~~~~~aPE~~~---~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (308)
T cd06615 160 GTRSYMSPERLQ---GTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAK-ELEAMFGRPVSEGEAKESHRPVSGHPPDSPR 235 (308)
T ss_pred CCcCccChhHhc---CCCCCccchHHHHHHHHHHHHhCCCCCCCcchh-hHHHhhcCccccccccCCcccccCCCCCccc
Confidence 22345555432 455778999999999999999999999543211 11111
Q ss_pred -------HHHHhhCCCCCCCC-CCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 250 -------MLAICFREPPSLPE-CSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 250 -------~~~~~~~~~~~~~~-~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
........++..+. ..+.+++++|.+||.. ||++|||+.++++||||.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~-~P~~Rpt~~~ll~~~~~~~ 292 (308)
T cd06615 236 PMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKK-NPKERADLKELTKHPFIKR 292 (308)
T ss_pred hhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccC-ChhhCcCHHHHhcChhhhh
Confidence 11111112222222 3677899999999999 9999999999999999975
No 106
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.3e-42 Score=297.48 Aligned_cols=237 Identities=22% Similarity=0.346 Sum_probs=190.2
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEE
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILM 132 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~ 132 (300)
+|+..+.||+|+||.||++.+..+++.+|+|.+...... ....+|+.++++++|+||+.+++.+.... ..|+||
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~-~~~lv~ 79 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKD-ALCLVL 79 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCC-EEEEEE
Confidence 477889999999999999999999999999998654322 12357999999999999999999887754 899999
Q ss_pred eccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc--------------
Q 040812 133 EYMDAGSLEIYVKSR--GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY-------------- 196 (300)
Q Consensus 133 e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~-------------- 196 (300)
||+++++|.+++... ..+++..+..++.|++.||.|||+.||+||||||+||+++.++...+.+
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 159 (285)
T cd05632 80 TIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIR 159 (285)
T ss_pred EeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCccc
Confidence 999999999888653 3699999999999999999999999999999999999998765433222
Q ss_pred ----eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHH
Q 040812 197 ----SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDF 272 (300)
Q Consensus 197 ----~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 272 (300)
+..|.+||... +..++.++|+|||||++|+|+||..||......... ..+...........+...+..+.++
T Consensus 160 ~~~g~~~~~aPE~~~---~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l 235 (285)
T cd05632 160 GRVGTVGYMAPEVLN---NQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKR-EEVDRRVLETEEVYSAKFSEEAKSI 235 (285)
T ss_pred CCCCCcCccChHHhc---CCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHHhhhccccccCccCCHHHHHH
Confidence 22344555442 455778999999999999999999999754332222 2222222233345566788899999
Q ss_pred HHHHhccCCCCCCCC-----HHHHhcCCCCCCC
Q 040812 273 IRCCLQKGDPSKRWT-----ASQLLSHPFLADA 300 (300)
Q Consensus 273 i~~~l~~~dp~~Rpt-----~~~~l~hpw~~~~ 300 (300)
+.+||+. ||++||+ +.++++|+||++.
T Consensus 236 i~~~l~~-~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05632 236 CKMLLTK-DPKQRLGCQEEGAGEVKRHPFFRNM 267 (285)
T ss_pred HHHHccC-CHhHcCCCcccChHHHHcChhhhcC
Confidence 9999999 9999999 8899999999763
No 107
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=2.9e-43 Score=311.88 Aligned_cols=239 Identities=26% Similarity=0.364 Sum_probs=189.4
Q ss_pred CCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcE
Q 040812 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEV 128 (300)
Q Consensus 54 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 128 (300)
...++|++.+.||+|+||.||+|+++.+++.||+|++...... ..+.+|+.+++.++||||+++++++.... ..
T Consensus 40 ~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~-~~ 118 (371)
T cd05622 40 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR-YL 118 (371)
T ss_pred cchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC-EE
Confidence 3457899999999999999999999999999999998642211 12356899999999999999999988754 89
Q ss_pred EEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcc-------------
Q 040812 129 SILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG------------- 195 (300)
Q Consensus 129 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~------------- 195 (300)
|+||||+++|+|.+++... .+++..++.++.||+.||.|||++||+||||||+|||++.++...+.
T Consensus 119 ~lv~Ey~~gg~L~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~ 197 (371)
T cd05622 119 YMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 197 (371)
T ss_pred EEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCc
Confidence 9999999999999998754 58999999999999999999999999999999999999877543221
Q ss_pred -------ceeeccccccccccC-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhC-CCCCCC--CC
Q 040812 196 -------YSCLYESGEARHRKH-GGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFR-EPPSLP--EC 264 (300)
Q Consensus 196 -------~~~~~~~~~~~~~~~-~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~--~~ 264 (300)
++..|.+||...... ...++.++|||||||++|||++|+.||...+.... ...+... ....++ ..
T Consensus 198 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~~~ 273 (371)
T cd05622 198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT----YSKIMNHKNSLTFPDDND 273 (371)
T ss_pred ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHH----HHHHHcCCCcccCCCcCC
Confidence 234466777654322 23467899999999999999999999975433222 2222211 122233 35
Q ss_pred CChHHHHHHHHHhccCCCCC--CCCHHHHhcCCCCCC
Q 040812 265 SSEKFRDFIRCCLQKGDPSK--RWTASQLLSHPFLAD 299 (300)
Q Consensus 265 ~~~~l~~li~~~l~~~dp~~--Rpt~~~~l~hpw~~~ 299 (300)
++..++++|.+||.. ++.+ |++++++++||||++
T Consensus 274 ~s~~~~~li~~~L~~-~~~r~~r~~~~ei~~h~~~~~ 309 (371)
T cd05622 274 ISKEAKNLICAFLTD-REVRLGRNGVEEIKRHLFFKN 309 (371)
T ss_pred CCHHHHHHHHHHcCC-hhhhcCCCCHHHHhcCcccCC
Confidence 789999999999975 5544 889999999999975
No 108
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=5.3e-42 Score=288.99 Aligned_cols=232 Identities=25% Similarity=0.393 Sum_probs=188.7
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC----CCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP----PNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
+|++.+.||+|+||.||++.++.+++.||+|.+....... .+.+|+.++++++|+|++++++.+....+..|+|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4899999999999999999999999999999987543322 245699999999999999999987655557899999
Q ss_pred ccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc---------------
Q 040812 134 YMDAGSLEIYVKSR--GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY--------------- 196 (300)
Q Consensus 134 ~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~--------------- 196 (300)
|+++++|.+++... ..+++..+..++.|++.||.+||+.|++|+||||+||+++.++...+.+
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 160 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMAS 160 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccCCccc
Confidence 99999999999763 3589999999999999999999999999999999999998765432221
Q ss_pred ----eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHH
Q 040812 197 ----SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDF 272 (300)
Q Consensus 197 ----~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 272 (300)
...|.+||... +..++.++|||||||++|+|++|+.||...+. ............+..+...++.+.++
T Consensus 161 ~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l 233 (257)
T cd08223 161 TLIGTPYYMSPELFS---NKPYNYKSDVWALGCCVYEMATLKHAFNAKDM----NSLVYRIIEGKLPPMPKDYSPELGEL 233 (257)
T ss_pred cccCCcCccChhHhc---CCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH----HHHHHHHHhcCCCCCccccCHHHHHH
Confidence 22345555433 45567799999999999999999999964332 12222233344445667788999999
Q ss_pred HHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 273 IRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 273 i~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
+.+||.. ||++||++.++++||||
T Consensus 234 i~~~l~~-~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 234 IATMLSK-RPEKRPSVKSILRQPYI 257 (257)
T ss_pred HHHHhcc-CcccCCCHHHHhcCCCC
Confidence 9999999 99999999999999998
No 109
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1.6e-42 Score=295.09 Aligned_cols=234 Identities=35% Similarity=0.519 Sum_probs=192.4
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC---CCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP---PNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
++|++.+.||.|+||.||+|++..+++.||+|.+....... .+.+|+.+++.++|+||+++++++..+. ..|+|+|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~~v~e 79 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGS-KLWIIME 79 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECC-eEEEEEE
Confidence 46899999999999999999999999999999987543221 2467999999999999999999988764 8999999
Q ss_pred ccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce----------------
Q 040812 134 YMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS---------------- 197 (300)
Q Consensus 134 ~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~---------------- 197 (300)
|+++++|.+++... .+++..+..++.|++.||.|||+++++|+||+|+||++++++...++.+
T Consensus 80 ~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~ 158 (274)
T cd06609 80 YCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTF 158 (274)
T ss_pred eeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccccccccc
Confidence 99999999999865 7899999999999999999999999999999999999998765432221
Q ss_pred ---eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCC-CChHHHHHH
Q 040812 198 ---CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPEC-SSEKFRDFI 273 (300)
Q Consensus 198 ---~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li 273 (300)
..|.+||... +..++.++|||||||++|+|+||..||...... .....+.....+..+.. .++.+.+++
T Consensus 159 ~~~~~y~~PE~~~---~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l 231 (274)
T cd06609 159 VGTPFWMAPEVIK---QSGYDEKADIWSLGITAIELAKGEPPLSDLHPM----RVLFLIPKNNPPSLEGNKFSKPFKDFV 231 (274)
T ss_pred cCCccccChhhhc---cCCCCchhhHHHHHHHHHHHHhCCCCcccCchH----HHHHHhhhcCCCCCcccccCHHHHHHH
Confidence 1244555443 444778999999999999999999999654322 22223333444555555 788999999
Q ss_pred HHHhccCCCCCCCCHHHHhcCCCCCCC
Q 040812 274 RCCLQKGDPSKRWTASQLLSHPFLADA 300 (300)
Q Consensus 274 ~~~l~~~dp~~Rpt~~~~l~hpw~~~~ 300 (300)
.+||.. ||++|||++++++||||.++
T Consensus 232 ~~~l~~-~p~~Rpt~~~il~~~~~~~~ 257 (274)
T cd06609 232 SLCLNK-DPKERPSAKELLKHKFIKKA 257 (274)
T ss_pred HHHhhC-ChhhCcCHHHHhhChhhcCC
Confidence 999999 99999999999999999763
No 110
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.5e-42 Score=304.70 Aligned_cols=234 Identities=22% Similarity=0.313 Sum_probs=179.9
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEecc
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYM 135 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~ 135 (300)
..+|++++.||+|+||.||+|.+..+++.||+|+... .....|+.++++++|+||+++++++.... ..|+|||++
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~e~~ 139 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK----GTTLIEAMLLQNVNHPSVIRMKDTLVSGA-ITCMVLPHY 139 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc----cccHHHHHHHHhCCCCCCcChhheEEeCC-eeEEEEEcc
Confidence 3469999999999999999999999999999997532 23467999999999999999999988754 899999999
Q ss_pred CCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcc------------------c
Q 040812 136 DAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG------------------Y 196 (300)
Q Consensus 136 ~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~------------------~ 196 (300)
.+ +|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++...+. +
T Consensus 140 ~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~g 218 (357)
T PHA03209 140 SS-DLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLAG 218 (357)
T ss_pred CC-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccCcccccccc
Confidence 65 88887764 4569999999999999999999999999999999999999876543222 2
Q ss_pred eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCc-h---------HHHHHHHHhhCCCCCCC----
Q 040812 197 SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEP-D---------FLSLMLAICFREPPSLP---- 262 (300)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~-~---------~~~~~~~~~~~~~~~~~---- 262 (300)
+..|.+||... +..++.++|||||||++|||+++..|+....... . ....+... ...+..++
T Consensus 219 t~~y~aPE~~~---~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~ 294 (357)
T PHA03209 219 TVETNAPEVLA---RDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTL-KVHPEEFPRDPG 294 (357)
T ss_pred cccccCCeecC---CCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHh-ccChhhcCCCCc
Confidence 23455666543 4567889999999999999998655553322111 0 00111100 00011111
Q ss_pred --------------------------CCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCCC
Q 040812 263 --------------------------ECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300 (300)
Q Consensus 263 --------------------------~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~~ 300 (300)
...+.++.++|.+||+. ||++|||+.|+++||||++.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~-dP~~Rpta~e~l~hp~f~~~ 357 (357)
T PHA03209 295 SRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTF-DAAMRPSAEEILNYPMFAQL 357 (357)
T ss_pred cHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcC-CcccCcCHHHHhcCchhccC
Confidence 13456778899999999 99999999999999999863
No 111
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.2e-42 Score=307.65 Aligned_cols=238 Identities=24% Similarity=0.328 Sum_probs=183.0
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC----CCCHHHHHHHHhcCCCceeEeceeeeCCC-----
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT----PPNPQELNILRQTNSPYIVKCHQIFTKPS----- 125 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~----- 125 (300)
-.++|++.+.||+|+||.||+|.+..+++.||||.+...... ....+|+.+++.++||||+++++++....
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 467899999999999999999999999999999998653322 22357999999999999999999875432
Q ss_pred CcEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc---------
Q 040812 126 GEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY--------- 196 (300)
Q Consensus 126 ~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~--------- 196 (300)
...|+||||+++ +|.+.+.. .+++..+..++.|++.||.|||++||+||||||+|||++.++...+.+
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 178 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 178 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCC
Confidence 257999999976 77777753 488999999999999999999999999999999999999875543322
Q ss_pred ---------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHh-------------
Q 040812 197 ---------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAIC------------- 254 (300)
Q Consensus 197 ---------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~------------- 254 (300)
+..|.+||... +..++.++|||||||++|+|+||+.||...+....+..++....
T Consensus 179 ~~~~~~~~~t~~y~aPE~~~---~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (364)
T cd07875 179 SFMMTPYVVTRYYRAPEVIL---GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPT 255 (364)
T ss_pred CCcccCCcccCCcCCHHHHh---CCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHH
Confidence 23355555543 45677899999999999999999999975443222222211100
Q ss_pred -----hCCC-------------------CCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 255 -----FREP-------------------PSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 255 -----~~~~-------------------~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
...+ .......++.+++||.+||+. ||++|||+.++++||||..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~-dP~~R~t~~e~L~hp~~~~ 323 (364)
T cd07875 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVI-DASKRISVDEALQHPYINV 323 (364)
T ss_pred HHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCc-CcccCCCHHHHhcCccccc
Confidence 0000 001112346789999999999 9999999999999999963
No 112
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=7.5e-43 Score=298.93 Aligned_cols=240 Identities=35% Similarity=0.558 Sum_probs=193.5
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
++|++++.||+|+||.||++.+..+++.||+|.++..... ..+.+|+.++++++|+||+++++.+.... ..|+|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-~~~lv~e 79 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEG-AVYMCME 79 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCC-eEEEEEe
Confidence 4689999999999999999999999999999988653221 23467999999999999999999988754 8999999
Q ss_pred ccCCCCHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCceeecCCCCCCccce------------
Q 040812 134 YMDAGSLEIYVKSR---GRLSEDIICTISRQVLKGLFYMHS-RNIVHRDIKPANVLINEKMEHPCGYS------------ 197 (300)
Q Consensus 134 ~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~~l~~lH~-~~i~H~Dlkp~Nill~~~~~~~~~~~------------ 197 (300)
|+++++|..++... ..+++..+..++.||+.||.|||+ .|++|+||||+||+++.++...++++
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 159 (286)
T cd06622 80 YMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAK 159 (286)
T ss_pred ecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCccc
Confidence 99999999988763 368999999999999999999996 59999999999999998765433322
Q ss_pred -----eecccccccccc---CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHH
Q 040812 198 -----CLYESGEARHRK---HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269 (300)
Q Consensus 198 -----~~~~~~~~~~~~---~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 269 (300)
..|.+||..... ....++.++|||||||++|+|+||+.||..... .........+.....+..+..+++++
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd06622 160 TNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETY-ANIFAQLSAIVDGDPPTLPSGYSDDA 238 (286)
T ss_pred cCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcch-hhHHHHHHHHhhcCCCCCCcccCHHH
Confidence 234555543211 112346799999999999999999999965432 22223333344455666777789999
Q ss_pred HHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 270 RDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 270 ~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
.++|.+||.. +|++||+++++++||||..
T Consensus 239 ~~li~~~l~~-~p~~Rp~~~~l~~~~~~~~ 267 (286)
T cd06622 239 QDFVAKCLNK-IPNRRPTYAQLLEHPWLVK 267 (286)
T ss_pred HHHHHHHccc-CcccCCCHHHHhcChhhhh
Confidence 9999999999 9999999999999999954
No 113
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=2.4e-42 Score=295.41 Aligned_cols=235 Identities=28% Similarity=0.461 Sum_probs=183.0
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
+|++.+.||+|+||.||+|.+..+|+.||+|.++..... ....+|+.++++++|+||+++++++.+.. ..|+|+|
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e 79 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDK-KLTLVFE 79 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCC-ceEEEEe
Confidence 588999999999999999999999999999998754322 23467999999999999999999988754 8999999
Q ss_pred ccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc----------------
Q 040812 134 YMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY---------------- 196 (300)
Q Consensus 134 ~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~---------------- 196 (300)
|+++ +|.+++.. .+.+++..++.++.||+.||.|||++|++||||||+||+++.++...+.+
T Consensus 80 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 158 (284)
T cd07839 80 YCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSA 158 (284)
T ss_pred cCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCC
Confidence 9975 78777764 55799999999999999999999999999999999999998776543322
Q ss_pred ---eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhC----------------C
Q 040812 197 ---SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFR----------------E 257 (300)
Q Consensus 197 ---~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~----------------~ 257 (300)
+..|.+||.... ...++.++|||||||++|+|+||..||............+...... .
T Consensus 159 ~~~~~~y~aPE~~~~--~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd07839 159 EVVTLWYRPPDVLFG--AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKP 236 (284)
T ss_pred CccccCCcChHHHhC--CcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccc
Confidence 123455554321 2345779999999999999999999975544332222211111000 0
Q ss_pred CCC---------CCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 258 PPS---------LPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 258 ~~~---------~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
.+. ....++++++++|.+||.. ||.+|||++++++||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~-~P~~R~t~~~il~h~~f 284 (284)
T cd07839 237 YPMYPATTSLVNVVPKLNSTGRDLLQNLLVC-NPVQRISAEEALQHPYF 284 (284)
T ss_pred cCCCCCcchhhhhcccCCHHHHHHHHHHhcC-ChhhcCCHHHHhcCCCC
Confidence 000 1124678899999999999 99999999999999998
No 114
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=2.7e-43 Score=307.87 Aligned_cols=238 Identities=26% Similarity=0.368 Sum_probs=185.7
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCC-----CCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG-----TPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv 131 (300)
++|++.+.||+|+||.||++++..+++.||+|++..... ...+.+|+.++..++|+||+++++++.... ..|+|
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~-~~~lv 79 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDEN-YLYLV 79 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC-EEEEE
Confidence 479999999999999999999999999999999864221 112356889999999999999999998764 89999
Q ss_pred EeccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcc---------------
Q 040812 132 MEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG--------------- 195 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~--------------- 195 (300)
|||++||+|.+++.. ...+++..++.++.|++.||.|||++||+||||||+|||++.++...+.
T Consensus 80 ~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 159 (331)
T cd05624 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQ 159 (331)
T ss_pred EeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCcee
Confidence 999999999999986 4579999999999999999999999999999999999999877654322
Q ss_pred -----ceeeccccccccccC--CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCC---CCC
Q 040812 196 -----YSCLYESGEARHRKH--GGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLP---ECS 265 (300)
Q Consensus 196 -----~~~~~~~~~~~~~~~--~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 265 (300)
++..|.+||...... .+.++.++|||||||++|||+||+.||...........+.. ......++ ..+
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~---~~~~~~~p~~~~~~ 236 (331)
T cd05624 160 SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN---HEERFQFPSHITDV 236 (331)
T ss_pred eccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHc---CCCcccCCCccccC
Confidence 223355666543211 13467799999999999999999999965433222211111 11112222 346
Q ss_pred ChHHHHHHHHHhccCCCCC--CCCHHHHhcCCCCCC
Q 040812 266 SEKFRDFIRCCLQKGDPSK--RWTASQLLSHPFLAD 299 (300)
Q Consensus 266 ~~~l~~li~~~l~~~dp~~--Rpt~~~~l~hpw~~~ 299 (300)
+++++++|.+||.. ++++ |++++++++||||++
T Consensus 237 ~~~~~~li~~ll~~-~~~~~~~~~~~~~~~h~~f~~ 271 (331)
T cd05624 237 SEEAKDLIQRLICS-RERRLGQNGIEDFKKHAFFEG 271 (331)
T ss_pred CHHHHHHHHHHccC-chhhcCCCCHHHHhcCCCcCC
Confidence 88999999999986 6554 568999999999975
No 115
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=3.1e-43 Score=306.28 Aligned_cols=227 Identities=24% Similarity=0.369 Sum_probs=182.6
Q ss_pred eeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC-----CCHHHH-HHHHhcCCCceeEeceeeeCCCCcEEEEEeccC
Q 040812 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP-----PNPQEL-NILRQTNSPYIVKCHQIFTKPSGEVSILMEYMD 136 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----~~~~E~-~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~ 136 (300)
+.||+|+||.||+|++..+++.||+|++....... ....|. .+++.++||||+++++++.... ..|+||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~-~~~lv~e~~~ 79 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAE-KLYFVLDYVN 79 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCC-EEEEEEcCCC
Confidence 46999999999999999999999999987532211 122343 3578899999999999988765 8999999999
Q ss_pred CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce-------------------
Q 040812 137 AGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS------------------- 197 (300)
Q Consensus 137 ~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~------------------- 197 (300)
+++|...+.....+++..++.++.||+.||.|||++||+||||||+||+++.++...++++
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt 159 (321)
T cd05603 80 GGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGT 159 (321)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccCC
Confidence 9999999988778999999999999999999999999999999999999998765443322
Q ss_pred eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHh
Q 040812 198 CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCL 277 (300)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 277 (300)
..|.+||... +..++.++|||||||++|||++|..||...+.. .....+ ...+..++...+..+.++|.+||
T Consensus 160 ~~y~aPE~~~---~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~----~~~~~i-~~~~~~~~~~~~~~~~~li~~~l 231 (321)
T cd05603 160 PEYLAPEVLR---KEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVS----QMYDNI-LHKPLQLPGGKTVAACDLLVGLL 231 (321)
T ss_pred cccCCHHHhc---CCCCCCcCcccccchhhhhhhcCCCCCCCCCHH----HHHHHH-hcCCCCCCCCCCHHHHHHHHHHc
Confidence 2345555432 445678999999999999999999999654321 222222 23445666778899999999999
Q ss_pred ccCCCCCCCCH----HHHhcCCCCCC
Q 040812 278 QKGDPSKRWTA----SQLLSHPFLAD 299 (300)
Q Consensus 278 ~~~dp~~Rpt~----~~~l~hpw~~~ 299 (300)
+. ||++|+++ .++++|+||..
T Consensus 232 ~~-~p~~R~~~~~~~~~~~~~~~~~~ 256 (321)
T cd05603 232 HK-DQRRRLGAKADFLEIKNHVFFSP 256 (321)
T ss_pred cC-CHhhcCCCCCCHHHHhCCCCcCC
Confidence 99 99999975 59999999975
No 116
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=2.5e-43 Score=307.31 Aligned_cols=227 Identities=24% Similarity=0.365 Sum_probs=181.5
Q ss_pred eeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC-----CCHHHHH-HHHhcCCCceeEeceeeeCCCCcEEEEEeccC
Q 040812 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP-----PNPQELN-ILRQTNSPYIVKCHQIFTKPSGEVSILMEYMD 136 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~ 136 (300)
+.||+|+||.||+|++..+++.||+|++....... ....|.. +++.++||||+++++++.... ..|+||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~-~~~lv~e~~~ 79 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTE-KLYFVLDFVN 79 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCC-EEEEEEcCCC
Confidence 46999999999999999999999999987542211 1233443 467799999999999988754 8999999999
Q ss_pred CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-------------------e
Q 040812 137 AGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY-------------------S 197 (300)
Q Consensus 137 ~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~-------------------~ 197 (300)
+|+|..++.....+++..++.++.||+.||.|||++||+||||||+|||++.++...+.+ +
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt 159 (325)
T cd05604 80 GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGT 159 (325)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccCC
Confidence 999999998888899999999999999999999999999999999999998876543222 2
Q ss_pred eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHh
Q 040812 198 CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCL 277 (300)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 277 (300)
..|.+||... +..++.++|||||||++|||++|..||...+.. .....+. ......+...+..+.++|.+||
T Consensus 160 ~~y~aPE~~~---~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~ll~~ll 231 (325)
T cd05604 160 PEYLAPEVIR---KQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA----EMYDNIL-HKPLVLRPGASLTAWSILEELL 231 (325)
T ss_pred hhhCCHHHHc---CCCCCCcCccccccceehhhhcCCCCCCCCCHH----HHHHHHH-cCCccCCCCCCHHHHHHHHHHh
Confidence 3355555543 455678999999999999999999999754322 2222222 2233444567889999999999
Q ss_pred ccCCCCCCCCH----HHHhcCCCCCC
Q 040812 278 QKGDPSKRWTA----SQLLSHPFLAD 299 (300)
Q Consensus 278 ~~~dp~~Rpt~----~~~l~hpw~~~ 299 (300)
.. ||++||++ .++++||||+.
T Consensus 232 ~~-~p~~R~~~~~~~~~i~~h~~f~~ 256 (325)
T cd05604 232 EK-DRQRRLGAKEDFLEIQEHPFFES 256 (325)
T ss_pred cc-CHHhcCCCCCCHHHHhcCCCcCC
Confidence 99 99999976 59999999975
No 117
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.6e-42 Score=301.11 Aligned_cols=233 Identities=31% Similarity=0.488 Sum_probs=188.8
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC-----CCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP-----PNPQELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv 131 (300)
.+|++.+.||+|+||.||+|.+..+++.||+|.+....... .+.+|+.++++++|+||+++++.+.... ..|+|
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~lv 79 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTET-YLCLV 79 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCC-EEEEE
Confidence 36899999999999999999999999999999987654332 2456999999999999999999987754 89999
Q ss_pred EeccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-------------
Q 040812 132 MEYMDAGSLEIYVKSR--GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY------------- 196 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~------------- 196 (300)
|||+.+++|.+++... ..+++..++.++.|++.||.|||+.|++|+||||+||+++.++...++.
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~ 159 (316)
T cd05574 80 MDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPP 159 (316)
T ss_pred EEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhcccccccc
Confidence 9999999999998753 4689999999999999999999999999999999999998765432221
Q ss_pred -----------------------------------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 040812 197 -----------------------------------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPG 241 (300)
Q Consensus 197 -----------------------------------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 241 (300)
+..|.+||... +..++.++|||||||++|+|++|..||...+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~ 236 (316)
T cd05574 160 VSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVIS---GDGHGSAVDWWTLGILLYEMLYGTTPFKGSN 236 (316)
T ss_pred cccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHc---CCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 11244444432 4456779999999999999999999997654
Q ss_pred CCchHHHHHHHHhhCCCCCCCC--CCChHHHHHHHHHhccCCCCCCCC----HHHHhcCCCCCC
Q 040812 242 QEPDFLSLMLAICFREPPSLPE--CSSEKFRDFIRCCLQKGDPSKRWT----ASQLLSHPFLAD 299 (300)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~li~~~l~~~dp~~Rpt----~~~~l~hpw~~~ 299 (300)
....+.... ......+. ..++.+.++|.+||.. ||++||+ ++++++||||++
T Consensus 237 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~li~~~l~~-~p~~R~s~~~~~~~ll~~~~~~~ 294 (316)
T cd05574 237 RDETFSNIL-----KKEVTFPGSPPVSSSARDLIRKLLVK-DPSKRLGSKRGAAEIKQHPFFRG 294 (316)
T ss_pred hHHHHHHHh-----cCCccCCCccccCHHHHHHHHHHccC-CHhHCCCchhhHHHHHcCchhhc
Confidence 433322222 11222222 3689999999999999 9999999 999999999975
No 118
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.1e-42 Score=306.95 Aligned_cols=237 Identities=23% Similarity=0.315 Sum_probs=181.8
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC----CCCHHHHHHHHhcCCCceeEeceeeeCCC-----
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT----PPNPQELNILRQTNSPYIVKCHQIFTKPS----- 125 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~----- 125 (300)
-.++|++.+.||+|+||.||++.+..+++.||+|.+...... ....+|+.+++.++||||+++++++....
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 467899999999999999999999999999999998654322 12356999999999999999999875432
Q ss_pred CcEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc---------
Q 040812 126 GEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY--------- 196 (300)
Q Consensus 126 ~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~--------- 196 (300)
...|+||||+++ +|.+.+.. .+++..++.++.|++.||.|||++||+||||||+|||++.++...+++
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~ 171 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 171 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCC
Confidence 247999999976 67766653 588999999999999999999999999999999999998876543322
Q ss_pred ---------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHh-------------
Q 040812 197 ---------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAIC------------- 254 (300)
Q Consensus 197 ---------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~------------- 254 (300)
+..|.+||... +..++.++|||||||++|+|++|+.||...+........+....
T Consensus 172 ~~~~~~~~~t~~y~aPE~~~---~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (355)
T cd07874 172 SFMMTPYVVTRYYRAPEVIL---GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 248 (355)
T ss_pred ccccCCccccCCccCHHHHc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHH
Confidence 23355555543 45577899999999999999999999965432222111111100
Q ss_pred -----hCC-------------------CCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCC
Q 040812 255 -----FRE-------------------PPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLA 298 (300)
Q Consensus 255 -----~~~-------------------~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~ 298 (300)
... ....+...+..++++|.+||.. ||++|||+.|+++||||.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~-dP~~Rps~~ell~hp~~~ 315 (355)
T cd07874 249 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI-DPAKRISVDEALQHPYIN 315 (355)
T ss_pred HHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcC-CchhcCCHHHHhcCcchh
Confidence 000 0011122356789999999999 999999999999999996
No 119
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.2e-42 Score=296.72 Aligned_cols=239 Identities=32% Similarity=0.485 Sum_probs=192.0
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC--CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEE
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILM 132 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~ 132 (300)
+.++|++.+.||+|+||.||++.+..++..+|+|++...... ..+.+|+.++++++|+||+++++.+.... ..|+||
T Consensus 3 ~~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~ 81 (280)
T cd06611 3 PNDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYEN-KLWILI 81 (280)
T ss_pred chhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCC-eEEEEe
Confidence 346799999999999999999999989999999998654322 23467999999999999999999988754 899999
Q ss_pred eccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc---------------
Q 040812 133 EYMDAGSLEIYVKSR-GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY--------------- 196 (300)
Q Consensus 133 e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~--------------- 196 (300)
||+++++|.+++... ..+++..++.++.|++.||.|||++|++|+||||+||+++.++...+.+
T Consensus 82 e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~ 161 (280)
T cd06611 82 EFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRD 161 (280)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhcccccccc
Confidence 999999999998764 4699999999999999999999999999999999999998765443322
Q ss_pred ----eeeccccccccc--cCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCC--CCCCCCChH
Q 040812 197 ----SCLYESGEARHR--KHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPP--SLPECSSEK 268 (300)
Q Consensus 197 ----~~~~~~~~~~~~--~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 268 (300)
+..|.+||.... ..+..++.++|||||||++|+|++|+.||...... ..+........+ ..+..++.+
T Consensus 162 ~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 237 (280)
T cd06611 162 TFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM----RVLLKILKSEPPTLDQPSKWSSS 237 (280)
T ss_pred eeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH----HHHHHHhcCCCCCcCCcccCCHH
Confidence 223455554321 12334567899999999999999999999654332 222222222222 235567899
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 269 FRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 269 l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
+.++|.+||.. ||++||+++++++||||.+
T Consensus 238 ~~~li~~~l~~-~p~~Rps~~~il~~~~~~~ 267 (280)
T cd06611 238 FNDFLKSCLVK-DPDDRPTAAELLKHPFVSD 267 (280)
T ss_pred HHHHHHHHhcc-ChhhCcCHHHHhcChhhcc
Confidence 99999999999 9999999999999999976
No 120
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-44 Score=311.37 Aligned_cols=234 Identities=21% Similarity=0.362 Sum_probs=195.0
Q ss_pred CCccCCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC----CCCHHHHHHHHhcCCCceeEeceeeeCCC
Q 040812 50 GQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT----PPNPQELNILRQTNSPYIVKCHQIFTKPS 125 (300)
Q Consensus 50 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 125 (300)
..+....++..+...||+|+||+||+|+|-+ .||||++..+... +.|.+|+.++++-+|.||+-++|++..+.
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~ 461 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPP 461 (678)
T ss_pred cccccCHHHhhccceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCc
Confidence 3445566778899999999999999999986 6999999866544 34678999999999999999999998764
Q ss_pred CcEEEEEeccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcccee------
Q 040812 126 GEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSC------ 198 (300)
Q Consensus 126 ~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~------ 198 (300)
+.||..+|+|.+|..+++. ..+|.....+.|++||++|+.|||.++|+|||||..||++.+++...+|+++
T Consensus 462 --~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~ 539 (678)
T KOG0193|consen 462 --LAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKT 539 (678)
T ss_pred --eeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeee
Confidence 4999999999999999975 3479999999999999999999999999999999999999998776555443
Q ss_pred ---------------eccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhC----CCC
Q 040812 199 ---------------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFR----EPP 259 (300)
Q Consensus 199 ---------------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~----~~~ 259 (300)
.|++||.........+++.+|||||||++|||+||.+||.....+ +++..+..+ ...
T Consensus 540 ~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~d----qIifmVGrG~l~pd~s 615 (678)
T KOG0193|consen 540 RWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRD----QIIFMVGRGYLMPDLS 615 (678)
T ss_pred eeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChh----heEEEecccccCccch
Confidence 378888877777888999999999999999999999999743333 333333333 222
Q ss_pred CCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 260 SLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 260 ~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
..-.+++.++++|+..||.. ++++||.+.+||.
T Consensus 616 ~~~s~~pk~mk~Ll~~C~~~-~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 616 KIRSNCPKAMKRLLSDCWKF-DREERPLFPQLLS 648 (678)
T ss_pred hhhccCHHHHHHHHHHHHhc-CcccCccHHHHHH
Confidence 33456678999999999999 9999999998875
No 121
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=2.6e-42 Score=296.31 Aligned_cols=234 Identities=29% Similarity=0.443 Sum_probs=193.2
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv 131 (300)
++|++.+.||+|+||.||++.+..+++.||+|+++..... ..+.+|+.++++++||||+++++++.... ..|+|
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~~v 79 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDS-NLYLV 79 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCC-eEEEE
Confidence 4689999999999999999999999999999998753321 23457999999999999999999988754 89999
Q ss_pred EeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc---------------
Q 040812 132 MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY--------------- 196 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~--------------- 196 (300)
|||+++++|.+++.....+++..+..++.|++.||.|||+.|++|+||+|+||+++.++...+..
T Consensus 80 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 159 (290)
T cd05580 80 MEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTLC 159 (290)
T ss_pred EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCCC
Confidence 99999999999998888899999999999999999999999999999999999999876543322
Q ss_pred -eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHH
Q 040812 197 -SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275 (300)
Q Consensus 197 -~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 275 (300)
+..|.+||... +...+.++||||||+++|+|+||..||...... ....... .....++...++.++++|.+
T Consensus 160 ~~~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~~~-~~~~~~~~~~~~~l~~li~~ 231 (290)
T cd05580 160 GTPEYLAPEIIL---SKGYGKAVDWWALGILIYEMLAGYPPFFDDNPI----QIYEKIL-EGKVRFPSFFSPDAKDLIRN 231 (290)
T ss_pred CCccccChhhhc---CCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHh-cCCccCCccCCHHHHHHHHH
Confidence 22344555432 345667899999999999999999999654421 1222222 33455677789999999999
Q ss_pred HhccCCCCCCC-----CHHHHhcCCCCCCC
Q 040812 276 CLQKGDPSKRW-----TASQLLSHPFLADA 300 (300)
Q Consensus 276 ~l~~~dp~~Rp-----t~~~~l~hpw~~~~ 300 (300)
||.. ||.+|+ +++|+++||||+++
T Consensus 232 ~l~~-~p~~R~~~~~~~~~~l~~~~~~~~~ 260 (290)
T cd05580 232 LLQV-DLTKRLGNLKNGVNDIKNHPWFAGI 260 (290)
T ss_pred HccC-CHHHccCcccCCHHHHHcCcccccC
Confidence 9999 999999 89999999999763
No 122
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=5.2e-42 Score=291.01 Aligned_cols=234 Identities=27% Similarity=0.347 Sum_probs=183.6
Q ss_pred Ccceeeeee--cCCcceEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHhc-CCCceeEeceeeeCCCCcEEEEEe
Q 040812 57 SQLEKLQVL--GQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQT-NSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 57 ~~y~~~~~l--g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
++|++.+.+ |+|+||.||++..+.+++.+|+|.+....... .|+.....+ +|+||+++++.+.... ..|+|||
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~---~e~~~~~~~~~h~~iv~~~~~~~~~~-~~~iv~e 89 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA---IEPMVHQLMKDNPNFIKLYYSVTTLK-GHVLIMD 89 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch---hhHHHHHHhhcCCCEEEEEEEEecCC-eeEEEEE
Confidence 455666665 99999999999999999999999987543221 133333322 7999999999998765 8999999
Q ss_pred ccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCC-CCCcc---------------ce
Q 040812 134 YMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKM-EHPCG---------------YS 197 (300)
Q Consensus 134 ~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~-~~~~~---------------~~ 197 (300)
|+++++|.+++.....+++..+..++.|++.||.|||+.|++||||||+||+++.++ ...++ ++
T Consensus 90 ~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~ 169 (267)
T PHA03390 90 YIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPSCYDGT 169 (267)
T ss_pred cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCCccCCCC
Confidence 999999999998877899999999999999999999999999999999999998876 32221 12
Q ss_pred eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHh
Q 040812 198 CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCL 277 (300)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 277 (300)
..|.+||... +..++.++|||||||++|+|++|..||................. ......+...++.+.++|.+||
T Consensus 170 ~~y~aPE~~~---~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l 245 (267)
T PHA03390 170 LDYFSPEKIK---GHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QKKLPFIKNVSKNANDFVQSML 245 (267)
T ss_pred CcccChhhhc---CCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-cccCCcccccCHHHHHHHHHHh
Confidence 3355666553 44567899999999999999999999975433221112222222 3333455578999999999999
Q ss_pred ccCCCCCCCC-HHHHhcCCCCCC
Q 040812 278 QKGDPSKRWT-ASQLLSHPFLAD 299 (300)
Q Consensus 278 ~~~dp~~Rpt-~~~~l~hpw~~~ 299 (300)
+. ||.+|++ ++++++||||++
T Consensus 246 ~~-~p~~R~~~~~~~l~h~~~~~ 267 (267)
T PHA03390 246 KY-NINYRLTNYNEIIKHPFLKI 267 (267)
T ss_pred cc-ChhhCCchHHHHhcCCcccC
Confidence 99 9999996 699999999975
No 123
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=2.3e-42 Score=292.98 Aligned_cols=229 Identities=21% Similarity=0.315 Sum_probs=184.4
Q ss_pred CCcceeeeeecCCcceEEEEEEEc---cCCeEEEEEEeecCCCCC---CCHHHHHHHHhcCCCceeEeceeeeCCCCcEE
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHK---QTLALYALKVMQCDRGTP---PNPQELNILRQTNSPYIVKCHQIFTKPSGEVS 129 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~---~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 129 (300)
..+|++.+.||+|+||.||+|.++ ..+..||+|.++...... .+.+|+.++++++||||+++++++.... ..|
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~ 82 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGN-TMM 82 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCC-CcE
Confidence 457899999999999999999875 456789999987643222 3467999999999999999999987654 899
Q ss_pred EEEeccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce-----------
Q 040812 130 ILMEYMDAGSLEIYVKSR-GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS----------- 197 (300)
Q Consensus 130 lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~----------- 197 (300)
+||||+++|+|.+++... ..+++..++.++.||+.||.|||++|++||||||+||+++.++...+..+
T Consensus 83 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~ 162 (266)
T cd05064 83 IVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAI 162 (266)
T ss_pred EEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccccch
Confidence 999999999999999764 47899999999999999999999999999999999999988754432221
Q ss_pred ---------eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCCh
Q 040812 198 ---------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSE 267 (300)
Q Consensus 198 ---------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (300)
..|.+||... +..++.++|||||||++||+++ |+.||...... .....+........+..++.
T Consensus 163 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 235 (266)
T cd05064 163 YTTMSGKSPVLWAAPEAIQ---YHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ----DVIKAVEDGFRLPAPRNCPN 235 (266)
T ss_pred hcccCCCCceeecCHHHHh---hCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH----HHHHHHHCCCCCCCCCCCCH
Confidence 2355555443 4567789999999999999875 99999654332 22222333344456777899
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 268 KFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 268 ~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
.+.+++.+||.. +|++||+++++++
T Consensus 236 ~~~~li~~c~~~-~p~~RP~~~~i~~ 260 (266)
T cd05064 236 LLHQLMLDCWQK-ERGERPRFSQIHS 260 (266)
T ss_pred HHHHHHHHHcCC-CchhCCCHHHHHH
Confidence 999999999999 9999999999875
No 124
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=2e-43 Score=285.90 Aligned_cols=238 Identities=29% Similarity=0.472 Sum_probs=188.0
Q ss_pred CCCcceee-eeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHh-cCCCceeEeceeeeCC---CCcEE
Q 040812 55 GLSQLEKL-QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQ-TNSPYIVKCHQIFTKP---SGEVS 129 (300)
Q Consensus 55 ~~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~---~~~~~ 129 (300)
-+++|.+. ++||-|-.|.|-.|..+.|++.+|+|++.. .....+|++..-. -.|||||.++++|++. ...+.
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D---s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLL 135 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD---SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLL 135 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc---CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeE
Confidence 35567664 679999999999999999999999999853 2344678776544 4799999999998753 23578
Q ss_pred EEEeccCCCCHHHHHHhCCC--CCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCC------Cccc-----
Q 040812 130 ILMEYMDAGSLEIYVKSRGR--LSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEH------PCGY----- 196 (300)
Q Consensus 130 lv~e~~~~~~L~~~l~~~~~--l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~------~~~~----- 196 (300)
+|||.++||.|...+++++. |+++++..|++||..|+.|||+.+|.||||||+|+|.+..... ++|+
T Consensus 136 iVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~ 215 (400)
T KOG0604|consen 136 IVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQ 215 (400)
T ss_pred eeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccC
Confidence 99999999999999998764 9999999999999999999999999999999999999865321 2222
Q ss_pred ----------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC---CchHHHHHHHHhhCCCCCCCC
Q 040812 197 ----------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQ---EPDFLSLMLAICFREPPSLPE 263 (300)
Q Consensus 197 ----------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~---~~~~~~~~~~~~~~~~~~~~~ 263 (300)
+..|.+||... ...|+..+|+||+||+||-|++|.+||..... .+.+..-+.......+..-++
T Consensus 216 ~~~~L~TPc~TPyYvaPevlg---~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs 292 (400)
T KOG0604|consen 216 EPGDLMTPCFTPYYVAPEVLG---PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWS 292 (400)
T ss_pred CCccccCCcccccccCHHHhC---chhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHh
Confidence 33455555443 34478899999999999999999999976533 223333332222333444456
Q ss_pred CCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 264 CSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 264 ~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
.+|+..+|+|+.+|.. +|++|.|+++++.|||++.
T Consensus 293 ~VSe~aKdlIR~LLkt-~PteRlTI~~~m~hpwi~~ 327 (400)
T KOG0604|consen 293 CVSEAAKDLIRKLLKT-EPTERLTIEEVMDHPWINQ 327 (400)
T ss_pred HHHHHHHHHHHHHhcC-CchhheeHHHhhcCchhcc
Confidence 7899999999999999 9999999999999999974
No 125
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=6.9e-42 Score=289.98 Aligned_cols=233 Identities=32% Similarity=0.457 Sum_probs=187.7
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC-------CCHHHHHHHHhcCCCceeEeceeeeCC-CCcEE
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP-------PNPQELNILRQTNSPYIVKCHQIFTKP-SGEVS 129 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-------~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~~ 129 (300)
+|+..+.||+|+||.||+|.+..+++.||+|.+....... ...+|+.++++++|+||+++++++... .+..+
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT 82 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence 6889999999999999999999999999999986543221 235699999999999999999987653 34689
Q ss_pred EEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcccee-----------
Q 040812 130 ILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSC----------- 198 (300)
Q Consensus 130 lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~----------- 198 (300)
++|||+++++|.+++.....+++..++.++.|++.||.|||+.+++|+||||+||+++.++...+.+++
T Consensus 83 l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 162 (266)
T cd06651 83 IFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMS 162 (266)
T ss_pred EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcccccccccc
Confidence 999999999999999887789999999999999999999999999999999999999877554332221
Q ss_pred -----------eccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCCh
Q 040812 199 -----------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSE 267 (300)
Q Consensus 199 -----------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (300)
.|.+||.. .+..++.++|||||||++|||+||+.||....... ...........+.++...++
T Consensus 163 ~~~~~~~~~~~~y~aPE~~---~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 236 (266)
T cd06651 163 GTGIRSVTGTPYWMSPEVI---SGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMA---AIFKIATQPTNPQLPSHISE 236 (266)
T ss_pred CCccccCCccccccCHHHh---CCCCCCchhhhHHHHHHHHHHHHCCCCccccchHH---HHHHHhcCCCCCCCchhcCH
Confidence 23344433 24456779999999999999999999997543322 22222223334566777889
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHhcCCCCC
Q 040812 268 KFRDFIRCCLQKGDPSKRWTASQLLSHPFLA 298 (300)
Q Consensus 268 ~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~ 298 (300)
.++++| +||.. +|++||+++|+++||||+
T Consensus 237 ~~~~li-~~~~~-~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 237 HARDFL-GCIFV-EARHRPSAEELLRHPFAQ 265 (266)
T ss_pred HHHHHH-HHhcC-ChhhCcCHHHHhcCcccc
Confidence 999999 67778 999999999999999996
No 126
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=8.9e-42 Score=287.35 Aligned_cols=231 Identities=31% Similarity=0.452 Sum_probs=189.3
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
+|++.+.||+|+||.||+|.+..+++.|++|.+...... ..+.+|+.++++++||||+++++++.... ..|+|||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e 79 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKG-KLNIVME 79 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCC-EEEEEEE
Confidence 478889999999999999999999999999998654322 23457999999999999999999988754 8999999
Q ss_pred ccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce--------------
Q 040812 134 YMDAGSLEIYVKSR--GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS-------------- 197 (300)
Q Consensus 134 ~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~-------------- 197 (300)
|+++++|.+++... ..+++..+..++.|++.||.|||+.|++|+||||+||+++.++...+.++
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~ 159 (256)
T cd08529 80 YAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFAN 159 (256)
T ss_pred eCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccchhh
Confidence 99999999999764 46899999999999999999999999999999999999998755433221
Q ss_pred -----eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHH
Q 040812 198 -----CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDF 272 (300)
Q Consensus 198 -----~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 272 (300)
..|.+||... +..++.++|+|||||++|+|+||+.||..... ............+..+..++..+.++
T Consensus 160 ~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (256)
T cd08529 160 TIVGTPYYLSPELCE---DKPYNEKSDVWALGVVLYECCTGKHPFDANNQ----GALILKIIRGVFPPVSQMYSQQLAQL 232 (256)
T ss_pred ccccCccccCHHHhc---CCCCCCccchHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHcCCCCCCccccCHHHHHH
Confidence 2244444433 44567799999999999999999999965442 12233333344555666788999999
Q ss_pred HHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 273 IRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 273 i~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
|.+||+. +|++||++.++++|||+
T Consensus 233 i~~~l~~-~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 233 IDQCLTK-DYRQRPDTFQLLRNPSL 256 (256)
T ss_pred HHHHccC-CcccCcCHHHHhhCCCC
Confidence 9999999 99999999999999996
No 127
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=5.8e-42 Score=293.22 Aligned_cols=237 Identities=26% Similarity=0.414 Sum_probs=185.9
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILM 132 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~ 132 (300)
++|++.+.||+|+||.||+|.++.+++.||+|.+...... ..+.+|+.++++++|+|++++++++.... ..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-~~~~v~ 79 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKR-KLHLVF 79 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCC-EEEEEE
Confidence 4689999999999999999999999999999998654322 23467999999999999999999988755 899999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce---------------
Q 040812 133 EYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS--------------- 197 (300)
Q Consensus 133 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~--------------- 197 (300)
||+++++|..++.....+++..++.++.|++.||.|||+.|++|+||||+||+++.++...+.++
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (286)
T cd07847 80 EYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTD 159 (286)
T ss_pred eccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcccccC
Confidence 99999999888877667999999999999999999999999999999999999997765432221
Q ss_pred ----eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhC-----------------
Q 040812 198 ----CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFR----------------- 256 (300)
Q Consensus 198 ----~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~----------------- 256 (300)
..|.+||.... +..++.++|||||||++|+|+||+.||...................
T Consensus 160 ~~~~~~~~aPE~~~~--~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (286)
T cd07847 160 YVATRWYRAPELLVG--DTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGL 237 (286)
T ss_pred cccccccCCHHHHhC--CCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccc
Confidence 23444444321 2346779999999999999999999997554332222221110000
Q ss_pred CCCC---------CCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 257 EPPS---------LPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 257 ~~~~---------~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
..+. .....+..+.+||.+||.. ||++||++.++++||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~-~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 238 SIPEPETREPLESKFPNISSPALSFLKGCLQM-DPTERLSCEELLEHPYF 286 (286)
T ss_pred cCCCcccccCHHHHhccCCHHHHHHHHHHhcC-CccccCCHHHHhcCCCC
Confidence 0000 0123578899999999999 99999999999999998
No 128
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=5.9e-42 Score=290.16 Aligned_cols=232 Identities=29% Similarity=0.419 Sum_probs=186.8
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC--------CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEE
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--------PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVS 129 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--------~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 129 (300)
+|++.+.||+|+||.||+|... +++.+|+|.+...... ..+.+|+.++++++|+||+++++++... +..|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~ 78 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTN-QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDD-NTIS 78 (265)
T ss_pred CccccceEeccCCeEEEEEEEc-CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecC-CeEE
Confidence 4788899999999999999874 6789999988754322 1235699999999999999999998875 4899
Q ss_pred EEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce------------
Q 040812 130 ILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS------------ 197 (300)
Q Consensus 130 lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~------------ 197 (300)
+||||+++++|.+++.+...+++..+..++.|++.||.|||+.|++|+||+|+||+++.++...+..+
T Consensus 79 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 158 (265)
T cd06631 79 IFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLH 158 (265)
T ss_pred EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhcccc
Confidence 99999999999999988778999999999999999999999999999999999999987655433221
Q ss_pred -------------eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCC
Q 040812 198 -------------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPEC 264 (300)
Q Consensus 198 -------------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (300)
..|.+||... +..++.++|||||||++|+|+||..||............. ......+..+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~pe~~~---~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~ 233 (265)
T cd06631 159 GTHSNMLKSMHGTPYWMAPEVIN---ESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIG--AHRGLMPRLPDS 233 (265)
T ss_pred ccccccccccCCCccccChhhhc---CCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhh--hccCCCCCCCCC
Confidence 1234444432 3446779999999999999999999996543322211111 111234456677
Q ss_pred CChHHHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 265 SSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 265 ~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
.+..+.++|.+||.. +|++||++.++++||||
T Consensus 234 ~~~~~~~~i~~~l~~-~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 234 FSAAAIDFVTSCLTR-DQHERPSALQLLRHDFL 265 (265)
T ss_pred CCHHHHHHHHHHhcC-CcccCCCHHHHhcCCCC
Confidence 899999999999999 99999999999999998
No 129
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=5.5e-43 Score=305.20 Aligned_cols=227 Identities=26% Similarity=0.396 Sum_probs=181.2
Q ss_pred eeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC-----CCHHHH-HHHHhcCCCceeEeceeeeCCCCcEEEEEeccC
Q 040812 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP-----PNPQEL-NILRQTNSPYIVKCHQIFTKPSGEVSILMEYMD 136 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----~~~~E~-~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~ 136 (300)
+.||+|+||.||+|++..+++.||+|++....... ....|. .+++.++|+||+++++++.... ..|+||||++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~-~~~lv~e~~~ 79 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD-KLYFVLDYIN 79 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCC-eEEEEEeCCC
Confidence 46999999999999999999999999987532111 112233 3467789999999999988765 8999999999
Q ss_pred CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-------------------e
Q 040812 137 AGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY-------------------S 197 (300)
Q Consensus 137 ~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~-------------------~ 197 (300)
+++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.++...+.+ +
T Consensus 80 ~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt 159 (325)
T cd05602 80 GGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGT 159 (325)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccCC
Confidence 999999998888899999999999999999999999999999999999998775543222 2
Q ss_pred eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHh
Q 040812 198 CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCL 277 (300)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 277 (300)
..|.+||... +..++.++|||||||++|+|++|..||...... .....+. ..+...+...+..+.++|.+||
T Consensus 160 ~~y~aPE~~~---~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~----~~~~~i~-~~~~~~~~~~~~~~~~li~~~l 231 (325)
T cd05602 160 PEYLAPEVLH---KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA----EMYDNIL-NKPLQLKPNITNSARHLLEGLL 231 (325)
T ss_pred ccccCHHHHc---CCCCCCccccccccHHHHHHhcCCCCCCCCCHH----HHHHHHH-hCCcCCCCCCCHHHHHHHHHHc
Confidence 3355555443 456778999999999999999999999754332 2222222 2334455578899999999999
Q ss_pred ccCCCCCCCCHH----HHhcCCCCCC
Q 040812 278 QKGDPSKRWTAS----QLLSHPFLAD 299 (300)
Q Consensus 278 ~~~dp~~Rpt~~----~~l~hpw~~~ 299 (300)
+. ||.+|+++. ++++|+||..
T Consensus 232 ~~-~p~~R~~~~~~~~~i~~~~~~~~ 256 (325)
T cd05602 232 QK-DRTKRLGAKDDFMEIKNHIFFSP 256 (325)
T ss_pred cc-CHHHCCCCCCCHHHHhcCcccCC
Confidence 99 999999876 8999999964
No 130
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=2.2e-43 Score=297.76 Aligned_cols=234 Identities=35% Similarity=0.539 Sum_probs=185.7
Q ss_pred ceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCC----HHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEec
Q 040812 59 LEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN----PQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEY 134 (300)
Q Consensus 59 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~----~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~ 134 (300)
|++.+.||+|+||.||++++..+++.||+|++......... .+|+.++++++|+||+++++++.... ..++|||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~-~~~~v~~~ 79 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDN-YLYIVMEY 79 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESS-EEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccc-cccccccc
Confidence 78999999999999999999999999999999865433222 34899999999999999999998754 89999999
Q ss_pred cCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcc---c---------------
Q 040812 135 MDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG---Y--------------- 196 (300)
Q Consensus 135 ~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~---~--------------- 196 (300)
+++++|.+++.....+++..+..++.||+.||.+||++|++|+||||+||+++.++...+. .
T Consensus 80 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 159 (260)
T PF00069_consen 80 CPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNPFV 159 (260)
T ss_dssp ETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSSS
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999977789999999999999999999999999999999999999976543222 1
Q ss_pred -eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhC-C--CCCCCCCCChHHHHH
Q 040812 197 -SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFR-E--PPSLPECSSEKFRDF 272 (300)
Q Consensus 197 -~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~l~~l 272 (300)
+..|.+||... .+...+.++||||||+++|+|++|..||...... +........... . ...........+.++
T Consensus 160 ~~~~y~aPE~~~--~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 236 (260)
T PF00069_consen 160 GTPEYMAPEVLQ--QGKKYTRKSDIWSLGIILYELLTGKLPFEESNSD-DQLEIIEKILKRPLPSSSQQSREKSEELRDL 236 (260)
T ss_dssp SSGGGSCHHHHT--TTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHH-HHHHHHHHHHHTHHHHHTTSHTTSHHHHHHH
T ss_pred cccccccccccc--ccccccccccccccccccccccccccccccccch-hhhhhhhhcccccccccccccchhHHHHHHH
Confidence 22344554432 2556788999999999999999999999765111 111222211111 0 111111123889999
Q ss_pred HHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 273 IRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 273 i~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
|.+||.. ||++||++.++++||||
T Consensus 237 i~~~l~~-~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 237 IKKMLSK-DPEQRPSAEELLKHPWF 260 (260)
T ss_dssp HHHHSSS-SGGGSTTHHHHHTSGGG
T ss_pred HHHHccC-ChhHCcCHHHHhcCCCC
Confidence 9999999 99999999999999998
No 131
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=7.3e-42 Score=292.52 Aligned_cols=235 Identities=24% Similarity=0.401 Sum_probs=182.5
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
+|++.+.||+|+||.||+|.+..+++.||+|.++..... ....+|+.++++++||||+++++++..+. ..|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~~v~e 79 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQES-RLYLIFE 79 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCC-eEEEEEe
Confidence 488999999999999999999999999999998654322 23467999999999999999999988754 8999999
Q ss_pred ccCCCCHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce-------------
Q 040812 134 YMDAGSLEIYVKSR---GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS------------- 197 (300)
Q Consensus 134 ~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~------------- 197 (300)
|++ ++|.+++... ..+++..++.++.||+.||.|||++|++|+||||+||+++.++...+.++
T Consensus 80 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 158 (285)
T cd07861 80 FLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVY 158 (285)
T ss_pred cCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCcccc
Confidence 997 5888888642 46899999999999999999999999999999999999988765433222
Q ss_pred ------eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHh-----------------
Q 040812 198 ------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAIC----------------- 254 (300)
Q Consensus 198 ------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~----------------- 254 (300)
..|.+||.... ...++.++|||||||++|+|+||+.||.................
T Consensus 159 ~~~~~~~~y~aPE~~~~--~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (285)
T cd07861 159 THEVVTLWYRAPEVLLG--SPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYK 236 (285)
T ss_pred cCCcccccccChHHhcC--CCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHH
Confidence 23455554321 22356799999999999999999999975433221111111000
Q ss_pred -------hCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 255 -------FREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 255 -------~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
..........+++++.++|.+||.. ||++|||+.++++||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~-dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 237 NTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIY-DPAKRISAKKALNHPYF 285 (285)
T ss_pred hhccccCcchhHHhcCCCCHHHHHHHHHHhcC-ChhhCCCHHHHhcCCCC
Confidence 0000011234688899999999999 99999999999999998
No 132
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=5.8e-42 Score=294.98 Aligned_cols=237 Identities=27% Similarity=0.407 Sum_probs=189.9
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC--CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEE
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILM 132 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~ 132 (300)
...+|++.+.||+|+||.||+|.+..+++.||+|.+...... ..+.+|+.+++.+.|+||+++++.+.... ..|+||
T Consensus 18 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~-~~~lv~ 96 (296)
T cd06654 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD-ELWVVM 96 (296)
T ss_pred cccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCC-EEEEee
Confidence 446899999999999999999999999999999998754432 23457999999999999999999988754 899999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce---------------
Q 040812 133 EYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS--------------- 197 (300)
Q Consensus 133 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~--------------- 197 (300)
||+++++|.+++... .+++..+..++.|++.||.|||+.|++|+||||+||+++.++...+.++
T Consensus 97 e~~~~~~L~~~~~~~-~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~ 175 (296)
T cd06654 97 EYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST 175 (296)
T ss_pred cccCCCCHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccccccCc
Confidence 999999999998653 6899999999999999999999999999999999999987765433222
Q ss_pred ----eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHH
Q 040812 198 ----CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFI 273 (300)
Q Consensus 198 ----~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 273 (300)
..|.+||... +...+.++|||||||++|+|+||+.||............. .........+...+..+.++|
T Consensus 176 ~~~~~~y~aPE~~~---~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li 250 (296)
T cd06654 176 MVGTPYWMAPEVVT---RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA--TNGTPELQNPEKLSAIFRDFL 250 (296)
T ss_pred ccCCccccCHHHHc---CCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHh--cCCCCCCCCccccCHHHHHHH
Confidence 2344455433 4456789999999999999999999996544322111111 111112233556788999999
Q ss_pred HHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 274 RCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 274 ~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
.+||.. ||++||++.++++||||..
T Consensus 251 ~~~l~~-~p~~Rpt~~eil~~~~~~~ 275 (296)
T cd06654 251 NRCLDM-DVEKRGSAKELLQHQFLKI 275 (296)
T ss_pred HHHCcC-CcccCcCHHHHhhChhhhc
Confidence 999999 9999999999999999964
No 133
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=6.5e-42 Score=294.64 Aligned_cols=237 Identities=28% Similarity=0.419 Sum_probs=190.6
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC--CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEE
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILM 132 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~ 132 (300)
...+|++.+.||.|+||.||+|.+..+++.||+|.+...... ..+.+|+.+++.++|+||+++++++.... ..|+|+
T Consensus 17 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~ 95 (296)
T cd06655 17 PKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGD-ELFVVM 95 (296)
T ss_pred CcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCc-eEEEEE
Confidence 346799999999999999999999999999999998654322 23357999999999999999999988754 899999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc----------------
Q 040812 133 EYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY---------------- 196 (300)
Q Consensus 133 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~---------------- 196 (300)
||+++++|..++... .+++..+..++.|++.||.|||+.|++|+||||+||+++.++...+..
T Consensus 96 e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 174 (296)
T cd06655 96 EYLAGGSLTDVVTET-CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRST 174 (296)
T ss_pred EecCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccccCCC
Confidence 999999999988754 689999999999999999999999999999999999998765432222
Q ss_pred ---eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHH
Q 040812 197 ---SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFI 273 (300)
Q Consensus 197 ---~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 273 (300)
...|.+||... +..++.++|||||||++|+|+||..||............. .........+..+++.+.++|
T Consensus 175 ~~~~~~y~aPE~~~---~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~li 249 (296)
T cd06655 175 MVGTPYWMAPEVVT---RKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIA--TNGTPELQNPEKLSPIFRDFL 249 (296)
T ss_pred cCCCccccCcchhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH--hcCCcccCCcccCCHHHHHHH
Confidence 12344555433 4456779999999999999999999997654322221111 111122234566789999999
Q ss_pred HHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 274 RCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 274 ~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
.+||.. ||++||++.++++||||+.
T Consensus 250 ~~~l~~-dp~~Rpt~~~il~~~~~~~ 274 (296)
T cd06655 250 NRCLEM-DVEKRGSAKELLQHPFLKL 274 (296)
T ss_pred HHHhhc-ChhhCCCHHHHhhChHhhh
Confidence 999999 9999999999999999975
No 134
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=5.1e-42 Score=294.71 Aligned_cols=242 Identities=33% Similarity=0.479 Sum_probs=191.3
Q ss_pred ccCCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC--CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEE
Q 040812 52 EIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVS 129 (300)
Q Consensus 52 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 129 (300)
.+..-+.|++++.||+|+||.||+|++..+++.+|+|.+...... ..+.+|+.++++++|+||+++++.+..+. ..|
T Consensus 7 ~~~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~ 85 (292)
T cd06644 7 DLDPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDG-KLW 85 (292)
T ss_pred ccCcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCC-eEE
Confidence 344557899999999999999999999999999999998654321 23456999999999999999999987654 899
Q ss_pred EEEeccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc------------
Q 040812 130 ILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY------------ 196 (300)
Q Consensus 130 lv~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~------------ 196 (300)
+||||+++++|..++.. ...+++..+..++.|++.||.|||+.|++||||||+||+++.++...+.+
T Consensus 86 lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 165 (292)
T cd06644 86 IMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQ 165 (292)
T ss_pred EEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecccccc
Confidence 99999999999888764 45689999999999999999999999999999999999998765432221
Q ss_pred -------eeecccccccccc--CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCC--CCCCCCC
Q 040812 197 -------SCLYESGEARHRK--HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREP--PSLPECS 265 (300)
Q Consensus 197 -------~~~~~~~~~~~~~--~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 265 (300)
+..|.+||..... ....++.++|||||||++|||+||..||...... ........... ...+..+
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 241 (292)
T cd06644 166 RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM----RVLLKIAKSEPPTLSQPSKW 241 (292)
T ss_pred ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH----HHHHHHhcCCCccCCCCccc
Confidence 1235566654211 1234567899999999999999999999654322 22222221222 2234567
Q ss_pred ChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 266 SEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 266 ~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
+.++.++|.+||.. ||++||+++++++||||..
T Consensus 242 ~~~~~~li~~~l~~-~p~~Rp~~~~il~~~~~~~ 274 (292)
T cd06644 242 SMEFRDFLKTALDK-HPETRPSAAQLLEHPFVSS 274 (292)
T ss_pred CHHHHHHHHHHhcC-CcccCcCHHHHhcCccccc
Confidence 88999999999999 9999999999999999974
No 135
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=3.8e-42 Score=292.35 Aligned_cols=239 Identities=31% Similarity=0.467 Sum_probs=186.8
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-CCCHHHHHHHHhc-CCCceeEeceeeeCCC-----Cc
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-PPNPQELNILRQT-NSPYIVKCHQIFTKPS-----GE 127 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~E~~~l~~l-~h~niv~~~~~~~~~~-----~~ 127 (300)
..+.|++.+.||+|+||.||+|.+..+++.||+|.+...... ....+|+.+++++ +|+||+++++++.... ..
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~ 83 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ 83 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcE
Confidence 346789999999999999999999999999999998654322 2346789999988 6999999999886431 35
Q ss_pred EEEEEeccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc---------
Q 040812 128 VSILMEYMDAGSLEIYVKSR--GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY--------- 196 (300)
Q Consensus 128 ~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~--------- 196 (300)
.|+||||+.+++|.+++... ..+++..+..++.|++.||.|||+++|+|+||||+||+++.++...+.+
T Consensus 84 ~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~ 163 (272)
T cd06637 84 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR 163 (272)
T ss_pred EEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceeccc
Confidence 89999999999999999863 3589999999999999999999999999999999999999875443222
Q ss_pred ----------eeecccccccccc--CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCC
Q 040812 197 ----------SCLYESGEARHRK--HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPEC 264 (300)
Q Consensus 197 ----------~~~~~~~~~~~~~--~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (300)
+..|.+||..... .+..++.++|||||||++|||++|..||......... ............+..
T Consensus 164 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~ 240 (272)
T cd06637 164 TVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRAL---FLIPRNPAPRLKSKK 240 (272)
T ss_pred ccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHH---HHHhcCCCCCCCCCC
Confidence 2235566654321 1334677999999999999999999999654322111 111111222223345
Q ss_pred CChHHHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 265 SSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 265 ~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
.+.++.+||.+||.. ||++|||+.++++||||
T Consensus 241 ~~~~~~~li~~~l~~-~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 241 WSKKFQSFIESCLVK-NHSQRPTTEQLMKHPFI 272 (272)
T ss_pred cCHHHHHHHHHHcCC-ChhhCCCHHHHhhCCCC
Confidence 788999999999999 99999999999999998
No 136
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-43 Score=300.82 Aligned_cols=237 Identities=30% Similarity=0.458 Sum_probs=196.9
Q ss_pred CccCCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC----CCHHHHHHHHhcCCCceeEeceeeeCCCC
Q 040812 51 QEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP----PNPQELNILRQTNSPYIVKCHQIFTKPSG 126 (300)
Q Consensus 51 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 126 (300)
..+.++ |.+.+.||+|-|+.|-+|++.-+|+.||||++.+..... ...+|+..|+.++|||||++|++.....
T Consensus 14 gkIAGL--YDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQT- 90 (864)
T KOG4717|consen 14 GKIAGL--YDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQT- 90 (864)
T ss_pred cceeee--ehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccc-
Confidence 334444 888999999999999999999999999999997765443 2357999999999999999999987654
Q ss_pred cEEEEEeccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCC----CCccce----
Q 040812 127 EVSILMEYMDAGSLEIYVKSR-GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKME----HPCGYS---- 197 (300)
Q Consensus 127 ~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~----~~~~~~---- 197 (300)
.+|+|+|+-.+|+|++|+-+. ..+++..++.++.||+.|+.|+|+-.++||||||+|+.+.+... .++|+.
T Consensus 91 KlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~ 170 (864)
T KOG4717|consen 91 KLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ 170 (864)
T ss_pred eEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCC
Confidence 899999999999999999754 35999999999999999999999999999999999999875421 233333
Q ss_pred -----------eeccccccccccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCC
Q 040812 198 -----------CLYESGEARHRKHGG-YNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265 (300)
Q Consensus 198 -----------~~~~~~~~~~~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (300)
..|.+||... |. +..+++||||||||||-|++|++||...++.+..-.++ ......|..+
T Consensus 171 PG~kL~TsCGSLAYSAPEILL---GDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmIm-----DCKYtvPshv 242 (864)
T KOG4717|consen 171 PGKKLTTSCGSLAYSAPEILL---GDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIM-----DCKYTVPSHV 242 (864)
T ss_pred CcchhhcccchhhccCchhhh---cCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhh-----cccccCchhh
Confidence 3344555443 33 34578999999999999999999998776654433333 4567889999
Q ss_pred ChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 266 SEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 266 ~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
+.+.++||..||+. ||.+|.+.++|..|+|++.
T Consensus 243 S~eCrdLI~sMLvR-dPkkRAslEeI~s~~Wlq~ 275 (864)
T KOG4717|consen 243 SKECRDLIQSMLVR-DPKKRASLEEIVSTSWLQA 275 (864)
T ss_pred hHHHHHHHHHHHhc-CchhhccHHHHhccccccC
Confidence 99999999999999 9999999999999999974
No 137
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.9e-42 Score=296.15 Aligned_cols=237 Identities=28% Similarity=0.418 Sum_probs=189.5
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC--CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEE
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILM 132 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~ 132 (300)
...+|++.+.||+|+||.||++.+..+++.||+|.+...... ..+.+|+.+++.++|+||+++++++.... ..|+||
T Consensus 17 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-~~~lv~ 95 (297)
T cd06656 17 PKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD-ELWVVM 95 (297)
T ss_pred hhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCC-EEEEee
Confidence 347899999999999999999999999999999998654332 22356899999999999999999988754 899999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcccee--------------
Q 040812 133 EYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSC-------------- 198 (300)
Q Consensus 133 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~-------------- 198 (300)
||+++++|.+++.. ..+++..+..++.|++.||.|||+.|++||||||+||+++.++...+.+++
T Consensus 96 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~ 174 (297)
T cd06656 96 EYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST 174 (297)
T ss_pred cccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccCcCc
Confidence 99999999999865 368999999999999999999999999999999999999877654333222
Q ss_pred -----eccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHH
Q 040812 199 -----LYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFI 273 (300)
Q Consensus 199 -----~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 273 (300)
.|.+||... +..++.++|+|||||++|+|+||..||...+......... .........+...+..+.+++
T Consensus 175 ~~~~~~y~aPE~~~---~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~li 249 (297)
T cd06656 175 MVGTPYWMAPEVVT---RKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIA--TNGTPELQNPERLSAVFRDFL 249 (297)
T ss_pred ccCCccccCHHHHc---CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeec--cCCCCCCCCccccCHHHHHHH
Confidence 233344332 4456789999999999999999999996544322111111 111122234566788899999
Q ss_pred HHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 274 RCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 274 ~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
.+||.. ||++||+++++++||||+.
T Consensus 250 ~~~l~~-~p~~Rps~~~il~~~~~~~ 274 (297)
T cd06656 250 NRCLEM-DVDRRGSAKELLQHPFLKL 274 (297)
T ss_pred HHHccC-ChhhCcCHHHHhcCchhcc
Confidence 999999 9999999999999999975
No 138
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=4.5e-42 Score=295.78 Aligned_cols=238 Identities=26% Similarity=0.389 Sum_probs=185.1
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-------CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEE
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-------PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSI 130 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~l 130 (300)
+|++.+.||+|+||.||+|.+..+++.||+|.+...... ....+|+.++++++|+||+++++++... ...++
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~~~l 79 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHK-SNINL 79 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecC-CEEEE
Confidence 478899999999999999999999999999999754432 1224699999999999999999999875 48999
Q ss_pred EEeccCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcccee-----------
Q 040812 131 LMEYMDAGSLEIYVKSRG-RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSC----------- 198 (300)
Q Consensus 131 v~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~----------- 198 (300)
||||+ +++|.+++.... .+++..++.++.||+.||.|||++|++|+||||+||+++.++...+++++
T Consensus 80 v~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~ 158 (298)
T cd07841 80 VFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRK 158 (298)
T ss_pred EEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCcc
Confidence 99999 889999998765 79999999999999999999999999999999999999987665443322
Q ss_pred --------eccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhC--------------
Q 040812 199 --------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFR-------------- 256 (300)
Q Consensus 199 --------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~-------------- 256 (300)
.|.+||... ....++.++|||||||++|||++|.+||...................
T Consensus 159 ~~~~~~~~~y~aPE~~~--~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (298)
T cd07841 159 MTHQVVTRWYRAPELLF--GARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDY 236 (298)
T ss_pred ccccccceeeeCHHHHh--CCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccccc
Confidence 234444331 12345779999999999999999988776543322211111110000
Q ss_pred ----CCC-----CCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCCC
Q 040812 257 ----EPP-----SLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300 (300)
Q Consensus 257 ----~~~-----~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~~ 300 (300)
..+ ......+..+.++|.+||.. ||++|||+.++++||||.+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~-~P~~R~s~~e~l~~~~~~~~ 288 (298)
T cd07841 237 VEFKPFPPTPLKQIFPAASDDALDLLQRLLTL-NPNKRITARQALEHPYFSND 288 (298)
T ss_pred ccccccCCcchhhhcccccHHHHHHHHHHhcC-CcccCcCHHHHhhCccccCC
Confidence 000 01133467899999999999 99999999999999999873
No 139
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=3.6e-42 Score=289.74 Aligned_cols=234 Identities=36% Similarity=0.509 Sum_probs=189.3
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEeccC
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMD 136 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~ 136 (300)
++|++.+.||+|+||.||+|.+..+++.+++|.+........+.+|+.++++++|+||+++++++.... ..|+++||+.
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~-~~~l~~e~~~ 81 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDSPYIVKYYGSYFKNT-DLWIVMEYCG 81 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCC-cEEEEEecCC
Confidence 578999999999999999999998899999999876544445678999999999999999999988764 8999999999
Q ss_pred CCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce------------------
Q 040812 137 AGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS------------------ 197 (300)
Q Consensus 137 ~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~------------------ 197 (300)
+++|.+++.. ...+++..++.++.|++.||.|||+.|++|+||+|+||+++.++...++.+
T Consensus 82 ~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 161 (256)
T cd06612 82 AGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIG 161 (256)
T ss_pred CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCccccccccC
Confidence 9999999975 446899999999999999999999999999999999999998765433322
Q ss_pred -eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHH
Q 040812 198 -CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276 (300)
Q Consensus 198 -~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 276 (300)
..|.+||... +...+.++|||||||++|+|+||+.||............. .........+...+.++.++|.+|
T Consensus 162 ~~~y~~PE~~~---~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~ 236 (256)
T cd06612 162 TPFWMAPEVIQ---EIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIP--NKPPPTLSDPEKWSPEFNDFVKKC 236 (256)
T ss_pred CccccCHHHHh---cCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhc--cCCCCCCCchhhcCHHHHHHHHHH
Confidence 2344444432 4456779999999999999999999997543322211111 011111223445678999999999
Q ss_pred hccCCCCCCCCHHHHhcCCCC
Q 040812 277 LQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 277 l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
|+. ||++|||+.++++||||
T Consensus 237 l~~-~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 237 LVK-DPEERPSAIQLLQHPFI 256 (256)
T ss_pred Hhc-ChhhCcCHHHHhcCCCC
Confidence 999 99999999999999998
No 140
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.2e-41 Score=302.22 Aligned_cols=234 Identities=23% Similarity=0.314 Sum_probs=181.9
Q ss_pred CcceeeeeecCCcceEEEEEEEc--cCCeEEEEEEeecCCCCCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEec
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHK--QTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEY 134 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~ 134 (300)
.+|++++.||+|+||.||+|... .+++.||+|.+... ....+|+.++++++|+||+++++++.... ..|+|||+
T Consensus 92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~---~~~~~E~~il~~l~h~~iv~~~~~~~~~~-~~~lv~e~ 167 (392)
T PHA03207 92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG---KTPGREIDILKTISHRAIINLIHAYRWKS-TVCMVMPK 167 (392)
T ss_pred CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc---ccHHHHHHHHHhcCCCCccceeeeEeeCC-EEEEEehh
Confidence 46999999999999999999764 35678999987643 23467999999999999999999988754 89999999
Q ss_pred cCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc------------------
Q 040812 135 MDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY------------------ 196 (300)
Q Consensus 135 ~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~------------------ 196 (300)
+. ++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.++...+.+
T Consensus 168 ~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~ 246 (392)
T PHA03207 168 YK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYG 246 (392)
T ss_pred cC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcccccccccc
Confidence 96 58989887777899999999999999999999999999999999999998775543322
Q ss_pred ---eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCch---HHHHHHHH-----------------
Q 040812 197 ---SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPD---FLSLMLAI----------------- 253 (300)
Q Consensus 197 ---~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~---~~~~~~~~----------------- 253 (300)
+..|.+||... +..++.++|||||||++|||++|+.||........ +..++...
T Consensus 247 ~~gt~~y~aPE~~~---~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~ 323 (392)
T PHA03207 247 WSGTLETNSPELLA---LDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCK 323 (392)
T ss_pred cccccCccCHhHhc---CCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHH
Confidence 22344454432 45577899999999999999999999976433211 11111100
Q ss_pred -----hhCCC--CCCC-----CCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 254 -----CFREP--PSLP-----ECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 254 -----~~~~~--~~~~-----~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
..... ...+ ...+.++.++|.+||.. ||++|||+.|+++||||.+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~-dp~~Rpsa~e~l~~p~f~~ 380 (392)
T PHA03207 324 HFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTF-DQEFRPSAQDILSLPLFTK 380 (392)
T ss_pred HHHhhcccccCCccccchhhccCcchhHHHHHHHHhcc-ChhhCCCHHHHhhCchhhc
Confidence 00000 0111 12456789999999999 9999999999999999975
No 141
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=9.2e-42 Score=288.23 Aligned_cols=239 Identities=33% Similarity=0.458 Sum_probs=188.6
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC--CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
.++|++.+.||+|+||.||+|.+..+++.+++|++...... ....+|+.++++++||||+++++.+.... ..|++||
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-~~~l~~e 80 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRD-KLWIVME 80 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCC-EEEEEEe
Confidence 36799999999999999999999988999999998754332 23467999999999999999999987754 8999999
Q ss_pred ccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc----------------
Q 040812 134 YMDAGSLEIYVKSR-GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY---------------- 196 (300)
Q Consensus 134 ~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~---------------- 196 (300)
|+++++|.+++... ..+++..+..++.|++.||.|||++|++|+||||+||+++.++...+.+
T Consensus 81 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~ 160 (262)
T cd06613 81 YCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKS 160 (262)
T ss_pred CCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhhcccc
Confidence 99999999999775 6899999999999999999999999999999999999999876543322
Q ss_pred ---eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHH
Q 040812 197 ---SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFI 273 (300)
Q Consensus 197 ---~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 273 (300)
...|.+||.........++.++|||||||++|+|+||..||........................+...+.++.++|
T Consensus 161 ~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 240 (262)
T cd06613 161 FIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFI 240 (262)
T ss_pred ccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHH
Confidence 12245555543221225677999999999999999999999764432222111111001111122334567899999
Q ss_pred HHHhccCCCCCCCCHHHHhcCCC
Q 040812 274 RCCLQKGDPSKRWTASQLLSHPF 296 (300)
Q Consensus 274 ~~~l~~~dp~~Rpt~~~~l~hpw 296 (300)
.+||.. ||.+|||++++++|+|
T Consensus 241 ~~~l~~-~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 241 KKCLTK-DPKKRPTATKLLQHPF 262 (262)
T ss_pred HHHcCC-ChhhCCCHHHHhcCCC
Confidence 999999 9999999999999999
No 142
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=2.3e-41 Score=286.61 Aligned_cols=234 Identities=32% Similarity=0.421 Sum_probs=187.4
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC-------CCHHHHHHHHhcCCCceeEeceeeeCCC-CcE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP-------PNPQELNILRQTNSPYIVKCHQIFTKPS-GEV 128 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-------~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~ 128 (300)
.+|++.+.||+|+||.||.+.+..+++.||+|.+....... .+.+|+.+++++.|+||+++++++.... ..+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 46899999999999999999999999999999886433221 2346999999999999999999876542 368
Q ss_pred EEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce-----------
Q 040812 129 SILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS----------- 197 (300)
Q Consensus 129 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~----------- 197 (300)
++||||+++++|.+++.....+++..+..++.|++.||.|||+++++|+||||+||+++.++...+.++
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~ 161 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICL 161 (265)
T ss_pred EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccccc
Confidence 899999999999999987777899999999999999999999999999999999999987654432221
Q ss_pred -----------eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCC
Q 040812 198 -----------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSS 266 (300)
Q Consensus 198 -----------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (300)
..|.+||... +...+.++|||||||++|+|++|+.||...... ............+..|...+
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 235 (265)
T cd06652 162 SGTGMKSVTGTPYWMSPEVIS---GEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM---AAIFKIATQPTNPVLPPHVS 235 (265)
T ss_pred cccccccCCCCccccChhhhc---CCCCCcchhHHHHHHHHHHHhhCCCCCCccchH---HHHHHHhcCCCCCCCchhhC
Confidence 2344555432 445677999999999999999999999654222 12222222233445566778
Q ss_pred hHHHHHHHHHhccCCCCCCCCHHHHhcCCCCC
Q 040812 267 EKFRDFIRCCLQKGDPSKRWTASQLLSHPFLA 298 (300)
Q Consensus 267 ~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~ 298 (300)
..+.++|.+|| . +|++||+++++++|||++
T Consensus 236 ~~~~~~i~~~l-~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 236 DHCRDFLKRIF-V-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred HHHHHHHHHHh-c-ChhhCCCHHHHhcCcccC
Confidence 88999999998 6 899999999999999985
No 143
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=8.8e-42 Score=291.38 Aligned_cols=234 Identities=35% Similarity=0.621 Sum_probs=185.5
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
++|++.+.||+|+||.||+|.+..+++.||+|.+..+... ..+.+|+.++++++||||+++++.+.... ..++|||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~e 79 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVEN-RISICTE 79 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECC-EEEEEEe
Confidence 3678899999999999999999999999999998654322 23457999999999999999999998765 8999999
Q ss_pred ccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-----------------
Q 040812 134 YMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY----------------- 196 (300)
Q Consensus 134 ~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~----------------- 196 (300)
|+++++|..+. .+++..+..++.|++.||.|||+.||+|+||||+||+++.++...+.+
T Consensus 80 ~~~~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~ 155 (279)
T cd06619 80 FMDGGSLDVYR----KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVG 155 (279)
T ss_pred cCCCCChHHhh----cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCCC
Confidence 99999997553 578999999999999999999999999999999999998876543322
Q ss_pred eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCch---HHHHHHHHhhCCCCCC-CCCCChHHHHH
Q 040812 197 SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPD---FLSLMLAICFREPPSL-PECSSEKFRDF 272 (300)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~l~~l 272 (300)
+..|.+||... +..++.++|||||||++|+|+||+.||........ .............+.. ....++++.++
T Consensus 156 ~~~y~aPE~~~---~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 232 (279)
T cd06619 156 TNAYMAPERIS---GEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHF 232 (279)
T ss_pred ChhhcCceeec---CCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHH
Confidence 22345555443 44577899999999999999999999965332211 1122222222223333 23467899999
Q ss_pred HHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 273 IRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 273 i~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
|.+||.. ||++||+++++++||||..
T Consensus 233 i~~~l~~-~P~~Rp~~~eil~~~~~~~ 258 (279)
T cd06619 233 ITQCMRK-QPKERPAPENLMDHPFIVQ 258 (279)
T ss_pred HHHHhhC-ChhhCCCHHHHhcCccccc
Confidence 9999999 9999999999999999964
No 144
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.7e-41 Score=306.19 Aligned_cols=234 Identities=21% Similarity=0.279 Sum_probs=180.1
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEecc
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYM 135 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~ 135 (300)
...|.+.+.||+|+||.||+|.+..+++.||+|... .....+|+.++++++|+||+++++++... +..|+|||++
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~----~~~~~~E~~iL~~L~HpnIv~l~~~~~~~-~~~~lv~e~~ 242 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW----YASSVHEARLLRRLSHPAVLALLDVRVVG-GLTCLVLPKY 242 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc----ccCHHHHHHHHHHCCCCCCCcEEEEEEEC-CEEEEEEEcc
Confidence 347999999999999999999999999999999643 22356899999999999999999988765 4899999999
Q ss_pred CCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcc-------------------
Q 040812 136 DAGSLEIYVKSR-GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG------------------- 195 (300)
Q Consensus 136 ~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~------------------- 195 (300)
. ++|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++...+.
T Consensus 243 ~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 321 (461)
T PHA03211 243 R-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYG 321 (461)
T ss_pred C-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccccccc
Confidence 6 5888888653 469999999999999999999999999999999999999876543222
Q ss_pred --ceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCC-------chHHHHHHHHhhC---C------
Q 040812 196 --YSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQE-------PDFLSLMLAICFR---E------ 257 (300)
Q Consensus 196 --~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~-------~~~~~~~~~~~~~---~------ 257 (300)
++..|.+||... +..++.++|||||||++|||++|..|+...... .....++...... .
T Consensus 322 ~~GT~~Y~APE~~~---~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~ 398 (461)
T PHA03211 322 IAGTVDTNAPEVLA---GDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGS 398 (461)
T ss_pred cCCCcCCcCHHHHc---CCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcch
Confidence 223344555442 456788999999999999999988766433211 1111121111000 0
Q ss_pred --------------CCCC----C---CCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 258 --------------PPSL----P---ECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 258 --------------~~~~----~---~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
.+.. + ...+..+.+||.+||+. ||++|||+.|+|+||||+.
T Consensus 399 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~-DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 399 RLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTF-DGARRPSAAELLRLPLFQS 460 (461)
T ss_pred HHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHccc-ChhhCcCHHHHhhCcccCC
Confidence 0000 0 12356789999999999 9999999999999999975
No 145
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=4.4e-42 Score=298.48 Aligned_cols=232 Identities=25% Similarity=0.376 Sum_probs=171.7
Q ss_pred eeeecCCcceEEEEEEEc--cCCeEEEEEEeecCCCCCCCHHHHHHHHhcCCCceeEeceeeeCC-CCcEEEEEeccCCC
Q 040812 62 LQVLGQGNGGTVFKVRHK--QTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQIFTKP-SGEVSILMEYMDAG 138 (300)
Q Consensus 62 ~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~~lv~e~~~~~ 138 (300)
.++||+|+||.||+|+++ .+++.||+|.+..........+|+.++++++||||+++++++... ....|+||||+.+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~- 84 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH- 84 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC-
Confidence 467999999999999975 467899999987655444567899999999999999999988543 3368999999965
Q ss_pred CHHHHHHhC---------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCC----CCCC---cc-------
Q 040812 139 SLEIYVKSR---------GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEK----MEHP---CG------- 195 (300)
Q Consensus 139 ~L~~~l~~~---------~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~----~~~~---~~------- 195 (300)
+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.. +..+ +|
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~ 164 (317)
T cd07868 85 DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 164 (317)
T ss_pred CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCC
Confidence 888877532 248999999999999999999999999999999999999432 2221 11
Q ss_pred ------------ceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCc--------hHHHHHHHHhh
Q 040812 196 ------------YSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEP--------DFLSLMLAICF 255 (300)
Q Consensus 196 ------------~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~--------~~~~~~~~~~~ 255 (300)
++..|.+||.... ...++.++|||||||++|||+||++||....... .....+.....
T Consensus 165 ~~~~~~~~~~~~~t~~y~aPE~~~~--~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (317)
T cd07868 165 PLKPLADLDPVVVTFWYRAPELLLG--ARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMG 242 (317)
T ss_pred CCccccccCCccccccccCCHHHcC--CCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcC
Confidence 1233566665431 2346789999999999999999999996433211 00000000000
Q ss_pred -----------CCC-------------C----------CCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 256 -----------REP-------------P----------SLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 256 -----------~~~-------------~----------~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
..+ . ......+..+.++|.+||+. ||++|||++|+++||||
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~-dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 243 FPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTM-DPIKRITSEQAMQDPYF 317 (317)
T ss_pred CCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhcc-CcccCCCHHHHhcCCCC
Confidence 000 0 00112345688999999999 99999999999999998
No 146
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=6.2e-43 Score=305.51 Aligned_cols=226 Identities=31% Similarity=0.485 Sum_probs=179.5
Q ss_pred ecCCcceEEEEEEEccCCeEEEEEEeecCCCCC-----CCHHHHHHHHhc---CCCceeEeceeeeCCCCcEEEEEeccC
Q 040812 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP-----PNPQELNILRQT---NSPYIVKCHQIFTKPSGEVSILMEYMD 136 (300)
Q Consensus 65 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~~lv~e~~~ 136 (300)
||+|+||.||+|++..+++.||+|++....... ....|..++... .||||+.+++++.... ..|+||||++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~-~~~lv~e~~~ 79 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDS-DLYLVTDYMS 79 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCC-eEEEEEcCCC
Confidence 799999999999999999999999986432211 123466666655 6999999999988765 8999999999
Q ss_pred CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcc-------------------ce
Q 040812 137 AGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG-------------------YS 197 (300)
Q Consensus 137 ~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~-------------------~~ 197 (300)
+|+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++...+. ++
T Consensus 80 ~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt 159 (330)
T cd05586 80 GGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGT 159 (330)
T ss_pred CChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCccCC
Confidence 99999999888889999999999999999999999999999999999999877543222 22
Q ss_pred eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCC-CCCChHHHHHHHHH
Q 040812 198 CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLP-ECSSEKFRDFIRCC 276 (300)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~~ 276 (300)
..|.+||.... ...++.++|||||||++|+|+||..||...... .....+.... ..++ ...+++++++|.+|
T Consensus 160 ~~y~aPE~~~~--~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~----~~~~~i~~~~-~~~~~~~~~~~~~~li~~~ 232 (330)
T cd05586 160 TEYLAPEVLLD--EKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQ----QMYRNIAFGK-VRFPKNVLSDEGRQFVKGL 232 (330)
T ss_pred ccccCHHHHcC--CCCCCCccceeccccEEEEeccCCCCCCCCCHH----HHHHHHHcCC-CCCCCccCCHHHHHHHHHH
Confidence 34566665431 223677999999999999999999999654322 2222222222 2233 34789999999999
Q ss_pred hccCCCCCCC----CHHHHhcCCCCCC
Q 040812 277 LQKGDPSKRW----TASQLLSHPFLAD 299 (300)
Q Consensus 277 l~~~dp~~Rp----t~~~~l~hpw~~~ 299 (300)
|.. ||++|| +++++++||||.+
T Consensus 233 L~~-~P~~R~~~~~~~~~ll~h~~~~~ 258 (330)
T cd05586 233 LNR-NPQHRLGAHRDAVELKEHPFFAD 258 (330)
T ss_pred cCC-CHHHCCCCCCCHHHHhcCccccC
Confidence 999 999998 7999999999975
No 147
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=9.1e-42 Score=288.47 Aligned_cols=238 Identities=51% Similarity=0.856 Sum_probs=197.5
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCC---CCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG---TPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
++|++.+.||+|++|.||+|.+..+++.|++|.+..... ...+.+|+..+.+++|+||+++++++.... ..++|||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~lv~e 79 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEG-EISIVLE 79 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCC-eEEEEEE
Confidence 368899999999999999999999999999999876543 234567999999999999999999988764 8999999
Q ss_pred ccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCceeecCCCCCCccc----------------
Q 040812 134 YMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHS-RNIVHRDIKPANVLINEKMEHPCGY---------------- 196 (300)
Q Consensus 134 ~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~-~~i~H~Dlkp~Nill~~~~~~~~~~---------------- 196 (300)
|+++++|.+++.....+++..+..++.|++.||.|||+ .|++|+||+|+||+++.++...+..
T Consensus 80 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~ 159 (264)
T cd06623 80 YMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNT 159 (264)
T ss_pred ecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCcccc
Confidence 99999999999887789999999999999999999999 9999999999999998876533221
Q ss_pred ---eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCC-CChHHHHH
Q 040812 197 ---SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPEC-SSEKFRDF 272 (300)
Q Consensus 197 ---~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~l 272 (300)
...|.+||... +..++.++|+||||+++|+|+||..||..... .........+.....+..+.. .++.+.++
T Consensus 160 ~~~~~~y~~pE~~~---~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 235 (264)
T cd06623 160 FVGTVTYMSPERIQ---GESYSYAADIWSLGLTLLECALGKFPFLPPGQ-PSFFELMQAICDGPPPSLPAEEFSPEFRDF 235 (264)
T ss_pred eeecccccCHhhhC---CCCCCchhhHHHHHHHHHHHHhCCCCCccccc-cCHHHHHHHHhcCCCCCCCcccCCHHHHHH
Confidence 22344454432 34567799999999999999999999976543 233344444444555556666 88999999
Q ss_pred HHHHhccCCCCCCCCHHHHhcCCCCCCC
Q 040812 273 IRCCLQKGDPSKRWTASQLLSHPFLADA 300 (300)
Q Consensus 273 i~~~l~~~dp~~Rpt~~~~l~hpw~~~~ 300 (300)
|.+||.. +|++||++.++++||||+++
T Consensus 236 i~~~l~~-~p~~R~~~~~ll~~~~~~~~ 262 (264)
T cd06623 236 ISACLQK-DPKKRPSAAELLQHPFIKKA 262 (264)
T ss_pred HHHHccC-ChhhCCCHHHHHhCHHHHhc
Confidence 9999999 99999999999999999763
No 148
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=4e-42 Score=313.86 Aligned_cols=233 Identities=24% Similarity=0.295 Sum_probs=189.7
Q ss_pred CcceeeeeecCCcceEEEEEEEccC-CeEEEEEEeecCCCC--CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQT-LALYALKVMQCDRGT--PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vaiK~~~~~~~~--~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
..|.+.+.||+|+||.||+|....+ ++.||+|.+...... ..+.+|+.+++.++||||+++++++.... ..|+|||
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~-~~~lv~E 145 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDD-KLLLIME 145 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECC-EEEEEEE
Confidence 4599999999999999999998877 788999976443221 12356999999999999999999998764 8999999
Q ss_pred ccCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcc--------------
Q 040812 134 YMDAGSLEIYVKS----RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG-------------- 195 (300)
Q Consensus 134 ~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~-------------- 195 (300)
|+++|+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.++...+.
T Consensus 146 ~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~ 225 (478)
T PTZ00267 146 YGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSL 225 (478)
T ss_pred CCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcccc
Confidence 9999999988754 3468999999999999999999999999999999999999977654322
Q ss_pred -------ceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChH
Q 040812 196 -------YSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEK 268 (300)
Q Consensus 196 -------~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (300)
++..|.+||... +..++.++|||||||++|||+||+.||..... ...+..+........+..++.+
T Consensus 226 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~----~~~~~~~~~~~~~~~~~~~s~~ 298 (478)
T PTZ00267 226 DVASSFCGTPYYLAPELWE---RKRYSKKADMWSLGVILYELLTLHRPFKGPSQ----REIMQQVLYGKYDPFPCPVSSG 298 (478)
T ss_pred ccccccCCCccccCHhHhC---CCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHhCCCCCCCccCCHH
Confidence 223355555443 45578899999999999999999999965432 2333333334444566778899
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHhcCCCCC
Q 040812 269 FRDFIRCCLQKGDPSKRWTASQLLSHPFLA 298 (300)
Q Consensus 269 l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~ 298 (300)
+.++|.+||.. ||++||++++++.|+|++
T Consensus 299 ~~~li~~~L~~-dP~~Rps~~~~l~~~~~~ 327 (478)
T PTZ00267 299 MKALLDPLLSK-NPALRPTTQQLLHTEFLK 327 (478)
T ss_pred HHHHHHHHhcc-ChhhCcCHHHHHhCHHHH
Confidence 99999999999 999999999999999985
No 149
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=5.6e-42 Score=290.12 Aligned_cols=238 Identities=38% Similarity=0.642 Sum_probs=195.0
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
++|+..+.||+|+||.||++.++.+++.+|+|.+...... ..+.+|+.++++++||||+++++.+.... ..++|+|
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-~~~lv~e 79 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNG-DISICME 79 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCC-EEEEEEE
Confidence 3678889999999999999999999999999998765332 23467999999999999999999988764 8999999
Q ss_pred ccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCceeecCCCCCCccc---------------
Q 040812 134 YMDAGSLEIYVKSR-GRLSEDIICTISRQVLKGLFYMHS-RNIVHRDIKPANVLINEKMEHPCGY--------------- 196 (300)
Q Consensus 134 ~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~lH~-~~i~H~Dlkp~Nill~~~~~~~~~~--------------- 196 (300)
|+++++|.+++... ..+++..+..++.|++.||.|||+ .|++|+||||+||+++.++...+..
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~ 159 (265)
T cd06605 80 YMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTF 159 (265)
T ss_pred ecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhcc
Confidence 99999999999875 679999999999999999999999 9999999999999999876543322
Q ss_pred --eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-CchHHHHHHHHhhCCCCCCCCC-CChHHHHH
Q 040812 197 --SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQ-EPDFLSLMLAICFREPPSLPEC-SSEKFRDF 272 (300)
Q Consensus 197 --~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~l 272 (300)
...|.+||... +..++.++|||||||++|+|++|..||..... .......+........+..+.. .++++.++
T Consensus 160 ~~~~~y~~PE~~~---~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 236 (265)
T cd06605 160 VGTSSYMAPERIQ---GNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDF 236 (265)
T ss_pred cCChhccCHHHHc---CCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHH
Confidence 22345555443 44677899999999999999999999965432 1223334444444555555554 78899999
Q ss_pred HHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 273 IRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 273 i~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
|.+||.. ||++|||+.++++||||+.
T Consensus 237 i~~~l~~-~p~~Rpt~~~ll~~~~~~~ 262 (265)
T cd06605 237 VNLCLIK-DPRERPSYKELLEHPFIKK 262 (265)
T ss_pred HHHHcCC-CchhCcCHHHHhhCchhhc
Confidence 9999999 9999999999999999974
No 150
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=2e-42 Score=303.86 Aligned_cols=239 Identities=26% Similarity=0.358 Sum_probs=183.2
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC----CCCHHHHHHHHhcCCCceeEeceeeeCCC-----C
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT----PPNPQELNILRQTNSPYIVKCHQIFTKPS-----G 126 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~ 126 (300)
.++|++++.||+|+||.||+|.+..+++.||+|.+...... ..+.+|+.++++++|+||+++++++.... .
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFN 93 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccC
Confidence 46799999999999999999999999999999998653221 12357999999999999999999875432 2
Q ss_pred cEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc----------
Q 040812 127 EVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY---------- 196 (300)
Q Consensus 127 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~---------- 196 (300)
..|++++++ +++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+||+++.++...+.+
T Consensus 94 ~~~~~~~~~-~~~l~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 171 (343)
T cd07878 94 EVYLVTNLM-GADLNNIVKC-QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADDE 171 (343)
T ss_pred cEEEEeecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecCCC
Confidence 478999998 6699887764 4699999999999999999999999999999999999999876543322
Q ss_pred ------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhh---------------
Q 040812 197 ------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICF--------------- 255 (300)
Q Consensus 197 ------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~--------------- 255 (300)
+..|.+||.... ...++.++|||||||++|+|++|..||...+.......+......
T Consensus 172 ~~~~~~t~~y~aPE~~~~--~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (343)
T cd07878 172 MTGYVATRWYRAPEIMLN--WMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHAR 249 (343)
T ss_pred cCCccccccccCchHhcC--CccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHH
Confidence 334566665431 235678999999999999999999999654322111111110000
Q ss_pred ---CCCCCC--------CCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 256 ---REPPSL--------PECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 256 ---~~~~~~--------~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
...+.. ....++.+.+||.+||.. ||++|||+.++++||||..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~-dp~~R~s~~ell~hp~~~~ 303 (343)
T cd07878 250 KYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVL-DSDKRISASEALAHPYFSQ 303 (343)
T ss_pred HHhhccccccchhHHHhccCCCHHHHHHHHHHcCC-ChhhCCCHHHHhcCcchhc
Confidence 000001 123466789999999999 9999999999999999964
No 151
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=5e-42 Score=289.44 Aligned_cols=233 Identities=27% Similarity=0.374 Sum_probs=191.1
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEE
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILM 132 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~ 132 (300)
+|++.+.||.|+||.||+|.+..+++.||+|++...... ..+.+|+.++++++||||+++++.+.... ..|+|+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~ 79 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEE-NMYLVV 79 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCC-eEEEEE
Confidence 589999999999999999999999999999998754322 23467999999999999999999987654 899999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce---------------
Q 040812 133 EYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS--------------- 197 (300)
Q Consensus 133 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~--------------- 197 (300)
||+.+++|.+++.....+++..+..++.||+.||.|||++|++|+||+|+||++++++...+.++
T Consensus 80 e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~ 159 (258)
T cd05578 80 DLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTST 159 (258)
T ss_pred eCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCcccccc
Confidence 99999999999987778999999999999999999999999999999999999998765433221
Q ss_pred ---eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHH
Q 040812 198 ---CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIR 274 (300)
Q Consensus 198 ---~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 274 (300)
..|.+||... +...+.++|+||||+++|+|++|..||...... ...... ..........+...+..+.++|.
T Consensus 160 ~~~~~y~~PE~~~---~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~ 234 (258)
T cd05578 160 SGTPGYMAPEVLC---RQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT-IRDQIR-AKQETADVLYPATWSTEAIDAIN 234 (258)
T ss_pred CCChhhcCHHHHc---ccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc-HHHHHH-HHhccccccCcccCcHHHHHHHH
Confidence 1233444332 334677999999999999999999999765432 111222 22222455667778899999999
Q ss_pred HHhccCCCCCCCCH--HHHhcCCCC
Q 040812 275 CCLQKGDPSKRWTA--SQLLSHPFL 297 (300)
Q Consensus 275 ~~l~~~dp~~Rpt~--~~~l~hpw~ 297 (300)
+||.. ||.+||++ .|+++||||
T Consensus 235 ~~l~~-~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 235 KLLER-DPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred HHccC-ChhHcCCccHHHHhcCCCC
Confidence 99999 99999999 999999998
No 152
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=7.6e-42 Score=292.15 Aligned_cols=237 Identities=29% Similarity=0.449 Sum_probs=188.3
Q ss_pred ceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCC--CCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEeccC
Q 040812 59 LEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG--TPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMD 136 (300)
Q Consensus 59 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~ 136 (300)
|++.+.||+|+||.||++.+..++..+++|.+..... ...+.+|+.+++.++|+||+++++++.... ..|+||||++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~-~~~~v~e~~~ 85 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN-NLWILIEFCA 85 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCC-EEEEEEEecC
Confidence 6888999999999999999999999999999864332 123467999999999999999999988754 8999999999
Q ss_pred CCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-------------------
Q 040812 137 AGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY------------------- 196 (300)
Q Consensus 137 ~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~------------------- 196 (300)
+++|..++.. ...+++..+..++.|++.||.|||+.|++||||||+||+++.++...+.+
T Consensus 86 ~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 165 (282)
T cd06643 86 GGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIG 165 (282)
T ss_pred CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEccccccccccccccccccccc
Confidence 9999988764 45689999999999999999999999999999999999998776543322
Q ss_pred eeeccccccccc--cCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHH
Q 040812 197 SCLYESGEARHR--KHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIR 274 (300)
Q Consensus 197 ~~~~~~~~~~~~--~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 274 (300)
+..|.+||.... ..+..++.++|||||||++|||++|..||.............. ........+..++..+.++|.
T Consensus 166 ~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~ 243 (282)
T cd06643 166 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAK--SEPPTLAQPSRWSSEFKDFLK 243 (282)
T ss_pred cccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhh--cCCCCCCCccccCHHHHHHHH
Confidence 223556665421 1234567799999999999999999999965433221111111 111122345567889999999
Q ss_pred HHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 275 CCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 275 ~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
+||.. ||++||+++++++||||..
T Consensus 244 ~~l~~-~p~~Rp~~~~il~~~~~~~ 267 (282)
T cd06643 244 KCLEK-NVDARWTTTQLLQHPFVTV 267 (282)
T ss_pred HHccC-ChhhCcCHHHHhcCCCEec
Confidence 99999 9999999999999999974
No 153
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=2.1e-41 Score=285.22 Aligned_cols=231 Identities=23% Similarity=0.362 Sum_probs=189.9
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
+|++.+.||+|+||.||++.+..+++.||+|.+...... ..+.+|+.++++++|+||+++++++.... ..|+|||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~lv~e 79 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENG-NLYIVMD 79 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCC-eEEEEEe
Confidence 589999999999999999999999999999998653322 23467999999999999999999987654 8999999
Q ss_pred ccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce--------------
Q 040812 134 YMDAGSLEIYVKSR--GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS-------------- 197 (300)
Q Consensus 134 ~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~-------------- 197 (300)
|+.+++|.+++... ..+++..+..++.|++.||.|||++|++|+||+|+||+++.++...+.++
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~ 159 (256)
T cd08218 80 YCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELAR 159 (256)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhh
Confidence 99999999998753 25789999999999999999999999999999999999987655433221
Q ss_pred -----eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHH
Q 040812 198 -----CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDF 272 (300)
Q Consensus 198 -----~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 272 (300)
..|.+||... +...+.++|+|||||++|+|+||..||..... .........+..+..+...+.++.++
T Consensus 160 ~~~~~~~~~~pe~~~---~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l 232 (256)
T cd08218 160 TCIGTPYYLSPEICE---NRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM----KNLVLKIIRGSYPPVSSHYSYDLRNL 232 (256)
T ss_pred hccCCccccCHHHhC---CCCCCCccchhHHHHHHHHHHcCCCCccCCCH----HHHHHHHhcCCCCCCcccCCHHHHHH
Confidence 2244444432 44567799999999999999999999965332 23333334455555677789999999
Q ss_pred HHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 273 IRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 273 i~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
|.+||.. +|++||++.++++||||
T Consensus 233 i~~~l~~-~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 233 VSQLFKR-NPRDRPSVNSILEKNFI 256 (256)
T ss_pred HHHHhhC-ChhhCcCHHHHhhCcCC
Confidence 9999999 99999999999999998
No 154
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.7e-41 Score=287.25 Aligned_cols=233 Identities=35% Similarity=0.513 Sum_probs=186.6
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
++|++.+.||.|+||.||+|.+..++..+|+|++...... ....+|+..++.++|+||+++++.+.... ..|+|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~iv~e 79 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGD-ELWLVMP 79 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCC-EEEEEEe
Confidence 4689999999999999999999989999999998654332 23467999999999999999999887755 8999999
Q ss_pred ccCCCCHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc--------------
Q 040812 134 YMDAGSLEIYVKSR---GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY-------------- 196 (300)
Q Consensus 134 ~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~-------------- 196 (300)
++++++|.+++... ..+++..+..++.|++.||.|||+.|++|+||||+||++++++...+..
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~ 159 (267)
T cd06610 80 YLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRT 159 (267)
T ss_pred ccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcccc
Confidence 99999999999763 4589999999999999999999999999999999999999875432221
Q ss_pred ---------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCC-----
Q 040812 197 ---------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLP----- 262 (300)
Q Consensus 197 ---------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~----- 262 (300)
+..|.+||.... ....+.++|+|||||++|+|++|+.||............. ....+..+
T Consensus 160 ~~~~~~~~~~~~y~~Pe~~~~--~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 233 (267)
T cd06610 160 RKVRKTFVGTPCWMAPEVMEQ--VHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTL----QNDPPSLETGADY 233 (267)
T ss_pred ccccccccCChhhcChHHHcc--ccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHh----cCCCCCcCCcccc
Confidence 122444544332 1256779999999999999999999997654432222222 22222222
Q ss_pred CCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 263 ECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 263 ~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
...++.+.+++.+||.. ||++||+++++++||||
T Consensus 234 ~~~~~~~~~li~~~l~~-~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 234 KKYSKSFRKMISLCLQK-DPSKRPTAEELLKHKFF 267 (267)
T ss_pred ccccHHHHHHHHHHcCC-ChhhCcCHHHHhhCCCC
Confidence 24678899999999999 99999999999999998
No 155
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.3e-41 Score=322.28 Aligned_cols=240 Identities=27% Similarity=0.419 Sum_probs=188.3
Q ss_pred CCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC----CCCHHHHHHHHhcCCCceeEeceeeeCC-CCcE
Q 040812 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT----PPNPQELNILRQTNSPYIVKCHQIFTKP-SGEV 128 (300)
Q Consensus 54 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~ 128 (300)
..+++|++++.||+|+||.||+|.+..+++.||+|++...... ..+..|+.++++++||||++++++|... ...+
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l 89 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL 89 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence 3467899999999999999999999999999999998754322 2345799999999999999999987543 3468
Q ss_pred EEEEeccCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHhHhC-------CccccCCCCCceeecCCCC------
Q 040812 129 SILMEYMDAGSLEIYVKS----RGRLSEDIICTISRQVLKGLFYMHSR-------NIVHRDIKPANVLINEKME------ 191 (300)
Q Consensus 129 ~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~lH~~-------~i~H~Dlkp~Nill~~~~~------ 191 (300)
||||||+++++|.+++.. .+.+++..++.|+.||+.||.|||.. +|+||||||+||||+....
T Consensus 90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~ 169 (1021)
T PTZ00266 90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT 169 (1021)
T ss_pred EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence 999999999999999875 24699999999999999999999984 4999999999999964211
Q ss_pred --------------CCcc---------------ceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Q 040812 192 --------------HPCG---------------YSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQ 242 (300)
Q Consensus 192 --------------~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~ 242 (300)
.++| ++..|.+||..... ...++.++||||||||+|||+||..||.....
T Consensus 170 ~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge-~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~ 248 (1021)
T PTZ00266 170 AQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHE-TKSYDDKSDMWALGCIIYELCSGKTPFHKANN 248 (1021)
T ss_pred ccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhcc-CCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc
Confidence 1122 23446666654321 23467899999999999999999999965433
Q ss_pred CchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 243 EPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
.. ..+..+. ..+.......+.++.+||..||.. +|.+||++.++|.||||.+
T Consensus 249 ~~---qli~~lk-~~p~lpi~~~S~eL~dLI~~~L~~-dPeeRPSa~QlL~h~~ik~ 300 (1021)
T PTZ00266 249 FS---QLISELK-RGPDLPIKGKSKELNILIKNLLNL-SAKERPSALQCLGYQIIKN 300 (1021)
T ss_pred HH---HHHHHHh-cCCCCCcCCCCHHHHHHHHHHhcC-ChhHCcCHHHHhccHHHhh
Confidence 22 2222222 112222234688999999999999 9999999999999999964
No 156
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=2.6e-41 Score=285.74 Aligned_cols=235 Identities=33% Similarity=0.523 Sum_probs=190.2
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
+|++.+.||+|+||.||+|.+..+++.||+|.++..... ..+.+|+.++++++|+||+++++.+.... ..++|+|
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~-~~~lv~e 79 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHRE-KVYIFME 79 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCC-EEEEEEe
Confidence 588999999999999999999988999999998765443 23357999999999999999999877654 8999999
Q ss_pred ccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-----------------
Q 040812 134 YMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY----------------- 196 (300)
Q Consensus 134 ~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~----------------- 196 (300)
|+++++|.+++.....+++..+..++.|++.||.|||+.|++|+||+|+||+++.++...+..
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~ 159 (264)
T cd06626 80 YCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEE 159 (264)
T ss_pred cCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCccccc
Confidence 999999999998877789999999999999999999999999999999999999865443222
Q ss_pred ------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCC--ChH
Q 040812 197 ------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS--SEK 268 (300)
Q Consensus 197 ------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 268 (300)
...|.+||..........+.++||||||+++|+|++|..||....... ...........+.+|... ++.
T Consensus 160 ~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 236 (264)
T cd06626 160 VQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF---QIMFHVGAGHKPPIPDSLQLSPE 236 (264)
T ss_pred ccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH---HHHHHHhcCCCCCCCcccccCHH
Confidence 123445555432222236779999999999999999999996543221 222223334444555544 889
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 269 FRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 269 l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
+.++|.+||+. ||++|||+.++++|||+
T Consensus 237 ~~~li~~~l~~-~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 237 GKDFLDRCLES-DPKKRPTASELLQHPFV 264 (264)
T ss_pred HHHHHHHHccC-CcccCCCHHHHhcCCCC
Confidence 99999999999 99999999999999997
No 157
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=2.8e-41 Score=288.32 Aligned_cols=230 Identities=26% Similarity=0.416 Sum_probs=182.0
Q ss_pred eecCCcceEEEEEEEccCCeEEEEEEeecCCCCCC-----CHHHHHHHH---hcCCCceeEeceeeeCCCCcEEEEEecc
Q 040812 64 VLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPP-----NPQELNILR---QTNSPYIVKCHQIFTKPSGEVSILMEYM 135 (300)
Q Consensus 64 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-----~~~E~~~l~---~l~h~niv~~~~~~~~~~~~~~lv~e~~ 135 (300)
.||+|+||.||++.+..+++.+|+|.+........ ..+|..+++ ...|+||+.+++++...+ ..++||||+
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~lv~e~~ 79 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPD-KLCFILDLM 79 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCC-eEEEEEecC
Confidence 48999999999999999999999999875443221 123433333 347999999999988754 899999999
Q ss_pred CCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-----------------ee
Q 040812 136 DAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY-----------------SC 198 (300)
Q Consensus 136 ~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~-----------------~~ 198 (300)
++++|.+++...+.+++..+..++.|++.||.|||++|++||||||+||+++.++...+.+ +.
T Consensus 80 ~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 159 (279)
T cd05633 80 NGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTH 159 (279)
T ss_pred CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCCCc
Confidence 9999999998888899999999999999999999999999999999999998775533222 22
Q ss_pred eccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHhc
Q 040812 199 LYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQ 278 (300)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 278 (300)
.|.+||... .+..++.++|||||||++|+|+||..||........ .............++...++++.++|.+||.
T Consensus 160 ~y~aPE~~~--~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 235 (279)
T cd05633 160 GYMAPEVLQ--KGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRMTLTVNVELPDSFSPELKSLLEGLLQ 235 (279)
T ss_pred CccCHHHhc--CCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH--HHHHHHhhcCCcCCccccCHHHHHHHHHHhc
Confidence 345555432 134467799999999999999999999975433211 2222223344556777889999999999999
Q ss_pred cCCCCCCC-----CHHHHhcCCCCCC
Q 040812 279 KGDPSKRW-----TASQLLSHPFLAD 299 (300)
Q Consensus 279 ~~dp~~Rp-----t~~~~l~hpw~~~ 299 (300)
. ||++|+ +++++++||||++
T Consensus 236 ~-~p~~R~~~~~~~~~~~~~h~~~~~ 260 (279)
T cd05633 236 R-DVSKRLGCLGRGAQEVKEHVFFKG 260 (279)
T ss_pred C-CHHHhcCCCCCCHHHHHhCccccC
Confidence 9 999999 6999999999986
No 158
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-43 Score=307.21 Aligned_cols=239 Identities=28% Similarity=0.410 Sum_probs=206.5
Q ss_pred cCCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhcCCCceeEeceeeeCCCCc
Q 040812 53 IDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTNSPYIVKCHQIFTKPSGE 127 (300)
Q Consensus 53 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 127 (300)
.++-..|+.++.||.|+||.||-|++..+.+.||||.+.-.... .+...|+..|++++|||++.+-++|..+. .
T Consensus 22 ~DPEklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~-T 100 (948)
T KOG0577|consen 22 DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREH-T 100 (948)
T ss_pred CCHHHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccc-h
Confidence 34445688899999999999999999999999999987532211 23367999999999999999999999876 7
Q ss_pred EEEEEeccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCC-------------
Q 040812 128 VSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHP------------- 193 (300)
Q Consensus 128 ~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~------------- 193 (300)
.|+|||||-| +-.+++.- +.++-+.++..|+.+.+.||.|||+.+.||||||+.|||+++.+..+
T Consensus 101 aWLVMEYClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA 179 (948)
T KOG0577|consen 101 AWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA 179 (948)
T ss_pred HHHHHHHHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCch
Confidence 9999999965 88888864 44789999999999999999999999999999999999999876653
Q ss_pred --ccceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCC-CCChHHH
Q 040812 194 --CGYSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPE-CSSEKFR 270 (300)
Q Consensus 194 --~~~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~ 270 (300)
+.++..|++||.......|.|+-++||||||+++.||..+++|+++. +.+..+..+..+..|.++. .+++.++
T Consensus 180 nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnM----NAMSALYHIAQNesPtLqs~eWS~~F~ 255 (948)
T KOG0577|consen 180 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM----NAMSALYHIAQNESPTLQSNEWSDYFR 255 (948)
T ss_pred hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCc----hHHHHHHHHHhcCCCCCCCchhHHHHH
Confidence 34577799999888777788888999999999999999999999753 4457777788888888875 5899999
Q ss_pred HHHHHHhccCCCCCCCCHHHHhcCCCCC
Q 040812 271 DFIRCCLQKGDPSKRWTASQLLSHPFLA 298 (300)
Q Consensus 271 ~li~~~l~~~dp~~Rpt~~~~l~hpw~~ 298 (300)
.|+..||++ =|.+|||++++|+|+|+.
T Consensus 256 ~Fvd~CLqK-ipqeRptse~ll~H~fv~ 282 (948)
T KOG0577|consen 256 NFVDSCLQK-IPQERPTSEELLKHRFVL 282 (948)
T ss_pred HHHHHHHhh-CcccCCcHHHHhhcchhc
Confidence 999999999 999999999999999975
No 159
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1e-41 Score=302.58 Aligned_cols=234 Identities=23% Similarity=0.331 Sum_probs=184.0
Q ss_pred cCCCCcceeeeeecCCcceEEEEEEE-----ccCCeEEEEEEeecCCCC---CCCHHHHHHHHhc-CCCceeEeceeeeC
Q 040812 53 IDGLSQLEKLQVLGQGNGGTVFKVRH-----KQTLALYALKVMQCDRGT---PPNPQELNILRQT-NSPYIVKCHQIFTK 123 (300)
Q Consensus 53 ~~~~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l-~h~niv~~~~~~~~ 123 (300)
....++|++.+.||+|+||.||+|.+ ..++..||+|+++..... ..+.+|+.++..+ +||||+++++++..
T Consensus 31 ~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~ 110 (375)
T cd05104 31 EFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTV 110 (375)
T ss_pred ccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeecc
Confidence 34466899999999999999999974 345778999998754322 2346799999999 89999999999877
Q ss_pred CCCcEEEEEeccCCCCHHHHHHhCC-------------------------------------------------------
Q 040812 124 PSGEVSILMEYMDAGSLEIYVKSRG------------------------------------------------------- 148 (300)
Q Consensus 124 ~~~~~~lv~e~~~~~~L~~~l~~~~------------------------------------------------------- 148 (300)
.. ..++|||||++|+|.+++....
T Consensus 111 ~~-~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 189 (375)
T cd05104 111 GG-PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSV 189 (375)
T ss_pred CC-cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccc
Confidence 54 8999999999999999986421
Q ss_pred --------------------CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce-----------
Q 040812 149 --------------------RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS----------- 197 (300)
Q Consensus 149 --------------------~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~----------- 197 (300)
.+++..+..++.||+.||.|||++|++||||||+|||++.+...+++++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 269 (375)
T cd05104 190 RSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSN 269 (375)
T ss_pred ccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCccc
Confidence 3678889999999999999999999999999999999987654322211
Q ss_pred ----------eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCC
Q 040812 198 ----------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSS 266 (300)
Q Consensus 198 ----------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (300)
..|.+||... +..++.++|||||||++|||+| |..||............+ ........+...+
T Consensus 270 ~~~~~~~~~~~~y~aPE~~~---~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 343 (375)
T cd05104 270 YVVKGNARLPVKWMAPESIF---NCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMI---KEGYRMLSPECAP 343 (375)
T ss_pred ccccCCCCCCcceeChhHhc---CCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHH---HhCccCCCCCCCC
Confidence 1255555543 4567889999999999999998 899996644333332222 2233444556678
Q ss_pred hHHHHHHHHHhccCCCCCCCCHHHHhcC
Q 040812 267 EKFRDFIRCCLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 267 ~~l~~li~~~l~~~dp~~Rpt~~~~l~h 294 (300)
.++.++|.+||.. ||++|||+.++++.
T Consensus 344 ~~l~~li~~cl~~-dP~~RPs~~eil~~ 370 (375)
T cd05104 344 SEMYDIMKSCWDA-DPLKRPTFKQIVQL 370 (375)
T ss_pred HHHHHHHHHHccC-ChhHCcCHHHHHHH
Confidence 8999999999999 99999999999864
No 160
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=4.2e-41 Score=288.78 Aligned_cols=238 Identities=27% Similarity=0.401 Sum_probs=183.2
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEE
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv 131 (300)
.+++|++.+.||+|+||.||+|.++.+++.||+|.+...... ..+.+|+.++++++|+||+++++++.... ..|+|
T Consensus 3 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~~lv 81 (291)
T cd07844 3 KLETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKK-TLTLV 81 (291)
T ss_pred CccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCC-eEEEE
Confidence 357899999999999999999999989999999998654322 23467999999999999999999988754 89999
Q ss_pred EeccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcccee------------
Q 040812 132 MEYMDAGSLEIYVKSR-GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSC------------ 198 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~------------ 198 (300)
|||+.+ +|.+++... ..+++..++.++.|++.||.|||+.|++||||||+||+++.++...+.+++
T Consensus 82 ~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 160 (291)
T cd07844 82 FEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTY 160 (291)
T ss_pred EecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCccc
Confidence 999985 899988754 468999999999999999999999999999999999999987654433222
Q ss_pred -------eccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCC--------------
Q 040812 199 -------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFRE-------------- 257 (300)
Q Consensus 199 -------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~-------------- 257 (300)
.|.+||.... ...++.++|||||||++|+|++|+.||............+.......
T Consensus 161 ~~~~~~~~~~aPE~~~~--~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (291)
T cd07844 161 SNEVVTLWYRPPDVLLG--STEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEF 238 (291)
T ss_pred cccccccccCCcHHhhc--CcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccc
Confidence 2344443321 23356799999999999999999999965442222111111100000
Q ss_pred ---------CCC---CCCCCC--hHHHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 258 ---------PPS---LPECSS--EKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 258 ---------~~~---~~~~~~--~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
... .....+ ..+.+++.+||.. ||++|||+.++++||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~-~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 239 KPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQY-EPKKRISAAEAMKHPYF 291 (291)
T ss_pred ccccccccCChhHHHhCcCCCCchhHHHHHHHHhcc-CcccccCHHHHhcCCCC
Confidence 000 001123 7789999999999 99999999999999998
No 161
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=2.5e-41 Score=292.20 Aligned_cols=234 Identities=26% Similarity=0.396 Sum_probs=188.1
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv 131 (300)
++|++.+.||+|+||.||++.+..+++.||+|.+...... ..+.+|+.+++.++||||+++++.+.... ..++|
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-~~~lv 79 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKR-HLCMV 79 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCC-EEEEE
Confidence 4689999999999999999999999999999998754321 12357999999999999999999988754 89999
Q ss_pred EeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce--------------
Q 040812 132 MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS-------------- 197 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~-------------- 197 (300)
|||++|++|.+++...+.+++..+..++.|++.||.|||+.|++||||||+||+++.++...+..+
T Consensus 80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (305)
T cd05609 80 MEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNL 159 (305)
T ss_pred EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccccc
Confidence 999999999999988888999999999999999999999999999999999999987755322211
Q ss_pred --------------------eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhC-
Q 040812 198 --------------------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFR- 256 (300)
Q Consensus 198 --------------------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~- 256 (300)
..|.+||... +..++.++|+|||||++|||+||..||.+.... +........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~----~~~~~~~~~~ 232 (305)
T cd05609 160 YEGHIEKDTREFLDKQVCGTPEYIAPEVIL---RQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE----ELFGQVISDD 232 (305)
T ss_pred cccccccchhhccccCCccCccccCchhcc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHhcc
Confidence 1244455432 345678999999999999999999999754322 222222111
Q ss_pred -CCCCCCCCCChHHHHHHHHHhccCCCCCCCC---HHHHhcCCCCCC
Q 040812 257 -EPPSLPECSSEKFRDFIRCCLQKGDPSKRWT---ASQLLSHPFLAD 299 (300)
Q Consensus 257 -~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt---~~~~l~hpw~~~ 299 (300)
..+......+..+.++|.+||.. ||++||+ +.++++||||..
T Consensus 233 ~~~~~~~~~~~~~~~~li~~~l~~-~P~~R~~~~~~~~ll~~~~~~~ 278 (305)
T cd05609 233 IEWPEGDEALPADAQDLISRLLRQ-NPLERLGTGGAFEVKQHRFFLG 278 (305)
T ss_pred cCCCCccccCCHHHHHHHHHHhcc-ChhhccCccCHHHHHhCccccC
Confidence 11222335788999999999999 9999998 789999999964
No 162
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.7e-41 Score=290.35 Aligned_cols=239 Identities=36% Similarity=0.593 Sum_probs=191.8
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEE
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILM 132 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~ 132 (300)
.++|++.+.||+|+||.||++.+..+++.||+|++...... ..+.+|+.+++.++||||+++++.+.... ..|+||
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~ 82 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNEN-NICMCM 82 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCC-EEEEEE
Confidence 46799999999999999999999999999999988654322 23467999999999999999999988764 899999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCceeecCCCCCCccce--------------
Q 040812 133 EYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHS-RNIVHRDIKPANVLINEKMEHPCGYS-------------- 197 (300)
Q Consensus 133 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~-~~i~H~Dlkp~Nill~~~~~~~~~~~-------------- 197 (300)
||+++++|.+++...+.+++..+..++.|++.||.|||+ .+++|+||||+||+++.++...+..+
T Consensus 83 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~~ 162 (284)
T cd06620 83 EFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADTF 162 (284)
T ss_pred ecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhccCcc
Confidence 999999999999887789999999999999999999997 69999999999999987755433222
Q ss_pred ---eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCC-------chHHHHHHHHhhCCCCCCCCC-CC
Q 040812 198 ---CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQE-------PDFLSLMLAICFREPPSLPEC-SS 266 (300)
Q Consensus 198 ---~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~-------~~~~~~~~~~~~~~~~~~~~~-~~ 266 (300)
..|.+||... ++.++.++|||||||++|+|+||..||...... ...............+.++.. .+
T Consensus 163 ~~~~~~~aPE~~~---~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd06620 163 VGTSTYMSPERIQ---GGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFP 239 (284)
T ss_pred ccCcccCCHHHHc---cCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcC
Confidence 2334444432 446677999999999999999999999754332 111222333333333444333 77
Q ss_pred hHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 267 EKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 267 ~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
.++.+++.+||.. ||++|||+.|+++|+||..
T Consensus 240 ~~~~~li~~~l~~-dp~~Rpt~~e~~~~~~~~~ 271 (284)
T cd06620 240 EDLRDFVDACLLK-DPTERPTPQQLCAMPPFIQ 271 (284)
T ss_pred HHHHHHHHHHhcC-CcccCcCHHHHhcCccccc
Confidence 8899999999999 9999999999999999854
No 163
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=2.4e-41 Score=284.97 Aligned_cols=233 Identities=33% Similarity=0.495 Sum_probs=188.5
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-------CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEE
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-------PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSI 130 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~l 130 (300)
+|+..+.||+|+||.||+|.+..+++.|++|.+...... ..+.+|+.+++.++|+||+++++++.... ..|+
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-~~~l 79 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREED-NLYI 79 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCC-eEEE
Confidence 477889999999999999999988999999998654321 23457999999999999999999887654 8999
Q ss_pred EEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc--------------
Q 040812 131 LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY-------------- 196 (300)
Q Consensus 131 v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~-------------- 196 (300)
|+||+++++|.+++.....+++..+..++.||+.||.|||+.|++|+||+|+||+++.++...+..
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~~ 159 (258)
T cd06632 80 FLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAK 159 (258)
T ss_pred EEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceecccccccc
Confidence 999999999999998877799999999999999999999999999999999999998775543322
Q ss_pred ----eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHH
Q 040812 197 ----SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDF 272 (300)
Q Consensus 197 ----~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 272 (300)
+..|.+||.... ...++.++|+|||||++|+|++|..||....... ...........+..+..+++.+.++
T Consensus 160 ~~~~~~~y~~pe~~~~--~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l 234 (258)
T cd06632 160 SFKGSPYWMAPEVIAQ--QGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVA---AVFKIGRSKELPPIPDHLSDEAKDF 234 (258)
T ss_pred ccCCCcceeCHHHhcC--CCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHH---HHHHHHhcccCCCcCCCcCHHHHHH
Confidence 222444444321 1136779999999999999999999996544211 1111112134455667788999999
Q ss_pred HHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 273 IRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 273 i~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
+.+||.. ||++||++.++++||||
T Consensus 235 i~~~l~~-~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 235 ILKCLQR-DPSLRPTAAELLEHPFV 258 (258)
T ss_pred HHHHhhc-CcccCcCHHHHhcCCCC
Confidence 9999999 99999999999999997
No 164
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=4.8e-41 Score=282.90 Aligned_cols=231 Identities=29% Similarity=0.422 Sum_probs=188.4
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC----CCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP----PNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
+|++.+.||+|+||.||++.+..+++.+|+|.+....... .+.+|+.++++++|+|++++++.+.... ..++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-~~~lv~e 79 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDK-ALMIVME 79 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCC-EEEEEEe
Confidence 5899999999999999999999999999999987543222 3457999999999999999999887654 8999999
Q ss_pred ccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCC-C---Ccc------------
Q 040812 134 YMDAGSLEIYVKSR--GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKME-H---PCG------------ 195 (300)
Q Consensus 134 ~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~-~---~~~------------ 195 (300)
|+++++|.+++... ..+++..+..++.|++.||.|||++|++|+||||+||+++.+.. . +++
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~ 159 (256)
T cd08220 80 YAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAY 159 (256)
T ss_pred cCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcccc
Confidence 99999999999763 34899999999999999999999999999999999999985432 1 111
Q ss_pred ---ceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHH
Q 040812 196 ---YSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDF 272 (300)
Q Consensus 196 ---~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 272 (300)
+...|.+||... +...+.++||||||+++|+|++|..||...+.. ..............+...+.++.++
T Consensus 160 ~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~l 232 (256)
T cd08220 160 TVVGTPCYISPELCE---GKPYNQKSDIWALGCVLYELASLKRAFEAANLP----ALVLKIMSGTFAPISDRYSPDLRQL 232 (256)
T ss_pred ccccCCcccCchhcc---CCCCCcccchHHHHHHHHHHHhCCCCcccCchH----HHHHHHHhcCCCCCCCCcCHHHHHH
Confidence 122355565543 345677999999999999999999999654332 2222333344455667789999999
Q ss_pred HHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 273 IRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 273 i~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
+.+||.. ||++|||+.++++||||
T Consensus 233 i~~~l~~-~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 233 ILSMLNL-DPSKRPQLSQIMAQPIC 256 (256)
T ss_pred HHHHccC-ChhhCCCHHHHhhCCCC
Confidence 9999999 99999999999999997
No 165
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=2.4e-41 Score=288.43 Aligned_cols=229 Identities=28% Similarity=0.402 Sum_probs=185.1
Q ss_pred ecCCcceEEEEEEEccCCeEEEEEEeecCCC-----CCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEeccCCCC
Q 040812 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRG-----TPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGS 139 (300)
Q Consensus 65 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~~~ 139 (300)
||+|+||.||+|.++.+++.||+|.+..... ...+.+|+.++++++||||+++++++.... ..|+||||+++++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~lv~e~~~~~~ 79 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKD-DLCLVMTLMNGGD 79 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCC-eEEEEEecCCCCc
Confidence 6999999999999999999999999864321 122357999999999999999999988754 8999999999999
Q ss_pred HHHHHHhCC--CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce------------------ee
Q 040812 140 LEIYVKSRG--RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS------------------CL 199 (300)
Q Consensus 140 L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~------------------~~ 199 (300)
|.+++.... .+++..+..++.|++.||.|||+.|++|+||+|+||+++.++...++.+ ..
T Consensus 80 L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 159 (277)
T cd05577 80 LKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPG 159 (277)
T ss_pred HHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCCC
Confidence 999997655 6899999999999999999999999999999999999998765433222 22
Q ss_pred ccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHhcc
Q 040812 200 YESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQK 279 (300)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~ 279 (300)
|.+||... ++.++.++|||||||++|+|++|+.||.............. .........+...++.+.++|.+||+.
T Consensus 160 y~~PE~~~---~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~ 235 (277)
T cd05577 160 YMAPEVLQ---GEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKR-RTLEMAVEYPDKFSPEAKDLCEALLQK 235 (277)
T ss_pred cCCHHHhc---CCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHh-ccccccccCCccCCHHHHHHHHHHccC
Confidence 44444432 44477899999999999999999999976544222222222 222334456667899999999999999
Q ss_pred CCCCCCC-----CHHHHhcCCCCCC
Q 040812 280 GDPSKRW-----TASQLLSHPFLAD 299 (300)
Q Consensus 280 ~dp~~Rp-----t~~~~l~hpw~~~ 299 (300)
||++|| ++.++++||||.+
T Consensus 236 -~p~~R~~~~~~~~~~ll~h~~~~~ 259 (277)
T cd05577 236 -DPEKRLGCRGGSADEVREHPLFKD 259 (277)
T ss_pred -ChhHccCCCcccHHHHHhChhhhc
Confidence 999999 8889999999975
No 166
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=4.3e-41 Score=288.82 Aligned_cols=240 Identities=30% Similarity=0.437 Sum_probs=187.7
Q ss_pred CCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-CCCHHHHHHHHhc-CCCceeEeceeeeCCC----Cc
Q 040812 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-PPNPQELNILRQT-NSPYIVKCHQIFTKPS----GE 127 (300)
Q Consensus 54 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~E~~~l~~l-~h~niv~~~~~~~~~~----~~ 127 (300)
...++|++.+.||+|+||.||++.+..+++.+|+|++...... ....+|+.+++++ +|||++++++++.... +.
T Consensus 19 ~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~ 98 (291)
T cd06639 19 DPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQ 98 (291)
T ss_pred CCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCe
Confidence 3567899999999999999999999999999999998643222 2335689999998 8999999999886432 35
Q ss_pred EEEEEeccCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-------
Q 040812 128 VSILMEYMDAGSLEIYVKS----RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY------- 196 (300)
Q Consensus 128 ~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~------- 196 (300)
.|+||||+++++|.+++.. ...+++..++.++.|++.||.|||+.|++|+||||+||+++.++...+.+
T Consensus 99 ~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~ 178 (291)
T cd06639 99 LWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQL 178 (291)
T ss_pred eEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccchhc
Confidence 8999999999999998863 34689999999999999999999999999999999999998775443221
Q ss_pred ------------eeecccccccccc--CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCC--C
Q 040812 197 ------------SCLYESGEARHRK--HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPP--S 260 (300)
Q Consensus 197 ------------~~~~~~~~~~~~~--~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~--~ 260 (300)
...|.+||..... .+..++.++|||||||++|||++|+.||......... ........+ .
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~----~~~~~~~~~~~~ 254 (291)
T cd06639 179 TSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTL----FKIPRNPPPTLL 254 (291)
T ss_pred ccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHH----HHHhcCCCCCCC
Confidence 2235556653211 1223567999999999999999999999754332222 112112222 2
Q ss_pred CCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCC
Q 040812 261 LPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLA 298 (300)
Q Consensus 261 ~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~ 298 (300)
.+...+..+.++|.+||+. ||++||++.++++||||+
T Consensus 255 ~~~~~~~~l~~li~~~l~~-~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 255 HPEKWCRSFNHFISQCLIK-DFEARPSVTHLLEHPFIK 291 (291)
T ss_pred cccccCHHHHHHHHHHhhc-ChhhCcCHHHHhcCcccC
Confidence 2445678899999999999 999999999999999995
No 167
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=2.4e-41 Score=289.31 Aligned_cols=235 Identities=27% Similarity=0.431 Sum_probs=182.9
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
+|+..+.||+|+||.||+|++..+++.||+|.+..+... ..+.+|+.++++++||||+++++++.... ..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~~~v~e 79 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTEN-KLYLVFE 79 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCC-cEEEEee
Confidence 488999999999999999999999999999988654322 23467999999999999999999987654 8999999
Q ss_pred ccCCCCHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce--------------
Q 040812 134 YMDAGSLEIYVKS--RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS-------------- 197 (300)
Q Consensus 134 ~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~-------------- 197 (300)
|+. ++|..++.. ...+++..+..++.|++.||.|||+.|++|+||+|+||+++.++...+.++
T Consensus 80 ~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (284)
T cd07860 80 FLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT 158 (284)
T ss_pred ccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCccccc
Confidence 996 589888865 346899999999999999999999999999999999999998765433221
Q ss_pred -----eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCC---------------
Q 040812 198 -----CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFRE--------------- 257 (300)
Q Consensus 198 -----~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~--------------- 257 (300)
..|.+||.... ....+.++|||||||++|+|+||+.||....................
T Consensus 159 ~~~~~~~y~aPE~~~~--~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd07860 159 HEVVTLWYRAPEILLG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKP 236 (284)
T ss_pred cccccccccCCeEEec--CCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHh
Confidence 22455554421 23357789999999999999999999975443222222111100000
Q ss_pred ---------CCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 258 ---------PPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 258 ---------~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
........+++++++|.+||.. ||++|||++++++||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~-~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 237 SFPKWARQDFSKVVPPLDEDGRDLLSQMLHY-DPNKRISAKAALAHPFF 284 (284)
T ss_pred hcccccccCHHHHcccCCHHHHHHHHHhcCC-CcccCCCHHHHhcCCCC
Confidence 0001123578899999999999 99999999999999998
No 168
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-44 Score=292.62 Aligned_cols=234 Identities=34% Similarity=0.505 Sum_probs=200.1
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEeccCC
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDA 137 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~ 137 (300)
-|.++.+||+|+||.||+|.++++|+.+|||.+..+...+....|+.+|++-..+++|++||.|-... .+|+|||||..
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~s-DLWIVMEYCGA 112 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHS-DLWIVMEYCGA 112 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcCCchhhhhhhhhccCC-ceEeehhhcCC
Confidence 37889999999999999999999999999999988887777788999999999999999999887654 79999999999
Q ss_pred CCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCC-------------------ccce
Q 040812 138 GSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHP-------------------CGYS 197 (300)
Q Consensus 138 ~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~-------------------~~~~ 197 (300)
|++.+.++. +..+++.++..+++..+.||+|||...-+|||||..|||++.++..+ +-++
T Consensus 113 GSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVIGT 192 (502)
T KOG0574|consen 113 GSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVIGT 192 (502)
T ss_pred CcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccccC
Confidence 999999975 45699999999999999999999999999999999999998776542 2346
Q ss_pred eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCC--CCCCCChHHHHHHHH
Q 040812 198 CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPS--LPECSSEKFRDFIRC 275 (300)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~ 275 (300)
.+|++||..+. ..|..++||||||++..||..|++||.+.... ..+..+..+.++. .|+.+++++.||+++
T Consensus 193 PFWMAPEVI~E---IGY~~~ADIWSLGITaIEMAEG~PPYsDIHPM----RAIFMIPT~PPPTF~KPE~WS~~F~DFi~~ 265 (502)
T KOG0574|consen 193 PFWMAPEVIEE---IGYDTKADIWSLGITAIEMAEGRPPYSDIHPM----RAIFMIPTKPPPTFKKPEEWSSEFNDFIRS 265 (502)
T ss_pred cccccHHHHHH---hccchhhhHhhhcchhhhhhcCCCCccccccc----ceeEeccCCCCCCCCChHhhhhHHHHHHHH
Confidence 67888887763 23566999999999999999999999754332 2222233344444 367889999999999
Q ss_pred HhccCCCCCCCCHHHHhcCCCCCCC
Q 040812 276 CLQKGDPSKRWTASQLLSHPFLADA 300 (300)
Q Consensus 276 ~l~~~dp~~Rpt~~~~l~hpw~~~~ 300 (300)
||.+ +|++|-|+.++++|||++++
T Consensus 266 CLiK-~PE~R~TA~~L~~H~FiknA 289 (502)
T KOG0574|consen 266 CLIK-KPEERKTALRLCEHTFIKNA 289 (502)
T ss_pred HhcC-CHHHHHHHHHHhhhhhhcCC
Confidence 9999 99999999999999999875
No 169
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-43 Score=284.53 Aligned_cols=235 Identities=23% Similarity=0.363 Sum_probs=189.1
Q ss_pred eeeecCCcceEEEEEEEccCCeEEEEEEeecCCC--CCCCHHHHHHHHhc-CCCceeEeceeeeCCCCcEEEEEeccCCC
Q 040812 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG--TPPNPQELNILRQT-NSPYIVKCHQIFTKPSGEVSILMEYMDAG 138 (300)
Q Consensus 62 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~lv~e~~~~~ 138 (300)
.+.||+|+|+.|--|....++..||||++.+... .....+|++++.+- .|+||++++++|+++. .+|+|||.+.||
T Consensus 83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~-~FYLVfEKm~GG 161 (463)
T KOG0607|consen 83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDT-RFYLVFEKMRGG 161 (463)
T ss_pred HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccc-eEEEEEecccCc
Confidence 3679999999999999999999999999976432 23346799999886 5999999999999876 899999999999
Q ss_pred CHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCC--------------------------
Q 040812 139 SLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEH-------------------------- 192 (300)
Q Consensus 139 ~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~-------------------------- 192 (300)
+|...+.++..|++.++..+++.|++||.|||.+||.||||||+|||.......
T Consensus 162 plLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP 241 (463)
T KOG0607|consen 162 PLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTP 241 (463)
T ss_pred hHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCc
Confidence 999999999899999999999999999999999999999999999998653221
Q ss_pred ----Cccceeeccccccccc--cCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCC----------chHHHHHHHHhhC
Q 040812 193 ----PCGYSCLYESGEARHR--KHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQE----------PDFLSLMLAICFR 256 (300)
Q Consensus 193 ----~~~~~~~~~~~~~~~~--~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~----------~~~~~~~~~~~~~ 256 (300)
++ ++.-|++||.... ....+|..++|.||||||+|-|++|.+||.+.... ..-.+.+-...+.
T Consensus 242 ~L~tPv-GSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQE 320 (463)
T KOG0607|consen 242 ELLTPV-GSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQE 320 (463)
T ss_pred cccCcc-cchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhc
Confidence 11 2334667766442 23456888999999999999999999999653221 1112222222223
Q ss_pred CCCCC----CCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 257 EPPSL----PECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 257 ~~~~~----~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
....+ +..++.+.+|+|..+|.. |+..|.++.++++|||++.
T Consensus 321 GkYeFPdkdWahIS~eakdlisnLlvr-da~~rlsa~~vlnhPw~~~ 366 (463)
T KOG0607|consen 321 GKYEFPDKDWAHISSEAKDLISNLLVR-DAKQRLSAAQVLNHPWVQR 366 (463)
T ss_pred cCCcCChhhhHHhhHHHHHHHHHHHhc-cHHhhhhhhhccCCccccc
Confidence 33344 446799999999999999 9999999999999999974
No 170
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=3.6e-41 Score=291.78 Aligned_cols=242 Identities=23% Similarity=0.334 Sum_probs=186.7
Q ss_pred CCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC----CCHHHHHHHHhcCCCceeEeceeeeCCC-CcE
Q 040812 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP----PNPQELNILRQTNSPYIVKCHQIFTKPS-GEV 128 (300)
Q Consensus 54 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~ 128 (300)
...++|++.+.||+|+||.||+|.+..+++.||+|.++...... ...+|+.++++++|+||+++++++.... +..
T Consensus 4 ~~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (309)
T cd07845 4 RSVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSI 83 (309)
T ss_pred ccccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeE
Confidence 35788999999999999999999999999999999987543322 2357999999999999999999986543 368
Q ss_pred EEEEeccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-----------
Q 040812 129 SILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY----------- 196 (300)
Q Consensus 129 ~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~----------- 196 (300)
++||||+++ +|.+++.. ...+++..+..++.||+.||.|||+.|++||||||+||+++.++...+.+
T Consensus 84 ~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~ 162 (309)
T cd07845 84 FLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPA 162 (309)
T ss_pred EEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCcc
Confidence 999999975 88888875 35689999999999999999999999999999999999999875543222
Q ss_pred --------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhC------------
Q 040812 197 --------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFR------------ 256 (300)
Q Consensus 197 --------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~------------ 256 (300)
...|.+||.... ...++.++|||||||++|||++|..||...+.......+.......
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~--~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
T cd07845 163 KPMTPKVVTLWYRAPELLLG--CTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLP 240 (309)
T ss_pred CCCCcccccccccChhhhcC--CCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhccc
Confidence 122455554321 2346779999999999999999999997544332222222110000
Q ss_pred --CCCCC-----------CCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 257 --EPPSL-----------PECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 257 --~~~~~-----------~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
..... ....++.+.++|.+||.. ||++|||++++++||||++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~-dp~~R~t~~~il~h~~f~~ 295 (309)
T cd07845 241 LVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMY-DPKKRATAEEALESSYFKE 295 (309)
T ss_pred ccccccccCCCCCchHHhccccCHHHHHHHHHHhcC-ChhhCcCHHHHhcChhhcc
Confidence 00000 012478899999999999 9999999999999999975
No 171
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=5.4e-41 Score=288.16 Aligned_cols=237 Identities=26% Similarity=0.344 Sum_probs=180.3
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC---CCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEE
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP---PNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILM 132 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~ 132 (300)
..+|++.+.||+|+||.||+|.+..+++.||+|.+....... ...+|+.+++.++|+||+++++++.... ..|+||
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~-~~~lv~ 82 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKE-TLTFVF 82 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCC-eEEEEE
Confidence 467999999999999999999999999999999987543322 2367999999999999999999988654 899999
Q ss_pred eccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcccee-------------
Q 040812 133 EYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSC------------- 198 (300)
Q Consensus 133 e~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~------------- 198 (300)
||+. ++|.+++.. ...+++..++.++.|++.||.|||+.|++|+||||+||+++.++...+++++
T Consensus 83 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 161 (291)
T cd07870 83 EYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYS 161 (291)
T ss_pred eccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCC
Confidence 9996 577666654 3467889999999999999999999999999999999999877654333222
Q ss_pred ------eccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhh-----------CC----
Q 040812 199 ------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICF-----------RE---- 257 (300)
Q Consensus 199 ------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~-----------~~---- 257 (300)
.|.+||.... ...++.++|||||||++|+|+||..||.................. ..
T Consensus 162 ~~~~~~~y~aPE~~~~--~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (291)
T cd07870 162 SEVVTLWYRPPDVLLG--ATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYK 239 (291)
T ss_pred CccccccccCCceeec--CCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhccccc
Confidence 2445554321 123567899999999999999999999654332111111110000 00
Q ss_pred --------CCCC---C--CCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 258 --------PPSL---P--ECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 258 --------~~~~---~--~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
+... . ...+..+.+++.+|+.. ||++|||+.+++.||||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~-dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 240 PEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMM-FPKDRISAQDALLHPYF 291 (291)
T ss_pred chhccccCCcchhhhccccCCChHHHHHHHHHhCc-CcccCcCHHHHhcCCCC
Confidence 0000 0 01256789999999999 99999999999999998
No 172
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.8e-41 Score=289.78 Aligned_cols=239 Identities=33% Similarity=0.476 Sum_probs=186.5
Q ss_pred CCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCC-CCCCHHHHHHHHhc-CCCceeEeceeeeCC-----CC
Q 040812 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG-TPPNPQELNILRQT-NSPYIVKCHQIFTKP-----SG 126 (300)
Q Consensus 54 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l-~h~niv~~~~~~~~~-----~~ 126 (300)
+..+.|++.+.||+|+||.||+|.+..+++.+|+|++..... ......|+.+++++ +|+||+++++++... ..
T Consensus 13 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 92 (282)
T cd06636 13 DPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDD 92 (282)
T ss_pred ChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCC
Confidence 345789999999999999999999999999999999865432 22345688888888 699999999987531 23
Q ss_pred cEEEEEeccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc--------
Q 040812 127 EVSILMEYMDAGSLEIYVKSR--GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY-------- 196 (300)
Q Consensus 127 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~-------- 196 (300)
..|++|||+++|+|.+++... ..+++..+..++.||+.||.|||+.|++|+||||+||+++.++...+.+
T Consensus 93 ~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~ 172 (282)
T cd06636 93 QLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 172 (282)
T ss_pred EEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhhhh
Confidence 689999999999999999753 3588999999999999999999999999999999999999776543322
Q ss_pred -----------eeecccccccccc--CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCC-CCC
Q 040812 197 -----------SCLYESGEARHRK--HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPP-SLP 262 (300)
Q Consensus 197 -----------~~~~~~~~~~~~~--~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~ 262 (300)
...|.+||..... .+..++.++|||||||++|||+||..||......... ........+ ...
T Consensus 173 ~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~----~~~~~~~~~~~~~ 248 (282)
T cd06636 173 RTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRAL----FLIPRNPPPKLKS 248 (282)
T ss_pred ccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhh----hhHhhCCCCCCcc
Confidence 2235566654321 1334667899999999999999999999654322111 111112222 223
Q ss_pred CCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 263 ECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 263 ~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
..++..+.++|.+||.. ||.+|||+.++++||||
T Consensus 249 ~~~~~~~~~li~~cl~~-~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 249 KKWSKKFIDFIEGCLVK-NYLSRPSTEQLLKHPFI 282 (282)
T ss_pred cccCHHHHHHHHHHhCC-ChhhCcCHHHHhcCCCC
Confidence 45788999999999999 99999999999999998
No 173
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=9.8e-42 Score=302.41 Aligned_cols=235 Identities=22% Similarity=0.292 Sum_probs=185.1
Q ss_pred CccCCCCcceeeeeecCCcceEEEEEEEccC-----CeEEEEEEeecCCCCC---CCHHHHHHHHhc-CCCceeEeceee
Q 040812 51 QEIDGLSQLEKLQVLGQGNGGTVFKVRHKQT-----LALYALKVMQCDRGTP---PNPQELNILRQT-NSPYIVKCHQIF 121 (300)
Q Consensus 51 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~~~~---~~~~E~~~l~~l-~h~niv~~~~~~ 121 (300)
.+....++|++.+.||+|+||.||+|.+..+ +..||+|.++...... .+.+|+.+++.+ +|+||+++++++
T Consensus 32 ~~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~ 111 (374)
T cd05106 32 KWEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGAC 111 (374)
T ss_pred cccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEe
Confidence 3445667899999999999999999997543 3579999987543322 245799999999 899999999998
Q ss_pred eCCCCcEEEEEeccCCCCHHHHHHhC------------------------------------------------------
Q 040812 122 TKPSGEVSILMEYMDAGSLEIYVKSR------------------------------------------------------ 147 (300)
Q Consensus 122 ~~~~~~~~lv~e~~~~~~L~~~l~~~------------------------------------------------------ 147 (300)
.... ..|+|||||++|+|.+++...
T Consensus 112 ~~~~-~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (374)
T cd05106 112 THGG-PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSS 190 (374)
T ss_pred cCCC-CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccc
Confidence 7754 899999999999999988532
Q ss_pred ----------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce--------------
Q 040812 148 ----------------GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS-------------- 197 (300)
Q Consensus 148 ----------------~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~-------------- 197 (300)
..+++..++.++.||+.||.|||++||+||||||+|||++.+....++++
T Consensus 191 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~ 270 (374)
T cd05106 191 SSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVV 270 (374)
T ss_pred ccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceee
Confidence 13678889999999999999999999999999999999987654332221
Q ss_pred -------eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHH
Q 040812 198 -------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269 (300)
Q Consensus 198 -------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 269 (300)
..|.+||... +..++.++|||||||++|||++ |+.||............. ........+...++++
T Consensus 271 ~~~~~~~~~y~aPE~~~---~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l 344 (374)
T cd05106 271 KGNARLPVKWMAPESIF---DCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMV---KRGYQMSRPDFAPPEI 344 (374)
T ss_pred ccCCCCccceeCHHHhc---CCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHH---HcccCccCCCCCCHHH
Confidence 1255555543 4567889999999999999997 999997654433332222 2233445566678999
Q ss_pred HHHHHHHhccCCCCCCCCHHHHhc
Q 040812 270 RDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 270 ~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
.++|.+||.. ||++|||+.++++
T Consensus 345 ~~li~~cl~~-dp~~RPs~~~l~~ 367 (374)
T cd05106 345 YSIMKMCWNL-EPTERPTFSQISQ 367 (374)
T ss_pred HHHHHHHcCC-ChhhCcCHHHHHH
Confidence 9999999999 9999999999875
No 174
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=3.6e-41 Score=288.44 Aligned_cols=243 Identities=29% Similarity=0.396 Sum_probs=189.2
Q ss_pred CCccCCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-CCCHHHHHHHHhc-CCCceeEeceeeeC----
Q 040812 50 GQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-PPNPQELNILRQT-NSPYIVKCHQIFTK---- 123 (300)
Q Consensus 50 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~E~~~l~~l-~h~niv~~~~~~~~---- 123 (300)
....+..++|++.+.||+|+||.||+|.+..+++.+|+|++...... ..+.+|+.+++++ +|+||+++++++..
T Consensus 11 ~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 90 (286)
T cd06638 11 DSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVK 90 (286)
T ss_pred ecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccC
Confidence 34456778999999999999999999999999999999987653322 2345799999998 69999999998742
Q ss_pred CCCcEEEEEeccCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc---
Q 040812 124 PSGEVSILMEYMDAGSLEIYVKS----RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY--- 196 (300)
Q Consensus 124 ~~~~~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~--- 196 (300)
..+..++||||+++++|.+++.. ...+++..+..++.|++.||.|||+.+++||||||+||+++.++...+..
T Consensus 91 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~ 170 (286)
T cd06638 91 NGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGV 170 (286)
T ss_pred CCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCc
Confidence 23468999999999999988753 34688999999999999999999999999999999999999876443221
Q ss_pred ----------------eeeccccccccc--cCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCC-
Q 040812 197 ----------------SCLYESGEARHR--KHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFRE- 257 (300)
Q Consensus 197 ----------------~~~~~~~~~~~~--~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~- 257 (300)
+..|.+||.... ..+..++.++|||||||++|||+||+.||......... .......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~----~~~~~~~~ 246 (286)
T cd06638 171 SAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRAL----FKIPRNPP 246 (286)
T ss_pred eeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHH----hhccccCC
Confidence 223555665421 12344677999999999999999999999654332211 1111111
Q ss_pred -CCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 258 -PPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 258 -~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
....+...+..+.++|.+||.. ||++|||+.|+++|+||
T Consensus 247 ~~~~~~~~~~~~~~~li~~~l~~-~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 247 PTLHQPELWSNEFNDFIRKCLTK-DYEKRPTVSDLLQHVFI 286 (286)
T ss_pred CcccCCCCcCHHHHHHHHHHccC-CcccCCCHHHHhhcccC
Confidence 1223455678899999999999 99999999999999997
No 175
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=9e-43 Score=275.16 Aligned_cols=241 Identities=30% Similarity=0.370 Sum_probs=192.8
Q ss_pred CCccCCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC--CCCHHHHHHHHhcCCCceeEeceeeeCC---
Q 040812 50 GQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPNPQELNILRQTNSPYIVKCHQIFTKP--- 124 (300)
Q Consensus 50 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~E~~~l~~l~h~niv~~~~~~~~~--- 124 (300)
+....+-++|++.+.||+|||+.||+++...+++.||+|.+...... ....+|+...++++|||+++++++...+
T Consensus 14 ~tv~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D 93 (302)
T KOG2345|consen 14 GTVIINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKD 93 (302)
T ss_pred CcEEEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhcc
Confidence 45556778999999999999999999999999999999998765532 2346799999999999999999876432
Q ss_pred -CCcEEEEEeccCCCCHHHHHHh---CC-CCCHHHHHHHHHHHHHHHHHhHhCC--ccccCCCCCceeecCCCCCCcc--
Q 040812 125 -SGEVSILMEYMDAGSLEIYVKS---RG-RLSEDIICTISRQVLKGLFYMHSRN--IVHRDIKPANVLINEKMEHPCG-- 195 (300)
Q Consensus 125 -~~~~~lv~e~~~~~~L~~~l~~---~~-~l~~~~~~~i~~qi~~~l~~lH~~~--i~H~Dlkp~Nill~~~~~~~~~-- 195 (300)
....|++++|...|+|.+.++. .+ .+++.++..|+.+|++||++||+.. ++||||||.|||+++.+.....
T Consensus 94 ~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~ 173 (302)
T KOG2345|consen 94 GKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDL 173 (302)
T ss_pred CceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEec
Confidence 2249999999999999999875 22 5899999999999999999999998 9999999999999986543211
Q ss_pred --------------------------ceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHH
Q 040812 196 --------------------------YSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSL 249 (300)
Q Consensus 196 --------------------------~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~ 249 (300)
.+..|.+||......+...+.++|||||||++|.|+.|..||....+.......
T Consensus 174 GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaL 253 (302)
T KOG2345|consen 174 GSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLAL 253 (302)
T ss_pred cCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEE
Confidence 144578888888777788889999999999999999999999543221111110
Q ss_pred HHHHhhCCCCCCC--CCCChHHHHHHHHHhccCCCCCCCCHHHHhcC
Q 040812 250 MLAICFREPPSLP--ECSSEKFRDFIRCCLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 250 ~~~~~~~~~~~~~--~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~h 294 (300)
.+ .+....+| ...++.+.++|+.||+. ||.+||++.+++.+
T Consensus 254 --Av-~n~q~s~P~~~~yse~l~~lik~mlqv-dP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 254 --AV-QNAQISIPNSSRYSEALHQLIKSMLQV-DPNQRPTIPELLSK 296 (302)
T ss_pred --ee-eccccccCCCCCccHHHHHHHHHHhcC-CcccCCCHHHHHHH
Confidence 01 11112222 23789999999999999 99999999999864
No 176
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.6e-41 Score=290.48 Aligned_cols=237 Identities=27% Similarity=0.387 Sum_probs=184.4
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILM 132 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~ 132 (300)
++|++.+.||+|+||.||+|.+..+++.||+|.+...... ..+.+|+.+++.++|+||+++++++.... ..|+||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~ 79 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKK-RLYLVF 79 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCC-eEEEEE
Confidence 4689999999999999999999988999999987643322 23467999999999999999999987654 899999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce---------------
Q 040812 133 EYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS--------------- 197 (300)
Q Consensus 133 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~--------------- 197 (300)
||+++++|..+......+++..++.++.||+.||.|||+.|++|+||+|+||++++++...+..+
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (286)
T cd07846 80 EFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTD 159 (286)
T ss_pred ecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccCc
Confidence 99999999888776667999999999999999999999999999999999999998765433222
Q ss_pred ----eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhh-----------------C
Q 040812 198 ----CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICF-----------------R 256 (300)
Q Consensus 198 ----~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~-----------------~ 256 (300)
..|.+||.... ...++.++|||||||++|||+||++||.................. .
T Consensus 160 ~~~~~~y~aPE~~~~--~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (286)
T cd07846 160 YVATRWYRAPELLVG--DTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGM 237 (286)
T ss_pred ccceeeccCcHHhcc--ccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhcc
Confidence 22445554321 133567899999999999999999999644321111111100000 0
Q ss_pred CCC---------CCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 257 EPP---------SLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 257 ~~~---------~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
..+ .....++..+.+++.+||.. ||++||++.++++||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~-~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 238 RLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRI-DPDDRPSSSQLLHHEFF 286 (286)
T ss_pred ccccccCcchHHHhCCCcCHHHHHHHHHHhcC-CcccchhHHHHhcCCCC
Confidence 000 01234578899999999999 99999999999999998
No 177
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-43 Score=307.86 Aligned_cols=242 Identities=32% Similarity=0.483 Sum_probs=204.6
Q ss_pred cCCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCC--CCCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEE
Q 040812 53 IDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDR--GTPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSI 130 (300)
Q Consensus 53 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~l 130 (300)
+.+.+-|+++..||.|+||.||+|..+.++-..|.|++.... ....+..||.+|..-.||+||.+++.|..++ .+||
T Consensus 28 lnP~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~en-kLwi 106 (1187)
T KOG0579|consen 28 LNPRDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFEN-KLWI 106 (1187)
T ss_pred CCHHHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccC-ceEE
Confidence 344556889999999999999999999999899999885433 3345677999999999999999999887765 8999
Q ss_pred EEeccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCC-----------------
Q 040812 131 LMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEH----------------- 192 (300)
Q Consensus 131 v~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~----------------- 192 (300)
+.|||.||-....+-. ...+++.++.-+++|++.||.|||+++|+|||||+.|||++.+|..
T Consensus 107 liEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qk 186 (1187)
T KOG0579|consen 107 LIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQK 186 (1187)
T ss_pred EEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchhHHhh
Confidence 9999999999887765 4469999999999999999999999999999999999999877654
Q ss_pred --Cccceeecccccccc--ccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCC--CCCCC
Q 040812 193 --PCGYSCLYESGEARH--RKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL--PECSS 266 (300)
Q Consensus 193 --~~~~~~~~~~~~~~~--~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 266 (300)
.+-++..|++|+..- .....+|.+++||||||++|.||..+.+|.... +.+.++..+....+|.+ |..++
T Consensus 187 RDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhel----npMRVllKiaKSePPTLlqPS~Ws 262 (1187)
T KOG0579|consen 187 RDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHEL----NPMRVLLKIAKSEPPTLLQPSHWS 262 (1187)
T ss_pred hccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCcccc----chHHHHHHHhhcCCCcccCcchhh
Confidence 234577788988643 334567899999999999999999999998543 33455566666666654 77889
Q ss_pred hHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCCC
Q 040812 267 EKFRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300 (300)
Q Consensus 267 ~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~~ 300 (300)
..+.||+.+||.+ ||..||+++++++||||.++
T Consensus 263 ~~F~DfLk~cL~K-np~~Rp~aaqll~Hpfv~~~ 295 (1187)
T KOG0579|consen 263 RSFSDFLKRCLVK-NPRNRPPAAQLLKHPFVQNA 295 (1187)
T ss_pred hHHHHHHHHHHhc-CCccCCCHHHHhhCcccccC
Confidence 9999999999999 99999999999999999864
No 178
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=2.7e-41 Score=288.03 Aligned_cols=233 Identities=34% Similarity=0.534 Sum_probs=189.7
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
..|+..+.||+|+||.||+|.+..++..||+|++...... ..+.+|+.++++++|+||+++++++.... ..|+|||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e 82 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGT-KLWIIME 82 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC-EEEEEEe
Confidence 3578889999999999999999999999999998754322 23457999999999999999999988754 8999999
Q ss_pred ccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-----------------
Q 040812 134 YMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY----------------- 196 (300)
Q Consensus 134 ~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~----------------- 196 (300)
|+++++|.+++.. +.+++..+..++.|++.||.|||+.+++|+||+|+||+++.++...+.+
T Consensus 83 ~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 161 (277)
T cd06640 83 YLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF 161 (277)
T ss_pred cCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCccccccc
Confidence 9999999999875 4789999999999999999999999999999999999999765443222
Q ss_pred --eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHH
Q 040812 197 --SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIR 274 (300)
Q Consensus 197 --~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 274 (300)
+..|.+||... +...+.++|+|||||++|||+||..||...... ...........+..+...+..+.++|.
T Consensus 162 ~~~~~y~apE~~~---~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~li~ 234 (277)
T cd06640 162 VGTPFWMAPEVIQ---QSAYDSKADIWSLGITAIELAKGEPPNSDMHPM----RVLFLIPKNNPPTLTGEFSKPFKEFID 234 (277)
T ss_pred cCcccccCHhHhc---cCCCccHHHHHHHHHHHHHHHHCCCCCCCcChH----hHhhhhhcCCCCCCchhhhHHHHHHHH
Confidence 12244555432 455678999999999999999999999654322 122222233445556667889999999
Q ss_pred HHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 275 CCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 275 ~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
+||.. +|++||++.++++||||.+
T Consensus 235 ~~l~~-~p~~Rp~~~~il~~~~~~~ 258 (277)
T cd06640 235 ACLNK-DPSFRPTAKELLKHKFIVK 258 (277)
T ss_pred HHccc-CcccCcCHHHHHhChHhhh
Confidence 99999 9999999999999999964
No 179
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=4.4e-41 Score=287.63 Aligned_cols=223 Identities=17% Similarity=0.225 Sum_probs=179.3
Q ss_pred eeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC-----CCHHHHHHHHhcCCCceeEeceeeeC--C-CCcEEEEEec
Q 040812 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP-----PNPQELNILRQTNSPYIVKCHQIFTK--P-SGEVSILMEY 134 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----~~~~E~~~l~~l~h~niv~~~~~~~~--~-~~~~~lv~e~ 134 (300)
..||+|++|.||+|.. +|+.||+|.++...... .+.+|+.+|++++||||+++++++.+ + ....++||||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 6799999999999998 47899999987643322 23589999999999999999998865 2 2368999999
Q ss_pred cCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCceeecCCCCCCccc----------------e
Q 040812 135 MDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHS-RNIVHRDIKPANVLINEKMEHPCGY----------------S 197 (300)
Q Consensus 135 ~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~-~~i~H~Dlkp~Nill~~~~~~~~~~----------------~ 197 (300)
+++|+|.+++.....+++.....++.|++.||.|||+ .+++||||||+||+++.++..++.+ +
T Consensus 104 ~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~ 183 (283)
T PHA02988 104 CTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNVNF 183 (283)
T ss_pred CCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccccccccCc
Confidence 9999999999888789999999999999999999998 4999999999999999876543322 2
Q ss_pred eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHH-hhCCCCCCCCCCChHHHHHHHHH
Q 040812 198 CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAI-CFREPPSLPECSSEKFRDFIRCC 276 (300)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~ 276 (300)
..|.+||..... ...++.++|||||||++|||+||+.||...... .....+ .....+..+...++.++++|.+|
T Consensus 184 ~~y~aPE~~~~~-~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~----~~~~~i~~~~~~~~~~~~~~~~l~~li~~c 258 (283)
T PHA02988 184 MVYFSYKMLNDI-FSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK----EIYDLIINKNNSLKLPLDCPLEIKCIVEAC 258 (283)
T ss_pred ccccCHHHhhhc-cccccchhhhhHHHHHHHHHHHCCCCCCCCCHH----HHHHHHHhcCCCCCCCCcCcHHHHHHHHHH
Confidence 335566654321 245778999999999999999999999754322 222222 22344556666889999999999
Q ss_pred hccCCCCCCCCHHHHhc
Q 040812 277 LQKGDPSKRWTASQLLS 293 (300)
Q Consensus 277 l~~~dp~~Rpt~~~~l~ 293 (300)
|+. ||++|||++++++
T Consensus 259 l~~-dp~~Rps~~ell~ 274 (283)
T PHA02988 259 TSH-DSIKRPNIKEILY 274 (283)
T ss_pred hcC-CcccCcCHHHHHH
Confidence 999 9999999999985
No 180
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=3.6e-41 Score=286.43 Aligned_cols=234 Identities=28% Similarity=0.460 Sum_probs=183.4
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC------------CCCHHHHHHHHhcCCCceeEeceeeeCCC
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT------------PPNPQELNILRQTNSPYIVKCHQIFTKPS 125 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~------------~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 125 (300)
+|.+.+.||+|+||.||+|.+..+++.+|+|.++..... ..+.+|+.++++++|+|++++++++....
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 478889999999999999999989999999988642211 12346899999999999999999887654
Q ss_pred CcEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc---------
Q 040812 126 GEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY--------- 196 (300)
Q Consensus 126 ~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~--------- 196 (300)
..++||||+.+++|.+++...+.+++..++.++.||+.||.|||++|++|+||+|+||+++.++...+..
T Consensus 82 -~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~ 160 (272)
T cd06629 82 -YLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDD 160 (272)
T ss_pred -ceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeeccccccccc
Confidence 8999999999999999998877899999999999999999999999999999999999998765433221
Q ss_pred ------------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCC--
Q 040812 197 ------------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLP-- 262 (300)
Q Consensus 197 ------------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-- 262 (300)
+..|.+||..... ...++.++|+||||+++|+|++|..||............ .........+
T Consensus 161 ~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~ 236 (272)
T cd06629 161 IYDNDQNMSMQGSVFWMAPEVIHSY-SQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKL---GNKRSAPPIPPD 236 (272)
T ss_pred cccccccccccCCccccCHHHhccc-cCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHh---hccccCCcCCcc
Confidence 1224445443211 123577899999999999999999999643322111111 1111122222
Q ss_pred --CCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 263 --ECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 263 --~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
..++..+.++|.+||.. +|++||+++++++||||
T Consensus 237 ~~~~~~~~~~~li~~~l~~-~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 237 VSMNLSPVALDFLNACFTI-NPDNRPTARELLQHPFI 272 (272)
T ss_pred ccccCCHHHHHHHHHHhcC-ChhhCCCHHHHhhCCCC
Confidence 24578999999999999 99999999999999997
No 181
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=6.6e-41 Score=287.27 Aligned_cols=237 Identities=21% Similarity=0.354 Sum_probs=186.4
Q ss_pred CCCcceeeeeecCCcceEEEEEEEcc-----CCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCC
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQ-----TLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSG 126 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 126 (300)
..++|++.+.||+|+||.||+|..+. .+..||+|.+...... ..+.+|+.+++.++|+||+++++++....
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~- 82 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ- 82 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC-
Confidence 45789999999999999999997652 3568999987643321 12356899999999999999999987654
Q ss_pred cEEEEEeccCCCCHHHHHHhC----------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc
Q 040812 127 EVSILMEYMDAGSLEIYVKSR----------GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY 196 (300)
Q Consensus 127 ~~~lv~e~~~~~~L~~~l~~~----------~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~ 196 (300)
..|+||||+++|+|.+++... ..++...+..++.|++.||.|||++|++||||||+||+++.++...+.+
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~D 162 (288)
T cd05061 83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGD 162 (288)
T ss_pred CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECc
Confidence 899999999999999999752 2346678899999999999999999999999999999999876543322
Q ss_pred ee---------------------eccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHh
Q 040812 197 SC---------------------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAIC 254 (300)
Q Consensus 197 ~~---------------------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~ 254 (300)
++ .|.+||... ++.++.++|||||||++|||++ |..||...... .....+.
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~---~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~----~~~~~~~ 235 (288)
T cd05061 163 FGMTRDIYETDYYRKGGKGLLPVRWMAPESLK---DGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE----QVLKFVM 235 (288)
T ss_pred CCccccccccccccccCCCcccccccCHHHhc---cCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHHHH
Confidence 21 244444432 4556789999999999999998 78899654322 2222233
Q ss_pred hCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhc------CCCCCCC
Q 040812 255 FREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLS------HPFLADA 300 (300)
Q Consensus 255 ~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~------hpw~~~~ 300 (300)
.......+...++.+.+++.+||.. ||++|||+.++++ ||||+++
T Consensus 236 ~~~~~~~~~~~~~~~~~li~~~l~~-~p~~Rps~~~ll~~l~~~~~~~~~~~ 286 (288)
T cd05061 236 DGGYLDQPDNCPERVTDLMRMCWQF-NPKMRPTFLEIVNLLKDDLHPSFPEV 286 (288)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHcCC-ChhHCcCHHHHHHHHHhhcCCCCCCC
Confidence 3444455667789999999999999 9999999999987 9999875
No 182
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=5.6e-41 Score=282.65 Aligned_cols=231 Identities=26% Similarity=0.394 Sum_probs=186.7
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCC----CCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG----TPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
+|++.+.||+|+||.||++.++.++..+|+|.+..... .....+|+.++++++|+||+++++.+.... ..|+|+|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~-~~~lv~e 79 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENG-RLFIVME 79 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCC-eEEEEEe
Confidence 58899999999999999999999999999999875422 223457999999999999999999987754 8999999
Q ss_pred ccCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCC-Ccc---------------
Q 040812 134 YMDAGSLEIYVKSRG--RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEH-PCG--------------- 195 (300)
Q Consensus 134 ~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~-~~~--------------- 195 (300)
|+++++|.+++.... .+++..+..++.|++.||.|||+.+++|+||||+||+++.++.. .++
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~ 159 (257)
T cd08225 80 YCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELA 159 (257)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCcccc
Confidence 999999999997543 47999999999999999999999999999999999999876431 111
Q ss_pred ----ceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHH
Q 040812 196 ----YSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRD 271 (300)
Q Consensus 196 ----~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (300)
+...|.+||... +...+.++|+|||||++|+|++|..||...... ..............+...+..+.+
T Consensus 160 ~~~~~~~~~~ape~~~---~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 232 (257)
T cd08225 160 YTCVGTPYYLSPEICQ---NRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLH----QLVLKICQGYFAPISPNFSRDLRS 232 (257)
T ss_pred cccCCCccccCHHHHc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH----HHHHHHhcccCCCCCCCCCHHHHH
Confidence 112244444332 344677999999999999999999999654322 223333333344445567889999
Q ss_pred HHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 272 FIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 272 li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
+|.+||.. +|++|||+.++++||||
T Consensus 233 ~i~~~l~~-~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 233 LISQLFKV-SPRDRPSITSILKRPFL 257 (257)
T ss_pred HHHHHhcc-ChhhCcCHHHHhhCCCC
Confidence 99999999 99999999999999998
No 183
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=5.6e-41 Score=291.46 Aligned_cols=232 Identities=24% Similarity=0.370 Sum_probs=170.4
Q ss_pred eeeecCCcceEEEEEEEcc--CCeEEEEEEeecCCCCCCCHHHHHHHHhcCCCceeEeceeeeCC-CCcEEEEEeccCCC
Q 040812 62 LQVLGQGNGGTVFKVRHKQ--TLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQIFTKP-SGEVSILMEYMDAG 138 (300)
Q Consensus 62 ~~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~~lv~e~~~~~ 138 (300)
..+||+|+||.||+|+.+. +++.||+|.+..........+|+.++++++||||+++++++... ....|+||||+++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~- 84 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH- 84 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC-
Confidence 3679999999999999754 56889999987655444567899999999999999999987532 3468999999976
Q ss_pred CHHHHHHhC---------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCC----CCCC---cc-------
Q 040812 139 SLEIYVKSR---------GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEK----MEHP---CG------- 195 (300)
Q Consensus 139 ~L~~~l~~~---------~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~----~~~~---~~------- 195 (300)
+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||+..+ +... +|
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~ 164 (317)
T cd07867 85 DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 164 (317)
T ss_pred cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCC
Confidence 787776421 247899999999999999999999999999999999999432 2221 11
Q ss_pred ------------ceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCch---------HHHHHHHHh
Q 040812 196 ------------YSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPD---------FLSLMLAIC 254 (300)
Q Consensus 196 ------------~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~---------~~~~~~~~~ 254 (300)
++..|.+||.... ...++.++|||||||++|||+||++||........ .........
T Consensus 165 ~~~~~~~~~~~~~t~~y~aPE~~~~--~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (317)
T cd07867 165 PLKPLADLDPVVVTFWYRAPELLLG--ARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMG 242 (317)
T ss_pred CcccccccCcceecccccCcHHhcC--CCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcC
Confidence 1223566665431 23467899999999999999999999964332110 000000000
Q ss_pred hC----------C-----------------------CCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 255 FR----------E-----------------------PPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 255 ~~----------~-----------------------~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
.. . ........+..+.++|.+||+. ||.+|||++|+++||||
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~-dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 243 FPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTM-DPTKRITSEQALQDPYF 317 (317)
T ss_pred CCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhcc-CcccccCHHHHhcCCCC
Confidence 00 0 0000112345688999999999 99999999999999998
No 184
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=5.3e-41 Score=288.66 Aligned_cols=238 Identities=26% Similarity=0.384 Sum_probs=181.3
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC----CCCHHHHHHHHhcC-CCceeEeceeeeCCCC----c
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT----PPNPQELNILRQTN-SPYIVKCHQIFTKPSG----E 127 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~----~ 127 (300)
++|++.+.||+|+||.||+|.+..+++.||+|.++..... ..+.+|+.+++++. |+||+++++++..... .
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 4689999999999999999999999999999998654322 23467999999995 5999999998765431 3
Q ss_pred EEEEEeccCCCCHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecC-CCCCCcccee---
Q 040812 128 VSILMEYMDAGSLEIYVKSR-----GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINE-KMEHPCGYSC--- 198 (300)
Q Consensus 128 ~~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~-~~~~~~~~~~--- 198 (300)
.|+||||+++ +|.+++... ..+++..++.++.||+.||.|||++|++||||||+||+++. ++...+++++
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~ 159 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGR 159 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccce
Confidence 8999999986 888887642 34799999999999999999999999999999999999998 5443322211
Q ss_pred ----------------eccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCC-----
Q 040812 199 ----------------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFRE----- 257 (300)
Q Consensus 199 ----------------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~----- 257 (300)
.|.+||.... ...++.++|||||||++|+|+||..||...........+........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (295)
T cd07837 160 AFSIPVKSYTHEIVTLWYRAPEVLLG--STHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWP 237 (295)
T ss_pred ecCCCccccCCcccccCCCChHHhhC--CCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCc
Confidence 2444554321 23457799999999999999999999976443332222221110000
Q ss_pred --------------C----CCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCC
Q 040812 258 --------------P----PSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLA 298 (300)
Q Consensus 258 --------------~----~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~ 298 (300)
. .......++.+.+||.+||.. ||++||++.++++||||+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~-~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 238 GVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRY-DPAKRISAKAALTHPYFD 295 (295)
T ss_pred chhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccC-ChhhcCCHHHHhcCCCcC
Confidence 0 000124678899999999999 999999999999999995
No 185
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.6e-40 Score=279.90 Aligned_cols=231 Identities=26% Similarity=0.352 Sum_probs=188.3
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
+|++.+.||.|+||.||.++...+++.+++|.+...... ..+.+|+.++++++|+||+++++++.... ..++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-~~~~~~e 79 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDN-TLLIEME 79 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCC-eEEEEEE
Confidence 589999999999999999999999999999998654322 23467999999999999999999998754 8999999
Q ss_pred ccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce--------------
Q 040812 134 YMDAGSLEIYVKSR--GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS-------------- 197 (300)
Q Consensus 134 ~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~-------------- 197 (300)
|+++++|.+++... ..+++..+..++.|++.||.|||+.|++|+||+|+||+++.++..++.++
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (256)
T cd08221 80 YANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAE 159 (256)
T ss_pred ecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEccccccccc
Confidence 99999999999764 46899999999999999999999999999999999999998765433221
Q ss_pred -----eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHH
Q 040812 198 -----CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDF 272 (300)
Q Consensus 198 -----~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 272 (300)
..|.+||... +..++.++|||||||++|+|++|..||...... +....+........+...+.++.++
T Consensus 160 ~~~~~~~y~ape~~~---~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (256)
T cd08221 160 TVVGTPYYMSPELCQ---GVKYNFKSDIWALGCVLYELLTLKRTFDATNPL----NLVVKIVQGNYTPVVSVYSSELISL 232 (256)
T ss_pred ccCCCccccCHhhcC---CCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHH----HHHHHHHcCCCCCCccccCHHHHHH
Confidence 2233344332 344667899999999999999999999654322 2232333333344456678999999
Q ss_pred HHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 273 IRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 273 i~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
|.+||.. ||++||++.++++|||+
T Consensus 233 i~~~l~~-~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 233 VHSLLQQ-DPEKRPTADEVLDQPLL 256 (256)
T ss_pred HHHHccc-CcccCCCHHHHhhCcCC
Confidence 9999999 99999999999999996
No 186
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=5.1e-41 Score=287.62 Aligned_cols=235 Identities=30% Similarity=0.459 Sum_probs=185.7
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILM 132 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~ 132 (300)
++|++.+.||+|+||.||+|.++.+++.||+|.++..... ..+.+|+.++++++|+||+++++++.... ..++||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~iv~ 79 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKG-RLYLVF 79 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECC-EEEEEE
Confidence 4689999999999999999999999999999998653322 23467999999999999999999998754 899999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc----------------
Q 040812 133 EYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY---------------- 196 (300)
Q Consensus 133 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~---------------- 196 (300)
||++++.+..+......+++..+..++.|++.||.|||+.|++|+||+|+||+++.++...+.+
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~ 159 (288)
T cd07833 80 EYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLT 159 (288)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcccccc
Confidence 9999988877776666799999999999999999999999999999999999999875543322
Q ss_pred ----eeeccccccccccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCC--------------
Q 040812 197 ----SCLYESGEARHRKHGG-YNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFRE-------------- 257 (300)
Q Consensus 197 ----~~~~~~~~~~~~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~-------------- 257 (300)
...|.+||... +. .++.++||||||+++|+|++|..||.............. .....
T Consensus 160 ~~~~~~~~~~PE~~~---~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07833 160 DYVATRWYRAPELLV---GDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQK-CLGPLPPSHQELFSSNPRF 235 (288)
T ss_pred CcccccCCcCCchhc---CCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH-HhCCCCHHHhhhcccCccc
Confidence 22345555543 23 567899999999999999999999965432211111111 00000
Q ss_pred ------C--------CCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 258 ------P--------PSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 258 ------~--------~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
. ...+..++.++.++|.+||.. ||++||+++++++||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~-~p~~Rps~~~il~~~~f 288 (288)
T cd07833 236 AGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRM-DPKERLTCDELLQHPYF 288 (288)
T ss_pred cccccCCCCCcHHHHHhcCCccchHHHHHHHHHhcc-CchhcccHHHHhcCCCC
Confidence 0 012334578899999999999 99999999999999998
No 187
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=5.9e-41 Score=286.98 Aligned_cols=236 Identities=28% Similarity=0.419 Sum_probs=183.3
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
+|++.+.||+|+||.||+|.+..+++.||+|.+...... ..+.+|+.++++++|+||+++++++.... ..|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-~~~~v~e 79 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGS-GFVLVME 79 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCC-eeEEEec
Confidence 589999999999999999999999999999998764422 23467999999999999999999988754 8999999
Q ss_pred ccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc----------------
Q 040812 134 YMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY---------------- 196 (300)
Q Consensus 134 ~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~---------------- 196 (300)
|+ +++|.+++.. ...+++..++.++.||+.||.|||+.|++|+||||+||+++.++...+.+
T Consensus 80 ~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~ 158 (286)
T cd07832 80 YM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYS 158 (286)
T ss_pred cc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccc
Confidence 99 9999999865 44689999999999999999999999999999999999998765432221
Q ss_pred ----eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhC----------------
Q 040812 197 ----SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFR---------------- 256 (300)
Q Consensus 197 ----~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~---------------- 256 (300)
+..|.+||.... ...++.++|||||||++|||+||.+||...................
T Consensus 159 ~~~~~~~y~aPE~~~~--~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (286)
T cd07832 159 HQVATRWYRAPELLYG--ARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNK 236 (286)
T ss_pred cccCcccccCceeeec--cccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhc
Confidence 223445554321 2345779999999999999999988885543322221111111000
Q ss_pred ----CCC-----CCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCC
Q 040812 257 ----EPP-----SLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLA 298 (300)
Q Consensus 257 ----~~~-----~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~ 298 (300)
... ......+..+.++|.+||.. ||++|||++++++||||.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~-~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 237 ITFPESKPIPLEEIFPDASPEALDLLKGLLVY-DPSKRLSAAEALRHPYFT 286 (286)
T ss_pred ccCCCCCcchHHHhCCCccHHHHHHHHHHhcc-ChhhCCCHHHHhhCcCcC
Confidence 000 01123568899999999999 999999999999999994
No 188
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=4.9e-41 Score=284.04 Aligned_cols=228 Identities=26% Similarity=0.367 Sum_probs=186.3
Q ss_pred ecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEeccCCCC
Q 040812 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGS 139 (300)
Q Consensus 65 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~~~ 139 (300)
||.|+||.||+|.+..+++.+|+|++...... ..+.+|+.++++++|+||+++++.+..+. ..|+||||+++++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e~~~~~~ 79 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKK-YIYMLMEYCLGGE 79 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCC-ccEEEEecCCCCc
Confidence 69999999999999999999999998754322 23457999999999999999999987754 8999999999999
Q ss_pred HHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc------------------eeecc
Q 040812 140 LEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY------------------SCLYE 201 (300)
Q Consensus 140 L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~------------------~~~~~ 201 (300)
|.+++.....+++..+..++.||+.||.|||++|++|+||+|+||+++.++...+.+ ...|.
T Consensus 80 L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~ 159 (262)
T cd05572 80 LWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYV 159 (262)
T ss_pred HHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcCcc
Confidence 999998877899999999999999999999999999999999999998765432221 22345
Q ss_pred ccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHh-hCCCCCCCCCCChHHHHHHHHHhccC
Q 040812 202 SGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAIC-FREPPSLPECSSEKFRDFIRCCLQKG 280 (300)
Q Consensus 202 ~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~ 280 (300)
+||... +..++.++|+||||+++|+|++|..||...... ......... .......|...++++.++|.+||..
T Consensus 160 ~PE~~~---~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~- 233 (262)
T cd05572 160 APEIIL---NKGYDFSVDYWSLGILLYELLTGRPPFGEDDED--PMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRR- 233 (262)
T ss_pred ChhHhc---CCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCC--HHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccC-
Confidence 555433 344677999999999999999999999765431 122222222 2445566666789999999999999
Q ss_pred CCCCCCC-----HHHHhcCCCCCC
Q 040812 281 DPSKRWT-----ASQLLSHPFLAD 299 (300)
Q Consensus 281 dp~~Rpt-----~~~~l~hpw~~~ 299 (300)
||++||+ +.|+++||||++
T Consensus 234 ~p~~R~~~~~~~~~~l~~~~~~~~ 257 (262)
T cd05572 234 NPEERLGNLKGGIKDIKKHKWFNG 257 (262)
T ss_pred ChhhCcCCcccCHHHHhcChhhhC
Confidence 9999999 999999999975
No 189
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=5.6e-41 Score=288.36 Aligned_cols=239 Identities=24% Similarity=0.368 Sum_probs=185.1
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC----CCHHHHHHHHhcCCCceeEeceeeeCCC-CcEE
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP----PNPQELNILRQTNSPYIVKCHQIFTKPS-GEVS 129 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~ 129 (300)
..++|++.+.||+|+||.||+|.++.+++.+|+|.++...... .+.+|+.++++++||||+++++++.... +..|
T Consensus 3 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (293)
T cd07843 3 SVDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIY 82 (293)
T ss_pred chhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEE
Confidence 3467999999999999999999999999999999997544332 2357999999999999999999876542 4899
Q ss_pred EEEeccCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce-----------
Q 040812 130 ILMEYMDAGSLEIYVKSRG-RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS----------- 197 (300)
Q Consensus 130 lv~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~----------- 197 (300)
+||||+.+ +|.+++.... .+++..++.++.|++.||.|||++|++|+||||+||+++.++...+.++
T Consensus 83 lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~ 161 (293)
T cd07843 83 MVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLK 161 (293)
T ss_pred EEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCcc
Confidence 99999975 9998887643 5899999999999999999999999999999999999998765433221
Q ss_pred --------eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHh---------------
Q 040812 198 --------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAIC--------------- 254 (300)
Q Consensus 198 --------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~--------------- 254 (300)
..|.+||.... ....+.++|||||||++|+|++|..||...........+.....
T Consensus 162 ~~~~~~~~~~~~aPE~~~~--~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (293)
T cd07843 162 PYTQLVVTLWYRAPELLLG--AKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPG 239 (293)
T ss_pred ccccccccccccCchhhcC--CccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccch
Confidence 22445554321 12346789999999999999999999975443222211111100
Q ss_pred -----------hCCCCCCCCC-CChHHHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 255 -----------FREPPSLPEC-SSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 255 -----------~~~~~~~~~~-~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
......++.. .++.+.++|.+||+. ||++|||+.|+++||||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~-~p~~R~t~~ell~~~~f 293 (293)
T cd07843 240 AKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTY-DPAKRISAEDALKHPYF 293 (293)
T ss_pred hcccccccccchhhhccccccCCChHHHHHHHHHhcc-CccccCCHHHHhcCCCC
Confidence 0001122333 578899999999999 99999999999999998
No 190
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-43 Score=324.72 Aligned_cols=240 Identities=32% Similarity=0.430 Sum_probs=201.9
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecC-----CCCCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEE
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCD-----RGTPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVS 129 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 129 (300)
..++|++++.||+|+||.|.+++.+.+++.||+|++.+. ....-|..|-.+|..-+.+=|+.++..|.++. ++|
T Consensus 73 ~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~-~LY 151 (1317)
T KOG0612|consen 73 KAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDER-YLY 151 (1317)
T ss_pred CHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCcc-ceE
Confidence 457899999999999999999999999999999999763 22334577899999989999999999999876 999
Q ss_pred EEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCc---------------
Q 040812 130 ILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPC--------------- 194 (300)
Q Consensus 130 lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~--------------- 194 (300)
+||||++||+|-.++....+++++.++.++..|+.||.-||+.|+|||||||+|||+|..|..+.
T Consensus 152 lVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V 231 (1317)
T KOG0612|consen 152 LVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTV 231 (1317)
T ss_pred EEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCCCcE
Confidence 99999999999999998889999999999999999999999999999999999999998876532
Q ss_pred -----cceeecccccccccc-CC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCC--CCC
Q 040812 195 -----GYSCLYESGEARHRK-HG-GYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLP--ECS 265 (300)
Q Consensus 195 -----~~~~~~~~~~~~~~~-~~-~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 265 (300)
.+++-|.+||..... .+ +.|+..+|+||+||++|||+.|..||....-...+-+++.. .....+| ..+
T Consensus 232 ~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~h---k~~l~FP~~~~V 308 (1317)
T KOG0612|consen 232 RSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNH---KESLSFPDETDV 308 (1317)
T ss_pred EeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhch---hhhcCCCccccc
Confidence 235557777776533 34 67899999999999999999999999765443344444433 2233444 458
Q ss_pred ChHHHHHHHHHhccCCCCCCCC---HHHHhcCCCCCCC
Q 040812 266 SEKFRDFIRCCLQKGDPSKRWT---ASQLLSHPFLADA 300 (300)
Q Consensus 266 ~~~l~~li~~~l~~~dp~~Rpt---~~~~l~hpw~~~~ 300 (300)
|+++++||.+++. +|+.|.. ++++.+||||.++
T Consensus 309 SeeakdLI~~ll~--~~e~RLgrngiedik~HpFF~g~ 344 (1317)
T KOG0612|consen 309 SEEAKDLIEALLC--DREVRLGRNGIEDIKNHPFFEGI 344 (1317)
T ss_pred CHHHHHHHHHHhc--ChhhhcccccHHHHHhCccccCC
Confidence 9999999999986 6999998 9999999999874
No 191
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.1e-41 Score=290.48 Aligned_cols=232 Identities=35% Similarity=0.557 Sum_probs=187.9
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
+.|+..+.||+|+||.||+|.+..+++.||+|.+...... ..+.+|+.++++++|+||+++++++.... ..|+|||
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e 82 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGT-KLWIIME 82 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCC-ceEEEEE
Confidence 3478889999999999999999999999999998644322 23467999999999999999999988754 8999999
Q ss_pred ccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-----------------
Q 040812 134 YMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY----------------- 196 (300)
Q Consensus 134 ~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~----------------- 196 (300)
|+++++|.+++.. +.+++..+..++.|++.||.|||++|++|+||+|+||+++.++...+.+
T Consensus 83 ~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~ 161 (277)
T cd06642 83 YLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF 161 (277)
T ss_pred ccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcchhhhcc
Confidence 9999999998864 4689999999999999999999999999999999999998776543322
Q ss_pred --eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHH
Q 040812 197 --SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIR 274 (300)
Q Consensus 197 --~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 274 (300)
...|.+||... +..++.++|||||||++|||+||..||....... ..........+..+...+..+.++|.
T Consensus 162 ~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~li~ 234 (277)
T cd06642 162 VGTPFWMAPEVIK---QSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR----VLFLIPKNSPPTLEGQYSKPFKEFVE 234 (277)
T ss_pred cCcccccCHHHhC---cCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh----HHhhhhcCCCCCCCcccCHHHHHHHH
Confidence 22244454432 4456779999999999999999999996543221 12222223344555567889999999
Q ss_pred HHhccCCCCCCCCHHHHhcCCCCC
Q 040812 275 CCLQKGDPSKRWTASQLLSHPFLA 298 (300)
Q Consensus 275 ~~l~~~dp~~Rpt~~~~l~hpw~~ 298 (300)
+||.. +|++||++.++++||||.
T Consensus 235 ~~l~~-~p~~Rp~~~~il~~~~~~ 257 (277)
T cd06642 235 ACLNK-DPRFRPTAKELLKHKFIT 257 (277)
T ss_pred HHccC-CcccCcCHHHHHHhHHHH
Confidence 99999 999999999999999986
No 192
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=4e-41 Score=286.11 Aligned_cols=238 Identities=34% Similarity=0.511 Sum_probs=187.5
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-CCCHHHHHHHHhc-CCCceeEeceeeeCCC-----Cc
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-PPNPQELNILRQT-NSPYIVKCHQIFTKPS-----GE 127 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~E~~~l~~l-~h~niv~~~~~~~~~~-----~~ 127 (300)
..++|++.+.||+|+||.||+|.++.+++.+++|++...... ..+.+|+.+++++ +|+||+++++++.... ..
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~ 83 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQ 83 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceE
Confidence 457899999999999999999999988999999998754432 3346799999998 6999999999986432 24
Q ss_pred EEEEEeccCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-------
Q 040812 128 VSILMEYMDAGSLEIYVKS----RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY------- 196 (300)
Q Consensus 128 ~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~------- 196 (300)
.|+||||+++++|.+++.. ...+++..++.++.|++.||.|||+.|++|+||+|+||+++.++...+..
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~ 163 (275)
T cd06608 84 LWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQL 163 (275)
T ss_pred EEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccceec
Confidence 8999999999999998865 34789999999999999999999999999999999999999775443221
Q ss_pred ------------eeeccccccccc--cCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCC-
Q 040812 197 ------------SCLYESGEARHR--KHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL- 261 (300)
Q Consensus 197 ------------~~~~~~~~~~~~--~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~- 261 (300)
+..|.+||.... .....++.++|||||||++|+|+||..||.......... .......+..
T Consensus 164 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~----~~~~~~~~~~~ 239 (275)
T cd06608 164 DSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALF----KIPRNPPPTLK 239 (275)
T ss_pred ccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHH----HhhccCCCCCC
Confidence 223556664322 112345678999999999999999999996543322222 2222222222
Q ss_pred -CCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 262 -PECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 262 -~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
+...++.+.++|.+||.. ||++|||+.++++|||+
T Consensus 240 ~~~~~~~~~~~li~~~l~~-dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 240 SPENWSKKFNDFISECLIK-NYEQRPFMEELLEHPFI 275 (275)
T ss_pred chhhcCHHHHHHHHHHhhc-ChhhCcCHHHHhcCCCC
Confidence 234678999999999999 99999999999999996
No 193
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=1e-41 Score=297.67 Aligned_cols=234 Identities=27% Similarity=0.360 Sum_probs=177.9
Q ss_pred eeecCC--cceEEEEEEEccCCeEEEEEEeecCCCC----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEeccC
Q 040812 63 QVLGQG--NGGTVFKVRHKQTLALYALKVMQCDRGT----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMD 136 (300)
Q Consensus 63 ~~lg~G--~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~ 136 (300)
..||+| +||+||++++..+++.||+|++...... ..+.+|+.+++.++||||+++++++.... ..|+||||+.
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~-~~~~v~e~~~ 82 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGS-WLWVISPFMA 82 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCC-ceEEEEeccc
Confidence 456666 9999999999999999999998754322 23356888888999999999999998764 8999999999
Q ss_pred CCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc------------------
Q 040812 137 AGSLEIYVKSR--GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY------------------ 196 (300)
Q Consensus 137 ~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~------------------ 196 (300)
+++|.+++... ..+++..+..++.||+.||.|||++|++||||||+||+++.++...+.+
T Consensus 83 ~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (328)
T cd08226 83 YGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVY 162 (328)
T ss_pred CCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccc
Confidence 99999998764 3589999999999999999999999999999999999998764332211
Q ss_pred --------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHh--------------
Q 040812 197 --------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAIC-------------- 254 (300)
Q Consensus 197 --------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~-------------- 254 (300)
...|.+||..... ...++.++|||||||++|||++|..||.................
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (328)
T cd08226 163 DFPQFSTSVLPWLSPELLRQD-LYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEES 241 (328)
T ss_pred cccccccCccCccChhhhcCC-CCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhh
Confidence 1125566654321 12357799999999999999999999965433222111110000
Q ss_pred ----------------------------hCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 255 ----------------------------FREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 255 ----------------------------~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
.......+...++.+.+||.+||.. ||++|||++++++||||++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~-dP~~Rpta~e~l~~~~~~~ 313 (328)
T cd08226 242 RMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQ-DPEKRPSASSLLSHAFFKQ 313 (328)
T ss_pred hhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccC-CcccCCCHHHHhhCHHHHH
Confidence 0000111223567899999999999 9999999999999999974
No 194
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.1e-40 Score=284.02 Aligned_cols=239 Identities=37% Similarity=0.615 Sum_probs=185.8
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCC-CCcEEEEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKP-SGEVSILM 132 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~~lv~ 132 (300)
++|+..+.||.|++|.||+|.+..+++.+|+|.+...... ..+.+|++++++++|+||+++++++... .+..|+||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 4688999999999999999999999999999998754332 2346799999999999999999987543 34689999
Q ss_pred eccCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce-----------
Q 040812 133 EYMDAGSLEIYVKS----RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS----------- 197 (300)
Q Consensus 133 e~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~----------- 197 (300)
||+++++|.+++.. ...+++..+..++.||+.||.|||+.|++|+||+|+||+++.++...+..+
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 160 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLA 160 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeecccccccccccc
Confidence 99999999988753 345899999999999999999999999999999999999987754433222
Q ss_pred ------eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCC-chHHHHHHHHhhCCCCCCC------CC
Q 040812 198 ------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQE-PDFLSLMLAICFREPPSLP------EC 264 (300)
Q Consensus 198 ------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~------~~ 264 (300)
..|.+||.. .+..++.++|||||||++|+|+||..||...... ....+..........+.++ ..
T Consensus 161 ~~~~~~~~y~~pE~~---~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (287)
T cd06621 161 GTFTGTSFYMAPERI---QGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIK 237 (287)
T ss_pred ccccCCccccCHHHh---cCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCc
Confidence 223344433 2445677999999999999999999999765321 1112222222222222222 12
Q ss_pred CChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 265 SSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 265 ~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
.++.+.++|.+||.. ||++|||+.|+++||||.+
T Consensus 238 ~~~~~~~li~~~l~~-~p~~Rpt~~eil~~~~~~~ 271 (287)
T cd06621 238 WSEEFKDFIKQCLEK-DPTRRPTPWDMLEHPWIKA 271 (287)
T ss_pred hHHHHHHHHHHHcCC-CcccCCCHHHHHhCccccc
Confidence 357899999999999 9999999999999999975
No 195
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-41 Score=255.31 Aligned_cols=238 Identities=27% Similarity=0.470 Sum_probs=187.7
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC----CCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP----PNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILM 132 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~ 132 (300)
.+|..+++||+|+||+||+++++++++.||+|.++.+...+ ...+|+-+++.++|.|||+++++...+. .+-+|+
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdk-kltlvf 80 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDK-KLTLVF 80 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCc-eeEEeH
Confidence 35778899999999999999999999999999998765443 3478999999999999999999988765 899999
Q ss_pred eccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccceee------------
Q 040812 133 EYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCL------------ 199 (300)
Q Consensus 133 e~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~~------------ 199 (300)
|||.. +|..+... ++.++...++.++.|++.||.|+|++++.|||+||.|.||+.++..+...+++
T Consensus 81 e~cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvrcys 159 (292)
T KOG0662|consen 81 EFCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYS 159 (292)
T ss_pred HHhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEeee
Confidence 99965 99988876 67799999999999999999999999999999999999999998765443333
Q ss_pred -------ccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCC-----------
Q 040812 200 -------YESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPS----------- 260 (300)
Q Consensus 200 -------~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~----------- 260 (300)
|.+|..... ...|+.+.|+||-|||+.|+.. |++.|.+.+.......+...........
T Consensus 160 aevvtlwyrppdvlfg--akly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk 237 (292)
T KOG0662|consen 160 AEVVTLWYRPPDVLFG--AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYK 237 (292)
T ss_pred ceeeeeeccCcceeee--eehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCc
Confidence 233333221 2456789999999999999985 6666765554444444443322111111
Q ss_pred ----CC---------CCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 261 ----LP---------ECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 261 ----~~---------~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
+| ...+..-+|+++++|.- +|.+|++++++++||||.+
T Consensus 238 ~yp~ypattswsqivp~lns~grdllqkll~c-np~qrisaeaalqhpyf~d 288 (292)
T KOG0662|consen 238 PYPIYPATTSWSQIVPKLNSTGRDLLQKLLKC-NPAQRISAEAALQHPYFSD 288 (292)
T ss_pred ccCCccccchHHHHhhhhcchhHHHHHHHhcc-CcccccCHHHHhcCccccc
Confidence 11 11134578999999999 9999999999999999987
No 196
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=7.3e-41 Score=285.40 Aligned_cols=232 Identities=35% Similarity=0.539 Sum_probs=188.4
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEec
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEY 134 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~ 134 (300)
-|++.+.||+|+||.||+|.+..+++.||+|.+...... ..+.+|+.++++++|+||+++++.+.... ..|+||||
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~e~ 83 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT-KLWIIMEY 83 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCC-eEEEEEEe
Confidence 377889999999999999999989999999987643322 23457999999999999999999988754 89999999
Q ss_pred cCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce-----------------
Q 040812 135 MDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS----------------- 197 (300)
Q Consensus 135 ~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~----------------- 197 (300)
+++++|.+++.. ..+++..+..++.|++.|+.+||+.|++|+||||+||+++.++...+.++
T Consensus 84 ~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 162 (277)
T cd06641 84 LGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV 162 (277)
T ss_pred CCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchhhhcccc
Confidence 999999999864 46899999999999999999999999999999999999998765433222
Q ss_pred --eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHH
Q 040812 198 --CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275 (300)
Q Consensus 198 --~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 275 (300)
..|.+||... +...+.++|+|||||++|+|++|..||...... .....+.....+..+..++.++.+++.+
T Consensus 163 ~~~~y~~PE~~~---~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 235 (277)
T cd06641 163 GTPFWMAPEVIK---QSAYDSKADIWSLGITAIELAKGEPPHSELHPM----KVLFLIPKNNPPTLEGNYSKPLKEFVEA 235 (277)
T ss_pred CCccccChhhhc---cCCCCchhhHHHHHHHHHHHHcCCCCCCccchH----HHHHHHhcCCCCCCCcccCHHHHHHHHH
Confidence 1234444332 345567899999999999999999999653321 2222233344555666788999999999
Q ss_pred HhccCCCCCCCCHHHHhcCCCCCC
Q 040812 276 CLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 276 ~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
||.. +|++||++.++++||||.+
T Consensus 236 ~l~~-~p~~Rp~~~~~l~~~~~~~ 258 (277)
T cd06641 236 CLNK-EPSFRPTAKELLKHKFIVR 258 (277)
T ss_pred HccC-ChhhCcCHHHHHhCHHHhh
Confidence 9999 9999999999999999975
No 197
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=4.4e-41 Score=287.47 Aligned_cols=230 Identities=24% Similarity=0.357 Sum_probs=185.9
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCC-----eEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCc
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTL-----ALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGE 127 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 127 (300)
.++|++.+.||+|+||.||+|.....+ ..||+|.++..... ..+.+|+.++.+++||||+++++++.... .
T Consensus 4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~-~ 82 (283)
T cd05048 4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQ-P 82 (283)
T ss_pred hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCC-c
Confidence 467899999999999999999986654 68999988644321 22467999999999999999999987654 8
Q ss_pred EEEEEeccCCCCHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCC
Q 040812 128 VSILMEYMDAGSLEIYVKSR----------------GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKME 191 (300)
Q Consensus 128 ~~lv~e~~~~~~L~~~l~~~----------------~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~ 191 (300)
.|++|||+++++|.+++... ..+++..+..++.|++.||.|||++|++|+||||+||+++.++.
T Consensus 83 ~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~ 162 (283)
T cd05048 83 TCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLT 162 (283)
T ss_pred eEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCc
Confidence 99999999999999999754 35788999999999999999999999999999999999998765
Q ss_pred CCccce---------------------eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHH
Q 040812 192 HPCGYS---------------------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSL 249 (300)
Q Consensus 192 ~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~ 249 (300)
..+.++ ..|.+||... ++.++.++|||||||++|||+| |..||...... ..
T Consensus 163 ~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~----~~ 235 (283)
T cd05048 163 VKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAIL---YGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ----EV 235 (283)
T ss_pred EEECCCcceeeccccccccccCCCcccccccCHHHhc---cCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH----HH
Confidence 432221 1245555432 4456789999999999999998 99999764432 23
Q ss_pred HHHHhhCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcC
Q 040812 250 MLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~h 294 (300)
...+........+..+++.+.+++.+||+. ||++||++.+++++
T Consensus 236 ~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~-~p~~Rp~~~~i~~~ 279 (283)
T cd05048 236 IEMIRSRQLLPCPEDCPARVYALMIECWNE-IPARRPRFKDIHTR 279 (283)
T ss_pred HHHHHcCCcCCCcccCCHHHHHHHHHHccC-ChhhCcCHHHHHHH
Confidence 333334455566778899999999999999 99999999999875
No 198
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=9.7e-41 Score=285.29 Aligned_cols=237 Identities=32% Similarity=0.496 Sum_probs=182.9
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC---CCHHHHHH-HHhcCCCceeEeceeeeCCCCcEEEEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP---PNPQELNI-LRQTNSPYIVKCHQIFTKPSGEVSILM 132 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~~lv~ 132 (300)
++|++.+.||+|+||.||++.++.+++.||+|.++...... ....|+.. ++.++|+||+++++++..+. ..|+||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~-~~~lv~ 79 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREG-DVWICM 79 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCC-cEEEEh
Confidence 46899999999999999999999999999999987543221 12345554 56678999999999988654 899999
Q ss_pred eccCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHhHhC-CccccCCCCCceeecCCCCCCccc-----------
Q 040812 133 EYMDAGSLEIYVKS----RGRLSEDIICTISRQVLKGLFYMHSR-NIVHRDIKPANVLINEKMEHPCGY----------- 196 (300)
Q Consensus 133 e~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~lH~~-~i~H~Dlkp~Nill~~~~~~~~~~----------- 196 (300)
||++ ++|.+++.. ...+++..++.++.||+.||.|||++ +++||||||+||+++.++...+.+
T Consensus 80 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~ 158 (283)
T cd06617 80 EVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSV 158 (283)
T ss_pred hhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccccccccccc
Confidence 9997 488877754 23689999999999999999999997 999999999999998775543322
Q ss_pred -------eeeccccccccccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCC-CCCCh
Q 040812 197 -------SCLYESGEARHRKHG-GYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLP-ECSSE 267 (300)
Q Consensus 197 -------~~~~~~~~~~~~~~~-~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 267 (300)
+..|.+||....... ..++.++|+|||||++|+|++|+.||....... +..........+..+ ..+++
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 235 (283)
T cd06617 159 AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPF---QQLKQVVEEPSPQLPAEKFSP 235 (283)
T ss_pred ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCH---HHHHHHHhcCCCCCCccccCH
Confidence 222455554432111 345779999999999999999999996533221 222222223333333 35789
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 268 KFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 268 ~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
++.++|.+||.. +|++||++.++++||||..
T Consensus 236 ~l~~li~~~l~~-~p~~Rp~~~~il~~~~~~~ 266 (283)
T cd06617 236 EFQDFVNKCLKK-NYKERPNYPELLQHPFFEL 266 (283)
T ss_pred HHHHHHHHHccC-ChhhCcCHHHHhcCchhhh
Confidence 999999999999 9999999999999999975
No 199
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.7e-40 Score=279.86 Aligned_cols=228 Identities=23% Similarity=0.368 Sum_probs=183.3
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEec
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEY 134 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~ 134 (300)
.++|++.+.||+|+||.||++.++. +..+|+|.+...... ..+.+|+.++++++||||+++++++.... ..|+||||
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~iv~e~ 80 (256)
T cd05114 3 PSELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQK-PLYIVTEF 80 (256)
T ss_pred HHHcEEeeEecCCcCceEEEEEecc-CceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCC-CEEEEEEc
Confidence 4678999999999999999998865 457899987644322 34567999999999999999999987654 89999999
Q ss_pred cCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce----------------
Q 040812 135 MDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS---------------- 197 (300)
Q Consensus 135 ~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~---------------- 197 (300)
+++|+|.+++.. .+.+++..+..++.|++.||.|||++|++||||||+||+++.++...++++
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~ 160 (256)
T cd05114 81 MENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSG 160 (256)
T ss_pred CCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCC
Confidence 999999999875 346899999999999999999999999999999999999987754332221
Q ss_pred ----eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHH
Q 040812 198 ----CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDF 272 (300)
Q Consensus 198 ----~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 272 (300)
..|.+||... +..++.++||||||+++|||+| |+.||..... .+....+........+...+..+.++
T Consensus 161 ~~~~~~y~aPE~~~---~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~l 233 (256)
T cd05114 161 AKFPVKWSPPEVFN---FSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN----YEVVEMISRGFRLYRPKLASMTVYEV 233 (256)
T ss_pred CCCchhhCChhhcc---cCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH----HHHHHHHHCCCCCCCCCCCCHHHHHH
Confidence 1244454432 4456789999999999999999 9999965432 23333333344455566778899999
Q ss_pred HHHHhccCCCCCCCCHHHHhc
Q 040812 273 IRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 273 i~~~l~~~dp~~Rpt~~~~l~ 293 (300)
+.+||.. ||++||+++++++
T Consensus 234 i~~c~~~-~p~~Rps~~~l~~ 253 (256)
T cd05114 234 MYSCWHE-KPEGRPTFAELLR 253 (256)
T ss_pred HHHHccC-CcccCcCHHHHHH
Confidence 9999999 9999999999985
No 200
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=8.5e-41 Score=284.84 Aligned_cols=233 Identities=30% Similarity=0.514 Sum_probs=185.9
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC---CCCHHHHHHHHhcC---CCceeEeceeeeCCCCcEEEE
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT---PPNPQELNILRQTN---SPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~~lv 131 (300)
.|++.+.||+|+||.||+|.+..+++.||+|.+...... ..+.+|+.++++++ |||++++++++.... ..|+|
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~-~~~lv 80 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGP-RLWII 80 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCC-EEEEE
Confidence 478889999999999999999999999999998654322 22456888998886 999999999987654 89999
Q ss_pred EeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce--------------
Q 040812 132 MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS-------------- 197 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~-------------- 197 (300)
|||+++++|.+++... .+++..+..++.|++.||.|||+.|++|+||+|+||+++.++...+..+
T Consensus 81 ~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (277)
T cd06917 81 MEYAEGGSVRTLMKAG-PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRS 159 (277)
T ss_pred EecCCCCcHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCccccc
Confidence 9999999999998664 7899999999999999999999999999999999999997655432221
Q ss_pred -----eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCC-CCChHHHH
Q 040812 198 -----CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPE-CSSEKFRD 271 (300)
Q Consensus 198 -----~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~ 271 (300)
..|.+||... .+..++.++|+|||||++|+|++|..||...... ..........++.++. ..+.++.+
T Consensus 160 ~~~~~~~y~aPE~~~--~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (277)
T cd06917 160 TFVGTPYWMAPEVIT--EGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF----RAMMLIPKSKPPRLEDNGYSKLLRE 233 (277)
T ss_pred cccCCcceeCHHHhc--cCCccccchhHHHHHHHHHHHHhCCCCCCCCChh----hhhhccccCCCCCCCcccCCHHHHH
Confidence 1244555432 1334577999999999999999999999654322 1121122223334443 37789999
Q ss_pred HHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 272 FIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 272 li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
++.+||.. ||++||++.++++|+||++
T Consensus 234 ~i~~~l~~-~p~~R~~~~~il~~~~~~~ 260 (277)
T cd06917 234 FVAACLDE-EPKERLSAEELLKSKWIKA 260 (277)
T ss_pred HHHHHcCC-CcccCcCHHHHhhChHhhc
Confidence 99999999 9999999999999999965
No 201
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1.4e-40 Score=282.31 Aligned_cols=236 Identities=32% Similarity=0.480 Sum_probs=184.2
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC--CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEec
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEY 134 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~ 134 (300)
++......||+|+||.||+|.+..++..||+|.+...... ..+.+|+.++++++|+||+++++++.... ..++|+||
T Consensus 8 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~e~ 86 (268)
T cd06624 8 DENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENG-FFKIFMEQ 86 (268)
T ss_pred ccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCC-EEEEEEec
Confidence 3344456899999999999999999999999987654322 23467999999999999999999987754 89999999
Q ss_pred cCCCCHHHHHHhC-CCC--CHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCC-CCCCcc---------------
Q 040812 135 MDAGSLEIYVKSR-GRL--SEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEK-MEHPCG--------------- 195 (300)
Q Consensus 135 ~~~~~L~~~l~~~-~~l--~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~-~~~~~~--------------- 195 (300)
+++++|.+++... ..+ ++..+..++.||+.||.|||++||+||||||+||+++.. +...+.
T Consensus 87 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~ 166 (268)
T cd06624 87 VPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCT 166 (268)
T ss_pred CCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCcc
Confidence 9999999999764 445 888899999999999999999999999999999999752 222111
Q ss_pred ----ceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHH
Q 040812 196 ----YSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRD 271 (300)
Q Consensus 196 ----~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (300)
+...|.+||..... ...++.++||||||+++|+|++|..||........ ...........+.++...++++.+
T Consensus 167 ~~~~~~~~~~aPE~~~~~-~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 243 (268)
T cd06624 167 ETFTGTLQYMAPEVIDKG-PRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA--AMFKVGMFKIHPEIPESLSAEAKN 243 (268)
T ss_pred ccCCCCccccChhhhccc-cccCCchhhhHHHHHHHHHHHhCCCCCccccChhh--hHhhhhhhccCCCCCcccCHHHHH
Confidence 12334555554211 12356799999999999999999999965432211 111112223445667778899999
Q ss_pred HHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 272 FIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 272 li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
++.+||.. +|++|||+.+++.||||
T Consensus 244 li~~~l~~-~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 244 FILRCFEP-DPDKRASAHDLLQDPFL 268 (268)
T ss_pred HHHHHcCC-CchhCCCHHHHHhCCCC
Confidence 99999999 99999999999999997
No 202
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.9e-40 Score=283.62 Aligned_cols=235 Identities=27% Similarity=0.463 Sum_probs=183.3
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEec
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEY 134 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~ 134 (300)
+|++.+.||+|++|.||+|.+..+++.||+|.++..... ....+|+.++++++|+||+++++++.... ..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e~ 79 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTEN-KLMLVFEY 79 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCC-cEEEEEec
Confidence 589999999999999999999999999999998754322 23357999999999999999999988764 89999999
Q ss_pred cCCCCHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc---------------
Q 040812 135 MDAGSLEIYVKSR---GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY--------------- 196 (300)
Q Consensus 135 ~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~--------------- 196 (300)
+++ +|.+++... ..+++..+..++.|++.||.|||+.|++|+||||+||++++++...+..
T Consensus 80 ~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~ 158 (284)
T cd07836 80 MDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFS 158 (284)
T ss_pred CCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccccc
Confidence 986 888888653 3589999999999999999999999999999999999998775443222
Q ss_pred ----eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHh----------hC---CCC
Q 040812 197 ----SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAIC----------FR---EPP 259 (300)
Q Consensus 197 ----~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~----------~~---~~~ 259 (300)
+..|.+||.... ...++.++|||||||++|+|++|..||...+.......+..... .. ...
T Consensus 159 ~~~~~~~y~~PE~~~~--~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd07836 159 NEVVTLWYRAPDVLLG--SRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKP 236 (284)
T ss_pred cccccccccChHHhcC--CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcc
Confidence 223455554321 23457799999999999999999999976544322222211100 00 000
Q ss_pred C-----------CCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 260 S-----------LPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 260 ~-----------~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
. .....+..++++|.+||+. ||++||++.++++||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~-~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 237 TFPRYPPQDLQQLFPHADPLGIDLLHRLLQL-NPELRISAHDALQHPWF 284 (284)
T ss_pred cccCCChHHHHHHhhhcCcHHHHHHHHHhcC-CcccCCCHHHHhcCCCC
Confidence 0 1123467899999999999 99999999999999998
No 203
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-42 Score=300.82 Aligned_cols=224 Identities=23% Similarity=0.410 Sum_probs=190.0
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEec
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEY 134 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~ 134 (300)
.++...-++.||+|+-|.||+|+.. ++.||||.++.-. .-+|+-|++|+|+||+.+.|+|.... .+||||||
T Consensus 122 PFe~IsELeWlGSGaQGAVF~Grl~--netVAVKKV~elk-----ETdIKHLRkLkH~NII~FkGVCtqsP-cyCIiMEf 193 (904)
T KOG4721|consen 122 PFEEISELEWLGSGAQGAVFLGRLH--NETVAVKKVRELK-----ETDIKHLRKLKHPNIITFKGVCTQSP-CYCIIMEF 193 (904)
T ss_pred CHHHhhhhhhhccCcccceeeeecc--CceehhHHHhhhh-----hhhHHHHHhccCcceeeEeeeecCCc-eeEEeeec
Confidence 3444455788999999999999987 6789999875332 23899999999999999999998876 79999999
Q ss_pred cCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCC------------------Cccc
Q 040812 135 MDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEH------------------PCGY 196 (300)
Q Consensus 135 ~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~------------------~~~~ 196 (300)
|..|.|...++....++......+.++|+.|+.|||.+.|||||||.-||||+.+... .+.+
T Consensus 194 Ca~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaG 273 (904)
T KOG4721|consen 194 CAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAG 273 (904)
T ss_pred cccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhh
Confidence 9999999999999899999999999999999999999999999999999999876443 2345
Q ss_pred eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhC-CCCCCCCCCChHHHHHHHH
Q 040812 197 SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFR-EPPSLPECSSEKFRDFIRC 275 (300)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~ 275 (300)
+..|++||... ....+.|+|||||||+|||||||+.||.+.+.. .++..+..+ .....|..+++.++-||++
T Consensus 274 TVaWMAPEvIr---nePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss----AIIwGVGsNsL~LpvPstcP~GfklL~Kq 346 (904)
T KOG4721|consen 274 TVAWMAPEVIR---NEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS----AIIWGVGSNSLHLPVPSTCPDGFKLLLKQ 346 (904)
T ss_pred hHhhhCHHHhh---cCCcccccceehhHHHHHHHHhcCCCccccchh----eeEEeccCCcccccCcccCchHHHHHHHH
Confidence 67788888765 456778999999999999999999999654433 444444333 2456788999999999999
Q ss_pred HhccCCCCCCCCHHHHhcC
Q 040812 276 CLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 276 ~l~~~dp~~Rpt~~~~l~h 294 (300)
||.. .|..||++.+++.|
T Consensus 347 cw~s-KpRNRPSFrqil~H 364 (904)
T KOG4721|consen 347 CWNS-KPRNRPSFRQILLH 364 (904)
T ss_pred HHhc-CCCCCccHHHHHHH
Confidence 9999 99999999999988
No 204
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=7.5e-41 Score=289.51 Aligned_cols=238 Identities=27% Similarity=0.400 Sum_probs=188.4
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEE
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVS 129 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 129 (300)
....|++.+.||+|+||.||+|.+..+++.||+|.+...... ..+.+|+.+++.++||||+++++++.... ..|
T Consensus 13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~-~~~ 91 (307)
T cd06607 13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREH-TAW 91 (307)
T ss_pred cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCC-eEE
Confidence 345699999999999999999999989999999998643322 12457999999999999999999988754 799
Q ss_pred EEEeccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc------------
Q 040812 130 ILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY------------ 196 (300)
Q Consensus 130 lv~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~------------ 196 (300)
+||||+.+ +|.+++.. ...+++..+..++.|++.||.|||+.|++|+||+|+||+++.++...++.
T Consensus 92 lv~e~~~g-~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~ 170 (307)
T cd06607 92 LVMEYCLG-SASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPANS 170 (307)
T ss_pred EEHHhhCC-CHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCCCC
Confidence 99999975 77776653 45689999999999999999999999999999999999999876543322
Q ss_pred ---eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCC-CCCCChHHHHH
Q 040812 197 ---SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL-PECSSEKFRDF 272 (300)
Q Consensus 197 ---~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~l 272 (300)
...|.+||.......+.++.++||||||+++|||+||..||...+.. ...........+.. +..+++.+.++
T Consensus 171 ~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l 246 (307)
T cd06607 171 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM----SALYHIAQNDSPTLSSNDWSDYFRNF 246 (307)
T ss_pred ccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHH----HHHHHHhcCCCCCCCchhhCHHHHHH
Confidence 23456666553323445678999999999999999999999654321 22222222233332 34567899999
Q ss_pred HHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 273 IRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 273 i~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
|.+||.. ||++||++.++++||||..
T Consensus 247 i~~~l~~-~p~~Rp~~~~il~~~~~~~ 272 (307)
T cd06607 247 VDSCLQK-IPQDRPSSEELLKHRFVLR 272 (307)
T ss_pred HHHHhcC-ChhhCcCHHHHhcChhhcc
Confidence 9999999 9999999999999999964
No 205
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=1.6e-40 Score=287.55 Aligned_cols=239 Identities=28% Similarity=0.422 Sum_probs=181.6
Q ss_pred CCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC----CCHHHHHHHHhcCCCceeEeceeeeCCC----
Q 040812 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP----PNPQELNILRQTNSPYIVKCHQIFTKPS---- 125 (300)
Q Consensus 54 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~E~~~l~~l~h~niv~~~~~~~~~~---- 125 (300)
..+++|++.+.||+|+||.||+|.+..+++.||+|.+....... ...+|+.++++++||||+++++++....
T Consensus 9 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (310)
T cd07865 9 DEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYN 88 (310)
T ss_pred chhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEeccccccc
Confidence 45678999999999999999999999999999999986543222 2356999999999999999999875432
Q ss_pred ---CcEEEEEeccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce----
Q 040812 126 ---GEVSILMEYMDAGSLEIYVKSR-GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS---- 197 (300)
Q Consensus 126 ---~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~---- 197 (300)
+..++||||+.+ +|.+++... ..+++..++.++.||+.||.|||++|++|+||||+||+++.++...+..+
T Consensus 89 ~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 167 (310)
T cd07865 89 RYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLAR 167 (310)
T ss_pred CCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCcc
Confidence 246999999975 788777654 36899999999999999999999999999999999999998765433221
Q ss_pred -------------------eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCC
Q 040812 198 -------------------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREP 258 (300)
Q Consensus 198 -------------------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 258 (300)
..|.+||.... ...++.++||||||+++|||+||..||...... .....+.......+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~-~~~~~~~~~~~~~~ 244 (310)
T cd07865 168 AFSLSKNSKPNRYTNRVVTLWYRPPELLLG--ERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQ-HQLTLISQLCGSIT 244 (310)
T ss_pred cccCCcccCCCCccCcccCccccCcHHhcC--CcccCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCC
Confidence 12455554321 123567999999999999999999999654322 11112222111100
Q ss_pred CC---------------C-------------CCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 259 PS---------------L-------------PECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 259 ~~---------------~-------------~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
+. . +...+..+.++|.+||.. ||++|||++++++||||
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~-~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 245 PEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVL-DPAKRIDADTALNHDFF 310 (310)
T ss_pred hhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcC-ChhhccCHHHHhcCCCC
Confidence 00 0 112356788999999999 99999999999999998
No 206
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=2.9e-40 Score=279.22 Aligned_cols=232 Identities=30% Similarity=0.432 Sum_probs=188.2
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC----CCHHHHHHHHhcCCCceeEeceeeeCC-CCcEEEEE
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP----PNPQELNILRQTNSPYIVKCHQIFTKP-SGEVSILM 132 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~~lv~ 132 (300)
+|++.+.||+|+||.||++.+..+++.||+|.+....... ...+|+.++++++|+||+++++++... ....|++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 4889999999999999999999999999999987543322 234689999999999999999977543 34689999
Q ss_pred eccCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHhH-----hCCccccCCCCCceeecCCCCCCccc-------
Q 040812 133 EYMDAGSLEIYVKS----RGRLSEDIICTISRQVLKGLFYMH-----SRNIVHRDIKPANVLINEKMEHPCGY------- 196 (300)
Q Consensus 133 e~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~lH-----~~~i~H~Dlkp~Nill~~~~~~~~~~------- 196 (300)
||+++++|.+++.. ...+++..++.++.||+.||.||| +.+++|+||||+||+++.++...+..
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 99999999999875 357899999999999999999999 89999999999999999865543222
Q ss_pred ------------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCC
Q 040812 197 ------------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPEC 264 (300)
Q Consensus 197 ------------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (300)
...|.+||... +...+.++|+||||+++|+|++|..||..... ......+.....+..+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~pE~~~---~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~ 233 (265)
T cd08217 161 GHDSSFAKTYVGTPYYMSPEQLN---HMSYDEKSDIWSLGCLIYELCALSPPFTARNQ----LQLASKIKEGKFRRIPYR 233 (265)
T ss_pred cCCcccccccccCCCccChhhhc---CCCCCchhHHHHHHHHHHHHHHCCCcccCcCH----HHHHHHHhcCCCCCCccc
Confidence 22234444432 34467789999999999999999999975431 222333334445566777
Q ss_pred CChHHHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 265 SSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 265 ~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
.+..+.+++.+||.. +|++||++.++++|||+
T Consensus 234 ~~~~~~~l~~~~l~~-~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 234 YSSELNEVIKSMLNV-DPDKRPSTEELLQLPLI 265 (265)
T ss_pred cCHHHHHHHHHHccC-CcccCCCHHHHhhCCCC
Confidence 889999999999999 99999999999999996
No 207
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=8.9e-41 Score=282.14 Aligned_cols=232 Identities=28% Similarity=0.427 Sum_probs=179.9
Q ss_pred eeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC-----CCHHHHHH-HHhcCCCceeEeceeeeCCCCcEEEEEeccC
Q 040812 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP-----PNPQELNI-LRQTNSPYIVKCHQIFTKPSGEVSILMEYMD 136 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~ 136 (300)
+.||+|+||.||+|.+..+++.||+|++....... ....|..+ ....+|+|++++++++.... ..|+||||++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~-~~~lv~e~~~ 80 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKD-YLYLVMEYLN 80 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCC-eEEEEEeccC
Confidence 56999999999999999999999999986533211 11234333 34558999999999998754 8999999999
Q ss_pred CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc---------------eeecc
Q 040812 137 AGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY---------------SCLYE 201 (300)
Q Consensus 137 ~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~---------------~~~~~ 201 (300)
+++|.+++...+.+++..+..++.|++.||.|||+.|++|+||+|+||+++.++...+.. ...|.
T Consensus 81 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~y~ 160 (260)
T cd05611 81 GGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPDYL 160 (260)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccccccCCCCcCcc
Confidence 999999998877899999999999999999999999999999999999998875543322 22345
Q ss_pred ccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHhccCC
Q 040812 202 SGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGD 281 (300)
Q Consensus 202 ~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~d 281 (300)
+||... +..++.++||||||+++|+|+||..||...+... ............+......+++.+.++|.+||.. |
T Consensus 161 ~pe~~~---~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~-~ 235 (260)
T cd05611 161 APETIL---GVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA-VFDNILSRRINWPEEVKEFCSPEAVDLINRLLCM-D 235 (260)
T ss_pred Chhhhc---CCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHhcccCCCCcccccCCHHHHHHHHHHccC-C
Confidence 555543 3446789999999999999999999996543321 1111111111223334446789999999999999 9
Q ss_pred CCCCCC---HHHHhcCCCCCCC
Q 040812 282 PSKRWT---ASQLLSHPFLADA 300 (300)
Q Consensus 282 p~~Rpt---~~~~l~hpw~~~~ 300 (300)
|++||+ ++|+++||||++.
T Consensus 236 p~~R~~~~~~~~~l~~~~~~~~ 257 (260)
T cd05611 236 PAKRLGANGYQEIKSHPFFKSI 257 (260)
T ss_pred HHHccCCCcHHHHHcChHhhcC
Confidence 999995 5799999999863
No 208
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=2.5e-40 Score=278.36 Aligned_cols=233 Identities=37% Similarity=0.573 Sum_probs=190.4
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCC----CCCCHHHHHHHHhcCCCceeEeceeeeCCC-CcEEEEE
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG----TPPNPQELNILRQTNSPYIVKCHQIFTKPS-GEVSILM 132 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~lv~ 132 (300)
+|++.+.||+|++|.||+|.+..+++.|++|++..... ...+.+|+.++++++|+||+++++.+.... ...++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 47888999999999999999999999999999876543 233467999999999999999999987651 4799999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce---------------
Q 040812 133 EYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS--------------- 197 (300)
Q Consensus 133 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~--------------- 197 (300)
||+++++|.+++.....+++..+..++.|++.||.|||+.|++|+||+|+||+++.++...+.++
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~ 160 (260)
T cd06606 81 EYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGT 160 (260)
T ss_pred EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEecccccccccc
Confidence 99999999999988778999999999999999999999999999999999999998654432221
Q ss_pred ------eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHh-hCCCCCCCCCCChHHH
Q 040812 198 ------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAIC-FREPPSLPECSSEKFR 270 (300)
Q Consensus 198 ------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~ 270 (300)
..|.+||... +...+.++||||||+++|+|++|..||..... ......... ....+..+...+..+.
T Consensus 161 ~~~~~~~~y~~pE~~~---~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~ 234 (260)
T cd06606 161 GSVRGTPYWMAPEVIR---GEEYGRAADIWSLGCTVIEMATGKPPWSELGN---PMAALYKIGSSGEPPEIPEHLSEEAK 234 (260)
T ss_pred cCCCCCccccCHhhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc---hHHHHHhccccCCCcCCCcccCHHHH
Confidence 1233333322 33467799999999999999999999976541 222222222 2344566777899999
Q ss_pred HHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 271 DFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 271 ~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
++|.+||.. ||++||++.++++||||
T Consensus 235 ~~i~~~l~~-~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 235 DFLRKCLRR-DPKKRPTADELLQHPFL 260 (260)
T ss_pred HHHHHhCcC-ChhhCCCHHHHhhCCCC
Confidence 999999999 99999999999999998
No 209
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=5.5e-41 Score=293.76 Aligned_cols=234 Identities=24% Similarity=0.338 Sum_probs=184.1
Q ss_pred CCCCcceeeeeecCCcceEEEEEEEcc-----CCeEEEEEEeecCCCCC---CCHHHHHHHHhc-CCCceeEeceeeeCC
Q 040812 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQ-----TLALYALKVMQCDRGTP---PNPQELNILRQT-NSPYIVKCHQIFTKP 124 (300)
Q Consensus 54 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~~~~---~~~~E~~~l~~l-~h~niv~~~~~~~~~ 124 (300)
...++|++.+.||+|+||.||+|.+.. +++.||+|+++...... ....|+.++.++ +|+||+++++++...
T Consensus 4 ~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~ 83 (337)
T cd05054 4 FPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKP 83 (337)
T ss_pred cCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecC
Confidence 345689999999999999999997543 45789999987543222 235699999999 899999999988766
Q ss_pred CCcEEEEEeccCCCCHHHHHHhC---------------------------------------------------------
Q 040812 125 SGEVSILMEYMDAGSLEIYVKSR--------------------------------------------------------- 147 (300)
Q Consensus 125 ~~~~~lv~e~~~~~~L~~~l~~~--------------------------------------------------------- 147 (300)
...++++|||+++++|.+++...
T Consensus 84 ~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (337)
T cd05054 84 GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGD 163 (337)
T ss_pred CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhh
Confidence 66799999999999999998642
Q ss_pred ----CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcccee---------------------eccc
Q 040812 148 ----GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSC---------------------LYES 202 (300)
Q Consensus 148 ----~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~---------------------~~~~ 202 (300)
..+++..+..++.||+.||.|||++||+||||||+|||++.++...+++++ .|.+
T Consensus 164 ~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~a 243 (337)
T cd05054 164 ELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 243 (337)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccC
Confidence 257889999999999999999999999999999999999976554332221 2445
Q ss_pred cccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHhccCC
Q 040812 203 GEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGD 281 (300)
Q Consensus 203 ~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~d 281 (300)
||... +..++.++|||||||++|||++ |..||............+ ........+...++++.+++.+||+. +
T Consensus 244 PE~~~---~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~cl~~-~ 316 (337)
T cd05054 244 PESIF---DKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRL---KEGTRMRAPEYATPEIYSIMLDCWHN-N 316 (337)
T ss_pred cHHhc---CCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHH---hccCCCCCCccCCHHHHHHHHHHccC-C
Confidence 55433 4557789999999999999998 999997543333222222 22334455667789999999999999 9
Q ss_pred CCCCCCHHHHhcC
Q 040812 282 PSKRWTASQLLSH 294 (300)
Q Consensus 282 p~~Rpt~~~~l~h 294 (300)
|++||+++++++|
T Consensus 317 p~~RPs~~ell~~ 329 (337)
T cd05054 317 PEDRPTFSELVEI 329 (337)
T ss_pred hhhCcCHHHHHHH
Confidence 9999999999875
No 210
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=1.7e-40 Score=290.65 Aligned_cols=238 Identities=23% Similarity=0.312 Sum_probs=184.7
Q ss_pred Cccee-eeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC----------------CCHHHHHHHHhcCCCceeEece
Q 040812 57 SQLEK-LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP----------------PNPQELNILRQTNSPYIVKCHQ 119 (300)
Q Consensus 57 ~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----------------~~~~E~~~l~~l~h~niv~~~~ 119 (300)
++|.. .+.||+|+||.||+|.+..+++.||+|.++...... ...+|+.++++++|+||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 45654 577999999999999999999999999986543222 2457999999999999999999
Q ss_pred eeeCCCCcEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcccee-
Q 040812 120 IFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSC- 198 (300)
Q Consensus 120 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~- 198 (300)
++.... ..|+||||+. ++|.+++.....+++..+..++.|++.||.|||+.|++|+||||+||+++.++...+.+++
T Consensus 88 ~~~~~~-~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~ 165 (335)
T PTZ00024 88 VYVEGD-FINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGL 165 (335)
T ss_pred EEecCC-cEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCccc
Confidence 988754 8999999997 5999999887789999999999999999999999999999999999999887654332211
Q ss_pred --------------------------------eccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchH
Q 040812 199 --------------------------------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDF 246 (300)
Q Consensus 199 --------------------------------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~ 246 (300)
.|.+||.... ...++.++|||||||++|+|+||..||...+.....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~ 243 (335)
T PTZ00024 166 ARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMG--AEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQL 243 (335)
T ss_pred eeecccccccccccccccccccccccccccccCCCCChhccc--CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 2344444321 123577999999999999999999999765443222
Q ss_pred HHHHHHHhhCCCC-----------------------CCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 247 LSLMLAICFREPP-----------------------SLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 247 ~~~~~~~~~~~~~-----------------------~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
..+.......... ......++.+.++|.+||.. ||++||++++++.||||+.
T Consensus 244 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~-~P~~R~s~~~~l~~~~~~~ 318 (335)
T PTZ00024 244 GRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKL-NPLERISAKEALKHEYFKS 318 (335)
T ss_pred HHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCC-CchhccCHHHHhcCcccCC
Confidence 2222211100000 01123477899999999999 9999999999999999975
No 211
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.3e-41 Score=309.32 Aligned_cols=230 Identities=23% Similarity=0.372 Sum_probs=197.0
Q ss_pred CCCCcceeeeeecCCcceEEEEEEEcc-----CCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCC
Q 040812 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQ-----TLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPS 125 (300)
Q Consensus 54 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 125 (300)
...++.+..+.||+|.||+||+|+... ....||||.++..... .+|.+|+..+..++|||||+++|++...+
T Consensus 483 i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~ 562 (774)
T KOG1026|consen 483 IPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGD 562 (774)
T ss_pred echhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCC
Confidence 356777889999999999999998643 3468999999876544 46789999999999999999999998765
Q ss_pred CcEEEEEeccCCCCHHHHHHhCC--------------CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCC
Q 040812 126 GEVSILMEYMDAGSLEIYVKSRG--------------RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKME 191 (300)
Q Consensus 126 ~~~~lv~e~~~~~~L~~~l~~~~--------------~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~ 191 (300)
..|+|+|||..|||.+++.... .++..+.+.|+.||+.|+.||-++.++||||..+|+||.++..
T Consensus 563 -P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~ 641 (774)
T KOG1026|consen 563 -PLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLV 641 (774)
T ss_pred -eeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceE
Confidence 8999999999999999997431 2788999999999999999999999999999999999998876
Q ss_pred CCccce---------------------eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHH
Q 040812 192 HPCGYS---------------------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSL 249 (300)
Q Consensus 192 ~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~ 249 (300)
.+++++ ..|++||+..+ +.++.+||||||||+|||+++ |+.||.+..++ ++
T Consensus 642 VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly---~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~----EV 714 (774)
T KOG1026|consen 642 VKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILY---GKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQ----EV 714 (774)
T ss_pred EEecccccchhhhhhhhhcccCCceeeeecCCHHHhhc---CcccchhhhhhhhhhhhhhhccccCcccccchH----HH
Confidence 655543 33677777663 457889999999999999997 99999876554 55
Q ss_pred HHHHhhCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHh
Q 040812 250 MLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLL 292 (300)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l 292 (300)
+..+..+.....|++++.++.+||..||+. +|++||++.||-
T Consensus 715 Ie~i~~g~lL~~Pe~CP~~vY~LM~~CW~~-~P~~RPsF~eI~ 756 (774)
T KOG1026|consen 715 IECIRAGQLLSCPENCPTEVYSLMLECWNE-NPKRRPSFKEIH 756 (774)
T ss_pred HHHHHcCCcccCCCCCCHHHHHHHHHHhhc-CcccCCCHHHHH
Confidence 666666777888999999999999999999 999999999873
No 212
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=7.6e-41 Score=287.61 Aligned_cols=236 Identities=28% Similarity=0.421 Sum_probs=187.2
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC--CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
.++|++.+.||+|+||.||++.+..+++.||+|.+...... ..+.+|+.++++++|||++++++.+.... ..|+|+|
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~-~~~lv~e 96 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGD-ELWVVME 96 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCC-cEEEEEe
Confidence 46899999999999999999999888999999998543222 23467999999999999999999988755 8999999
Q ss_pred ccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce----------------
Q 040812 134 YMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS---------------- 197 (300)
Q Consensus 134 ~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~---------------- 197 (300)
|+++++|.+++... .+++..+..++.|++.||.|||++|++|+||||+||+++.++...+..+
T Consensus 97 ~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~~ 175 (293)
T cd06647 97 YLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM 175 (293)
T ss_pred cCCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccccccccc
Confidence 99999999998754 5889999999999999999999999999999999999987654332221
Q ss_pred ---eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHH
Q 040812 198 ---CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIR 274 (300)
Q Consensus 198 ---~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 274 (300)
..|.+||... ++.++.++|||||||++|+|++|+.||............. .........+...+..++++|.
T Consensus 176 ~~~~~y~~PE~~~---~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~ 250 (293)
T cd06647 176 VGTPYWMAPEVVT---RKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIA--TNGTPELQNPEKLSAIFRDFLN 250 (293)
T ss_pred cCChhhcCchhhc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehh--cCCCCCCCCccccCHHHHHHHH
Confidence 1245555443 3456779999999999999999999996543321111111 0111112234456788999999
Q ss_pred HHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 275 CCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 275 ~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
+||.. +|++||++.++++|+||+.
T Consensus 251 ~~l~~-~p~~Rp~~~~il~h~~~~~ 274 (293)
T cd06647 251 RCLEM-DVEKRGSAKELLQHPFLKI 274 (293)
T ss_pred HHccC-ChhhCcCHHHHhcCHHHhc
Confidence 99999 9999999999999999975
No 213
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=2.1e-40 Score=286.32 Aligned_cols=231 Identities=23% Similarity=0.313 Sum_probs=176.9
Q ss_pred CCcceeeeeecCCcceEEEEEEEcc----------------CCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeE
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQ----------------TLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVK 116 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~----------------~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~ 116 (300)
.++|++.+.||+|+||.||+|.+.. ++..||+|.+...... ..+.+|+.++.+++||||++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 4678999999999999999998643 3457999998754322 23567999999999999999
Q ss_pred eceeeeCCCCcEEEEEeccCCCCHHHHHHhCC-------------------CCCHHHHHHHHHHHHHHHHHhHhCCcccc
Q 040812 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRG-------------------RLSEDIICTISRQVLKGLFYMHSRNIVHR 177 (300)
Q Consensus 117 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-------------------~l~~~~~~~i~~qi~~~l~~lH~~~i~H~ 177 (300)
+++++.... ..|+||||+++++|.+++.... .+++..+..++.||+.||.|||+.||+||
T Consensus 84 ~~~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~ 162 (304)
T cd05096 84 LLGVCVDED-PLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHR 162 (304)
T ss_pred EEEEEecCC-ceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence 999988764 7999999999999999986431 35778899999999999999999999999
Q ss_pred CCCCCceeecCCCCCCcccee---------------------eccccccccccCCCCCCchhhHHHHHHHHHHHHh--CC
Q 040812 178 DIKPANVLINEKMEHPCGYSC---------------------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYM--GY 234 (300)
Q Consensus 178 Dlkp~Nill~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt--g~ 234 (300)
||||+|||++.++...+++++ .|.+||... ++.++.++|||||||++|||++ +.
T Consensus 163 dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~~~~~~ 239 (304)
T cd05096 163 DLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECIL---MGKFTTASDVWAFGVTLWEILMLCKE 239 (304)
T ss_pred CcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHh---cCCCCchhhhHHHHHHHHHHHHccCC
Confidence 999999999987654332221 244444432 4557889999999999999987 56
Q ss_pred CCCCCCCCCchHHHHHHHHh----hCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHh
Q 040812 235 YPFLEPGQEPDFLSLMLAIC----FREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLL 292 (300)
Q Consensus 235 ~pf~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l 292 (300)
.||......... ....... .......+..+++.+.++|.+||.. ||++|||++++.
T Consensus 240 ~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~-~p~~RPs~~~i~ 299 (304)
T cd05096 240 QPYGELTDEQVI-ENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSR-DCRERPSFSDIH 299 (304)
T ss_pred CCCCcCCHHHHH-HHHHHHhhhccccccccCCCCCCHHHHHHHHHHccC-CchhCcCHHHHH
Confidence 788654332221 1111111 1112233456788999999999999 999999999994
No 214
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=2.6e-40 Score=279.88 Aligned_cols=230 Identities=20% Similarity=0.316 Sum_probs=186.3
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEec
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEY 134 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~ 134 (300)
..+|++.+.||+|+||.||+|.+.++++.||+|.+..+... ..+.+|+.++++++|+||+++++++..+. ..++||||
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e~ 83 (263)
T cd05052 5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-PFYIITEF 83 (263)
T ss_pred hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCC-CcEEEEEe
Confidence 45688999999999999999999999999999998654321 23467999999999999999999987654 89999999
Q ss_pred cCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce---------------
Q 040812 135 MDAGSLEIYVKSR--GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS--------------- 197 (300)
Q Consensus 135 ~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~--------------- 197 (300)
+++++|.+++... ..+++..++.++.|++.||.|||+.|++||||||+||+++.++...+.++
T Consensus 84 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~ 163 (263)
T cd05052 84 MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 163 (263)
T ss_pred CCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccceeeccC
Confidence 9999999999753 35899999999999999999999999999999999999987655433221
Q ss_pred -----eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHH
Q 040812 198 -----CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRD 271 (300)
Q Consensus 198 -----~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (300)
..|.+||... +..++.++|||||||++|||+| |..||...... ...........+..+...+..+.+
T Consensus 164 ~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 236 (263)
T cd05052 164 GAKFPIKWTAPESLA---YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS----QVYELLEKGYRMERPEGCPPKVYE 236 (263)
T ss_pred CCCCccccCCHHHhc---cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH----HHHHHHHCCCCCCCCCCCCHHHHH
Confidence 1244555432 4566789999999999999998 99999654322 222223334455667778999999
Q ss_pred HHHHHhccCCCCCCCCHHHHhcC
Q 040812 272 FIRCCLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 272 li~~~l~~~dp~~Rpt~~~~l~h 294 (300)
+|.+||.. ||++||++.++++.
T Consensus 237 li~~cl~~-~p~~Rp~~~~l~~~ 258 (263)
T cd05052 237 LMRACWQW-NPSDRPSFAEIHQA 258 (263)
T ss_pred HHHHHccC-CcccCCCHHHHHHH
Confidence 99999999 99999999999763
No 215
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=2.8e-40 Score=278.50 Aligned_cols=229 Identities=25% Similarity=0.364 Sum_probs=186.5
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEec
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEY 134 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~ 134 (300)
...+|++.+.||+|+||.||++... +..+|+|.++.+.....+.+|+.++++++|+|++++++++....+..++||||
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (256)
T cd05082 4 NMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 81 (256)
T ss_pred cHHhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCchHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence 4567999999999999999999775 67899999876554445678999999999999999999765555579999999
Q ss_pred cCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcccee--------------
Q 040812 135 MDAGSLEIYVKSRG--RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSC-------------- 198 (300)
Q Consensus 135 ~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~-------------- 198 (300)
+++++|.+++.... .+++..+..++.|++.||.|||++|++||||||+||+++.++...+++++
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 161 (256)
T cd05082 82 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL 161 (256)
T ss_pred CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccccCCCCcc
Confidence 99999999997643 47899999999999999999999999999999999999987665433221
Q ss_pred --eccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHH
Q 040812 199 --LYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275 (300)
Q Consensus 199 --~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 275 (300)
.|.+||... +..++.++|||||||++|+|++ |+.||.... .......+.....+..+..+++.+.++|.+
T Consensus 162 ~~~y~aPE~~~---~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 234 (256)
T cd05082 162 PVKWTAPEALR---EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP----LKDVVPRVEKGYKMDAPDGCPPVVYDVMKQ 234 (256)
T ss_pred ceeecCHHHHc---cCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC----HHHHHHHHhcCCCCCCCCCCCHHHHHHHHH
Confidence 355555443 4456779999999999999998 999996432 222333333444556667789999999999
Q ss_pred HhccCCCCCCCCHHHHhc
Q 040812 276 CLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 276 ~l~~~dp~~Rpt~~~~l~ 293 (300)
||.. ||++|||+.++++
T Consensus 235 ~l~~-~p~~Rpt~~~l~~ 251 (256)
T cd05082 235 CWHL-DAATRPSFLQLRE 251 (256)
T ss_pred HhcC-ChhhCcCHHHHHH
Confidence 9999 9999999999975
No 216
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-42 Score=304.09 Aligned_cols=232 Identities=34% Similarity=0.507 Sum_probs=195.4
Q ss_pred eeecCCcceEEEEEEEccCCeEEEEEEeecCC--CCCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEeccCCCCH
Q 040812 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDR--GTPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSL 140 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~~~L 140 (300)
-+||+|+||+||-|++..|....|||-+.... ..++...|+...++++|.|||+++|.+.. +|++-|.||-++||+|
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~se-nGf~kIFMEqVPGGSL 659 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSE-NGFFKIFMEQVPGGSL 659 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCC-CCeEEEEeecCCCCcH
Confidence 46999999999999999999999999986433 34455789999999999999999999765 4699999999999999
Q ss_pred HHHHHh-CCCC--CHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCC---------C-----------CCccce
Q 040812 141 EIYVKS-RGRL--SEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKM---------E-----------HPCGYS 197 (300)
Q Consensus 141 ~~~l~~-~~~l--~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~---------~-----------~~~~~~ 197 (300)
.++++. -+++ ++..+-.+.+||+.||.|||++.|+|||||.+|+|++... . -.+.++
T Consensus 660 SsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGT 739 (1226)
T KOG4279|consen 660 SSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGT 739 (1226)
T ss_pred HHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCCccccccccc
Confidence 999986 4566 8899999999999999999999999999999999997421 1 134456
Q ss_pred eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHh
Q 040812 198 CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCL 277 (300)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 277 (300)
-.|++||....... .|++++|||||||++.||.||++||.+....... +.+.-.....|.+|+.++.+.+.||.+|.
T Consensus 740 LQYMAPEvIDqG~R-GYG~aADIWS~GCT~vEMATGrPPF~ElgspqAA--MFkVGmyKvHP~iPeelsaeak~FilrcF 816 (1226)
T KOG4279|consen 740 LQYMAPEVIDQGPR-GYGKAADIWSFGCTMVEMATGRPPFVELGSPQAA--MFKVGMYKVHPPIPEELSAEAKNFILRCF 816 (1226)
T ss_pred hhhhChHhhccCCc-CCCchhhhhhccceeEeeccCCCCeeecCChhHh--hhhhcceecCCCCcHHHHHHHHHHHHHHc
Confidence 77899998775433 4678999999999999999999999876544322 22223456678889999999999999999
Q ss_pred ccCCCCCCCCHHHHhcCCCCCC
Q 040812 278 QKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 278 ~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
.. ||.+||++.++|++||+..
T Consensus 817 ep-d~~~R~sA~~LL~DpFlq~ 837 (1226)
T KOG4279|consen 817 EP-DPCDRPSAKDLLQDPFLQH 837 (1226)
T ss_pred CC-CcccCccHHHhccCccccc
Confidence 99 9999999999999999863
No 217
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=3.2e-40 Score=283.81 Aligned_cols=239 Identities=26% Similarity=0.420 Sum_probs=183.0
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILM 132 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~ 132 (300)
++|++.+.||+|++|.||+|.+..+++.||+|.+...... ..+.+|+.++++++|+||+++++++.... ..|+||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~ 80 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK-RLYLVF 80 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCC-eEEEEE
Confidence 6799999999999999999999999999999998654322 23467999999999999999999988754 899999
Q ss_pred eccCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCC-CC---Cccc----------
Q 040812 133 EYMDAGSLEIYVKSRG--RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKM-EH---PCGY---------- 196 (300)
Q Consensus 133 e~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~-~~---~~~~---------- 196 (300)
||+++ +|.+++.... .+++..++.++.||+.||.|||++|++|+||||+||+++.++ .. ++|.
T Consensus 81 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~ 159 (294)
T PLN00009 81 EYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRT 159 (294)
T ss_pred ecccc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCccc
Confidence 99965 8887776543 357888999999999999999999999999999999998543 21 1111
Q ss_pred ------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCC-------------
Q 040812 197 ------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFRE------------- 257 (300)
Q Consensus 197 ------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~------------- 257 (300)
+..|.+||... ....++.++|||||||++|+|+||..||..........+.........
T Consensus 160 ~~~~~~~~~y~~PE~~~--~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (294)
T PLN00009 160 FTHEVVTLWYRAPEILL--GSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDY 237 (294)
T ss_pred cccCceeecccCHHHHh--CCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhh
Confidence 12345555432 123467799999999999999999999976443322222211110000
Q ss_pred -------CC----CCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCCC
Q 040812 258 -------PP----SLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300 (300)
Q Consensus 258 -------~~----~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~~ 300 (300)
.. ......++.+.+++.+||.. ||++||++.++++||||+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~-~P~~Rps~~~~l~~~~~~~~ 290 (294)
T PLN00009 238 KSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRL-DPSKRITARAALEHEYFKDL 290 (294)
T ss_pred hhhcccCCCCCHHHhCcCCChHHHHHHHHHccC-ChhhCcCHHHHhcCchHhHH
Confidence 00 01124578899999999999 99999999999999999863
No 218
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.9e-40 Score=278.88 Aligned_cols=222 Identities=24% Similarity=0.361 Sum_probs=178.4
Q ss_pred eeecCCcceEEEEEEEccCCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEeccCCCC
Q 040812 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGS 139 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~~~ 139 (300)
+.||+|+||.||+|.+..+++.+|+|.+...... ..+.+|+.++++++|+||+++++++.... ..|+||||+++++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e~~~~~~ 79 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ-PIYIVMELVQGGD 79 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCC-CeEEEEeeccCCc
Confidence 3699999999999999989999999987643221 23567999999999999999999987754 8999999999999
Q ss_pred HHHHHHhC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcccee--------------------
Q 040812 140 LEIYVKSR-GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSC-------------------- 198 (300)
Q Consensus 140 L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~-------------------- 198 (300)
|.+++... ..+++..++.++.|++.||.|||++|++||||||+||+++.++...+..++
T Consensus 80 L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~ 159 (252)
T cd05084 80 FLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIP 159 (252)
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCc
Confidence 99999764 358999999999999999999999999999999999999877544322221
Q ss_pred -eccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHH
Q 040812 199 -LYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276 (300)
Q Consensus 199 -~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 276 (300)
.|.+||.. .++.++.++|||||||++|||++ |..||...... ..............+...+..+.+++.+|
T Consensus 160 ~~y~aPE~~---~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 232 (252)
T cd05084 160 VKWTAPEAL---NYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ----QTREAIEQGVRLPCPELCPDAVYRLMERC 232 (252)
T ss_pred eeecCchhh---cCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH----HHHHHHHcCCCCCCcccCCHHHHHHHHHH
Confidence 24445543 24556789999999999999998 89999643321 22222223344556777889999999999
Q ss_pred hccCCCCCCCCHHHHhc
Q 040812 277 LQKGDPSKRWTASQLLS 293 (300)
Q Consensus 277 l~~~dp~~Rpt~~~~l~ 293 (300)
|.. ||++|||+.++++
T Consensus 233 l~~-~p~~Rps~~~~~~ 248 (252)
T cd05084 233 WEY-DPGQRPSFSTVHQ 248 (252)
T ss_pred cCC-ChhhCcCHHHHHH
Confidence 999 9999999999875
No 219
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=4.8e-40 Score=280.56 Aligned_cols=230 Identities=26% Similarity=0.432 Sum_probs=181.3
Q ss_pred eecCCcceEEEEEEEccCCeEEEEEEeecCCCCCC-----CHHHH---HHHHhcCCCceeEeceeeeCCCCcEEEEEecc
Q 040812 64 VLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPP-----NPQEL---NILRQTNSPYIVKCHQIFTKPSGEVSILMEYM 135 (300)
Q Consensus 64 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-----~~~E~---~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~ 135 (300)
.||+|+||.||+|.+..+++.||+|.+........ ...|. ..++...||||+.+++++.... ..|+||||+
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~v~e~~ 79 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD-KLSFILDLM 79 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCC-EEEEEEecC
Confidence 48999999999999999999999999875432211 12333 3344568999999999988765 899999999
Q ss_pred CCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-----------------ee
Q 040812 136 DAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY-----------------SC 198 (300)
Q Consensus 136 ~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~-----------------~~ 198 (300)
.|++|..++...+.+++..++.++.|++.||.|||+.+++||||||+||+++.++...+.+ +.
T Consensus 80 ~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 159 (278)
T cd05606 80 NGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTH 159 (278)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCCCc
Confidence 9999999998877899999999999999999999999999999999999998775532222 23
Q ss_pred eccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHhc
Q 040812 199 LYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQ 278 (300)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 278 (300)
.|.+||.... +..++.++||||+||++|+|++|+.||....... ... ............+...+.++.+++.+||.
T Consensus 160 ~y~aPE~~~~--~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~-~~~-~~~~~~~~~~~~~~~~s~~~~~li~~~l~ 235 (278)
T cd05606 160 GYMAPEVLQK--GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-KHE-IDRMTLTMAVELPDSFSPELRSLLEGLLQ 235 (278)
T ss_pred CCcCcHHhcC--CCCCCcccchHhHHHHHHHHHhCCCCCCCCCccc-hHH-HHHHhhccCCCCCCcCCHHHHHHHHHHhh
Confidence 3455555431 2346778999999999999999999997643221 111 12222234456677779999999999999
Q ss_pred cCCCCCCC-----CHHHHhcCCCCCC
Q 040812 279 KGDPSKRW-----TASQLLSHPFLAD 299 (300)
Q Consensus 279 ~~dp~~Rp-----t~~~~l~hpw~~~ 299 (300)
. ||++|| ++.++++||||++
T Consensus 236 ~-~p~~R~~~~~~~~~~ll~~~~~~~ 260 (278)
T cd05606 236 R-DVNRRLGCLGRGAQEVKEHPFFRS 260 (278)
T ss_pred c-CHHhccCCCCCCHHHHHhCccccC
Confidence 9 999999 9999999999976
No 220
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=2.4e-40 Score=283.46 Aligned_cols=232 Identities=29% Similarity=0.444 Sum_probs=185.4
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC--CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEecc
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYM 135 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~ 135 (300)
.|...+.||+|++|.||++.+..+++.+++|.+...... ..+.+|+.+++.++|+||+++++++.... ..|+|+||+
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~-~~~~v~e~~ 98 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGD-ELWVVMEFL 98 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCC-eEEEEEecc
Confidence 455668999999999999999988999999988643222 22467999999999999999999987654 899999999
Q ss_pred CCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce------------------
Q 040812 136 DAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS------------------ 197 (300)
Q Consensus 136 ~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~------------------ 197 (300)
++++|.+++.. .++++..+..++.|++.||+|||++|++||||+|+||+++.++...+.++
T Consensus 99 ~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 177 (285)
T cd06648 99 EGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVG 177 (285)
T ss_pred CCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccccC
Confidence 99999999987 57899999999999999999999999999999999999998765433222
Q ss_pred -eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCC--CCCCChHHHHHHH
Q 040812 198 -CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL--PECSSEKFRDFIR 274 (300)
Q Consensus 198 -~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~ 274 (300)
..|.+||.. .+..++.++|||||||++|+|++|+.||...... ...........+.. +...+..+.++|.
T Consensus 178 ~~~y~aPE~~---~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 250 (285)
T cd06648 178 TPYWMAPEVI---SRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPL----QAMKRIRDNLPPKLKNLHKVSPRLRSFLD 250 (285)
T ss_pred CccccCHHHh---cCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHH----HHHHHHHhcCCCCCcccccCCHHHHHHHH
Confidence 224444443 2445677999999999999999999999654332 22222222222222 2336789999999
Q ss_pred HHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 275 CCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 275 ~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
+||.. ||++||++.++++||||++
T Consensus 251 ~~l~~-~p~~Rpt~~~il~~~~~~~ 274 (285)
T cd06648 251 RMLVR-DPAQRATAAELLNHPFLAK 274 (285)
T ss_pred HHccc-ChhhCcCHHHHccCccccc
Confidence 99999 9999999999999999975
No 221
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=1.4e-40 Score=283.62 Aligned_cols=231 Identities=26% Similarity=0.419 Sum_probs=188.7
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhcC-CCceeEeceeeeCCCCcEEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTN-SPYIVKCHQIFTKPSGEVSI 130 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~l 130 (300)
++|++.+.||+|+||.||++.+..+++.||+|++...... ....+|+.++++++ |+||+++++++.... ..++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~-~~~l 79 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEE-NLYF 79 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCc-eEEE
Confidence 4789999999999999999999999999999998653221 22356889999998 999999999987654 8999
Q ss_pred EEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce-------------
Q 040812 131 LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS------------- 197 (300)
Q Consensus 131 v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~------------- 197 (300)
|||++++++|.+++...+.+++..+..++.|++.||.+||+.|++|+||+|+||+++.++...+.++
T Consensus 80 v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~ 159 (280)
T cd05581 80 VLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPE 159 (280)
T ss_pred EEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCccccc
Confidence 9999999999999998878999999999999999999999999999999999999987655332221
Q ss_pred --------------------------eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHH
Q 040812 198 --------------------------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLML 251 (300)
Q Consensus 198 --------------------------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~ 251 (300)
..|.+||... +...+.++||||||++++++++|..||........ ..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~---~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~----~~ 232 (280)
T cd05581 160 SNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLN---EKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLT----FQ 232 (280)
T ss_pred cCCCCCccccccccccccccccccCCccccCHHHhC---CCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHH----HH
Confidence 1223333222 33466789999999999999999999976543211 11
Q ss_pred HHhhCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCH----HHHhcCCCC
Q 040812 252 AICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTA----SQLLSHPFL 297 (300)
Q Consensus 252 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~----~~~l~hpw~ 297 (300)
... ......+...++.+.++|.+||.. ||++||++ +++++||||
T Consensus 233 ~~~-~~~~~~~~~~~~~~~~li~~~l~~-~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 233 KIL-KLEYSFPPNFPPDAKDLIEKLLVL-DPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred HHH-hcCCCCCCccCHHHHHHHHHHhcC-CHhhCCCcccCHHHHhcCCCC
Confidence 111 334456677789999999999999 99999999 999999998
No 222
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=2.3e-40 Score=283.57 Aligned_cols=237 Identities=33% Similarity=0.515 Sum_probs=192.4
Q ss_pred CCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCC-CCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEE
Q 040812 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG-TPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILM 132 (300)
Q Consensus 54 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~ 132 (300)
+..+.|++.+.||+|+||.||+|.+..++..|++|++..... ...+.+|+..+++++|+|++++++.+.... ..|+|+
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~lv~ 94 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGD-ELWVVM 94 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECC-EEEEEE
Confidence 456678999999999999999999998899999999876543 234467999999999999999999988764 899999
Q ss_pred eccCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce--------------
Q 040812 133 EYMDAGSLEIYVKSRG-RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS-------------- 197 (300)
Q Consensus 133 e~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~-------------- 197 (300)
||+++++|.+++.... .++...+..++.|++.||.|||+.|++|+||+|+||+++.++...+...
T Consensus 95 e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 174 (286)
T cd06614 95 EYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRN 174 (286)
T ss_pred eccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhc
Confidence 9999999999998876 7999999999999999999999999999999999999997755432221
Q ss_pred -----eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCC--CCCCChHHH
Q 040812 198 -----CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL--PECSSEKFR 270 (300)
Q Consensus 198 -----~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ 270 (300)
..|.+||... +..++.++|+|||||++|+|++|..||....... ..........+.. +..++..+.
T Consensus 175 ~~~~~~~y~~PE~~~---~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~ 247 (286)
T cd06614 175 SVVGTPYWMAPEVIK---RKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR----ALFLITTKGIPPLKNPEKWSPEFK 247 (286)
T ss_pred cccCCcccCCHhHhc---CCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHhcCCCCCcchhhCCHHHH
Confidence 2244555432 4456789999999999999999999996533221 1122222222222 233788999
Q ss_pred HHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 271 DFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 271 ~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
++|.+||.. +|.+||++.++++|+||++
T Consensus 248 ~li~~~l~~-~p~~Rpt~~~il~~~~~~~ 275 (286)
T cd06614 248 DFLNKCLVK-DPEKRPSAEELLQHPFLKK 275 (286)
T ss_pred HHHHHHhcc-ChhhCcCHHHHhhChHhhc
Confidence 999999999 9999999999999999976
No 223
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.5e-40 Score=283.74 Aligned_cols=229 Identities=23% Similarity=0.368 Sum_probs=184.6
Q ss_pred CCcceeeeeecCCcceEEEEEEEcc-----CCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCc
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQ-----TLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGE 127 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 127 (300)
.++|.+.+.||+|+||.||+|.+.. +++.||+|.++..... ..+.+|++++++++|+||+++++++.... .
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~ 82 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGD-P 82 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCC-C
Confidence 4678999999999999999998753 3678999998754332 24567999999999999999999988764 8
Q ss_pred EEEEEeccCCCCHHHHHHhCC--------------CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCC
Q 040812 128 VSILMEYMDAGSLEIYVKSRG--------------RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHP 193 (300)
Q Consensus 128 ~~lv~e~~~~~~L~~~l~~~~--------------~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~ 193 (300)
.++||||+++++|.+++...+ .+++..+..++.||+.||.+||++|++||||||+||+++.++...
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~k 162 (280)
T cd05049 83 PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVK 162 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEE
Confidence 999999999999999997542 378889999999999999999999999999999999998775543
Q ss_pred ccce---------------------eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHH
Q 040812 194 CGYS---------------------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLML 251 (300)
Q Consensus 194 ~~~~---------------------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~ 251 (300)
+..+ ..|.+||... +..++.++|||||||++|||++ |..||...... ....
T Consensus 163 l~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~----~~~~ 235 (280)
T cd05049 163 IGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIM---YRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE----EVIE 235 (280)
T ss_pred ECCcccceecccCcceecCCCCcccceecChhhhc---cCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH----HHHH
Confidence 2221 1245555443 5567889999999999999999 99999765432 2222
Q ss_pred HHhhCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 252 AICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 252 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
.+........+...+..+.+++.+||.. ||++||++.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~li~~~l~~-~p~~Rp~~~eil~ 276 (280)
T cd05049 236 CITQGRLLQRPRTCPSEVYDIMLGCWKR-DPQQRINIKDIHE 276 (280)
T ss_pred HHHcCCcCCCCCCCCHHHHHHHHHHcCC-CcccCCCHHHHHH
Confidence 2333444455667889999999999999 9999999999975
No 224
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-42 Score=326.20 Aligned_cols=236 Identities=33% Similarity=0.519 Sum_probs=206.7
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCC----CCCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDR----GTPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
+++....||.|.||.||-|.+.++|+..|+|-++... ..+...+|..++..++|||+|+++|+-.+. ...+|.||
T Consensus 1236 rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHR-ekv~IFME 1314 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHR-EKVYIFME 1314 (1509)
T ss_pred eeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecH-HHHHHHHH
Confidence 4667789999999999999999999999999876422 223447899999999999999999985554 47999999
Q ss_pred ccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcc------------------
Q 040812 134 YMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG------------------ 195 (300)
Q Consensus 134 ~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~------------------ 195 (300)
||++|+|.+.++..+..++...+.+..|++.|+.|||++||+||||||+||+++.++..+.|
T Consensus 1315 yC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~e 1394 (1509)
T KOG4645|consen 1315 YCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGE 1394 (1509)
T ss_pred HhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcCCHH
Confidence 99999999999988888999999999999999999999999999999999999988654332
Q ss_pred -----ceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHH
Q 040812 196 -----YSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFR 270 (300)
Q Consensus 196 -----~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (300)
++..|++||......+..-+.+.|||||||++.||+||+.||.+.+.+ ..++..+..+..|.+|+.++++.+
T Consensus 1395 l~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne---~aIMy~V~~gh~Pq~P~~ls~~g~ 1471 (1509)
T KOG4645|consen 1395 LQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE---WAIMYHVAAGHKPQIPERLSSEGR 1471 (1509)
T ss_pred HHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch---hHHHhHHhccCCCCCchhhhHhHH
Confidence 466688998887666555566999999999999999999999876554 467888889999999999999999
Q ss_pred HHHHHHhccCCCCCCCCHHHHhcCCCCC
Q 040812 271 DFIRCCLQKGDPSKRWTASQLLSHPFLA 298 (300)
Q Consensus 271 ~li~~~l~~~dp~~Rpt~~~~l~hpw~~ 298 (300)
|||.+||+. ||++|.++.|++.|.|-+
T Consensus 1472 dFle~Cl~~-dP~~Rw~~~qlle~~f~~ 1498 (1509)
T KOG4645|consen 1472 DFLEHCLEQ-DPKMRWTASQLLEHAFGK 1498 (1509)
T ss_pred HHHHHHHhc-CchhhhHHHHHHHhhccc
Confidence 999999999 999999999999998854
No 225
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=4.5e-40 Score=277.05 Aligned_cols=228 Identities=27% Similarity=0.415 Sum_probs=184.8
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEec
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEY 134 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~ 134 (300)
+|++.+.||+|+||.||++.+..+++.+|+|.++..... ....+|+.++++++|+||+++++.+.... ..|+||||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e~ 79 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADG-HLYIVMEY 79 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECC-EEEEEEee
Confidence 588999999999999999999999999999998643322 23356899999999999999999988754 89999999
Q ss_pred cCCCCHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc----------------
Q 040812 135 MDAGSLEIYVKS--RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY---------------- 196 (300)
Q Consensus 135 ~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~---------------- 196 (300)
+++++|.+++.. ...+++..+..++.|++.||.|||++|++|+||||+||+++.++...+.+
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (255)
T cd08219 80 CDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACT 159 (255)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeeccccccccc
Confidence 999999998864 33589999999999999999999999999999999999998765433222
Q ss_pred ---eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHH
Q 040812 197 ---SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFI 273 (300)
Q Consensus 197 ---~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 273 (300)
...|.+||... +...+.++|+||||+++|+|++|..||...+. ...............+..++..+.++|
T Consensus 160 ~~~~~~~~aPE~~~---~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~li 232 (255)
T cd08219 160 YVGTPYYVPPEIWE---NMPYNNKSDIWSLGCILYELCTLKHPFQANSW----KNLILKVCQGSYKPLPSHYSYELRSLI 232 (255)
T ss_pred ccCCccccCHHHHc---cCCcCchhhhhhhchhheehhhccCCCCCCCH----HHHHHHHhcCCCCCCCcccCHHHHHHH
Confidence 12244455432 44567899999999999999999999965322 223333333444456677889999999
Q ss_pred HHHhccCCCCCCCCHHHHhcC
Q 040812 274 RCCLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 274 ~~~l~~~dp~~Rpt~~~~l~h 294 (300)
.+||.. ||++||++.+++.-
T Consensus 233 ~~~l~~-~P~~Rp~~~~il~~ 252 (255)
T cd08219 233 KQMFKR-NPRSRPSATTILSR 252 (255)
T ss_pred HHHHhC-CcccCCCHHHHhhc
Confidence 999999 99999999999864
No 226
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=2.9e-40 Score=286.05 Aligned_cols=237 Identities=27% Similarity=0.369 Sum_probs=180.8
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC----CCCHHHHHHHHhcCCCceeEeceeeeCCC------
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT----PPNPQELNILRQTNSPYIVKCHQIFTKPS------ 125 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~------ 125 (300)
+++|++.+.||+|+||.||+|.++.+++.+|+|.+...... ....+|+.++++++|+||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 57899999999999999999999999999999998654322 23467999999999999999999875432
Q ss_pred -CcEEEEEeccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce------
Q 040812 126 -GEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS------ 197 (300)
Q Consensus 126 -~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~------ 197 (300)
...++||||+.+ +|...+.. ...+++..++.++.|++.||.|||++|++|+||||+||++++++...+.++
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 165 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPY 165 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhc
Confidence 247999999976 67766654 447999999999999999999999999999999999999998765432221
Q ss_pred ------------------------eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHH
Q 040812 198 ------------------------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAI 253 (300)
Q Consensus 198 ------------------------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~ 253 (300)
..|.+||.... +..++.++|||||||++|||++|++||...........+. ..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~-~~ 242 (311)
T cd07866 166 DGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLG--ERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIF-KL 242 (311)
T ss_pred cCCCcccccCCcccccccccceeccCcCChHHhhC--CCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-HH
Confidence 12445554321 2346779999999999999999999996544322221111 11
Q ss_pred hhCCC-------------------CCC-------CCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 254 CFREP-------------------PSL-------PECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 254 ~~~~~-------------------~~~-------~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
..... ... .....+.+.++|.+||.. ||++|||+.+++.||||
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~-~p~~R~t~~ell~~~~f 311 (311)
T cd07866 243 CGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSL-DPYKRLTASDALEHPYF 311 (311)
T ss_pred hCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHccc-CcccCcCHHHHhcCCCC
Confidence 10000 000 012346789999999999 99999999999999998
No 227
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=5.2e-41 Score=288.47 Aligned_cols=233 Identities=27% Similarity=0.406 Sum_probs=185.0
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC--CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEec
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEY 134 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~ 134 (300)
+.|.....||+|+||.||++.+..++..||||.+...... ..+.+|+.++++++|+||+++++.+.... ..|+||||
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~-~~~lv~e~ 100 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGD-ELWVVMEF 100 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCC-eEEEEEeC
Confidence 4455567899999999999999989999999998643221 23457999999999999999999987754 89999999
Q ss_pred cCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce-----------------
Q 040812 135 MDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS----------------- 197 (300)
Q Consensus 135 ~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~----------------- 197 (300)
+++++|.+++.. +.+++..+..++.||+.||.|||++|++||||||+||+++.++...+.++
T Consensus 101 ~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~ 179 (292)
T cd06658 101 LEGGALTDIVTH-TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLV 179 (292)
T ss_pred CCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceee
Confidence 999999998854 46899999999999999999999999999999999999987755433222
Q ss_pred --eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCC--CCCCCChHHHHHH
Q 040812 198 --CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPS--LPECSSEKFRDFI 273 (300)
Q Consensus 198 --~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li 273 (300)
..|.+||... +..++.++|||||||++|||++|+.||....... .+.......... .....+..+.+++
T Consensus 180 ~~~~y~aPE~~~---~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~li 252 (292)
T cd06658 180 GTPYWMAPEVIS---RLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ----AMRRIRDNLPPRVKDSHKVSSVLRGFL 252 (292)
T ss_pred cCccccCHHHHc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHhcCCCccccccccCHHHHHHH
Confidence 2345555442 3456779999999999999999999997543322 122221122222 2235688899999
Q ss_pred HHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 274 RCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 274 ~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
.+||.. ||++|||++++++||||+.
T Consensus 253 ~~~l~~-~P~~Rpt~~~il~~~~~~~ 277 (292)
T cd06658 253 DLMLVR-EPSQRATAQELLQHPFLKL 277 (292)
T ss_pred HHHccC-ChhHCcCHHHHhhChhhhc
Confidence 999999 9999999999999999975
No 228
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=7.6e-41 Score=292.83 Aligned_cols=239 Identities=28% Similarity=0.372 Sum_probs=184.7
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC----CCCHHHHHHHHhcCCCceeEeceeeeCC---CCcEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT----PPNPQELNILRQTNSPYIVKCHQIFTKP---SGEVS 129 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~---~~~~~ 129 (300)
++|++.+.||+|+||.||+|.+..+++.||+|.+...... ....+|+.++++++|+||+++++++... ....|
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 6789999999999999999999999999999998754322 2335799999999999999999987532 23689
Q ss_pred EEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce------------
Q 040812 130 ILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS------------ 197 (300)
Q Consensus 130 lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~------------ 197 (300)
+||||+. ++|.+++.....+++..++.++.||+.||.|||++|++||||||+||+++.++...++++
T Consensus 85 lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 163 (334)
T cd07855 85 VVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTE 163 (334)
T ss_pred EEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCcC
Confidence 9999996 589999987778999999999999999999999999999999999999998765433222
Q ss_pred -----------eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHH--------------
Q 040812 198 -----------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLA-------------- 252 (300)
Q Consensus 198 -----------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~-------------- 252 (300)
..|.+||.... ...++.++|||||||++|||++|+.||...+.......+...
T Consensus 164 ~~~~~~~~~~~~~y~~PE~~~~--~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 241 (334)
T cd07855 164 HKYFMTEYVATRWYRAPELLLS--LPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGS 241 (334)
T ss_pred CCcccccccccccccChHHhcC--CcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhch
Confidence 12344444321 234677999999999999999999999654322111111100
Q ss_pred -----Hh--hCCCCCC-----CCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 253 -----IC--FREPPSL-----PECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 253 -----~~--~~~~~~~-----~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
.. ....... ....++.+.++|.+||+. ||++||++++++.||||++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~-~P~~Rpt~~~~l~~~~~~~ 299 (334)
T cd07855 242 DRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQF-DPEERITVEQALQHPFLAQ 299 (334)
T ss_pred hhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccC-ChhhCcCHHHHHhChhhhh
Confidence 00 0001111 134578899999999999 9999999999999999964
No 229
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=8.2e-41 Score=282.53 Aligned_cols=226 Identities=31% Similarity=0.456 Sum_probs=181.3
Q ss_pred ecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEeccCCCC
Q 040812 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGS 139 (300)
Q Consensus 65 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~~~ 139 (300)
||+|+||.||++.+..+++.+++|.+...... ....+|+.++++++|+||+++++.+.... ..|+||||+++++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-~~~lv~e~~~~~~ 79 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKK-NLYLVMEYLPGGD 79 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCc-EEEEEEecCCCCc
Confidence 68999999999999999999999998654331 23356899999999999999999887654 8999999999999
Q ss_pred HHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcccee---------------------
Q 040812 140 LEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSC--------------------- 198 (300)
Q Consensus 140 L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~--------------------- 198 (300)
|.+++...+.+++..+..++.|++.||.|||+.|++|+||+|+||+++.++...++.++
T Consensus 80 L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~ 159 (265)
T cd05579 80 LASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDK 159 (265)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccccccc
Confidence 99999887789999999999999999999999999999999999999987655433322
Q ss_pred ------eccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCC--ChHHH
Q 040812 199 ------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECS--SEKFR 270 (300)
Q Consensus 199 ------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~ 270 (300)
.|.+||... +...+.++||||||+++|+|+||..||...... ........ .....+... +..+.
T Consensus 160 ~~~~~~~~~~Pe~~~---~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~ 231 (265)
T cd05579 160 RIVGTPDYIAPEVIL---GQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE----EIFQNILN-GKIEWPEDVEVSDEAI 231 (265)
T ss_pred CcccCccccCHHHhc---CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHhc-CCcCCCccccCCHHHH
Confidence 123333322 233567899999999999999999999654432 12222211 222333333 89999
Q ss_pred HHHHHHhccCCCCCCCCH---HHHhcCCCCCCC
Q 040812 271 DFIRCCLQKGDPSKRWTA---SQLLSHPFLADA 300 (300)
Q Consensus 271 ~li~~~l~~~dp~~Rpt~---~~~l~hpw~~~~ 300 (300)
+++.+||.. +|++|||+ .++++||||+++
T Consensus 232 ~~i~~~l~~-~p~~Rpt~~~~~~~l~~~~~~~~ 263 (265)
T cd05579 232 DLISKLLVP-DPEKRLGAKSIEEIKNHPFFKGI 263 (265)
T ss_pred HHHHHHhcC-CHhhcCCCccHHHHhcCccccCC
Confidence 999999999 99999999 999999999874
No 230
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.8e-40 Score=282.66 Aligned_cols=230 Identities=24% Similarity=0.363 Sum_probs=183.7
Q ss_pred CCcceeeeeecCCcceEEEEEEEc----cCCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcE
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHK----QTLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEV 128 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~----~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 128 (300)
+++|++.+.||+|+||.||+|.+. .+++.+|+|.+...... ..+.+|+.++++++|+||+++++++.... ..
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~ 82 (283)
T cd05090 4 LSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQ-PV 82 (283)
T ss_pred hhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCC-ce
Confidence 567899999999999999999863 35678999998753322 23467999999999999999999987654 79
Q ss_pred EEEEeccCCCCHHHHHHhC-----------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCC
Q 040812 129 SILMEYMDAGSLEIYVKSR-----------------GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKME 191 (300)
Q Consensus 129 ~lv~e~~~~~~L~~~l~~~-----------------~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~ 191 (300)
|+||||+.+++|.+++... ..+++..+..++.|++.||.|||++|++||||||+||+++.++.
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~ 162 (283)
T cd05090 83 CMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLH 162 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCc
Confidence 9999999999999998532 23788899999999999999999999999999999999998755
Q ss_pred CCcccee---------------------eccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHH
Q 040812 192 HPCGYSC---------------------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSL 249 (300)
Q Consensus 192 ~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~ 249 (300)
..++.++ .|.+||... ++.++.++|||||||++|||++ |..||..... ...
T Consensus 163 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~----~~~ 235 (283)
T cd05090 163 VKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIM---YGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN----QEV 235 (283)
T ss_pred EEeccccccccccCCcceecccCCCccceecChHHhc---cCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH----HHH
Confidence 4332211 244555443 4557789999999999999998 9999965432 233
Q ss_pred HHHHhhCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcC
Q 040812 250 MLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~h 294 (300)
............+..+++.+.+++.+||+. ||++||++.+++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~-~p~~Rp~~~~i~~~ 279 (283)
T cd05090 236 IEMVRKRQLLPCSEDCPPRMYSLMTECWQE-GPSRRPRFKDIHTR 279 (283)
T ss_pred HHHHHcCCcCCCCCCCCHHHHHHHHHHccc-CcccCcCHHHHHHH
Confidence 333333444556777899999999999999 99999999999875
No 231
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=1.7e-40 Score=283.63 Aligned_cols=234 Identities=27% Similarity=0.392 Sum_probs=178.2
Q ss_pred ceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC---CCHHHHHHHHhcC-CCceeEeceeeeCCC-CcEEEEEe
Q 040812 59 LEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP---PNPQELNILRQTN-SPYIVKCHQIFTKPS-GEVSILME 133 (300)
Q Consensus 59 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~~~E~~~l~~l~-h~niv~~~~~~~~~~-~~~~lv~e 133 (300)
|++.+.||+|+||.||+|.+..+++.||+|.++...... ...+|+.++.++. |+|++++++++.+.. +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 678899999999999999999999999999987543221 2246888888885 999999999987641 47999999
Q ss_pred ccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc----------------
Q 040812 134 YMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY---------------- 196 (300)
Q Consensus 134 ~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~---------------- 196 (300)
|+++ +|.+.+.. ...+++..++.++.|++.||.|||+.|++||||||+||+++. +...++.
T Consensus 81 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~~~ 158 (282)
T cd07831 81 LMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYTEY 158 (282)
T ss_pred cCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccCCCcCCC
Confidence 9975 77777765 456899999999999999999999999999999999999998 4433222
Q ss_pred --eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHh-----------h--CCCCCC
Q 040812 197 --SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAIC-----------F--REPPSL 261 (300)
Q Consensus 197 --~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~-----------~--~~~~~~ 261 (300)
+..|.+||... .++..+.++|||||||++|||++|..||...+............. . ......
T Consensus 159 ~~~~~y~aPE~~~--~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (282)
T cd07831 159 ISTRWYRAPECLL--TDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNF 236 (282)
T ss_pred CCCcccCChhHhh--cCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccC
Confidence 22345555432 234567799999999999999999999965433211111111000 0 000011
Q ss_pred -----------CCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 262 -----------PECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 262 -----------~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
....+..+.++|.+||.. ||++||+++++++||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~-~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 237 PSKKGTGLRKLLPNASAEGLDLLKKLLAY-DPDERITAKQALRHPYF 282 (282)
T ss_pred cccccccHHHHcccccHHHHHHHHHHhcc-CcccccCHHHHhhCCCC
Confidence 124578999999999999 99999999999999998
No 232
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=6.8e-40 Score=277.73 Aligned_cols=232 Identities=29% Similarity=0.405 Sum_probs=183.3
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC-----CCHHHHHHHHhcCCCceeEeceeeeCCCCcEEE
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP-----PNPQELNILRQTNSPYIVKCHQIFTKPSGEVSI 130 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~l 130 (300)
+++|++.+.||+|+||.||+|++..+++.||+|.++...... .+.+|+.++++++||||+++++++.... ..++
T Consensus 1 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~~ 79 (267)
T cd08228 1 LANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDN-ELNI 79 (267)
T ss_pred CcceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECC-eEEE
Confidence 367999999999999999999999999999999876533221 2356999999999999999999988654 8999
Q ss_pred EEeccCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc----------
Q 040812 131 LMEYMDAGSLEIYVKS----RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY---------- 196 (300)
Q Consensus 131 v~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~---------- 196 (300)
||||+++++|.+++.. ...+++..+..++.||+.||.|||++|++|+||||+||+++.++...+.+
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~ 159 (267)
T cd08228 80 VLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 159 (267)
T ss_pred EEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccch
Confidence 9999999999988853 33589999999999999999999999999999999999998775442222
Q ss_pred ---------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCC-CCCCCCCCC
Q 040812 197 ---------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFRE-PPSLPECSS 266 (300)
Q Consensus 197 ---------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 266 (300)
...|.+||... +...+.++||||||+++|||+||..||...... ............ ++..+...+
T Consensus 160 ~~~~~~~~~~~~~~aPE~~~---~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 234 (267)
T cd08228 160 TTAAHSLVGTPYYMSPERIH---ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN--LFSLCQKIEQCDYPPLPTEHYS 234 (267)
T ss_pred hHHHhcCCCCccccChhhhc---cCCCCchhhHHHHHHHHHHHhcCCCCCcccccc--HHHHHHHHhcCCCCCCChhhcC
Confidence 22344555443 345677999999999999999999999654332 122222222222 223334577
Q ss_pred hHHHHHHHHHhccCCCCCCCCHHHHhcC
Q 040812 267 EKFRDFIRCCLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 267 ~~l~~li~~~l~~~dp~~Rpt~~~~l~h 294 (300)
..+.++|.+||.. +|++||++.++++.
T Consensus 235 ~~~~~li~~cl~~-~p~~Rp~~~~vl~~ 261 (267)
T cd08228 235 EKLRELVSMCIYP-DPDQRPDIGYVHQI 261 (267)
T ss_pred HHHHHHHHHHCCC-CcccCcCHHHHHHH
Confidence 8999999999999 99999999999863
No 233
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=3.5e-40 Score=278.09 Aligned_cols=229 Identities=23% Similarity=0.319 Sum_probs=182.5
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCC-CCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEec
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG-TPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEY 134 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~ 134 (300)
.++|++.+.||+|+||.||++.+.. +..+|+|.+..... ...+.+|+.++++++||||+++++++.... ..++||||
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e~ 80 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQR-PIYIVTEY 80 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCC-CcEEEEEc
Confidence 3568999999999999999998865 44699998865432 234578999999999999999999987654 78999999
Q ss_pred cCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcccee---------------
Q 040812 135 MDAGSLEIYVKSR-GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSC--------------- 198 (300)
Q Consensus 135 ~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~--------------- 198 (300)
+.+++|.+++... ..+++..++.++.||+.||.|||+.|++|+||||+||+++.++...++.+.
T Consensus 81 ~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~ 160 (256)
T cd05113 81 MSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVG 160 (256)
T ss_pred CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCceeecCC
Confidence 9999999999764 368999999999999999999999999999999999999887654332211
Q ss_pred -----eccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHH
Q 040812 199 -----LYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDF 272 (300)
Q Consensus 199 -----~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 272 (300)
.|.+||... +..++.++|||||||++|+|+| |..||...... .....+........+...++.+.++
T Consensus 161 ~~~~~~y~~pe~~~---~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l 233 (256)
T cd05113 161 SKFPVRWSPPEVLL---YSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS----ETVEKVSQGLRLYRPHLASEKVYAI 233 (256)
T ss_pred CccChhhCCHHHHh---cCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH----HHHHHHhcCCCCCCCCCCCHHHHHH
Confidence 234444332 3456779999999999999999 99999654332 2222233334444566678999999
Q ss_pred HHHHhccCCCCCCCCHHHHhcC
Q 040812 273 IRCCLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 273 i~~~l~~~dp~~Rpt~~~~l~h 294 (300)
+.+||.. ||++||++.+++++
T Consensus 234 i~~cl~~-~p~~Rp~~~~ll~~ 254 (256)
T cd05113 234 MYSCWHE-KAEERPTFQQLLSS 254 (256)
T ss_pred HHHHcCC-CcccCCCHHHHHHh
Confidence 9999999 99999999999864
No 234
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-42 Score=281.24 Aligned_cols=237 Identities=29% Similarity=0.447 Sum_probs=202.9
Q ss_pred CCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCC-----CHHHHHHHHhcCCCceeEeceeeeCCCCcE
Q 040812 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPP-----NPQELNILRQTNSPYIVKCHQIFTKPSGEV 128 (300)
Q Consensus 54 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-----~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 128 (300)
..+++|+.+++||+|.||+|-+|+.+.+++.+|+|+++++..... ..-|-.+|+.-+||.+..+-..|.... .+
T Consensus 165 vTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~d-rl 243 (516)
T KOG0690|consen 165 VTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQD-RL 243 (516)
T ss_pred eccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCc-eE
Confidence 356789999999999999999999999999999999987654322 245888999999999999988888755 89
Q ss_pred EEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc------------
Q 040812 129 SILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY------------ 196 (300)
Q Consensus 129 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~------------ 196 (300)
|+||||..||.|.-.+.....|++..++.+...|++||.|||+++|+.||||.+|.|+|.++..++..
T Consensus 244 CFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~ 323 (516)
T KOG0690|consen 244 CFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGD 323 (516)
T ss_pred EEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcccccc
Confidence 99999999999999998888899999999999999999999999999999999999999988764433
Q ss_pred -------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHH
Q 040812 197 -------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269 (300)
Q Consensus 197 -------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 269 (300)
+.-|.+||..+ ...|+.++|+|.+||+||||++|+.||.+.+.+.-+ +.+ ......+|..++++.
T Consensus 324 t~kTFCGTPEYLAPEVle---DnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLF-eLI----l~ed~kFPr~ls~eA 395 (516)
T KOG0690|consen 324 TTKTFCGTPEYLAPEVLE---DNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLF-ELI----LMEDLKFPRTLSPEA 395 (516)
T ss_pred eeccccCChhhcCchhhc---cccccceeehhhhhHHHHHHHhccCcccccchhHHH-HHH----HhhhccCCccCCHHH
Confidence 33455666655 566888999999999999999999999876654333 222 234567889999999
Q ss_pred HHHHHHHhccCCCCCCC-----CHHHHhcCCCCCCC
Q 040812 270 RDFIRCCLQKGDPSKRW-----TASQLLSHPFLADA 300 (300)
Q Consensus 270 ~~li~~~l~~~dp~~Rp-----t~~~~l~hpw~~~~ 300 (300)
+.|+..+|.+ ||.+|. .+.|+.+|+||..+
T Consensus 396 ktLLsGLL~k-dP~kRLGgGpdDakEi~~h~FF~~v 430 (516)
T KOG0690|consen 396 KTLLSGLLKK-DPKKRLGGGPDDAKEIMRHRFFASV 430 (516)
T ss_pred HHHHHHHhhc-ChHhhcCCCchhHHHHHhhhhhccC
Confidence 9999999999 999998 48999999999864
No 235
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=5e-40 Score=276.55 Aligned_cols=231 Identities=33% Similarity=0.515 Sum_probs=190.8
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
+|++.+.||+|+||.||++.+..+++.||+|.+...... ....+|+++++.++|+|++++++.+... +..++|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~-~~~~lv~e 79 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEK-GKLCIVME 79 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecC-CEEEEEEE
Confidence 588999999999999999999999999999998765432 2235799999999999999999998776 48999999
Q ss_pred ccCCCCHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-------------
Q 040812 134 YMDAGSLEIYVKSR----GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY------------- 196 (300)
Q Consensus 134 ~~~~~~L~~~l~~~----~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~------------- 196 (300)
|+++++|.+++... ..+++..+..++.|++.||.+||+.|++|+||+|+||+++.++...+.+
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~ 159 (258)
T cd08215 80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDL 159 (258)
T ss_pred ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCcce
Confidence 99999999999763 5799999999999999999999999999999999999999865543222
Q ss_pred ------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHH
Q 040812 197 ------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFR 270 (300)
Q Consensus 197 ------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (300)
...|.+||... +...+.++|+||+|+++|+|++|..||..... ..............++...+..+.
T Consensus 160 ~~~~~~~~~y~~pe~~~---~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 232 (258)
T cd08215 160 AKTVVGTPYYLSPELCQ---NKPYNYKSDIWSLGCVLYELCTLKHPFEGENL----LELALKILKGQYPPIPSQYSSELR 232 (258)
T ss_pred ecceeeeecccChhHhc---cCCCCccccHHHHHHHHHHHHcCCCCCCCCcH----HHHHHHHhcCCCCCCCCCCCHHHH
Confidence 12244444332 34467799999999999999999999965432 233333344445566777889999
Q ss_pred HHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 271 DFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 271 ~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
+++.+||.. +|++|||+.++++||||
T Consensus 233 ~~i~~~l~~-~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 233 NLVSSLLQK-DPEERPSIAQILQSPFI 258 (258)
T ss_pred HHHHHHcCC-ChhhCcCHHHHhcCCCC
Confidence 999999999 99999999999999998
No 236
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=4.3e-40 Score=281.35 Aligned_cols=234 Identities=25% Similarity=0.412 Sum_probs=183.3
Q ss_pred ceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEec
Q 040812 59 LEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEY 134 (300)
Q Consensus 59 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~ 134 (300)
|++.+.||+|++|.||+|.++.+|+.||+|.+...... ..+.+|+.++++++|+|++++++++... +..|+||||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~-~~~~iv~e~ 79 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSE-NKLYLVFEF 79 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccC-CeEEEEEec
Confidence 67789999999999999999999999999998754322 2346799999999999999999998765 489999999
Q ss_pred cCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc----------------
Q 040812 135 MDAGSLEIYVKSRG--RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY---------------- 196 (300)
Q Consensus 135 ~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~---------------- 196 (300)
++ ++|.+++.... .+++..+..++.|++.||.|||+++++|+||+|+||+++.++...+.+
T Consensus 80 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 158 (283)
T cd07835 80 LD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTH 158 (283)
T ss_pred cC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCc
Confidence 96 58999987655 689999999999999999999999999999999999998765442221
Q ss_pred ---eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhh------------------
Q 040812 197 ---SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICF------------------ 255 (300)
Q Consensus 197 ---~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~------------------ 255 (300)
...|.+||.... +..++.++|||||||++|+|+||..||...........+......
T Consensus 159 ~~~~~~~~aPE~~~~--~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd07835 159 EVVTLWYRAPEILLG--SRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPT 236 (283)
T ss_pred cccccCCCCCceeec--CcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhh
Confidence 223455554321 234577999999999999999999999765432222222111000
Q ss_pred ------CCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 256 ------REPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 256 ------~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
..........+..+.++|.+||+. ||++|||++++++||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~-~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 237 FPKWARQDLSKVVPNLDEDGLDLLSKMLVY-DPAKRISAKAALQHPYF 283 (283)
T ss_pred cccccccchhhhcCCCCHHHHHHHHHHhcC-ChhhCcCHHHHhcCCCC
Confidence 000111234668899999999999 99999999999999998
No 237
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=3.6e-40 Score=281.15 Aligned_cols=230 Identities=23% Similarity=0.321 Sum_probs=183.9
Q ss_pred CCcceeeeeecCCcceEEEEEEEcc-----CCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCc
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQ-----TLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGE 127 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 127 (300)
.++|++.+.||+|+||.||+|.+.. ++..||+|.+...... ..+.+|+.++++++|+||+++++++.... .
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~ 83 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERL-P 83 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC-C
Confidence 4678999999999999999999987 7789999987643322 23567999999999999999999887654 7
Q ss_pred EEEEEeccCCCCHHHHHHhCC-------CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCC---C---Cc
Q 040812 128 VSILMEYMDAGSLEIYVKSRG-------RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKME---H---PC 194 (300)
Q Consensus 128 ~~lv~e~~~~~~L~~~l~~~~-------~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~---~---~~ 194 (300)
.++||||+++++|.+++.... .+++..+..++.||+.||.|||+++++||||||+||+++.++. . ++
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~df 163 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADF 163 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccC
Confidence 899999999999999997643 4889999999999999999999999999999999999986542 1 22
Q ss_pred cce------------------eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhh
Q 040812 195 GYS------------------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICF 255 (300)
Q Consensus 195 ~~~------------------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~ 255 (300)
|.. ..|.+||... +..++.++|||||||++|||++ |..||...... .....+..
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~----~~~~~~~~ 236 (277)
T cd05036 164 GMARDIYRASYYRKGGRAMLPIKWMPPEAFL---DGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ----EVMEFVTG 236 (277)
T ss_pred ccccccCCccceecCCCCCccHhhCCHHHHh---cCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH----HHHHHHHc
Confidence 211 1244444432 4557889999999999999997 99999654332 22223333
Q ss_pred CCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcC
Q 040812 256 REPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 256 ~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~h 294 (300)
......+...+..+.+++.+||+. ||++||++.++++|
T Consensus 237 ~~~~~~~~~~~~~~~~~i~~cl~~-~p~~Rps~~~vl~~ 274 (277)
T cd05036 237 GGRLDPPKGCPGPVYRIMTDCWQH-TPEDRPNFATILER 274 (277)
T ss_pred CCcCCCCCCCCHHHHHHHHHHcCC-CcccCcCHHHHHHH
Confidence 444555677889999999999999 99999999999986
No 238
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1.6e-40 Score=290.94 Aligned_cols=237 Identities=29% Similarity=0.403 Sum_probs=180.3
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCC----CcEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPS----GEVS 129 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~~ 129 (300)
++|++.+.||+|+||.||+|.+..+++.||+|.+...... ....+|+.++++++|+||+++++++.... ...|
T Consensus 5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 84 (336)
T cd07849 5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVY 84 (336)
T ss_pred cceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEE
Confidence 6799999999999999999999999999999998643222 22456999999999999999998765432 2589
Q ss_pred EEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-------------
Q 040812 130 ILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY------------- 196 (300)
Q Consensus 130 lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~------------- 196 (300)
+|+||+.+ +|..++.. ..+++..++.++.|++.||.|||+.|++||||||+||+++.++...+.+
T Consensus 85 lv~e~~~~-~l~~~~~~-~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~ 162 (336)
T cd07849 85 IVQELMET-DLYKLIKT-QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDH 162 (336)
T ss_pred EEehhccc-CHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeeccccccc
Confidence 99999975 88877754 4799999999999999999999999999999999999998875543322
Q ss_pred ---------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhh------------
Q 040812 197 ---------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICF------------ 255 (300)
Q Consensus 197 ---------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~------------ 255 (300)
+..|.+||... ....++.++|||||||++|+|+||+.||...+..... ..+.....
T Consensus 163 ~~~~~~~~~~~~y~aPE~~~--~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 239 (336)
T cd07849 163 TGFLTEYVATRWYRAPEIML--NSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQL-NLILGVLGTPSQEDLNCIIS 239 (336)
T ss_pred cCCcCCcCcCCCccChHHhh--CCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHHHcCCCCHHHHHHhhc
Confidence 12244555432 1234677999999999999999999999653221111 00000000
Q ss_pred -------C---CCCC-----CCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 256 -------R---EPPS-----LPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 256 -------~---~~~~-----~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
. .... .....++.+.++|.+||.. ||++|||+.++++||||+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~-dP~~Rpt~~e~l~hp~~~~ 297 (336)
T cd07849 240 LRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTF-NPHKRITVEEALAHPYLEQ 297 (336)
T ss_pred hhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCC-ChhhCcCHHHHhcCccccc
Confidence 0 0000 1123577899999999999 9999999999999999975
No 239
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=2.4e-40 Score=290.58 Aligned_cols=234 Identities=24% Similarity=0.345 Sum_probs=183.8
Q ss_pred CCCCcceeeeeecCCcceEEEEEEEc-----cCCeEEEEEEeecCCCCC---CCHHHHHHHHhc-CCCceeEeceeeeCC
Q 040812 54 DGLSQLEKLQVLGQGNGGTVFKVRHK-----QTLALYALKVMQCDRGTP---PNPQELNILRQT-NSPYIVKCHQIFTKP 124 (300)
Q Consensus 54 ~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~---~~~~E~~~l~~l-~h~niv~~~~~~~~~ 124 (300)
...++|++.+.||+|+||.||+|.+. .+++.||||+++...... ...+|+.++.++ +|+||+++++++...
T Consensus 4 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (343)
T cd05103 4 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP 83 (343)
T ss_pred cchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecC
Confidence 34578999999999999999999853 457899999997543322 235799999999 689999999988766
Q ss_pred CCcEEEEEeccCCCCHHHHHHhC---------------------------------------------------------
Q 040812 125 SGEVSILMEYMDAGSLEIYVKSR--------------------------------------------------------- 147 (300)
Q Consensus 125 ~~~~~lv~e~~~~~~L~~~l~~~--------------------------------------------------------- 147 (300)
.+..++|||||++|+|.+++...
T Consensus 84 ~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (343)
T cd05103 84 GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 163 (343)
T ss_pred CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchh
Confidence 65789999999999999998642
Q ss_pred ----------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcccee-------------------
Q 040812 148 ----------GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSC------------------- 198 (300)
Q Consensus 148 ----------~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~------------------- 198 (300)
..+++..+..++.||+.||.|||++||+||||||+||+++.++...+..++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 243 (343)
T cd05103 164 EEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARL 243 (343)
T ss_pred hhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCC
Confidence 135777888999999999999999999999999999999876554333221
Q ss_pred --eccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHH
Q 040812 199 --LYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275 (300)
Q Consensus 199 --~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 275 (300)
.|.+||... +..++.++|||||||++|+|++ |..||......... ............+...++.+.+++.+
T Consensus 244 ~~~y~aPE~~~---~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (343)
T cd05103 244 PLKWMAPETIF---DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---CRRLKEGTRMRAPDYTTPEMYQTMLD 317 (343)
T ss_pred CcceECcHHhc---CCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHH---HHHHhccCCCCCCCCCCHHHHHHHHH
Confidence 244555432 4556789999999999999997 99999654333222 22222334445566678899999999
Q ss_pred HhccCCCCCCCCHHHHhcC
Q 040812 276 CLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 276 ~l~~~dp~~Rpt~~~~l~h 294 (300)
||.. ||++|||+.++++|
T Consensus 318 cl~~-~p~~Rps~~eil~~ 335 (343)
T cd05103 318 CWHG-EPSQRPTFSELVEH 335 (343)
T ss_pred HccC-ChhhCcCHHHHHHH
Confidence 9999 99999999999976
No 240
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=2.3e-40 Score=290.13 Aligned_cols=239 Identities=26% Similarity=0.365 Sum_probs=183.8
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCC----CCCCHHHHHHHHhcCCCceeEeceeeeCCC----CcE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG----TPPNPQELNILRQTNSPYIVKCHQIFTKPS----GEV 128 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~ 128 (300)
.+|++.+.||+|+||.||+|.+..+++.||+|.+..... .....+|+.+++.++|+||+++++++.... ...
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 84 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDV 84 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcE
Confidence 579999999999999999999999999999999864321 123356999999999999999999876432 248
Q ss_pred EEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce-----------
Q 040812 129 SILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS----------- 197 (300)
Q Consensus 129 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~----------- 197 (300)
|+|+||+. ++|.+++...+.+++..+..++.|++.||.|||+++++||||||+||+++.++...+.++
T Consensus 85 ~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~ 163 (337)
T cd07858 85 YIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGD 163 (337)
T ss_pred EEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCcc
Confidence 99999996 589999988788999999999999999999999999999999999999987765433221
Q ss_pred --------eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHH-------------------
Q 040812 198 --------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLM------------------- 250 (300)
Q Consensus 198 --------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~------------------- 250 (300)
..|.+||.... +..++.++|||||||++|+|++|+.||...+.......+.
T Consensus 164 ~~~~~~~~~~y~aPE~~~~--~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (337)
T cd07858 164 FMTEYVVTRWYRAPELLLN--CSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKA 241 (337)
T ss_pred cccccccccCccChHHHhc--CCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhh
Confidence 22444444321 2346779999999999999999999996532211110000
Q ss_pred ----HHHhhCCCC---CCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 251 ----LAICFREPP---SLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 251 ----~~~~~~~~~---~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
......... ......++.+.++|.+||+. ||++|||++++++||||+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~-~P~~Rps~~ell~h~~~~~ 296 (337)
T cd07858 242 RRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVF-DPSKRITVEEALAHPYLAS 296 (337)
T ss_pred hHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcC-ChhhccCHHHHHcCcchhh
Confidence 000000000 11235688899999999999 9999999999999999964
No 241
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=2.3e-40 Score=285.90 Aligned_cols=231 Identities=22% Similarity=0.315 Sum_probs=181.0
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeE--EEEEEeecCCCC---CCCHHHHHHHHhc-CCCceeEeceeeeCCCCcE
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLAL--YALKVMQCDRGT---PPNPQELNILRQT-NSPYIVKCHQIFTKPSGEV 128 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~--vaiK~~~~~~~~---~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 128 (300)
.+++|++.+.||+|+||.||+|.+..++.. +|+|.++..... ..+.+|+.++.++ +|+||+++++++.... ..
T Consensus 5 ~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~-~~ 83 (303)
T cd05088 5 EWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG-YL 83 (303)
T ss_pred chhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCC-Cc
Confidence 467899999999999999999999877654 577766532211 1235699999999 8999999999987754 89
Q ss_pred EEEEeccCCCCHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCC
Q 040812 129 SILMEYMDAGSLEIYVKSRG----------------RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEH 192 (300)
Q Consensus 129 ~lv~e~~~~~~L~~~l~~~~----------------~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~ 192 (300)
|+||||+++++|.+++...+ .+++..++.++.||+.||.|||++|++||||||+|||++.++..
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 84 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVA 163 (303)
T ss_pred eEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcE
Confidence 99999999999999997532 47899999999999999999999999999999999999887654
Q ss_pred Ccccee------------------eccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHH
Q 040812 193 PCGYSC------------------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAI 253 (300)
Q Consensus 193 ~~~~~~------------------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~ 253 (300)
.+..++ .|.+||.. .+..++.++|||||||++|||+| |..||...... ......
T Consensus 164 kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~---~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~~~~~~ 236 (303)
T cd05088 164 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESL---NYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA----ELYEKL 236 (303)
T ss_pred EeCccccCcccchhhhcccCCCcccccCHHHH---hccCCcccccchhhhhHHHHHHhcCCCCcccCChH----HHHHHH
Confidence 332221 24444433 24456789999999999999998 99999654332 222222
Q ss_pred hhCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcC
Q 040812 254 CFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 254 ~~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~h 294 (300)
........+...++.+.++|.+||.. ||++||++++++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~li~~~l~~-~p~~Rp~~~~il~~ 276 (303)
T cd05088 237 PQGYRLEKPLNCDDEVYDLMRQCWRE-KPYERPSFAQILVS 276 (303)
T ss_pred hcCCcCCCCCCCCHHHHHHHHHHcCC-ChhhCcCHHHHHHH
Confidence 22333445566788999999999999 99999999999864
No 242
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=7.6e-40 Score=275.04 Aligned_cols=231 Identities=31% Similarity=0.506 Sum_probs=191.4
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
+|++.+.||+|++|.||++.+..+++.|++|.+...... ..+.+|++++++++|+|++++++++.... ..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~~v~e 79 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSD-SLYIILE 79 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCC-EEEEEEe
Confidence 588899999999999999999999999999998765432 23467999999999999999999987754 8999999
Q ss_pred ccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-----------------
Q 040812 134 YMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY----------------- 196 (300)
Q Consensus 134 ~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~----------------- 196 (300)
|+++++|.+++.....+++..+..++.|++.||.+||+.|++|+||||+||+++.++...+..
T Consensus 80 ~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~ 159 (254)
T cd06627 80 YAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASV 159 (254)
T ss_pred cCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccccccc
Confidence 999999999998878899999999999999999999999999999999999999865433222
Q ss_pred --eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHH
Q 040812 197 --SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIR 274 (300)
Q Consensus 197 --~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 274 (300)
...|.+||... +...+.++||||||+++|+|++|..||...... ...........+..+...++.+.+++.
T Consensus 160 ~~~~~y~~pe~~~---~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~ 232 (254)
T cd06627 160 VGTPYWMAPEVIE---MSGASTASDIWSLGCTVIELLTGNPPYYDLNPM----AALFRIVQDDHPPLPEGISPELKDFLM 232 (254)
T ss_pred ccchhhcCHhhhc---CCCCCcchhHHHHHHHHHHHHhCCCCCCCccHH----HHHHHHhccCCCCCCCCCCHHHHHHHH
Confidence 12244444432 333677999999999999999999999754422 222223334455667778999999999
Q ss_pred HHhccCCCCCCCCHHHHhcCCCC
Q 040812 275 CCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 275 ~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
+||.. +|++|||+.++++||||
T Consensus 233 ~~l~~-~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 233 QCFQK-DPNLRPTAKQLLKHPWI 254 (254)
T ss_pred HHHhC-ChhhCcCHHHHhcCCCC
Confidence 99999 99999999999999998
No 243
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=5.7e-40 Score=284.90 Aligned_cols=236 Identities=25% Similarity=0.379 Sum_probs=178.4
Q ss_pred cceeeeeecCCcceEEEEEEEcc--CCeEEEEEEeecCC-----CCCCCHHHHHHHHhcCCCceeEeceeeeCCC-CcEE
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQ--TLALYALKVMQCDR-----GTPPNPQELNILRQTNSPYIVKCHQIFTKPS-GEVS 129 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~ 129 (300)
+|++.+.||+|+||.||+|.+.. +++.||+|.+.... ......+|+.++++++||||+++++++.... ...|
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 48899999999999999999988 89999999997632 2233467999999999999999999988652 3799
Q ss_pred EEEeccCCCCHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecC----CCCCCccce---
Q 040812 130 ILMEYMDAGSLEIYVKSR-----GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINE----KMEHPCGYS--- 197 (300)
Q Consensus 130 lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~----~~~~~~~~~--- 197 (300)
+||||+++ +|.+++... ..+++..++.++.||+.||.|||+.+++||||||+||+++. ++...++++
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 99999976 677666431 26899999999999999999999999999999999999988 443322221
Q ss_pred -------------------eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCc---------hHHHH
Q 040812 198 -------------------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEP---------DFLSL 249 (300)
Q Consensus 198 -------------------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~---------~~~~~ 249 (300)
..|.+||... ....++.++|||||||++|+|++|+.||....... .....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (316)
T cd07842 160 RLFNAPLKPLADLDPVVVTIWYRAPELLL--GARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERI 237 (316)
T ss_pred cccCCCcccccccCCccccccccCHHHHh--CCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHH
Confidence 1244555432 12345779999999999999999999997544322 00000
Q ss_pred HHHHh---------------------hCCCCCCC-----------CCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 250 MLAIC---------------------FREPPSLP-----------ECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 250 ~~~~~---------------------~~~~~~~~-----------~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
..... .......+ ...+..+.++|.+||.. ||++|||+.++++||||
T Consensus 238 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~-~P~~Rps~~eil~~~~f 316 (316)
T cd07842 238 FEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEY-DPTKRITAEEALEHPYF 316 (316)
T ss_pred HHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcC-CcccCcCHHHHhcCCCC
Confidence 00000 00000111 14567899999999999 99999999999999998
No 244
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1.9e-39 Score=274.67 Aligned_cols=233 Identities=30% Similarity=0.432 Sum_probs=188.1
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-------CCCHHHHHHHHhcCCCceeEeceeeeCCC-CcE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-------PPNPQELNILRQTNSPYIVKCHQIFTKPS-GEV 128 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~ 128 (300)
.+|++.+.||+|+||.||+|.+..+++.||+|.+...... ..+.+|+.++++++|+||+++++++.+.. +..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4689999999999999999999999999999987543211 12356999999999999999999886543 368
Q ss_pred EEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc------------
Q 040812 129 SILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY------------ 196 (300)
Q Consensus 129 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~------------ 196 (300)
++||||+++++|.+++...+.+++..++.++.|++.||.|||++|++|+||||+||+++.++...+++
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 161 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICM 161 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccccc
Confidence 89999999999999998777799999999999999999999999999999999999998776543222
Q ss_pred ----------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCC
Q 040812 197 ----------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSS 266 (300)
Q Consensus 197 ----------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (300)
+..|.+||... +...+.++|+|||||++|+|++|+.||...... ............+.+|...+
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~p~~~~ 235 (264)
T cd06653 162 SGTGIKSVTGTPYWMSPEVIS---GEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM---AAIFKIATQPTKPMLPDGVS 235 (264)
T ss_pred cCccccccCCcccccCHhhhc---CCCCCccccHHHHHHHHHHHHhCCCCCCccCHH---HHHHHHHcCCCCCCCCcccC
Confidence 12244444432 344677899999999999999999999654322 22222233344566788899
Q ss_pred hHHHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 267 EKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 267 ~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
+.+.++|.+||+. |.+||++.++++|||.
T Consensus 236 ~~~~~~i~~~l~~--~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 236 DACRDFLKQIFVE--EKRRPTAEFLLRHPFV 264 (264)
T ss_pred HHHHHHHHHHhcC--cccCccHHHHhcCCCC
Confidence 9999999999975 6999999999999995
No 245
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=5.4e-40 Score=282.85 Aligned_cols=230 Identities=20% Similarity=0.306 Sum_probs=181.6
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCe--EEEEEEeecCCCC---CCCHHHHHHHHhc-CCCceeEeceeeeCCCCcEE
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLA--LYALKVMQCDRGT---PPNPQELNILRQT-NSPYIVKCHQIFTKPSGEVS 129 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~--~vaiK~~~~~~~~---~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 129 (300)
+++|++.+.||+|+||.||+|.+..++. .+++|.++..... ..+.+|+.++.++ +||||+++++++.... ..|
T Consensus 1 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~-~~~ 79 (297)
T cd05089 1 WEDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRG-YLY 79 (297)
T ss_pred CccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCC-cce
Confidence 3679999999999999999999877664 4688887632211 2346799999999 7999999999987654 799
Q ss_pred EEEeccCCCCHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCC
Q 040812 130 ILMEYMDAGSLEIYVKSRG----------------RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHP 193 (300)
Q Consensus 130 lv~e~~~~~~L~~~l~~~~----------------~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~ 193 (300)
+||||+++++|.+++.... .+++..+..++.|++.||+|||++|++||||||+|||++.+....
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~k 159 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASK 159 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEE
Confidence 9999999999999996532 478899999999999999999999999999999999998765433
Q ss_pred ccce------------------eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHh
Q 040812 194 CGYS------------------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAIC 254 (300)
Q Consensus 194 ~~~~------------------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~ 254 (300)
+..+ ..|.+||... +..++.++|||||||++|||+| |..||...... .......
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~----~~~~~~~ 232 (297)
T cd05089 160 IADFGLSRGEEVYVKKTMGRLPVRWMAIESLN---YSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA----ELYEKLP 232 (297)
T ss_pred ECCcCCCccccceeccCCCCcCccccCchhhc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH----HHHHHHh
Confidence 2221 1244555432 4456789999999999999997 99999654332 2223333
Q ss_pred hCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcC
Q 040812 255 FREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 255 ~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~h 294 (300)
.......+..++..+.+++.+||.. ||.+||+++++++.
T Consensus 233 ~~~~~~~~~~~~~~~~~li~~~l~~-~p~~Rp~~~~i~~~ 271 (297)
T cd05089 233 QGYRMEKPRNCDDEVYELMRQCWRD-RPYERPPFAQISVQ 271 (297)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHcCC-ChhhCcCHHHHHHH
Confidence 3444556677889999999999999 99999999999754
No 246
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=4.8e-40 Score=277.13 Aligned_cols=228 Identities=23% Similarity=0.351 Sum_probs=183.0
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCC-CCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEecc
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG-TPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYM 135 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~ 135 (300)
.+|++.+.||+|+||.||++.++. +..+|+|.+..... ...+.+|+.++++++|+||+++++++.... ..|+||||+
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~-~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~lv~e~~ 81 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRG-KIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQR-PIFIVTEYM 81 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecC-CccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCC-ceEEEEecC
Confidence 468899999999999999999864 56899999864332 224567999999999999999999887654 899999999
Q ss_pred CCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcccee----------------
Q 040812 136 DAGSLEIYVKSR-GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSC---------------- 198 (300)
Q Consensus 136 ~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~---------------- 198 (300)
++++|.+++... ..+++..+..++.|++.||.|||+.|++||||||+||+++.++...+++++
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 161 (256)
T cd05059 82 ANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGT 161 (256)
T ss_pred CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccccccCCC
Confidence 999999999753 468999999999999999999999999999999999999987654333221
Q ss_pred ----eccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHH
Q 040812 199 ----LYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFI 273 (300)
Q Consensus 199 ----~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 273 (300)
.|.+||... +..++.++|||||||++|+|+| |..||...... ..............+...+..+.+++
T Consensus 162 ~~~~~y~~Pe~~~---~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~li 234 (256)
T cd05059 162 KFPVKWAPPEVFD---YSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS----EVVESVSAGYRLYRPKLAPTEVYTIM 234 (256)
T ss_pred CCCccccCHHHhc---cCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH----HHHHHHHcCCcCCCCCCCCHHHHHHH
Confidence 244444333 4556779999999999999999 89999654332 22223333344455667899999999
Q ss_pred HHHhccCCCCCCCCHHHHhcC
Q 040812 274 RCCLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 274 ~~~l~~~dp~~Rpt~~~~l~h 294 (300)
.+||.. +|++|||+.++++.
T Consensus 235 ~~cl~~-~p~~Rpt~~~~l~~ 254 (256)
T cd05059 235 YSCWHE-KPEDRPAFKKLLSQ 254 (256)
T ss_pred HHHhcC-ChhhCcCHHHHHHH
Confidence 999999 99999999999864
No 247
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=6.1e-40 Score=279.68 Aligned_cols=231 Identities=21% Similarity=0.330 Sum_probs=182.0
Q ss_pred CCCcceeeeeecCCcceEEEEEEEcc-----CCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCC
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQ-----TLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSG 126 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 126 (300)
..++|++.+.||+|+||.||+|.++. ++..||+|.+...... ..+.+|+.+++.++|+||+++++++... +
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~-~ 82 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG-Q 82 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC-C
Confidence 35679999999999999999998752 3568999987543221 1245799999999999999999998765 4
Q ss_pred cEEEEEeccCCCCHHHHHHhCC----------CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc
Q 040812 127 EVSILMEYMDAGSLEIYVKSRG----------RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY 196 (300)
Q Consensus 127 ~~~lv~e~~~~~~L~~~l~~~~----------~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~ 196 (300)
..++||||+++++|.+++.... .++...+..++.|++.||.|||+.|++|+||||+||+++.++...+.+
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~d 162 (277)
T cd05062 83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGD 162 (277)
T ss_pred CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECC
Confidence 8999999999999999987522 256788899999999999999999999999999999999876543322
Q ss_pred e---------------------eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHh
Q 040812 197 S---------------------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAIC 254 (300)
Q Consensus 197 ~---------------------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~ 254 (300)
+ ..|.+||... ++.++.++|||||||++|||++ |..||...... .......
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~----~~~~~~~ 235 (277)
T cd05062 163 FGMTRDIYETDYYRKGGKGLLPVRWMSPESLK---DGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE----QVLRFVM 235 (277)
T ss_pred CCCccccCCcceeecCCCCccCHhhcChhHhh---cCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH----HHHHHHH
Confidence 1 1245555443 4567889999999999999999 78898654321 2222233
Q ss_pred hCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcC
Q 040812 255 FREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 255 ~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~h 294 (300)
.......+...++.+.+++.+||+. ||++|||+.|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~li~~~l~~-~p~~Rps~~e~l~~ 274 (277)
T cd05062 236 EGGLLDKPDNCPDMLFELMRMCWQY-NPKMRPSFLEIISS 274 (277)
T ss_pred cCCcCCCCCCCCHHHHHHHHHHcCC-ChhhCcCHHHHHHH
Confidence 3444556677889999999999999 99999999999864
No 248
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=9.5e-40 Score=283.86 Aligned_cols=236 Identities=26% Similarity=0.400 Sum_probs=186.4
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC-----CCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP-----PNPQELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv 131 (300)
..|+..+.||+|+||.||++++..++..+|+|.+....... .+.+|+.++++++|+|++++++++..+. ..|+|
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~lv 103 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREH-TAWLV 103 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC-eEEEE
Confidence 44888999999999999999999999999999986543221 2356999999999999999999988765 78999
Q ss_pred EeccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc--------------
Q 040812 132 MEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY-------------- 196 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~-------------- 196 (300)
|||+.+ +|.+++.. ...+++..+..++.|++.||.|||+.|++||||+|+||+++.++...+..
T Consensus 104 ~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 182 (317)
T cd06635 104 MEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFV 182 (317)
T ss_pred EeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCCccccc
Confidence 999975 77777654 45689999999999999999999999999999999999998765543322
Q ss_pred -eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHH
Q 040812 197 -SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275 (300)
Q Consensus 197 -~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 275 (300)
+..|.+||......++..+.++|||||||++|||++|..||............ .............++.++++|.+
T Consensus 183 ~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~li~~ 259 (317)
T cd06635 183 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI---AQNESPTLQSNEWSDYFRNFVDS 259 (317)
T ss_pred CCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHH---HhccCCCCCCccccHHHHHHHHH
Confidence 23356666543223445678999999999999999999999754322221111 11122233344678899999999
Q ss_pred HhccCCCCCCCCHHHHhcCCCCC
Q 040812 276 CLQKGDPSKRWTASQLLSHPFLA 298 (300)
Q Consensus 276 ~l~~~dp~~Rpt~~~~l~hpw~~ 298 (300)
||+. +|.+||++.++++|+|+.
T Consensus 260 ~l~~-~p~~Rpt~~~il~~~~~~ 281 (317)
T cd06635 260 CLQK-IPQDRPTSEELLKHMFVL 281 (317)
T ss_pred HccC-CcccCcCHHHHHhChhhh
Confidence 9999 999999999999999984
No 249
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=3.4e-40 Score=290.85 Aligned_cols=236 Identities=25% Similarity=0.354 Sum_probs=180.8
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC----CCCHHHHHHHHhcCCCceeEeceeeeCCC-----C
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT----PPNPQELNILRQTNSPYIVKCHQIFTKPS-----G 126 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~ 126 (300)
.++|++.+.||+|+||.||+|.+..+++.||+|.+...... ....+|+.++++++|+||+++++++.... .
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 94 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQ 94 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccC
Confidence 46799999999999999999999999999999998643222 12346999999999999999999876432 2
Q ss_pred cEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc----------
Q 040812 127 EVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY---------- 196 (300)
Q Consensus 127 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~---------- 196 (300)
..|+||||+.+ +|.+.+... +++..+..++.|++.||.|||++|++||||||+||+++.++...+.+
T Consensus 95 ~~~lv~e~~~~-~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~ 171 (353)
T cd07850 95 DVYLVMELMDA-NLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 171 (353)
T ss_pred cEEEEEeccCC-CHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCC
Confidence 47999999965 888887654 89999999999999999999999999999999999999876543222
Q ss_pred --------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHH---------------
Q 040812 197 --------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAI--------------- 253 (300)
Q Consensus 197 --------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~--------------- 253 (300)
+..|.+||... +..++.++|||||||++|+|++|+.||...+....+..+....
T Consensus 172 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (353)
T cd07850 172 FMMTPYVVTRYYRAPEVIL---GMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTV 248 (353)
T ss_pred CCCCCCcccccccCHHHHh---CCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhh
Confidence 22345555443 4567789999999999999999999996543222111111100
Q ss_pred ---hhCCC----C----------------CCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCC
Q 040812 254 ---CFREP----P----------------SLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLA 298 (300)
Q Consensus 254 ---~~~~~----~----------------~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~ 298 (300)
....+ . ..+...++.+.++|.+||+. ||++|||+.|+|+||||+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~-dP~~R~t~~eiL~~~~~~ 315 (353)
T cd07850 249 RNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVI-DPEKRISVDDALQHPYIN 315 (353)
T ss_pred hHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCC-ChhhCcCHHHHhcChhHh
Confidence 00000 0 00113456789999999999 999999999999999985
No 250
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-41 Score=304.62 Aligned_cols=230 Identities=29% Similarity=0.393 Sum_probs=187.5
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC--CCCHHHHHHHHhcC-CCceeEece-eeeCC--C---
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPNPQELNILRQTN-SPYIVKCHQ-IFTKP--S--- 125 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~E~~~l~~l~-h~niv~~~~-~~~~~--~--- 125 (300)
+-.++++.+.|.+|||+.||+|++...+..||+|.+-..... ....+|+.+|++|+ |+|||.+++ ..... +
T Consensus 35 g~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~ 114 (738)
T KOG1989|consen 35 GSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV 114 (738)
T ss_pred CCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence 456788999999999999999999998899999987654211 23367999999997 999999999 33322 1
Q ss_pred CcEEEEEeccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHhHhCC--ccccCCCCCceeecCCCCC---Ccc---
Q 040812 126 GEVSILMEYMDAGSLEIYVKSR--GRLSEDIICTISRQVLKGLFYMHSRN--IVHRDIKPANVLINEKMEH---PCG--- 195 (300)
Q Consensus 126 ~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~--i~H~Dlkp~Nill~~~~~~---~~~--- 195 (300)
-.++|+||||.||.|-+++..+ .+|++.+++.|+.|++.||.+||... |||||||-+||||+.++.. ++|
T Consensus 115 ~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSat 194 (738)
T KOG1989|consen 115 WEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSAT 194 (738)
T ss_pred eEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccc
Confidence 1378999999999999999853 46999999999999999999999988 9999999999999988753 222
Q ss_pred ----------------------ceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHH
Q 040812 196 ----------------------YSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAI 253 (300)
Q Consensus 196 ----------------------~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~ 253 (300)
.+..|.+||......|...+.|+|||+|||+||-|+....||.+.... .++
T Consensus 195 t~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l----aIl--- 267 (738)
T KOG1989|consen 195 TKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL----AIL--- 267 (738)
T ss_pred cccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce----eEE---
Confidence 245577888877777888899999999999999999999999765432 222
Q ss_pred hhCCCCCCC--CCCChHHHHHHHHHhccCCCCCCCCHHHHhcC
Q 040812 254 CFREPPSLP--ECSSEKFRDFIRCCLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 254 ~~~~~~~~~--~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~h 294 (300)
.....+| ..+++.+++||..||+. ||++||++-+++.+
T Consensus 268 --ng~Y~~P~~p~ys~~l~~LI~~mL~~-nP~~RPnI~Qv~~~ 307 (738)
T KOG1989|consen 268 --NGNYSFPPFPNYSDRLKDLIRTMLQP-NPDERPNIYQVLEE 307 (738)
T ss_pred --eccccCCCCccHHHHHHHHHHHHhcc-CcccCCCHHHHHHH
Confidence 1222233 46889999999999999 99999999998753
No 251
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-42 Score=295.53 Aligned_cols=233 Identities=32% Similarity=0.432 Sum_probs=195.9
Q ss_pred cee--eeeecCCcceEEEEEEEccCCeEEEEEEeecCC----CCCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEE
Q 040812 59 LEK--LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDR----GTPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILM 132 (300)
Q Consensus 59 y~~--~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~ 132 (300)
|++ .+.||+|.||+||-|+++++|+.||||++.+.+ ......+|+.+|+++.||+||.+...|+.++ .+++||
T Consensus 564 YQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~e-rvFVVM 642 (888)
T KOG4236|consen 564 YQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPE-RVFVVM 642 (888)
T ss_pred HHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCc-eEEEEe
Confidence 554 378999999999999999999999999996533 2233468999999999999999999999876 899999
Q ss_pred eccCCCCHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCC------Cc-----------
Q 040812 133 EYMDAGSLEIYVK-SRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEH------PC----------- 194 (300)
Q Consensus 133 e~~~~~~L~~~l~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~------~~----------- 194 (300)
|.+.|+-|+-.+. ..+++++...+.++.||+.||+|||.++|+|+||||+|||+.+.... ++
T Consensus 643 EKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksF 722 (888)
T KOG4236|consen 643 EKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSF 722 (888)
T ss_pred hhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhh
Confidence 9998766665554 36789999999999999999999999999999999999999875332 22
Q ss_pred ----cceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHH
Q 040812 195 ----GYSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFR 270 (300)
Q Consensus 195 ----~~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (300)
.++..|.+||... ...|....||||+|||+|--++|..||.+. +++...+....+..++..+..++++..
T Consensus 723 RrsVVGTPAYLaPEVLr---nkGyNrSLDMWSVGVIiYVsLSGTFPFNEd---EdIndQIQNAaFMyPp~PW~eis~~Ai 796 (888)
T KOG4236|consen 723 RRSVVGTPAYLAPEVLR---NKGYNRSLDMWSVGVIIYVSLSGTFPFNED---EDINDQIQNAAFMYPPNPWSEISPEAI 796 (888)
T ss_pred hhhhcCCccccCHHHHh---hccccccccceeeeEEEEEEecccccCCCc---cchhHHhhccccccCCCchhhcCHHHH
Confidence 2355566666654 445667899999999999999999999653 344455666667788888999999999
Q ss_pred HHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 271 DFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 271 ~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
|||..+|+. .-++|.|++..|.|||+++
T Consensus 797 dlIn~LLqV-km~kRysvdk~lsh~Wlq~ 824 (888)
T KOG4236|consen 797 DLINNLLQV-KMRKRYSVDKSLSHPWLQD 824 (888)
T ss_pred HHHHHHHHH-HHHHhcchHhhccchhhhc
Confidence 999999999 9999999999999999976
No 252
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=6.1e-40 Score=284.56 Aligned_cols=236 Identities=26% Similarity=0.403 Sum_probs=186.5
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC-----CCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP-----PNPQELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv 131 (300)
+.|...+.||+|+||.||+|++..+++.|++|.+....... ...+|+.++++++|+|++++++++.... ..|+|
T Consensus 21 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~lv 99 (313)
T cd06633 21 EIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEH-TAWLV 99 (313)
T ss_pred HHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCC-EEEEE
Confidence 34777889999999999999999999999999986543221 2356899999999999999999988765 89999
Q ss_pred EeccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc--------------
Q 040812 132 MEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY-------------- 196 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~-------------- 196 (300)
|||+.+ +|.+++.. ...+++..+..++.||+.||.|||++|++|+||+|+||+++.++...+.+
T Consensus 100 ~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~ 178 (313)
T cd06633 100 MEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFV 178 (313)
T ss_pred EecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCCCCCcc
Confidence 999965 77777754 45689999999999999999999999999999999999998765443221
Q ss_pred -eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCC-CCCCCCChHHHHHHH
Q 040812 197 -SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPP-SLPECSSEKFRDFIR 274 (300)
Q Consensus 197 -~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~ 274 (300)
+..|.+||......++.++.++|||||||++|+|++|..||......... ........+ .....++..+++++.
T Consensus 179 ~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~li~ 254 (313)
T cd06633 179 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL----YHIAQNDSPTLQSNEWTDSFRGFVD 254 (313)
T ss_pred ccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH----HHHHhcCCCCCCccccCHHHHHHHH
Confidence 23466676654323455677999999999999999999999765332222 222222222 223456788999999
Q ss_pred HHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 275 CCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 275 ~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
+||+. +|.+||++.++++||||+.
T Consensus 255 ~~l~~-~P~~Rp~~~~~l~~~~~~~ 278 (313)
T cd06633 255 YCLQK-IPQERPASAELLRHDFVRR 278 (313)
T ss_pred HHccC-ChhhCcCHHHHhcCcccCC
Confidence 99999 9999999999999999975
No 253
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=4.3e-40 Score=293.44 Aligned_cols=235 Identities=22% Similarity=0.280 Sum_probs=182.9
Q ss_pred CccCCCCcceeeeeecCCcceEEEEEEEccC-----CeEEEEEEeecCCCC---CCCHHHHHHHHhcC-CCceeEeceee
Q 040812 51 QEIDGLSQLEKLQVLGQGNGGTVFKVRHKQT-----LALYALKVMQCDRGT---PPNPQELNILRQTN-SPYIVKCHQIF 121 (300)
Q Consensus 51 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~-h~niv~~~~~~ 121 (300)
.+....++|++.+.||+|+||.||+|.+... +..||+|+++..... ..+.+|+.+++++. ||||+++++++
T Consensus 31 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~ 110 (400)
T cd05105 31 RWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGAC 110 (400)
T ss_pred ceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEE
Confidence 3444567899999999999999999987533 357999998654322 23467999999996 99999999998
Q ss_pred eCCCCcEEEEEeccCCCCHHHHHHhC------------------------------------------------------
Q 040812 122 TKPSGEVSILMEYMDAGSLEIYVKSR------------------------------------------------------ 147 (300)
Q Consensus 122 ~~~~~~~~lv~e~~~~~~L~~~l~~~------------------------------------------------------ 147 (300)
... +..|+|||||++|+|.+++...
T Consensus 111 ~~~-~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (400)
T cd05105 111 TKS-GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYV 189 (400)
T ss_pred ccC-CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccc
Confidence 765 4899999999999999988642
Q ss_pred ------------------------------------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcee
Q 040812 148 ------------------------------------------GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVL 185 (300)
Q Consensus 148 ------------------------------------------~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nil 185 (300)
..+++..+..++.||+.||.|||+.+|+||||||+|||
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nil 269 (400)
T cd05105 190 PMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVL 269 (400)
T ss_pred hhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEE
Confidence 13677888999999999999999999999999999999
Q ss_pred ecCCCCCCccce---------------------eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCC
Q 040812 186 INEKMEHPCGYS---------------------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQE 243 (300)
Q Consensus 186 l~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~ 243 (300)
++.+....+.++ ..|.+||... +..++.++|||||||++|||++ |..||......
T Consensus 270 l~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~ 346 (400)
T cd05105 270 LAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIF---DNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVD 346 (400)
T ss_pred EeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhc---CCCCCchhhHHHHHHHHHHHHHCCCCCCcccchh
Confidence 987654322111 2245555443 4567889999999999999997 99999654333
Q ss_pred chHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 244 PDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
..... .+........+..++.++.++|.+||.. ||++||++.++.+
T Consensus 347 ~~~~~---~~~~~~~~~~~~~~~~~l~~li~~cl~~-dP~~RPt~~~l~~ 392 (400)
T cd05105 347 STFYN---KIKSGYRMAKPDHATQEVYDIMVKCWNS-EPEKRPSFLHLSD 392 (400)
T ss_pred HHHHH---HHhcCCCCCCCccCCHHHHHHHHHHCcc-CHhHCcCHHHHHH
Confidence 22222 2222334455667889999999999999 9999999998865
No 254
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=3.2e-40 Score=284.27 Aligned_cols=234 Identities=28% Similarity=0.415 Sum_probs=185.3
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC--CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
...|+....||+|+||.||++.+..+++.||+|.+...... ..+.+|+.+++.++||||+++++.+.... ..|+|||
T Consensus 20 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~-~~~iv~e 98 (297)
T cd06659 20 RSLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGE-ELWVLME 98 (297)
T ss_pred hhhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCC-eEEEEEe
Confidence 34455667899999999999999988999999998643322 23457999999999999999999988754 8999999
Q ss_pred ccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce----------------
Q 040812 134 YMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS---------------- 197 (300)
Q Consensus 134 ~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~---------------- 197 (300)
|+++++|..++.. ..+++..++.++.|++.||.|||+.|++|+||||+||+++.++...+..+
T Consensus 99 ~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~ 177 (297)
T cd06659 99 FLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSL 177 (297)
T ss_pred cCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccce
Confidence 9999999988765 46899999999999999999999999999999999999997765433322
Q ss_pred ---eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhC--CCCCCCCCCChHHHHH
Q 040812 198 ---CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFR--EPPSLPECSSEKFRDF 272 (300)
Q Consensus 198 ---~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l 272 (300)
..|.+||... +..++.++|||||||++|||++|+.||...... ......... .....+...++.+.++
T Consensus 178 ~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~ 250 (297)
T cd06659 178 VGTPYWMAPEVIS---RTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV----QAMKRLRDSPPPKLKNAHKISPVLRDF 250 (297)
T ss_pred ecCccccCHHHHc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHhccCCCCccccCCCCHHHHHH
Confidence 2344555443 445678999999999999999999999754322 112221111 1122234567889999
Q ss_pred HHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 273 IRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 273 i~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
|.+||+. +|++||+++++++||||.+
T Consensus 251 i~~~l~~-~P~~Rps~~~ll~~~~~~~ 276 (297)
T cd06659 251 LERMLTR-EPQERATAQELLDHPFLLQ 276 (297)
T ss_pred HHHHhcC-CcccCcCHHHHhhChhhcc
Confidence 9999999 9999999999999999965
No 255
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.4e-41 Score=294.25 Aligned_cols=236 Identities=29% Similarity=0.440 Sum_probs=197.9
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCC----CHHHHHHHHhcCCCceeEeceeeeCCCCcEEE
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPP----NPQELNILRQTNSPYIVKCHQIFTKPSGEVSI 130 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~----~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~l 130 (300)
....|.+.+.||+|.|+.|.++++..++..||||.+.+...... ..+|+++|+.++|||||+++.+.+.+. .+|+
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~-~lyl 132 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEA-TLYL 132 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecc-eeEE
Confidence 45679999999999999999999999999999999977654433 367999999999999999999998765 8999
Q ss_pred EEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccceee-----------
Q 040812 131 LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCL----------- 199 (300)
Q Consensus 131 v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~~----------- 199 (300)
||||+.+|.+++++...+++.+..++.++.|+++|++|||+++|+|||||++|||++.+...+++++.+
T Consensus 133 V~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~lq 212 (596)
T KOG0586|consen 133 VMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLMLQ 212 (596)
T ss_pred EEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeeccccccc
Confidence 999999999999999999999999999999999999999999999999999999999988654443222
Q ss_pred -------ccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHH
Q 040812 200 -------YESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDF 272 (300)
Q Consensus 200 -------~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 272 (300)
|.+||..... .+.++.+|+||+|+++|-|+.|.+||.+.+-. ............+|-.++.+..++
T Consensus 213 t~cgsppyAaPEl~~g~--~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk-----~Lr~rvl~gk~rIp~~ms~dce~l 285 (596)
T KOG0586|consen 213 TFCGSPPYAAPELFNGK--KYDGPEVDIWSLGVVLYALVEGSLPFDGQNLK-----ELRPRVLRGKYRIPFYMSCDCEDL 285 (596)
T ss_pred ccCCCCCccChHhhcCc--ccCCcceehhhhhhhheeeeecccccCCcccc-----cccchheeeeecccceeechhHHH
Confidence 3344443321 25678999999999999999999999754321 111122234455667778899999
Q ss_pred HHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 273 IRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 273 i~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
|.++|.. +|.+|++.+++.+|.|.+.
T Consensus 286 Lrk~lvl-~Pskr~~~dqim~~~W~n~ 311 (596)
T KOG0586|consen 286 LRKFLVL-NPSKRGPCDQIMKDRWRND 311 (596)
T ss_pred HHHhhcc-CccccCCHHHhhhhcccch
Confidence 9999999 9999999999999999864
No 256
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1.1e-39 Score=281.40 Aligned_cols=237 Identities=32% Similarity=0.445 Sum_probs=182.8
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC----CCHHHHHHHHhcCCCceeEeceeeeCCC------
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP----PNPQELNILRQTNSPYIVKCHQIFTKPS------ 125 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~E~~~l~~l~h~niv~~~~~~~~~~------ 125 (300)
.++|++.+.||+|+||.||+|.++.+++.||+|.++...... ...+|+.++++++||||+++++++....
T Consensus 6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~ 85 (302)
T cd07864 6 VDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFK 85 (302)
T ss_pred hhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhcc
Confidence 567999999999999999999999999999999987543222 2357999999999999999999876532
Q ss_pred ---CcEEEEEeccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce----
Q 040812 126 ---GEVSILMEYMDAGSLEIYVKSR-GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS---- 197 (300)
Q Consensus 126 ---~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~---- 197 (300)
+..|+|+||+++ ++...+... ..+++..++.++.||+.||.|||+.||+|+||||+||+++.++...+..+
T Consensus 86 ~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~ 164 (302)
T cd07864 86 KDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLAR 164 (302)
T ss_pred ccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCcccccc
Confidence 368999999987 777777653 46899999999999999999999999999999999999998765433221
Q ss_pred ----------------eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCC--
Q 040812 198 ----------------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPP-- 259 (300)
Q Consensus 198 ----------------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~-- 259 (300)
..|.+||... .....+.++|||||||++|+|++|++||........ ...+........+
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~~PE~~~--~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 241 (302)
T cd07864 165 LYNSEESRPYTNKVITLWYRPPELLL--GEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQ-LELISRLCGSPCPAV 241 (302)
T ss_pred cccCCcccccccceeccCccChHHhc--CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCChhh
Confidence 1244444332 122356799999999999999999999975443222 2222222111100
Q ss_pred ------------------------CCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 260 ------------------------SLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 260 ------------------------~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
......+..+.++|.+||.. ||++||++.+++.||||
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~-~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 242 WPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTL-DPSKRCTAEEALNSPWL 302 (302)
T ss_pred cccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccC-ChhhCCCHHHHhcCCCC
Confidence 01123578899999999999 99999999999999997
No 257
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.1e-39 Score=276.51 Aligned_cols=230 Identities=26% Similarity=0.374 Sum_probs=183.2
Q ss_pred CCcceeeeeecCCcceEEEEEEEccC---CeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEE
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQT---LALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVS 129 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 129 (300)
.++|++.+.||+|+||.||+|.++.+ ...||+|.++..... ..+.+|+.++++++|+||+++++++.... ..+
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~ 81 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSR-PVM 81 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCC-ceE
Confidence 35789999999999999999998644 458999988654322 23456999999999999999999987654 899
Q ss_pred EEEeccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcccee----------
Q 040812 130 ILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSC---------- 198 (300)
Q Consensus 130 lv~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~---------- 198 (300)
+||||+++++|.+++.. .+.+++..+..++.|++.||.|||+.+|+|+||||+||+++.++...+.++.
T Consensus 82 iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (266)
T cd05033 82 IITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEA 161 (266)
T ss_pred EEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhccccccc
Confidence 99999999999999976 3478999999999999999999999999999999999999987553322211
Q ss_pred -----------eccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCC
Q 040812 199 -----------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSS 266 (300)
Q Consensus 199 -----------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (300)
.|.+||... +..++.++||||||+++|+|++ |..||...... .....+........+...+
T Consensus 162 ~~~~~~~~~~~~y~~Pe~~~---~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~ 234 (266)
T cd05033 162 TYTTKGGKIPIRWTAPEAIA---YRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ----DVIKAVEDGYRLPPPMDCP 234 (266)
T ss_pred ceeccCCCCCccccChhhhc---cCCCccccchHHHHHHHHHHHccCCCCCCCCCHH----HHHHHHHcCCCCCCCCCCC
Confidence 244444432 4456779999999999999998 99999654322 2233333333445566788
Q ss_pred hHHHHHHHHHhccCCCCCCCCHHHHhcC
Q 040812 267 EKFRDFIRCCLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 267 ~~l~~li~~~l~~~dp~~Rpt~~~~l~h 294 (300)
+.+.+++.+||+. +|++||++++++++
T Consensus 235 ~~l~~li~~cl~~-~p~~Rp~~~ei~~~ 261 (266)
T cd05033 235 SALYQLMLDCWQK-DRNERPTFSQIVST 261 (266)
T ss_pred HHHHHHHHHHcCC-CcccCcCHHHHHHH
Confidence 9999999999999 99999999999864
No 258
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.8e-39 Score=273.61 Aligned_cols=228 Identities=24% Similarity=0.346 Sum_probs=185.3
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCC-CCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG-TPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
..++|++.+.||+|+||.||+|... ++.||+|.++.... ...+.+|+.++++++|+||+++++++... ...|+|||
T Consensus 4 ~~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~~v~e 80 (256)
T cd05039 4 NSKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQG-NPLYIVTE 80 (256)
T ss_pred ChhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCC-CCeEEEEE
Confidence 3567899999999999999999876 68899999976544 23456799999999999999999998764 48999999
Q ss_pred ccCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce--------------
Q 040812 134 YMDAGSLEIYVKSRG--RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS-------------- 197 (300)
Q Consensus 134 ~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~-------------- 197 (300)
|+++++|.+++.... .+++..+..++.|++.||.|||++|++|+||||+||+++.++...++++
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~ 160 (256)
T cd05039 81 YMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGK 160 (256)
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccccccccCC
Confidence 999999999998655 6899999999999999999999999999999999999998765433321
Q ss_pred --eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHH
Q 040812 198 --CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIR 274 (300)
Q Consensus 198 --~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 274 (300)
..|.+||... ++.++.++||||||+++|+|++ |..||..... ...............+...++.+.++|.
T Consensus 161 ~~~~~~ape~~~---~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~li~ 233 (256)
T cd05039 161 LPVKWTAPEALR---EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL----KDVVPHVEKGYRMEAPEGCPPEVYKVMK 233 (256)
T ss_pred CcccccCchhhc---CCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH----HHHHHHHhcCCCCCCccCCCHHHHHHHH
Confidence 1244555432 4456779999999999999997 9999965432 1222223333344556678899999999
Q ss_pred HHhccCCCCCCCCHHHHhc
Q 040812 275 CCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 275 ~~l~~~dp~~Rpt~~~~l~ 293 (300)
+||.. +|++|||+.++++
T Consensus 234 ~~l~~-~p~~Rp~~~~l~~ 251 (256)
T cd05039 234 DCWEL-DPAKRPTFKQLRE 251 (256)
T ss_pred HHhcc-ChhhCcCHHHHHH
Confidence 99999 9999999999975
No 259
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=4.6e-40 Score=281.91 Aligned_cols=237 Identities=30% Similarity=0.482 Sum_probs=181.5
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC---CCCHHHHHHHHhcC-CCceeEeceeeeCCCCcEEEEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT---PPNPQELNILRQTN-SPYIVKCHQIFTKPSGEVSILM 132 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~lv~ 132 (300)
++|+..+.||+|+||.||++.+..+++.+|+|.+...... ..+.+|+.++.++. |+||+++++++..+. ..+++|
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~-~~~~~~ 82 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREG-DCWICM 82 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCC-cEEEEE
Confidence 4677888999999999999999999999999998654322 23356889999986 999999999887654 789999
Q ss_pred eccCCCCHHHHHH-----hCCCCCHHHHHHHHHHHHHHHHHhHhC-CccccCCCCCceeecCCCCCCccc----------
Q 040812 133 EYMDAGSLEIYVK-----SRGRLSEDIICTISRQVLKGLFYMHSR-NIVHRDIKPANVLINEKMEHPCGY---------- 196 (300)
Q Consensus 133 e~~~~~~L~~~l~-----~~~~l~~~~~~~i~~qi~~~l~~lH~~-~i~H~Dlkp~Nill~~~~~~~~~~---------- 196 (300)
||+.. ++.++.. ....+++..+..++.|++.||+|||+. +++||||||+||+++.++...+..
T Consensus 83 e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 161 (288)
T cd06616 83 ELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS 161 (288)
T ss_pred ecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence 99965 6655432 235799999999999999999999974 999999999999998765432221
Q ss_pred --------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCC----CCC
Q 040812 197 --------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL----PEC 264 (300)
Q Consensus 197 --------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 264 (300)
+..|.+||......+..++.++|||||||++|+|++|+.||.... ...+.+........+.. +..
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T cd06616 162 IAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN---SVFDQLTQVVKGDPPILSNSEERE 238 (288)
T ss_pred CccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc---hHHHHHhhhcCCCCCcCCCcCCCc
Confidence 223455555432212357789999999999999999999996543 12222222222222222 234
Q ss_pred CChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 265 SSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 265 ~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
.+..+.+||.+||.. ||++|||++++++||||++
T Consensus 239 ~~~~l~~li~~~l~~-~p~~Rpt~~~i~~~~~~~~ 272 (288)
T cd06616 239 FSPSFVNFINLCLIK-DESKRPKYKELLEHPFIKD 272 (288)
T ss_pred cCHHHHHHHHHHccC-ChhhCcCHHHHhcChhhhc
Confidence 788999999999999 9999999999999999964
No 260
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.9e-39 Score=274.18 Aligned_cols=229 Identities=22% Similarity=0.321 Sum_probs=183.4
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
..++|++.+.||+|+||.||+|.+.. ++.||+|.++..... ..+.+|+.++++++|+||+++++++.... ..|+|||
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~-~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e 81 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLWNN-TTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEE-PIYIVTE 81 (261)
T ss_pred chhheeeEEEecccCCccEEEEEecC-CeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCC-Ceeeeee
Confidence 34679999999999999999999765 568999998754322 23567999999999999999999987754 8999999
Q ss_pred ccCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcccee-------------
Q 040812 134 YMDAGSLEIYVKSRG--RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSC------------- 198 (300)
Q Consensus 134 ~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~------------- 198 (300)
|+++++|.+++.... .+++..+..++.|++.||.+||+.|++|+||||+||+++.++...+.+++
T Consensus 82 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 161 (261)
T cd05068 82 LMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAR 161 (261)
T ss_pred cccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCccccc
Confidence 999999999997643 68999999999999999999999999999999999999987654332211
Q ss_pred -------eccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHH
Q 040812 199 -------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFR 270 (300)
Q Consensus 199 -------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (300)
.|.+||... +..++.++|||||||++|||+| |+.||...... .....+........+...++.+.
T Consensus 162 ~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 234 (261)
T cd05068 162 EGAKFPIKWTAPEAAL---YNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA----EVLQQVDQGYRMPCPPGCPKELY 234 (261)
T ss_pred CCCcCceeccCccccc---cCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH----HHHHHHHcCCCCCCCCcCCHHHH
Confidence 244555432 4456779999999999999999 99999654322 22222223333445567789999
Q ss_pred HHHHHHhccCCCCCCCCHHHHhc
Q 040812 271 DFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 271 ~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
+++.+||.. +|++||++.++++
T Consensus 235 ~li~~~l~~-~P~~Rp~~~~l~~ 256 (261)
T cd05068 235 DIMLDCWKE-DPDDRPTFETLQW 256 (261)
T ss_pred HHHHHHhhc-CcccCCCHHHHHH
Confidence 999999999 9999999999874
No 261
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1e-40 Score=289.52 Aligned_cols=238 Identities=26% Similarity=0.398 Sum_probs=182.5
Q ss_pred CCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCC----CCCCHHHHHHHHhcC-CCceeEeceeeeCCCCcE
Q 040812 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG----TPPNPQELNILRQTN-SPYIVKCHQIFTKPSGEV 128 (300)
Q Consensus 54 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 128 (300)
..-..|++++.||+||.+.||++...+.+ .||+|.+..... ...+.+|+..|.+++ |.+|++++++-.. ++++
T Consensus 358 Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~-iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~-d~~l 435 (677)
T KOG0596|consen 358 VKGREYEILKQIGSGGSSKVFKVLNSDKQ-IYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVT-DGYL 435 (677)
T ss_pred ECcchhhHHHhhcCCCcceeeeeecCCCc-chhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeecc-CceE
Confidence 34567999999999999999999987755 555555443222 234578999999995 7999999998655 4599
Q ss_pred EEEEeccCCCCHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCC---------------
Q 040812 129 SILMEYMDAGSLEIYVKSRGR-LSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEH--------------- 192 (300)
Q Consensus 129 ~lv~e~~~~~~L~~~l~~~~~-l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~--------------- 192 (300)
||||||-+. +|..+++++.. ++...++.++.||+.|+.++|++||||.||||.|+|+-.....
T Consensus 436 YmvmE~Gd~-DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVkG~LKLIDFGIA~aI~~DTT 514 (677)
T KOG0596|consen 436 YMVMECGDI-DLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVKGRLKLIDFGIANAIQPDTT 514 (677)
T ss_pred EEEeecccc-cHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEeeeEEeeeechhcccCcccc
Confidence 999999866 99999988654 4446899999999999999999999999999999998654211
Q ss_pred -----CccceeeccccccccccCCC--------CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhh-CCC
Q 040812 193 -----PCGYSCLYESGEARHRKHGG--------YNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICF-REP 258 (300)
Q Consensus 193 -----~~~~~~~~~~~~~~~~~~~~--------~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~-~~~ 258 (300)
...++.-|++||+....... ..+.++||||||||||+|+.|++||... .+...-+..+.. +..
T Consensus 515 sI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~---~n~~aKl~aI~~P~~~ 591 (677)
T KOG0596|consen 515 SIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI---INQIAKLHAITDPNHE 591 (677)
T ss_pred ceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH---HHHHHHHHhhcCCCcc
Confidence 12346678999987532211 2467999999999999999999999542 222222332222 233
Q ss_pred CCCCCCCChH-HHHHHHHHhccCCCCCCCCHHHHhcCCCCC
Q 040812 259 PSLPECSSEK-FRDFIRCCLQKGDPSKRWTASQLLSHPFLA 298 (300)
Q Consensus 259 ~~~~~~~~~~-l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~ 298 (300)
.++|...+.. +.++++.||.. ||.+||++.++|+|||+.
T Consensus 592 Iefp~~~~~~~li~~mK~CL~r-dPkkR~si~eLLqhpFl~ 631 (677)
T KOG0596|consen 592 IEFPDIPENDELIDVMKCCLAR-DPKKRWSIPELLQHPFLQ 631 (677)
T ss_pred ccccCCCCchHHHHHHHHHHhc-CcccCCCcHHHhcCcccc
Confidence 3566555444 99999999999 999999999999999985
No 262
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=3.3e-40 Score=288.27 Aligned_cols=237 Identities=29% Similarity=0.377 Sum_probs=185.1
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCC----CCCCCHHHHHHHHhcCCCceeEeceeeeCCC----CcEE
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDR----GTPPNPQELNILRQTNSPYIVKCHQIFTKPS----GEVS 129 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~~ 129 (300)
+|++.+.||+|+||.||+|++..+++.||+|.+.... ....+.+|+.+++.++|+||+++++++.... ...|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5889999999999999999999889999999987533 2234567999999999999999999887643 3689
Q ss_pred EEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-------------
Q 040812 130 ILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY------------- 196 (300)
Q Consensus 130 lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~------------- 196 (300)
+||||+++ +|.+++.....+++..++.++.||+.||.|||+.|++|+||||+||+++.++...++.
T Consensus 81 lv~e~~~~-~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~ 159 (330)
T cd07834 81 IVTELMET-DLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDE 159 (330)
T ss_pred EEecchhh-hHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccccc
Confidence 99999985 8999998877899999999999999999999999999999999999999875543221
Q ss_pred ---------eeeccccccccccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhh-----------
Q 040812 197 ---------SCLYESGEARHRKHGG-YNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICF----------- 255 (300)
Q Consensus 197 ---------~~~~~~~~~~~~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~----------- 255 (300)
+..|.+||... +. ..+.++|+|||||++|+|++|.+||...+.......+......
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~---~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 236 (330)
T cd07834 160 KGFLTEYVVTRWYRAPELLL---SSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITS 236 (330)
T ss_pred cccccccccccCcCCceeee---cccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccc
Confidence 12244454433 22 5677999999999999999999999655432211111110000
Q ss_pred ----------CC--CC---CCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 256 ----------RE--PP---SLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 256 ----------~~--~~---~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
.. .. ......+..+.++|.+||.. ||++||+++++++||||++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~-~P~~Rpt~~~ll~~~~~~~ 294 (330)
T cd07834 237 EKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVF-DPKKRITADEALAHPYLAQ 294 (330)
T ss_pred cchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccC-ChhhCCCHHHHHhCccHHh
Confidence 00 00 01123578899999999999 9999999999999999975
No 263
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=9.7e-40 Score=275.96 Aligned_cols=229 Identities=24% Similarity=0.357 Sum_probs=181.4
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCC-CCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG-TPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
..++|++.++||+|+||.||+|.... +..||+|.+..... ...+.+|+.++++++|+||+++++.+.... ..++|||
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~-~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e 81 (261)
T cd05072 4 PRESIKLVKKLGAGQFGEVWMGYYNN-STKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEE-PIYIITE 81 (261)
T ss_pred chHHeEEeeecCCcCCceEEEEEecC-CceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC-CcEEEEe
Confidence 45789999999999999999999764 56799998765332 234467999999999999999999887654 7999999
Q ss_pred ccCCCCHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce--------------
Q 040812 134 YMDAGSLEIYVKS--RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS-------------- 197 (300)
Q Consensus 134 ~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~-------------- 197 (300)
|+++++|.+++.. ...+++..+..++.|++.||.|||+.+++||||||+||+++.++...++++
T Consensus 82 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~ 161 (261)
T cd05072 82 YMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAR 161 (261)
T ss_pred cCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCceecc
Confidence 9999999999975 346889999999999999999999999999999999999998765432221
Q ss_pred ------eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHH
Q 040812 198 ------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFR 270 (300)
Q Consensus 198 ------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (300)
..|.+||... ++.++.++|||||||++|+|+| |..||...... ..............+...+.++.
T Consensus 162 ~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 234 (261)
T cd05072 162 EGAKFPIKWTAPEAIN---FGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS----DVMSALQRGYRMPRMENCPDELY 234 (261)
T ss_pred CCCccceecCCHHHhc---cCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH----HHHHHHHcCCCCCCCCCCCHHHH
Confidence 1244444432 4556779999999999999998 99999654322 22222222333444556789999
Q ss_pred HHHHHHhccCCCCCCCCHHHHhc
Q 040812 271 DFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 271 ~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
+++.+||.. ||++||+++++.+
T Consensus 235 ~li~~~l~~-~p~~Rp~~~~i~~ 256 (261)
T cd05072 235 DIMKTCWKE-KAEERPTFDYLQS 256 (261)
T ss_pred HHHHHHccC-CcccCcCHHHHHH
Confidence 999999999 9999999999864
No 264
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=6.9e-40 Score=287.61 Aligned_cols=239 Identities=28% Similarity=0.382 Sum_probs=181.6
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC--CCCHHHHHHHHhcCCCceeEeceeeeCCC--------
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPNPQELNILRQTNSPYIVKCHQIFTKPS-------- 125 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~E~~~l~~l~h~niv~~~~~~~~~~-------- 125 (300)
-++|++.+.||+|+||.||+|.+..+++.||+|.+...... ....+|+.++++++||||+++++++....
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 46899999999999999999999999999999998654332 23467999999999999999998765432
Q ss_pred -----CcEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCC-C---Cccc
Q 040812 126 -----GEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKME-H---PCGY 196 (300)
Q Consensus 126 -----~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~-~---~~~~ 196 (300)
...|+||||+++ +|.+++.. +.+++..++.++.||+.||.|||+.|++||||||+||+++.... . ++|.
T Consensus 84 ~~~~~~~~~lv~e~~~~-~L~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg~ 161 (342)
T cd07854 84 SLTELNSVYIVQEYMET-DLANVLEQ-GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGL 161 (342)
T ss_pred cccccceEEEEeecccc-cHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCccc
Confidence 247899999975 89888864 46899999999999999999999999999999999999975421 1 1111
Q ss_pred -------------------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHH----
Q 040812 197 -------------------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAI---- 253 (300)
Q Consensus 197 -------------------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~---- 253 (300)
+..|.+||... .+..++.++|||||||++|+|++|+.||................
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 239 (342)
T cd07854 162 ARIVDPHYSHKGYLSEGLVTKWYRSPRLLL--SPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVR 239 (342)
T ss_pred ceecCCccccccccccccccccccCHHHHh--CccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 22345555432 13346779999999999999999999996543322221111100
Q ss_pred --------------h--hCCCCC-----CCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 254 --------------C--FREPPS-----LPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 254 --------------~--~~~~~~-----~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
. ...... .....+.++.+||.+||+. ||++|||++++++||||+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~-dP~~R~t~~ell~h~~~~~ 305 (342)
T cd07854 240 EEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTF-NPMDRLTAEEALMHPYMSC 305 (342)
T ss_pred hHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCC-CchhccCHHHHhCCCcccc
Confidence 0 000010 1124678899999999999 9999999999999999973
No 265
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=4.7e-39 Score=272.44 Aligned_cols=230 Identities=31% Similarity=0.416 Sum_probs=183.2
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv 131 (300)
++|++.+.||+|+||.||+|.+..+++.||+|.++..... ....+|+.++++++|+|++++++++.... ..++|
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~-~~~lv 80 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENN-ELNIV 80 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCC-eEEEE
Confidence 5799999999999999999999989999999988643221 23467999999999999999999988754 89999
Q ss_pred EeccCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcccee---------
Q 040812 132 MEYMDAGSLEIYVKS----RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSC--------- 198 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~--------- 198 (300)
|||+++++|..++.. ...+++..+..++.|++.||.|||+.|++|+||||+||+++.++...+..++
T Consensus 81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~ 160 (267)
T cd08224 81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCC
Confidence 999999999998864 3458999999999999999999999999999999999999877654332221
Q ss_pred ----------eccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCC-CCCh
Q 040812 199 ----------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPE-CSSE 267 (300)
Q Consensus 199 ----------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 267 (300)
.|.+||... +..++.++|||||||++|+|++|..||..... ..............+..+. ..+.
T Consensus 161 ~~~~~~~~~~~y~apE~~~---~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 235 (267)
T cd08224 161 TAAHSLVGTPYYMSPERIH---ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM--NLYSLCKKIEKCDYPPLPADHYSE 235 (267)
T ss_pred cccceecCCccccCHHHhc---cCCCCchhcHHHHHHHHHHHHHCCCCcccCCc--cHHHHHhhhhcCCCCCCChhhcCH
Confidence 234444332 44567799999999999999999999965432 2222232222233333444 6788
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 268 KFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 268 ~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
.+.++|.+||.. +|++|||+.++++
T Consensus 236 ~~~~~i~~cl~~-~p~~Rp~~~~il~ 260 (267)
T cd08224 236 ELRDLVSRCINP-DPEKRPDISYVLQ 260 (267)
T ss_pred HHHHHHHHHcCC-CcccCCCHHHHHH
Confidence 999999999999 9999999999874
No 266
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=2.2e-39 Score=271.50 Aligned_cols=230 Identities=38% Similarity=0.585 Sum_probs=185.5
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCC--CCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEecc
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG--TPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYM 135 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~ 135 (300)
+|+..+.||+|++|.||++.+..+++.+++|++..... .....+|+..+++++|+|++++++++.... ..++++||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~l~~e~~ 79 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKD-ELWIVMEFC 79 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEEEEEecC
Confidence 47888999999999999999998899999999876542 234567999999999999999999988764 899999999
Q ss_pred CCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc------------------
Q 040812 136 DAGSLEIYVKSR-GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY------------------ 196 (300)
Q Consensus 136 ~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~------------------ 196 (300)
++++|.+++... ..+++..+..++.|++.||.+||+.|++|+||+|+||+++.++...+.+
T Consensus 80 ~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 159 (253)
T cd05122 80 SGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVG 159 (253)
T ss_pred CCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeeccccccccccccccceec
Confidence 999999999775 5789999999999999999999999999999999999999765432221
Q ss_pred eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCC--CChHHHHHHH
Q 040812 197 SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPEC--SSEKFRDFIR 274 (300)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~li~ 274 (300)
...|.+||... +...+.++||||||+++|+|++|+.||......... ........+..+.. ++..+.++|.
T Consensus 160 ~~~~~~PE~~~---~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~ 232 (253)
T cd05122 160 TPYWMAPEVIN---GKPYDYKADIWSLGITAIELAEGKPPYSELPPMKAL----FKIATNGPPGLRNPEKWSDEFKDFLK 232 (253)
T ss_pred CCcccCHHHHc---CCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHH----HHHHhcCCCCcCcccccCHHHHHHHH
Confidence 22234444332 344677999999999999999999999654322211 11111233333333 3789999999
Q ss_pred HHhccCCCCCCCCHHHHhcCCC
Q 040812 275 CCLQKGDPSKRWTASQLLSHPF 296 (300)
Q Consensus 275 ~~l~~~dp~~Rpt~~~~l~hpw 296 (300)
+||+. ||++|||+.++++|||
T Consensus 233 ~~l~~-~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 233 KCLQK-NPEKRPTAEQLLKHPF 253 (253)
T ss_pred HHccC-ChhhCCCHHHHhcCCC
Confidence 99999 9999999999999999
No 267
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=1.6e-39 Score=277.99 Aligned_cols=231 Identities=25% Similarity=0.377 Sum_probs=176.8
Q ss_pred cc-eeeeeecCCcceEEEEEEE----ccCCeEEEEEEeecCCC---CCCCHHHHHHHHhcCCCceeEeceeeeCCC-CcE
Q 040812 58 QL-EKLQVLGQGNGGTVFKVRH----KQTLALYALKVMQCDRG---TPPNPQELNILRQTNSPYIVKCHQIFTKPS-GEV 128 (300)
Q Consensus 58 ~y-~~~~~lg~G~~g~V~~~~~----~~~~~~vaiK~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~ 128 (300)
+| ++.+.||+|+||.||++.. ..+++.||+|.++.... ...+.+|+.++++++||||+++++++.... ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (283)
T cd05080 4 RYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGL 83 (283)
T ss_pred hhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceE
Confidence 45 8899999999999988653 35678999999875432 123467999999999999999999876432 358
Q ss_pred EEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcccee----------
Q 040812 129 SILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSC---------- 198 (300)
Q Consensus 129 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~---------- 198 (300)
++||||+++++|.+++... .+++..++.++.|++.||.|||++|++||||||+||+++.++...++.++
T Consensus 84 ~lv~e~~~~~~l~~~~~~~-~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~ 162 (283)
T cd05080 84 QLIMEYVPLGSLRDYLPKH-KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 162 (283)
T ss_pred EEEecCCCCCCHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCcch
Confidence 9999999999999999764 59999999999999999999999999999999999999887554332221
Q ss_pred ------------eccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCch-----------HHHHHHHHhh
Q 040812 199 ------------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPD-----------FLSLMLAICF 255 (300)
Q Consensus 199 ------------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~-----------~~~~~~~~~~ 255 (300)
.|.+||... +...+.++|||||||++|||+||..||........ ..........
T Consensus 163 ~~~~~~~~~~~~~~~~PE~~~---~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (283)
T cd05080 163 YYRVREDGDSPVFWYAVECLK---ENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLER 239 (283)
T ss_pred hhccCCCCCCCceeeCHhHhc---ccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhc
Confidence 234444332 44567899999999999999999999864322100 0001111111
Q ss_pred CCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 256 REPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 256 ~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
......+...+..+.+++.+||.. ||++|||++++++
T Consensus 240 ~~~~~~~~~~~~~~~~li~~cl~~-~p~~Rps~~~i~~ 276 (283)
T cd05080 240 GMRLPCPKNCPQEVYILMKNCWET-EAKFRPTFRSLIP 276 (283)
T ss_pred CCCCCCCCCCCHHHHHHHHHHhcc-ChhhCCCHHHHHH
Confidence 222334566789999999999999 9999999999985
No 268
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=5e-41 Score=273.32 Aligned_cols=243 Identities=26% Similarity=0.421 Sum_probs=183.8
Q ss_pred cCCCCcceeeeeecCCcceEEEEEEEccCC----eEEEEEEeecCCC----CCCCHHHHHHHHhcCCCceeEeceeeeCC
Q 040812 53 IDGLSQLEKLQVLGQGNGGTVFKVRHKQTL----ALYALKVMQCDRG----TPPNPQELNILRQTNSPYIVKCHQIFTKP 124 (300)
Q Consensus 53 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~----~~vaiK~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 124 (300)
++.+..|+++..||+|+||.||+|..++++ +.+|||.++.... .....+|+..++.++||||+.+..+|...
T Consensus 20 ve~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~ 99 (438)
T KOG0666|consen 20 VEDLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSH 99 (438)
T ss_pred HHHHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhcc
Confidence 455678999999999999999999765543 3789999987633 33457899999999999999999999875
Q ss_pred CCcEEEEEeccCCCCHHHHHHh-----CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCC----CCCCc-
Q 040812 125 SGEVSILMEYMDAGSLEIYVKS-----RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEK----MEHPC- 194 (300)
Q Consensus 125 ~~~~~lv~e~~~~~~L~~~l~~-----~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~----~~~~~- 194 (300)
++.+++++||.+. +|.+.++- ...++...++.|+.||+.|+.|||++-|+||||||.|||+..+ +..++
T Consensus 100 d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIa 178 (438)
T KOG0666|consen 100 DKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIA 178 (438)
T ss_pred CceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEee
Confidence 5689999999998 88888863 2358999999999999999999999999999999999999877 33322
Q ss_pred --c-------------------ceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCC---------c
Q 040812 195 --G-------------------YSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQE---------P 244 (300)
Q Consensus 195 --~-------------------~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~---------~ 244 (300)
| .+..|.+||.... ...|+++.||||+|||+.||+|-++.|...... .
T Consensus 179 DlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLG--a~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~d 256 (438)
T KOG0666|consen 179 DLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLG--ARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHD 256 (438)
T ss_pred cccHHHHhhccccccccCCceEEEEEecChHHhcc--cccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHH
Confidence 2 2344566665542 246788999999999999999988888532111 0
Q ss_pred hHHHHHHHHhhCC---CC---CCC--------------------------CCCChHHHHHHHHHhccCCCCCCCCHHHHh
Q 040812 245 DFLSLMLAICFRE---PP---SLP--------------------------ECSSEKFRDFIRCCLQKGDPSKRWTASQLL 292 (300)
Q Consensus 245 ~~~~~~~~~~~~~---~~---~~~--------------------------~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l 292 (300)
....++.-..... .+ ..| ..-++...+|+.++|+. ||-+|.|+++++
T Consensus 257 Ql~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~y-DP~kRIta~qAl 335 (438)
T KOG0666|consen 257 QLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTY-DPIKRITAEQAL 335 (438)
T ss_pred HHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhcc-CchhhccHHHHh
Confidence 1111111111000 00 001 11145588999999999 999999999999
Q ss_pred cCCCCCC
Q 040812 293 SHPFLAD 299 (300)
Q Consensus 293 ~hpw~~~ 299 (300)
+|+||.+
T Consensus 336 eh~yF~~ 342 (438)
T KOG0666|consen 336 EHPYFTE 342 (438)
T ss_pred ccccccc
Confidence 9999975
No 269
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1.2e-39 Score=279.54 Aligned_cols=229 Identities=23% Similarity=0.383 Sum_probs=182.1
Q ss_pred CCcceeeeeecCCcceEEEEEEEc-----cCCeEEEEEEeecCCC--CCCCHHHHHHHHhcCCCceeEeceeeeCCCCcE
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHK-----QTLALYALKVMQCDRG--TPPNPQELNILRQTNSPYIVKCHQIFTKPSGEV 128 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 128 (300)
..+|.+.+.||+|+||.||++... .++..+|+|.+..... ...+.+|+.++++++|+||+++++++.... ..
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 82 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD-PL 82 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC-cc
Confidence 467899999999999999999863 3456799998864322 223567999999999999999999987654 89
Q ss_pred EEEEeccCCCCHHHHHHhCC-------------CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcc
Q 040812 129 SILMEYMDAGSLEIYVKSRG-------------RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG 195 (300)
Q Consensus 129 ~lv~e~~~~~~L~~~l~~~~-------------~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~ 195 (300)
++||||+++++|.+++...+ .+++..+..++.|++.||.|||++|++||||||+||+++.++...+.
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~ 162 (288)
T cd05093 83 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIG 162 (288)
T ss_pred EEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEec
Confidence 99999999999999997532 48999999999999999999999999999999999999887654332
Q ss_pred ce---------------------eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHH
Q 040812 196 YS---------------------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAI 253 (300)
Q Consensus 196 ~~---------------------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~ 253 (300)
.+ ..|.+||... +..++.++|||||||++|+|+| |..||...... .....+
T Consensus 163 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~----~~~~~i 235 (288)
T cd05093 163 DFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM---YRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN----EVIECI 235 (288)
T ss_pred cCCccccccCCceeecCCCCCccccccCHHHhc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHHH
Confidence 21 1245555432 4567789999999999999998 99999654332 223333
Q ss_pred hhCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 254 CFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 254 ~~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
........+...+..+.+++.+||+. ||.+|||+.++++
T Consensus 236 ~~~~~~~~~~~~~~~l~~li~~~l~~-~p~~Rpt~~~v~~ 274 (288)
T cd05093 236 TQGRVLQRPRTCPKEVYDLMLGCWQR-EPHMRLNIKEIHS 274 (288)
T ss_pred HcCCcCCCCCCCCHHHHHHHHHHccC-ChhhCCCHHHHHH
Confidence 33444455667889999999999999 9999999999853
No 270
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1e-39 Score=280.25 Aligned_cols=229 Identities=22% Similarity=0.371 Sum_probs=182.4
Q ss_pred CCcceeeeeecCCcceEEEEEEEc-----cCCeEEEEEEeecCCCC--CCCHHHHHHHHhcCCCceeEeceeeeCCCCcE
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHK-----QTLALYALKVMQCDRGT--PPNPQELNILRQTNSPYIVKCHQIFTKPSGEV 128 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~--~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 128 (300)
..+|.+.+.||+|+||.||+|++. .++..+++|.+...... ..+.+|+.++++++|+||+++++++.... ..
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 82 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGD-PL 82 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCC-ce
Confidence 456889999999999999999864 34567899988654322 24567999999999999999999988754 89
Q ss_pred EEEEeccCCCCHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCC
Q 040812 129 SILMEYMDAGSLEIYVKSR----------------GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEH 192 (300)
Q Consensus 129 ~lv~e~~~~~~L~~~l~~~----------------~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~ 192 (300)
++||||+++++|.+++... +.+++..++.++.||+.||.|||++|++||||||+||+++.++..
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~ 162 (291)
T cd05094 83 IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLV 162 (291)
T ss_pred EEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcE
Confidence 9999999999999999753 237899999999999999999999999999999999999977654
Q ss_pred Cccce---------------------eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHH
Q 040812 193 PCGYS---------------------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLM 250 (300)
Q Consensus 193 ~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~ 250 (300)
.+.++ ..|.+||... +..++.++|||||||++|||+| |..||...... +..
T Consensus 163 ~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~----~~~ 235 (291)
T cd05094 163 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM---YRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT----EVI 235 (291)
T ss_pred EECCCCcccccCCCceeecCCCCCcceeecChHHhc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH----HHH
Confidence 32221 2245555433 4557789999999999999999 99999654332 222
Q ss_pred HHHhhCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 251 LAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
...........+...+..+.+++.+||.. ||++||++.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~-~P~~Rpt~~~v~~ 277 (291)
T cd05094 236 ECITQGRVLERPRVCPKEVYDIMLGCWQR-EPQQRLNIKEIYK 277 (291)
T ss_pred HHHhCCCCCCCCccCCHHHHHHHHHHccc-ChhhCcCHHHHHH
Confidence 33333444455666789999999999999 9999999999874
No 271
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=9.2e-40 Score=272.43 Aligned_cols=213 Identities=23% Similarity=0.311 Sum_probs=173.3
Q ss_pred CcceEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEeccCCCCHHHHHHhC
Q 040812 68 GNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSR 147 (300)
Q Consensus 68 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~ 147 (300)
|.||.||+++++.+++.||+|.+..... ..+|...+....||||+++++++.... ..|+||||+++++|.+++...
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~lv~e~~~~~~L~~~l~~~ 79 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSE---YSRERLTIIPHCVPNMVCLHKYIVSED-SVFLVLQHAEGGKLWSHISKF 79 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhh---hhhHHHHHHhcCCCceeehhhheecCC-eEEEEEecCCCCCHHHHHHHh
Confidence 8899999999999999999999875432 234666666678999999999988754 899999999999999999877
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce----------------eeccccccccccCC
Q 040812 148 GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS----------------CLYESGEARHRKHG 211 (300)
Q Consensus 148 ~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~----------------~~~~~~~~~~~~~~ 211 (300)
..+++..+..++.|++.||.|||+.|++||||||+||+++.++......+ ..|.+||... +
T Consensus 80 ~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~---~ 156 (237)
T cd05576 80 LNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGG---I 156 (237)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCcccC---C
Confidence 78999999999999999999999999999999999999998765432221 2355665432 4
Q ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCH---
Q 040812 212 GYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTA--- 288 (300)
Q Consensus 212 ~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~--- 288 (300)
..++.++||||+||++|||++|+.||...... .........|...++.++++|.+||+. ||++|+++
T Consensus 157 ~~~~~~~DvwslG~il~el~~g~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~li~~~l~~-dp~~R~~~~~~ 226 (237)
T cd05576 157 SEETEACDWWSLGAILFELLTGKTLVECHPSG---------INTHTTLNIPEWVSEEARSLLQQLLQF-NPTERLGAGVA 226 (237)
T ss_pred CCCCchhhHHHHHHHHHHHHHCcchhhcCchh---------cccccccCCcccCCHHHHHHHHHHccC-CHHHhcCCCcc
Confidence 45677999999999999999999888532111 011122345667889999999999999 99999986
Q ss_pred --HHHhcCCCC
Q 040812 289 --SQLLSHPFL 297 (300)
Q Consensus 289 --~~~l~hpw~ 297 (300)
+++++||||
T Consensus 227 ~~~~~~~h~~~ 237 (237)
T cd05576 227 GVEDIKSHPFF 237 (237)
T ss_pred chHHHHcCCCC
Confidence 999999998
No 272
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=6.2e-40 Score=277.09 Aligned_cols=229 Identities=21% Similarity=0.334 Sum_probs=185.2
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCC--CCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEE
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG--TPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILM 132 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~ 132 (300)
+..+|++.+.||+|+||.||+|.+.. ++.+|+|.+..... .....+|+.+++.++|+||+++++++.... ..++||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~lv~ 81 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGE-PVYIIT 81 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCC-CeEEEE
Confidence 34578999999999999999999988 88999999876543 223467999999999999999999987754 899999
Q ss_pred eccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce-------------
Q 040812 133 EYMDAGSLEIYVKSR--GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS------------- 197 (300)
Q Consensus 133 e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~------------- 197 (300)
||+++++|.+++... ..+++..+..++.||+.||.|||++|++|+||||+||+++.++...++++
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~ 161 (261)
T cd05148 82 ELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLS 161 (261)
T ss_pred eecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCccccc
Confidence 999999999999753 35899999999999999999999999999999999999998765433221
Q ss_pred ------eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHH
Q 040812 198 ------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFR 270 (300)
Q Consensus 198 ------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (300)
..|.+||... +..++.++||||||+++|+|++ |..||...... +.............+...++.+.
T Consensus 162 ~~~~~~~~~~~PE~~~---~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 234 (261)
T cd05148 162 SDKKIPYKWTAPEAAS---HGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH----EVYDQITAGYRMPCPAKCPQEIY 234 (261)
T ss_pred cCCCCceEecCHHHHc---cCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH----HHHHHHHhCCcCCCCCCCCHHHH
Confidence 1244454432 3456779999999999999998 89999654322 22222233444555677889999
Q ss_pred HHHHHHhccCCCCCCCCHHHHhc
Q 040812 271 DFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 271 ~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
++|.+||+. ||++|||+.++++
T Consensus 235 ~~i~~~l~~-~p~~Rpt~~~l~~ 256 (261)
T cd05148 235 KIMLECWAA-EPEDRPSFKALRE 256 (261)
T ss_pred HHHHHHcCC-CchhCcCHHHHHH
Confidence 999999999 9999999999875
No 273
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.6e-39 Score=276.75 Aligned_cols=230 Identities=23% Similarity=0.395 Sum_probs=181.7
Q ss_pred CCcceeeeeecCCcceEEEEEEEcc-----CCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCc
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQ-----TLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGE 127 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 127 (300)
.++|++.+.||+|+||.||+|+.+. +.+.+++|.+...... ..+.+|+.++++++|+||+++++++.... .
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~ 82 (275)
T cd05046 4 RSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAE-P 82 (275)
T ss_pred hHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCC-c
Confidence 3678999999999999999999764 3568999988654332 24577999999999999999999887654 8
Q ss_pred EEEEEeccCCCCHHHHHHhCC---------CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce-
Q 040812 128 VSILMEYMDAGSLEIYVKSRG---------RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS- 197 (300)
Q Consensus 128 ~~lv~e~~~~~~L~~~l~~~~---------~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~- 197 (300)
.|+||||+++++|.+++.... .+++..+..++.|++.||.|||+.|++||||||+||+++.++...++..
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~ 162 (275)
T cd05046 83 HYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLS 162 (275)
T ss_pred ceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccc
Confidence 999999999999999998655 6899999999999999999999999999999999999988765433221
Q ss_pred -------------------eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHh-hC
Q 040812 198 -------------------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAIC-FR 256 (300)
Q Consensus 198 -------------------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~-~~ 256 (300)
..|.+||... +...+.++|||||||++|+|++ |..||...... . ...... ..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~---~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~-~---~~~~~~~~~ 235 (275)
T cd05046 163 LSKDVYNSEYYKLRNALIPLRWLAPEAVQ---EDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE-E---VLNRLQAGK 235 (275)
T ss_pred cccccCcccccccCCceeEEeecChhhhc---cCCCCchhhHHHHHHHHHHHHhCCCCCccccchH-H---HHHHHHcCC
Confidence 1244555432 3446778999999999999998 88999654332 1 122211 12
Q ss_pred CCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcC
Q 040812 257 EPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 257 ~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~h 294 (300)
.....+...+..+.+++.+||.. ||++|||+.+++++
T Consensus 236 ~~~~~~~~~~~~l~~~i~~~l~~-~p~~Rp~~~~~l~~ 272 (275)
T cd05046 236 LELPVPEGCPSRLYKLMTRCWAV-NPKDRPSFSELVSA 272 (275)
T ss_pred cCCCCCCCCCHHHHHHHHHHcCC-CcccCCCHHHHHHH
Confidence 22334556789999999999999 99999999999864
No 274
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.9e-39 Score=276.42 Aligned_cols=230 Identities=23% Similarity=0.375 Sum_probs=183.6
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccC-----CeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCC
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQT-----LALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSG 126 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 126 (300)
..++|++.+.||+|+||.||+|.++.. +..||+|.+...... ..+.+|+.+++.++|+||+++++++....
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~- 82 (277)
T cd05032 4 PREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQ- 82 (277)
T ss_pred chHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCC-
Confidence 356899999999999999999998754 378999998644321 13457999999999999999999988764
Q ss_pred cEEEEEeccCCCCHHHHHHhC----------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc
Q 040812 127 EVSILMEYMDAGSLEIYVKSR----------GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY 196 (300)
Q Consensus 127 ~~~lv~e~~~~~~L~~~l~~~----------~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~ 196 (300)
..|+||||+++++|.+++... ..+++..+..++.||+.||.|||+.|++||||||+||+++.++...++.
T Consensus 83 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~d 162 (277)
T cd05032 83 PTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGD 162 (277)
T ss_pred CcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECC
Confidence 899999999999999999642 2367889999999999999999999999999999999999876654332
Q ss_pred ee---------------------eccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHh
Q 040812 197 SC---------------------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAIC 254 (300)
Q Consensus 197 ~~---------------------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~ 254 (300)
++ .|.+||.. .++.++.++|||||||++|||+| |..||...... .......
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~---~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~----~~~~~~~ 235 (277)
T cd05032 163 FGMTRDIYETDYYRKGGKGLLPVRWMAPESL---KDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE----EVLKFVI 235 (277)
T ss_pred cccchhhccCcccccCCCCCccccccCHHHH---hcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH----HHHHHHh
Confidence 21 24444443 24557789999999999999998 99999654322 2222333
Q ss_pred hCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 255 FREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 255 ~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
.......+...+..+.++|.+||.. +|++|||+.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~li~~~l~~-~p~~Rpt~~~l~~ 273 (277)
T cd05032 236 DGGHLDLPENCPDKLLELMRMCWQY-NPKMRPTFLEIVS 273 (277)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHcCC-ChhhCCCHHHHHH
Confidence 3445566777899999999999999 9999999999975
No 275
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=3.4e-39 Score=276.86 Aligned_cols=239 Identities=29% Similarity=0.449 Sum_probs=189.4
Q ss_pred cceeeeeecCCcceEEEEEEEc---cCCeEEEEEEeecCCCC------CCCHHHHHHHHhc-CCCceeEeceeeeCCCCc
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHK---QTLALYALKVMQCDRGT------PPNPQELNILRQT-NSPYIVKCHQIFTKPSGE 127 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~------~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 127 (300)
+|++.+.||+|+||.||+|.+. .+|+.||+|+++..... ..+.+|+.+++++ +|+||+.+++++..+. .
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~-~ 79 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDT-K 79 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCC-e
Confidence 4789999999999999999985 47899999998753321 2235699999999 5899999999988754 8
Q ss_pred EEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce----------
Q 040812 128 VSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS---------- 197 (300)
Q Consensus 128 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~---------- 197 (300)
.|+||||+++++|.+++.....+++..+..++.|++.||.|||+.|++||||||+|||++.++...+.++
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~ 159 (290)
T cd05613 80 LHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDE 159 (290)
T ss_pred EEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceeccccc
Confidence 9999999999999999988778999999999999999999999999999999999999988765433222
Q ss_pred ----------eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCCh
Q 040812 198 ----------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSE 267 (300)
Q Consensus 198 ----------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (300)
..|.+||..... ....+.++||||||+++|+|+||..||............... .....+..+...+.
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 237 (290)
T cd05613 160 VERAYSFCGTIEYMAPDIVRGG-DGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRR-ILKSEPPYPQEMSA 237 (290)
T ss_pred ccccccccCCcccCChhhccCC-CCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHH-hhccCCCCCccCCH
Confidence 223444443211 123466899999999999999999999654333233233222 22334455677889
Q ss_pred HHHHHHHHHhccCCCCCCC-----CHHHHhcCCCCCCC
Q 040812 268 KFRDFIRCCLQKGDPSKRW-----TASQLLSHPFLADA 300 (300)
Q Consensus 268 ~l~~li~~~l~~~dp~~Rp-----t~~~~l~hpw~~~~ 300 (300)
.+.+++.+||.. ||++|| +++++++||||+..
T Consensus 238 ~~~~ll~~~l~~-~p~~R~~~~~~~~~~l~~~~~~~~~ 274 (290)
T cd05613 238 LAKDIIQRLLMK-DPKKRLGCGPSDADEIKKHPFFQKI 274 (290)
T ss_pred HHHHHHHHHhcC-CHHHhcCCCCCCHHHHHcCcccccC
Confidence 999999999999 999997 89999999999763
No 276
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=3.2e-39 Score=271.66 Aligned_cols=231 Identities=29% Similarity=0.452 Sum_probs=188.6
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC----CCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP----PNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
+|++.+.||+|+||.||++.++.+++.+|+|.+....... .+.+|+.++++++|+||+++++++... ...|+|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~~v~e 79 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDG-NKLCIVME 79 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccC-CEEEEEeh
Confidence 5889999999999999999999999999999987543222 235689999999999999999998775 48999999
Q ss_pred ccCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-------------
Q 040812 134 YMDAGSLEIYVKS----RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY------------- 196 (300)
Q Consensus 134 ~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~------------- 196 (300)
|+++++|.+++.. ...+++..+..++.|++.||.|||+.|++|+||+|+||+++.++...+.+
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~ 159 (256)
T cd08530 80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAK 159 (256)
T ss_pred hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccCCcc
Confidence 9999999999876 34689999999999999999999999999999999999999865443322
Q ss_pred ----eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHH
Q 040812 197 ----SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDF 272 (300)
Q Consensus 197 ----~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 272 (300)
...|.+||... +..++.++|+||||+++|+|++|+.||...+. ............+..+...+.+++++
T Consensus 160 ~~~~~~~~~~Pe~~~---~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l 232 (256)
T cd08530 160 TQIGTPHYMAPEVWK---GRPYSYKSDIWSLGCLLYEMATFAPPFEARSM----QDLRYKVQRGKYPPIPPIYSQDLQNF 232 (256)
T ss_pred cccCCccccCHHHHC---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHhcCCCCCCchhhCHHHHHH
Confidence 12334444432 44567799999999999999999999965432 22233333444555666788999999
Q ss_pred HHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 273 IRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 273 i~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
+.+||.. +|++||++.++++||++
T Consensus 233 i~~~l~~-~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 233 IRSMLQV-KPKLRPNCDKILASPAV 256 (256)
T ss_pred HHHHcCC-CcccCCCHHHHhcCCCC
Confidence 9999999 99999999999999985
No 277
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=2.4e-39 Score=273.84 Aligned_cols=228 Identities=24% Similarity=0.333 Sum_probs=179.6
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCC-CCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG-TPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
+.++|++.++||+|+||.||+|.+..++ .||+|.++.... ...+.+|+.++++++|+||+++++.+.. ...|+|||
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~-~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~--~~~~lv~e 80 (262)
T cd05071 4 PRESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVTE 80 (262)
T ss_pred ChHHeeEeeecCCCCCCcEEEEEecCCc-eEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEECC--CCcEEEEE
Confidence 4567999999999999999999987664 599999875333 2235679999999999999999998643 36899999
Q ss_pred ccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce--------------
Q 040812 134 YMDAGSLEIYVKSR--GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS-------------- 197 (300)
Q Consensus 134 ~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~-------------- 197 (300)
|+++++|.+++... ..+++..+..++.|++.||.|||+.+++|+||||+||+++.++...+..+
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~ 160 (262)
T cd05071 81 YMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 160 (262)
T ss_pred cCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeeccccccccc
Confidence 99999999999753 35889999999999999999999999999999999999988755432211
Q ss_pred ------eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHH
Q 040812 198 ------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFR 270 (300)
Q Consensus 198 ------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (300)
..|.+||.. .+..++.++|||||||++|+|+| |..||...... ..............+...+..+.
T Consensus 161 ~~~~~~~~y~~PE~~---~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~ 233 (262)
T cd05071 161 QGAKFPIKWTAPEAA---LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----EVLDQVERGYRMPCPPECPESLH 233 (262)
T ss_pred cCCcccceecCHhHh---ccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH----HHHHHHhcCCCCCCccccCHHHH
Confidence 124444433 24456789999999999999999 88899654332 22222222333344556789999
Q ss_pred HHHHHHhccCCCCCCCCHHHHhc
Q 040812 271 DFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 271 ~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
+++.+||.. ||++||++.++++
T Consensus 234 ~li~~~l~~-~p~~Rp~~~~~~~ 255 (262)
T cd05071 234 DLMCQCWRK-EPEERPTFEYLQA 255 (262)
T ss_pred HHHHHHccC-CcccCCCHHHHHH
Confidence 999999999 9999999998864
No 278
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=2.4e-39 Score=273.02 Aligned_cols=220 Identities=25% Similarity=0.350 Sum_probs=176.2
Q ss_pred eecCCcceEEEEEEE--ccCCeEEEEEEeecCCCCC----CCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEeccCC
Q 040812 64 VLGQGNGGTVFKVRH--KQTLALYALKVMQCDRGTP----PNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDA 137 (300)
Q Consensus 64 ~lg~G~~g~V~~~~~--~~~~~~vaiK~~~~~~~~~----~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~ 137 (300)
.||+|+||.||+|.+ ..++..+|+|+++...... .+.+|+.+++.+.|+||+++++++.. . ..++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~-~~~lv~e~~~~ 79 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA-E-SWMLVMELAEL 79 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-C-CcEEEEecCCC
Confidence 589999999999975 4567899999986544322 34578999999999999999998753 3 67999999999
Q ss_pred CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce--------------------
Q 040812 138 GSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS-------------------- 197 (300)
Q Consensus 138 ~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~-------------------- 197 (300)
++|.+++.....+++..+..++.|++.||.|||++|++||||||+||+++.++...++++
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~ 159 (257)
T cd05116 80 GPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGK 159 (257)
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCC
Confidence 999999987778999999999999999999999999999999999999987654332221
Q ss_pred --eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHH
Q 040812 198 --CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIR 274 (300)
Q Consensus 198 --~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 274 (300)
..|.+||.. .+..++.++|||||||++|||+| |..||...... .....+.....+..+...++++.++|.
T Consensus 160 ~~~~y~aPE~~---~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~----~~~~~i~~~~~~~~~~~~~~~l~~li~ 232 (257)
T cd05116 160 WPVKWYAPECM---NYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN----EVTQMIESGERMECPQRCPPEMYDLMK 232 (257)
T ss_pred CCccccCHhHh---ccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHHHHCCCCCCCCCCCCHHHHHHHH
Confidence 123344432 23456779999999999999998 99999654321 233333344456677788999999999
Q ss_pred HHhccCCCCCCCCHHHHhc
Q 040812 275 CCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 275 ~~l~~~dp~~Rpt~~~~l~ 293 (300)
+||+. ||++||++++|.+
T Consensus 233 ~~~~~-~p~~Rp~~~~i~~ 250 (257)
T cd05116 233 LCWTY-GVDERPGFAVVEL 250 (257)
T ss_pred HHhcc-CchhCcCHHHHHH
Confidence 99999 9999999999864
No 279
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=2.9e-39 Score=272.93 Aligned_cols=227 Identities=22% Similarity=0.339 Sum_probs=181.3
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
..++|++.+.||+|+||.||+|.+.. +..+|+|.+...... ..+.+|+.++++++|+|++++++++.. ...|+|||
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~~~~-~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~--~~~~lv~e 80 (260)
T cd05070 4 PRESLQLIKKLGNGQFGEVWMGTWNG-NTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVSE--EPIYIVTE 80 (260)
T ss_pred chHHhhhhheeccccCceEEEEEecC-CceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEECC--CCcEEEEE
Confidence 34679999999999999999998774 557899998754332 345689999999999999999998753 36899999
Q ss_pred ccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcccee-------------
Q 040812 134 YMDAGSLEIYVKSR--GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSC------------- 198 (300)
Q Consensus 134 ~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~------------- 198 (300)
|+++++|.+++... ..+++..++.++.|++.||.|||+.|++||||||+||++++++...++.++
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~ 160 (260)
T cd05070 81 YMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTAR 160 (260)
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccccc
Confidence 99999999999753 358999999999999999999999999999999999999987544322211
Q ss_pred -------eccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHH
Q 040812 199 -------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFR 270 (300)
Q Consensus 199 -------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (300)
.|.+||... +..++.++||||||+++|+|++ |..||...+.. ..............+...+..+.
T Consensus 161 ~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 233 (260)
T cd05070 161 QGAKFPIKWTAPEAAL---YGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR----EVLEQVERGYRMPCPQDCPISLH 233 (260)
T ss_pred cCCCCCccccChHHHh---cCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH----HHHHHHHcCCCCCCCCcCCHHHH
Confidence 244555432 4456779999999999999999 89999654322 22333333445556677889999
Q ss_pred HHHHHHhccCCCCCCCCHHHHh
Q 040812 271 DFIRCCLQKGDPSKRWTASQLL 292 (300)
Q Consensus 271 ~li~~~l~~~dp~~Rpt~~~~l 292 (300)
+++.+||.. ||++|||+.++.
T Consensus 234 ~li~~~l~~-~p~~Rpt~~~l~ 254 (260)
T cd05070 234 ELMLQCWKK-DPEERPTFEYLQ 254 (260)
T ss_pred HHHHHHccc-CcccCcCHHHHH
Confidence 999999999 999999999986
No 280
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=5.5e-39 Score=280.27 Aligned_cols=244 Identities=27% Similarity=0.358 Sum_probs=186.5
Q ss_pred CccCCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCC----CCCCHHHHHHHHhcCCCceeEeceeeeCCCC
Q 040812 51 QEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG----TPPNPQELNILRQTNSPYIVKCHQIFTKPSG 126 (300)
Q Consensus 51 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 126 (300)
......++|++.+.||.|+||.||+|.+..+++.||+|.+..... .....+|+.++++++||||+++++++.....
T Consensus 4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 83 (328)
T cd07856 4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE 83 (328)
T ss_pred ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence 344556789999999999999999999999999999998754322 2234579999999999999999999876555
Q ss_pred cEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc----------
Q 040812 127 EVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY---------- 196 (300)
Q Consensus 127 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~---------- 196 (300)
..|+||||+. ++|..++.. ..+++..+..++.|++.||.|||+.|++|+||+|+||+++.++...+.+
T Consensus 84 ~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~ 161 (328)
T cd07856 84 DIYFVTELLG-TDLHRLLTS-RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQ 161 (328)
T ss_pred cEEEEeehhc-cCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCCC
Confidence 7999999994 589888864 3688899999999999999999999999999999999998765443322
Q ss_pred ------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHH-------------------
Q 040812 197 ------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLML------------------- 251 (300)
Q Consensus 197 ------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~------------------- 251 (300)
...|.+||... .+..++.++|||||||++|+|+||+.||..............
T Consensus 162 ~~~~~~~~~y~aPE~~~--~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (328)
T cd07856 162 MTGYVSTRYYRAPEIML--TWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTL 239 (328)
T ss_pred cCCCcccccccCceeee--ccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhH
Confidence 22355555432 124567899999999999999999999965432111110000
Q ss_pred ----HHhhCCCCC---CCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 252 ----AICFREPPS---LPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 252 ----~~~~~~~~~---~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
......... .....++.+.++|.+||+. +|++||++++++.||||..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~-~P~~R~t~~ell~~~~~~~ 293 (328)
T cd07856 240 RFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVF-DPQKRISAAEALAHPYLAP 293 (328)
T ss_pred HHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCC-ChhhCCCHHHHhcCCcccc
Confidence 000000000 1124578899999999999 9999999999999999964
No 281
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-41 Score=284.78 Aligned_cols=240 Identities=25% Similarity=0.396 Sum_probs=204.9
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecC-----CCCCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEE
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCD-----RGTPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVS 129 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 129 (300)
..+.|...++||+||||.|+-++.+.||+-||+|.+.+. ......++|-.+|.+++.+.||.+-..|++.. .+|
T Consensus 183 t~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd-~LC 261 (591)
T KOG0986|consen 183 TKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKD-ALC 261 (591)
T ss_pred cccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCC-ceE
Confidence 345688899999999999999999999999999987543 33334578999999999999999998888765 899
Q ss_pred EEEeccCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCc-------------
Q 040812 130 ILMEYMDAGSLEIYVKSRG--RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPC------------- 194 (300)
Q Consensus 130 lv~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~------------- 194 (300)
+||..|.||+|.-++..-+ .|++..++.++.+|+.||.+||..+|+.|||||+|||+|+.+...+
T Consensus 262 lVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~ 341 (591)
T KOG0986|consen 262 LVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGK 341 (591)
T ss_pred EEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCCCC
Confidence 9999999999998887654 6999999999999999999999999999999999999999876532
Q ss_pred -----cceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHH
Q 040812 195 -----GYSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKF 269 (300)
Q Consensus 195 -----~~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 269 (300)
.++..|++||... ++.|+.+.|+|||||++|||+.|+.||........ .+.+.+.....+..+++..++++
T Consensus 342 ~~~~rvGT~GYMAPEvl~---ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk-~eEvdrr~~~~~~ey~~kFS~ea 417 (591)
T KOG0986|consen 342 PIRGRVGTVGYMAPEVLQ---NEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVK-REEVDRRTLEDPEEYSDKFSEEA 417 (591)
T ss_pred ccccccCcccccCHHHHc---CCcccCCccHHHHHhHHHHHHcccCchhhhhhhhh-HHHHHHHHhcchhhcccccCHHH
Confidence 2466688888876 44588999999999999999999999976544332 23444555677788899999999
Q ss_pred HHHHHHHhccCCCCCCC-----CHHHHhcCCCCCCC
Q 040812 270 RDFIRCCLQKGDPSKRW-----TASQLLSHPFLADA 300 (300)
Q Consensus 270 ~~li~~~l~~~dp~~Rp-----t~~~~l~hpw~~~~ 300 (300)
+++...+|.+ ||++|. +++++.+||||+++
T Consensus 418 kslc~~LL~K-dp~~RLGcrg~ga~evk~HpfFk~l 452 (591)
T KOG0986|consen 418 KSLCEGLLTK-DPEKRLGCRGEGAQEVKEHPFFKDL 452 (591)
T ss_pred HHHHHHHHcc-CHHHhccCCCcCcchhhhCcccccC
Confidence 9999999999 999998 48899999999874
No 282
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-40 Score=289.81 Aligned_cols=229 Identities=25% Similarity=0.386 Sum_probs=186.8
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHh-cCCCceeEeceeeeCCCCcEEEEEe
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQ-TNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
....|++...+|.|+|+.|..+.+..+++..++|++.... ....+|+.++.. -+||||+++++.+.+.. ..|+|||
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~--~~~~~e~~~~~~~~~h~niv~~~~v~~~~~-~~~~v~e 396 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA--DDNQDEIPISLLVRDHPNIVKSHDVYEDGK-EIYLVME 396 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc--cccccccchhhhhcCCCcceeecceecCCc-eeeeeeh
Confidence 4678999999999999999999999999999999997652 233457755544 48999999999998765 8999999
Q ss_pred ccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeec-CCCCCCcc----------------c
Q 040812 134 YMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLIN-EKMEHPCG----------------Y 196 (300)
Q Consensus 134 ~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~-~~~~~~~~----------------~ 196 (300)
++.|+-|.+.+.....+. ..+..|+.+|+.|+.|||++|++||||||+|||++ ..+...+. .
T Consensus 397 ~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~tp~~ 475 (612)
T KOG0603|consen 397 LLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCDTPAL 475 (612)
T ss_pred hccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchhhcccch
Confidence 999998888887765555 88889999999999999999999999999999994 54433221 1
Q ss_pred eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHH
Q 040812 197 SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276 (300)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 276 (300)
+..|.+||... ...++.++||||||++||+|+||+.||...... .++...+. .+.+...+|+.+++||.+|
T Consensus 476 t~~y~APEvl~---~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~---~ei~~~i~---~~~~s~~vS~~AKdLl~~L 546 (612)
T KOG0603|consen 476 TLQYVAPEVLA---IQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG---IEIHTRIQ---MPKFSECVSDEAKDLLQQL 546 (612)
T ss_pred hhcccChhhhc---cCCCCcchhhHHHHHHHHHHHhCCCccccCCch---HHHHHhhc---CCccccccCHHHHHHHHHh
Confidence 23355665554 556889999999999999999999999765443 23333322 3344488999999999999
Q ss_pred hccCCCCCCCCHHHHhcCCCC
Q 040812 277 LQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 277 l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
|+. ||.+|+++.+++.||||
T Consensus 547 L~~-dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 547 LQV-DPALRLGADEIGAHPWF 566 (612)
T ss_pred ccC-ChhhCcChhhhccCcch
Confidence 999 99999999999999999
No 283
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=2.3e-39 Score=275.20 Aligned_cols=228 Identities=22% Similarity=0.333 Sum_probs=179.1
Q ss_pred ceeeeeecCCcceEEEEEEEcc---CCeEEEEEEeecCCCCC----CCHHHHHHHHhcCCCceeEeceeeeCCCC-----
Q 040812 59 LEKLQVLGQGNGGTVFKVRHKQ---TLALYALKVMQCDRGTP----PNPQELNILRQTNSPYIVKCHQIFTKPSG----- 126 (300)
Q Consensus 59 y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~----~~~~E~~~l~~l~h~niv~~~~~~~~~~~----- 126 (300)
|++.+.||+|+||.||+|.... ++..||+|.++.+.... .+.+|+..++.++|+||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 5678999999999999999764 34789999987543322 34679999999999999999998754331
Q ss_pred cEEEEEeccCCCCHHHHHHhC------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcccee--
Q 040812 127 EVSILMEYMDAGSLEIYVKSR------GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSC-- 198 (300)
Q Consensus 127 ~~~lv~e~~~~~~L~~~l~~~------~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~-- 198 (300)
..++||||+++++|..++... ..+++..+..++.|++.||.|||+.+++||||||+||++++++...+..++
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 160 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLS 160 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccce
Confidence 379999999999999988542 258999999999999999999999999999999999999887554332221
Q ss_pred -------------------eccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCC
Q 040812 199 -------------------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREP 258 (300)
Q Consensus 199 -------------------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 258 (300)
.|.+||.. .+..++.++|||||||++|||++ |..||...... ...........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~---~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~----~~~~~~~~~~~ 233 (273)
T cd05035 161 KKIYSGDYYRQGRIAKMPVKWIAIESL---ADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH----EIYDYLRHGNR 233 (273)
T ss_pred eeccccccccccccccCCccccCHhhc---ccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH----HHHHHHHcCCC
Confidence 12333322 24556789999999999999999 89999654322 23333344455
Q ss_pred CCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcC
Q 040812 259 PSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 259 ~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~h 294 (300)
...+...++.+.+++.+||.. ||++|||+.+++++
T Consensus 234 ~~~~~~~~~~~~~li~~~l~~-~p~~Rp~~~e~~~~ 268 (273)
T cd05035 234 LKQPEDCLDELYDLMYSCWRA-DPKDRPTFTKLREV 268 (273)
T ss_pred CCCCcCCCHHHHHHHHHHcCC-ChhhCcCHHHHHHH
Confidence 666778899999999999999 99999999999864
No 284
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.2e-39 Score=278.56 Aligned_cols=231 Identities=23% Similarity=0.323 Sum_probs=183.4
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccC-----CeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCC
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQT-----LALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSG 126 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 126 (300)
++++|++.+.||+|+||.||+|.+..+ ++.||+|+++..... ..+.+|+.++.+++||||+++++++....
T Consensus 3 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~- 81 (283)
T cd05091 3 NLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQ- 81 (283)
T ss_pred CHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCC-
Confidence 346789999999999999999997643 578999998754322 22456899999999999999999987755
Q ss_pred cEEEEEeccCCCCHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCC
Q 040812 127 EVSILMEYMDAGSLEIYVKSR----------------GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKM 190 (300)
Q Consensus 127 ~~~lv~e~~~~~~L~~~l~~~----------------~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~ 190 (300)
..++++||+.+++|.+++... ..+++..+..++.|++.||.|||++|++||||||+||+++.++
T Consensus 82 ~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~ 161 (283)
T cd05091 82 PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKL 161 (283)
T ss_pred ceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCC
Confidence 799999999999999998532 2478888999999999999999999999999999999998775
Q ss_pred CCCcccee---------------------eccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHH
Q 040812 191 EHPCGYSC---------------------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLS 248 (300)
Q Consensus 191 ~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~ 248 (300)
...+++++ .|.+||... ++.++.++|||||||++|||+| |..||...... .
T Consensus 162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~----~ 234 (283)
T cd05091 162 NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIM---YGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ----D 234 (283)
T ss_pred ceEecccccccccccchheeeccCccCCccccCHHHHh---cCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH----H
Confidence 54333222 244555432 4556789999999999999998 88888654322 2
Q ss_pred HHHHHhhCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcC
Q 040812 249 LMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~h 294 (300)
....+........+..++..+.+++.+||+. +|++||++.+++..
T Consensus 235 ~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~-~p~~RP~~~~i~~~ 279 (283)
T cd05091 235 VIEMIRNRQVLPCPDDCPAWVYTLMLECWNE-FPSRRPRFKDIHSR 279 (283)
T ss_pred HHHHHHcCCcCCCCCCCCHHHHHHHHHHhCC-CcccCCCHHHHHHH
Confidence 3333334444556778899999999999999 99999999999864
No 285
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=4.1e-40 Score=278.10 Aligned_cols=225 Identities=26% Similarity=0.446 Sum_probs=175.4
Q ss_pred eeeeeecCCcceEEEEEEEc----cCCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEE
Q 040812 60 EKLQVLGQGNGGTVFKVRHK----QTLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILM 132 (300)
Q Consensus 60 ~~~~~lg~G~~g~V~~~~~~----~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~ 132 (300)
.+.+.||+|.||.||+|.+. ..+..|+||.++..... ..+.+|++.+++++||||+++++++.... ..++||
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~-~~~lv~ 80 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENE-PLFLVM 80 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSS-SEEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccc-cccccc
Confidence 46789999999999999998 45678999999653322 34567999999999999999999998544 799999
Q ss_pred eccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccceee-----------
Q 040812 133 EYMDAGSLEIYVKSR--GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCL----------- 199 (300)
Q Consensus 133 e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~~----------- 199 (300)
||+++|+|.+++... ..+++..+..++.||+.||.|||+++++|+||+++||+++.++..+++.+..
T Consensus 81 e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~ 160 (259)
T PF07714_consen 81 EYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYK 160 (259)
T ss_dssp E--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999886 6799999999999999999999999999999999999999876654433222
Q ss_pred ----------ccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChH
Q 040812 200 ----------YESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEK 268 (300)
Q Consensus 200 ----------~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (300)
|.+||... +..++.++||||||+++|||+| |+.||..... ...............+..++..
T Consensus 161 ~~~~~~~~~~~~aPE~~~---~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 233 (259)
T PF07714_consen 161 NDSSQQLPLRYLAPEVLK---DGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN----EEIIEKLKQGQRLPIPDNCPKD 233 (259)
T ss_dssp ESTTSESGGGGS-HHHHH---HSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH----HHHHHHHHTTEETTSBTTSBHH
T ss_pred cccccccccccccccccc---ccccccccccccccccccccccccccccccccc----ccccccccccccceeccchhHH
Confidence 23333322 2336789999999999999999 7899865422 2333444445556667788999
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 269 FRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 269 l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
+.++|.+||.. ||++|||+.++++
T Consensus 234 ~~~li~~C~~~-~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 234 IYSLIQQCWSH-DPEKRPSFQEILQ 257 (259)
T ss_dssp HHHHHHHHT-S-SGGGS--HHHHHH
T ss_pred HHHHHHHHcCC-ChhhCcCHHHHHh
Confidence 99999999999 9999999999975
No 286
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=2.1e-39 Score=281.61 Aligned_cols=229 Identities=21% Similarity=0.295 Sum_probs=179.9
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeE----EEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcE
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLAL----YALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEV 128 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~----vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 128 (300)
..+|++.+.||+|+||.||+|.+..+++. ||+|.++..... ..+.+|+.+++.++||||+++++++... ..
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~--~~ 83 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS--TV 83 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC--Cc
Confidence 45799999999999999999998765553 899998643321 2346789999999999999999988753 57
Q ss_pred EEEEeccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce----------
Q 040812 129 SILMEYMDAGSLEIYVKSR-GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS---------- 197 (300)
Q Consensus 129 ~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~---------- 197 (300)
++|+||+++|+|.+++... ..++...+..++.||+.||.|||++||+||||||+|||++.++...+.++
T Consensus 84 ~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 163 (316)
T cd05108 84 QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADE 163 (316)
T ss_pred eeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccCCC
Confidence 8999999999999999864 36889999999999999999999999999999999999988755433221
Q ss_pred -----------eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCC
Q 040812 198 -----------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265 (300)
Q Consensus 198 -----------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (300)
..|.+||... +..++.++|||||||++|||+| |..||...... . .............+..+
T Consensus 164 ~~~~~~~~~~~~~y~apE~~~---~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~-~---~~~~~~~~~~~~~~~~~ 236 (316)
T cd05108 164 KEYHAEGGKVPIKWMALESIL---HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-E---ISSILEKGERLPQPPIC 236 (316)
T ss_pred cceeccCCccceeecChHHhc---cCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH-H---HHHHHhCCCCCCCCCCC
Confidence 1244444332 4556789999999999999998 99999653221 1 22222223334445667
Q ss_pred ChHHHHHHHHHhccCCCCCCCCHHHHhcC
Q 040812 266 SEKFRDFIRCCLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 266 ~~~l~~li~~~l~~~dp~~Rpt~~~~l~h 294 (300)
+.++.+++.+||.. ||++||++.+++.+
T Consensus 237 ~~~~~~li~~cl~~-~p~~Rps~~~l~~~ 264 (316)
T cd05108 237 TIDVYMIMVKCWMI-DADSRPKFRELIIE 264 (316)
T ss_pred CHHHHHHHHHHccC-ChhhCcCHHHHHHH
Confidence 88999999999999 99999999999865
No 287
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=1.3e-39 Score=282.61 Aligned_cols=228 Identities=29% Similarity=0.345 Sum_probs=169.8
Q ss_pred cceEEEEEEEccCCeEEEEEEeecCCCC----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEeccCCCCHHHHH
Q 040812 69 NGGTVFKVRHKQTLALYALKVMQCDRGT----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYV 144 (300)
Q Consensus 69 ~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l 144 (300)
++|.||.++...+++.||+|+++..... ..+.+|+.+++.++|+||+++++++.... ..+++|||+++++|.+++
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~-~~~~~~e~~~~~~l~~~l 90 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDS-ELYVVSPLMAYGSCEDLL 90 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCC-eEEEEEeccCCCCHHHHH
Confidence 4456677777778999999998765222 23467999999999999999999988765 899999999999999999
Q ss_pred HhC--CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce-------------------------
Q 040812 145 KSR--GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS------------------------- 197 (300)
Q Consensus 145 ~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~------------------------- 197 (300)
... ..+++..+..++.|++.||.|||+++|+||||||+||+++.++...+..+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (314)
T cd08216 91 KTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVK 170 (314)
T ss_pred HHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccc
Confidence 753 35899999999999999999999999999999999999987654432221
Q ss_pred -eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhh---------------------
Q 040812 198 -CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICF--------------------- 255 (300)
Q Consensus 198 -~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~--------------------- 255 (300)
..|.+||..... ...++.++|||||||++|||++|..||..........+.......
T Consensus 171 ~~~y~aPE~~~~~-~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (314)
T cd08216 171 NLPWLSPEVLQQN-LQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSS 249 (314)
T ss_pred cccccCHHHhcCC-CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCccccc
Confidence 124455543321 123567999999999999999999999754322211111110000
Q ss_pred --------CCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 256 --------REPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 256 --------~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
..........+.++.+++.+||.. ||++|||++++++||||+.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~-~P~~Rpt~~~ll~~p~~~~ 300 (314)
T cd08216 250 NEHPNNRDSVDHPYTRTFSEHFHQFVELCLQR-DPESRPSASQLLNHSFFKQ 300 (314)
T ss_pred ccccchhhhhhcchhhHHHHHHHHHHHHHhhc-CCCcCcCHHHHhcCchHhh
Confidence 000001112246788999999999 9999999999999999975
No 288
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=6.1e-39 Score=274.44 Aligned_cols=235 Identities=29% Similarity=0.427 Sum_probs=182.4
Q ss_pred ceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC----CCCHHHHHHHHhcCCCceeEeceeeeCC-CCcEEEEEe
Q 040812 59 LEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT----PPNPQELNILRQTNSPYIVKCHQIFTKP-SGEVSILME 133 (300)
Q Consensus 59 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~~lv~e 133 (300)
|++.+.||+|+||.||+|.+..+++.+|+|.+...... ..+.+|+.++++++|+|++++++++... .+..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 67889999999999999999999999999999865422 2346799999999999999999998765 258999999
Q ss_pred ccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc----------------
Q 040812 134 YMDAGSLEIYVKSR-GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY---------------- 196 (300)
Q Consensus 134 ~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~---------------- 196 (300)
|+++ +|.+++... ..+++..++.++.||+.||.|||+.|++|+||||+||++++++...+..
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~ 159 (287)
T cd07840 81 YMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYT 159 (287)
T ss_pred cccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCccccc
Confidence 9975 888888765 5799999999999999999999999999999999999999876543322
Q ss_pred ----eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCC--------------
Q 040812 197 ----SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREP-------------- 258 (300)
Q Consensus 197 ----~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~-------------- 258 (300)
...|.+||.... ...++.++||||||+++|||+||+.||.....................
T Consensus 160 ~~~~~~~y~~PE~~~~--~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (287)
T cd07840 160 NRVITLWYRPPELLLG--ATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFEN 237 (287)
T ss_pred ccccccccCCceeeEc--cccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhh
Confidence 122455554321 224577999999999999999999999654432211111111000000
Q ss_pred ------------CCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 259 ------------PSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 259 ------------~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
..+....+..+.+++.+||.. ||++||+++++++||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~-~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 238 LKPKKPYKRRLREFFKHLIDPSALDLLDKLLTL-DPKKRISADQALQHEYF 287 (287)
T ss_pred ccccccchhHHHHHhcccCCHHHHHHHHHHcCC-ChhhCcCHHHHhhCcCC
Confidence 001111378899999999999 99999999999999998
No 289
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=2e-39 Score=278.65 Aligned_cols=233 Identities=22% Similarity=0.330 Sum_probs=184.4
Q ss_pred cCCCCcceeeeeecCCcceEEEEEEEccC-----CeEEEEEEeecCCCCC---CCHHHHHHHHhc-CCCceeEeceeeeC
Q 040812 53 IDGLSQLEKLQVLGQGNGGTVFKVRHKQT-----LALYALKVMQCDRGTP---PNPQELNILRQT-NSPYIVKCHQIFTK 123 (300)
Q Consensus 53 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~~~~---~~~~E~~~l~~l-~h~niv~~~~~~~~ 123 (300)
....++|++.+.||+|+||.||++.+... ...+|+|.+....... .+.+|+.+++++ +|+||+++++++..
T Consensus 8 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 87 (293)
T cd05053 8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ 87 (293)
T ss_pred ccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC
Confidence 34567899999999999999999998643 3789999987543221 245799999999 79999999999876
Q ss_pred CCCcEEEEEeccCCCCHHHHHHh----------------CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeec
Q 040812 124 PSGEVSILMEYMDAGSLEIYVKS----------------RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLIN 187 (300)
Q Consensus 124 ~~~~~~lv~e~~~~~~L~~~l~~----------------~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~ 187 (300)
.. ..+++|||+++|+|..++.. ...+++..++.++.|++.||.|||+.||+||||||+||+++
T Consensus 88 ~~-~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~ 166 (293)
T cd05053 88 EG-PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVT 166 (293)
T ss_pred CC-CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEc
Confidence 54 89999999999999999964 23588999999999999999999999999999999999999
Q ss_pred CCCCCCcccee---------------------eccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCch
Q 040812 188 EKMEHPCGYSC---------------------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPD 245 (300)
Q Consensus 188 ~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~ 245 (300)
.++...+++++ .|.+||.. .+..++.++|||||||++|||++ |..||......
T Consensus 167 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~---~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-- 241 (293)
T cd05053 167 EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEAL---FDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE-- 241 (293)
T ss_pred CCCeEEeCccccccccccccceeccCCCCCCccccCHHHh---ccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHH--
Confidence 87654332221 24445543 24556789999999999999998 99999654322
Q ss_pred HHHHHHHHhhCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcC
Q 040812 246 FLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~h 294 (300)
..............+...+..+.+++.+||.. ||++|||+.+++++
T Consensus 242 --~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~-~p~~Rps~~eil~~ 287 (293)
T cd05053 242 --ELFKLLKEGYRMEKPQNCTQELYHLMRDCWHE-VPSQRPTFKQLVED 287 (293)
T ss_pred --HHHHHHHcCCcCCCCCCCCHHHHHHHHHHccc-CcccCcCHHHHHHH
Confidence 22222333444556667889999999999999 99999999999864
No 290
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-41 Score=279.10 Aligned_cols=237 Identities=27% Similarity=0.411 Sum_probs=185.5
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCC-CCCCCHHHHHHHHhcCC--C----ceeEeceeeeCCCCcE
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDR-GTPPNPQELNILRQTNS--P----YIVKCHQIFTKPSGEV 128 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~E~~~l~~l~h--~----niv~~~~~~~~~~~~~ 128 (300)
..+|+++..+|+|.||.|-.+.+.+++..||||+++.-. ......-|+++|+++.+ | -++++.+||.-. |++
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyr-ghi 166 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYR-GHI 166 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhcc-Cce
Confidence 578999999999999999999999999999999998643 33344569999999943 2 378888888764 599
Q ss_pred EEEEeccCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCC--------------
Q 040812 129 SILMEYMDAGSLEIYVKSRG--RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEH-------------- 192 (300)
Q Consensus 129 ~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~-------------- 192 (300)
|||+|.+ |-++.+++..+. +++...++.+..|++.+++|||+.+++|.||||+|||+.+....
T Consensus 167 Civfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~ 245 (415)
T KOG0671|consen 167 CIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRP 245 (415)
T ss_pred EEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceecc
Confidence 9999999 559999998754 68999999999999999999999999999999999999643110
Q ss_pred ---------Ccc-------------ceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHH
Q 040812 193 ---------PCG-------------YSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLM 250 (300)
Q Consensus 193 ---------~~~-------------~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~ 250 (300)
++| .+..|.+||... |-.+++++||||+||||+|++||...|...++. +.+..+
T Consensus 246 ~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViL---gLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~-EHLaMM 321 (415)
T KOG0671|consen 246 LKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVIL---GLGWSQPCDVWSIGCILVELYTGETLFQTHENL-EHLAMM 321 (415)
T ss_pred CCCcceEEEecCCcceeccCcceeeeccccCCchhee---ccCcCCccCceeeeeEEEEeeccceecccCCcH-HHHHHH
Confidence 111 233456666554 556889999999999999999999999765533 333444
Q ss_pred HHHhhCCCCC-----------------CCCC-------------------------CChHHHHHHHHHhccCCCCCCCCH
Q 040812 251 LAICFREPPS-----------------LPEC-------------------------SSEKFRDFIRCCLQKGDPSKRWTA 288 (300)
Q Consensus 251 ~~~~~~~~~~-----------------~~~~-------------------------~~~~l~~li~~~l~~~dp~~Rpt~ 288 (300)
..+....+.. .++. ....+.|||++||.. ||.+|+|+
T Consensus 322 erIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~f-DP~~RiTl 400 (415)
T KOG0671|consen 322 ERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEF-DPARRITL 400 (415)
T ss_pred HHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHcc-CccccccH
Confidence 4443222111 0110 023589999999999 99999999
Q ss_pred HHHhcCCCCCC
Q 040812 289 SQLLSHPFLAD 299 (300)
Q Consensus 289 ~~~l~hpw~~~ 299 (300)
.|+|.||||+.
T Consensus 401 ~EAL~HpFF~~ 411 (415)
T KOG0671|consen 401 REALSHPFFAR 411 (415)
T ss_pred HHHhcCHHhhc
Confidence 99999999974
No 291
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=6e-39 Score=271.06 Aligned_cols=229 Identities=24% Similarity=0.356 Sum_probs=184.2
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCC-CCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG-TPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
..++|++.+.||+|+||.||+|.+.+ ++.+|+|.+..... ...+.+|+.++++++|+||+++++++.... ..++|||
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~~-~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~~v~e 81 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWNG-TTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEE-PIYIVTE 81 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEcC-CceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCC-ceEEEEe
Confidence 45789999999999999999999865 57799999875433 234567999999999999999999987654 7999999
Q ss_pred ccCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcccee-------------
Q 040812 134 YMDAGSLEIYVKSRG--RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSC------------- 198 (300)
Q Consensus 134 ~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~------------- 198 (300)
|+++++|.+++.... .+++..+..++.|++.||.|||++|++|+||||+||+++.++...+++++
T Consensus 82 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~ 161 (261)
T cd05034 82 YMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAR 161 (261)
T ss_pred ccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchhhhhh
Confidence 999999999997643 68999999999999999999999999999999999999987665433221
Q ss_pred -------eccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHH
Q 040812 199 -------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFR 270 (300)
Q Consensus 199 -------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (300)
.|.+||... +...+.++|||||||++|+|+| |+.||...... ..............+...+..+.
T Consensus 162 ~~~~~~~~y~~PE~~~---~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 234 (261)
T cd05034 162 EGAKFPIKWTAPEAAN---YGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR----EVLEQVERGYRMPRPPNCPEELY 234 (261)
T ss_pred hccCCCccccCHHHhc---cCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHHHHcCCCCCCCCCCCHHHH
Confidence 234444332 4556789999999999999999 99999654322 22233333334455666788999
Q ss_pred HHHHHHhccCCCCCCCCHHHHhc
Q 040812 271 DFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 271 ~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
+++.+||.. ||++||+++++++
T Consensus 235 ~~i~~~l~~-~p~~Rp~~~~l~~ 256 (261)
T cd05034 235 DLMLQCWDK-DPEERPTFEYLQS 256 (261)
T ss_pred HHHHHHccc-CcccCCCHHHHHH
Confidence 999999999 9999999999863
No 292
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=3.9e-39 Score=278.15 Aligned_cols=232 Identities=23% Similarity=0.336 Sum_probs=182.3
Q ss_pred CCCCcceeeeeecCCcceEEEEEEE-----ccCCeEEEEEEeecCCCC---CCCHHHHHHHHhc-CCCceeEeceeeeCC
Q 040812 54 DGLSQLEKLQVLGQGNGGTVFKVRH-----KQTLALYALKVMQCDRGT---PPNPQELNILRQT-NSPYIVKCHQIFTKP 124 (300)
Q Consensus 54 ~~~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 124 (300)
...++|++.+.||+|+||.||++.+ ..++..||+|.++..... ..+.+|+.+++++ +|+||+++++++...
T Consensus 32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 111 (302)
T cd05055 32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIG 111 (302)
T ss_pred ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecC
Confidence 3456899999999999999999985 334668999998754322 2346799999999 799999999998765
Q ss_pred CCcEEEEEeccCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce-----
Q 040812 125 SGEVSILMEYMDAGSLEIYVKSRG--RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS----- 197 (300)
Q Consensus 125 ~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~----- 197 (300)
. ..|+||||+.+++|.+++.... .+++..+..++.|++.||.|||+++++|+||||+||+++.+....+.++
T Consensus 112 ~-~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~ 190 (302)
T cd05055 112 G-PILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARD 190 (302)
T ss_pred C-ceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCccccc
Confidence 4 8999999999999999997543 3899999999999999999999999999999999999987654322211
Q ss_pred ----------------eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCC
Q 040812 198 ----------------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPS 260 (300)
Q Consensus 198 ----------------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 260 (300)
..|.+||... +..++.++|||||||++|||+| |..||............. .......
T Consensus 191 ~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~---~~~~~~~ 264 (302)
T cd05055 191 IMNDSNYVVKGNARLPVKWMAPESIF---NCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLI---KEGYRMA 264 (302)
T ss_pred ccCCCceeecCCCCcccccCCHhhhc---cCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHH---HcCCcCC
Confidence 1234444332 4456779999999999999998 999997654433332222 2233344
Q ss_pred CCCCCChHHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 261 LPECSSEKFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 261 ~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
.+...++.+.+++.+||.. +|++|||+.++++
T Consensus 265 ~~~~~~~~~~~li~~cl~~-~p~~Rpt~~ell~ 296 (302)
T cd05055 265 QPEHAPAEIYDIMKTCWDA-DPLKRPTFKQIVQ 296 (302)
T ss_pred CCCCCCHHHHHHHHHHcCC-CchhCcCHHHHHH
Confidence 5566789999999999999 9999999999975
No 293
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=2.8e-39 Score=277.09 Aligned_cols=239 Identities=29% Similarity=0.455 Sum_probs=186.3
Q ss_pred cceeeeeecCCcceEEEEEEEc---cCCeEEEEEEeecCCC------CCCCHHHHHHHHhc-CCCceeEeceeeeCCCCc
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHK---QTLALYALKVMQCDRG------TPPNPQELNILRQT-NSPYIVKCHQIFTKPSGE 127 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~------~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 127 (300)
+|++.+.||+|+||.||++++. .+++.||+|+++.... ...+.+|+.++.++ +|+||+++++.+.... .
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~-~ 79 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDT-K 79 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCC-E
Confidence 4788999999999999999864 4578899999875322 12345799999999 5999999999987754 8
Q ss_pred EEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce----------
Q 040812 128 VSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS---------- 197 (300)
Q Consensus 128 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~---------- 197 (300)
.|+||||+.+++|.+++.....+++..++.++.|++.||.|||+.|++|+||||+||+++.++...+..+
T Consensus 80 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 159 (288)
T cd05583 80 LHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEE 159 (288)
T ss_pred EEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECcccccccccc
Confidence 9999999999999999987778999999999999999999999999999999999999987755332221
Q ss_pred ----------eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCCh
Q 040812 198 ----------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSE 267 (300)
Q Consensus 198 ----------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (300)
..|.+||..... ....+.++||||||+++|+|+||..||................. ...+..+...+.
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 237 (288)
T cd05583 160 EERAYSFCGTIEYMAPEVIRGG-SGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRIL-KSKPPFPKTMSA 237 (288)
T ss_pred ccccccccCCccccCHHHhcCC-CCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHH-ccCCCCCcccCH
Confidence 223344433211 11246789999999999999999999965433222222222222 333455667889
Q ss_pred HHHHHHHHHhccCCCCCCCC---HHHHhcCCCCCCC
Q 040812 268 KFRDFIRCCLQKGDPSKRWT---ASQLLSHPFLADA 300 (300)
Q Consensus 268 ~l~~li~~~l~~~dp~~Rpt---~~~~l~hpw~~~~ 300 (300)
.+.++|.+||+. ||++||| +.++++||||+++
T Consensus 238 ~l~~li~~~l~~-~p~~R~t~~~~~~~l~~~~~~~~ 272 (288)
T cd05583 238 EARDFIQKLLEK-DPKKRLGANGADEIKNHPFFQGI 272 (288)
T ss_pred HHHHHHHHHhcC-CHhhccCcchHHHHhcCcccccC
Confidence 999999999999 9999998 5678999999863
No 294
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=2.2e-39 Score=273.66 Aligned_cols=230 Identities=33% Similarity=0.492 Sum_probs=182.9
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-------CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEE
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-------PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSI 130 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~l 130 (300)
+|.+.+.||+|+||.||++.+..++..+++|+++..... .....|+.++++++||||+++++++.... ..++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~l 79 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERD-AFCI 79 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCC-ceEE
Confidence 588999999999999999999887777777776542211 11245889999999999999999987655 7999
Q ss_pred EEeccCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc----------
Q 040812 131 LMEYMDAGSLEIYVKS----RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY---------- 196 (300)
Q Consensus 131 v~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~---------- 196 (300)
||||+++++|.+++.. ...+++..++.++.|++.||.|||+.|++|+||||+||+++.+. ..+..
T Consensus 80 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~~~-~~l~d~g~~~~~~~~ 158 (260)
T cd08222 80 ITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKNNL-LKIGDFGVSRLLMGS 158 (260)
T ss_pred EEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeecCC-EeecccCceeecCCC
Confidence 9999999999988863 34689999999999999999999999999999999999997542 21111
Q ss_pred ---------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCCh
Q 040812 197 ---------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSE 267 (300)
Q Consensus 197 ---------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (300)
...|.+||... +..++.++|+||||+++|+|++|..||.... .............+..+...+.
T Consensus 159 ~~~~~~~~~~~~~~~pe~~~---~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 231 (260)
T cd08222 159 CDLATTFTGTPYYMSPEALK---HQGYDSKSDIWSLGCILYEMCCLAHAFEGQN----FLSVVLRIVEGPTPSLPETYSR 231 (260)
T ss_pred cccccCCCCCcCccCHHHHc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCcc----HHHHHHHHHcCCCCCCcchhcH
Confidence 11234444332 3445678999999999999999999995422 2233334444555666777889
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 268 KFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 268 ~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
++.++|.+||.. ||++||++.++++||||
T Consensus 232 ~~~~li~~~l~~-~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 232 QLNSIMQSMLNK-DPSLRPSAAEILRNPFI 260 (260)
T ss_pred HHHHHHHHHhcC-ChhhCcCHHHHhhCCCC
Confidence 999999999999 99999999999999997
No 295
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1.6e-39 Score=277.63 Aligned_cols=234 Identities=29% Similarity=0.450 Sum_probs=181.3
Q ss_pred ceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEec
Q 040812 59 LEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEY 134 (300)
Q Consensus 59 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~ 134 (300)
|++.+.||+|++|.||+|.+..+++.+++|.+...... ....+|+.++++++|+||+++++++.... ..++||||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~~v~e~ 79 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKG-DLYLVFEF 79 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCC-CEEEEEec
Confidence 56788999999999999999999999999998654332 23457999999999999999999987654 89999999
Q ss_pred cCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce----------------
Q 040812 135 MDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS---------------- 197 (300)
Q Consensus 135 ~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~---------------- 197 (300)
+++ +|.+++.. ...+++..+..++.|++.||.|||++|++|+||||+||+++.++...+..+
T Consensus 80 ~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~ 158 (283)
T cd05118 80 MDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHY 158 (283)
T ss_pred cCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCc
Confidence 976 88877765 357899999999999999999999999999999999999998655433221
Q ss_pred ---eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCC----------------
Q 040812 198 ---CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREP---------------- 258 (300)
Q Consensus 198 ---~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~---------------- 258 (300)
..|.+||.... ....+.++||||||+++|+|+||+.||...+................+
T Consensus 159 ~~~~~~~~PE~~~~--~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd05118 159 VVTRWYRAPELLLG--DKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFS 236 (283)
T ss_pred cCcccccCcHHHhc--CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhh
Confidence 22444554321 225678999999999999999999999654432222111111100000
Q ss_pred ---------CCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 259 ---------PSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 259 ---------~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
......++.++.++|.+||.. ||.+||+++++++||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~-~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 237 FPKKAGMPLPKLFPNASPQALDLLSQMLHY-DPHKRITAEQALAHPYF 283 (283)
T ss_pred hccccccCHHHhhhhhCHHHHHHHHHHhcc-CcccCcCHHHHhhCCCC
Confidence 011224578899999999999 99999999999999997
No 296
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=2.3e-39 Score=276.67 Aligned_cols=230 Identities=23% Similarity=0.361 Sum_probs=182.4
Q ss_pred CCCcceeeeeecCCcceEEEEEEEc-----cCCeEEEEEEeecCCC--CCCCHHHHHHHHhcCCCceeEeceeeeCCCCc
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHK-----QTLALYALKVMQCDRG--TPPNPQELNILRQTNSPYIVKCHQIFTKPSGE 127 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 127 (300)
...+|++.++||+|+||.||++... .++..+|+|.+..... ...+.+|+.+++.++|+||+++++++.... .
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 81 (280)
T cd05092 3 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGR-P 81 (280)
T ss_pred ChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCC-c
Confidence 3467899999999999999999753 3467899998764322 123567999999999999999999987754 7
Q ss_pred EEEEEeccCCCCHHHHHHhCC---------------CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCC
Q 040812 128 VSILMEYMDAGSLEIYVKSRG---------------RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEH 192 (300)
Q Consensus 128 ~~lv~e~~~~~~L~~~l~~~~---------------~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~ 192 (300)
.++||||+++++|.+++.... .+++..+..++.||+.||.|||+.|++||||||+|||+++++..
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 82 LLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCE
Confidence 999999999999999997542 47889999999999999999999999999999999999987554
Q ss_pred Ccccee---------------------eccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHH
Q 040812 193 PCGYSC---------------------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLM 250 (300)
Q Consensus 193 ~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~ 250 (300)
.+..++ .|.+||.. .+..++.++|||||||++|||++ |.+||...... ...
T Consensus 162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~---~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~----~~~ 234 (280)
T cd05092 162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESI---LYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNT----EAI 234 (280)
T ss_pred EECCCCceeEcCCCceeecCCCccccccccCHHHh---ccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHH----HHH
Confidence 332211 24444433 24557789999999999999998 99999654332 223
Q ss_pred HHHhhCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 251 LAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
...........+..+++.+.++|.+||+. ||++||++.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~-~P~~Rp~~~~l~~ 276 (280)
T cd05092 235 ECITQGRELERPRTCPPEVYAIMQGCWQR-EPQQRMVIKDIHS 276 (280)
T ss_pred HHHHcCccCCCCCCCCHHHHHHHHHHccC-ChhhCCCHHHHHH
Confidence 33333445556677889999999999999 9999999999874
No 297
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7.8e-40 Score=299.98 Aligned_cols=238 Identities=20% Similarity=0.240 Sum_probs=167.1
Q ss_pred CCcceeeeeecCCcceEEEEEEEccC-CeEEEEEEe------------------ecCC-CCCCCHHHHHHHHhcCCCcee
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQT-LALYALKVM------------------QCDR-GTPPNPQELNILRQTNSPYIV 115 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vaiK~~------------------~~~~-~~~~~~~E~~~l~~l~h~niv 115 (300)
.++|++++.||+|+||.||+|..+.. +...+.|.+ .... ....+.+|+.+|++++|+||+
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 56899999999999999999886532 222222211 1000 011235799999999999999
Q ss_pred EeceeeeCCCCcEEEEEeccCCCCHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCC
Q 040812 116 KCHQIFTKPSGEVSILMEYMDAGSLEIYVKSR-----GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKM 190 (300)
Q Consensus 116 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~ 190 (300)
++++++.... ..|+|++++.+ +|..++... .......++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 227 ~l~~~~~~~~-~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~ 304 (501)
T PHA03210 227 KIEEILRSEA-NTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDG 304 (501)
T ss_pred cEeEEEEECC-eeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC
Confidence 9999998765 89999999965 777776532 2244677889999999999999999999999999999998775
Q ss_pred CCCcc--------------------ceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCc---hHH
Q 040812 191 EHPCG--------------------YSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEP---DFL 247 (300)
Q Consensus 191 ~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~---~~~ 247 (300)
...+. ++..|.+||... +..++.++|||||||++|||++|..++....... ...
T Consensus 305 ~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~ 381 (501)
T PHA03210 305 KIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILA---GDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLL 381 (501)
T ss_pred CEEEEeCCCceecCcccccccccccCCcCCCCchhhc---CCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHH
Confidence 44322 223344555443 4557789999999999999999876543322211 111
Q ss_pred HHHHHHh--hC--------------------CCCCC-----CCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 248 SLMLAIC--FR--------------------EPPSL-----PECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 248 ~~~~~~~--~~--------------------~~~~~-----~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
+.+.... .. ....+ ....+.++.++|.+||+. ||++|||+.|++.||||.+
T Consensus 382 ~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~-DP~~Rpsa~elL~hp~f~~ 459 (501)
T PHA03210 382 KIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTF-DWHLRPGAAELLALPLFSA 459 (501)
T ss_pred HHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhcc-CcccCcCHHHHhhChhhhc
Confidence 1111100 00 00000 012456788899999999 9999999999999999975
No 298
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=5.5e-39 Score=270.81 Aligned_cols=221 Identities=25% Similarity=0.342 Sum_probs=177.9
Q ss_pred eeecCCcceEEEEEEEccCC---eEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEeccC
Q 040812 63 QVLGQGNGGTVFKVRHKQTL---ALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMD 136 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~~---~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~ 136 (300)
+.||+|+||.||+|.+..++ ..+|+|.+...... ..+.+|+.+++++.|+||+++++++.. ...++||||++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~v~e~~~ 78 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG--EPLMLVMELAP 78 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC--CceEEEEEeCC
Confidence 46999999999999876544 78999998755432 234679999999999999999998753 36899999999
Q ss_pred CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce-------------------
Q 040812 137 AGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS------------------- 197 (300)
Q Consensus 137 ~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~------------------- 197 (300)
+++|.+++.....+++..+..++.|++.||.|||..+++|+||||+||+++.++...+..+
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~ 158 (257)
T cd05060 79 LGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAG 158 (257)
T ss_pred CCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCc
Confidence 9999999988778999999999999999999999999999999999999988765332211
Q ss_pred ---eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHH
Q 040812 198 ---CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFI 273 (300)
Q Consensus 198 ---~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 273 (300)
..|.+||... +..++.++|||||||++|+|++ |..||..... ......+........+...+..++++|
T Consensus 159 ~~~~~y~aPE~~~---~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~li 231 (257)
T cd05060 159 RWPLKWYAPECIN---YGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG----AEVIAMLESGERLPRPEECPQEIYSIM 231 (257)
T ss_pred cccccccCHHHhc---CCCCCccchHHHHHHHHHHHHcCCCCCcccCCH----HHHHHHHHcCCcCCCCCCCCHHHHHHH
Confidence 1244455432 4556779999999999999998 9999965432 122333333444566677889999999
Q ss_pred HHHhccCCCCCCCCHHHHhc
Q 040812 274 RCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 274 ~~~l~~~dp~~Rpt~~~~l~ 293 (300)
.+||.. ||++||++.++++
T Consensus 232 ~~cl~~-~p~~Rp~~~~l~~ 250 (257)
T cd05060 232 LSCWKY-RPEDRPTFSELES 250 (257)
T ss_pred HHHhcC-ChhhCcCHHHHHH
Confidence 999999 9999999999874
No 299
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=3.2e-39 Score=279.45 Aligned_cols=237 Identities=27% Similarity=0.410 Sum_probs=185.7
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEE
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSI 130 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~l 130 (300)
...|+..+.||+|+||.||+|++..+++.+|+|.+...... ..+.+|+.+++.++|+|++++++++.... ..++
T Consensus 14 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~l 92 (308)
T cd06634 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH-TAWL 92 (308)
T ss_pred HHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCC-eeEE
Confidence 34588889999999999999999999999999998643221 12356999999999999999999988754 7999
Q ss_pred EEeccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-------------
Q 040812 131 LMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY------------- 196 (300)
Q Consensus 131 v~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~------------- 196 (300)
||||+.+ +|.+++.. ...+++..+..++.|++.||.|||+.+++||||||+||+++.++...+..
T Consensus 93 v~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 171 (308)
T cd06634 93 VMEYCLG-SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF 171 (308)
T ss_pred EEEccCC-CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCcccc
Confidence 9999974 77776653 44689999999999999999999999999999999999998876543222
Q ss_pred --eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCC-CCCCCChHHHHHH
Q 040812 197 --SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPS-LPECSSEKFRDFI 273 (300)
Q Consensus 197 --~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li 273 (300)
+..|.+||.......+..+.++|||||||++|+|++|..||...... ...........+. .+...+..+.++|
T Consensus 172 ~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~li 247 (308)
T cd06634 172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM----SALYHIAQNESPALQSGHWSEYFRNFV 247 (308)
T ss_pred cCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH----HHHHHHhhcCCCCcCcccccHHHHHHH
Confidence 23455666543222344677999999999999999999999654322 1222222222222 3446788899999
Q ss_pred HHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 274 RCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 274 ~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
.+||.. +|++||+++++++|||+.+
T Consensus 248 ~~cl~~-~P~~Rp~~~~ll~~~~~~~ 272 (308)
T cd06634 248 DSCLQK-IPQDRPTSEVLLKHRFVLR 272 (308)
T ss_pred HHHhhC-CcccCCCHHHHhhCccccc
Confidence 999999 9999999999999999864
No 300
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=3.7e-39 Score=273.67 Aligned_cols=229 Identities=24% Similarity=0.369 Sum_probs=181.5
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCe---EEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEE
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLA---LYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVS 129 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 129 (300)
.++|++.+.||+|+||.||+|.++.+++ .||+|.++..... ..+.+|+.++++++||||+++++++.... ..+
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~-~~~ 81 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSR-PVM 81 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCC-ceE
Confidence 4568999999999999999999987654 6999998654221 23467999999999999999999987654 899
Q ss_pred EEEeccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce-----------
Q 040812 130 ILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS----------- 197 (300)
Q Consensus 130 lv~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~----------- 197 (300)
+||||+++++|.+++.. .+.+++..++.++.|++.||.|||++|++|+||||+||+++.+....+..+
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~ 161 (269)
T cd05065 82 IITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS 161 (269)
T ss_pred EEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCcc
Confidence 99999999999999976 346899999999999999999999999999999999999987654322111
Q ss_pred -------------eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCC
Q 040812 198 -------------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPE 263 (300)
Q Consensus 198 -------------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (300)
..|.+||... +..++.++|||||||++|||++ |..||...... .....+........+.
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~---~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~----~~~~~i~~~~~~~~~~ 234 (269)
T cd05065 162 DPTYTSSLGGKIPIRWTAPEAIA---YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ----DVINAIEQDYRLPPPM 234 (269)
T ss_pred ccccccccCCCcceeecCHhHhc---cCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH----HHHHHHHcCCcCCCcc
Confidence 1244555433 4456779999999999999986 99999654322 2222222233344456
Q ss_pred CCChHHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 264 CSSEKFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 264 ~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
.++..+.+++.+||.. +|++||++.++++
T Consensus 235 ~~~~~~~~li~~~l~~-~p~~Rp~~~~i~~ 263 (269)
T cd05065 235 DCPTALHQLMLDCWQK-DRNARPKFGQIVS 263 (269)
T ss_pred cCCHHHHHHHHHHcCC-ChhhCcCHHHHHH
Confidence 6788999999999999 9999999999975
No 301
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=5.1e-39 Score=271.45 Aligned_cols=228 Identities=24% Similarity=0.398 Sum_probs=181.0
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
..++|++.++||+|+||.||+|..+. ++.||+|.+...... ..+.+|+.++++++|+||+++++++.. +..|+|||
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~-~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~v~e 80 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYYNG-HTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVTQ--EPIYIITE 80 (260)
T ss_pred chHHceeeeeeccCccceEEeeecCC-CceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEcc--CCcEEEEE
Confidence 34679999999999999999999764 678999998754432 245679999999999999999998743 36899999
Q ss_pred ccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce--------------
Q 040812 134 YMDAGSLEIYVKSR--GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS-------------- 197 (300)
Q Consensus 134 ~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~-------------- 197 (300)
|+.+++|.+++... ..+++..+..++.|++.||.|||+.|++|+||||+||+++.++...+.++
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~ 160 (260)
T cd05067 81 YMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAR 160 (260)
T ss_pred cCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccc
Confidence 99999999998653 36899999999999999999999999999999999999998754432221
Q ss_pred ------eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHH
Q 040812 198 ------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFR 270 (300)
Q Consensus 198 ------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (300)
..|.+||... +..++.++|||||||++|||++ |+.||..... .. .............+...+.++.
T Consensus 161 ~~~~~~~~y~~pe~~~---~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~ 233 (260)
T cd05067 161 EGAKFPIKWTAPEAIN---YGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN-PE---VIQNLERGYRMPRPDNCPEELY 233 (260)
T ss_pred cCCcccccccCHHHhc---cCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh-HH---HHHHHHcCCCCCCCCCCCHHHH
Confidence 1234444332 3456779999999999999999 9999965432 22 2222223334455677889999
Q ss_pred HHHHHHhccCCCCCCCCHHHHhc
Q 040812 271 DFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 271 ~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
++|.+||.. ||++||+++++++
T Consensus 234 ~li~~~l~~-~p~~Rp~~~~l~~ 255 (260)
T cd05067 234 ELMRLCWKE-KPEERPTFEYLRS 255 (260)
T ss_pred HHHHHHccC-ChhhCCCHHHHHH
Confidence 999999999 9999999999874
No 302
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=4.1e-39 Score=272.95 Aligned_cols=230 Identities=28% Similarity=0.384 Sum_probs=181.5
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv 131 (300)
++|++.+.||+|+||.||++.+..+++.+|+|.+...... ..+.+|+.+++.++|+||+++++++.... ..++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-~~~~v 80 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN-ELNIV 80 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCC-eEEEE
Confidence 5789999999999999999999989999999987643221 23457999999999999999999988754 89999
Q ss_pred EeccCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce----------
Q 040812 132 MEYMDAGSLEIYVKS----RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS---------- 197 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~---------- 197 (300)
|||+++++|.+++.. ...+++..++.++.||+.||.|||++|++|+||||+||+++.++...+..+
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd08229 81 LELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred EEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCC
Confidence 999999999998863 345899999999999999999999999999999999999987765432221
Q ss_pred ---------eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCC-CCCCCCCh
Q 040812 198 ---------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPP-SLPECSSE 267 (300)
Q Consensus 198 ---------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 267 (300)
..|.+||... +...+.++||||||+++|+|++|..||...... .............+ ..+...++
T Consensus 161 ~~~~~~~~~~~~~ape~~~---~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 235 (267)
T cd08229 161 TAAHSLVGTPYYMSPERIH---ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN--LYSLCKKIEQCDYPPLPSDHYSE 235 (267)
T ss_pred cccccccCCcCccCHHHhc---CCCccchhhHHHHHHHHHHHHhCCCCcccccch--HHHHhhhhhcCCCCCCCcccccH
Confidence 1234444432 345677899999999999999999999654322 22222222222222 33346788
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 268 KFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 268 ~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
.+++++.+||.. ||++|||++++++
T Consensus 236 ~~~~li~~~l~~-~p~~Rpt~~~i~~ 260 (267)
T cd08229 236 ELRQLVNMCINP-DPEKRPDITYVYD 260 (267)
T ss_pred HHHHHHHHhcCC-CcccCCCHHHHHH
Confidence 999999999999 9999999998764
No 303
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-40 Score=291.38 Aligned_cols=230 Identities=27% Similarity=0.362 Sum_probs=187.7
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCC----eEEEEEEeecCC-C----CCCCHHHHHHHHhcCCCceeEeceeeeCCC
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTL----ALYALKVMQCDR-G----TPPNPQELNILRQTNSPYIVKCHQIFTKPS 125 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~----~~vaiK~~~~~~-~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 125 (300)
.-++..+.++||+|+||.||+|+.+..+ ..||+|..+... . ...+.+|+++|++++|||||+++|+.....
T Consensus 155 ~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~ 234 (474)
T KOG0194|consen 155 SHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEE 234 (474)
T ss_pred eccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCC
Confidence 3345567799999999999999987532 238999987522 1 123467999999999999999999988765
Q ss_pred CcEEEEEeccCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccceee-----
Q 040812 126 GEVSILMEYMDAGSLEIYVKSRG-RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCL----- 199 (300)
Q Consensus 126 ~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~~----- 199 (300)
.+|+|||+|.||+|.++++..+ .++..+...++.+.+.||+|||+++++||||..+|+|++.+...++.++++
T Consensus 235 -Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~ 313 (474)
T KOG0194|consen 235 -PLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGS 313 (474)
T ss_pred -ccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccCCc
Confidence 8999999999999999999876 499999999999999999999999999999999999999876644443333
Q ss_pred --------------ccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHH-hhCCCCCCCC
Q 040812 200 --------------YESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAI-CFREPPSLPE 263 (300)
Q Consensus 200 --------------~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~ 263 (300)
|.+||... .+.+++++|||||||++||+++ |..||.+.... .....+ ..+.+...+.
T Consensus 314 ~~~~~~~~~klPirWLAPEtl~---~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~----~v~~kI~~~~~r~~~~~ 386 (474)
T KOG0194|consen 314 QYVMKKFLKKLPIRWLAPETLN---TGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY----EVKAKIVKNGYRMPIPS 386 (474)
T ss_pred ceeeccccccCcceecChhhhc---cCccccccchhheeeeEEeeeccCCCCCCCCCHH----HHHHHHHhcCccCCCCC
Confidence 44444443 3468889999999999999998 88899765432 333334 4566777788
Q ss_pred CCChHHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 264 CSSEKFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 264 ~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
..+..+..++.+||.. ||++||++.++.+
T Consensus 387 ~~p~~~~~~~~~c~~~-~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 387 KTPKELAKVMKQCWKK-DPEDRPTMSTIKK 415 (474)
T ss_pred CCHHHHHHHHHHhccC-ChhhccCHHHHHH
Confidence 8899999999999999 9999999998764
No 304
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.7e-39 Score=277.30 Aligned_cols=231 Identities=23% Similarity=0.335 Sum_probs=182.0
Q ss_pred CCCcceeeeeecCCcceEEEEEEEcc-------CCeEEEEEEeecCCCCC---CCHHHHHHHHhc-CCCceeEeceeeeC
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQ-------TLALYALKVMQCDRGTP---PNPQELNILRQT-NSPYIVKCHQIFTK 123 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~-------~~~~vaiK~~~~~~~~~---~~~~E~~~l~~l-~h~niv~~~~~~~~ 123 (300)
..++|.+.+.||+|+||.||++++.. ++..+|+|.++...... .+.+|+.+++++ +|+||+++++++..
T Consensus 16 ~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (307)
T cd05098 16 PRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 95 (307)
T ss_pred ehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec
Confidence 34689999999999999999998743 23579999987543221 245699999999 79999999999877
Q ss_pred CCCcEEEEEeccCCCCHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeec
Q 040812 124 PSGEVSILMEYMDAGSLEIYVKSR----------------GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLIN 187 (300)
Q Consensus 124 ~~~~~~lv~e~~~~~~L~~~l~~~----------------~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~ 187 (300)
.. ..|+||||+.+++|.+++... ..+++..+..++.|++.||.|||+.|++||||||+||+++
T Consensus 96 ~~-~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~ 174 (307)
T cd05098 96 DG-PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT 174 (307)
T ss_pred CC-ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEc
Confidence 54 899999999999999999753 2478899999999999999999999999999999999998
Q ss_pred CCCCCCccce---------------------eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCch
Q 040812 188 EKMEHPCGYS---------------------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPD 245 (300)
Q Consensus 188 ~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~ 245 (300)
.++...++.+ ..|.+||... +..++.++|||||||++|||++ |..||..... .
T Consensus 175 ~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~-~- 249 (307)
T cd05098 175 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF---DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV-E- 249 (307)
T ss_pred CCCcEEECCCcccccccccchhhccccCCCccceeChHHhc---cCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH-H-
Confidence 7654322211 1345555443 4556789999999999999998 8899854322 1
Q ss_pred HHHHHHHHhhCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcC
Q 040812 246 FLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~h 294 (300)
..............+...+.++.++|.+||.. +|++|||+.+++++
T Consensus 250 --~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~-~p~~Rps~~evl~~ 295 (307)
T cd05098 250 --ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHA-VPSQRPTFKQLVED 295 (307)
T ss_pred --HHHHHHHcCCCCCCCCcCCHHHHHHHHHHccc-ChhhCcCHHHHHHH
Confidence 22222333444566777889999999999999 99999999999864
No 305
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=4.1e-39 Score=287.08 Aligned_cols=233 Identities=25% Similarity=0.293 Sum_probs=181.2
Q ss_pred CCCCcceeeeeecCCcceEEEEEEEc-----cCCeEEEEEEeecCCCCC---CCHHHHHHHHhcC-CCceeEeceeeeCC
Q 040812 54 DGLSQLEKLQVLGQGNGGTVFKVRHK-----QTLALYALKVMQCDRGTP---PNPQELNILRQTN-SPYIVKCHQIFTKP 124 (300)
Q Consensus 54 ~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~---~~~~E~~~l~~l~-h~niv~~~~~~~~~ 124 (300)
...++|.+.+.||+|+||.||+|++. .+++.||+|+++...... .+.+|+.+|.++. ||||+++++++...
T Consensus 34 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~ 113 (401)
T cd05107 34 MPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKG 113 (401)
T ss_pred ecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC
Confidence 34567889999999999999999964 345789999997543322 3457999999997 99999999998775
Q ss_pred CCcEEEEEeccCCCCHHHHHHhCC--------------------------------------------------------
Q 040812 125 SGEVSILMEYMDAGSLEIYVKSRG-------------------------------------------------------- 148 (300)
Q Consensus 125 ~~~~~lv~e~~~~~~L~~~l~~~~-------------------------------------------------------- 148 (300)
. ..++||||+++|+|.+++...+
T Consensus 114 ~-~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (401)
T cd05107 114 G-PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPM 192 (401)
T ss_pred C-CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccch
Confidence 4 8999999999999999996431
Q ss_pred ------------------------------------------CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceee
Q 040812 149 ------------------------------------------RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLI 186 (300)
Q Consensus 149 ------------------------------------------~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill 186 (300)
.+++..+..++.||+.||.|||+.+++||||||+|||+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl 272 (401)
T cd05107 193 QDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLI 272 (401)
T ss_pred hcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEE
Confidence 25667788899999999999999999999999999999
Q ss_pred cCCCCCCccce---------------------eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCc
Q 040812 187 NEKMEHPCGYS---------------------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEP 244 (300)
Q Consensus 187 ~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~ 244 (300)
+.+....+.++ ..|.+||... +..++.++|||||||++|||++ |..||.......
T Consensus 273 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~ 349 (401)
T cd05107 273 CEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIF---NNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNE 349 (401)
T ss_pred eCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhc---CCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchH
Confidence 87654322211 1234444332 3456789999999999999998 899996544332
Q ss_pred hHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcC
Q 040812 245 DFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~h 294 (300)
... ..+.....+..+..++.++.+++.+||.. +|++||++.++++.
T Consensus 350 ~~~---~~~~~~~~~~~p~~~~~~l~~li~~cl~~-~P~~RPs~~ell~~ 395 (401)
T cd05107 350 QFY---NAIKRGYRMAKPAHASDEIYEIMQKCWEE-KFEIRPDFSQLVHL 395 (401)
T ss_pred HHH---HHHHcCCCCCCCCCCCHHHHHHHHHHcCC-ChhHCcCHHHHHHH
Confidence 222 22223344556677889999999999999 99999999999864
No 306
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=3.7e-39 Score=276.94 Aligned_cols=231 Identities=27% Similarity=0.404 Sum_probs=181.9
Q ss_pred ceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC--CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEeccC
Q 040812 59 LEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMD 136 (300)
Q Consensus 59 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~ 136 (300)
|+....||+|+||.||++....+++.||+|.+...... ..+.+|+.+++.++|+|++++++.+.... ..|+||||++
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~e~~~ 100 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD-ELWVVMEFLE 100 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCC-EEEEEEecCC
Confidence 34457899999999999999999999999987533221 22457999999999999999999988765 8999999999
Q ss_pred CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce-------------------
Q 040812 137 AGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS------------------- 197 (300)
Q Consensus 137 ~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~------------------- 197 (300)
+++|.+++.. +.+++..+..++.|++.||+|||+.|++|+||+|+||+++.++...+.++
T Consensus 101 ~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 179 (292)
T cd06657 101 GGALTDIVTH-TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGT 179 (292)
T ss_pred CCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccccccccccccC
Confidence 9999998754 46899999999999999999999999999999999999998754433221
Q ss_pred eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCC--CCCCCChHHHHHHHH
Q 040812 198 CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPS--LPECSSEKFRDFIRC 275 (300)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~ 275 (300)
..|.+||... +..++.++|+||||+++|+|++|..||...... ..........+.. .....+..+.+++.+
T Consensus 180 ~~y~~pE~~~---~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 252 (292)
T cd06657 180 PYWMAPELIS---RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL----KAMKMIRDNLPPKLKNLHKVSPSLKGFLDR 252 (292)
T ss_pred ccccCHHHhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHhhCCcccCCcccCCHHHHHHHHH
Confidence 1244444332 344577999999999999999999999653322 1111111122222 233568899999999
Q ss_pred HhccCCCCCCCCHHHHhcCCCCCC
Q 040812 276 CLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 276 ~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
||.. ||.+||++.++++||||.+
T Consensus 253 ~l~~-~P~~R~~~~~ll~~~~~~~ 275 (292)
T cd06657 253 LLVR-DPAQRATAAELLKHPFLAK 275 (292)
T ss_pred HHhC-CcccCcCHHHHhcChHHhc
Confidence 9999 9999999999999999975
No 307
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=5.2e-39 Score=276.60 Aligned_cols=240 Identities=33% Similarity=0.565 Sum_probs=183.8
Q ss_pred CCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC---CCHHHHHHHHhcC-CCceeEeceeeeCCCCcEE
Q 040812 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP---PNPQELNILRQTN-SPYIVKCHQIFTKPSGEVS 129 (300)
Q Consensus 54 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~ 129 (300)
...++|++.+.||+|+||.||+|.+..+++.||+|.++...... ....|+.++.+.. |+||+++++++.... ..|
T Consensus 12 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~-~~~ 90 (296)
T cd06618 12 ADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDS-DVF 90 (296)
T ss_pred CCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCC-eEE
Confidence 45688999999999999999999999989999999987543221 1244666666654 999999999988755 899
Q ss_pred EEEeccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCceeecCCCCCCccce----------
Q 040812 130 ILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHS-RNIVHRDIKPANVLINEKMEHPCGYS---------- 197 (300)
Q Consensus 130 lv~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~-~~i~H~Dlkp~Nill~~~~~~~~~~~---------- 197 (300)
+||||+.+ +|.+++.. ...+++..+..++.||+.||.|||+ .|++||||+|+||+++.++...+.++
T Consensus 91 ~v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~ 169 (296)
T cd06618 91 ICMELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK 169 (296)
T ss_pred EEeeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCC
Confidence 99999965 77777765 4578999999999999999999997 59999999999999987755433322
Q ss_pred --------eeccccccccccC-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCC--CCCC
Q 040812 198 --------CLYESGEARHRKH-GGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLP--ECSS 266 (300)
Q Consensus 198 --------~~~~~~~~~~~~~-~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 266 (300)
..|.+||...... .+.++.++||||||+++|+|++|+.||....... ...........+..+ ...+
T Consensus 170 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 246 (296)
T cd06618 170 AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEF---EVLTKILQEEPPSLPPNEGFS 246 (296)
T ss_pred cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHH---HHHHHHhcCCCCCCCCCCCCC
Confidence 2345555543211 2336679999999999999999999996532221 222222222222222 2468
Q ss_pred hHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 267 EKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 267 ~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
+++.+||.+||.. ||++||+++++++||||..
T Consensus 247 ~~l~~li~~~l~~-~p~~Rp~~~~il~~~~~~~ 278 (296)
T cd06618 247 PDFCSFVDLCLTK-DHRKRPKYRELLQHPFIRR 278 (296)
T ss_pred HHHHHHHHHHccC-ChhhCCCHHHHhcChhhhc
Confidence 8999999999999 9999999999999999964
No 308
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=5.6e-39 Score=269.37 Aligned_cols=223 Identities=34% Similarity=0.522 Sum_probs=183.7
Q ss_pred ecCCcceEEEEEEEccCCeEEEEEEeecCCCCC-----CCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEeccCCCC
Q 040812 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP-----PNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGS 139 (300)
Q Consensus 65 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~~~ 139 (300)
||+|+||.||++.+..+++.+|+|.+....... .+.+|+.++++++|+||+++++.+.... ..|+||||+++++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~~v~e~~~~~~ 79 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEE-KLYLVLEYAPGGE 79 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCC-eeEEEEecCCCCc
Confidence 699999999999999889999999987654322 3467999999999999999999987654 8999999999999
Q ss_pred HHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-------------------eeec
Q 040812 140 LEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY-------------------SCLY 200 (300)
Q Consensus 140 L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~-------------------~~~~ 200 (300)
|.+++.....+++..+..++.|++.||.|||+.+++|+||+|+||+++.++...++. ...|
T Consensus 80 L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~ 159 (250)
T cd05123 80 LFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEY 159 (250)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCccc
Confidence 999998877899999999999999999999999999999999999999875543322 2223
Q ss_pred cccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHhccC
Q 040812 201 ESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKG 280 (300)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~ 280 (300)
.+||... +...+.++|+||||+++|+|++|..||...+. ........ .....++...+..+.++|.+||..
T Consensus 160 ~~Pe~~~---~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~----~~~~~~~~-~~~~~~~~~~~~~l~~~i~~~l~~- 230 (250)
T cd05123 160 LAPEVLL---GKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR----KEIYEKIL-KDPLRFPEFLSPEARDLISGLLQK- 230 (250)
T ss_pred cChHHhC---CCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH----HHHHHHHh-cCCCCCCCCCCHHHHHHHHHHhcC-
Confidence 4444332 34466789999999999999999999965433 12222222 245567777899999999999999
Q ss_pred CCCCCCCH---HHHhcCCCC
Q 040812 281 DPSKRWTA---SQLLSHPFL 297 (300)
Q Consensus 281 dp~~Rpt~---~~~l~hpw~ 297 (300)
||++||++ +++++||||
T Consensus 231 ~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 231 DPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred CHhhCCCcccHHHHHhCCCC
Confidence 99999999 999999998
No 309
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=3.6e-39 Score=276.48 Aligned_cols=230 Identities=24% Similarity=0.391 Sum_probs=181.3
Q ss_pred CCCcceeeeeecCCcceEEEEEEEcc-----CCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCC
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQ-----TLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSG 126 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 126 (300)
..++|++.+.||+|+||.||+|.+.. ++..||+|++...... ..+.+|+.++++++||||+++++++....
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~- 81 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGK- 81 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC-
Confidence 34679999999999999999999753 5789999998654321 23567999999999999999999987754
Q ss_pred cEEEEEeccCCCCHHHHHHhC----------------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCce
Q 040812 127 EVSILMEYMDAGSLEIYVKSR----------------------GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANV 184 (300)
Q Consensus 127 ~~~lv~e~~~~~~L~~~l~~~----------------------~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Ni 184 (300)
..|+||||+++++|.+++... ..+++..+..++.|++.||.|||++|++||||||+||
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~ni 161 (288)
T cd05050 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNC 161 (288)
T ss_pred ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhhe
Confidence 799999999999999999742 1367888999999999999999999999999999999
Q ss_pred eecCCCCCCcccee---------------------eccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCC
Q 040812 185 LINEKMEHPCGYSC---------------------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQ 242 (300)
Q Consensus 185 ll~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~ 242 (300)
+++.++...++.++ .|.+||.. .+..++.++|||||||++|||++ |..||.....
T Consensus 162 l~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~---~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~ 238 (288)
T cd05050 162 LVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESI---FYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH 238 (288)
T ss_pred EecCCCceEECccccceecccCccccccCCCccChhhcCHHHH---hcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 99887654332221 13334432 24557789999999999999998 8889865433
Q ss_pred CchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 243 EPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
. +....+........+...+..+.++|.+||+. ||++|||+.|+++
T Consensus 239 ~----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~-~p~~Rpt~~el~~ 284 (288)
T cd05050 239 E----EVIYYVRDGNVLSCPDNCPLELYNLMRLCWSK-LPSDRPSFASINR 284 (288)
T ss_pred H----HHHHHHhcCCCCCCCCCCCHHHHHHHHHHccc-CcccCCCHHHHHH
Confidence 2 22233333333445667789999999999999 9999999999874
No 310
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=8.5e-39 Score=273.66 Aligned_cols=234 Identities=26% Similarity=0.414 Sum_probs=178.0
Q ss_pred ceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC----CCHHHHHHHHhc---CCCceeEeceeeeCCCC----c
Q 040812 59 LEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP----PNPQELNILRQT---NSPYIVKCHQIFTKPSG----E 127 (300)
Q Consensus 59 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~E~~~l~~l---~h~niv~~~~~~~~~~~----~ 127 (300)
|++.+.||+|+||.||+|.++.+++.||+|.++...... ...+|+.+++++ +|+|++++++++..... .
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 678899999999999999999889999999997543322 234677777665 69999999999876541 2
Q ss_pred EEEEEeccCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce--------
Q 040812 128 VSILMEYMDAGSLEIYVKSRG--RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS-------- 197 (300)
Q Consensus 128 ~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~-------- 197 (300)
.+++|||+.+ +|.+++.... .+++..++.++.|++.||.|||+.+++|+||+|+||+++.++...++++
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~ 159 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSF 159 (287)
T ss_pred eEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccC
Confidence 8999999975 8988887643 5899999999999999999999999999999999999998865433322
Q ss_pred ----------eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCC---------
Q 040812 198 ----------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREP--------- 258 (300)
Q Consensus 198 ----------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~--------- 258 (300)
..|.+||... +..++.++|||||||++|+|+||.+||...........+.........
T Consensus 160 ~~~~~~~~~~~~~~~PE~~~---~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (287)
T cd07838 160 EMALTSVVVTLWYRAPEVLL---QSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSL 236 (287)
T ss_pred CcccccccccccccChHHhc---cCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCccc
Confidence 1234444432 455677999999999999999999999764433222222211100000
Q ss_pred -------------CCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 259 -------------PSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 259 -------------~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
.......++.+.++|.+||.. ||++||++.++++||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~-dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 237 PRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTF-NPHKRISAFEALQHPYF 287 (287)
T ss_pred chhhcccccccchhhhhhhhhHHHHHHHHHHhcc-CCccCCCHHHHhcCcCC
Confidence 000112357789999999999 99999999999999998
No 311
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=5.9e-39 Score=272.15 Aligned_cols=229 Identities=25% Similarity=0.361 Sum_probs=180.3
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCC---eEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEE
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTL---ALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVS 129 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~---~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 129 (300)
.++|++.+.||+|+||.||+|.+..++ ..+|+|.++..... ..+.+|+.++++++||||+++++++.... ..|
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~ 81 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSK-PVM 81 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC-ccE
Confidence 357899999999999999999986444 37999988653322 23467999999999999999999987654 899
Q ss_pred EEEeccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce-----------
Q 040812 130 ILMEYMDAGSLEIYVKSR-GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS----------- 197 (300)
Q Consensus 130 lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~----------- 197 (300)
+||||+++++|.+++... +.+++..+..++.|++.||.+||+.|++||||||+||+++.++...+.++
T Consensus 82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd05066 82 IVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 161 (267)
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccccccc
Confidence 999999999999999764 46899999999999999999999999999999999999987654322221
Q ss_pred -----------eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCC
Q 040812 198 -----------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265 (300)
Q Consensus 198 -----------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (300)
..|.+||.. .+..++.++|+|||||++||+++ |..||....... ....+........+...
T Consensus 162 ~~~~~~~~~~~~~y~~pe~~---~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~ 234 (267)
T cd05066 162 AAYTTRGGKIPIRWTAPEAI---AYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD----VIKAIEEGYRLPAPMDC 234 (267)
T ss_pred eeeecCCCccceeecCHhHh---ccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH----HHHHHhCCCcCCCCCCC
Confidence 123344433 24456789999999999999886 999996543321 22222223334445567
Q ss_pred ChHHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 266 SEKFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 266 ~~~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
++.+.+++.+||+. +|++||++.++++
T Consensus 235 ~~~~~~li~~~l~~-~p~~Rp~~~~i~~ 261 (267)
T cd05066 235 PAALHQLMLDCWQK-DRNERPKFEQIVS 261 (267)
T ss_pred CHHHHHHHHHHccc-CchhCCCHHHHHH
Confidence 88999999999999 9999999999875
No 312
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=9.7e-39 Score=270.87 Aligned_cols=229 Identities=25% Similarity=0.360 Sum_probs=181.5
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCe---EEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEE
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLA---LYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVS 129 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 129 (300)
.++|+..+.||+|+||.||+|....++. .+|+|.++..... ..+.+|+.++++++|+||+++++++.... ..|
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~ 82 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFK-PAM 82 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCC-CcE
Confidence 3578889999999999999999876554 7999988654322 23457999999999999999999987654 899
Q ss_pred EEEeccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcccee----------
Q 040812 130 ILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSC---------- 198 (300)
Q Consensus 130 lv~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~---------- 198 (300)
+||||+++++|.+++.. .+.+++..+..++.|++.||.|||+.|++|+||||+||+++.++...+..++
T Consensus 83 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 162 (268)
T cd05063 83 IITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPE 162 (268)
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceecccccc
Confidence 99999999999999975 3578999999999999999999999999999999999999877543222111
Q ss_pred ------------eccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCC
Q 040812 199 ------------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265 (300)
Q Consensus 199 ------------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (300)
.|.+||... +..++.++|||||||++|||+| |..||...... .....+........+...
T Consensus 163 ~~~~~~~~~~~~~y~~PE~~~---~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~----~~~~~i~~~~~~~~~~~~ 235 (268)
T cd05063 163 GTYTTSGGKIPIRWTAPEAIA---YRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH----EVMKAINDGFRLPAPMDC 235 (268)
T ss_pred cceeccCCCcCceecCHHHhh---cCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH----HHHHHHhcCCCCCCCCCC
Confidence 244454432 3456779999999999999998 99999654332 222223333344445567
Q ss_pred ChHHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 266 SEKFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 266 ~~~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
+..+.+++.+||+. +|++||++.++++
T Consensus 236 ~~~~~~li~~c~~~-~p~~Rp~~~~i~~ 262 (268)
T cd05063 236 PSAVYQLMLQCWQQ-DRARRPRFVDIVN 262 (268)
T ss_pred CHHHHHHHHHHcCC-CcccCcCHHHHHH
Confidence 89999999999999 9999999999975
No 313
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=8.1e-39 Score=273.12 Aligned_cols=229 Identities=22% Similarity=0.279 Sum_probs=177.3
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCe----EEEEEEeecCCCCC---CCHHHHHHHHhcCCCceeEeceeeeCCCCc
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLA----LYALKVMQCDRGTP---PNPQELNILRQTNSPYIVKCHQIFTKPSGE 127 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vaiK~~~~~~~~~---~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 127 (300)
..++|++.+.||+|+||.||+|.+..+++ .+++|.+....... .+..|+..+.++.||||+++++++.. ..
T Consensus 5 ~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~--~~ 82 (279)
T cd05111 5 KETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG--AS 82 (279)
T ss_pred CHhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC--Cc
Confidence 34678999999999999999999977666 46777764332221 22456778889999999999998753 36
Q ss_pred EEEEEeccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce---------
Q 040812 128 VSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS--------- 197 (300)
Q Consensus 128 ~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~--------- 197 (300)
.++++||+++|+|.+++.. .+.+++..+..++.||+.||.|||++|++||||||+||+++.++...+..+
T Consensus 83 ~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T cd05111 83 LQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPD 162 (279)
T ss_pred cEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCC
Confidence 7899999999999999976 446899999999999999999999999999999999999998765432221
Q ss_pred ------------eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCC
Q 040812 198 ------------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPEC 264 (300)
Q Consensus 198 ------------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (300)
..|.+||.. .++.++.++|||||||++|||+| |..||...... ........+..+..+..
T Consensus 163 ~~~~~~~~~~~~~~y~~pE~~---~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~ 235 (279)
T cd05111 163 DKKYFYSEHKTPIKWMALESI---LFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH----EVPDLLEKGERLAQPQI 235 (279)
T ss_pred CcccccCCCCCcccccCHHHh---ccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH----HHHHHHHCCCcCCCCCC
Confidence 123344433 24557789999999999999998 99999654321 11222233444455666
Q ss_pred CChHHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 265 SSEKFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 265 ~~~~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
++..+.+++.+||.. ||++|||+.++++
T Consensus 236 ~~~~~~~li~~c~~~-~p~~Rps~~el~~ 263 (279)
T cd05111 236 CTIDVYMVMVKCWMI-DENVRPTFKELAN 263 (279)
T ss_pred CCHHHHHHHHHHcCC-CcccCcCHHHHHH
Confidence 788999999999999 9999999999875
No 314
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=4.4e-39 Score=282.53 Aligned_cols=238 Identities=26% Similarity=0.360 Sum_probs=181.4
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC----CCCHHHHHHHHhcCCCceeEeceeeeCCC-----C
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT----PPNPQELNILRQTNSPYIVKCHQIFTKPS-----G 126 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~ 126 (300)
.++|.+.+.||+|+||.||+|.+..+++.||+|.+...... ..+.+|+.++++++|+||+++++++.... .
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 35799999999999999999999999999999998653322 23467999999999999999999876432 2
Q ss_pred cEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc----------
Q 040812 127 EVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY---------- 196 (300)
Q Consensus 127 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~---------- 196 (300)
..|+|+||+.. +|..++. ..+++..+..++.|++.||.|||+.|++||||||+||+++.++...+++
T Consensus 94 ~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~ 170 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIMG--HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAE 170 (342)
T ss_pred eEEEEeccccc-CHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCC
Confidence 46999999965 7776653 3689999999999999999999999999999999999999876543322
Q ss_pred ------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHH-----------------
Q 040812 197 ------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAI----------------- 253 (300)
Q Consensus 197 ------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~----------------- 253 (300)
+..|.+||.... +..++.++|||||||++|||++|+.||............+...
T Consensus 171 ~~~~~~~~~y~aPE~~~~--~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (342)
T cd07879 171 MTGYVVTRWYRAPEVILN--WMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAK 248 (342)
T ss_pred CCCceeeecccChhhhcC--ccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchH
Confidence 223455655431 2346779999999999999999999997543222111111100
Q ss_pred -hhCCCCCC--------CCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 254 -CFREPPSL--------PECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 254 -~~~~~~~~--------~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
.....+.. ....+..+.++|.+||+. ||++||++++++.||||++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~-dP~~R~~~~e~l~h~~f~~ 302 (342)
T cd07879 249 SYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLEL-DVDKRLTATEALEHPYFDS 302 (342)
T ss_pred HHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCC-ChhhCcCHHHHhcCcchhh
Confidence 00000000 123567899999999999 9999999999999999975
No 315
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=6.1e-39 Score=276.00 Aligned_cols=233 Identities=22% Similarity=0.299 Sum_probs=179.9
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCC----------------eEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeE
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTL----------------ALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVK 116 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~----------------~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~ 116 (300)
.++|++.+.||+|+||.||+|.+..++ ..||+|.+...... ..+.+|+.++++++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 467999999999999999999876533 56899998754322 23457999999999999999
Q ss_pred eceeeeCCCCcEEEEEeccCCCCHHHHHHhCC-----------CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcee
Q 040812 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRG-----------RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVL 185 (300)
Q Consensus 117 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----------~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nil 185 (300)
+++++..+ +..++||||+.+++|.+++.... .+++..++.++.|++.||.|||++|++|+||||+||+
T Consensus 84 ~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nil 162 (296)
T cd05051 84 LLGVCTVD-PPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCL 162 (296)
T ss_pred EEEEEecC-CCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhcee
Confidence 99998875 48999999999999999997654 6899999999999999999999999999999999999
Q ss_pred ecCCCCCCcccee---------------------eccccccccccCCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCC
Q 040812 186 INEKMEHPCGYSC---------------------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYM--GYYPFLEPGQ 242 (300)
Q Consensus 186 l~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt--g~~pf~~~~~ 242 (300)
++.++...++.++ .|.+||... ++.++.++|||||||++|||++ |..||.....
T Consensus 163 i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~ 239 (296)
T cd05051 163 VGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVL---LGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD 239 (296)
T ss_pred ecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhh---cCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh
Confidence 9887544322211 244555433 4457789999999999999998 7888865433
Q ss_pred CchHHHHHHHH---hhCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 243 EPDFLSLMLAI---CFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 243 ~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
........... ........+...+.++.+++.+||+. ||++|||+.++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~-~p~~Rpt~~el~~ 292 (296)
T cd05051 240 QQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRR-DEEDRPTFREIHL 292 (296)
T ss_pred HHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhcc-ChhcCCCHHHHHH
Confidence 22211111100 01111223445678999999999999 9999999999964
No 316
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=8.2e-39 Score=273.02 Aligned_cols=229 Identities=23% Similarity=0.293 Sum_probs=180.2
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCe----EEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCc
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLA----LYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGE 127 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 127 (300)
...+|++.+.||+|+||.||+|.+..+++ .||+|+++..... ..+.+|+.+++.++|+||+++++++... .
T Consensus 5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--~ 82 (279)
T cd05109 5 KETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS--T 82 (279)
T ss_pred chhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC--C
Confidence 45678999999999999999999876665 4899998654322 2335689999999999999999988653 5
Q ss_pred EEEEEeccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcccee--------
Q 040812 128 VSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSC-------- 198 (300)
Q Consensus 128 ~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~-------- 198 (300)
.++++||+++|+|.+++.. .+.+++..+..++.|++.||.|||++|++||||||+|||++.++...+.+++
T Consensus 83 ~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~ 162 (279)
T cd05109 83 VQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDID 162 (279)
T ss_pred cEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeecccc
Confidence 7899999999999999976 3468999999999999999999999999999999999999876554332221
Q ss_pred -------------eccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCC
Q 040812 199 -------------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPEC 264 (300)
Q Consensus 199 -------------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (300)
.|.+||.. .+..++.++|||||||++|||+| |..||...... .....+........+..
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~---~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~ 235 (279)
T cd05109 163 ETEYHADGGKVPIKWMALESI---LHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR----EIPDLLEKGERLPQPPI 235 (279)
T ss_pred cceeecCCCccchhhCCHHHh---ccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH----HHHHHHHCCCcCCCCcc
Confidence 23444443 24456789999999999999998 89999643321 12222223334445567
Q ss_pred CChHHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 265 SSEKFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 265 ~~~~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
.+.++.+++.+||.. ||++||++.++++
T Consensus 236 ~~~~~~~li~~~l~~-dp~~Rp~~~~l~~ 263 (279)
T cd05109 236 CTIDVYMIMVKCWMI-DSECRPRFRELVD 263 (279)
T ss_pred CCHHHHHHHHHHcCC-ChhhCcCHHHHHH
Confidence 889999999999999 9999999999984
No 317
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.4e-38 Score=268.86 Aligned_cols=227 Identities=23% Similarity=0.341 Sum_probs=178.8
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEec
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEY 134 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~ 134 (300)
.++|++.+.||+|+||.||+|.+..+. .+|+|.+...... ..+.+|+.++++++|+|++++++++.. +..++||||
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~-~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~v~e~ 81 (260)
T cd05069 5 RESLRLDVKLGQGCFGEVWMGTWNGTT-KVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSE--EPIYIVTEF 81 (260)
T ss_pred hHHeeeeeeecCcCCCeEEEEEEcCCc-eEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEcC--CCcEEEEEc
Confidence 356899999999999999999987654 5899987654322 234679999999999999999998753 368999999
Q ss_pred cCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcccee--------------
Q 040812 135 MDAGSLEIYVKSRG--RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSC-------------- 198 (300)
Q Consensus 135 ~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~-------------- 198 (300)
+.+++|.+++.... .+++..+..++.|++.||.|||+.|++|+||||+||++++++...+++++
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~ 161 (260)
T cd05069 82 MGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQ 161 (260)
T ss_pred CCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCcccccC
Confidence 99999999997532 47899999999999999999999999999999999999987654332211
Q ss_pred ------eccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHH
Q 040812 199 ------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRD 271 (300)
Q Consensus 199 ------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (300)
.|.+||.. .+...+.++|||||||++|||+| |..||...... ..............+...+..+.+
T Consensus 162 ~~~~~~~y~~Pe~~---~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 234 (260)
T cd05069 162 GAKFPIKWTAPEAA---LYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR----EVLEQVERGYRMPCPQGCPESLHE 234 (260)
T ss_pred CCccchhhCCHHHh---ccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHHHHcCCCCCCCcccCHHHHH
Confidence 13333332 23456779999999999999999 99999654322 222222233344556678899999
Q ss_pred HHHHHhccCCCCCCCCHHHHhc
Q 040812 272 FIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 272 li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
++.+||.. ||++||+++++++
T Consensus 235 li~~~l~~-~p~~Rp~~~~i~~ 255 (260)
T cd05069 235 LMKLCWKK-DPDERPTFEYIQS 255 (260)
T ss_pred HHHHHccC-CcccCcCHHHHHH
Confidence 99999999 9999999999874
No 318
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=9.7e-39 Score=269.42 Aligned_cols=220 Identities=22% Similarity=0.317 Sum_probs=175.0
Q ss_pred eecCCcceEEEEEEEc--cCCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEeccCCC
Q 040812 64 VLGQGNGGTVFKVRHK--QTLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAG 138 (300)
Q Consensus 64 ~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~~ 138 (300)
.||+|+||.||+|.+. +++..||+|++...... ..+.+|+.++++++|+||+++++++.. ...++||||++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~--~~~~lv~e~~~~~ 79 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA--EALMLVMEMASGG 79 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC--CCeEEEEEeCCCC
Confidence 4899999999999875 45667999998654322 224679999999999999999998754 3689999999999
Q ss_pred CHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce--------------------
Q 040812 139 SLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS-------------------- 197 (300)
Q Consensus 139 ~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~-------------------- 197 (300)
+|.+++.. ...+++..++.++.|++.||.|||++|++||||||+||+++.+....+..+
T Consensus 80 ~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 159 (257)
T cd05115 80 PLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGK 159 (257)
T ss_pred CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCC
Confidence 99999975 446899999999999999999999999999999999999987654322211
Q ss_pred --eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHH
Q 040812 198 --CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIR 274 (300)
Q Consensus 198 --~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 274 (300)
..|.+||... +..++.++|||||||++|||++ |..||...... .....+........+...++++.++|.
T Consensus 160 ~~~~y~aPE~~~---~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~ 232 (257)
T cd05115 160 WPLKWYAPECIN---FRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP----EVMSFIEQGKRLDCPAECPPEMYALMK 232 (257)
T ss_pred CCcccCCHHHHc---cCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH----HHHHHHHCCCCCCCCCCCCHHHHHHHH
Confidence 1244444432 3456779999999999999996 99999654322 233334445556677788999999999
Q ss_pred HHhccCCCCCCCCHHHHhc
Q 040812 275 CCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 275 ~~l~~~dp~~Rpt~~~~l~ 293 (300)
+||.. ||++||++.++.+
T Consensus 233 ~c~~~-~~~~Rp~~~~i~~ 250 (257)
T cd05115 233 DCWIY-KWEDRPNFAKVEE 250 (257)
T ss_pred HHcCC-ChhhCcCHHHHHH
Confidence 99999 9999999999875
No 319
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=4.1e-39 Score=282.77 Aligned_cols=239 Identities=27% Similarity=0.356 Sum_probs=183.3
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC----CCHHHHHHHHhcCCCceeEeceeeeCCC-----C
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP----PNPQELNILRQTNSPYIVKCHQIFTKPS-----G 126 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~ 126 (300)
.++|++.+.||+|+||.||++.+..+++.||+|.+....... ...+|+.++++++|+||+++++++..+. .
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFH 93 (343)
T ss_pred ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccc
Confidence 467999999999999999999999999999999986432221 2357999999999999999999886543 1
Q ss_pred cEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce---------
Q 040812 127 EVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS--------- 197 (300)
Q Consensus 127 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~--------- 197 (300)
..++||||+ +++|..++.. ..+++..++.++.||+.||.|||+.||+||||||+||+++.++...+.++
T Consensus 94 ~~~lv~e~~-~~~l~~~~~~-~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~ 171 (343)
T cd07880 94 DFYLVMPFM-GTDLGKLMKH-EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSE 171 (343)
T ss_pred eEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccccC
Confidence 368999999 6699888864 47899999999999999999999999999999999999998765433222
Q ss_pred -------eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHH-----------------
Q 040812 198 -------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAI----------------- 253 (300)
Q Consensus 198 -------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~----------------- 253 (300)
..|.+||.... ....+.++|+|||||++|+|++|..||............+...
T Consensus 172 ~~~~~~~~~y~aPE~~~~--~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (343)
T cd07880 172 MTGYVVTRWYRAPEVILN--WMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAK 249 (343)
T ss_pred ccccccCCcccCHHHHhC--CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHH
Confidence 22344444321 1246779999999999999999999997543321111111100
Q ss_pred --hhCCC-------CCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 254 --CFREP-------PSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 254 --~~~~~-------~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
....+ .......+..+.++|.+||.. ||++|||+.++++||||+.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~-dP~~R~t~~~~l~~~~~~~ 303 (343)
T cd07880 250 NYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVL-DAESRITAAEALAHPYFEE 303 (343)
T ss_pred HHHHhccccCcchHHHhccCCChHHHHHHHHHcCC-ChhhCCCHHHHhcCccHhh
Confidence 00000 011235677899999999999 9999999999999999964
No 320
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=7.2e-39 Score=272.16 Aligned_cols=227 Identities=19% Similarity=0.299 Sum_probs=173.7
Q ss_pred eeeeeecCCcceEEEEEEEccCCe--EEEEEEeecCCCC----CCCHHHHHHHHhcCCCceeEeceeeeCC-----CCcE
Q 040812 60 EKLQVLGQGNGGTVFKVRHKQTLA--LYALKVMQCDRGT----PPNPQELNILRQTNSPYIVKCHQIFTKP-----SGEV 128 (300)
Q Consensus 60 ~~~~~lg~G~~g~V~~~~~~~~~~--~vaiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~~ 128 (300)
.+.+.||+|+||.||+|.+..++. .+|+|.++..... ..+.+|+.+++.++|+||+++++++... ....
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 467889999999999999987765 6899988654322 2345689999999999999999875321 1247
Q ss_pred EEEEeccCCCCHHHHHHh------CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccceee---
Q 040812 129 SILMEYMDAGSLEIYVKS------RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCL--- 199 (300)
Q Consensus 129 ~lv~e~~~~~~L~~~l~~------~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~~--- 199 (300)
++||||+++|+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.++...+.+++.
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 161 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKK 161 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcccc
Confidence 899999999999988742 12478999999999999999999999999999999999998776543333222
Q ss_pred ------------------ccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCC
Q 040812 200 ------------------YESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPS 260 (300)
Q Consensus 200 ------------------~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 260 (300)
|.+||. ..+..++.++|||||||++|||++ |+.||..... . .....+.......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~pe~---~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-~---~~~~~~~~~~~~~ 234 (272)
T cd05075 162 IYNGDYYRQGRIAKMPVKWIAIES---LADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN-S---EIYDYLRQGNRLK 234 (272)
T ss_pred cCcccceecCCcccCCcccCCHHH---ccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH-H---HHHHHHHcCCCCC
Confidence 122222 224456779999999999999999 8999965332 1 2222233333444
Q ss_pred CCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcC
Q 040812 261 LPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 261 ~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~h 294 (300)
.+...++.+.++|.+||.. ||++|||+.+++++
T Consensus 235 ~~~~~~~~~~~li~~~l~~-~p~~Rps~~~l~~~ 267 (272)
T cd05075 235 QPPDCLDGLYSLMSSCWLL-NPKDRPSFETLRCE 267 (272)
T ss_pred CCCCCCHHHHHHHHHHcCC-CcccCcCHHHHHHH
Confidence 5667889999999999999 99999999999864
No 321
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=3.1e-39 Score=283.00 Aligned_cols=239 Identities=28% Similarity=0.394 Sum_probs=183.0
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCC----CCCCCHHHHHHHHhc-CCCceeEeceeeeCCC-CcEE
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDR----GTPPNPQELNILRQT-NSPYIVKCHQIFTKPS-GEVS 129 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~-~~~~ 129 (300)
.++|++.+.||+|+||.||+|.+..+++.+|+|.+.... ......+|+.+++++ +|+||+++++++.... ...|
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~ 85 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY 85 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence 467899999999999999999999889999999875422 122345699999999 9999999999876433 3589
Q ss_pred EEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce------------
Q 040812 130 ILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS------------ 197 (300)
Q Consensus 130 lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~------------ 197 (300)
+||||+.+ +|..++... .+++..++.++.||+.||.|||+.||+|+||||+||+++.++...++.+
T Consensus 86 lv~e~~~~-~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~ 163 (337)
T cd07852 86 LVFEYMET-DLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEEN 163 (337)
T ss_pred EEeccccc-CHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhcccccccc
Confidence 99999975 999988765 7889999999999999999999999999999999999998765433321
Q ss_pred ------------eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHH------------
Q 040812 198 ------------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAI------------ 253 (300)
Q Consensus 198 ------------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~------------ 253 (300)
..|.+||.... ....+.++|||||||++|+|+||+.||................
T Consensus 164 ~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (337)
T cd07852 164 PENPVLTDYVATRWYRAPEILLG--STRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIK 241 (337)
T ss_pred ccCcchhcccccccccCceeeec--cccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHH
Confidence 12445554321 2345678999999999999999999996543221111111000
Q ss_pred -----------hhCC---CCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 254 -----------CFRE---PPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 254 -----------~~~~---~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
.... ........+.++.++|.+||+. ||++|||+.++++||||++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~-~P~~Rps~~~il~~~~~~~ 300 (337)
T cd07852 242 SPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVF-NPNKRLTAEEALEHPYVAQ 300 (337)
T ss_pred hhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccC-CcccccCHHHHhhChhhhh
Confidence 0000 0111123678899999999999 9999999999999999964
No 322
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=6e-39 Score=281.94 Aligned_cols=240 Identities=25% Similarity=0.324 Sum_probs=182.7
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC----CCCHHHHHHHHhcCCCceeEeceeeeCCC-----
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT----PPNPQELNILRQTNSPYIVKCHQIFTKPS----- 125 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~----- 125 (300)
..++|++.+.||+|+||.||+|.+..+++.||+|.+...... ....+|+.++++++|+||+++++++....
T Consensus 15 ~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (345)
T cd07877 15 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 94 (345)
T ss_pred ccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccccc
Confidence 457899999999999999999999999999999998653221 22356999999999999999999875422
Q ss_pred CcEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce--------
Q 040812 126 GEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS-------- 197 (300)
Q Consensus 126 ~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~-------- 197 (300)
...|++++++ +++|.+++... .+++..++.++.|++.||.|||+.|++||||||+||+++.++...+.++
T Consensus 95 ~~~~lv~~~~-~~~L~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~ 172 (345)
T cd07877 95 NDVYLVTHLM-GADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 172 (345)
T ss_pred ccEEEEehhc-ccCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecccccccccc
Confidence 2478899887 67998887654 6899999999999999999999999999999999999998765543322
Q ss_pred --------eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHH----------------
Q 040812 198 --------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAI---------------- 253 (300)
Q Consensus 198 --------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~---------------- 253 (300)
..|.+||.... ...++.++|||||||++|+|++|+.||...........+....
T Consensus 173 ~~~~~~~~~~y~aPE~~~~--~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (345)
T cd07877 173 EMTGYVATRWYRAPEIMLN--WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 250 (345)
T ss_pred cccccccCCCccCHHHHhC--ccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhH
Confidence 23455554321 1346679999999999999999999996543322111111100
Q ss_pred -------hhCCCC---CCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 254 -------CFREPP---SLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 254 -------~~~~~~---~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
...... ......++++.++|.+||.. ||.+||++.+++.||||.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~-dp~~R~t~~e~l~h~~f~~ 305 (345)
T cd07877 251 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVL-DSDKRITAAQALAHAYFAQ 305 (345)
T ss_pred HHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCC-ChhhcCCHHHHhcChhhhh
Confidence 000000 11123577899999999999 9999999999999999974
No 323
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=3.3e-39 Score=275.52 Aligned_cols=234 Identities=31% Similarity=0.467 Sum_probs=181.6
Q ss_pred ceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC----CCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEec
Q 040812 59 LEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP----PNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEY 134 (300)
Q Consensus 59 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~ 134 (300)
|+..+.||+|+||.||+|+...+++.||+|.+....... .+.+|+.++++++|+|++++++++... +..++||||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~~v~e~ 79 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTE-RKLYLVFEY 79 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcC-CceEEEecC
Confidence 567789999999999999999999999999987653222 235699999999999999999998875 489999999
Q ss_pred cCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce----------------
Q 040812 135 MDAGSLEIYVKSR-GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS---------------- 197 (300)
Q Consensus 135 ~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~---------------- 197 (300)
+++ +|.+++... ..+++..+..++.|++.||.|||+.|++|+||+|+||+++.++...+.++
T Consensus 80 ~~~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~ 158 (282)
T cd07829 80 CDM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHE 158 (282)
T ss_pred cCc-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCcc
Confidence 985 999999875 57999999999999999999999999999999999999998655433221
Q ss_pred ---eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHh----------------hCCC
Q 040812 198 ---CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAIC----------------FREP 258 (300)
Q Consensus 198 ---~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~----------------~~~~ 258 (300)
..|.+||.... ....+.++|||||||++|||++|..||...........+..... ....
T Consensus 159 ~~~~~~~aPE~~~~--~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (282)
T cd07829 159 VVTLWYRAPEILLG--SKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTF 236 (282)
T ss_pred ccCcCcCChHHhcC--CcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccc
Confidence 12444554321 22567799999999999999999999966443222211111000 0000
Q ss_pred C--------CCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 259 P--------SLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 259 ~--------~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
+ ......+..+.++|.+||.. ||++||+++++++||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~-~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 237 PKFPPKDLEKVLPRLDPEGIDLLSKMLQY-NPAKRISAKEALKHPYF 282 (282)
T ss_pred cccCccchHHhcccccHHHHHHHHHhhcc-CcccCCCHHHHhhCcCC
Confidence 0 00112367899999999999 99999999999999998
No 324
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=7.9e-39 Score=274.65 Aligned_cols=227 Identities=23% Similarity=0.357 Sum_probs=178.2
Q ss_pred cceeeeeecCCcceEEEEEEEcc-----CCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEE
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQ-----TLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVS 129 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 129 (300)
+|++.+.||+|+||.||+|.+.. ....+|+|.+...... ..+.+|+.+++.++||||+++++.+.... ..+
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 79 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDG-PLL 79 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCC-CcE
Confidence 47889999999999999998753 2357899988654322 23467999999999999999999987654 799
Q ss_pred EEEeccCCCCHHHHHHhC------------------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcee
Q 040812 130 ILMEYMDAGSLEIYVKSR------------------------GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVL 185 (300)
Q Consensus 130 lv~e~~~~~~L~~~l~~~------------------------~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nil 185 (300)
+||||+.+++|.+++... ..+++..+..++.|++.||.|||+.|++||||||+||+
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nil 159 (290)
T cd05045 80 LIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVL 159 (290)
T ss_pred EEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEE
Confidence 999999999999998642 24788899999999999999999999999999999999
Q ss_pred ecCCCCCCcccee---------------------eccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCC
Q 040812 186 INEKMEHPCGYSC---------------------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQE 243 (300)
Q Consensus 186 l~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~ 243 (300)
+++++...+.+++ .|.+||.. .+..++.++|||||||++|||+| |..||.....
T Consensus 160 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~---~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~- 235 (290)
T cd05045 160 VAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESL---FDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP- 235 (290)
T ss_pred EcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHH---ccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH-
Confidence 9987654333222 23334332 24456779999999999999999 9999964332
Q ss_pred chHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 244 PDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
.. .............+...+.++.+++.+||.. ||++||++.++++
T Consensus 236 ~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~-~P~~Rp~~~~i~~ 281 (290)
T cd05045 236 ER---LFNLLKTGYRMERPENCSEEMYNLMLTCWKQ-EPDKRPTFADISK 281 (290)
T ss_pred HH---HHHHHhCCCCCCCCCCCCHHHHHHHHHHccC-CcccCCCHHHHHH
Confidence 22 2222223334455677889999999999999 9999999999875
No 325
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-39 Score=258.03 Aligned_cols=237 Identities=32% Similarity=0.583 Sum_probs=189.7
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCC---HHHHHHHHhc-CCCceeEeceeeeCCCCcEEEE
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN---PQELNILRQT-NSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~---~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~lv 131 (300)
+++.+.+..||+|+.|.||+++.+.+|...|||.+......... +..+.++.+- ..|.||+.+|+|..+. .+++.
T Consensus 91 indl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~-dV~Ic 169 (391)
T KOG0983|consen 91 INDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNT-DVFIC 169 (391)
T ss_pred hHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCc-hHHHH
Confidence 45567788899999999999999999999999998765433222 2233333332 3699999999999865 78999
Q ss_pred EeccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCceeecCCCCCCc---------------
Q 040812 132 MEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHS-RNIVHRDIKPANVLINEKMEHPC--------------- 194 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~-~~i~H~Dlkp~Nill~~~~~~~~--------------- 194 (300)
||.|.. .+..+++. .+++++..+-.+...++.||.||-+ +||+|||+||+|||+|+.+..++
T Consensus 170 MelMs~-C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAh 248 (391)
T KOG0983|consen 170 MELMST-CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAH 248 (391)
T ss_pred HHHHHH-HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeeccccc
Confidence 999954 66666654 5579999999999999999999975 68999999999999999877532
Q ss_pred ---cceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCC--CChHH
Q 040812 195 ---GYSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPEC--SSEKF 269 (300)
Q Consensus 195 ---~~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l 269 (300)
.+...|++||-..-.....|...+||||||++++||.||+.||...+.+- +.+..+....++.++.. .++.+
T Consensus 249 trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdF---e~ltkvln~ePP~L~~~~gFSp~F 325 (391)
T KOG0983|consen 249 TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDF---EVLTKVLNEEPPLLPGHMGFSPDF 325 (391)
T ss_pred ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccH---HHHHHHHhcCCCCCCcccCcCHHH
Confidence 23445777776655555667889999999999999999999998766553 34444555677777653 69999
Q ss_pred HHHHHHHhccCCCCCCCCHHHHhcCCCCC
Q 040812 270 RDFIRCCLQKGDPSKRWTASQLLSHPFLA 298 (300)
Q Consensus 270 ~~li~~~l~~~dp~~Rpt~~~~l~hpw~~ 298 (300)
.+|+..||++ |+.+||...++|+|||+.
T Consensus 326 ~~fv~~CL~k-d~r~RP~Y~~Ll~h~Fi~ 353 (391)
T KOG0983|consen 326 QSFVKDCLTK-DHRKRPKYNKLLEHPFIK 353 (391)
T ss_pred HHHHHHHhhc-CcccCcchHHHhcCccee
Confidence 9999999999 999999999999999985
No 326
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=4.7e-39 Score=273.28 Aligned_cols=222 Identities=23% Similarity=0.326 Sum_probs=174.6
Q ss_pred eeecCCcceEEEEEEEccCCe--EEEEEEeecCCCC---CCCHHHHHHHHhc-CCCceeEeceeeeCCCCcEEEEEeccC
Q 040812 63 QVLGQGNGGTVFKVRHKQTLA--LYALKVMQCDRGT---PPNPQELNILRQT-NSPYIVKCHQIFTKPSGEVSILMEYMD 136 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~~~--~vaiK~~~~~~~~---~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~lv~e~~~ 136 (300)
+.||+|+||.||+|.+..++. .+++|.++..... ..+.+|+.++.++ +||||+++++++.... ..|+||||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-~~~lv~e~~~ 79 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG-YLYLAIEYAP 79 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCC-CceEEEEeCC
Confidence 358999999999999987775 4688887643221 2345799999999 7999999999987754 8999999999
Q ss_pred CCCHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcccee--
Q 040812 137 AGSLEIYVKSRG----------------RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSC-- 198 (300)
Q Consensus 137 ~~~L~~~l~~~~----------------~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~-- 198 (300)
+++|.+++.... .+++..++.++.|++.||+|||+.|++||||||+||+++.++...+++++
T Consensus 80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~ 159 (270)
T cd05047 80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 159 (270)
T ss_pred CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCc
Confidence 999999997532 37889999999999999999999999999999999999887654333222
Q ss_pred ----------------eccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCC
Q 040812 199 ----------------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSL 261 (300)
Q Consensus 199 ----------------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 261 (300)
.|.+||... +..++.++|||||||++|||+| |..||...... ..............
T Consensus 160 ~~~~~~~~~~~~~~~~~y~apE~~~---~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~----~~~~~~~~~~~~~~ 232 (270)
T cd05047 160 RGQEVYVKKTMGRLPVRWMAIESLN---YSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA----ELYEKLPQGYRLEK 232 (270)
T ss_pred cccchhhhccCCCCccccCChHHHc---cCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH----HHHHHHhCCCCCCC
Confidence 244454432 4456789999999999999997 99999653322 22222333344455
Q ss_pred CCCCChHHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 262 PECSSEKFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 262 ~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
+...+.++.+++.+||.. ||.+|||+.++++
T Consensus 233 ~~~~~~~~~~li~~~l~~-~p~~Rps~~~il~ 263 (270)
T cd05047 233 PLNCDDEVYDLMRQCWRE-KPYERPSFAQILV 263 (270)
T ss_pred CCcCCHHHHHHHHHHccc-ChhhCCCHHHHHH
Confidence 666788999999999999 9999999999985
No 327
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=2.2e-38 Score=266.79 Aligned_cols=229 Identities=23% Similarity=0.376 Sum_probs=182.3
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEec
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEY 134 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~ 134 (300)
.++|++.+.||+|+||.||++.+.. +..+|+|.+...... ..+.+|+.++++++|||++++++++.... ..++||||
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~~-~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~~v~e~ 80 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWLE-KRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERS-PICLVFEF 80 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEeC-CCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCC-ceEEEEEc
Confidence 3578999999999999999998864 668999988654322 34577999999999999999999987654 89999999
Q ss_pred cCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce----------------
Q 040812 135 MDAGSLEIYVKSR-GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS---------------- 197 (300)
Q Consensus 135 ~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~---------------- 197 (300)
+++++|.+++... +.+++..++.++.|++.||.+||+.|++|+||||+||+++.++...+.++
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~ 160 (256)
T cd05112 81 MEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTG 160 (256)
T ss_pred CCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCcccccCC
Confidence 9999999999753 46899999999999999999999999999999999999987654322221
Q ss_pred ----eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHH
Q 040812 198 ----CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDF 272 (300)
Q Consensus 198 ----~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 272 (300)
..|.+||... ++.++.++|||||||++|||++ |..||...... ..............+...++.+.++
T Consensus 161 ~~~~~~~~aPe~~~---~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l 233 (256)
T cd05112 161 TKFPVKWSSPEVFS---FSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS----EVVETINAGFRLYKPRLASQSVYEL 233 (256)
T ss_pred CccchhhcCHhHhc---cCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH----HHHHHHhCCCCCCCCCCCCHHHHHH
Confidence 1244444332 4567789999999999999998 99999643321 2222222233444456678999999
Q ss_pred HHHHhccCCCCCCCCHHHHhcC
Q 040812 273 IRCCLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 273 i~~~l~~~dp~~Rpt~~~~l~h 294 (300)
+.+||.. +|++|||+.+++++
T Consensus 234 ~~~~l~~-~p~~Rp~~~~~l~~ 254 (256)
T cd05112 234 MQHCWKE-RPEDRPSFSLLLHQ 254 (256)
T ss_pred HHHHccc-ChhhCCCHHHHHHh
Confidence 9999999 99999999999864
No 328
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.4e-38 Score=272.28 Aligned_cols=233 Identities=26% Similarity=0.366 Sum_probs=177.9
Q ss_pred CcceeeeeecCCcceEEEEEEE----ccCCeEEEEEEeecCCCC--CCCHHHHHHHHhcCCCceeEeceeeeCC-CCcEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRH----KQTLALYALKVMQCDRGT--PPNPQELNILRQTNSPYIVKCHQIFTKP-SGEVS 129 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~----~~~~~~vaiK~~~~~~~~--~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~~ 129 (300)
.+|++.+.||+|+||.||++.. ..+++.||+|.+...... ..+.+|+.++++++||||+++++++... ....+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 4689999999999999999984 457889999998654321 2346799999999999999999976432 33689
Q ss_pred EEEeccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcccee----------
Q 040812 130 ILMEYMDAGSLEIYVKSR-GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSC---------- 198 (300)
Q Consensus 130 lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~---------- 198 (300)
+||||+++++|.+++... ..+++..+..++.|++.||.|||++|++||||||+||+++.++...++.++
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~ 163 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKE 163 (284)
T ss_pred EEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccCCCc
Confidence 999999999999999764 468999999999999999999999999999999999999876544322211
Q ss_pred ------------eccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCc------------hHHHHHHHHh
Q 040812 199 ------------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEP------------DFLSLMLAIC 254 (300)
Q Consensus 199 ------------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~------------~~~~~~~~~~ 254 (300)
.|.+||.. .+..++.++|||||||++|||++|..|+....... ..........
T Consensus 164 ~~~~~~~~~~~~~y~aPE~~---~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (284)
T cd05081 164 YYKVREPGESPIFWYAPESL---TESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLK 240 (284)
T ss_pred ceeecCCCCCceEeeCHHHh---ccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHh
Confidence 23444433 24557789999999999999999877764322110 0001111112
Q ss_pred hCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 255 FREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 255 ~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
.......+...+..+.+++.+||.. +|++|||+.++++
T Consensus 241 ~~~~~~~~~~~~~~~~~li~~cl~~-~p~~Rpt~~ei~~ 278 (284)
T cd05081 241 NNGRLPAPPGCPAEIYAIMKECWNN-DPSQRPSFSELAL 278 (284)
T ss_pred cCCcCCCCCCCCHHHHHHHHHHccC-ChhhCCCHHHHHH
Confidence 2223344566788999999999999 9999999999975
No 329
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=9.3e-39 Score=268.96 Aligned_cols=227 Identities=22% Similarity=0.354 Sum_probs=182.3
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEec
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEY 134 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~ 134 (300)
..++|++.+.||+|+||.||++.. +++.||+|.++.+.....+.+|+.++++++|+|++++++++... ..++||||
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--~~~~v~e~ 79 (254)
T cd05083 4 NLQKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILHN--GLYIVMEL 79 (254)
T ss_pred cHHHceeeeeeccCCCCceEeccc--CCCceEEEeecCcchHHHHHHHHHHHHhCCCCCcCeEEEEEcCC--CcEEEEEC
Confidence 456799999999999999999875 57789999987654444567899999999999999999988653 47999999
Q ss_pred cCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce---------------
Q 040812 135 MDAGSLEIYVKSRG--RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS--------------- 197 (300)
Q Consensus 135 ~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~--------------- 197 (300)
+.+++|.+++.... .+++..+..++.|++.||.|||+.|++||||||+||+++.++...+.++
T Consensus 80 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 159 (254)
T cd05083 80 MSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKL 159 (254)
T ss_pred CCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceeccccCCCCCC
Confidence 99999999997643 5889999999999999999999999999999999999988765433222
Q ss_pred -eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHH
Q 040812 198 -CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRC 275 (300)
Q Consensus 198 -~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 275 (300)
..|.+||.. .++.++.++|||||||++|||++ |..||...... ..............+...++.+.+++.+
T Consensus 160 ~~~y~~pe~~---~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~li~~ 232 (254)
T cd05083 160 PVKWTAPEAL---KHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK----EVKECVEKGYRMEPPEGCPADVYVLMTS 232 (254)
T ss_pred CceecCHHHh---ccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH----HHHHHHhCCCCCCCCCcCCHHHHHHHHH
Confidence 124444433 24567789999999999999998 99999654322 2222223333444556778999999999
Q ss_pred HhccCCCCCCCCHHHHhc
Q 040812 276 CLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 276 ~l~~~dp~~Rpt~~~~l~ 293 (300)
||.. +|++||++.++++
T Consensus 233 ~l~~-~p~~Rp~~~~l~~ 249 (254)
T cd05083 233 CWET-EPKKRPSFHKLRE 249 (254)
T ss_pred HcCC-ChhhCcCHHHHHH
Confidence 9999 9999999999875
No 330
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-39 Score=303.55 Aligned_cols=229 Identities=24% Similarity=0.376 Sum_probs=192.4
Q ss_pred CCcceeeeeecCCcceEEEEEEEccC-C----eEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCc
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQT-L----ALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGE 127 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~-~----~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 127 (300)
..+.++.+.||+|.||.||.|....- + ..||+|.++..... ..|.+|..+|++++|||||+++|++.+ .+.
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~-~~~ 769 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD-SGP 769 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC-CCC
Confidence 55678899999999999999997642 2 34899988765433 356789999999999999999999987 458
Q ss_pred EEEEEeccCCCCHHHHHHhC-------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcccee--
Q 040812 128 VSILMEYMDAGSLEIYVKSR-------GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSC-- 198 (300)
Q Consensus 128 ~~lv~e~~~~~~L~~~l~~~-------~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~-- 198 (300)
.+|++|||+||+|..++++. ..++..+...++.||+.|+.||++++++||||..+|+|++.....++++++
T Consensus 770 ~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlA 849 (1025)
T KOG1095|consen 770 PLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLA 849 (1025)
T ss_pred cEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchh
Confidence 99999999999999999875 248999999999999999999999999999999999999988666555433
Q ss_pred -------------------eccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCC
Q 040812 199 -------------------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREP 258 (300)
Q Consensus 199 -------------------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 258 (300)
.|++||+.. .+.++.|+|||||||++||++| |..||.+..+. +++..+..+..
T Consensus 850 rDiy~~~yyr~~~~a~lPvkWm~PEsl~---d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~----~v~~~~~~ggR 922 (1025)
T KOG1095|consen 850 RDIYDKDYYRKHGEAMLPVKWMPPESLK---DGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNF----EVLLDVLEGGR 922 (1025)
T ss_pred HhhhhchheeccCccccceecCCHHHHh---hcccccccchhhhHHHHHHHHhCCCCCCCCcchH----HHHHHHHhCCc
Confidence 366777765 3567789999999999999998 89999765443 34443444557
Q ss_pred CCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 259 PSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 259 ~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
...|..+++.+.++|.+||+. +|++||++..+++
T Consensus 923 L~~P~~CP~~ly~lM~~CW~~-~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 923 LDPPSYCPEKLYQLMLQCWKH-DPEDRPSFRTIVE 956 (1025)
T ss_pred cCCCCCCChHHHHHHHHHccC-ChhhCccHHHHHh
Confidence 888999999999999999999 9999999999885
No 331
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.1e-38 Score=272.99 Aligned_cols=233 Identities=27% Similarity=0.371 Sum_probs=178.8
Q ss_pred cceeeeeecCCcceEEEEEEE----ccCCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCC-CCcEE
Q 040812 58 QLEKLQVLGQGNGGTVFKVRH----KQTLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKP-SGEVS 129 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~----~~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~~ 129 (300)
.|++++.||+|+||.||+++. ..+++.||+|.++..... ..+.+|+.++++++|+||+++++++... ....+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 478999999999999999984 456889999998644322 2346799999999999999999988765 23689
Q ss_pred EEEeccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce-----------
Q 040812 130 ILMEYMDAGSLEIYVKSR-GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS----------- 197 (300)
Q Consensus 130 lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~----------- 197 (300)
+||||+++++|.+++... ..+++..+..++.||+.||.|||++|++||||||+||+++.++...+..+
T Consensus 85 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~ 164 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE 164 (284)
T ss_pred EEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccCcc
Confidence 999999999999999764 35899999999999999999999999999999999999987755332221
Q ss_pred -----------eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-----------CchHHHHHHHHhh
Q 040812 198 -----------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQ-----------EPDFLSLMLAICF 255 (300)
Q Consensus 198 -----------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~-----------~~~~~~~~~~~~~ 255 (300)
..|.+||... +..++.++|||||||++|||+|+..|+..... .............
T Consensus 165 ~~~~~~~~~~~~~y~apE~~~---~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (284)
T cd05079 165 YYTVKDDLDSPVFWYAPECLI---QSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEE 241 (284)
T ss_pred ceeecCCCCCCccccCHHHhc---cCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHc
Confidence 1234444332 44567799999999999999998776532211 0111111222222
Q ss_pred CCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcC
Q 040812 256 REPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 256 ~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~h 294 (300)
......+...+..+.+|+.+||+. ||++|||+.+++++
T Consensus 242 ~~~~~~~~~~~~~~~~li~~~l~~-~p~~Rpt~~~il~~ 279 (284)
T cd05079 242 GKRLPRPPNCPEEVYQLMRKCWEF-QPSKRTTFQNLIEG 279 (284)
T ss_pred CccCCCCCCCCHHHHHHHHHHccC-CcccCcCHHHHHHH
Confidence 333445667889999999999999 99999999999864
No 332
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.8e-38 Score=275.47 Aligned_cols=231 Identities=23% Similarity=0.335 Sum_probs=181.2
Q ss_pred CCCCcceeeeeecCCcceEEEEEEEcc-------CCeEEEEEEeecCCCCC---CCHHHHHHHHhc-CCCceeEeceeee
Q 040812 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQ-------TLALYALKVMQCDRGTP---PNPQELNILRQT-NSPYIVKCHQIFT 122 (300)
Q Consensus 54 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-------~~~~vaiK~~~~~~~~~---~~~~E~~~l~~l-~h~niv~~~~~~~ 122 (300)
...++|.+.+.||+|+||.||+|++.. ....+|+|.++...... .+.+|+.+++++ +||||+++++++.
T Consensus 9 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 88 (314)
T cd05099 9 FPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCT 88 (314)
T ss_pred ccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEc
Confidence 345789999999999999999998642 34579999987543221 245799999999 6999999999987
Q ss_pred CCCCcEEEEEeccCCCCHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceee
Q 040812 123 KPSGEVSILMEYMDAGSLEIYVKSR----------------GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLI 186 (300)
Q Consensus 123 ~~~~~~~lv~e~~~~~~L~~~l~~~----------------~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill 186 (300)
.. +..|+||||+.+|+|.+++... ..+++..+..++.||+.||.|||++|++||||||+|||+
T Consensus 89 ~~-~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill 167 (314)
T cd05099 89 QE-GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLV 167 (314)
T ss_pred cC-CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEE
Confidence 65 4899999999999999999753 247889999999999999999999999999999999999
Q ss_pred cCCCCCCccce---------------------eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCc
Q 040812 187 NEKMEHPCGYS---------------------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEP 244 (300)
Q Consensus 187 ~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~ 244 (300)
+.++...++.+ ..|.+||... +..++.++|||||||++|+|++ |..||..... .
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~-~ 243 (314)
T cd05099 168 TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALF---DRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV-E 243 (314)
T ss_pred cCCCcEEEccccccccccccccccccccCCCCccccCHHHHc---cCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH-H
Confidence 87765432221 1245555443 4556789999999999999999 8999954322 1
Q ss_pred hHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 245 DFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
..............+...+.++.+++.+||.. ||++|||+.++++
T Consensus 244 ---~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~-~p~~Rps~~~ll~ 288 (314)
T cd05099 244 ---ELFKLLREGHRMDKPSNCTHELYMLMRECWHA-VPTQRPTFKQLVE 288 (314)
T ss_pred ---HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCC-CcccCcCHHHHHH
Confidence 22222333444455677888999999999999 9999999999875
No 333
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.7e-38 Score=267.86 Aligned_cols=223 Identities=25% Similarity=0.406 Sum_probs=182.3
Q ss_pred eeecCCcceEEEEEEEccC---CeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEeccC
Q 040812 63 QVLGQGNGGTVFKVRHKQT---LALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMD 136 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~ 136 (300)
+.||+|+||.||+|.+... +..||+|.++..... ....+|+..++.++|+||+++++++... +..++||||++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~lv~e~~~ 79 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEE-EPLYLVLEYME 79 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCC-CceEEEEEecc
Confidence 4699999999999999866 889999999765543 2345799999999999999999998874 48999999999
Q ss_pred CCCHHHHHHhC---------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce----------
Q 040812 137 AGSLEIYVKSR---------GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS---------- 197 (300)
Q Consensus 137 ~~~L~~~l~~~---------~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~---------- 197 (300)
+++|.+++... ..+++..++.++.|++.||.|||++|++|+||||+||+++.++...++++
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~ 159 (262)
T cd00192 80 GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDD 159 (262)
T ss_pred CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEccccccccccccc
Confidence 99999999875 67999999999999999999999999999999999999998755433221
Q ss_pred -----------eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCC
Q 040812 198 -----------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265 (300)
Q Consensus 198 -----------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (300)
..|.+||... +..++.++|||||||++|+|++ |..||..... ...............+..+
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~ 232 (262)
T cd00192 160 YYRKKTGGKLPIRWMAPESLK---DGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN----EEVLEYLRKGYRLPKPEYC 232 (262)
T ss_pred ccccccCCCcCccccCHHHhc---cCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH----HHHHHHHHcCCCCCCCccC
Confidence 2244444432 3356789999999999999999 6999966522 1223333334555667778
Q ss_pred ChHHHHHHHHHhccCCCCCCCCHHHHhcC
Q 040812 266 SEKFRDFIRCCLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 266 ~~~l~~li~~~l~~~dp~~Rpt~~~~l~h 294 (300)
+.++.+++.+||.. ||++|||+++++++
T Consensus 233 ~~~~~~li~~~l~~-~p~~Rps~~~l~~~ 260 (262)
T cd00192 233 PDELYELMLSCWQL-DPEDRPTFSELVER 260 (262)
T ss_pred ChHHHHHHHHHccC-CcccCcCHHHHHHh
Confidence 99999999999999 99999999999875
No 334
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=3.9e-39 Score=282.94 Aligned_cols=240 Identities=28% Similarity=0.366 Sum_probs=183.5
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC----CCCHHHHHHHHhcCCCceeEeceeeeCCCC----
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT----PPNPQELNILRQTNSPYIVKCHQIFTKPSG---- 126 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---- 126 (300)
..++|++.+.||+|+||.||+|++..+++.||+|.+...... ....+|+.++++++|+|++++++++.....
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 356799999999999999999999999999999998643221 223569999999999999999988765431
Q ss_pred -cEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc---------
Q 040812 127 -EVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY--------- 196 (300)
Q Consensus 127 -~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~--------- 196 (300)
..++|+||+ +++|.+++.. ..+++..++.++.|++.||.|||+.|++||||||+||+++.++...+.+
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~ 170 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDD 170 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEccccccccccc
Confidence 389999999 5699998875 4699999999999999999999999999999999999999876543322
Q ss_pred -------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHh---------------
Q 040812 197 -------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAIC--------------- 254 (300)
Q Consensus 197 -------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~--------------- 254 (300)
+..|.+||.... ...++.++|||||||++|+|+||+.||...........+.....
T Consensus 171 ~~~~~~~~~~y~aPE~~~~--~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 248 (343)
T cd07851 171 EMTGYVATRWYRAPEIMLN--WMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESA 248 (343)
T ss_pred cccCCcccccccCHHHHhC--CCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhH
Confidence 223455554321 12467799999999999999999999965433211111111000
Q ss_pred --------hCCCC---CCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 255 --------FREPP---SLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 255 --------~~~~~---~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
..... ......++.+.++|.+||.. ||++|||+.++++||||.+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~-~P~~Rpt~~ell~h~~~~~ 303 (343)
T cd07851 249 RNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVL-DPDKRITAAEALAHPYLAE 303 (343)
T ss_pred HHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCC-ChhhCCCHHHHhcCCCccc
Confidence 00000 01123578899999999999 9999999999999999975
No 335
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1.1e-38 Score=301.08 Aligned_cols=228 Identities=21% Similarity=0.261 Sum_probs=176.8
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEE
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSI 130 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~l 130 (300)
+++|++.+.||+|+||.||+|.+..+++.||+|++..+... ..+.+|+.++++++||||+++++++.+.. ..|+
T Consensus 1 igrYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~-~lyL 79 (932)
T PRK13184 1 MQRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGD-PVYY 79 (932)
T ss_pred CCCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCC-EEEE
Confidence 36899999999999999999999999999999998754322 23467999999999999999999987754 8999
Q ss_pred EEeccCCCCHHHHHHhC-----------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcc----
Q 040812 131 LMEYMDAGSLEIYVKSR-----------GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG---- 195 (300)
Q Consensus 131 v~e~~~~~~L~~~l~~~-----------~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~---- 195 (300)
||||++|++|.+++... ..++...+..++.||+.||.|||++||+||||||+||+++.++...+.
T Consensus 80 VMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGL 159 (932)
T PRK13184 80 TMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGA 159 (932)
T ss_pred EEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCc
Confidence 99999999999988641 235667788999999999999999999999999999999876543221
Q ss_pred ---------------------------------ceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Q 040812 196 ---------------------------------YSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQ 242 (300)
Q Consensus 196 ---------------------------------~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~ 242 (300)
++..|.+||.. .+..++.++|||||||++|||+||+.||.....
T Consensus 160 Ak~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l---~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~ 236 (932)
T PRK13184 160 AIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERL---LGVPASESTDIYALGVILYQMLTLSFPYRRKKG 236 (932)
T ss_pred ceecccccccccccccccccccccccccCCCCCCCCCCCCHHHh---cCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcch
Confidence 22334555543 255678899999999999999999999965332
Q ss_pred CchHHHHHHHHhhCCCCC--CCCCCChHHHHHHHHHhccCCCCCCCCHHHHh
Q 040812 243 EPDFLSLMLAICFREPPS--LPECSSEKFRDFIRCCLQKGDPSKRWTASQLL 292 (300)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l 292 (300)
.. .........+.. ....+++.+.+++.+||.. ||++|++..+.+
T Consensus 237 ~k----i~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~-DP~kR~ss~eeL 283 (932)
T PRK13184 237 RK----ISYRDVILSPIEVAPYREIPPFLSQIAMKALAV-DPAERYSSVQEL 283 (932)
T ss_pred hh----hhhhhhccChhhccccccCCHHHHHHHHHHccC-ChhhCcCHHHHH
Confidence 21 111111111111 1235788899999999999 999998765544
No 336
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.9e-38 Score=270.86 Aligned_cols=231 Identities=21% Similarity=0.319 Sum_probs=182.4
Q ss_pred CCCcceeeeeecCCcceEEEEEEEcc----CCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCc
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQ----TLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGE 127 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~----~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 127 (300)
..++|++.+.||+|+||.||+|.+.. ++..|++|.+...... ..+.+|+.++++++|+||+++++++......
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 35689999999999999999999876 3578999988643221 2235799999999999999999987765557
Q ss_pred EEEEEeccCCCCHHHHHHhC--------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce--
Q 040812 128 VSILMEYMDAGSLEIYVKSR--------GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS-- 197 (300)
Q Consensus 128 ~~lv~e~~~~~~L~~~l~~~--------~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~-- 197 (300)
.+++++|+.+++|.+++... ..+++..+..++.|++.||.|||+.+++|+||||+||+++.++...+..+
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~ 163 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNAL 163 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCC
Confidence 89999999999999998753 35889999999999999999999999999999999999987655433221
Q ss_pred -------------------eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCC
Q 040812 198 -------------------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFRE 257 (300)
Q Consensus 198 -------------------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~ 257 (300)
..|.+||... +..++.++|||||||++||+++ |+.||..... ...........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~y~apE~~~---~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~----~~~~~~~~~~~ 236 (280)
T cd05043 164 SRDLFPMDYHCLGDNENRPVKWMALESLV---NKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP----FEMAAYLKDGY 236 (280)
T ss_pred cccccCCceEEeCCCCCcchhccCHHHHh---cCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH----HHHHHHHHcCC
Confidence 1244444432 4456789999999999999999 9999965432 12222222333
Q ss_pred CCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 258 PPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 258 ~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
....+..+++++.+++.+||.. ||++|||+.++++
T Consensus 237 ~~~~~~~~~~~~~~li~~~l~~-~p~~Rps~~~~~~ 271 (280)
T cd05043 237 RLAQPINCPDELFAVMACCWAL-DPEERPSFSQLVQ 271 (280)
T ss_pred CCCCCCcCCHHHHHHHHHHcCC-ChhhCCCHHHHHH
Confidence 4445566789999999999999 9999999999874
No 337
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=1.4e-38 Score=272.01 Aligned_cols=234 Identities=32% Similarity=0.433 Sum_probs=180.4
Q ss_pred ceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC---CCHHHHHHHHhcC-CCceeEeceeeeCCCCcEEEEEec
Q 040812 59 LEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP---PNPQELNILRQTN-SPYIVKCHQIFTKPSGEVSILMEY 134 (300)
Q Consensus 59 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~lv~e~ 134 (300)
|++.+.||+|+||.||+|....+++.||+|.+....... ...+|+..+++++ |+||+++++++... +..|+||||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~-~~~~lv~e~ 79 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFREN-DELYFVFEY 79 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcC-CcEEEEEec
Confidence 678899999999999999999999999999986543221 1246889999999 99999999998875 489999999
Q ss_pred cCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc----------------
Q 040812 135 MDAGSLEIYVKSRG--RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY---------------- 196 (300)
Q Consensus 135 ~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~---------------- 196 (300)
+ +++|.+++.... .+++..+..++.|++.+|.|||++|++|+||+|+||+++.++...+..
T Consensus 80 ~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~ 158 (283)
T cd07830 80 M-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDY 158 (283)
T ss_pred C-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCC
Confidence 9 779998887654 789999999999999999999999999999999999999865443221
Q ss_pred --eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhh--------------CCC--
Q 040812 197 --SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICF--------------REP-- 258 (300)
Q Consensus 197 --~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~--------------~~~-- 258 (300)
+..|.+||.... +...+.++|+||||+++|||++|+.||.................. ...
T Consensus 159 ~~~~~~~aPE~~~~--~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd07830 159 VSTRWYRAPEILLR--STSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFR 236 (283)
T ss_pred CCcccccCceeeec--CcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccc
Confidence 223455655432 234577999999999999999999999654332222111110000 000
Q ss_pred ---------CCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCC
Q 040812 259 ---------PSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFL 297 (300)
Q Consensus 259 ---------~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~ 297 (300)
.......+..+.++|.+||+. ||++|||+.|++.||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~-~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 237 FPQFAPTSLHQLIPNASPEAIDLIKDMLRW-DPKKRPTASQALQHPYF 283 (283)
T ss_pred ccccccccHHHHcccCCHHHHHHHHHhccc-CcccCCCHHHHhhCCCC
Confidence 001112367899999999999 99999999999999998
No 338
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.1e-38 Score=274.33 Aligned_cols=233 Identities=21% Similarity=0.289 Sum_probs=177.2
Q ss_pred CCcceeeeeecCCcceEEEEEEEccC--------------CeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEec
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQT--------------LALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCH 118 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~--------------~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~ 118 (300)
.++|++.+.||+|+||.||+|.+..+ ...||+|.++..... ..+.+|++++++++|+|+++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 45899999999999999999987543 235899998754322 2346799999999999999999
Q ss_pred eeeeCCCCcEEEEEeccCCCCHHHHHHhCC------------CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceee
Q 040812 119 QIFTKPSGEVSILMEYMDAGSLEIYVKSRG------------RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLI 186 (300)
Q Consensus 119 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~------------~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill 186 (300)
+++.... ..|+||||+.+++|.+++.... .+++..+..++.|++.||.|||++|++|+||||+||++
T Consensus 84 ~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill 162 (295)
T cd05097 84 GVCVSDD-PLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLV 162 (295)
T ss_pred EEEcCCC-ccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEE
Confidence 9987654 8999999999999999986532 36788899999999999999999999999999999999
Q ss_pred cCCCCCCccce---------------------eeccccccccccCCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCCC
Q 040812 187 NEKMEHPCGYS---------------------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM--GYYPFLEPGQE 243 (300)
Q Consensus 187 ~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt--g~~pf~~~~~~ 243 (300)
+.++...+.++ ..|.+||... ++.++.++|||||||++|+|+| |..||......
T Consensus 163 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~ 239 (295)
T cd05097 163 GNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESIL---LGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE 239 (295)
T ss_pred cCCCcEEecccccccccccCcceeccCcCcCceeecChhhhc---cCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH
Confidence 87754433221 1234444332 4556889999999999999998 67888654332
Q ss_pred chHHHHHHHH---hhCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 244 PDFLSLMLAI---CFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 244 ~~~~~~~~~~---~~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
.......... ........+...++.+.+++.+||.. ||++||+++++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~-~p~~RPs~~~i~~ 291 (295)
T cd05097 240 QVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSR-DIKDRPTFNKIHH 291 (295)
T ss_pred HHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCC-CchhCcCHHHHHH
Confidence 2111111111 11112233455788999999999999 9999999999975
No 339
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3e-38 Score=276.45 Aligned_cols=230 Identities=23% Similarity=0.327 Sum_probs=181.2
Q ss_pred CCcceeeeeecCCcceEEEEEEEccC-------CeEEEEEEeecCCCC---CCCHHHHHHHHhc-CCCceeEeceeeeCC
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQT-------LALYALKVMQCDRGT---PPNPQELNILRQT-NSPYIVKCHQIFTKP 124 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~~~~~---~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 124 (300)
..+|++.+.||+|+||.||+|.+... ...||+|.++..... ..+.+|+.+++++ +|+||+++++++...
T Consensus 11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (334)
T cd05100 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 90 (334)
T ss_pred HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC
Confidence 35799999999999999999986432 236899988754322 2346799999999 899999999998765
Q ss_pred CCcEEEEEeccCCCCHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecC
Q 040812 125 SGEVSILMEYMDAGSLEIYVKSRG----------------RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINE 188 (300)
Q Consensus 125 ~~~~~lv~e~~~~~~L~~~l~~~~----------------~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~ 188 (300)
. ..++||||+++|+|.+++.... .++...+..++.|++.||.|||++|++||||||+||+++.
T Consensus 91 ~-~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~ 169 (334)
T cd05100 91 G-PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTE 169 (334)
T ss_pred C-ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcC
Confidence 4 8999999999999999997532 3678889999999999999999999999999999999987
Q ss_pred CCCCCccce---------------------eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchH
Q 040812 189 KMEHPCGYS---------------------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDF 246 (300)
Q Consensus 189 ~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~ 246 (300)
++...++.+ ..|.+||... +..++.++|||||||++|||++ |..||.....
T Consensus 170 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~---- 242 (334)
T cd05100 170 DNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALF---DRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV---- 242 (334)
T ss_pred CCcEEECCcccceecccccccccccCCCcCceEcCHHHhc---cCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH----
Confidence 654332221 1245555443 4456779999999999999998 8899965332
Q ss_pred HHHHHHHhhCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcC
Q 040812 247 LSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~h 294 (300)
......+........+...+..+.+++.+||.. +|++||++.+++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~-~p~~Rps~~ell~~ 289 (334)
T cd05100 243 EELFKLLKEGHRMDKPANCTHELYMIMRECWHA-VPSQRPTFKQLVED 289 (334)
T ss_pred HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccc-ChhhCcCHHHHHHH
Confidence 223333333445556677889999999999999 99999999999865
No 340
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.1e-38 Score=272.81 Aligned_cols=231 Identities=23% Similarity=0.329 Sum_probs=181.3
Q ss_pred CCCcceeeeeecCCcceEEEEEEEc-------cCCeEEEEEEeecCCCC---CCCHHHHHHHHhc-CCCceeEeceeeeC
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHK-------QTLALYALKVMQCDRGT---PPNPQELNILRQT-NSPYIVKCHQIFTK 123 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~-------~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l-~h~niv~~~~~~~~ 123 (300)
..++|++.+.||+|+||.||+|++. ..+..||+|.+...... ....+|+.+++.+ +||||+++++++..
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 4577899999999999999999753 23457999988643222 2345799999999 89999999999887
Q ss_pred CCCcEEEEEeccCCCCHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeec
Q 040812 124 PSGEVSILMEYMDAGSLEIYVKSR----------------GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLIN 187 (300)
Q Consensus 124 ~~~~~~lv~e~~~~~~L~~~l~~~----------------~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~ 187 (300)
.. ..|+||||+.+++|.+++... ..++...+..++.||+.||.|||++|++||||||+||+++
T Consensus 93 ~~-~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~ 171 (304)
T cd05101 93 DG-PLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVT 171 (304)
T ss_pred CC-ceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEc
Confidence 54 899999999999999999753 2367888999999999999999999999999999999998
Q ss_pred CCCCCCccce---------------------eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCch
Q 040812 188 EKMEHPCGYS---------------------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPD 245 (300)
Q Consensus 188 ~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~ 245 (300)
.++...++++ ..|.+||... +..++.++|||||||++|+|+| |..||.....
T Consensus 172 ~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--- 245 (304)
T cd05101 172 ENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALF---DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--- 245 (304)
T ss_pred CCCcEEECCCccceecccccccccccCCCCCceeeCchhhc---cCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH---
Confidence 7654332221 1245555442 4556789999999999999998 7888854322
Q ss_pred HHHHHHHHhhCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcC
Q 040812 246 FLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~h 294 (300)
...............+..++..+.+++.+||.. +|++|||+.++++.
T Consensus 246 -~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~-~p~~Rps~~e~l~~ 292 (304)
T cd05101 246 -EELFKLLKEGHRMDKPANCTNELYMMMRDCWHA-IPSHRPTFKQLVED 292 (304)
T ss_pred -HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHccc-ChhhCCCHHHHHHH
Confidence 223333333444455677889999999999999 99999999999863
No 341
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=4.4e-38 Score=268.48 Aligned_cols=229 Identities=23% Similarity=0.319 Sum_probs=182.6
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCe----EEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCc
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLA----LYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGE 127 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 127 (300)
...+|++.+.||+|+||.||+|.++.+++ .+|+|........ ..+.+|+.++++++|+||+++++++.. +.
T Consensus 5 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~ 82 (279)
T cd05057 5 KETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS--SQ 82 (279)
T ss_pred CHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec--Cc
Confidence 34678999999999999999999876654 5899987655432 234579999999999999999999876 47
Q ss_pred EEEEEeccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce---------
Q 040812 128 VSILMEYMDAGSLEIYVKSR-GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS--------- 197 (300)
Q Consensus 128 ~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~--------- 197 (300)
.++||||+++|+|.+++... ..+++..+..++.||+.||.|||+.|++||||||+||+++.++...+.++
T Consensus 83 ~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~ 162 (279)
T cd05057 83 VQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVD 162 (279)
T ss_pred eEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCc
Confidence 99999999999999999764 46899999999999999999999999999999999999987654332221
Q ss_pred ------------eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCC
Q 040812 198 ------------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPEC 264 (300)
Q Consensus 198 ------------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (300)
..|.+||... +..++.++|+|||||++||++| |+.||..... ......+........+..
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~---~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~ 235 (279)
T cd05057 163 EKEYHAEGGKVPIKWMALESIL---HRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA----VEIPDLLEKGERLPQPPI 235 (279)
T ss_pred ccceecCCCcccccccCHHHhh---cCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH----HHHHHHHhCCCCCCCCCC
Confidence 1244444332 3456779999999999999999 9999965432 122233333445556667
Q ss_pred CChHHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 265 SSEKFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 265 ~~~~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
.+..+.+++.+||.. ||++||++.++++
T Consensus 236 ~~~~~~~~~~~~l~~-~p~~Rp~~~~l~~ 263 (279)
T cd05057 236 CTIDVYMVLVKCWMI-DAESRPTFKELIN 263 (279)
T ss_pred CCHHHHHHHHHHcCC-ChhhCCCHHHHHH
Confidence 888999999999999 9999999998763
No 342
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=3e-38 Score=276.16 Aligned_cols=238 Identities=26% Similarity=0.297 Sum_probs=179.6
Q ss_pred cceeeeeecCCcceEEEEEEEccC--CeEEEEEEeecCCCC----CCCHHHHHHHHhc-CCCceeEeceeeeCC---CCc
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQT--LALYALKVMQCDRGT----PPNPQELNILRQT-NSPYIVKCHQIFTKP---SGE 127 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~--~~~vaiK~~~~~~~~----~~~~~E~~~l~~l-~h~niv~~~~~~~~~---~~~ 127 (300)
+|++.+.||+|+||.||++.+..+ +..||+|.+...... ....+|+.+++++ +|+||+++++..... ...
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 488999999999999999999887 889999998643222 2235699999998 599999999864321 235
Q ss_pred EEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-----------
Q 040812 128 VSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY----------- 196 (300)
Q Consensus 128 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~----------- 196 (300)
.|++++|+. ++|.+++.....+++..++.++.||+.||.|||++|++||||||+||+++.++...+..
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~ 159 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENP 159 (332)
T ss_pred EEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceeccccc
Confidence 889999996 59999998777899999999999999999999999999999999999998775543222
Q ss_pred ------------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHH------------
Q 040812 197 ------------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLA------------ 252 (300)
Q Consensus 197 ------------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~------------ 252 (300)
+..|.+||.... ...++.++|||||||++|+|++|..||...+........+..
T Consensus 160 ~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (332)
T cd07857 160 GENAGFMTEYVATRWYRAPEIMLS--FQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRI 237 (332)
T ss_pred ccccccccCcccCccccCcHHHhC--CCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence 223455554321 234677999999999999999999999654321111100000
Q ss_pred -----------HhhCCCC---CCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 253 -----------ICFREPP---SLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 253 -----------~~~~~~~---~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
....... ......+..+.+++.+||.. ||++|||+.++++||||++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~-~P~~R~t~~~ll~~~~~~~ 297 (332)
T cd07857 238 GSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAF-DPTKRISVEEALEHPYLAI 297 (332)
T ss_pred hhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccC-CcccCCCHHHHhcChhhhh
Confidence 0000001 11123578899999999999 9999999999999999963
No 343
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=4.1e-38 Score=264.46 Aligned_cols=221 Identities=25% Similarity=0.355 Sum_probs=177.5
Q ss_pred eeecCCcceEEEEEEEccCCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEeccCCCC
Q 040812 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGS 139 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~~~ 139 (300)
+.||+|+||.||++.+.. ++.||+|.+...... ..+.+|+.++++++|+||+++++++.... ..++||||+.+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~~v~e~~~~~~ 78 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQ-PIYIVMELVPGGS 78 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCC-CeEEEEEcCCCCc
Confidence 469999999999999988 899999988754432 23467999999999999999999988764 8999999999999
Q ss_pred HHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce---------------------
Q 040812 140 LEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS--------------------- 197 (300)
Q Consensus 140 L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~--------------------- 197 (300)
|.+++.. ...+++..+..++.|++.||.|||+++++||||||+||+++.++...+.++
T Consensus 79 l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~ 158 (251)
T cd05041 79 LLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIP 158 (251)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcce
Confidence 9999965 346899999999999999999999999999999999999987654332221
Q ss_pred eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHH
Q 040812 198 CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276 (300)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 276 (300)
..|.+||... ++.++.++|||||||++|||+| |..||...... ..............+...+..+.+++.+|
T Consensus 159 ~~y~~PE~~~---~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 231 (251)
T cd05041 159 IKWTAPEALN---YGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ----QTRERIESGYRMPAPQLCPEEIYRLMLQC 231 (251)
T ss_pred eccCChHhhc---cCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH----HHHHHHhcCCCCCCCccCCHHHHHHHHHH
Confidence 1244555432 4567789999999999999999 89999654332 11122222334455677889999999999
Q ss_pred hccCCCCCCCCHHHHhc
Q 040812 277 LQKGDPSKRWTASQLLS 293 (300)
Q Consensus 277 l~~~dp~~Rpt~~~~l~ 293 (300)
|.. +|++|||+.++++
T Consensus 232 l~~-~p~~Rp~~~ell~ 247 (251)
T cd05041 232 WAY-DPENRPSFSEIYN 247 (251)
T ss_pred hcc-ChhhCcCHHHHHH
Confidence 999 9999999999985
No 344
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=2.8e-38 Score=272.05 Aligned_cols=233 Identities=20% Similarity=0.313 Sum_probs=176.0
Q ss_pred CCcceeeeeecCCcceEEEEEEEcc----------------CCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeE
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQ----------------TLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVK 116 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~----------------~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~ 116 (300)
.++|++.+.||+|+||.||++.+.. +...+|+|++...... ..+.+|+.++++++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 3579999999999999999986542 3457999998754322 23467999999999999999
Q ss_pred eceeeeCCCCcEEEEEeccCCCCHHHHHHhCC-----------CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCcee
Q 040812 117 CHQIFTKPSGEVSILMEYMDAGSLEIYVKSRG-----------RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVL 185 (300)
Q Consensus 117 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----------~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nil 185 (300)
+++++.... ..|+||||+.+++|.+++.... .+++..+..++.|++.||.|||+.|++|+||||+||+
T Consensus 84 ~~~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nil 162 (296)
T cd05095 84 LLAVCITSD-PLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCL 162 (296)
T ss_pred EEEEEecCC-ccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEE
Confidence 999987755 7999999999999999997532 3667889999999999999999999999999999999
Q ss_pred ecCCCCCCcccee---------------------eccccccccccCCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCC
Q 040812 186 INEKMEHPCGYSC---------------------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYM--GYYPFLEPGQ 242 (300)
Q Consensus 186 l~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt--g~~pf~~~~~ 242 (300)
++.++...+++++ .|.+||. ..++.++.++|||||||++|||+| |..||.....
T Consensus 163 i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~---~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~ 239 (296)
T cd05095 163 VGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWES---ILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSD 239 (296)
T ss_pred EcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHH---HhcCCccchhhhhHHHHHHHHHHHhCCCCCccccCh
Confidence 9876554322211 1222322 224557789999999999999998 7889965433
Q ss_pred CchHHHHHH---HHhhCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 243 EPDFLSLML---AICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 243 ~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
......... ..........+..+++.+.+++.+||+. ||++||++.++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~-~p~~Rp~~~~i~~ 292 (296)
T cd05095 240 EQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRR-NAKERPSFQEIHA 292 (296)
T ss_pred HHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCC-CcccCCCHHHHHH
Confidence 222111111 0011112233456778999999999999 9999999999864
No 345
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=5.6e-39 Score=270.98 Aligned_cols=222 Identities=20% Similarity=0.318 Sum_probs=169.9
Q ss_pred eeecCCcceEEEEEEEccCCe-------EEEEEEeecCCCC--CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 63 QVLGQGNGGTVFKVRHKQTLA-------LYALKVMQCDRGT--PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~~~-------~vaiK~~~~~~~~--~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
+.||+|+||.||+|.+..++. .+|+|.+...... ..+.+|+.+++.+.||||+++++++..+. ..++|||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~-~~~lv~e 79 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGD-ESIMVQE 79 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCC-CcEEEEe
Confidence 369999999999999865543 3888887543221 23466899999999999999999988754 7899999
Q ss_pred ccCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCC-----------Ccc------
Q 040812 134 YMDAGSLEIYVKSRG-RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEH-----------PCG------ 195 (300)
Q Consensus 134 ~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~-----------~~~------ 195 (300)
|+++|+|.+++...+ .+++..+..++.||+.||.|||++||+||||||+||+++.++.. ++|
T Consensus 80 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~ 159 (258)
T cd05078 80 YVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVL 159 (258)
T ss_pred cCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccC
Confidence 999999999997644 58999999999999999999999999999999999999876432 111
Q ss_pred ------ceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCC-CCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChH
Q 040812 196 ------YSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGY-YPFLEPGQEPDFLSLMLAICFREPPSLPECSSEK 268 (300)
Q Consensus 196 ------~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~-~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (300)
....|.+||.... +..++.++|||||||++|||++|. .||..... ...... ......++...+.+
T Consensus 160 ~~~~~~~~~~y~aPE~~~~--~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~~ 231 (258)
T cd05078 160 PKEILLERIPWVPPECIEN--PQNLSLAADKWSFGTTLWEIFSGGDKPLSALDS-QKKLQF-----YEDRHQLPAPKWTE 231 (258)
T ss_pred CchhccccCCccCchhccC--CCCCCchhhHHHHHHHHHHHHcCCCCChhhccH-HHHHHH-----HHccccCCCCCcHH
Confidence 1123455554431 234577999999999999999984 66643222 111111 12234556666789
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHhcC
Q 040812 269 FRDFIRCCLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 269 l~~li~~~l~~~dp~~Rpt~~~~l~h 294 (300)
+.++|.+||+. ||++|||++++++.
T Consensus 232 ~~~li~~~l~~-~p~~Rps~~~il~~ 256 (258)
T cd05078 232 LANLINQCMDY-EPDFRPSFRAIIRD 256 (258)
T ss_pred HHHHHHHHhcc-ChhhCCCHHHHHHh
Confidence 99999999999 99999999999864
No 346
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=3.6e-38 Score=267.75 Aligned_cols=228 Identities=27% Similarity=0.326 Sum_probs=180.8
Q ss_pred CcceeeeeecCCcceEEEEEEEccC---CeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQT---LALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSI 130 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~l 130 (300)
.+|.+.+.||+|+||.||+|.+... ...||+|........ ..+.+|+.++++++|+||+++++++.. ...|+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~l 83 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE--NPVWI 83 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC--CCcEE
Confidence 5688999999999999999997643 457899987654321 235679999999999999999998865 36789
Q ss_pred EEeccCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce------------
Q 040812 131 LMEYMDAGSLEIYVKSRG-RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS------------ 197 (300)
Q Consensus 131 v~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~------------ 197 (300)
||||+++++|.+++.... .+++..+..++.|++.||.|||+.|++|+||||+||+++.++...+..+
T Consensus 84 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~ 163 (270)
T cd05056 84 VMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYY 163 (270)
T ss_pred EEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecccccce
Confidence 999999999999997644 5899999999999999999999999999999999999988655433221
Q ss_pred --------eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChH
Q 040812 198 --------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEK 268 (300)
Q Consensus 198 --------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (300)
..|.+||.. .+..++.++|||||||++|||++ |..||...... ..............+..++..
T Consensus 164 ~~~~~~~~~~y~aPE~~---~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 236 (270)
T cd05056 164 KASKGKLPIKWMAPESI---NFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN----DVIGRIENGERLPMPPNCPPT 236 (270)
T ss_pred ecCCCCccccccChhhh---ccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH----HHHHHHHcCCcCCCCCCCCHH
Confidence 124455543 24456789999999999999986 99999655432 222223334444566778899
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHhcC
Q 040812 269 FRDFIRCCLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 269 l~~li~~~l~~~dp~~Rpt~~~~l~h 294 (300)
+.++|.+||.. +|++|||+.+++..
T Consensus 237 ~~~li~~~l~~-~P~~Rpt~~~~~~~ 261 (270)
T cd05056 237 LYSLMTKCWAY-DPSKRPRFTELKAQ 261 (270)
T ss_pred HHHHHHHHcCC-ChhhCcCHHHHHHH
Confidence 99999999999 99999999998753
No 347
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=6.2e-38 Score=265.00 Aligned_cols=224 Identities=21% Similarity=0.322 Sum_probs=171.9
Q ss_pred eeecCCcceEEEEEEEcc---CCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEeccC
Q 040812 63 QVLGQGNGGTVFKVRHKQ---TLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMD 136 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~ 136 (300)
+.||+|+||.||+|.+.. ....+|+|.+...... ..+.+|+.+++.++||||+++++++...++..++||||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 468999999999999753 3467999987543221 2345689999999999999999977655557899999999
Q ss_pred CCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcccee-----------------
Q 040812 137 AGSLEIYVKSR-GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSC----------------- 198 (300)
Q Consensus 137 ~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~----------------- 198 (300)
+++|.+++... ..+++..+..++.|++.||.|||+.+++||||||+|||++.++...+++++
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 160 (262)
T cd05058 81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHT 160 (262)
T ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeecccc
Confidence 99999999764 356788889999999999999999999999999999999987654332221
Q ss_pred ------eccccccccccCCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHH
Q 040812 199 ------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYMG-YYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRD 271 (300)
Q Consensus 199 ------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (300)
.|.+||... +..++.++|||||||++|||++| .+||.... . ............+..+...++.+.+
T Consensus 161 ~~~~~~~y~aPE~~~---~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (262)
T cd05058 161 GAKLPVKWMALESLQ---TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD-S---FDITVYLLQGRRLLQPEYCPDPLYE 233 (262)
T ss_pred cCcCCccccChhHhc---cCccchHHHHHHHHHHHHHHHcCCCCCCCCCC-H---HHHHHHHhcCCCCCCCCcCCHHHHH
Confidence 234444332 34567799999999999999995 55664322 1 2233333334445556667889999
Q ss_pred HHHHHhccCCCCCCCCHHHHhcC
Q 040812 272 FIRCCLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 272 li~~~l~~~dp~~Rpt~~~~l~h 294 (300)
++.+||.. +|++||++.++++.
T Consensus 234 li~~cl~~-~p~~Rp~~~~il~~ 255 (262)
T cd05058 234 VMLSCWHP-KPEMRPTFSELVSR 255 (262)
T ss_pred HHHHHcCC-ChhhCCCHHHHHHH
Confidence 99999999 99999999999863
No 348
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-39 Score=271.86 Aligned_cols=237 Identities=27% Similarity=0.432 Sum_probs=200.3
Q ss_pred CCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCC-----HHHHHHHHhc-CCCceeEeceeeeCCCCc
Q 040812 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-----PQELNILRQT-NSPYIVKCHQIFTKPSGE 127 (300)
Q Consensus 54 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~-----~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 127 (300)
....+|..+.+||+|+||+|-++..+.+.+.+|||+++++...+.. ..|-++|... +-|.+++++.+|..-. .
T Consensus 346 i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmD-R 424 (683)
T KOG0696|consen 346 IKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMD-R 424 (683)
T ss_pred eeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhh-h
Confidence 3456789999999999999999999999999999999876544322 4566666654 4578999999998755 8
Q ss_pred EEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcc------------
Q 040812 128 VSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG------------ 195 (300)
Q Consensus 128 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~------------ 195 (300)
+|+||||+.||+|.-.+++-++|.+..+..++..|+.||-|||++||+.||||.+|||++.++..++.
T Consensus 425 LyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~ 504 (683)
T KOG0696|consen 425 LYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDG 504 (683)
T ss_pred eeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999988765332
Q ss_pred -------ceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChH
Q 040812 196 -------YSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEK 268 (300)
Q Consensus 196 -------~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (300)
++.-|.+||.... ..|+.++|+||+||+||||+.|++||.+.+++.-+..++ .....+|..+|.+
T Consensus 505 ~TTkTFCGTPdYiAPEIi~Y---qPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~-----ehnvsyPKslSkE 576 (683)
T KOG0696|consen 505 VTTKTFCGTPDYIAPEIIAY---QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIM-----EHNVSYPKSLSKE 576 (683)
T ss_pred cceeeecCCCcccccceEEe---cccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH-----HccCcCcccccHH
Confidence 3445677776653 358889999999999999999999998876655444444 3456788899999
Q ss_pred HHHHHHHHhccCCCCCCCC-----HHHHhcCCCCCCC
Q 040812 269 FRDFIRCCLQKGDPSKRWT-----ASQLLSHPFLADA 300 (300)
Q Consensus 269 l~~li~~~l~~~dp~~Rpt-----~~~~l~hpw~~~~ 300 (300)
..+++...|.+ .|.+|.. -.++-.||||+.+
T Consensus 577 Av~ickg~ltK-~P~kRLGcg~~ge~di~~H~FFR~i 612 (683)
T KOG0696|consen 577 AVAICKGLLTK-HPGKRLGCGPEGERDIREHPFFRRI 612 (683)
T ss_pred HHHHHHHHhhc-CCccccCCCCccccchhhCcchhhc
Confidence 99999999999 9999985 4689999999864
No 349
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-38 Score=275.98 Aligned_cols=240 Identities=26% Similarity=0.367 Sum_probs=182.7
Q ss_pred cCCccCCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCC--CCCCHHHHHHHHhcCCCceeEeceeeeCCCC
Q 040812 49 YGQEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG--TPPNPQELNILRQTNSPYIVKCHQIFTKPSG 126 (300)
Q Consensus 49 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 126 (300)
+......+++|.-...||+|+||.||+|...++ ..||||.+..... ...|.+|+.++.+++|||+|+++|+|.+..+
T Consensus 67 ~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~-~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~ 145 (361)
T KOG1187|consen 67 YDELRKATNNFSESNLIGEGGFGTVYKGVLSDG-TVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCLEGGE 145 (361)
T ss_pred HHHHHHHHhCCchhcceecCCCeEEEEEEECCC-CEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEecCCc
Confidence 334445667888889999999999999999874 8999998876554 3568999999999999999999999987542
Q ss_pred cEEEEEeccCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHhHhCC---ccccCCCCCceeecCCCCCCccceee--
Q 040812 127 EVSILMEYMDAGSLEIYVKSRG--RLSEDIICTISRQVLKGLFYMHSRN---IVHRDIKPANVLINEKMEHPCGYSCL-- 199 (300)
Q Consensus 127 ~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~lH~~~---i~H~Dlkp~Nill~~~~~~~~~~~~~-- 199 (300)
..+||+||+++|+|.+++.... .++|.....|+.+++.||.|||... |+|||||++|||+|++...++.++++
T Consensus 146 ~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~ 225 (361)
T KOG1187|consen 146 HRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAK 225 (361)
T ss_pred eEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcc
Confidence 4899999999999999998654 7899999999999999999999753 99999999999999887765544332
Q ss_pred ------------------ccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--CCchHHHHHHHHhhC---
Q 040812 200 ------------------YESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPG--QEPDFLSLMLAICFR--- 256 (300)
Q Consensus 200 ------------------~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~--~~~~~~~~~~~~~~~--- 256 (300)
|.+||... .+..+.++|||||||+|.|++||+.+..... ...............
T Consensus 226 ~~~~~~~~~~~~~~gt~gY~~PEy~~---~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~ 302 (361)
T KOG1187|consen 226 LGPEGDTSVSTTVMGTFGYLAPEYAS---TGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKL 302 (361)
T ss_pred cCCccccceeeecCCCCccCChhhhc---cCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcch
Confidence 33333322 2456779999999999999999998886432 222222221111111
Q ss_pred ---CCCCCC-CCCC-----hHHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 257 ---EPPSLP-ECSS-----EKFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 257 ---~~~~~~-~~~~-----~~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
..+.+. .... ..+..+..+|++. +|.+||++.++++
T Consensus 303 ~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~-~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 303 REIVDPRLKEGEYPDEKEVKKLAELALRCLRP-DPKERPTMSQVVK 347 (361)
T ss_pred hheeCCCccCCCCChHHHHHHHHHHHHHHcCc-CCCcCcCHHHHHH
Confidence 112222 2222 2366778899999 9999999999764
No 350
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=6.8e-38 Score=264.61 Aligned_cols=228 Identities=25% Similarity=0.366 Sum_probs=179.7
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCC-CCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG-TPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
..++|++.+.||+|+||.||++.+.. +..+|+|.+..... ...+.+|+.++++++|+||+++++.+.. +..++|||
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~~-~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~v~e 80 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYNK-HTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK--EPIYIITE 80 (260)
T ss_pred cccceeEEeEecCccceEEEEEEecC-CccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC--CCeEEEEE
Confidence 34679999999999999999998764 45689998865432 2345679999999999999999998876 47899999
Q ss_pred ccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcccee-------------
Q 040812 134 YMDAGSLEIYVKSR--GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSC------------- 198 (300)
Q Consensus 134 ~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~------------- 198 (300)
|+++++|.+++... ..+++..+..++.|++.||.|||+.|++|+||||+||+++.++...++++.
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 160 (260)
T cd05073 81 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR 160 (260)
T ss_pred eCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcccc
Confidence 99999999999753 357888999999999999999999999999999999999887655433221
Q ss_pred -------eccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHH
Q 040812 199 -------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFR 270 (300)
Q Consensus 199 -------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (300)
.|.+||... ++.++.++|+|||||++|+++| |..||...... ..............+...+.++.
T Consensus 161 ~~~~~~~~y~~PE~~~---~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 233 (260)
T cd05073 161 EGAKFPIKWTAPEAIN---FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP----EVIRALERGYRMPRPENCPEELY 233 (260)
T ss_pred cCCcccccccCHhHhc---cCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH----HHHHHHhCCCCCCCcccCCHHHH
Confidence 234444332 3456778999999999999999 99999654322 12222223334445567788999
Q ss_pred HHHHHHhccCCCCCCCCHHHHhc
Q 040812 271 DFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 271 ~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
+++.+||.. ||++||++.++++
T Consensus 234 ~~i~~~l~~-~p~~Rp~~~~l~~ 255 (260)
T cd05073 234 NIMMRCWKN-RPEERPTFEYIQS 255 (260)
T ss_pred HHHHHHccc-CcccCcCHHHHHH
Confidence 999999999 9999999998864
No 351
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=3.8e-38 Score=265.56 Aligned_cols=222 Identities=20% Similarity=0.316 Sum_probs=174.4
Q ss_pred eeecCCcceEEEEEEEcc-CC--eEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEeccC
Q 040812 63 QVLGQGNGGTVFKVRHKQ-TL--ALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMD 136 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~-~~--~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~ 136 (300)
+.||+|+||.||+|.+.. ++ ..||+|.+...... ..+.+|+.++++++|+||+++++.+.. ...++||||++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~v~e~~~ 78 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT--HPLMMVTELAP 78 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC--CeEEEEEEecC
Confidence 468999999999999865 33 36999998765442 234679999999999999999999876 48999999999
Q ss_pred CCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce-----------------
Q 040812 137 AGSLEIYVKSRG--RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS----------------- 197 (300)
Q Consensus 137 ~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~----------------- 197 (300)
+++|.+++.... .+++..+..++.|++.||.|||++|++|+||||+||+++.++...+.++
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 158 (257)
T cd05040 79 LGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEE 158 (257)
T ss_pred CCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceeccc
Confidence 999999998754 6899999999999999999999999999999999999988755433221
Q ss_pred -----eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHH
Q 040812 198 -----CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRD 271 (300)
Q Consensus 198 -----~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (300)
..|.+||... +..++.++|||||||++|||+| |..||....... ....... .......+...+..+.+
T Consensus 159 ~~~~~~~y~~pE~~~---~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~ 232 (257)
T cd05040 159 HLKVPFAWCAPESLR---TRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ-ILKKIDK--EGERLERPEACPQDIYN 232 (257)
T ss_pred CCCCCceecCHHHhc---ccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHh--cCCcCCCCccCCHHHHH
Confidence 1234444332 3456778999999999999999 999996543321 1111111 22333445667899999
Q ss_pred HHHHHhccCCCCCCCCHHHHhc
Q 040812 272 FIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 272 li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
++.+||.. +|++||++.++++
T Consensus 233 li~~~l~~-~p~~Rps~~~~~~ 253 (257)
T cd05040 233 VMLQCWAH-NPADRPTFAALRE 253 (257)
T ss_pred HHHHHCCC-CcccCCCHHHHHH
Confidence 99999999 9999999999975
No 352
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=9.4e-38 Score=262.10 Aligned_cols=222 Identities=24% Similarity=0.352 Sum_probs=176.4
Q ss_pred eeecCCcceEEEEEEEccCCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEeccCCCC
Q 040812 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGS 139 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~~~ 139 (300)
+.||+|+||.||+|... +++.+|+|.+...... ..+.+|+.++++++||||+++++++.... ..++||||+++++
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e~~~~~~ 78 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQ-PIYIVMELVPGGD 78 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCC-ccEEEEECCCCCc
Confidence 36899999999999865 5788999987654321 13467999999999999999999987754 8999999999999
Q ss_pred HHHHHHhC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce--------------------e
Q 040812 140 LEIYVKSR-GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS--------------------C 198 (300)
Q Consensus 140 L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~--------------------~ 198 (300)
|.+++... ..+++..+..++.|++.||.|||++|++|+||||+||+++.++...+..+ .
T Consensus 79 L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~ 158 (250)
T cd05085 79 FLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPI 158 (250)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCcc
Confidence 99998753 45899999999999999999999999999999999999987764322221 1
Q ss_pred eccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHh
Q 040812 199 LYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCL 277 (300)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 277 (300)
.|.+||... ++.++.++||||||+++|+|++ |..||...... .....+........+...+..+.+++.+||
T Consensus 159 ~y~aPE~~~---~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 231 (250)
T cd05085 159 KWTAPEALN---YGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ----QAREQVEKGYRMSCPQKCPDDVYKVMQRCW 231 (250)
T ss_pred cccCHHHhc---cCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH----HHHHHHHcCCCCCCCCCCCHHHHHHHHHHc
Confidence 244555432 4456779999999999999998 99999654322 222223334444556678899999999999
Q ss_pred ccCCCCCCCCHHHHhcC
Q 040812 278 QKGDPSKRWTASQLLSH 294 (300)
Q Consensus 278 ~~~dp~~Rpt~~~~l~h 294 (300)
.. +|++||++.++++.
T Consensus 232 ~~-~p~~Rp~~~~l~~~ 247 (250)
T cd05085 232 DY-KPENRPKFSELQKE 247 (250)
T ss_pred cc-CcccCCCHHHHHHH
Confidence 99 99999999999863
No 353
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=3.4e-38 Score=268.63 Aligned_cols=221 Identities=23% Similarity=0.370 Sum_probs=167.8
Q ss_pred eecCCcceEEEEEEEccC------------------------CeEEEEEEeecCCC--CCCCHHHHHHHHhcCCCceeEe
Q 040812 64 VLGQGNGGTVFKVRHKQT------------------------LALYALKVMQCDRG--TPPNPQELNILRQTNSPYIVKC 117 (300)
Q Consensus 64 ~lg~G~~g~V~~~~~~~~------------------------~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~h~niv~~ 117 (300)
.||+|+||.||+|....+ ...|++|++..... ...+.+|+.++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 599999999999985321 23588888754322 1234568889999999999999
Q ss_pred ceeeeCCCCcEEEEEeccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCC----
Q 040812 118 HQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEH---- 192 (300)
Q Consensus 118 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~---- 192 (300)
++++.... ..++||||+++|+|..++.. .+.+++..+..++.||+.||.|||++||+||||||+|||++..+..
T Consensus 82 ~~~~~~~~-~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~ 160 (274)
T cd05076 82 HGVCVRGS-ENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTS 160 (274)
T ss_pred EEEEEeCC-ceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCcc
Confidence 99988754 89999999999999999865 4578999999999999999999999999999999999999764321
Q ss_pred ------Cccc------------eeeccccccccccCCCCCCchhhHHHHHHHHHHH-HhCCCCCCCCCCCchHHHHHHHH
Q 040812 193 ------PCGY------------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMEL-YMGYYPFLEPGQEPDFLSLMLAI 253 (300)
Q Consensus 193 ------~~~~------------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~el-ltg~~pf~~~~~~~~~~~~~~~~ 253 (300)
++|. ...|.+||.... +..++.++|||||||++||| ++|..||....... .....
T Consensus 161 ~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~--~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~-~~~~~--- 234 (274)
T cd05076 161 PFIKLSDPGVSFTALSREERVERIPWIAPECVPG--GNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE-KERFY--- 234 (274)
T ss_pred ceeeecCCccccccccccccccCCcccCchhhcC--CCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH-HHHHH---
Confidence 1111 122445554321 24567899999999999999 47999996543321 11111
Q ss_pred hhCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcC
Q 040812 254 CFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 254 ~~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~h 294 (300)
......+...++.+.++|.+||.. +|++|||+.+++++
T Consensus 235 --~~~~~~~~~~~~~~~~li~~cl~~-~p~~Rps~~~il~~ 272 (274)
T cd05076 235 --EKKHRLPEPSCKELATLISQCLTY-EPTQRPSFRTILRD 272 (274)
T ss_pred --HhccCCCCCCChHHHHHHHHHccc-ChhhCcCHHHHHHh
Confidence 122334445567899999999999 99999999999875
No 354
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=4e-38 Score=267.19 Aligned_cols=222 Identities=25% Similarity=0.383 Sum_probs=174.1
Q ss_pred eeecCCcceEEEEEEEccCC------eEEEEEEeecCCC---CCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 63 QVLGQGNGGTVFKVRHKQTL------ALYALKVMQCDRG---TPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
+.||+|+||.||+|.+.... +.+|+|.+..... ...+.+|+.+++.++||||+++++++.... ..++|||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~~v~e 79 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNE-PQYIIME 79 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCC-CeEEEEe
Confidence 36999999999999986543 7899998865432 223467999999999999999999987654 8999999
Q ss_pred ccCCCCHHHHHHhC-------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCC-----CCCc---cce-
Q 040812 134 YMDAGSLEIYVKSR-------GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKM-----EHPC---GYS- 197 (300)
Q Consensus 134 ~~~~~~L~~~l~~~-------~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~-----~~~~---~~~- 197 (300)
|+++++|.+++... ..+++..+..++.|++.||.|||+.+++|+||||+||+++.+. ...+ |..
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~ 159 (269)
T cd05044 80 LMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLAR 159 (269)
T ss_pred ccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCccccc
Confidence 99999999999642 2478899999999999999999999999999999999998765 2222 211
Q ss_pred -----------------eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCC
Q 040812 198 -----------------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPP 259 (300)
Q Consensus 198 -----------------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 259 (300)
..|.+||... ++..+.++|||||||++|||+| |..||...... +....+......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~----~~~~~~~~~~~~ 232 (269)
T cd05044 160 DIYKSDYYRKEGEGLLPVRWMAPESLL---DGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ----EVLQHVTAGGRL 232 (269)
T ss_pred ccccccccccCcccCCCccccCHHHHc---cCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH----HHHHHHhcCCcc
Confidence 1234444432 4556789999999999999998 99999643321 222222333444
Q ss_pred CCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 260 SLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 260 ~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
..+...++.+.++|.+||.. +|++||++.++++
T Consensus 233 ~~~~~~~~~~~~li~~~l~~-~p~~Rp~~~~i~~ 265 (269)
T cd05044 233 QKPENCPDKIYQLMTNCWAQ-DPSERPTFDRIQE 265 (269)
T ss_pred CCcccchHHHHHHHHHHcCC-CcccCCCHHHHHH
Confidence 55667889999999999999 9999999999875
No 355
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=6.5e-38 Score=263.92 Aligned_cols=226 Identities=27% Similarity=0.386 Sum_probs=181.9
Q ss_pred ceeeeeecCCcceEEEEEEEccCC----eEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEE
Q 040812 59 LEKLQVLGQGNGGTVFKVRHKQTL----ALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 59 y~~~~~lg~G~~g~V~~~~~~~~~----~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv 131 (300)
+++.+.||.|+||.||++++..++ ..||+|.++..... ..+.+|+.+++.++|+||+++++++... +..+++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~~i 79 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEE-EPLMIV 79 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCC-CeeEEE
Confidence 356788999999999999998766 89999998755432 2446799999999999999999998876 489999
Q ss_pred EeccCCCCHHHHHHhCCC--CCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce------------
Q 040812 132 MEYMDAGSLEIYVKSRGR--LSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS------------ 197 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~~~~--l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~------------ 197 (300)
|||+++++|.+++..... +++..+..++.|++.||.+||+.|++|+||||+||+++.++...+.++
T Consensus 80 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~ 159 (258)
T smart00219 80 MEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYY 159 (258)
T ss_pred EeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceeccccccc
Confidence 999999999999976543 899999999999999999999999999999999999998764322211
Q ss_pred --------eeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChH
Q 040812 198 --------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEK 268 (300)
Q Consensus 198 --------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (300)
..|.+||.. .+..++.++|||||||++|+|++ |..||..... ...............+...+.+
T Consensus 160 ~~~~~~~~~~y~~Pe~~---~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 232 (258)
T smart00219 160 KKKGGKLPIRWMAPESL---KDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN----EEVLEYLKKGYRLPKPENCPPE 232 (258)
T ss_pred ccccCCCcccccChHHh---ccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH----HHHHHHHhcCCCCCCCCcCCHH
Confidence 223444433 24456789999999999999998 7888865322 2223333334455566678999
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 269 FRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 269 l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
+.+++.+||.. ||++|||+.++++
T Consensus 233 ~~~~i~~~l~~-~p~~Rpt~~~ll~ 256 (258)
T smart00219 233 IYKLMLQCWAE-DPEDRPTFSELVE 256 (258)
T ss_pred HHHHHHHHCcC-ChhhCcCHHHHHh
Confidence 99999999999 9999999999985
No 356
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=4.9e-38 Score=266.74 Aligned_cols=228 Identities=21% Similarity=0.325 Sum_probs=168.6
Q ss_pred eeecCCcceEEEEEEEcc--CCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEeccCC
Q 040812 63 QVLGQGNGGTVFKVRHKQ--TLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDA 137 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~ 137 (300)
+.||+|+||.||+|.... ....+|+|.+...... ..+.+|+..++.++|+||+++++.+.... ..|+||||+++
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~-~~~lv~e~~~~ 79 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESI-PYLLVLEFCPL 79 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCC-ceEEEEEeCCC
Confidence 369999999999997543 3457888877543322 12457999999999999999999987654 89999999999
Q ss_pred CCHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcccee--------------
Q 040812 138 GSLEIYVKSRG-----RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSC-------------- 198 (300)
Q Consensus 138 ~~L~~~l~~~~-----~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~-------------- 198 (300)
|+|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||++.++...+..++
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~ 159 (269)
T cd05042 80 GDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITK 159 (269)
T ss_pred CcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchheecc
Confidence 99999997632 24678889999999999999999999999999999999987654332211
Q ss_pred -------ecccccccccc----CCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHh-hCCCCCCCCCC
Q 040812 199 -------LYESGEARHRK----HGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAIC-FREPPSLPECS 265 (300)
Q Consensus 199 -------~~~~~~~~~~~----~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 265 (300)
.|.+||..... .+..++.++|||||||++|||++ |..||................. ....+..+...
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (269)
T cd05042 160 DCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKY 239 (269)
T ss_pred CCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccC
Confidence 24555553321 12345779999999999999999 7888865433221111111111 11122344567
Q ss_pred ChHHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 266 SEKFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 266 ~~~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
+..+.+++..|| . ||++|||++++++
T Consensus 240 ~~~~~~~~~~~~-~-dp~~Rpt~~~v~~ 265 (269)
T cd05042 240 SDRWYEVMQFCW-L-DPETRPTAEEVHE 265 (269)
T ss_pred CHHHHHHHHHHh-c-CcccccCHHHHHH
Confidence 888999999998 6 9999999999875
No 357
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.3e-40 Score=261.53 Aligned_cols=242 Identities=27% Similarity=0.370 Sum_probs=187.2
Q ss_pred cCCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC----CCHHHHHHHHhcCCCceeEeceeeeC-----
Q 040812 53 IDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP----PNPQELNILRQTNSPYIVKCHQIFTK----- 123 (300)
Q Consensus 53 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~E~~~l~~l~h~niv~~~~~~~~----- 123 (300)
.+..+.|+...+||+|.||.||+|+.+++++.||+|.+--+.... ...+|+.+|..++|+|++.+++++..
T Consensus 13 ~~~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~ 92 (376)
T KOG0669|consen 13 CDEVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPT 92 (376)
T ss_pred eecchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCc
Confidence 455678999999999999999999999999999998764333222 33789999999999999999887632
Q ss_pred --CCCcEEEEEeccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccceee-
Q 040812 124 --PSGEVSILMEYMDAGSLEIYVKSR-GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCL- 199 (300)
Q Consensus 124 --~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~~- 199 (300)
+.+.+|+||++|+. +|..++... .+|+..+++.+++++..||.|+|...|+|||+||+|+||+.++...+.+++.
T Consensus 93 ~r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGla 171 (376)
T KOG0669|consen 93 NRDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLA 171 (376)
T ss_pred ccccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccc
Confidence 12359999999998 899888765 5899999999999999999999999999999999999999986543333222
Q ss_pred ----------------------ccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCC
Q 040812 200 ----------------------YESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFRE 257 (300)
Q Consensus 200 ----------------------~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 257 (300)
|.+||.... ...++++.|||.-||||.||+||.+.|.+..+ ......+...+...
T Consensus 172 r~fs~~~n~~kprytnrvvTLwYrppEllLG--~r~yg~~iDiWgAgCimaeMwtrspimqgnte-qqql~~Is~LcGs~ 248 (376)
T KOG0669|consen 172 RAFSTSKNVVKPRYTNRVVTLWYRPPELLLG--DREYGPPIDIWGAGCIMAEMWTRSPIMQGNTE-QQQLHLISQLCGSI 248 (376)
T ss_pred cceecccccCCCCcccceeeeecCCHHHhhc--ccccCCcchhHhHHHHHHHHHccCccccCChH-HHHHHHHHHHhccC
Confidence 223332221 23568899999999999999999888865543 33333444444333
Q ss_pred CCCCCCCC-------------------------------ChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 258 PPSLPECS-------------------------------SEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 258 ~~~~~~~~-------------------------------~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
.++.+.++ .++..+|+.++|.. ||.+|++++++++|.||..
T Consensus 249 tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~-DP~kR~~ad~alnh~~F~k 320 (376)
T KOG0669|consen 249 TKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKL-DPTKRIDADQALNHDFFWK 320 (376)
T ss_pred CcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhcc-CcccCcchHhhhchhhhhc
Confidence 32222111 35788999999999 9999999999999999953
No 358
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=6.8e-38 Score=264.15 Aligned_cols=221 Identities=21% Similarity=0.314 Sum_probs=170.5
Q ss_pred eeecCCcceEEEEEEEccCC----------eEEEEEEeecCCC-CCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEE
Q 040812 63 QVLGQGNGGTVFKVRHKQTL----------ALYALKVMQCDRG-TPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~~----------~~vaiK~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv 131 (300)
+.||+|+||.||+|.+..++ ..+++|.+..... ...+.+|+.++++++|+||+++++++.. . ..++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~-~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR-D-ENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec-C-CcEEE
Confidence 46999999999999998766 4588888765443 3445679999999999999999998876 3 68999
Q ss_pred EeccCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCC-------CCCccc-------
Q 040812 132 MEYMDAGSLEIYVKSRG-RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKM-------EHPCGY------- 196 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~-------~~~~~~------- 196 (300)
|||+++++|.+++.... .+++..+..++.||+.||.|||++||+||||||+||+++.++ ...+++
T Consensus 79 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~ 158 (259)
T cd05037 79 EEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITV 158 (259)
T ss_pred EEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCccccc
Confidence 99999999999998765 789999999999999999999999999999999999998765 122211
Q ss_pred --------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCCh
Q 040812 197 --------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSE 267 (300)
Q Consensus 197 --------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (300)
...|.+||..... ...++.++|||||||++|+|++ |..||...... ....... .....+.....
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~-~~~~~~~-----~~~~~~~~~~~ 231 (259)
T cd05037 159 LSREERVERIPWIAPECIRNG-QASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS-EKERFYQ-----DQHRLPMPDCA 231 (259)
T ss_pred ccccccccCCCccChhhhcCC-CCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch-hHHHHHh-----cCCCCCCCCch
Confidence 1224455543321 1256789999999999999999 58888654322 1111111 11222222347
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 268 KFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 268 ~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
.+.++|.+||.. +|++|||+.++++
T Consensus 232 ~~~~li~~~l~~-~p~~Rpt~~~il~ 256 (259)
T cd05037 232 ELANLINQCWTY-DPTKRPSFRAILR 256 (259)
T ss_pred HHHHHHHHHhcc-ChhhCCCHHHHHH
Confidence 899999999999 9999999999985
No 359
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=9.6e-38 Score=265.01 Aligned_cols=228 Identities=20% Similarity=0.301 Sum_probs=169.0
Q ss_pred eeecCCcceEEEEEEEc--cCCeEEEEEEeecCCCCC---CCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEeccCC
Q 040812 63 QVLGQGNGGTVFKVRHK--QTLALYALKVMQCDRGTP---PNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDA 137 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~---~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~ 137 (300)
+.||+|+||.||+|.+. .++..+|+|.++...... .+.+|+.++++++||||+++++++.... ..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~e~~~~ 79 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVT-PYLLVMEFCPL 79 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC-CcEEEEECCCC
Confidence 36999999999999865 345679999886544321 3456999999999999999999987654 78999999999
Q ss_pred CCHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc----------------
Q 040812 138 GSLEIYVKSRG-----RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY---------------- 196 (300)
Q Consensus 138 ~~L~~~l~~~~-----~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~---------------- 196 (300)
|+|.+++.... .+++..+..++.|++.||.|||+.|++|+||||+||+++.++...+.+
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~ 159 (269)
T cd05087 80 GDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTP 159 (269)
T ss_pred CcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceeecC
Confidence 99999997522 356778889999999999999999999999999999998765432221
Q ss_pred -----eeeccccccccccCC----CCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHH-hhCCCCCCCCCC
Q 040812 197 -----SCLYESGEARHRKHG----GYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAI-CFREPPSLPECS 265 (300)
Q Consensus 197 -----~~~~~~~~~~~~~~~----~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 265 (300)
...|.+||......+ ..++.++|||||||++|||++ |..||................ .....+......
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (269)
T cd05087 160 DQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPL 239 (269)
T ss_pred CCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCC
Confidence 123556665542211 134679999999999999996 999996544332211111111 111112223346
Q ss_pred ChHHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 266 SEKFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 266 ~~~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
++.+.++|.+|+ . +|++|||+++++.
T Consensus 240 ~~~~~~l~~~c~-~-~P~~Rpt~~~l~~ 265 (269)
T cd05087 240 SDRWYEVMQFCW-L-QPEQRPSAEEVHL 265 (269)
T ss_pred ChHHHHHHHHHh-c-CcccCCCHHHHHH
Confidence 788999999998 7 8999999999974
No 360
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=7.3e-38 Score=267.46 Aligned_cols=233 Identities=25% Similarity=0.376 Sum_probs=180.5
Q ss_pred CcceeeeeecCCcceEEEEEEEc----cCCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCC-CCcE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHK----QTLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKP-SGEV 128 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~----~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~ 128 (300)
..|++.+.||+|+||.||++.+. .+++.+|+|.++..... ..+.+|+.+++.++|+||+++++++... ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 46788899999999999999965 34789999998765442 3457799999999999999999987652 2368
Q ss_pred EEEEeccCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcccee---------
Q 040812 129 SILMEYMDAGSLEIYVKSRG-RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSC--------- 198 (300)
Q Consensus 129 ~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~--------- 198 (300)
++||||+++++|.+++.... .+++..+..++.|++.||.|||+.|++|+||||+||+++.++...+++++
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 163 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDK 163 (284)
T ss_pred EEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccccCC
Confidence 99999999999999997654 58999999999999999999999999999999999999987554333221
Q ss_pred -------------eccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCc-----------hHHHHHHHHh
Q 040812 199 -------------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEP-----------DFLSLMLAIC 254 (300)
Q Consensus 199 -------------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~-----------~~~~~~~~~~ 254 (300)
.|.+||... +..++.++|||||||++|||+||..||....... ..........
T Consensus 164 ~~~~~~~~~~~~~~~~~Pe~~~---~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (284)
T cd05038 164 DYYYVKEPGESPIFWYAPECLR---TSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLK 240 (284)
T ss_pred cceeccCCCCCcccccCcHHHc---cCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHH
Confidence 133343332 3456778999999999999999999986532211 0111111122
Q ss_pred hCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 255 FREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 255 ~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
.......+..++.++.+++.+||.. ||++|||+.++++
T Consensus 241 ~~~~~~~~~~~~~~~~~li~~cl~~-~p~~Rpt~~ei~~ 278 (284)
T cd05038 241 EGERLPRPPSCPDEVYDLMKLCWEA-EPQDRPSFADLIL 278 (284)
T ss_pred cCCcCCCCccCCHHHHHHHHHHhcc-ChhhCCCHHHHHH
Confidence 2233344556778999999999999 9999999999975
No 361
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1.1e-37 Score=294.14 Aligned_cols=133 Identities=27% Similarity=0.454 Sum_probs=119.5
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEE
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSI 130 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~l 130 (300)
+++|++++.||+|+||.||+|.+..+++.||+|+++..... ..+..|+.++..++|+||+++++++.... ..|+
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~-~~~l 81 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSAN-NVYL 81 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECC-EEEE
Confidence 57899999999999999999999999999999999754322 23456899999999999999999887654 8999
Q ss_pred EEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCC
Q 040812 131 LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEK 189 (300)
Q Consensus 131 v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~ 189 (300)
||||+.+++|.+++...+.+++..++.++.||+.||.|||.+||+||||||+|||++.+
T Consensus 82 VmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~ 140 (669)
T cd05610 82 VMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNE 140 (669)
T ss_pred EEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCC
Confidence 99999999999999887789999999999999999999999999999999999999753
No 362
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-38 Score=280.93 Aligned_cols=236 Identities=25% Similarity=0.414 Sum_probs=193.0
Q ss_pred CCCcce-eeeeecCCcceEEEEEEEccCCeEEEEEEeecCC------CCCCCHHHHHHHHhcCCCceeEeceeeeCCC-C
Q 040812 55 GLSQLE-KLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDR------GTPPNPQELNILRQTNSPYIVKCHQIFTKPS-G 126 (300)
Q Consensus 55 ~~~~y~-~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~ 126 (300)
+.++|- ....||+|+|-+||+|.+..+|..||--.++.+. ....+..|+.+|+.|+|+||++++++|.+.. .
T Consensus 37 p~gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~ 116 (632)
T KOG0584|consen 37 PTGRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNK 116 (632)
T ss_pred CCCceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCc
Confidence 344443 3467999999999999999999998865544322 2234567999999999999999999998764 2
Q ss_pred cEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCC--ccccCCCCCceeecCC-CCCCcc--------
Q 040812 127 EVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRN--IVHRDIKPANVLINEK-MEHPCG-------- 195 (300)
Q Consensus 127 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--i~H~Dlkp~Nill~~~-~~~~~~-------- 195 (300)
.+-+|+|++..|+|..|+++.++++.+.++.|++||+.||.|||++. |+|||||.+||+|+.+ |..++|
T Consensus 117 ~in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~ 196 (632)
T KOG0584|consen 117 TINFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLL 196 (632)
T ss_pred eeeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHh
Confidence 47899999999999999999999999999999999999999999985 9999999999999865 333333
Q ss_pred ---------ceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCC-CCCCC
Q 040812 196 ---------YSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPS-LPECS 265 (300)
Q Consensus 196 ---------~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 265 (300)
++.-+++||..+ ..|...+||||||+.|.||+|+..||.+.... .++++.+..+..|. +...-
T Consensus 197 r~s~aksvIGTPEFMAPEmYE----E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~---AQIYKKV~SGiKP~sl~kV~ 269 (632)
T KOG0584|consen 197 RKSHAKSVIGTPEFMAPEMYE----ENYNELVDVYAFGMCMLEMVTSEYPYSECTNP---AQIYKKVTSGIKPAALSKVK 269 (632)
T ss_pred hccccceeccCccccChHHHh----hhcchhhhhhhhhHHHHHHHhccCChhhhCCH---HHHHHHHHcCCCHHHhhccC
Confidence 456678888776 34677999999999999999999999876544 35566666666553 44445
Q ss_pred ChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 266 SEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 266 ~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
.+++++||.+||.. .++|+|+.|+|+||||..
T Consensus 270 dPevr~fIekCl~~--~~~R~sa~eLL~d~Ff~~ 301 (632)
T KOG0584|consen 270 DPEVREFIEKCLAT--KSERLSAKELLKDPFFDE 301 (632)
T ss_pred CHHHHHHHHHHhcC--chhccCHHHHhhChhhcc
Confidence 78999999999976 789999999999999975
No 363
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-38 Score=273.52 Aligned_cols=233 Identities=21% Similarity=0.300 Sum_probs=184.7
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEE
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv 131 (300)
+.+...+.++||+|.||.|.+|.-.. +..||+|.++.+... ..|..|+++|.+++||||++++++|..++ .+|++
T Consensus 536 PRs~L~~~ekiGeGqFGEVhLCeveg-~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~De-PicmI 613 (807)
T KOG1094|consen 536 PRSRLRFKEKIGEGQFGEVHLCEVEG-PLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDD-PLCMI 613 (807)
T ss_pred chhheehhhhhcCcccceeEEEEecC-ceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCC-chHHH
Confidence 34567788999999999999999875 689999999865433 45678999999999999999999999876 89999
Q ss_pred EeccCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcccee-----------
Q 040812 132 MEYMDAGSLEIYVKSRG--RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSC----------- 198 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~----------- 198 (300)
+||+++|+|.+++.... .........|+.||++|++||.+.+++||||.+.|+|++.+...++..++
T Consensus 614 ~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy 693 (807)
T KOG1094|consen 614 TEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYY 693 (807)
T ss_pred HHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCce
Confidence 99999999999998763 23445566799999999999999999999999999999998776554432
Q ss_pred ----------eccccccccccCCCCCCchhhHHHHHHHHHHHH--hCCCCCCCCCCCchHHHHHHHH---hhCCCCCCCC
Q 040812 199 ----------LYESGEARHRKHGGYNGFAADIWSFGVTMMELY--MGYYPFLEPGQEPDFLSLMLAI---CFREPPSLPE 263 (300)
Q Consensus 199 ----------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ell--tg~~pf~~~~~~~~~~~~~~~~---~~~~~~~~~~ 263 (300)
.|+++|+.. -+.++.++|+|+||+++||++ +.+.||....+++...+.-.-. ....-+..|.
T Consensus 694 ~vqgr~vlpiRwmawEsil---lgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~ 770 (807)
T KOG1094|consen 694 RVQGRAVLPIRWMAWESIL---LGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPP 770 (807)
T ss_pred eeecceeeeeeehhHHHHH---hccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCC
Confidence 233444333 345678999999999999996 5899997765543332221111 1112345677
Q ss_pred CCChHHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 264 CSSEKFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 264 ~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
.++.++.++|.+||.. |-++||+++++..
T Consensus 771 ~cp~~lyelml~Cw~~-es~~RPsFe~lh~ 799 (807)
T KOG1094|consen 771 ACPQGLYELMLRCWRR-ESEQRPSFEQLHL 799 (807)
T ss_pred cCcHHHHHHHHHHhch-hhhcCCCHHHHHH
Confidence 8899999999999999 9999999999854
No 364
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.2e-38 Score=297.68 Aligned_cols=236 Identities=28% Similarity=0.432 Sum_probs=181.9
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC---CCHHHHHHHHhcCCCceeEeceeeeC---------
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP---PNPQELNILRQTNSPYIVKCHQIFTK--------- 123 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~~~E~~~l~~l~h~niv~~~~~~~~--------- 123 (300)
+.+|+.++.||+||||.||+++++-+|+.||||.+....... ...+|+..+.+++|||||+++..|..
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~e 557 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLE 557 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccc
Confidence 456788899999999999999999999999999987654222 23579999999999999998763200
Q ss_pred ----------------------------------------------C---------------------------------
Q 040812 124 ----------------------------------------------P--------------------------------- 124 (300)
Q Consensus 124 ----------------------------------------------~--------------------------------- 124 (300)
.
T Consensus 558 i~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e 637 (1351)
T KOG1035|consen 558 IVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSE 637 (1351)
T ss_pred ccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccC
Confidence 0
Q ss_pred ----------------------C--------CcEEEEEeccCCCCHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHhHhCC
Q 040812 125 ----------------------S--------GEVSILMEYMDAGSLEIYVKSRGRL-SEDIICTISRQVLKGLFYMHSRN 173 (300)
Q Consensus 125 ----------------------~--------~~~~lv~e~~~~~~L~~~l~~~~~l-~~~~~~~i~~qi~~~l~~lH~~~ 173 (300)
. -.+||=||||+..+|.+++.++... ....++.++++|+.||.|+|++|
T Consensus 638 ~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~g 717 (1351)
T KOG1035|consen 638 GSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQG 717 (1351)
T ss_pred CccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCc
Confidence 0 1268899999997777777665433 47889999999999999999999
Q ss_pred ccccCCCCCceeecCCCCCCcc-------------------------------------ceeeccccccccccCCCCCCc
Q 040812 174 IVHRDIKPANVLINEKMEHPCG-------------------------------------YSCLYESGEARHRKHGGYNGF 216 (300)
Q Consensus 174 i~H~Dlkp~Nill~~~~~~~~~-------------------------------------~~~~~~~~~~~~~~~~~~~~~ 216 (300)
|+||||||.||+++++...++| ++.+|.+||.........|+.
T Consensus 718 iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~ 797 (1351)
T KOG1035|consen 718 IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNS 797 (1351)
T ss_pred eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccc
Confidence 9999999999999976544333 356677777776655556888
Q ss_pred hhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCC---CCCCCChHHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 217 AADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPS---LPECSSEKFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 217 ~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
|+||||||||++||+ .||.- ..+...++.....+..|. +....-+.-+.+|.+|++. ||++||||.|+|+
T Consensus 798 KiDmYSLGIVlFEM~---yPF~T---sMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~h-dP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 798 KIDMYSLGIVLFEML---YPFGT---SMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSH-DPSKRPTATELLN 870 (1351)
T ss_pred hhhhHHHHHHHHHHh---ccCCc---hHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcC-CCccCCCHHHHhh
Confidence 999999999999999 45742 333344444433222222 2333445678999999999 9999999999999
Q ss_pred CCCCC
Q 040812 294 HPFLA 298 (300)
Q Consensus 294 hpw~~ 298 (300)
+.||-
T Consensus 871 s~llp 875 (1351)
T KOG1035|consen 871 SELLP 875 (1351)
T ss_pred ccCCC
Confidence 99985
No 365
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=3.5e-37 Score=266.12 Aligned_cols=230 Identities=23% Similarity=0.311 Sum_probs=178.4
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCe----EEEEEEeecCCCCC---CCHHHHHHHHhcCCCceeEeceeeeCCCCc
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLA----LYALKVMQCDRGTP---PNPQELNILRQTNSPYIVKCHQIFTKPSGE 127 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vaiK~~~~~~~~~---~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 127 (300)
..++|+..+.||+|+||.||+|.+..++. .+|+|.+....... .+.+|+.+++.++|+||+++++++... .
T Consensus 5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~--~ 82 (303)
T cd05110 5 KETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP--T 82 (303)
T ss_pred chhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC--C
Confidence 34678899999999999999999987765 46888876543321 345789999999999999999988653 5
Q ss_pred EEEEEeccCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcccee--------
Q 040812 128 VSILMEYMDAGSLEIYVKSRG-RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSC-------- 198 (300)
Q Consensus 128 ~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~-------- 198 (300)
.++++||+++|+|.+++.... .+++..+..++.|++.||.|||++||+|+||||+||+++.++..++.+++
T Consensus 83 ~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~ 162 (303)
T cd05110 83 IQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGD 162 (303)
T ss_pred ceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccCc
Confidence 679999999999999987643 58999999999999999999999999999999999999876554332221
Q ss_pred -------------eccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCC
Q 040812 199 -------------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPEC 264 (300)
Q Consensus 199 -------------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (300)
.|.+||.. .+..++.++|||||||++|||+| |..||..... . ..............+..
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~---~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~-~---~~~~~~~~~~~~~~~~~ 235 (303)
T cd05110 163 EKEYNADGGKMPIKWMALECI---HYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT-R---EIPDLLEKGERLPQPPI 235 (303)
T ss_pred ccccccCCCccccccCCHHHh---ccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH-H---HHHHHHHCCCCCCCCCC
Confidence 23333332 24556779999999999999997 8999965322 1 11122222333444566
Q ss_pred CChHHHHHHHHHhccCCCCCCCCHHHHhcC
Q 040812 265 SSEKFRDFIRCCLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 265 ~~~~l~~li~~~l~~~dp~~Rpt~~~~l~h 294 (300)
.+..+.+++..||.. +|++||++.++++.
T Consensus 236 ~~~~~~~li~~c~~~-~p~~Rp~~~~l~~~ 264 (303)
T cd05110 236 CTIDVYMVMVKCWMI-DADSRPKFKELAAE 264 (303)
T ss_pred CCHHHHHHHHHHcCC-ChhhCcCHHHHHHH
Confidence 788999999999999 99999999998753
No 366
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-38 Score=275.10 Aligned_cols=229 Identities=20% Similarity=0.299 Sum_probs=190.2
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
...+...-.+||-|.||.||.|.|++..-.||||.++.+... ..|+.|+.+|+.++|||+|+++|+|..+. .+|||.|
T Consensus 265 eRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~Ep-PFYIiTE 343 (1157)
T KOG4278|consen 265 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEP-PFYIITE 343 (1157)
T ss_pred cchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCC-CeEEEEe
Confidence 344566778999999999999999999999999999876543 56788999999999999999999999876 8999999
Q ss_pred ccCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcccee-------------
Q 040812 134 YMDAGSLEIYVKSRG--RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSC------------- 198 (300)
Q Consensus 134 ~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~------------- 198 (300)
||..|+|.+|++... .++....+.++.||.+|+.||..+++|||||..+|+|+.++...++.+++
T Consensus 344 fM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAH 423 (1157)
T KOG4278|consen 344 FMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAH 423 (1157)
T ss_pred cccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCCceecc
Confidence 999999999998754 47777888999999999999999999999999999999988655433222
Q ss_pred -------eccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHH
Q 040812 199 -------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFR 270 (300)
Q Consensus 199 -------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (300)
.|.+||.... +.++.|+|||+|||+|||+.| |..||.+.+- -+++.-...+....-|+.+++.+.
T Consensus 424 AGAKFPIKWTAPEsLAy---NtFSiKSDVWAFGVLLWEIATYGMsPYPGidl----SqVY~LLEkgyRM~~PeGCPpkVY 496 (1157)
T KOG4278|consen 424 AGAKFPIKWTAPESLAY---NTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----SQVYGLLEKGYRMDGPEGCPPKVY 496 (1157)
T ss_pred cCccCcccccCcccccc---cccccchhhHHHHHHHHHHHhcCCCCCCCccH----HHHHHHHhccccccCCCCCCHHHH
Confidence 2455555442 346779999999999999987 8999965432 223333345677788999999999
Q ss_pred HHHHHHhccCCCCCCCCHHHHh
Q 040812 271 DFIRCCLQKGDPSKRWTASQLL 292 (300)
Q Consensus 271 ~li~~~l~~~dp~~Rpt~~~~l 292 (300)
+||..||+. +|++||++.|+-
T Consensus 497 eLMraCW~W-sPsDRPsFaeiH 517 (1157)
T KOG4278|consen 497 ELMRACWNW-SPSDRPSFAEIH 517 (1157)
T ss_pred HHHHHHhcC-CcccCccHHHHH
Confidence 999999999 999999999874
No 367
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=9.3e-37 Score=258.86 Aligned_cols=228 Identities=28% Similarity=0.401 Sum_probs=174.9
Q ss_pred cceeeeeecCCcceEEEEEEEcc-CCeEEEEEEeecCCCCC------------CCHHHHHHHHh-cCCCceeEeceeeeC
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQ-TLALYALKVMQCDRGTP------------PNPQELNILRQ-TNSPYIVKCHQIFTK 123 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~------------~~~~E~~~l~~-l~h~niv~~~~~~~~ 123 (300)
.|++.+.||+|+||.||+|.+.. +++.+|+|.+....... ...+|+.++.+ ++|+||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47888999999999999999987 78899999886432111 12457777764 799999999999877
Q ss_pred CCCcEEEEEeccCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCceeecCCCCCCccce-
Q 040812 124 PSGEVSILMEYMDAGSLEIYVKS----RGRLSEDIICTISRQVLKGLFYMHS-RNIVHRDIKPANVLINEKMEHPCGYS- 197 (300)
Q Consensus 124 ~~~~~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~~l~~lH~-~~i~H~Dlkp~Nill~~~~~~~~~~~- 197 (300)
.. ..++||||+++++|.+++.. ...+++..++.++.|++.||.|||+ .|++|+||||+||+++.++...+..+
T Consensus 81 ~~-~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg 159 (269)
T cd08528 81 ND-RLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFG 159 (269)
T ss_pred CC-eEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEeccc
Confidence 54 89999999999999988743 3468999999999999999999996 78999999999999988765433222
Q ss_pred -----------------eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCC
Q 040812 198 -----------------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPS 260 (300)
Q Consensus 198 -----------------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 260 (300)
..|.+||... ++.++.++||||||+++|+|++|+.||...... .............
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~---~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~ 232 (269)
T cd08528 160 LAKQKQPESKLTSVVGTILYSCPEIVK---NEPYGEKADVWAFGCILYQMCTLQPPFYSTNML----SLATKIVEAVYEP 232 (269)
T ss_pred ceeecccccccccccCcccCcChhhhc---CCCCchHHHHHHHHHHHHHHHhCCCcccccCHH----HHHHHHhhccCCc
Confidence 2234444432 445678999999999999999999999643221 2222222222222
Q ss_pred C-CCCCChHHHHHHHHHhccCCCCCCCCHHHHhcC
Q 040812 261 L-PECSSEKFRDFIRCCLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 261 ~-~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~h 294 (300)
. ....++.+.++|.+||+. ||++||++.|+..+
T Consensus 233 ~~~~~~~~~l~~li~~cl~~-~p~~Rp~~~e~~~~ 266 (269)
T cd08528 233 LPEGMYSEDVTDVITSCLTP-DAEARPDIIQVSAM 266 (269)
T ss_pred CCcccCCHHHHHHHHHHCCC-CCccCCCHHHHHHH
Confidence 2 235788999999999999 99999999998754
No 368
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=5.8e-37 Score=259.32 Aligned_cols=222 Identities=19% Similarity=0.299 Sum_probs=166.9
Q ss_pred eeecCCcceEEEEEEEcc------------CCeEEEEEEeecCCCC--CCCHHHHHHHHhcCCCceeEeceeeeCCCCcE
Q 040812 63 QVLGQGNGGTVFKVRHKQ------------TLALYALKVMQCDRGT--PPNPQELNILRQTNSPYIVKCHQIFTKPSGEV 128 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~------------~~~~vaiK~~~~~~~~--~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 128 (300)
+.||+|+||.||+|.... ....+++|++...... ..+.+|+.+++.++||||+++++++.... ..
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~-~~ 79 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDV-EN 79 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC-CC
Confidence 368999999999998542 2336888987543322 13456889999999999999999987654 78
Q ss_pred EEEEeccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCC----------Ccc--
Q 040812 129 SILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEH----------PCG-- 195 (300)
Q Consensus 129 ~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~----------~~~-- 195 (300)
++||||+++++|..++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.++.. ++|
T Consensus 80 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~ 159 (262)
T cd05077 80 IMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIP 159 (262)
T ss_pred EEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCC
Confidence 999999999999998875 3568999999999999999999999999999999999999765421 111
Q ss_pred ----------ceeeccccccccccCCCCCCchhhHHHHHHHHHHHH-hCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCC
Q 040812 196 ----------YSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPEC 264 (300)
Q Consensus 196 ----------~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ell-tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (300)
++..|.+||... .+..++.++|||||||++|||+ +|..||...... ..... . .........
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~-~~~~~----~-~~~~~~~~~ 231 (262)
T cd05077 160 ITVLSRQECVERIPWIAPECVE--DSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLA-EKERF----Y-EGQCMLVTP 231 (262)
T ss_pred ccccCcccccccccccChhhhc--CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchh-HHHHH----H-hcCccCCCC
Confidence 122355565432 1345677999999999999997 588888643221 11111 1 111122233
Q ss_pred CChHHHHHHHHHhccCCCCCCCCHHHHhcC
Q 040812 265 SSEKFRDFIRCCLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 265 ~~~~l~~li~~~l~~~dp~~Rpt~~~~l~h 294 (300)
.++++.++|.+||+. ||++||++.+++++
T Consensus 232 ~~~~~~~li~~cl~~-dp~~Rp~~~~il~~ 260 (262)
T cd05077 232 SCKELADLMTHCMNY-DPNQRPFFRAIMRD 260 (262)
T ss_pred ChHHHHHHHHHHcCC-ChhhCcCHHHHHHh
Confidence 467899999999999 99999999999875
No 369
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-37 Score=256.05 Aligned_cols=242 Identities=27% Similarity=0.438 Sum_probs=198.5
Q ss_pred CCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC-----CCHHHHHHHHhc-CCCceeEeceeeeCCCCc
Q 040812 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP-----PNPQELNILRQT-NSPYIVKCHQIFTKPSGE 127 (300)
Q Consensus 54 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 127 (300)
.++.+|.++++||+|+|++|-+++.++|.+.||+|+++++-..+ ...-|-.+..+. +||.+|-++.+|..+. .
T Consensus 247 l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtes-r 325 (593)
T KOG0695|consen 247 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTES-R 325 (593)
T ss_pred cccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccc-e
Confidence 46789999999999999999999999999999999998654332 224466666554 7999999999999876 8
Q ss_pred EEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCC--------------
Q 040812 128 VSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHP-------------- 193 (300)
Q Consensus 128 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~-------------- 193 (300)
+++|.||++||+|.-.+++.+++++..++.+...|..||.|||++||+.||||.+|+|++..+..+
T Consensus 326 lffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~g 405 (593)
T KOG0695|consen 326 LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPG 405 (593)
T ss_pred EEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCCCC
Confidence 999999999999998898888999999999999999999999999999999999999999876542
Q ss_pred -----ccceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC---CCCCchHHHHHHHHhhCCCCCCCCCC
Q 040812 194 -----CGYSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLE---PGQEPDFLSLMLAICFREPPSLPECS 265 (300)
Q Consensus 194 -----~~~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (300)
+.++..|.+||... |..|+.++|+|+|||+|+||+.|+.||.- .+.+.+....+.++.......+|...
T Consensus 406 d~tstfcgtpnyiapeilr---geeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiriprsl 482 (593)
T KOG0695|consen 406 DTTSTFCGTPNYIAPEILR---GEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPRSL 482 (593)
T ss_pred cccccccCCCcccchhhhc---ccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhccccccee
Confidence 22345566666654 77899999999999999999999999952 22233333333444445556667777
Q ss_pred ChHHHHHHHHHhccCCCCCCCC------HHHHhcCCCCCCC
Q 040812 266 SEKFRDFIRCCLQKGDPSKRWT------ASQLLSHPFLADA 300 (300)
Q Consensus 266 ~~~l~~li~~~l~~~dp~~Rpt------~~~~l~hpw~~~~ 300 (300)
+-....+++..|.+ ||.+|.. ..++..|+||+.+
T Consensus 483 svkas~vlkgflnk-dp~erlgc~~~~g~~dik~h~ffr~i 522 (593)
T KOG0695|consen 483 SVKASHVLKGFLNK-DPKERLGCRPQTGFSDIKSHAFFRSI 522 (593)
T ss_pred ehhhHHHHHHhhcC-CcHHhcCCCcccchhhhhcchhhhhC
Confidence 77888899999999 9999974 7899999999853
No 370
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-39 Score=271.55 Aligned_cols=240 Identities=25% Similarity=0.358 Sum_probs=193.0
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC---------CCHHHHHHHHhcCCCceeEeceeeeCCCCc
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP---------PNPQELNILRQTNSPYIVKCHQIFTKPSGE 127 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---------~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 127 (300)
++|-++..||+|||+.||+|.+....++||+|+...+.... ...+|..+.+.+.||.||++|++|.-+...
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds 542 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS 542 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc
Confidence 45778899999999999999999999999999976543322 235799999999999999999999877778
Q ss_pred EEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhC--CccccCCCCCceeecCCCCC-------------
Q 040812 128 VSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSR--NIVHRDIKPANVLINEKMEH------------- 192 (300)
Q Consensus 128 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~--~i~H~Dlkp~Nill~~~~~~------------- 192 (300)
+|.|+|||+|.+|.-|++....+++.+++.|+.||+.||.||.+. -|+|-||||.|||+.....+
T Consensus 543 FCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKI 622 (775)
T KOG1151|consen 543 FCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKI 622 (775)
T ss_pred ceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhh
Confidence 999999999999999999998999999999999999999999976 49999999999999654221
Q ss_pred ----------------CccceeeccccccccccC-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhh
Q 040812 193 ----------------PCGYSCLYESGEARHRKH-GGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICF 255 (300)
Q Consensus 193 ----------------~~~~~~~~~~~~~~~~~~-~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~ 255 (300)
...++..|.+||...... ....+.++||||+|||+|..+.|+.||.......++++.-. +..
T Consensus 623 MdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNT-Ilk 701 (775)
T KOG1151|consen 623 MDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENT-ILK 701 (775)
T ss_pred ccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhc-hhc
Confidence 223455566777655431 22356799999999999999999999987655444433221 222
Q ss_pred CCCCCCC--CCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCC
Q 040812 256 REPPSLP--ECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLA 298 (300)
Q Consensus 256 ~~~~~~~--~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~ 298 (300)
.....+| ..++.+.++||.+||.+ --++|..+.++.+||||.
T Consensus 702 AtEVqFP~KPvVsseAkaFIRRCLaY-RKeDR~DV~qLA~dpyll 745 (775)
T KOG1151|consen 702 ATEVQFPPKPVVSSEAKAFIRRCLAY-RKEDRIDVQQLACDPYLL 745 (775)
T ss_pred ceeccCCCCCccCHHHHHHHHHHHHh-hhhhhhhHHHHccCcccc
Confidence 2222233 24788999999999999 889999999999999984
No 371
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-38 Score=280.74 Aligned_cols=233 Identities=21% Similarity=0.311 Sum_probs=193.8
Q ss_pred cCCCCcceeeeeecCCcceEEEEEEEcc---CCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCC
Q 040812 53 IDGLSQLEKLQVLGQGNGGTVFKVRHKQ---TLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSG 126 (300)
Q Consensus 53 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 126 (300)
+...++..+.++||+|.||.|++|.|.. +...||||+++.+... ++|++|+.+|.+|+|+|++++||+..+ .
T Consensus 106 lIpee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-q- 183 (1039)
T KOG0199|consen 106 LIPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-Q- 183 (1039)
T ss_pred eccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-c-
Confidence 3455667888999999999999999974 3357999999876544 567899999999999999999999876 3
Q ss_pred cEEEEEeccCCCCHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccceee-----
Q 040812 127 EVSILMEYMDAGSLEIYVKS--RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCL----- 199 (300)
Q Consensus 127 ~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~~----- 199 (300)
...+|||+++.|+|.+.+.+ ...|.......++.||+.|+.||..+++|||||..+|+|+......+++++++
T Consensus 184 p~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg 263 (1039)
T KOG0199|consen 184 PAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALG 263 (1039)
T ss_pred hhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccC
Confidence 68899999999999999987 34588899999999999999999999999999999999998766555544443
Q ss_pred -----------------ccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCC
Q 040812 200 -----------------YESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSL 261 (300)
Q Consensus 200 -----------------~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 261 (300)
|.+||+.. ...++.++|||+|||++|||+| |+.||.+... ..+++.+..+.....
T Consensus 264 ~ned~Yvm~p~rkvPfAWCaPEsLr---h~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g----~qIL~~iD~~erLpR 336 (1039)
T KOG0199|consen 264 ENEDMYVMAPQRKVPFAWCAPESLR---HRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG----IQILKNIDAGERLPR 336 (1039)
T ss_pred CCCcceEecCCCcCcccccCHhHhc---cccccccchhhhhhhhHHhhhccCCCCCCCCCH----HHHHHhccccccCCC
Confidence 44444443 4456779999999999999998 8999976443 355555666777888
Q ss_pred CCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCC
Q 040812 262 PECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHP 295 (300)
Q Consensus 262 ~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hp 295 (300)
|..+++++.+++..||.. +|.+|||+..|...-
T Consensus 337 Pk~csedIY~imk~cWah-~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 337 PKYCSEDIYQIMKNCWAH-NPADRPTFSAIREDL 369 (1039)
T ss_pred CCCChHHHHHHHHHhccC-CccccccHHHHHHhH
Confidence 999999999999999999 999999999986443
No 372
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=5.4e-37 Score=260.81 Aligned_cols=228 Identities=20% Similarity=0.324 Sum_probs=173.6
Q ss_pred ceeeeeecCCcceEEEEEEEc---cCCeEEEEEEeecCCCCC----CCHHHHHHHHhcCCCceeEeceeeeCCC--C---
Q 040812 59 LEKLQVLGQGNGGTVFKVRHK---QTLALYALKVMQCDRGTP----PNPQELNILRQTNSPYIVKCHQIFTKPS--G--- 126 (300)
Q Consensus 59 y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~----~~~~E~~~l~~l~h~niv~~~~~~~~~~--~--- 126 (300)
|.+.+.||+|+||.||+|.+. .+++.||+|++..+.... .+.+|+.++++++||||+++++++.... +
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 567789999999999999865 357899999987543322 2457999999999999999999875432 1
Q ss_pred cEEEEEeccCCCCHHHHHHhC------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccceee-
Q 040812 127 EVSILMEYMDAGSLEIYVKSR------GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCL- 199 (300)
Q Consensus 127 ~~~lv~e~~~~~~L~~~l~~~------~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~~- 199 (300)
..+++++|+.+|+|.+++... ..+++..+..++.|++.||.|||+.||+||||||+||+++.++...+.+++.
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~ 160 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLS 160 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECccccc
Confidence 247899999999999887532 2478899999999999999999999999999999999998776544333221
Q ss_pred --------------------ccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCC
Q 040812 200 --------------------YESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREP 258 (300)
Q Consensus 200 --------------------~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 258 (300)
|.+||. ..+..++.++|||||||++|+|++ |..||..... .+....+.....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~---~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~----~~~~~~~~~~~~ 233 (273)
T cd05074 161 KKIYSGDYYRQGCASKLPVKWLALES---LADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN----SEIYNYLIKGNR 233 (273)
T ss_pred ccccCCcceecCCCccCchhhcCHhH---HhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH----HHHHHHHHcCCc
Confidence 112222 123445678999999999999999 8899864432 122222223333
Q ss_pred CCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcC
Q 040812 259 PSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 259 ~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~h 294 (300)
...+...++.+.+++.+||.. +|++||++.+++++
T Consensus 234 ~~~~~~~~~~~~~l~~~~l~~-~p~~Rps~~~~~~~ 268 (273)
T cd05074 234 LKQPPDCLEDVYELMCQCWSP-EPKCRPSFQHLRDQ 268 (273)
T ss_pred CCCCCCCCHHHHHHHHHHcCC-ChhhCcCHHHHHHH
Confidence 444556788999999999999 99999999999863
No 373
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1e-36 Score=258.71 Aligned_cols=228 Identities=19% Similarity=0.288 Sum_probs=166.2
Q ss_pred eeecCCcceEEEEEEEccC--CeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEeccCC
Q 040812 63 QVLGQGNGGTVFKVRHKQT--LALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDA 137 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~--~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~ 137 (300)
+.||+|+||.||++....+ ...+++|.+...... ..+.+|+.+++.++||||+++++.+.... ..|+||||+++
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~-~~~lv~e~~~~ 79 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAI-PYLLVFEYCEL 79 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCC-ccEEEEecCCC
Confidence 3599999999999976433 345667776543322 23467889999999999999999988754 89999999999
Q ss_pred CCHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce----------------
Q 040812 138 GSLEIYVKSR----GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS---------------- 197 (300)
Q Consensus 138 ~~L~~~l~~~----~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~---------------- 197 (300)
|+|.+++... ..+++..++.++.||+.||.|||+++++||||||+|||++.++...+.++
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 159 (268)
T cd05086 80 GDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETED 159 (268)
T ss_pred CcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhccc
Confidence 9999999753 24677788899999999999999999999999999999987654432221
Q ss_pred -----eeccccccccccC----CCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHh-hCCCCCCCCCCC
Q 040812 198 -----CLYESGEARHRKH----GGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAIC-FREPPSLPECSS 266 (300)
Q Consensus 198 -----~~~~~~~~~~~~~----~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 266 (300)
..|.+||...... ...++.++|||||||++|||++ |..||................. ....+..+...+
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (268)
T cd05086 160 DKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYS 239 (268)
T ss_pred CCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCc
Confidence 2345565543211 1234678999999999999997 5778854333221211111111 111233445578
Q ss_pred hHHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 267 EKFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 267 ~~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
+.+.+++..|| . +|++||+++++++
T Consensus 240 ~~~~~l~~~c~-~-~P~~Rp~~~~i~~ 264 (268)
T cd05086 240 ERWYEVLQFCW-L-SPEKRATAEEVHR 264 (268)
T ss_pred HHHHHHHHHHh-h-CcccCCCHHHHHH
Confidence 89999999999 6 8999999999975
No 374
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=6.1e-38 Score=245.46 Aligned_cols=238 Identities=23% Similarity=0.369 Sum_probs=184.9
Q ss_pred CCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHhcC-CCceeEeceeeeCCC-CcEEEE
Q 040812 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTN-SPYIVKCHQIFTKPS-GEVSIL 131 (300)
Q Consensus 54 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~-~~~~lv 131 (300)
...++|++.+++|+|-|+.||.|....+++.++||+++.-.. ....+|+.+|+.+. ||||+.++++..++. ....++
T Consensus 35 g~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkk-kKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi 113 (338)
T KOG0668|consen 35 GNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKK-KKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI 113 (338)
T ss_pred cccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHH-HHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence 367889999999999999999999999999999999975432 34578999999997 999999999987653 347899
Q ss_pred EeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCC----Cccceee--------
Q 040812 132 MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEH----PCGYSCL-------- 199 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~----~~~~~~~-------- 199 (300)
+||+++.+...+.. .++...++.++.+++.||.|+|+.||+|||+||.|++|+..... +-|..-.
T Consensus 114 FE~v~n~Dfk~ly~---tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYn 190 (338)
T KOG0668|consen 114 FEYVNNTDFKQLYP---TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN 190 (338)
T ss_pred hhhhccccHHHHhh---hhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCCceee
Confidence 99999877776654 58889999999999999999999999999999999999865321 1222222
Q ss_pred -------ccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhh-----------------
Q 040812 200 -------YESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICF----------------- 255 (300)
Q Consensus 200 -------~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~----------------- 255 (300)
+..||..-. -..+.++.|+|||||++..|+..+-||+...+..+.+.-+..+..
T Consensus 191 VRVASRyfKGPELLVd--y~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp 268 (338)
T KOG0668|consen 191 VRVASRYFKGPELLVD--YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDP 268 (338)
T ss_pred eeeehhhcCCchheee--chhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCCh
Confidence 233333322 134678999999999999999999999876655444332222110
Q ss_pred -------CC---------CCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCC
Q 040812 256 -------RE---------PPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLA 298 (300)
Q Consensus 256 -------~~---------~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~ 298 (300)
.. ...-....++++.||+.++|.. |-.+|+|+.|++.||||.
T Consensus 269 ~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrY-DHqeRlTakEam~HpyF~ 326 (338)
T KOG0668|consen 269 QFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRY-DHQERLTAKEAMAHPYFA 326 (338)
T ss_pred hHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhh-ccccccchHHHhcCchHH
Confidence 00 1111223468999999999999 999999999999999995
No 375
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-36 Score=259.01 Aligned_cols=132 Identities=29% Similarity=0.403 Sum_probs=112.9
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCC-CCCCHHHHHHHHhcC-----C---CceeEeceeeeCC-
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG-TPPNPQELNILRQTN-----S---PYIVKCHQIFTKP- 124 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l~-----h---~niv~~~~~~~~~- 124 (300)
.-++|.+.++||=|-|++||+|.+..+.+.||+|+.+.... ......||.+|++++ | ..||+|++.|...
T Consensus 76 ~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 76 NGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred cCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 44789999999999999999999999999999999986443 344578999999983 3 3699999998643
Q ss_pred --CCcEEEEEeccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCceeec
Q 040812 125 --SGEVSILMEYMDAGSLEIYVKSR--GRLSEDIICTISRQVLKGLFYMHS-RNIVHRDIKPANVLIN 187 (300)
Q Consensus 125 --~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~lH~-~~i~H~Dlkp~Nill~ 187 (300)
..++|||+|++ |.+|-.++... +.++...++.|++||+.||.|||. .||+|.||||+|||+.
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence 23699999999 55888888753 359999999999999999999995 6999999999999995
No 376
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-38 Score=285.14 Aligned_cols=230 Identities=26% Similarity=0.376 Sum_probs=194.0
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCC---eEEEEEEeecCC---CCCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEE
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTL---ALYALKVMQCDR---GTPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVS 129 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~---~~vaiK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 129 (300)
.+...+.++||.|.||.|++|+.+..+ ..||||.++... ....|+.|+.||-++.||||++|.|+....+ .++
T Consensus 628 ~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~-PvM 706 (996)
T KOG0196|consen 628 PSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSK-PVM 706 (996)
T ss_pred hhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCc-eeE
Confidence 345678899999999999999988655 479999998643 3456788999999999999999999988765 899
Q ss_pred EEEeccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccceee---------
Q 040812 130 ILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCL--------- 199 (300)
Q Consensus 130 lv~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~~--------- 199 (300)
||.|||++|+|..+++. .+.|+.-+..-+++.|++|++||-+.|++||||.++|||++.+..+++.++++
T Consensus 707 IiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~ 786 (996)
T KOG0196|consen 707 IITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 786 (996)
T ss_pred EEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecccCCC
Confidence 99999999999999986 46799999999999999999999999999999999999999887665544433
Q ss_pred -------------ccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCC
Q 040812 200 -------------YESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECS 265 (300)
Q Consensus 200 -------------~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (300)
|.+||+... ..++.+|||||+|++|||.++ |+.||.+..+. ..++.+..+.....|-.+
T Consensus 787 ~~ytt~GGKIPiRWTAPEAIa~---RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQ----dVIkaIe~gyRLPpPmDC 859 (996)
T KOG0196|consen 787 AAYTTLGGKIPIRWTAPEAIAY---RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ----DVIKAIEQGYRLPPPMDC 859 (996)
T ss_pred ccccccCCccceeecChhHhhh---cccCchhhccccceEEEEecccCCCcccccchH----HHHHHHHhccCCCCCCCC
Confidence 344444331 235679999999999999986 99999876543 556666677778888889
Q ss_pred ChHHHHHHHHHhccCCCCCCCCHHHHhcC
Q 040812 266 SEKFRDFIRCCLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 266 ~~~l~~li~~~l~~~dp~~Rpt~~~~l~h 294 (300)
+..+.+||..||++ |-.+||.+.+|+.+
T Consensus 860 P~aL~qLMldCWqk-dR~~RP~F~qiV~~ 887 (996)
T KOG0196|consen 860 PAALYQLMLDCWQK-DRNRRPKFAQIVST 887 (996)
T ss_pred cHHHHHHHHHHHHH-HhhcCCCHHHHHHH
Confidence 99999999999999 99999999998753
No 377
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=5.2e-36 Score=257.70 Aligned_cols=230 Identities=17% Similarity=0.163 Sum_probs=166.5
Q ss_pred CcceeeeeecCCcceEEEEEEEccC---CeEEEEEEeecCCCCCC-------------CHHHHHHHHhcCCCceeEecee
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQT---LALYALKVMQCDRGTPP-------------NPQELNILRQTNSPYIVKCHQI 120 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~~~~~-------------~~~E~~~l~~l~h~niv~~~~~ 120 (300)
++|++.+.||+|+||.||+|.+..+ +..+|+|+......... ...+...+..+.|+|+++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 5799999999999999999999877 67788886543221110 0112334556789999999987
Q ss_pred eeCCCC---cEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce
Q 040812 121 FTKPSG---EVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS 197 (300)
Q Consensus 121 ~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~ 197 (300)
...... ..+++++++.. ++.+.+......++..++.++.|++.||.|||+++|+||||||+|||++.++...+.++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DF 170 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLVE-NTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDY 170 (294)
T ss_pred eeEecCCceEEEEEEehhcc-CHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEc
Confidence 654332 35788888854 77777766555788999999999999999999999999999999999987654422221
Q ss_pred --------------------------eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHH-
Q 040812 198 --------------------------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLM- 250 (300)
Q Consensus 198 --------------------------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~- 250 (300)
..|.+|+. ..+..++.++|||||||++|||+||..||.............
T Consensus 171 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~---~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~ 247 (294)
T PHA02882 171 GIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDA---HNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAK 247 (294)
T ss_pred CCceeeccCCcccccccccccccCCCccccCHHH---hCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhH
Confidence 22333332 224557889999999999999999999997664433322211
Q ss_pred ----HHHhhCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 251 ----LAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 251 ----~~~~~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
..+. ... ......++.+.++++.|+.. +|++||+++++++
T Consensus 248 ~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~-~~~~rp~~~~l~~ 291 (294)
T PHA02882 248 CDFIKRLH-EGK-IKIKNANKFIYDFIECVTKL-SYEEKPDYDALIK 291 (294)
T ss_pred HHHHHHhh-hhh-hccCCCCHHHHHHHHHHHhC-CCCCCCCHHHHHH
Confidence 1111 111 12334678899999999999 9999999999875
No 378
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-37 Score=277.17 Aligned_cols=225 Identities=28% Similarity=0.384 Sum_probs=169.5
Q ss_pred ceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCC---CHHHHHHHHhcCCCceeEeceeeeCCC-----CcEEE
Q 040812 59 LEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPP---NPQELNILRQTNSPYIVKCHQIFTKPS-----GEVSI 130 (300)
Q Consensus 59 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~---~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~~~l 130 (300)
+..-+.||+|+||.||+++++++|+.||||.++....... ..+|+++|++++|+|||+++++-++.. ....+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 4556779999999999999999999999999987543332 256999999999999999999744322 13579
Q ss_pred EEeccCCCCHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCC-------CCc------
Q 040812 131 LMEYMDAGSLEIYVKSRG---RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKME-------HPC------ 194 (300)
Q Consensus 131 v~e~~~~~~L~~~l~~~~---~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~-------~~~------ 194 (300)
|||||.||+|...+++.. .+++.+.+.++..+..||.|||++||+||||||+||++..... +++
T Consensus 95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel 174 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAREL 174 (732)
T ss_pred EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccC
Confidence 999999999999998643 4999999999999999999999999999999999999865431 111
Q ss_pred ---------cceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCC--------
Q 040812 195 ---------GYSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFRE-------- 257 (300)
Q Consensus 195 ---------~~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~-------- 257 (300)
.++.-|-.|+..+. .++++..+|.|||||++|+++||..||..........+++..+..+.
T Consensus 175 ~d~s~~~S~vGT~~YLhPel~E~--q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~ 252 (732)
T KOG4250|consen 175 DDNSLFTSLVGTEEYLHPELYER--QKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGA 252 (732)
T ss_pred CCCCeeeeecCchhhcChHHHhh--ccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEee
Confidence 22333455555443 35788899999999999999999999976544433333333322111
Q ss_pred ------------CCCCCCCCCh----HHHHHHHHHhccCCCCCCC
Q 040812 258 ------------PPSLPECSSE----KFRDFIRCCLQKGDPSKRW 286 (300)
Q Consensus 258 ------------~~~~~~~~~~----~l~~li~~~l~~~dp~~Rp 286 (300)
..++|...+. .+-.|+..+|.. +|.+|.
T Consensus 253 ~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~-~~~~~~ 296 (732)
T KOG4250|consen 253 QEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEW-NPRKRG 296 (732)
T ss_pred ecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhh-hHHHhC
Confidence 1112333333 356788889988 999998
No 379
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2e-36 Score=275.06 Aligned_cols=242 Identities=32% Similarity=0.516 Sum_probs=199.3
Q ss_pred cCCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCC-HHHHHHHHhc-CCCceeEeceeeeCC----CC
Q 040812 53 IDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-PQELNILRQT-NSPYIVKCHQIFTKP----SG 126 (300)
Q Consensus 53 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~-~~E~~~l~~l-~h~niv~~~~~~~~~----~~ 126 (300)
-+..+.|++.+.||.|.||.||+++.+++++.+|+|+...+...+.. ..|.++++.+ .|||++.++++|... .+
T Consensus 15 pdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~D 94 (953)
T KOG0587|consen 15 PDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGD 94 (953)
T ss_pred CCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCC
Confidence 34566789999999999999999999999999999998766554433 4578888877 589999999987422 24
Q ss_pred cEEEEEeccCCCCHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCC------------
Q 040812 127 EVSILMEYMDAGSLEIYVKS--RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEH------------ 192 (300)
Q Consensus 127 ~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~------------ 192 (300)
.+|||||||.||+..++++. ..++.+..+..|++.++.|+.+||...++|||||-.|||++.++..
T Consensus 95 qLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQld 174 (953)
T KOG0587|consen 95 QLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 174 (953)
T ss_pred eEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeeee
Confidence 69999999999999999985 4579999999999999999999999999999999999999987653
Q ss_pred -------Cccceeecccccccccc--CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCC--
Q 040812 193 -------PCGYSCLYESGEARHRK--HGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL-- 261 (300)
Q Consensus 193 -------~~~~~~~~~~~~~~~~~--~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~-- 261 (300)
.+-++..|++||+.... ....|+..+|+||||++..||..|.+|+.+... +..+-.+..+.++.+
T Consensus 175 sT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHP----mraLF~IpRNPPPkLkr 250 (953)
T KOG0587|consen 175 STVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHP----MRALFLIPRNPPPKLKR 250 (953)
T ss_pred cccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcch----hhhhccCCCCCCccccc
Confidence 23457778999875432 234566789999999999999999999965433 233333444445543
Q ss_pred CCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 262 PECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 262 ~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
|..+++++.+||..||.+ |.++||+..++|+|||+.+
T Consensus 251 p~kWs~~FndFIs~cL~K-d~e~RP~~~~ll~hpFi~e 287 (953)
T KOG0587|consen 251 PKKWSKKFNDFISTCLVK-DYEQRPSTEELLKHPFITE 287 (953)
T ss_pred hhhHHHHHHHHHHHHHhh-ccccCcchhhhccCCcccc
Confidence 678899999999999999 9999999999999999864
No 380
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-38 Score=270.26 Aligned_cols=237 Identities=24% Similarity=0.368 Sum_probs=198.4
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCC-----HHHHHHHHhcCCCceeEeceeeeCCCCcEE
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-----PQELNILRQTNSPYIVKCHQIFTKPSGEVS 129 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~-----~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 129 (300)
.+++++++..||-|+||.|-+++.+.....+|+|++++.+..+.- ..|-++|...+.|.||++|..|.++. ++|
T Consensus 418 ~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~k-yvY 496 (732)
T KOG0614|consen 418 KLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSK-YVY 496 (732)
T ss_pred chhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccch-hhh
Confidence 467788899999999999999998876667999999876654332 45889999999999999999998865 999
Q ss_pred EEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCc---c-----------
Q 040812 130 ILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPC---G----------- 195 (300)
Q Consensus 130 lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~---~----------- 195 (300)
++||-|-||.|++.+.+++.|+...++.++..++.|+.|||++||++|||||+|++++.++..++ |
T Consensus 497 mLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KT 576 (732)
T KOG0614|consen 497 MLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKT 576 (732)
T ss_pred hhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccCCce
Confidence 99999999999999999999999999999999999999999999999999999999999876532 2
Q ss_pred ----ceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHH
Q 040812 196 ----YSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRD 271 (300)
Q Consensus 196 ----~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (300)
++.-|-+||... ...-..++|.||||+++|||+||.+||...++...+..++..+ ....+|..++....+
T Consensus 577 wTFcGTpEYVAPEIIL---nKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGi---d~i~~Pr~I~k~a~~ 650 (732)
T KOG0614|consen 577 WTFCGTPEYVAPEIIL---NKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGI---DKIEFPRRITKTATD 650 (732)
T ss_pred eeecCCcccccchhhh---ccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhh---hhhhcccccchhHHH
Confidence 234455555543 2334568999999999999999999998877655544444332 234567788899999
Q ss_pred HHHHHhccCCCCCCCC-----HHHHhcCCCCCC
Q 040812 272 FIRCCLQKGDPSKRWT-----ASQLLSHPFLAD 299 (300)
Q Consensus 272 li~~~l~~~dp~~Rpt-----~~~~l~hpw~~~ 299 (300)
+|.+++.. +|.+|.. +.+|.+|.||.+
T Consensus 651 Lik~LCr~-~P~ERLG~~~~gI~DIkkH~Wf~g 682 (732)
T KOG0614|consen 651 LIKKLCRD-NPTERLGYQKGGINDIKKHRWFEG 682 (732)
T ss_pred HHHHHHhc-CcHhhhccccCChHHHHhhhhhhc
Confidence 99999999 9999986 899999999975
No 381
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=4.9e-36 Score=295.88 Aligned_cols=227 Identities=20% Similarity=0.269 Sum_probs=174.5
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEeccCC
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDA 137 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~ 137 (300)
.+...+.||+|+||.||+|++..+++.||+|.+.... .....|+..+++++||||+++++++..+. ..|+||||+++
T Consensus 691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~l~~l~HpnIv~~~~~~~~~~-~~~lv~Ey~~~ 767 (968)
T PLN00113 691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVN--SIPSSEIADMGKLQHPNIVKLIGLCRSEK-GAYLIHEYIEG 767 (968)
T ss_pred hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCc--cccHHHHHHHhhCCCCCcceEEEEEEcCC-CCEEEEeCCCC
Confidence 3556678999999999999999889999999886432 23356899999999999999999998765 78999999999
Q ss_pred CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhH---hCCccccCCCCCceeecCCCCCCc--------------cceeec
Q 040812 138 GSLEIYVKSRGRLSEDIICTISRQVLKGLFYMH---SRNIVHRDIKPANVLINEKMEHPC--------------GYSCLY 200 (300)
Q Consensus 138 ~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~i~H~Dlkp~Nill~~~~~~~~--------------~~~~~~ 200 (300)
|+|.++++ .+++..+..++.||+.||+||| +.+|+||||||+||+++.+....+ .++..|
T Consensus 768 g~L~~~l~---~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~t~~y 844 (968)
T PLN00113 768 KNLSEVLR---NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLRLSLPGLLCTDTKCFISSAY 844 (968)
T ss_pred CcHHHHHh---cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEEeccccccccCCCccccccc
Confidence 99999996 4889999999999999999999 669999999999999987654321 112567
Q ss_pred cccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCC-chHHHHHHHHhhC------CCCCC------CCCCCh
Q 040812 201 ESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQE-PDFLSLMLAICFR------EPPSL------PECSSE 267 (300)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~-~~~~~~~~~~~~~------~~~~~------~~~~~~ 267 (300)
.+||... +..++.++|||||||++|||+||+.||...... ............. ..+.. +.....
T Consensus 845 ~aPE~~~---~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (968)
T PLN00113 845 VAPETRE---TKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIV 921 (968)
T ss_pred cCccccc---CCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHH
Confidence 8888654 556788999999999999999999999543211 1111111110000 00111 111123
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHhcC
Q 040812 268 KFRDFIRCCLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 268 ~l~~li~~~l~~~dp~~Rpt~~~~l~h 294 (300)
++.+++.+||+. ||++|||+.|+++.
T Consensus 922 ~~~~l~~~Cl~~-~P~~RPt~~evl~~ 947 (968)
T PLN00113 922 EVMNLALHCTAT-DPTARPCANDVLKT 947 (968)
T ss_pred HHHHHHHhhCcC-CchhCcCHHHHHHH
Confidence 577899999999 99999999999863
No 382
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=3.9e-36 Score=277.53 Aligned_cols=237 Identities=21% Similarity=0.218 Sum_probs=156.8
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccC----CeEEEEEEeecCCCCCCCHHHHHHHHhc---CCCceeEeceeee-----
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQT----LALYALKVMQCDRGTPPNPQELNILRQT---NSPYIVKCHQIFT----- 122 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~----~~~vaiK~~~~~~~~~~~~~E~~~l~~l---~h~niv~~~~~~~----- 122 (300)
..++|++.+.||+|+||.||+|.+..+ +..||+|.+..... .|..+..++ .+.++..++..+.
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~-----~e~~~~e~l~~~~~~~~~~~~~~~~~~~~~ 204 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA-----VEIWMNERVRRACPNSCADFVYGFLEPVSS 204 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch-----hHHHHHHHHHhhchhhHHHHHHhhhccccc
Confidence 567899999999999999999999988 89999998753221 233333332 2333333222211
Q ss_pred CCCCcEEEEEeccCCCCHHHHHHhCCC--------------------CCHHHHHHHHHHHHHHHHHhHhCCccccCCCCC
Q 040812 123 KPSGEVSILMEYMDAGSLEIYVKSRGR--------------------LSEDIICTISRQVLKGLFYMHSRNIVHRDIKPA 182 (300)
Q Consensus 123 ~~~~~~~lv~e~~~~~~L~~~l~~~~~--------------------l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~ 182 (300)
......++||||+.+++|.+++..... .....+..++.||+.||.|||++||+||||||+
T Consensus 205 ~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~ 284 (566)
T PLN03225 205 KKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQ 284 (566)
T ss_pred ccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHH
Confidence 223479999999999999999875421 123456789999999999999999999999999
Q ss_pred ceeecCC-CCCC---ccc-----------------eeeccccccccccCC-------------------CCCCchhhHHH
Q 040812 183 NVLINEK-MEHP---CGY-----------------SCLYESGEARHRKHG-------------------GYNGFAADIWS 222 (300)
Q Consensus 183 Nill~~~-~~~~---~~~-----------------~~~~~~~~~~~~~~~-------------------~~~~~~~DiwS 222 (300)
|||++.+ +..+ +|. +..|.+||....... ..++.++||||
T Consensus 285 NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwS 364 (566)
T PLN03225 285 NIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYS 364 (566)
T ss_pred HEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHH
Confidence 9999853 3322 222 224566664321111 11334679999
Q ss_pred HHHHHHHHHhCCCCCCCCCCCchHHHHHHH-----------HhhCCCC------CCCCCCChHHHHHHHHHhccCCCCCC
Q 040812 223 FGVTMMELYMGYYPFLEPGQEPDFLSLMLA-----------ICFREPP------SLPECSSEKFRDFIRCCLQKGDPSKR 285 (300)
Q Consensus 223 lG~il~elltg~~pf~~~~~~~~~~~~~~~-----------~~~~~~~------~~~~~~~~~l~~li~~~l~~~dp~~R 285 (300)
|||++|||+++..++... ...+...+.. ....... ...+.......+||.+||+. ||++|
T Consensus 365 lGviL~el~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~-dP~kR 441 (566)
T PLN03225 365 AGLIFLQMAFPNLRSDSN--LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRF-KGRQR 441 (566)
T ss_pred HHHHHHHHHhCcCCCchH--HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccC-CcccC
Confidence 999999999977665321 1111111100 0000000 01111233456899999999 99999
Q ss_pred CCHHHHhcCCCCCC
Q 040812 286 WTASQLLSHPFLAD 299 (300)
Q Consensus 286 pt~~~~l~hpw~~~ 299 (300)
||+.++|+||||++
T Consensus 442 ~ta~e~L~Hpff~~ 455 (566)
T PLN03225 442 ISAKAALAHPYFDR 455 (566)
T ss_pred CCHHHHhCCcCcCC
Confidence 99999999999975
No 383
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-36 Score=265.29 Aligned_cols=223 Identities=24% Similarity=0.324 Sum_probs=183.2
Q ss_pred eeeeeecCCcceEEEEEEEccC----CeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEE
Q 040812 60 EKLQVLGQGNGGTVFKVRHKQT----LALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILM 132 (300)
Q Consensus 60 ~~~~~lg~G~~g~V~~~~~~~~----~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~ 132 (300)
.+.++||.|.||.||.|....- .--||||..+.+... ..|..|..+|+++.||||++++|++... ..||||
T Consensus 392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~--P~Wivm 469 (974)
T KOG4257|consen 392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ--PMWIVM 469 (974)
T ss_pred cHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc--ceeEEE
Confidence 4468899999999999986532 235899998775433 3457899999999999999999998753 699999
Q ss_pred eccCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccceee------------
Q 040812 133 EYMDAGSLEIYVKSRG-RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCL------------ 199 (300)
Q Consensus 133 e~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~~------------ 199 (300)
|+++-|.|..|++.+. .++......++.||+.||.|||++.++||||..+|||+.+..-.+.+++++
T Consensus 470 EL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYka 549 (974)
T KOG4257|consen 470 ELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKA 549 (974)
T ss_pred ecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccccchhhc
Confidence 9999999999998754 589999999999999999999999999999999999998765444443333
Q ss_pred --------ccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHH
Q 040812 200 --------YESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFR 270 (300)
Q Consensus 200 --------~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (300)
|++||..... .++.+||||-|||.|||++. |..||.+-.+.. .+..+-.+.....|.++++.+.
T Consensus 550 S~~kLPIKWmaPESINfR---rFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD----VI~~iEnGeRlP~P~nCPp~LY 622 (974)
T KOG4257|consen 550 SRGKLPIKWMAPESINFR---RFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD----VIGHIENGERLPCPPNCPPALY 622 (974)
T ss_pred cccccceeecCccccchh---cccchhhHHHHHHHHHHHHHhcCCccccccccc----eEEEecCCCCCCCCCCCChHHH
Confidence 5566655432 35679999999999999975 999998765542 2333455778888999999999
Q ss_pred HHHHHHhccCCCCCCCCHHHHh
Q 040812 271 DFIRCCLQKGDPSKRWTASQLL 292 (300)
Q Consensus 271 ~li~~~l~~~dp~~Rpt~~~~l 292 (300)
.++.+||.+ ||.+||++.++.
T Consensus 623 slmskcWay-eP~kRPrftei~ 643 (974)
T KOG4257|consen 623 SLMSKCWAY-EPSKRPRFTEIK 643 (974)
T ss_pred HHHHHHhcc-CcccCCcHHHHH
Confidence 999999999 999999988764
No 384
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.6e-36 Score=267.10 Aligned_cols=235 Identities=24% Similarity=0.303 Sum_probs=187.2
Q ss_pred ceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC-----CCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 59 LEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP-----PNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 59 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
|..++.||-|+||.|.+++..+|...||+|.+.+..... ....|-.||.....+=||+|+..|.+.. .+|+|||
T Consensus 631 Fvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkd-nLYFVMd 709 (1034)
T KOG0608|consen 631 FVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKD-NLYFVMD 709 (1034)
T ss_pred eEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCC-ceEEEEe
Confidence 667899999999999999999999999999987543222 2245889999999999999999998865 8999999
Q ss_pred ccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccceee--------------
Q 040812 134 YMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCL-------------- 199 (300)
Q Consensus 134 ~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~~-------------- 199 (300)
|++||++..+|-+-+.|++..++.++..+..|+++.|..|+|||||||+|||||.++..++.++++
T Consensus 710 YIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq 789 (1034)
T KOG0608|consen 710 YIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQ 789 (1034)
T ss_pred ccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceecccccccc
Confidence 999999999999989999999999999999999999999999999999999999987764443333
Q ss_pred -----------------------------------------------ccccccccccCCCCCCchhhHHHHHHHHHHHHh
Q 040812 200 -----------------------------------------------YESGEARHRKHGGYNGFAADIWSFGVTMMELYM 232 (300)
Q Consensus 200 -----------------------------------------------~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt 232 (300)
|.+||... ...++..+|+||.|||||||+.
T Consensus 790 ~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~---r~g~~q~cdwws~gvil~em~~ 866 (1034)
T KOG0608|consen 790 EGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLA---RTGYTQLCDWWSVGVILYEMLV 866 (1034)
T ss_pred CCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhc---ccCccccchhhHhhHHHHHHhh
Confidence 22222222 1224568999999999999999
Q ss_pred CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHhccCCCCCCCC---HHHHhcCCCCCCC
Q 040812 233 GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWT---ASQLLSHPFLADA 300 (300)
Q Consensus 233 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt---~~~~l~hpw~~~~ 300 (300)
|++||...........+++- ..........+++.+..++|.+++. ++++|.. ++++..||||+.+
T Consensus 867 g~~pf~~~tp~~tq~kv~nw-~~~l~~~~~~~ls~e~~~li~kLc~--sad~RLGkng~d~vKaHpfFkgI 934 (1034)
T KOG0608|consen 867 GQPPFLADTPGETQYKVINW-RNFLHIPYQGNLSKEALDLIQKLCC--SADSRLGKNGADQVKAHPFFKGI 934 (1034)
T ss_pred CCCCccCCCCCcceeeeeeh-hhccccccccccCHHHHHHHHHHhc--ChhhhhcccchhhhhcCcccccc
Confidence 99999776554433332211 1112223345789999999998875 6888884 7789999999864
No 385
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=7.1e-35 Score=263.33 Aligned_cols=244 Identities=22% Similarity=0.196 Sum_probs=169.7
Q ss_pred CCCcceeeeeecCCcceEEEEEEEc----------------cCCeEEEEEEeecCCC----------------CCCCHHH
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHK----------------QTLALYALKVMQCDRG----------------TPPNPQE 102 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~----------------~~~~~vaiK~~~~~~~----------------~~~~~~E 102 (300)
..++|++.++||+|+||.||+|... ..++.||||.+..... ......|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 4678999999999999999999752 2356899999864321 1122457
Q ss_pred HHHHHhcCCCce-----eEeceeeeCC-------CCcEEEEEeccCCCCHHHHHHhCC----------------------
Q 040812 103 LNILRQTNSPYI-----VKCHQIFTKP-------SGEVSILMEYMDAGSLEIYVKSRG---------------------- 148 (300)
Q Consensus 103 ~~~l~~l~h~ni-----v~~~~~~~~~-------~~~~~lv~e~~~~~~L~~~l~~~~---------------------- 148 (300)
+.++.+++|.++ +++++++... .+..|+||||+++++|.+++....
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777888877654 5667766431 246899999999999999886321
Q ss_pred --CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc--------------------eeeccccccc
Q 040812 149 --RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY--------------------SCLYESGEAR 206 (300)
Q Consensus 149 --~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~--------------------~~~~~~~~~~ 206 (300)
.+++..++.++.|++.||.|||+.+|+||||||+|||++.++...+.+ +..|.+||..
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l 382 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEEL 382 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhh
Confidence 235677889999999999999999999999999999998765432221 2346666654
Q ss_pred cccCCC-------------------CCCchhhHHHHHHHHHHHHhCCC-CCCCCCCCchHHH----HH----HHHhhCCC
Q 040812 207 HRKHGG-------------------YNGFAADIWSFGVTMMELYMGYY-PFLEPGQEPDFLS----LM----LAICFREP 258 (300)
Q Consensus 207 ~~~~~~-------------------~~~~~~DiwSlG~il~elltg~~-pf~~~~~~~~~~~----~~----~~~~~~~~ 258 (300)
...... ....+.||||+||++|+|++|.. ||........... .. ........
T Consensus 383 ~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~ 462 (507)
T PLN03224 383 VMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYD 462 (507)
T ss_pred cCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCC
Confidence 321100 01125799999999999999976 7743211110000 00 00111122
Q ss_pred CCCCCCCChHHHHHHHHHhccCCC---CCCCCHHHHhcCCCCCC
Q 040812 259 PSLPECSSEKFRDFIRCCLQKGDP---SKRWTASQLLSHPFLAD 299 (300)
Q Consensus 259 ~~~~~~~~~~l~~li~~~l~~~dp---~~Rpt~~~~l~hpw~~~ 299 (300)
....+..++..+||+.+||.. +| .+|+|++|+|+||||..
T Consensus 463 ~~~~d~~s~~~~dLi~~LL~~-~~~~~~~RlSa~eaL~Hp~f~~ 505 (507)
T PLN03224 463 FSLLDRNKEAGWDLACKLITK-RDQANRGRLSVGQALSHRFFLP 505 (507)
T ss_pred cccccccChHHHHHHHHHhcc-CCCCcccCCCHHHHhCCCCcCC
Confidence 233456788999999999997 55 78999999999999964
No 386
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-37 Score=244.80 Aligned_cols=236 Identities=28% Similarity=0.426 Sum_probs=184.8
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC---CCHHHHHHHHh-cCCCceeEeceeeeCCCCcEEEE
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP---PNPQELNILRQ-TNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~lv 131 (300)
.++.+-+..||.|+||+|++..++.+|+..|||.++...... .++.|.....+ -+.||||+++|..-.+ |..|+.
T Consensus 63 ~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~E-GdcWiC 141 (361)
T KOG1006|consen 63 SDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSE-GDCWIC 141 (361)
T ss_pred cchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcC-Cceeee
Confidence 345677889999999999999999999999999998765432 22446655444 4679999999987664 589999
Q ss_pred EeccCCCCHHHHHH-----hCCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCceeecCCCCCCccc---------
Q 040812 132 MEYMDAGSLEIYVK-----SRGRLSEDIICTISRQVLKGLFYMHS-RNIVHRDIKPANVLINEKMEHPCGY--------- 196 (300)
Q Consensus 132 ~e~~~~~~L~~~l~-----~~~~l~~~~~~~i~~qi~~~l~~lH~-~~i~H~Dlkp~Nill~~~~~~~~~~--------- 196 (300)
||+|.- +|..+-+ +..++++..+-.|.-..+.||.||-+ ..|+|||+||+|||++..+..+.-.
T Consensus 142 MELMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~ 220 (361)
T KOG1006|consen 142 MELMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVD 220 (361)
T ss_pred HHHHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHH
Confidence 999965 7765543 34579999999999999999999975 5899999999999999887653221
Q ss_pred ---------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCC--C--
Q 040812 197 ---------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLP--E-- 263 (300)
Q Consensus 197 ---------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~--~-- 263 (300)
..-|++||-..... ..|..+|||||||++|||+.||..||...+. .++.+.++..+.++.+- .
T Consensus 221 SiAkT~daGCrpYmAPERi~p~~-~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s---vfeql~~Vv~gdpp~l~~~~~~ 296 (361)
T KOG1006|consen 221 SIAKTVDAGCRPYMAPERIDPSD-KGYDIRSDVWSLGITLYEVATGNFPYRKWDS---VFEQLCQVVIGDPPILLFDKEC 296 (361)
T ss_pred HHHhhhccCCccccChhccCCcc-CCcchhhhhhhhcceEeeeecCCCCcchHHH---HHHHHHHHHcCCCCeecCcccc
Confidence 23366666554332 3467799999999999999999999976543 34455555666666542 2
Q ss_pred -CCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCC
Q 040812 264 -CSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLA 298 (300)
Q Consensus 264 -~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~ 298 (300)
..+..+..||..||.+ |.+.||...+++++||.+
T Consensus 297 ~~~s~~~~~fintCl~K-d~~~Rpky~~Lk~~~fyr 331 (361)
T KOG1006|consen 297 VHYSFSMVRFINTCLIK-DRSDRPKYDDLKKFPFYR 331 (361)
T ss_pred cccCHHHHHHHHHHhhc-ccccCcchhhhhcCchhh
Confidence 3678899999999999 999999999999999985
No 387
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=2e-34 Score=239.85 Aligned_cols=220 Identities=37% Similarity=0.554 Sum_probs=175.6
Q ss_pred cceEEEEEEEccCCeEEEEEEeecCCC---CCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEeccCCCCHHHHHH
Q 040812 69 NGGTVFKVRHKQTLALYALKVMQCDRG---TPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVK 145 (300)
Q Consensus 69 ~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 145 (300)
+||.||+|.+..+++.+|+|++..... ...+.+|+..+++++|+|++++++.+.... ..++++||+++++|.+++.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~-~~~l~~e~~~~~~L~~~~~ 79 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDED-KLYLVMEYCDGGDLFDLLK 79 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCC-EEEEEEeCCCCCCHHHHHH
Confidence 589999999999899999999876544 235578999999999999999999987654 8999999999999999998
Q ss_pred hCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc------------------eeecccccccc
Q 040812 146 SRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY------------------SCLYESGEARH 207 (300)
Q Consensus 146 ~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~------------------~~~~~~~~~~~ 207 (300)
....++...+..++.+++.++.+||+.+++|+||+|+||+++.++...+.+ ...|.+||...
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~ 159 (244)
T smart00220 80 KRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEVLL 159 (244)
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHHHc
Confidence 766689999999999999999999999999999999999999875443222 11233444332
Q ss_pred ccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCC---CChHHHHHHHHHhccCCCCC
Q 040812 208 RKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPEC---SSEKFRDFIRCCLQKGDPSK 284 (300)
Q Consensus 208 ~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~~dp~~ 284 (300)
+...+.++||||||+++|+|++|..||........... ... ......... .+.++.+++.+||.. +|++
T Consensus 160 ---~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~-~p~~ 231 (244)
T smart00220 160 ---GKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFK---KIG-KPKPPFPPPEWKISPEAKDLIRKLLVK-DPEK 231 (244)
T ss_pred ---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHH---HHh-ccCCCCccccccCCHHHHHHHHHHccC-Cchh
Confidence 44567799999999999999999999965332222222 111 222222221 788999999999999 9999
Q ss_pred CCCHHHHhcCCCC
Q 040812 285 RWTASQLLSHPFL 297 (300)
Q Consensus 285 Rpt~~~~l~hpw~ 297 (300)
||++.++++||||
T Consensus 232 Rp~~~~~~~~~~~ 244 (244)
T smart00220 232 RLTAEEALQHPFF 244 (244)
T ss_pred ccCHHHHhhCCCC
Confidence 9999999999997
No 388
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=2.6e-36 Score=260.52 Aligned_cols=236 Identities=28% Similarity=0.430 Sum_probs=185.6
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-CCCHHHHHHHHhcCC------CceeEeceeeeCCCCcEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-PPNPQELNILRQTNS------PYIVKCHQIFTKPSGEVS 129 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~E~~~l~~l~h------~niv~~~~~~~~~~~~~~ 129 (300)
++|.+....|+|-|++|..|.+..-|..||||++.++..- ..-+.|+++|++|+. -++++++-.|...+ ++|
T Consensus 432 ~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hkn-HLC 510 (752)
T KOG0670|consen 432 SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKN-HLC 510 (752)
T ss_pred ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcc-eeE
Confidence 4688999999999999999999998999999999875533 344789999999963 47899988887755 999
Q ss_pred EEEeccCCCCHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCC----CCccc------
Q 040812 130 ILMEYMDAGSLEIYVKSRG---RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKME----HPCGY------ 196 (300)
Q Consensus 130 lv~e~~~~~~L~~~l~~~~---~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~----~~~~~------ 196 (300)
||||.+.- +|.+.++..+ .|....++.++.|+..||..|-..||+|.||||+|||+++... +++|.
T Consensus 511 lVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~e 589 (752)
T KOG0670|consen 511 LVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASFASE 589 (752)
T ss_pred EEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCcccccccc
Confidence 99999954 9999999755 3888999999999999999999999999999999999987643 23332
Q ss_pred --------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCC----------
Q 040812 197 --------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREP---------- 258 (300)
Q Consensus 197 --------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~---------- 258 (300)
+.+|.+||... |-.|++..|+||+||+||||.||+..|.+.... .++.....+-...+
T Consensus 590 neitPYLVSRFYRaPEIiL---G~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN-~MLrl~me~KGk~p~KmlRKgqF~ 665 (752)
T KOG0670|consen 590 NEITPYLVSRFYRAPEIIL---GLPYDYPIDTWSVGCTLYELYTGKILFPGRTNN-QMLRLFMELKGKFPNKMLRKGQFK 665 (752)
T ss_pred ccccHHHHHHhccCcceee---cCcccCCccceeeceeeEEeeccceecCCCCcH-HHHHHHHHhcCCCcHHHhhhcchh
Confidence 23355555544 888999999999999999999999999765443 22222222110000
Q ss_pred -------------------------------C------------CCCCC---CChHHHHHHHHHhccCCCCCCCCHHHHh
Q 040812 259 -------------------------------P------------SLPEC---SSEKFRDFIRCCLQKGDPSKRWTASQLL 292 (300)
Q Consensus 259 -------------------------------~------------~~~~~---~~~~l~~li~~~l~~~dp~~Rpt~~~~l 292 (300)
| .+|.. .-.++++|+..||.. ||++|.|..++|
T Consensus 666 dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~L-dP~KRit~nqAL 744 (752)
T KOG0670|consen 666 DQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLIL-DPEKRITVNQAL 744 (752)
T ss_pred hhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhcc-ChhhcCCHHHHh
Confidence 0 01110 124689999999999 999999999999
Q ss_pred cCCCCCC
Q 040812 293 SHPFLAD 299 (300)
Q Consensus 293 ~hpw~~~ 299 (300)
+||||.+
T Consensus 745 ~HpFi~~ 751 (752)
T KOG0670|consen 745 KHPFITE 751 (752)
T ss_pred cCCcccC
Confidence 9999974
No 389
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-34 Score=236.90 Aligned_cols=235 Identities=26% Similarity=0.351 Sum_probs=181.6
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCC----CCCCHHHHHHHHhcCCCceeEeceeeeCCC-----C
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG----TPPNPQELNILRQTNSPYIVKCHQIFTKPS-----G 126 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~ 126 (300)
..+|.-++.+|.|.- .|-.+.+.-.++.||+|....... .+...+|...+..++|+||++++.+|.... .
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 356888899999998 788899988899999998754322 233467999999999999999999987543 2
Q ss_pred cEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCC-------------
Q 040812 127 EVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHP------------- 193 (300)
Q Consensus 127 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~------------- 193 (300)
..|+|||++.. +|.+.+. -.++-..++.|+.|++.|++|||+.||+||||||+||++..+...+
T Consensus 95 e~y~v~e~m~~-nl~~vi~--~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~ 171 (369)
T KOG0665|consen 95 EVYLVMELMDA-NLCQVIL--MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD 171 (369)
T ss_pred hHHHHHHhhhh-HHHHHHH--HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCcc
Confidence 48999999965 9998887 3578889999999999999999999999999999999998664332
Q ss_pred -----ccceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCC-----------
Q 040812 194 -----CGYSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFRE----------- 257 (300)
Q Consensus 194 -----~~~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~----------- 257 (300)
.-.+..|.+||+.. |..+...+||||+||++.||++|..-|.+.+....+.+++.......
T Consensus 172 ~~mtpyVvtRyyrapevil---~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~ 248 (369)
T KOG0665|consen 172 FMMTPYVVTRYYRAPEVIL---GMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTV 248 (369)
T ss_pred cccCchhheeeccCchhee---ccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHH
Confidence 22355577777765 44478899999999999999999999975544333322222111000
Q ss_pred ---------------CCCCCC-----------CCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCC
Q 040812 258 ---------------PPSLPE-----------CSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLA 298 (300)
Q Consensus 258 ---------------~~~~~~-----------~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~ 298 (300)
...+|+ .-+..+++++.+||.. ||++|.+++++|+||||+
T Consensus 249 r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi-~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 249 RNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVI-DPEKRISVDDALRHPYIK 314 (369)
T ss_pred HHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhcc-ChhhcccHHHHhcCCeee
Confidence 000111 1135689999999999 999999999999999996
No 390
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-34 Score=241.28 Aligned_cols=232 Identities=19% Similarity=0.288 Sum_probs=176.1
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCC-HHHHHHHHhcCCCceeEeceeeeCCCC---cEEEEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN-PQELNILRQTNSPYIVKCHQIFTKPSG---EVSILM 132 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~-~~E~~~l~~l~h~niv~~~~~~~~~~~---~~~lv~ 132 (300)
.+.++.+.||+|.||.||+|+|+ |+.||||+|........+ ..|+.....++|+||+.+++.=..+++ .+|||.
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvT 288 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVT 288 (513)
T ss_pred heeEEEEEecCccccceeecccc--CCceEEEEecccchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEee
Confidence 45788999999999999999998 789999999866555444 235555566899999999987433333 499999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhC--------CccccCCCCCceeecCCCCCC-----------
Q 040812 133 EYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSR--------NIVHRDIKPANVLINEKMEHP----------- 193 (300)
Q Consensus 133 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~--------~i~H~Dlkp~Nill~~~~~~~----------- 193 (300)
+|.+.|+|.+|+.. ..++......++..+++||.|||.. .|.|||||..|||+..++.+-
T Consensus 289 dYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~ 367 (513)
T KOG2052|consen 289 DYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 367 (513)
T ss_pred ecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEec
Confidence 99999999999987 4799999999999999999999953 399999999999998876541
Q ss_pred ------------ccceeeccccccccccCC--CCCC-chhhHHHHHHHHHHHHhC----------CCCCCCCCCCchHHH
Q 040812 194 ------------CGYSCLYESGEARHRKHG--GYNG-FAADIWSFGVTMMELYMG----------YYPFLEPGQEPDFLS 248 (300)
Q Consensus 194 ------------~~~~~~~~~~~~~~~~~~--~~~~-~~~DiwSlG~il~elltg----------~~pf~~~~~~~~~~~ 248 (300)
--+++.|++||....... .+.+ ..+||||||.++||++.+ .+||.+.-+.....+
T Consensus 368 ~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~e 447 (513)
T KOG2052|consen 368 SDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFE 447 (513)
T ss_pred ccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHH
Confidence 135788999998764332 1112 368999999999999863 688876544444444
Q ss_pred HHHHH--hhCCCCCCCCCCC-----hHHHHHHHHHhccCCCCCCCCHHHHh
Q 040812 249 LMLAI--CFREPPSLPECSS-----EKFRDFIRCCLQKGDPSKRWTASQLL 292 (300)
Q Consensus 249 ~~~~~--~~~~~~~~~~~~~-----~~l~~li~~~l~~~dp~~Rpt~~~~l 292 (300)
.+..+ ..+..|..|..+. ..+..+|+.||-. ||..|.|+--+.
T Consensus 448 eMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~-Np~aRltALriK 497 (513)
T KOG2052|consen 448 EMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYA-NPAARLTALRIK 497 (513)
T ss_pred HHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcC-CchhhhHHHHHH
Confidence 44432 2334445444332 2477899999999 999999976543
No 391
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-33 Score=259.25 Aligned_cols=231 Identities=23% Similarity=0.363 Sum_probs=187.3
Q ss_pred CCCcceeeeeecCCcceEEEEEEEcc-------CCeEEEEEEeecCCCC---CCCHHHHHHHHhc-CCCceeEeceeeeC
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQ-------TLALYALKVMQCDRGT---PPNPQELNILRQT-NSPYIVKCHQIFTK 123 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~-------~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l-~h~niv~~~~~~~~ 123 (300)
..++..+.+.||+|.||.|++|.... ....||||.++..... ..+..|+++|+.+ .|+||+.+++++..
T Consensus 294 ~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~ 373 (609)
T KOG0200|consen 294 PRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQ 373 (609)
T ss_pred chhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeecc
Confidence 34445677799999999999997441 1457999998865544 2346799999987 59999999999887
Q ss_pred CCCcEEEEEeccCCCCHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeec
Q 040812 124 PSGEVSILMEYMDAGSLEIYVKSRG----------------RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLIN 187 (300)
Q Consensus 124 ~~~~~~lv~e~~~~~~L~~~l~~~~----------------~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~ 187 (300)
.+..++|+||+..|+|..+++..+ .++......++.||+.|++||++..++||||.++|||++
T Consensus 374 -~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~ 452 (609)
T KOG0200|consen 374 -DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLIT 452 (609)
T ss_pred -CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEec
Confidence 568999999999999999998764 388899999999999999999999999999999999999
Q ss_pred CCCCCCccc----------------------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCc
Q 040812 188 EKMEHPCGY----------------------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEP 244 (300)
Q Consensus 188 ~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~ 244 (300)
.+...++++ ...|++||+.. ...++.++|||||||+|||++| |..||.+.....
T Consensus 453 ~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~---~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~ 529 (609)
T KOG0200|consen 453 KNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLF---DRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTE 529 (609)
T ss_pred CCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhc---cCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHH
Confidence 875443222 22355555554 3567889999999999999998 899996633233
Q ss_pred hHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 245 DFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
+. ...+..+.....|..+++++.++|..||.. +|++||++.++.+
T Consensus 530 ~l---~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~-~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 530 EL---LEFLKEGNRMEQPEHCSDEIYDLMKSCWNA-DPEDRPTFSECVE 574 (609)
T ss_pred HH---HHHHhcCCCCCCCCCCCHHHHHHHHHHhCC-CcccCCCHHHHHH
Confidence 33 334556778889999999999999999999 9999999998763
No 392
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-35 Score=257.32 Aligned_cols=241 Identities=33% Similarity=0.462 Sum_probs=201.5
Q ss_pred CCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC--CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEE
Q 040812 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 54 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv 131 (300)
+..++|+++..+|+|+||.||+++++.+++..|+|+++..... ....+|+-+++.-+|+||+.+++.+.... .+|+.
T Consensus 12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~d-klwic 90 (829)
T KOG0576|consen 12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRD-KLWIC 90 (829)
T ss_pred CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhc-CcEEE
Confidence 4567899999999999999999999999999999999865433 33467999999999999999999998755 79999
Q ss_pred EeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCC-------------------
Q 040812 132 MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEH------------------- 192 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~------------------- 192 (300)
||||.||+|.+.-.-.+.+++.++....+..+.||+|||++|-+|||||-.||++++.+..
T Consensus 91 MEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~Krk 170 (829)
T KOG0576|consen 91 MEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRK 170 (829)
T ss_pred EEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhhhhhh
Confidence 9999999999998888899999999999999999999999999999999999999987653
Q ss_pred CccceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCC--CCCCCCChHHH
Q 040812 193 PCGYSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPP--SLPECSSEKFR 270 (300)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~ 270 (300)
.+-++..|++||.......+.|...+|||++|++..|+---++|.+...+.... ..+... ...++ .-+..+++.+-
T Consensus 171 sfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l-~LmTkS-~~qpp~lkDk~kws~~fh 248 (829)
T KOG0576|consen 171 SFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRAL-FLMTKS-GFQPPTLKDKTKWSEFFH 248 (829)
T ss_pred cccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHH-HHhhcc-CCCCCcccCCccchHHHH
Confidence 233567788998877777777888999999999999999888887654332221 122221 12223 33456789999
Q ss_pred HHHHHHhccCCCCCCCCHHHHhcCCCCC
Q 040812 271 DFIRCCLQKGDPSKRWTASQLLSHPFLA 298 (300)
Q Consensus 271 ~li~~~l~~~dp~~Rpt~~~~l~hpw~~ 298 (300)
+|++.+|.+ +|++||+++.+|+|||..
T Consensus 249 ~fvK~altk-npKkRptaeklL~h~fvs 275 (829)
T KOG0576|consen 249 NFVKGALTK-NPKKRPTAEKLLQHPFVS 275 (829)
T ss_pred HHHHHHhcC-CCccCCChhhheeceeec
Confidence 999999999 999999999999999975
No 393
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-33 Score=233.62 Aligned_cols=231 Identities=18% Similarity=0.254 Sum_probs=183.7
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccC-----CeEEEEEEeecCCCCC---CCHHHHHHHHhcCCCceeEeceeeeCCCC
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQT-----LALYALKVMQCDRGTP---PNPQELNILRQTNSPYIVKCHQIFTKPSG 126 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~~~~---~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 126 (300)
...++++.-.+-+|+||.||.|.|++. .+.|-+|.++.....- .+..|--.+..+.|||+.++.++...+..
T Consensus 282 ~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~ 361 (563)
T KOG1024|consen 282 QRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYA 361 (563)
T ss_pred hhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccC
Confidence 445678888999999999999987642 3345567665433221 22457777888899999999999877766
Q ss_pred cEEEEEeccCCCCHHHHHHhC--------CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc--
Q 040812 127 EVSILMEYMDAGSLEIYVKSR--------GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY-- 196 (300)
Q Consensus 127 ~~~lv~e~~~~~~L~~~l~~~--------~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~-- 196 (300)
..++++.+..-|+|..++... +.++..+...++.|++.|+.|||.+|++|.||..+|++|++....++.+
T Consensus 362 ~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsa 441 (563)
T KOG1024|consen 362 TPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSA 441 (563)
T ss_pred cceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccch
Confidence 789999999999999999821 2477888899999999999999999999999999999999875543322
Q ss_pred -------------------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhC
Q 040812 197 -------------------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFR 256 (300)
Q Consensus 197 -------------------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 256 (300)
...|+++|+.. ...++.++|+|||||+||||+| |+.||.+.+. .+....+..+
T Consensus 442 LSRDLFP~DYhcLGDnEnRPvkWMslEal~---n~~yssasDvWsfGVllWELmtlg~~PyaeIDP----fEm~~ylkdG 514 (563)
T KOG1024|consen 442 LSRDLFPGDYHCLGDNENRPVKWMSLEALQ---NSHYSSASDVWSFGVLLWELMTLGKLPYAEIDP----FEMEHYLKDG 514 (563)
T ss_pred hccccCcccccccCCCCCCcccccCHHHHh---hhhhcchhhhHHHHHHHHHHHhcCCCCccccCH----HHHHHHHhcc
Confidence 22345555544 4457789999999999999998 9999976543 3555556667
Q ss_pred CCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhc
Q 040812 257 EPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLS 293 (300)
Q Consensus 257 ~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~ 293 (300)
.....|-++++++...|..||.. .|++||+++++..
T Consensus 515 yRlaQP~NCPDeLf~vMacCWal-lpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 515 YRLAQPFNCPDELFTVMACCWAL-LPEERPSFSQLVI 550 (563)
T ss_pred ceecCCCCCcHHHHHHHHHHHhc-CcccCCCHHHHHH
Confidence 88888999999999999999999 9999999999864
No 394
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-33 Score=251.17 Aligned_cols=227 Identities=23% Similarity=0.266 Sum_probs=180.9
Q ss_pred ceeeeeecCCcceEEEEEEEccCC----eEEEEEEeecCCCCC---CCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEE
Q 040812 59 LEKLQVLGQGNGGTVFKVRHKQTL----ALYALKVMQCDRGTP---PNPQELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 59 y~~~~~lg~G~~g~V~~~~~~~~~----~~vaiK~~~~~~~~~---~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv 131 (300)
....++||+|+||+||+|.|--.+ .+||+|++......+ .+.+|+.+|.++.|||++++++++..+ .+.||
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s--~~qlv 775 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLS--TLQLV 775 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccc--hHHHH
Confidence 456789999999999999985333 378999987655443 346799999999999999999998764 58899
Q ss_pred EeccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccceeec--cccccc--
Q 040812 132 MEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLY--ESGEAR-- 206 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~~~--~~~~~~-- 206 (300)
++|+++|+|.++++. +.++.....+.|..||++|+.|||+++++||||..+|||+..-...++..+++. .++...
T Consensus 776 tq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey 855 (1177)
T KOG1025|consen 776 TQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEY 855 (1177)
T ss_pred HHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCcccccc
Confidence 999999999999986 457899999999999999999999999999999999999987665544333221 111111
Q ss_pred --------------cccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHH
Q 040812 207 --------------HRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRD 271 (300)
Q Consensus 207 --------------~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (300)
+......++.++|||||||++||++| |..||.+...+ ++-.-...+.....|..++-++.-
T Consensus 856 ~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~----eI~dlle~geRLsqPpiCtiDVy~ 931 (1177)
T KOG1025|consen 856 SAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAE----EIPDLLEKGERLSQPPICTIDVYM 931 (1177)
T ss_pred cccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHH----HhhHHHhccccCCCCCCccHHHHH
Confidence 11223456789999999999999998 99999765432 333333345667888899999999
Q ss_pred HHHHHhccCCCCCCCCHHHHh
Q 040812 272 FIRCCLQKGDPSKRWTASQLL 292 (300)
Q Consensus 272 li~~~l~~~dp~~Rpt~~~~l 292 (300)
++.+||.. |+..||+++++.
T Consensus 932 ~mvkCwmi-d~~~rp~fkel~ 951 (1177)
T KOG1025|consen 932 VMVKCWMI-DADSRPTFKELA 951 (1177)
T ss_pred HHHHHhcc-CcccCccHHHHH
Confidence 99999999 999999998875
No 395
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=100.00 E-value=8.6e-33 Score=233.65 Aligned_cols=236 Identities=27% Similarity=0.397 Sum_probs=179.4
Q ss_pred CcceeeeeecCCcceEEEEEEEcc---CCeEEEEEEeecCCCCCCCHHHHHHHHhc-CCCceeEeceeeeCCCCcEEEEE
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQ---TLALYALKVMQCDRGTPPNPQELNILRQT-NSPYIVKCHQIFTKPSGEVSILM 132 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~lv~ 132 (300)
..|.++.+||+|+|+.||++.+.. ..+.||+|.+..........+|+++|..+ .+.||+.+.+++...+ ..++||
T Consensus 36 ~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd-~v~ivl 114 (418)
T KOG1167|consen 36 NAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCFRNND-QVAIVL 114 (418)
T ss_pred hhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhhccCC-eeEEEe
Confidence 458889999999999999999887 78899999998777777778999999998 4789999999987754 899999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCC----Cc--------------
Q 040812 133 EYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEH----PC-------------- 194 (300)
Q Consensus 133 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~----~~-------------- 194 (300)
||+++....++.. .++...++.+++.++.||.++|.+||+||||||+|+|.+..... ++
T Consensus 115 p~~~H~~f~~l~~---~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~ 191 (418)
T KOG1167|consen 115 PYFEHDRFRDLYR---SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEH 191 (418)
T ss_pred cccCccCHHHHHh---cCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHhhhhhhh
Confidence 9999988888886 47899999999999999999999999999999999999743110 00
Q ss_pred ----------------------------------------------cceeeccccccccccCCCCCCchhhHHHHHHHHH
Q 040812 195 ----------------------------------------------GYSCLYESGEARHRKHGGYNGFAADIWSFGVTMM 228 (300)
Q Consensus 195 ----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ 228 (300)
.++..+.+||+... ....++++||||.|||+.
T Consensus 192 s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k--~~~QttaiDiws~GVI~L 269 (418)
T KOG1167|consen 192 SRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFR--CPRQTTAIDIWSAGVILL 269 (418)
T ss_pred hhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhh--ccCcCCccceeeccceee
Confidence 11122233333221 122356899999999999
Q ss_pred HHHhCCCCCCCCCCCchHH-HHHHHHh----------hCC------------------------------------CCCC
Q 040812 229 ELYMGYYPFLEPGQEPDFL-SLMLAIC----------FRE------------------------------------PPSL 261 (300)
Q Consensus 229 elltg~~pf~~~~~~~~~~-~~~~~~~----------~~~------------------------------------~~~~ 261 (300)
-+++++.||.....+.+.. ++..... .+. ....
T Consensus 270 slls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~ 349 (418)
T KOG1167|consen 270 SLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIG 349 (418)
T ss_pred hhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeeccc
Confidence 9999999997554332211 1111000 000 0000
Q ss_pred CCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 262 PECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 262 ~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
.+..+..+.+|+.+||.. ||.+|.|++++|+||||.+
T Consensus 350 ~d~~~~~~~dlLdk~le~-np~kRitAEeALkHpFF~~ 386 (418)
T KOG1167|consen 350 SDVFPALLLDLLDKCLEL-NPQKRITAEDALKHPFFDE 386 (418)
T ss_pred cccccHHHHHHHHHHccC-ChhhcccHHHHhcCcCCcc
Confidence 112244789999999999 9999999999999999975
No 396
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-34 Score=229.73 Aligned_cols=236 Identities=26% Similarity=0.387 Sum_probs=179.0
Q ss_pred ceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCC----CCCCCHHHHHHHHhcCCCceeEeceeeeCCCC----cEEE
Q 040812 59 LEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDR----GTPPNPQELNILRQTNSPYIVKCHQIFTKPSG----EVSI 130 (300)
Q Consensus 59 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~----~~~l 130 (300)
.+--+.||.|+||.||.+.+..+|+.||+|.+.+-. ....+-+|+++|..++|.|++..+++...+.- .+|+
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 355688999999999999999999999999875422 22334579999999999999999998765431 3788
Q ss_pred EEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccceee-----------
Q 040812 131 LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCL----------- 199 (300)
Q Consensus 131 v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~~----------- 199 (300)
+.|++.. +|...+.....++.+.++-+++||+.||+|||+.+|.||||||.|.|++++-..++.++++
T Consensus 135 ~TELmQS-DLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~h 213 (449)
T KOG0664|consen 135 LTELMQS-DLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLN 213 (449)
T ss_pred HHHHHHh-hhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhhhh
Confidence 9999966 9999998888999999999999999999999999999999999999999985543333222
Q ss_pred ---------ccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHH------------h----
Q 040812 200 ---------YESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAI------------C---- 254 (300)
Q Consensus 200 ---------~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~------------~---- 254 (300)
|.+||..-. ...|+.++||||+|||+.|++.++..|...+..+.. +.+... .
T Consensus 214 MTqEVVTQYYRAPEiLMG--aRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL-~lItdLLGTPs~EaMr~ACEGAk 290 (449)
T KOG0664|consen 214 MTHEVVTQYYRAPELLMG--ARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQL-QMIIDLLGTPSQEAMKYACEGAK 290 (449)
T ss_pred hHHHHHHHHhccHHHhhc--chhhcCccceehhhHHHHHHHhhhhhhhccChHHHH-HHHHHHhCCCcHHHHHHHhhhhH
Confidence 333333221 234677999999999999999999999654433221 111111 1
Q ss_pred ---hCC---CCCCC--------CCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 255 ---FRE---PPSLP--------ECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 255 ---~~~---~~~~~--------~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
.+. .++++ ..-..+..+++..++.. ||.+|.+.++++.|+++.+
T Consensus 291 ~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~-d~dkris~~~A~~~~~~~e 348 (449)
T KOG0664|consen 291 NHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHF-DPDKRISVEEALQHRYLEE 348 (449)
T ss_pred HHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCC-CCcccccHhhhcccccccc
Confidence 111 12221 12234677889999999 9999999999999999864
No 397
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=4.7e-33 Score=252.07 Aligned_cols=225 Identities=24% Similarity=0.298 Sum_probs=165.7
Q ss_pred eeeeecCCcceE-EEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHhc-CCCceeEeceeeeCCCCcEEEEEeccCCC
Q 040812 61 KLQVLGQGNGGT-VFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQT-NSPYIVKCHQIFTKPSGEVSILMEYMDAG 138 (300)
Q Consensus 61 ~~~~lg~G~~g~-V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~lv~e~~~~~ 138 (300)
--+.+|.|+-|+ ||+|... ++.||||.+-.+.. .-..+|+..|+.- .|||||++++.-. +....||..|+|..
T Consensus 513 ~~eilG~Gs~Gt~Vf~G~ye--~R~VAVKrll~e~~-~~A~rEi~lL~eSD~H~NviRyyc~E~-d~qF~YIalELC~~- 587 (903)
T KOG1027|consen 513 PKEILGYGSNGTVVFRGVYE--GREVAVKRLLEEFF-DFAQREIQLLQESDEHPNVIRYYCSEQ-DRQFLYIALELCAC- 587 (903)
T ss_pred cHHHcccCCCCcEEEEEeeC--CceehHHHHhhHhH-HHHHHHHHHHHhccCCCceEEEEeecc-CCceEEEEehHhhh-
Confidence 346789999886 5999987 68999998754332 1236799999876 7999999999744 45589999999976
Q ss_pred CHHHHHHhCC-C---CCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCC---CCC-------------------
Q 040812 139 SLEIYVKSRG-R---LSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEK---MEH------------------- 192 (300)
Q Consensus 139 ~L~~~l~~~~-~---l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~---~~~------------------- 192 (300)
+|.++++..+ . ......+.++.|+++||++||+.+|+||||||.||||+.. +..
T Consensus 588 sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS 667 (903)
T KOG1027|consen 588 SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSS 667 (903)
T ss_pred hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcch
Confidence 9999998741 1 1224568899999999999999999999999999999862 211
Q ss_pred -----CccceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCC
Q 040812 193 -----PCGYSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMG-YYPFLEPGQEPDFLSLMLAICFREPPSLPECSS 266 (300)
Q Consensus 193 -----~~~~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (300)
.+.++..|.+||..... ....++||+||||++|+.++| ..||......+ .+++.... .-..+.....
T Consensus 668 ~~r~s~~sGt~GW~APE~L~~~---~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~--~NIl~~~~--~L~~L~~~~d 740 (903)
T KOG1027|consen 668 FSRLSGGSGTSGWQAPEQLRED---RKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ--ANILTGNY--TLVHLEPLPD 740 (903)
T ss_pred hhcccCCCCcccccCHHHHhcc---ccCcccchhhcCceEEEEecCCccCCCchHHhh--hhhhcCcc--ceeeeccCch
Confidence 12345557777766533 345589999999999999996 99997543221 12221110 0001111111
Q ss_pred hHHHHHHHHHhccCCCCCCCCHHHHhcCCCCC
Q 040812 267 EKFRDFIRCCLQKGDPSKRWTASQLLSHPFLA 298 (300)
Q Consensus 267 ~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~ 298 (300)
.+..|||.+|+.. +|..||++.++|.||+|=
T Consensus 741 ~eA~dLI~~ml~~-dP~~RPsa~~VL~HPlFW 771 (903)
T KOG1027|consen 741 CEAKDLISRMLNP-DPQLRPSATDVLNHPLFW 771 (903)
T ss_pred HHHHHHHHHhcCC-CcccCCCHHHHhCCCccC
Confidence 2899999999999 999999999999999994
No 398
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-31 Score=234.29 Aligned_cols=186 Identities=26% Similarity=0.334 Sum_probs=156.8
Q ss_pred CccCCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC----------CCCHHHHHHHHhcC---CCceeEe
Q 040812 51 QEIDGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT----------PPNPQELNILRQTN---SPYIVKC 117 (300)
Q Consensus 51 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----------~~~~~E~~~l~~l~---h~niv~~ 117 (300)
.......+|..++.+|+|+||.|++|.++++...|+||.+.+++.. ....-|+++|..++ |+||+++
T Consensus 555 ~~~~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKl 634 (772)
T KOG1152|consen 555 KEYKKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKL 634 (772)
T ss_pred eeecccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhh
Confidence 3445678899999999999999999999999999999999765422 12345999999997 9999999
Q ss_pred ceeeeCCCCcEEEEEecc-CCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCC---
Q 040812 118 HQIFTKPSGEVSILMEYM-DAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHP--- 193 (300)
Q Consensus 118 ~~~~~~~~~~~~lv~e~~-~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~--- 193 (300)
+++|+++. +.||+||-. +|.+|+++++...++++.+++.|++|++.|+++||++||+|||||-+|+.++.++-.+
T Consensus 635 LdfFEddd-~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klid 713 (772)
T KOG1152|consen 635 LDFFEDDD-YYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLID 713 (772)
T ss_pred hheeecCC-eeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEee
Confidence 99999865 999999975 5689999999999999999999999999999999999999999999999999875431
Q ss_pred --------------ccceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 040812 194 --------------CGYSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLE 239 (300)
Q Consensus 194 --------------~~~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~ 239 (300)
+.++.-|.+||.... ..+-+..-|||++|++||.++..+.||.+
T Consensus 714 fgsaa~~ksgpfd~f~gtv~~aapevl~g--~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 714 FGSAAYTKSGPFDVFVGTVDYAAPEVLGG--EKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred ccchhhhcCCCcceeeeeccccchhhhCC--CccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 223444666666542 23457789999999999999999999964
No 399
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=7.6e-31 Score=224.55 Aligned_cols=232 Identities=23% Similarity=0.325 Sum_probs=170.0
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHH--HhcCCCceeEeceeeeCC---CCcEE
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNIL--RQTNSPYIVKCHQIFTKP---SGEVS 129 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l--~~l~h~niv~~~~~~~~~---~~~~~ 129 (300)
++...++.+.||+|+||.||+|+.. ++.||||++.... ...+.+|-++. -.++|+||+++++.-... ....+
T Consensus 208 ~l~pl~l~eli~~Grfg~V~KaqL~--~~~VAVKifp~~~-kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eyw 284 (534)
T KOG3653|consen 208 ELDPLQLLELIGRGRFGCVWKAQLD--NRLVAVKIFPEQE-KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYW 284 (534)
T ss_pred cCCchhhHHHhhcCccceeehhhcc--CceeEEEecCHHH-HHHHHhHHHHHhccCccchhHHHhhchhccCCcccccee
Confidence 4556788999999999999999987 5899999986433 23445555554 467999999999974321 12589
Q ss_pred EEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhC---------CccccCCCCCceeecCCCCCC---cc--
Q 040812 130 ILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSR---------NIVHRDIKPANVLINEKMEHP---CG-- 195 (300)
Q Consensus 130 lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~---------~i~H~Dlkp~Nill~~~~~~~---~~-- 195 (300)
||++|.+.|+|.+|++.+ .+++....+++..|++||+|||+. .|+|||||..|||+..++.+- +|
T Consensus 285 LVt~fh~kGsL~dyL~~n-tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLA 363 (534)
T KOG3653|consen 285 LVTEFHPKGSLCDYLKAN-TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLA 363 (534)
T ss_pred EEeeeccCCcHHHHHHhc-cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecccee
Confidence 999999999999999875 689999999999999999999964 499999999999999886542 22
Q ss_pred ----------------ceeeccccccccccCCCC---CCchhhHHHHHHHHHHHHhCCCCC------------C-CCCCC
Q 040812 196 ----------------YSCLYESGEARHRKHGGY---NGFAADIWSFGVTMMELYMGYYPF------------L-EPGQE 243 (300)
Q Consensus 196 ----------------~~~~~~~~~~~~~~~~~~---~~~~~DiwSlG~il~elltg~~pf------------~-~~~~~ 243 (300)
++..|++||..+....-. .-.+.||||+|.+||||+++..-+ . .....
T Consensus 364 l~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~h 443 (534)
T KOG3653|consen 364 LRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNH 443 (534)
T ss_pred EEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCC
Confidence 356688888776432111 124789999999999999864333 2 11112
Q ss_pred chHHHHHH-HHhhCCCCCCCCCC-----ChHHHHHHHHHhccCCCCCCCCHHHH
Q 040812 244 PDFLSLML-AICFREPPSLPECS-----SEKFRDFIRCCLQKGDPSKRWTASQL 291 (300)
Q Consensus 244 ~~~~~~~~-~~~~~~~~~~~~~~-----~~~l~~li~~~l~~~dp~~Rpt~~~~ 291 (300)
+...+... .+..+.+|.+|+.+ ...+++.+..||.. ||+.|.|+.-+
T Consensus 444 Pt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDh-DaeARLTA~Cv 496 (534)
T KOG3653|consen 444 PTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDH-DAEARLTAGCV 496 (534)
T ss_pred CCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCC-chhhhhhhHHH
Confidence 22211111 13345556666543 35689999999999 99999997644
No 400
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=2.9e-30 Score=199.42 Aligned_cols=203 Identities=28% Similarity=0.486 Sum_probs=154.9
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCC---CHHHHHHHHh-cCCCceeEeceeeeCCCCcEEEE
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPP---NPQELNILRQ-TNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~---~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~lv 131 (300)
.+....+..||+|+||.|-+.++..+|...|+|.+......+. ..+|+.+..+ ...|.+|.++|.+-.+ +.+|+.
T Consensus 45 ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~re-gdvwIc 123 (282)
T KOG0984|consen 45 ADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFRE-GDVWIC 123 (282)
T ss_pred hhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhcc-ccEEEe
Confidence 3456677899999999999999999999999999876544322 1345555433 4679999999987765 589999
Q ss_pred EeccCCCCHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHhHhC-CccccCCCCCceeecCCCCCCc---c--------
Q 040812 132 MEYMDAGSLEIYVK----SRGRLSEDIICTISRQVLKGLFYMHSR-NIVHRDIKPANVLINEKMEHPC---G-------- 195 (300)
Q Consensus 132 ~e~~~~~~L~~~l~----~~~~l~~~~~~~i~~qi~~~l~~lH~~-~i~H~Dlkp~Nill~~~~~~~~---~-------- 195 (300)
||.|.. +|..+-. .++.+++..+-+|+..++.||.|||++ .++|||+||+|||++..+..++ |
T Consensus 124 ME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dS 202 (282)
T KOG0984|consen 124 MELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDS 202 (282)
T ss_pred HHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhh
Confidence 999965 8876554 466899999999999999999999976 8999999999999999877532 2
Q ss_pred -------ceeeccccccccccCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCC
Q 040812 196 -------YSCLYESGEARHRKHG-GYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPE 263 (300)
Q Consensus 196 -------~~~~~~~~~~~~~~~~-~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (300)
+..-|++||-...... ..|+-++||||||++++||.+++.||...... .+.+.++.....|.+|.
T Consensus 203 iAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tp---F~qLkqvVeep~P~Lp~ 275 (282)
T KOG0984|consen 203 IAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTP---FQQLKQVVEEPSPQLPA 275 (282)
T ss_pred hHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCH---HHHHHHHhcCCCCCCcc
Confidence 2333677776543322 25778999999999999999999999766543 23444445455555553
No 401
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.97 E-value=3e-29 Score=203.80 Aligned_cols=190 Identities=39% Similarity=0.608 Sum_probs=160.1
Q ss_pred ecCCcceEEEEEEEccCCeEEEEEEeecCCCC---CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEeccCCCCHH
Q 040812 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGT---PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLE 141 (300)
Q Consensus 65 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~~~L~ 141 (300)
||+|++|.||++....+++.+++|++...... ..+.+|+..++.++|++++++++++... ...+++||++.+++|.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-~~~~~~~e~~~~~~l~ 79 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDE-NHLYLVMEYCEGGSLK 79 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecC-CeEEEEEecCCCCcHH
Confidence 68999999999999988999999998766543 4567899999999999999999998875 4899999999989999
Q ss_pred HHHHhC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecC-CCCCCccce-------------------eec
Q 040812 142 IYVKSR-GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINE-KMEHPCGYS-------------------CLY 200 (300)
Q Consensus 142 ~~l~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~-~~~~~~~~~-------------------~~~ 200 (300)
+++... ..++...+..++.+++.++.+||+.|++|+||+|.||+++. +....+.++ ..|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~ 159 (215)
T cd00180 80 DLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAY 159 (215)
T ss_pred HHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCCc
Confidence 999875 46899999999999999999999999999999999999998 544322221 112
Q ss_pred cccccccccCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHhcc
Q 040812 201 ESGEARHRKHGG-YNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQK 279 (300)
Q Consensus 201 ~~~~~~~~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~ 279 (300)
.+|+... .. ..+.++|+|++|+++++| ..+.+++..|+..
T Consensus 160 ~~pe~~~---~~~~~~~~~D~~~lg~~~~~l------------------------------------~~~~~~l~~~l~~ 200 (215)
T cd00180 160 MAPEVLL---GKGYYSEKSDIWSLGVILYEL------------------------------------PELKDLIRKMLQK 200 (215)
T ss_pred cChhHhc---ccCCCCchhhhHHHHHHHHHH------------------------------------HHHHHHHHHHhhC
Confidence 2233222 22 556789999999999999 6788999999999
Q ss_pred CCCCCCCCHHHHhcCC
Q 040812 280 GDPSKRWTASQLLSHP 295 (300)
Q Consensus 280 ~dp~~Rpt~~~~l~hp 295 (300)
||++||++.++++|+
T Consensus 201 -~p~~R~~~~~l~~~~ 215 (215)
T cd00180 201 -DPEKRPSAKEILEHL 215 (215)
T ss_pred -CcccCcCHHHHhhCC
Confidence 999999999999885
No 402
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.96 E-value=3.7e-30 Score=206.46 Aligned_cols=242 Identities=22% Similarity=0.278 Sum_probs=172.7
Q ss_pred CCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-CCCHHHHHHHHhc-CCCceeEeceeeeCCCCcEEEE
Q 040812 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-PPNPQELNILRQT-NSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 54 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~lv 131 (300)
+-.+.|.+.+.||+|.||.+-+|.++.+...+++|.+...... .+|.+|...--.| -|.||+.-+++.-...+...++
T Consensus 21 ~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~ 100 (378)
T KOG1345|consen 21 DLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFV 100 (378)
T ss_pred chhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEe
Confidence 3456799999999999999999999999999999998764432 3445565544444 4789998887644444588899
Q ss_pred EeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCC-----Cccc------e---
Q 040812 132 MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEH-----PCGY------S--- 197 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~-----~~~~------~--- 197 (300)
+||++.|+|..-+... .+.+...+.++.|+++|+.|+|+++++|||||.+||||-..... ++|. +
T Consensus 101 qE~aP~gdL~snv~~~-GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~ 179 (378)
T KOG1345|consen 101 QEFAPRGDLRSNVEAA-GIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKY 179 (378)
T ss_pred eccCccchhhhhcCcc-cccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCceehh
Confidence 9999999999888764 47889999999999999999999999999999999998643211 1221 1
Q ss_pred ----eeccccccccccCCCC--CCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCC---CCChH
Q 040812 198 ----CLYESGEARHRKHGGY--NGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPE---CSSEK 268 (300)
Q Consensus 198 ----~~~~~~~~~~~~~~~~--~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 268 (300)
..|.+|+.......+. ..+.+|+|.||+++|.++||.+||..........-...+...+..+..|. ..++.
T Consensus 180 ~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~ 259 (378)
T KOG1345|consen 180 LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEK 259 (378)
T ss_pred hhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhhcccCHH
Confidence 1133343332221111 24578999999999999999999975433322222222333344444444 45788
Q ss_pred HHHHHHHHhccCCCCCC---CCHHHHhcCCCC
Q 040812 269 FRDFIRCCLQKGDPSKR---WTASQLLSHPFL 297 (300)
Q Consensus 269 l~~li~~~l~~~dp~~R---pt~~~~l~hpw~ 297 (300)
+..+.++-|.. ++++| -++..-.+..|.
T Consensus 260 a~r~Fkk~lt~-~~~drcki~~~kk~rk~~w~ 290 (378)
T KOG1345|consen 260 ALRLFKKSLTP-RFKDRCKIWTAKKMRKCLWK 290 (378)
T ss_pred HHHHHHHhcCC-cccccchhHHHHHHHHHHHH
Confidence 99999999999 99999 344444444443
No 403
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.96 E-value=1.8e-29 Score=243.62 Aligned_cols=182 Identities=20% Similarity=0.259 Sum_probs=130.9
Q ss_pred HhcCC-CceeEeceeeeCC------CCcEEEEEeccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccC
Q 040812 107 RQTNS-PYIVKCHQIFTKP------SGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHRD 178 (300)
Q Consensus 107 ~~l~h-~niv~~~~~~~~~------~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~D 178 (300)
+.++| .||++++++|... ...++++||++. ++|.+++.. ...+++..++.++.||+.||.|||++||+|||
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrD 105 (793)
T PLN00181 27 KSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECED-VSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHN 105 (793)
T ss_pred chhhHHHHHHHhhcccCCccccccccchhhhhhccCC-ccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence 34555 5788888876211 125778899884 599999975 34599999999999999999999999999999
Q ss_pred CCCCceeecCCC-------------------CC---Ccc--------------------------------ceeeccccc
Q 040812 179 IKPANVLINEKM-------------------EH---PCG--------------------------------YSCLYESGE 204 (300)
Q Consensus 179 lkp~Nill~~~~-------------------~~---~~~--------------------------------~~~~~~~~~ 204 (300)
|||+||||+..+ .. ++| ++..|++||
T Consensus 106 lKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 185 (793)
T PLN00181 106 VRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPE 185 (793)
T ss_pred CCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChh
Confidence 999999995311 11 111 122367777
Q ss_pred cccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHhccCCCCC
Q 040812 205 ARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSK 284 (300)
Q Consensus 205 ~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~dp~~ 284 (300)
... +..++.++|||||||+||||++|.+|+..... ..... .....+...........+++.+||.. ||.+
T Consensus 186 ~~~---~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~~~~~L~~-~P~~ 255 (793)
T PLN00181 186 EDN---GSSSNCASDVYRLGVLLFELFCPVSSREEKSR---TMSSL---RHRVLPPQILLNWPKEASFCLWLLHP-EPSC 255 (793)
T ss_pred hhc---cCCCCchhhhhhHHHHHHHHhhCCCchhhHHH---HHHHH---HHhhcChhhhhcCHHHHHHHHHhCCC-Chhh
Confidence 654 55678899999999999999999888743211 11111 11111111112245677899999999 9999
Q ss_pred CCCHHHHhcCCCCCC
Q 040812 285 RWTASQLLSHPFLAD 299 (300)
Q Consensus 285 Rpt~~~~l~hpw~~~ 299 (300)
||++.|+++||||.+
T Consensus 256 Rps~~eil~h~~~~~ 270 (793)
T PLN00181 256 RPSMSELLQSEFINE 270 (793)
T ss_pred CcChHHHhhchhhhh
Confidence 999999999999964
No 404
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.96 E-value=8.8e-28 Score=197.82 Aligned_cols=178 Identities=36% Similarity=0.518 Sum_probs=147.1
Q ss_pred ceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCC---CCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEecc
Q 040812 59 LEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG---TPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYM 135 (300)
Q Consensus 59 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~ 135 (300)
|.+.+.||+|++|.||++....+++.+|+|.+..... ...+.+|+..+++++|+|++++++.+.... ..++++|++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~-~~~~v~e~~ 79 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPE-PLYLVMEYC 79 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCC-ceEEEEecc
Confidence 5678899999999999999998899999999876542 234467999999999999999999987654 899999999
Q ss_pred CCCCHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc------------------
Q 040812 136 DAGSLEIYVKSRGR-LSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY------------------ 196 (300)
Q Consensus 136 ~~~~L~~~l~~~~~-l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~------------------ 196 (300)
++++|.+++..... +++..+..++.+++.++.+||+++++|+||+|+||+++.+....+.+
T Consensus 80 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 159 (225)
T smart00221 80 EGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTV 159 (225)
T ss_pred CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccce
Confidence 99999999987666 89999999999999999999999999999999999999764432211
Q ss_pred --eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 040812 197 --SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLE 239 (300)
Q Consensus 197 --~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~ 239 (300)
...|.+|+... .....+.++|+||||+++++|++|+.||..
T Consensus 160 ~~~~~~~~pe~~~--~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 160 KGTPFYLAPEVLL--GGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred eccCCcCCHhHhc--CCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 11233444332 234556699999999999999999999954
No 405
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.94 E-value=1.2e-26 Score=184.50 Aligned_cols=151 Identities=27% Similarity=0.332 Sum_probs=112.3
Q ss_pred CCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCc-c-----------ceeeccccc
Q 040812 138 GSLEIYVKSR-GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPC-G-----------YSCLYESGE 204 (300)
Q Consensus 138 ~~L~~~l~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~-~-----------~~~~~~~~~ 204 (300)
|+|.+++..+ ..+++..++.++.||+.||.|||+++ ||+|||++.++.... | ++..|.+||
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~fG~~~~~~~~~~~g~~~y~aPE 74 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKLDGSVAFKTPEQSRVDPYFMAPE 74 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceeeccceEeeccccCCCcccccChH
Confidence 6899999874 45999999999999999999999998 999999987654321 1 234567777
Q ss_pred cccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCC-CC--CCCCCCCh--HHHHHHHHHhcc
Q 040812 205 ARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFRE-PP--SLPECSSE--KFRDFIRCCLQK 279 (300)
Q Consensus 205 ~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~--~l~~li~~~l~~ 279 (300)
... +..++.++|||||||++|||+||+.||.................... +. ..+...++ .+.++|.+||..
T Consensus 75 ~~~---~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~ 151 (176)
T smart00750 75 VIQ---GQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCASR 151 (176)
T ss_pred Hhc---CCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHhc
Confidence 654 55678899999999999999999999965443322222221111111 10 11122333 699999999999
Q ss_pred CCCCCCCCHHHHhcCCCCC
Q 040812 280 GDPSKRWTASQLLSHPFLA 298 (300)
Q Consensus 280 ~dp~~Rpt~~~~l~hpw~~ 298 (300)
||++||++.++++|+|+.
T Consensus 152 -~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 152 -LPQRREAANHYLAHCRAL 169 (176)
T ss_pred -ccccccCHHHHHHHHHHH
Confidence 999999999999999864
No 406
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.93 E-value=1.1e-23 Score=183.02 Aligned_cols=233 Identities=21% Similarity=0.211 Sum_probs=167.8
Q ss_pred cceeeeeecCCcceEEEEEEEccCC-eEEEEEEeecCCCCC--CCHHHHHHHHhcCC----CceeEeceeeeCCCCcEEE
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTL-ALYALKVMQCDRGTP--PNPQELNILRQTNS----PYIVKCHQIFTKPSGEVSI 130 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~-~~vaiK~~~~~~~~~--~~~~E~~~l~~l~h----~niv~~~~~~~~~~~~~~l 130 (300)
+|.+.+.||+|+||.||+|.+..++ ..+|+|+........ ....|+.++..++. .++..+++.......+.|+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 8999999999999999999998764 689999987654332 45679999998873 5788888877423448999
Q ss_pred EEeccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCC--------CCccceeec
Q 040812 131 LMEYMDAGSLEIYVKSR--GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKME--------HPCGYSCLY 200 (300)
Q Consensus 131 v~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~--------~~~~~~~~~ 200 (300)
||+.+ |.+|.++.... +.|+..++..|+.|++.+|++||+.|++||||||+|+++..... .++|....+
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~ 177 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRF 177 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccc
Confidence 99999 67999988653 57999999999999999999999999999999999999986531 133333311
Q ss_pred c----------cccc---cc----------ccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCC
Q 040812 201 E----------SGEA---RH----------RKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFRE 257 (300)
Q Consensus 201 ~----------~~~~---~~----------~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 257 (300)
. .+.. .. ...+...+.+.|+||++.++.|++.|..||....................
T Consensus 178 ~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~~ 257 (322)
T KOG1164|consen 178 KYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKLL 257 (322)
T ss_pred cccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhhc
Confidence 1 0000 00 01123345688999999999999999999976554333222222111111
Q ss_pred CCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHh
Q 040812 258 PPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLL 292 (300)
Q Consensus 258 ~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l 292 (300)
........+..+.++...+-.. +...+|....+.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~Pdy~~~~ 291 (322)
T KOG1164|consen 258 TDRFGDLKPEEFAKILEYIDSL-DYEDKPDYEKLA 291 (322)
T ss_pred cccccCCChHHHHHHHHHhhcc-CCcCCCCHHHHH
Confidence 1113444567778887777777 889999877664
No 407
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.92 E-value=1.1e-24 Score=172.32 Aligned_cols=186 Identities=21% Similarity=0.235 Sum_probs=147.3
Q ss_pred CCCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHhcCC-CceeEeceeeeCCCCcEEEEE
Q 040812 54 DGLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNS-PYIVKCHQIFTKPSGEVSILM 132 (300)
Q Consensus 54 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~~lv~ 132 (300)
.-.+.|.++++||+|+||.+|+|....+|+.||||+..+........-|..+.+.+++ .+|..+..+..+ ..+..+||
T Consensus 12 iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e-~~ynvlVM 90 (341)
T KOG1163|consen 12 IVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYGTE-KDYNVLVM 90 (341)
T ss_pred eeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhhccc-cccceeee
Confidence 3457899999999999999999999999999999998877777777789999999987 566666665544 44889999
Q ss_pred eccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCC------Cccceeecccccc
Q 040812 133 EYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEH------PCGYSCLYESGEA 205 (300)
Q Consensus 133 e~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~------~~~~~~~~~~~~~ 205 (300)
|++ |-+|+++..- ..+|+..+++.++-|++.-++|+|.++++||||||+|+|+.-+..+ ++|.++.|.....
T Consensus 91 dLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t 169 (341)
T KOG1163|consen 91 DLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRT 169 (341)
T ss_pred ecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhccccc
Confidence 999 6799998874 4479999999999999999999999999999999999999755332 3444444333221
Q ss_pred cc--------------------ccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 040812 206 RH--------------------RKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPG 241 (300)
Q Consensus 206 ~~--------------------~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 241 (300)
.. ...|...+..-|+-|+|.+|.++.-|..||.+..
T Consensus 170 ~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglk 225 (341)
T KOG1163|consen 170 RQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLK 225 (341)
T ss_pred cccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccc
Confidence 11 0011223446799999999999999999997654
No 408
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.92 E-value=1.2e-26 Score=214.17 Aligned_cols=235 Identities=26% Similarity=0.346 Sum_probs=171.3
Q ss_pred eeeeecCCcceEEEEEEEccCCeEEEEEEeecC----CCCCC----CHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEE
Q 040812 61 KLQVLGQGNGGTVFKVRHKQTLALYALKVMQCD----RGTPP----NPQELNILRQTNSPYIVKCHQIFTKPSGEVSILM 132 (300)
Q Consensus 61 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~----~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~ 132 (300)
..+.+|.|.+|.|+.+......+.++.|.+... ..... ...|+.+-..+.|+|++..+..+.+-.+ ..-+|
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~-~~~~m 400 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDG-ILQSM 400 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhccc-chhhh
Confidence 467899999999999888777777777765421 10000 1235555567899999887777655443 33449
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCc---c--------------
Q 040812 133 EYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPC---G-------------- 195 (300)
Q Consensus 133 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~---~-------------- 195 (300)
|||++ +|..++...+.++..++..+++|++.||+|+|+.||.|||+|++|++++.++..++ |
T Consensus 401 E~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~ 479 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIH 479 (601)
T ss_pred hcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcchhhh
Confidence 99999 99999998888999999999999999999999999999999999999998754321 1
Q ss_pred ------ceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHH----HhhCCCCCCCCCC
Q 040812 196 ------YSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLA----ICFREPPSLPECS 265 (300)
Q Consensus 196 ------~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 265 (300)
+..-|.+||.... ..+....+||||.|++++.|.+|+.||.......+....... .....+..+...+
T Consensus 480 ~~~g~~gS~pY~apE~~~~--~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 557 (601)
T KOG0590|consen 480 ESSGIVGSDPYLAPEVLTG--KEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLL 557 (601)
T ss_pred hhcCcccCCcCcCcccccc--cccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhc
Confidence 1222334443321 223455799999999999999999999766554433211111 0111122334456
Q ss_pred ChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCCC
Q 040812 266 SEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLADA 300 (300)
Q Consensus 266 ~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~~ 300 (300)
+...+.+|.+||+. ||.+|.|+++|++.+||+.+
T Consensus 558 p~~~~~~~~~~l~~-~P~~R~ti~~i~~d~W~~~i 591 (601)
T KOG0590|consen 558 PRETRIIIYRMLQL-DPTKRITIEQILNDEWIRSI 591 (601)
T ss_pred hhhHHHHHHHHccC-ChhheecHHHHhhChHhhhc
Confidence 78889999999999 99999999999999999864
No 409
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.92 E-value=3.6e-25 Score=178.19 Aligned_cols=230 Identities=23% Similarity=0.332 Sum_probs=185.0
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecC----CCCCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEE
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCD----RGTPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv 131 (300)
.++..++-+|.+.-.|..|+|+|.++ .++.|++... +....|..|.-.|+.+.||||+.+++.+..+. ++.++
T Consensus 189 ~~~lnl~tkl~e~hsgelwrgrwqgn--divakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnspp-nlv~i 265 (448)
T KOG0195|consen 189 VSSLNLITKLAESHSGELWRGRWQGN--DIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPP-NLVII 265 (448)
T ss_pred hhhhhhhhhhccCCCcccccccccCc--chhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCC-CceEe
Confidence 44566778899999999999999864 4566777543 34456778999999999999999999998876 78999
Q ss_pred EeccCCCCHHHHHHhCCC--CCHHHHHHHHHHHHHHHHHhHhCC--ccccCCCCCceeecCCCCCCcc------------
Q 040812 132 MEYMDAGSLEIYVKSRGR--LSEDIICTISRQVLKGLFYMHSRN--IVHRDIKPANVLINEKMEHPCG------------ 195 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~~~~--l~~~~~~~i~~qi~~~l~~lH~~~--i~H~Dlkp~Nill~~~~~~~~~------------ 195 (300)
..|++.|+|...++.... .+..++..++..|+.|+.|||+-. |.---|....+++|++....+.
T Consensus 266 sq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfqe~g 345 (448)
T KOG0195|consen 266 SQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVG 345 (448)
T ss_pred eeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeeeccc
Confidence 999999999999987543 678899999999999999999864 4555788899999987554221
Q ss_pred --ceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHH
Q 040812 196 --YSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFI 273 (300)
Q Consensus 196 --~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 273 (300)
....|.+||+.........-.++|+|||.+++||+.|++.||.+....+-- ++....+....+|...+..+..+|
T Consensus 346 r~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecg---mkialeglrv~ippgis~hm~klm 422 (448)
T KOG0195|consen 346 RAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECG---MKIALEGLRVHIPPGISRHMNKLM 422 (448)
T ss_pred cccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhh---hhhhhccccccCCCCccHHHHHHH
Confidence 245577888877655555556899999999999999999999765544332 233345777888999999999999
Q ss_pred HHHhccCCCCCCCCHHHHh
Q 040812 274 RCCLQKGDPSKRWTASQLL 292 (300)
Q Consensus 274 ~~~l~~~dp~~Rpt~~~~l 292 (300)
.-|+.. ||.+||.+..++
T Consensus 423 ~icmne-dpgkrpkfdmiv 440 (448)
T KOG0195|consen 423 NICMNE-DPGKRPKFDMIV 440 (448)
T ss_pred HHHhcC-CCCcCCCcceeh
Confidence 999999 999999987654
No 410
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.91 E-value=6.2e-24 Score=179.20 Aligned_cols=174 Identities=24% Similarity=0.331 Sum_probs=130.1
Q ss_pred CCCceeEeceeeeCC--------------------------CCcEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHH
Q 040812 110 NSPYIVKCHQIFTKP--------------------------SGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVL 163 (300)
Q Consensus 110 ~h~niv~~~~~~~~~--------------------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~ 163 (300)
+|||||++.+.|.++ ...+|+||.-... +|++++..+ ..+......++.|++
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~-~~s~r~~~~~laQlL 351 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTR-HRSYRTGRVILAQLL 351 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcC-CCchHHHHHHHHHHH
Confidence 599999998876321 1258999999976 999999765 467788889999999
Q ss_pred HHHHHhHhCCccccCCCCCceeecCCCC-----------------------------CCccceeeccccccccccCCCC-
Q 040812 164 KGLFYMHSRNIVHRDIKPANVLINEKME-----------------------------HPCGYSCLYESGEARHRKHGGY- 213 (300)
Q Consensus 164 ~~l~~lH~~~i~H~Dlkp~Nill~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~~- 213 (300)
+|+.|||.+||.|||+|.+|||+.-+.. .+.|+....++||......|..
T Consensus 352 Eav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~a 431 (598)
T KOG4158|consen 352 EAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNA 431 (598)
T ss_pred HHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCce
Confidence 9999999999999999999999854311 1334444455555544333321
Q ss_pred --CCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHH
Q 040812 214 --NGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTAS 289 (300)
Q Consensus 214 --~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~ 289 (300)
.-.++|.|+.|.+.||+++...||....+.- .+ ........-+.+|+.+++.+++++..+|+. ||++|++..
T Consensus 432 vvny~kAD~WA~GalaYEIfg~~NPFY~rGem~--L~-~r~Yqe~qLPalp~~vpp~~rqlV~~lL~r-~pskRvsp~ 505 (598)
T KOG4158|consen 432 VVNYEKADTWAAGALAYEIFGRSNPFYKRGEML--LD-TRTYQESQLPALPSRVPPVARQLVFDLLKR-DPSKRVSPN 505 (598)
T ss_pred eeccchhhhhhhhhhHHHHhccCCcccccchhe--ec-hhhhhhhhCCCCcccCChHHHHHHHHHhcC-CccccCCcc
Confidence 1138999999999999999999997633211 01 111223456778899999999999999999 999999854
No 411
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=3.9e-23 Score=170.62 Aligned_cols=182 Identities=19% Similarity=0.256 Sum_probs=150.1
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHhcCC-CceeEeceeeeCCCCcEEEEEeccC
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNS-PYIVKCHQIFTKPSGEVSILMEYMD 136 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~~lv~e~~~ 136 (300)
.|+++++||+|+||.++.|.+.-++++||||.............|....+.|.+ ++|...+.+.. +..+..||||++
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGq-eG~~NiLVidLL- 106 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQ-EGKYNILVIDLL- 106 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeeecc-ccchhhhhhhhh-
Confidence 689999999999999999999999999999998776666667789999988864 88888877544 444788999999
Q ss_pred CCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCC--------Cccceeecccccccc
Q 040812 137 AGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEH--------PCGYSCLYESGEARH 207 (300)
Q Consensus 137 ~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~--------~~~~~~~~~~~~~~~ 207 (300)
|-+|+++..- .++|+.+.+..++.|++.-++++|++.+|.|||||+|+||...+.. ++|..+.|..|+...
T Consensus 107 GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~Tkq 186 (449)
T KOG1165|consen 107 GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQ 186 (449)
T ss_pred CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccc
Confidence 6799999875 4479999999999999999999999999999999999999875443 566666666665321
Q ss_pred --------------------ccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 040812 208 --------------------RKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPG 241 (300)
Q Consensus 208 --------------------~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 241 (300)
...|..-+..-|+=|||-++++.|-|.+||.+..
T Consensus 187 HIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLK 240 (449)
T KOG1165|consen 187 HIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK 240 (449)
T ss_pred cCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccccc
Confidence 0113334557899999999999999999997654
No 412
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.91 E-value=4.2e-25 Score=205.85 Aligned_cols=220 Identities=23% Similarity=0.246 Sum_probs=163.5
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC---CCCH---HHHHHHHhcCCCceeEeceeeeCCCCcEEEE
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT---PPNP---QELNILRQTNSPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~---~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv 131 (300)
+|...+.||++.|=+|.+|++.+ | .|+||++-+.... .++. .|++ ...+++||++.+..+...++ ..|||
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~e-G-~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~k-AAylv 99 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDRE-G-LVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDK-AAYLV 99 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCC-c-eEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhH-HHHHH
Confidence 67888999999999999999987 4 4889998765432 2233 3444 55579999999988866654 78999
Q ss_pred EeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccce--------------
Q 040812 132 MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYS-------------- 197 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~-------------- 197 (300)
-+|..+ +|.+.+..+.-+..-+.+.|+.|++.||.-+|..||+|+|||.+||||++.....+.++
T Consensus 100 Rqyvkh-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPa 178 (1431)
T KOG1240|consen 100 RQYVKH-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPA 178 (1431)
T ss_pred HHHHhh-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCcc
Confidence 999977 99999998877889999999999999999999999999999999999997654322221
Q ss_pred ------------eeccccccccccC--------CCCCCchhhHHHHHHHHHHHHh-CCCCCCCC-------CCCchHHHH
Q 040812 198 ------------CLYESGEARHRKH--------GGYNGFAADIWSFGVTMMELYM-GYYPFLEP-------GQEPDFLSL 249 (300)
Q Consensus 198 ------------~~~~~~~~~~~~~--------~~~~~~~~DiwSlG~il~ellt-g~~pf~~~-------~~~~~~~~~ 249 (300)
..|.+||-..... ....+++-||||+||+++||++ |++||.-. ....+....
T Consensus 179 df~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~~~~~e~~ 258 (1431)
T KOG1240|consen 179 DFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGNADDPEQL 258 (1431)
T ss_pred cceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccCccCHHHH
Confidence 1244444332211 1113568899999999999987 78888310 000011111
Q ss_pred HHHHhhCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcC
Q 040812 250 MLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~h 294 (300)
+ ....+..++++|..|++. ||++|.++++.|+-
T Consensus 259 L-----------e~Ied~~~Rnlil~Mi~r-dPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 259 L-----------EKIEDVSLRNLILSMIQR-DPSKRLSAEDYLQK 291 (1431)
T ss_pred H-----------HhCcCccHHHHHHHHHcc-CchhccCHHHHHHh
Confidence 1 111244789999999999 99999999999864
No 413
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.90 E-value=3.7e-22 Score=172.82 Aligned_cols=235 Identities=34% Similarity=0.500 Sum_probs=174.6
Q ss_pred ceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC-----CCHHHHHHHHhcCCC-ceeEeceeeeCCCCcEEEEE
Q 040812 59 LEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP-----PNPQELNILRQTNSP-YIVKCHQIFTKPSGEVSILM 132 (300)
Q Consensus 59 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----~~~~E~~~l~~l~h~-niv~~~~~~~~~~~~~~lv~ 132 (300)
|.+.+.||.|+||.||++.+. ..+++|.+....... .+.+|+.++..+.|+ +++++.+.+.... ..++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~ 77 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEG-SLYLVM 77 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCC-EEEEEE
Confidence 678899999999999999998 688999987655443 246799999999988 7999999985543 689999
Q ss_pred eccCCCCHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCC-C---Ccccee-------
Q 040812 133 EYMDAGSLEIYVKSRG---RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKME-H---PCGYSC------- 198 (300)
Q Consensus 133 e~~~~~~L~~~l~~~~---~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~-~---~~~~~~------- 198 (300)
+++.++++.+++.... .++...+..++.|++.++.++|+.+++|||+||+||+++.... . ++|...
T Consensus 78 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~ 157 (384)
T COG0515 78 EYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGS 157 (384)
T ss_pred ecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCc
Confidence 9999999998877664 7899999999999999999999999999999999999997652 2 233221
Q ss_pred ---------------eccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC---CchHHHHHHHHhhC-CCC
Q 040812 199 ---------------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQ---EPDFLSLMLAICFR-EPP 259 (300)
Q Consensus 199 ---------------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~---~~~~~~~~~~~~~~-~~~ 259 (300)
.|.+|+..........+...|+||+|++++++++|..||..... .......+...... ...
T Consensus 158 ~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (384)
T COG0515 158 TSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLAS 237 (384)
T ss_pred cccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCccccc
Confidence 12222222110004667799999999999999999999765443 12222222221111 111
Q ss_pred CCCCCC----ChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCC
Q 040812 260 SLPECS----SEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLA 298 (300)
Q Consensus 260 ~~~~~~----~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~ 298 (300)
...... ...+.+++..++.. +|..|.+..+...++|..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~ 279 (384)
T COG0515 238 PLSPSNPELISKAASDLLKKLLAK-DPKNRLSSSSDLSHDLLA 279 (384)
T ss_pred ccCccccchhhHHHHHHHHHHHhc-CchhcCCHHHHhhchHhh
Confidence 111111 25789999999999 999999999888776553
No 414
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.89 E-value=2.5e-23 Score=168.98 Aligned_cols=166 Identities=13% Similarity=0.154 Sum_probs=119.0
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCC-----------CHHHHHHHHhcCCCceeEeceeeeCC
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPP-----------NPQELNILRQTNSPYIVKCHQIFTKP 124 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-----------~~~E~~~l~~l~h~niv~~~~~~~~~ 124 (300)
-++|++.+.+|.|+||.||++.. ++..+|+|++........ +.+|+..+.+++|++|..+.+++...
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 36799999999999999999755 356899999975433222 35788899999999999988876533
Q ss_pred -------CCcEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCC--Ccc
Q 040812 125 -------SGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEH--PCG 195 (300)
Q Consensus 125 -------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~--~~~ 195 (300)
.+..++||||++|.+|.++.. +++ ....+++.+|..+|+.|++|||+||+||+++.++.. ++|
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~----~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~gi~liDfg 179 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE----ISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNGLRIIDLS 179 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh----ccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCCEEEEECC
Confidence 135899999999999988742 333 346699999999999999999999999999876511 112
Q ss_pred ceeecccccccc-ccCCCCCCchhhHHHHHHHHHHHH
Q 040812 196 YSCLYESGEARH-RKHGGYNGFAADIWSFGVTMMELY 231 (300)
Q Consensus 196 ~~~~~~~~~~~~-~~~~~~~~~~~DiwSlG~il~ell 231 (300)
....+....+.. ......+..++|+||||+++..+.
T Consensus 180 ~~~~~~e~~a~d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 180 GKRCTAQRKAKDRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CcccccchhhHHHHHHHhHhcccccccceeEeehHHH
Confidence 111111111100 001122346899999999987554
No 415
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.88 E-value=1.1e-22 Score=163.09 Aligned_cols=123 Identities=16% Similarity=0.158 Sum_probs=97.9
Q ss_pred eeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----------CCC-----------------HHHHHHHHhcCCCc
Q 040812 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----------PPN-----------------PQELNILRQTNSPY 113 (300)
Q Consensus 62 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----------~~~-----------------~~E~~~l~~l~h~n 113 (300)
...||+|+||.||+|.+. +|+.||+|+++..... ..+ .+|+..+.++.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 467999999999999997 7999999999764321 111 13899999998877
Q ss_pred eeEeceeeeCCCCcEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh-HhCCccccCCCCCceeecC
Q 040812 114 IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM-HSRNIVHRDIKPANVLINE 188 (300)
Q Consensus 114 iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~l-H~~~i~H~Dlkp~Nill~~ 188 (300)
+.....+ ... ..++||||++|+++.......+.++...+..++.|++.+|.++ |+.||+||||||+|||++.
T Consensus 81 v~~p~~~-~~~--~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~~ 153 (190)
T cd05147 81 IPCPEPI-LLK--SHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYHD 153 (190)
T ss_pred CCCCcEE-Eec--CCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEEC
Confidence 6443332 222 2389999999988766544456799999999999999999999 7999999999999999984
No 416
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.88 E-value=9e-23 Score=177.55 Aligned_cols=124 Identities=17% Similarity=0.159 Sum_probs=98.8
Q ss_pred CCcceeeeeecCCcceEEEEEEEcc-CCeEEEEEEeecCCC-------CCCCHHHHHHHHhcCCCceeE-eceeeeCCCC
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQ-TLALYALKVMQCDRG-------TPPNPQELNILRQTNSPYIVK-CHQIFTKPSG 126 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~-------~~~~~~E~~~l~~l~h~niv~-~~~~~~~~~~ 126 (300)
.++|++.+.||+|+||+||+|.+.. +++.+|||.+..... ...+.+|+.+|++++|+|++. +++. +
T Consensus 17 ~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~-----~ 91 (365)
T PRK09188 17 SARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT-----G 91 (365)
T ss_pred cCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc-----C
Confidence 4669999999999999999999876 678889998653211 112468999999999999985 4432 3
Q ss_pred cEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCC-CCCceeecCCCC
Q 040812 127 EVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDI-KPANVLINEKME 191 (300)
Q Consensus 127 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dl-kp~Nill~~~~~ 191 (300)
..|+||||++|++|.. +.. .. ...++.|++.||.|||++||+|||| ||+|||++.++.
T Consensus 92 ~~~LVmE~~~G~~L~~-~~~---~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ 150 (365)
T PRK09188 92 KDGLVRGWTEGVPLHL-ARP---HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGE 150 (365)
T ss_pred CcEEEEEccCCCCHHH-hCc---cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCC
Confidence 5799999999999973 211 11 1467899999999999999999999 999999987654
No 417
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.88 E-value=1.3e-23 Score=186.75 Aligned_cols=220 Identities=27% Similarity=0.374 Sum_probs=179.1
Q ss_pred eecCCcceEEEEEEE---ccCCeEEEEEEeecCCCC----CCCHHHHHHHHhcC-CCceeEeceeeeCCCCcEEEEEecc
Q 040812 64 VLGQGNGGTVFKVRH---KQTLALYALKVMQCDRGT----PPNPQELNILRQTN-SPYIVKCHQIFTKPSGEVSILMEYM 135 (300)
Q Consensus 64 ~lg~G~~g~V~~~~~---~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~lv~e~~ 135 (300)
.+|+|+||.|++++. ...+..+|+|+.+..... .....|..++...+ ||.+++++..+..+. ..++++++.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~-kl~l~ld~~ 79 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDG-KLYLILDFL 79 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeecccc-chhHhhhhc
Confidence 379999999999764 345778999988654322 13345888888887 999999999998765 899999999
Q ss_pred CCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcc---------------ceeec
Q 040812 136 DAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG---------------YSCLY 200 (300)
Q Consensus 136 ~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~---------------~~~~~ 200 (300)
.||+|...+.....+.+...+.+...++.+++++|+.+++|||+|++||+++.+|..... ++..|
T Consensus 80 rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~ey 159 (612)
T KOG0603|consen 80 RGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTYEY 159 (612)
T ss_pred ccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhhcccchhh
Confidence 999999999888889999999999999999999999999999999999999998754322 24456
Q ss_pred cccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHhccC
Q 040812 201 ESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKG 280 (300)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~ 280 (300)
++||... ....++|.||||++++||+||..||.. +.+.. ........|...+..+++++..++..
T Consensus 160 mApEI~~-----gh~~a~D~ws~gvl~felltg~~pf~~--------~~~~~-Il~~~~~~p~~l~~~a~~~~~~l~~r- 224 (612)
T KOG0603|consen 160 RAPEIIN-----GHLSAADWWSFGVLAFELLTGTLPFGG--------DTMKR-ILKAELEMPRELSAEARSLFRQLFKR- 224 (612)
T ss_pred hhhHhhh-----ccCCcccchhhhhhHHHHhhCCCCCch--------HHHHH-HhhhccCCchhhhHHHHHHHHHHHhh-
Confidence 6666654 234589999999999999999999965 22222 22445667888899999999999999
Q ss_pred CCCCCCC-----HHHHhcCCCCCC
Q 040812 281 DPSKRWT-----ASQLLSHPFLAD 299 (300)
Q Consensus 281 dp~~Rpt-----~~~~l~hpw~~~ 299 (300)
+|..|.- +.++++|+||..
T Consensus 225 ~p~nrLg~~~~~~~eik~h~f~~~ 248 (612)
T KOG0603|consen 225 NPENRLGAGPDGVDEIKQHEFFQS 248 (612)
T ss_pred CHHHHhccCcchhHHHhccchhee
Confidence 9999985 579999999964
No 418
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.87 E-value=5.7e-22 Score=165.73 Aligned_cols=215 Identities=23% Similarity=0.308 Sum_probs=129.6
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHH-------hcC----------CCceeEecee
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILR-------QTN----------SPYIVKCHQI 120 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~-------~l~----------h~niv~~~~~ 120 (300)
++...+.||.|+++.||.+.+.+|++.+|+|++...... ..++++.++ .+. |-.++..++.
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~--~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~ 90 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADA--SANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDL 90 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTT--HTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEeccccc--chHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEE
Confidence 467789999999999999999999999999998765522 111222221 111 1112222222
Q ss_pred ee---------CCC--C-----cEEEEEeccCCCCHHHHHHh---CCC----CCHHHHHHHHHHHHHHHHHhHhCCcccc
Q 040812 121 FT---------KPS--G-----EVSILMEYMDAGSLEIYVKS---RGR----LSEDIICTISRQVLKGLFYMHSRNIVHR 177 (300)
Q Consensus 121 ~~---------~~~--~-----~~~lv~e~~~~~~L~~~l~~---~~~----l~~~~~~~i~~qi~~~l~~lH~~~i~H~ 177 (300)
.. ... . +.+++|+-+.+ +|.+++.. ... +.......+..|++..+++||..|++|+
T Consensus 91 ~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~-dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHg 169 (288)
T PF14531_consen 91 LRIPGKPPFFERGPGQSIYWVLNRFLLMPRAQG-DLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHG 169 (288)
T ss_dssp EEETTS-SEEEECETTEEEEEESEEEEEE--SE-EHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEES
T ss_pred EEEcCCCcceecCCCCccceeehhhhccchhhh-cHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEec
Confidence 11 000 0 24678888865 88887652 211 2223334666899999999999999999
Q ss_pred CCCCCceeecCCCCCCcccee----------------ecccccccccc-----CCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040812 178 DIKPANVLINEKMEHPCGYSC----------------LYESGEARHRK-----HGGYNGFAADIWSFGVTMMELYMGYYP 236 (300)
Q Consensus 178 Dlkp~Nill~~~~~~~~~~~~----------------~~~~~~~~~~~-----~~~~~~~~~DiwSlG~il~elltg~~p 236 (300)
||||+|++++.++....|++. .+.+||..... ..-.++.+.|.|+||+++|.|++|..|
T Consensus 170 di~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lP 249 (288)
T PF14531_consen 170 DIKPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLP 249 (288)
T ss_dssp T-SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-S
T ss_pred ccceeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCC
Confidence 999999999998876554421 13333332221 112356789999999999999999999
Q ss_pred CCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHhccCCCCCC
Q 040812 237 FLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKR 285 (300)
Q Consensus 237 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~dp~~R 285 (300)
|........... . ...-. ..++.+++||..+|+. ||++|
T Consensus 250 f~~~~~~~~~~~-----~---f~~C~-~~Pe~v~~LI~~lL~~-~~~~R 288 (288)
T PF14531_consen 250 FGLSSPEADPEW-----D---FSRCR-DMPEPVQFLIRGLLQR-NPEDR 288 (288)
T ss_dssp TCCCGGGSTSGG-----G---GTTSS----HHHHHHHHHHT-S-SGGGS
T ss_pred CCCCCccccccc-----c---chhcC-CcCHHHHHHHHHHccC-CcccC
Confidence 975432211100 0 01112 5788999999999999 99988
No 419
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.87 E-value=1.6e-21 Score=156.78 Aligned_cols=122 Identities=16% Similarity=0.179 Sum_probs=96.8
Q ss_pred eeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC----------------------------CCHHHHHHHHhcCCCc
Q 040812 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP----------------------------PNPQELNILRQTNSPY 113 (300)
Q Consensus 62 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----------------------------~~~~E~~~l~~l~h~n 113 (300)
.+.||+|+||.||+|.+. +|+.||||+++...... ...+|...+.++.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 467999999999999987 89999999987643210 0135788899999988
Q ss_pred eeEeceeeeCCCCcEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCceeec
Q 040812 114 IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHS-RNIVHRDIKPANVLIN 187 (300)
Q Consensus 114 iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~-~~i~H~Dlkp~Nill~ 187 (300)
+.....+... ..|+||||++|+++.........++...+..++.|++.+|.++|+ .||+||||||+||+++
T Consensus 81 i~~p~~~~~~---~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~ 152 (190)
T cd05145 81 VPVPEPILLK---KNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH 152 (190)
T ss_pred CCCceEEEec---CCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE
Confidence 7544433322 248999999987654443334568889999999999999999999 9999999999999998
No 420
>PRK10345 hypothetical protein; Provisional
Probab=99.85 E-value=7.2e-21 Score=154.01 Aligned_cols=123 Identities=21% Similarity=0.309 Sum_probs=98.0
Q ss_pred eeeeecCCcceEEEEEEEccCCeEEEEEEeecCCC--CCCCHHHHHHHHhc-----CCCceeEeceeeeCCCC--cEE-E
Q 040812 61 KLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG--TPPNPQELNILRQT-----NSPYIVKCHQIFTKPSG--EVS-I 130 (300)
Q Consensus 61 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~--~~~-l 130 (300)
-.+.||+|+||.||. ++.++.. +||++..... .....+|+.+++++ .||||++++++++++.| .++ +
T Consensus 6 ~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~ 82 (210)
T PRK10345 6 EQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV 82 (210)
T ss_pred CcceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence 346799999999995 6666655 6898865322 22357899999999 57999999999988643 434 7
Q ss_pred EEec--cCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHH-HHhHhCCccccCCCCCceeecCC
Q 040812 131 LMEY--MDAGSLEIYVKSRGRLSEDIICTISRQVLKGL-FYMHSRNIVHRDIKPANVLINEK 189 (300)
Q Consensus 131 v~e~--~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l-~~lH~~~i~H~Dlkp~Nill~~~ 189 (300)
|||| +.+++|.+++.+. .+++. ..++.|++.++ +|||+++|+||||||+|||++..
T Consensus 83 I~e~~G~~~~tL~~~l~~~-~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~ 141 (210)
T PRK10345 83 IADFDGKPSITLTEFAEQC-RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRI 141 (210)
T ss_pred EecCCCCcchhHHHHHHcc-cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEecc
Confidence 8999 5579999999764 56666 35678888887 99999999999999999999864
No 421
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.85 E-value=3.4e-21 Score=179.66 Aligned_cols=202 Identities=29% Similarity=0.439 Sum_probs=146.5
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEecc
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYM 135 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~ 135 (300)
-++|..++.|..|+||.||+++++.+.+.+|+|+-+.+. +++. |.. +. +..+.|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~kiNkq~l----------ilRn-----ilt----~a---~npfvv---- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQNL----------ILRN-----ILT----FA---GNPFVV---- 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcccccch----------hhhc-----ccc----cc---CCccee----
Confidence 356889999999999999999999999999996643221 1111 111 11 123344
Q ss_pred CCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCc---------------------
Q 040812 136 DAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPC--------------------- 194 (300)
Q Consensus 136 ~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~--------------------- 194 (300)
|+-...++.-+.++... +.+++|||+.||+|||+||+|.+|+.-+..+.
T Consensus 136 --gDc~tllk~~g~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~ 205 (1205)
T KOG0606|consen 136 --GDCATLLKNIGPLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGH 205 (1205)
T ss_pred --chhhhhcccCCCCcchh--------hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcc
Confidence 56666676655665444 77899999999999999999999986554422
Q ss_pred -------------cceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCC
Q 040812 195 -------------GYSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSL 261 (300)
Q Consensus 195 -------------~~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 261 (300)
.++..|.+|+.... ..|++.+|+|++|+|+||.+-|+.||++...+.-+-.++.... .++..
T Consensus 206 I~k~t~Ef~dKqvcgTPeyiaPeVilr---qgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i-~wpE~- 280 (1205)
T KOG0606|consen 206 IEKDTHEFQDKQVCGTPEYIAPEVILR---QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDI-EWPEE- 280 (1205)
T ss_pred hHHHHHHhhhccccCCccccChhhhhh---hccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhc-ccccc-
Confidence 23445566665543 3478899999999999999999999988766544444443322 22222
Q ss_pred CCCCChHHHHHHHHHhccCCCCCCC---CHHHHhcCCCCCC
Q 040812 262 PECSSEKFRDFIRCCLQKGDPSKRW---TASQLLSHPFLAD 299 (300)
Q Consensus 262 ~~~~~~~l~~li~~~l~~~dp~~Rp---t~~~~l~hpw~~~ 299 (300)
.+.+.++++++|.++|+. +|..|. .+-++.+|+||..
T Consensus 281 dea~p~Ea~dli~~LL~q-np~~Rlgt~ga~evk~h~ff~~ 320 (1205)
T KOG0606|consen 281 DEALPPEAQDLIEQLLRQ-NPLCRLGTGGALEVKQHGFFQL 320 (1205)
T ss_pred CcCCCHHHHHHHHHHHHh-ChHhhcccchhhhhhhccceee
Confidence 556788999999999999 999997 4678899999974
No 422
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.82 E-value=3.4e-19 Score=142.01 Aligned_cols=168 Identities=15% Similarity=0.063 Sum_probs=117.6
Q ss_pred eeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC------CCHHHHHHHHhcCC-CceeEeceeeeCCCCcEEEEE
Q 040812 60 EKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP------PNPQELNILRQTNS-PYIVKCHQIFTKPSGEVSILM 132 (300)
Q Consensus 60 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~------~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~~lv~ 132 (300)
.+...|++|+||+|+++.. .+..++.+.+....... .+.+|+++|++++| +++++++++ . ..|++|
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~-~~~lvm 77 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----D-GRHLDR 77 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----c-CEEEEE
Confidence 3457899999999997776 46778877765433321 24679999999965 789999886 2 469999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCC-CCCceeecCCCCCCccceeecc--ccccc---
Q 040812 133 EYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDI-KPANVLINEKMEHPCGYSCLYE--SGEAR--- 206 (300)
Q Consensus 133 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dl-kp~Nill~~~~~~~~~~~~~~~--~~~~~--- 206 (300)
||+.|.+|.+.... . ...++.|++.+|.++|++||+|||| ||+|||++.++...+-+++... .+...
T Consensus 78 eyI~G~~L~~~~~~------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r 150 (218)
T PRK12274 78 SYLAGAAMYQRPPR------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMR 150 (218)
T ss_pred eeecCccHHhhhhh------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHH
Confidence 99999998754321 1 2357889999999999999999999 7999999876543322221111 00110
Q ss_pred --cc------------cCCCCC-----------C-chhhHHHHHHHHHHHHhCCCCCCCCC
Q 040812 207 --HR------------KHGGYN-----------G-FAADIWSFGVTMMELYMGYYPFLEPG 241 (300)
Q Consensus 207 --~~------------~~~~~~-----------~-~~~DiwSlG~il~elltg~~pf~~~~ 241 (300)
.. ....+. + ...++++.|+-+|.++||..++...+
T Consensus 151 ~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 151 LLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 00 001111 1 35799999999999999999986544
No 423
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.81 E-value=9.8e-20 Score=172.41 Aligned_cols=179 Identities=21% Similarity=0.286 Sum_probs=135.3
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHhcC---CCceeEeceeeeCCCCcEEEE
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTN---SPYIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~~lv 131 (300)
+...|.+-+.||+|+||.||+|...+ |+.||+|+-+..... .+.--.+++.+|+ -+.|..+...+.-.+ ..++|
T Consensus 696 ~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~W-EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~-~S~lv 772 (974)
T KOG1166|consen 696 GGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPW-EFYICLQVMERLKPQMLPSIMHISSAHVFQN-ASVLV 772 (974)
T ss_pred cceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCce-eeeehHHHHHhhchhhhcchHHHHHHHccCC-cceee
Confidence 44678999999999999999999988 999999997654433 2222344555565 234444444444444 56799
Q ss_pred EeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcc--ceeecccc------
Q 040812 132 MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG--YSCLYESG------ 203 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~--~~~~~~~~------ 203 (300)
+||.+.|+|.+++...+.+++..+..+..||+..+++||..+|||+||||+|+||......+-+ +..+.+++
T Consensus 773 ~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~ 852 (974)
T KOG1166|consen 773 SEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMK 852 (974)
T ss_pred eeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccceeee
Confidence 9999999999999988889999999999999999999999999999999999999754222111 11111121
Q ss_pred -----------------ccccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040812 204 -----------------EARHRKHGGYNGFAADIWSFGVTMMELYMGYYP 236 (300)
Q Consensus 204 -----------------~~~~~~~~~~~~~~~DiwSlG~il~elltg~~p 236 (300)
...+...|..+++.+|.|.|..+++-||.|+.-
T Consensus 853 lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 853 LFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred EcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 223344588899999999999999999998543
No 424
>smart00090 RIO RIO-like kinase.
Probab=99.80 E-value=2.5e-19 Score=148.38 Aligned_cols=125 Identities=14% Similarity=0.124 Sum_probs=98.9
Q ss_pred cceeeeeecCCcceEEEEEE-EccCCeEEEEEEeecCCCC-----------C---------------CCHHHHHHHHhcC
Q 040812 58 QLEKLQVLGQGNGGTVFKVR-HKQTLALYALKVMQCDRGT-----------P---------------PNPQELNILRQTN 110 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~-~~~~~~~vaiK~~~~~~~~-----------~---------------~~~~E~~~l~~l~ 110 (300)
-|++.+.||+|+||.||+|. +..+|+.||+|+++..... . ...+|+..+.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47888999999999999999 6678999999998754210 0 0236899999987
Q ss_pred CCc--eeEeceeeeCCCCcEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCC-ccccCCCCCceeec
Q 040812 111 SPY--IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRN-IVHRDIKPANVLIN 187 (300)
Q Consensus 111 h~n--iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~-i~H~Dlkp~Nill~ 187 (300)
+.+ +..+++. . ..++||||++|++|.........+....+..++.||+.+|.+||++| ++||||||+||+++
T Consensus 109 ~~~i~~p~~~~~----~-~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~ 183 (237)
T smart00090 109 EAGVPVPKPIAW----R-RNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH 183 (237)
T ss_pred hcCCCCCeeeEe----c-CceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE
Confidence 533 3344432 2 35899999999888776544455677778899999999999999999 99999999999998
No 425
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.77 E-value=5.3e-18 Score=138.69 Aligned_cols=118 Identities=19% Similarity=0.271 Sum_probs=96.6
Q ss_pred eeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC----------CCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEE
Q 040812 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP----------PNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILM 132 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----------~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~ 132 (300)
+.||+|++|.||+|.+ .+..+++|......... ...+|+.++..+.|+++.....++.... ..++||
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~-~~~lv~ 78 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPE-NFIIVM 78 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCC-CCEEEE
Confidence 5799999999999988 46788999865433211 2346899999999998876666555443 678999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeec
Q 040812 133 EYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLIN 187 (300)
Q Consensus 133 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~ 187 (300)
||++|++|.+++.... . ....++.+++.+|.++|+.|++|+|++|+|||++
T Consensus 79 e~~~G~~L~~~~~~~~---~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~ 129 (211)
T PRK14879 79 EYIEGEPLKDLINSNG---M-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS 129 (211)
T ss_pred EEeCCcCHHHHHHhcc---H-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE
Confidence 9999999999987532 2 7889999999999999999999999999999998
No 426
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.77 E-value=2.1e-18 Score=153.31 Aligned_cols=185 Identities=23% Similarity=0.274 Sum_probs=140.9
Q ss_pred HHhcCCCceeEeceeeeCCCCcEEEEEeccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHhHhCCc-cccCCCCCc
Q 040812 106 LRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKS-RGRLSEDIICTISRQVLKGLFYMHSRNI-VHRDIKPAN 183 (300)
Q Consensus 106 l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i-~H~Dlkp~N 183 (300)
|+.+.|.|+.+++|.+.+. +..++|.+||..|+|.+.+.. ...++......+++.|+.||.|||...| .|+.++..|
T Consensus 1 l~~l~h~n~~~f~g~~~~~-~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~n 79 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG-PEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSN 79 (484)
T ss_pred CcccchhhhhhheeeEecC-CceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccc
Confidence 4678999999999999886 489999999999999999987 4468889999999999999999998765 999999999
Q ss_pred eeecCCCCCCccc---------------------eeeccccccccccCC----CCCCchhhHHHHHHHHHHHHhCCCCCC
Q 040812 184 VLINEKMEHPCGY---------------------SCLYESGEARHRKHG----GYNGFAADIWSFGVTMMELYMGYYPFL 238 (300)
Q Consensus 184 ill~~~~~~~~~~---------------------~~~~~~~~~~~~~~~----~~~~~~~DiwSlG~il~elltg~~pf~ 238 (300)
++++.....+..+ ..+|.+||....... ...+.+.||||||++++|+++...||.
T Consensus 80 Clvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~ 159 (484)
T KOG1023|consen 80 CLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFD 159 (484)
T ss_pred ceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccc
Confidence 9999764433222 223455554432211 124678999999999999999999998
Q ss_pred CCCCCchHHHHHHHHhh-CCCCCCCC-----CCChHHHHHHHHHhccCCCCCCCCHHHHh
Q 040812 239 EPGQEPDFLSLMLAICF-REPPSLPE-----CSSEKFRDFIRCCLQKGDPSKRWTASQLL 292 (300)
Q Consensus 239 ~~~~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~l~~li~~~l~~~dp~~Rpt~~~~l 292 (300)
.........+++..+.. ...+..|. ...+++..++..||.. +|++||+++++-
T Consensus 160 ~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e-~P~~rPs~~~i~ 218 (484)
T KOG1023|consen 160 LRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEE-IPEKRPSIEQIR 218 (484)
T ss_pred cccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhccc-ChhhCccHHHHH
Confidence 75544443445444333 22222222 3455799999999999 999999998874
No 427
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.73 E-value=3.9e-19 Score=164.56 Aligned_cols=240 Identities=23% Similarity=0.287 Sum_probs=178.5
Q ss_pred CCcceeeeeecCCcceEEEEEEEcc-CCeEEEEEEeecCCCCCC----CHHHHHHHHhcC-CCceeEeceeeeCCCCcEE
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQ-TLALYALKVMQCDRGTPP----NPQELNILRQTN-SPYIVKCHQIFTKPSGEVS 129 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~----~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~ 129 (300)
...|.+.+.||+|+|+.|-+..... +...+|.|.+........ ...|..+-+.+. |.|++.+++...... ..+
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~-~~~ 97 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPR-SYL 97 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCc-ccc
Confidence 3457888889999999999988743 445677776654331111 133777777776 999999999987765 789
Q ss_pred EEEeccCCCCHHHHH-HhCC-CCCHHHHHHHHHHHHHHHHHhH-hCCccccCCCCCceeecCCC-CC---Ccc-------
Q 040812 130 ILMEYMDAGSLEIYV-KSRG-RLSEDIICTISRQVLKGLFYMH-SRNIVHRDIKPANVLINEKM-EH---PCG------- 195 (300)
Q Consensus 130 lv~e~~~~~~L~~~l-~~~~-~l~~~~~~~i~~qi~~~l~~lH-~~~i~H~Dlkp~Nill~~~~-~~---~~~------- 195 (300)
++++|..|+++...+ .... ..+...+..++.|+..++.|+| ..++.|+||||+|.+++..+ .. +++
T Consensus 98 ~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~ 177 (601)
T KOG0590|consen 98 LSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRN 177 (601)
T ss_pred cccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccccc
Confidence 999999999999988 5544 5778889999999999999999 99999999999999999876 32 111
Q ss_pred -------------ceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCC
Q 040812 196 -------------YSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLP 262 (300)
Q Consensus 196 -------------~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (300)
.+.-|.+||..... .+.++..|+||.|+++.-+++|..|+........................+
T Consensus 178 ~~g~~~~~~~~~g~s~~y~a~E~~~~~--~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (601)
T KOG0590|consen 178 KNGAERSLKDRCGSSPPYGAPEHLSGK--AYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPW 255 (601)
T ss_pred cCCcceeeecccCCCCCCCCcccccch--hhcCCCcccccccccccccccCCCCccccccccccceeecccccccccCcc
Confidence 12233333333321 345678999999999999999999997654443322222111112124455
Q ss_pred CCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 263 ECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 263 ~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
...+....+++.+++.. +|+.|.+.+++..++|+..
T Consensus 256 ~~~~~~~~~~l~k~l~~-~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 256 NSISDQAHDLLHKILKE-NPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred ccCChhhhhcccccccC-Cchhccccccccccccccc
Confidence 67788899999999998 9999999999999999864
No 428
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.72 E-value=2.1e-17 Score=133.84 Aligned_cols=123 Identities=17% Similarity=0.179 Sum_probs=94.3
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC------------------------CCCHHHHHHHHhcCCCc
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT------------------------PPNPQELNILRQTNSPY 113 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~------------------------~~~~~E~~~l~~l~h~n 113 (300)
.|.+.+.||+|+||.||++... +|+.||||++...... ....+|+.++..+.|.+
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 94 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG 94 (198)
T ss_pred hhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC
Confidence 3777899999999999999885 6899999987643210 01245788888887774
Q ss_pred --eeEeceeeeCCCCcEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCC
Q 040812 114 --IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKME 191 (300)
Q Consensus 114 --iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~ 191 (300)
+...++ . +..++||||++|++|...... .....++.+++.++.++|+.|++|+||||+||+++.++.
T Consensus 95 i~v~~~~~---~--~~~~lv~e~~~g~~L~~~~~~------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~ 163 (198)
T cd05144 95 FPVPKPID---W--NRHAVVMEYIDGVELYRVRVL------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEK 163 (198)
T ss_pred CCCCceee---c--CCceEEEEEeCCcchhhcccc------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCc
Confidence 333333 1 246899999999998765431 345678899999999999999999999999999987644
Q ss_pred C
Q 040812 192 H 192 (300)
Q Consensus 192 ~ 192 (300)
.
T Consensus 164 ~ 164 (198)
T cd05144 164 I 164 (198)
T ss_pred E
Confidence 3
No 429
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.72 E-value=3.4e-17 Score=151.69 Aligned_cols=121 Identities=17% Similarity=0.164 Sum_probs=94.4
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCC-CC---------CCCHHHHHHHHhcCCCceeEeceeeeCCC
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDR-GT---------PPNPQELNILRQTNSPYIVKCHQIFTKPS 125 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~---------~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 125 (300)
...|...+.||+|+||.||++.+.... +++|...... .. ..+.+|+.+++.++|++++....+.....
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~--~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~ 409 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGRD--AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE 409 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCcc--ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC
Confidence 344567899999999999999886543 3444322111 10 12357999999999999887766555443
Q ss_pred CcEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeec
Q 040812 126 GEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLIN 187 (300)
Q Consensus 126 ~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~ 187 (300)
..++||||++|++|.+++. ....++.|++.+|.+||+.|++||||||+|||++
T Consensus 410 -~~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~ 462 (535)
T PRK09605 410 -EKTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVR 462 (535)
T ss_pred -CCEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEEE
Confidence 6789999999999999885 3467899999999999999999999999999994
No 430
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.71 E-value=4.7e-17 Score=131.87 Aligned_cols=114 Identities=15% Similarity=0.220 Sum_probs=88.7
Q ss_pred eecCCcceEEEEEEEccCCeEEEEEEeecCCCC----------CCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEe
Q 040812 64 VLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT----------PPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 64 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----------~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e 133 (300)
.||+|+||.||++.+ ++..+++|........ ....+|+.++..+.|+++.....++..+. ..++|||
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~-~~~lv~e 77 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPD-NKTIVME 77 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC-CCEEEEE
Confidence 389999999999985 4678999986543211 11246999999998876544333333333 5789999
Q ss_pred ccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeec
Q 040812 134 YMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLIN 187 (300)
Q Consensus 134 ~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~ 187 (300)
|++|++|.+++..... .++.|++.+|.+||+.|++|+|++|+||+++
T Consensus 78 ~~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~ 124 (199)
T TIGR03724 78 YIEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR 124 (199)
T ss_pred EECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE
Confidence 9999999988765321 7899999999999999999999999999998
No 431
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.64 E-value=4.4e-16 Score=124.87 Aligned_cols=118 Identities=18% Similarity=0.245 Sum_probs=82.3
Q ss_pred eeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCC--------------------------HHHHHHHHhcCCCc--
Q 040812 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPN--------------------------PQELNILRQTNSPY-- 113 (300)
Q Consensus 62 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~--------------------------~~E~~~l~~l~h~n-- 113 (300)
.+.||+|+||.||+|.+. +++.||||++......... ..|...+.++.+.+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 467999999999999987 7889999998754321100 13444454443332
Q ss_pred eeEeceeeeCCCCcEEEEEeccCCCCHHH-HHHhCCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCceeec
Q 040812 114 IVKCHQIFTKPSGEVSILMEYMDAGSLEI-YVKSRGRLSEDIICTISRQVLKGLFYMHS-RNIVHRDIKPANVLIN 187 (300)
Q Consensus 114 iv~~~~~~~~~~~~~~lv~e~~~~~~L~~-~l~~~~~l~~~~~~~i~~qi~~~l~~lH~-~~i~H~Dlkp~Nill~ 187 (300)
+.+.++. ...++||||++++.+.. .+... ... ..+..++.+++.++.++|. .||+|+||||+||+++
T Consensus 81 ~~~~~~~-----~~~~lv~e~~~g~~~~~~~l~~~-~~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~ 149 (187)
T cd05119 81 VPKPIDL-----NRHVLVMEFIGGDGIPAPRLKDV-RLL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD 149 (187)
T ss_pred CCceEec-----CCCEEEEEEeCCCCccChhhhhh-hhc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE
Confidence 3333332 14589999999854321 11111 111 6678999999999999999 9999999999999998
No 432
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.64 E-value=2.1e-15 Score=125.25 Aligned_cols=121 Identities=18% Similarity=0.219 Sum_probs=91.2
Q ss_pred eeec-CCcceEEEEEEEccCCeEEEEEEeecCCC---------------CCCCHHHHHHHHhcCCCce--eEeceeeeCC
Q 040812 63 QVLG-QGNGGTVFKVRHKQTLALYALKVMQCDRG---------------TPPNPQELNILRQTNSPYI--VKCHQIFTKP 124 (300)
Q Consensus 63 ~~lg-~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---------------~~~~~~E~~~l~~l~h~ni--v~~~~~~~~~ 124 (300)
..|| .||.|+||.+... +..+++|.+..... .....+|+.++.+++|+++ +..+++....
T Consensus 37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 4577 8999999998875 66889998753210 1123569999999998875 6666654333
Q ss_pred CCc---EEEEEeccCC-CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCC
Q 040812 125 SGE---VSILMEYMDA-GSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKM 190 (300)
Q Consensus 125 ~~~---~~lv~e~~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~ 190 (300)
.+. .++|||+++| .+|.+++... .+++. .+.||+.+|.+||++||+||||||+|||++.++
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~-~l~~~----~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~ 179 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA-PLSEE----QWQAIGQLIARFHDAGVYHADLNAHNILLDPDG 179 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC-CCCHH----HHHHHHHHHHHHHHCCCCCCCCCchhEEEcCCC
Confidence 322 3599999997 6999888653 45544 367899999999999999999999999998764
No 433
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.62 E-value=4.2e-15 Score=114.43 Aligned_cols=119 Identities=23% Similarity=0.317 Sum_probs=97.8
Q ss_pred eeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHhcCC--CceeEeceeeeCCCCcEEEEEeccCCC
Q 040812 61 KLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNS--PYIVKCHQIFTKPSGEVSILMEYMDAG 138 (300)
Q Consensus 61 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~lv~e~~~~~ 138 (300)
+++.||+|.++.||++...+ ..+++|..........+.+|+..++.++| .++++++.+.... +..+++|||++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~-~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREKGADREREVAILQLLARKGLPVPKVLASGESD-GWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEEcCCC-CccEEEEEecCCe
Confidence 45789999999999999865 67899998654433356789999999977 4888888877654 4799999999988
Q ss_pred CHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhC---CccccCCCCCceeecCC
Q 040812 139 SLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSR---NIVHRDIKPANVLINEK 189 (300)
Q Consensus 139 ~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~i~H~Dlkp~Nill~~~ 189 (300)
.+..+ +......++.+++.+|..+|.. +++|+|++|+||+++..
T Consensus 79 ~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~ 125 (155)
T cd05120 79 TLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDG 125 (155)
T ss_pred ecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECC
Confidence 77654 5566778899999999999985 79999999999999874
No 434
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.61 E-value=5.3e-16 Score=136.05 Aligned_cols=157 Identities=23% Similarity=0.342 Sum_probs=115.8
Q ss_pred cEEEEEeccCCCCHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccc-------
Q 040812 127 EVSILMEYMDAGSLEIYVKSRG---RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGY------- 196 (300)
Q Consensus 127 ~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~------- 196 (300)
++||.|++|.-.+|.+++..+. ..+......+++|+..|+.| +|.+|+|+||.||++..+...++|.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~ 406 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQ 406 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeec
Confidence 5899999999999999997543 36778889999999999999 9999999999999998765443332
Q ss_pred ------------------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhhCC
Q 040812 197 ------------------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYM-GYYPFLEPGQEPDFLSLMLAICFRE 257 (300)
Q Consensus 197 ------------------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~ 257 (300)
+..|+.||... |..|+.++||||||+|++|+++ -...|.- ......+..+.
T Consensus 407 ~~~~~~~~~~a~~t~~~gt~~YmsPEQi~---g~~y~~kvdIyaLGlil~EL~~~f~T~~er-------~~t~~d~r~g~ 476 (516)
T KOG1033|consen 407 DKDETVAPAAASHTQQVGTLLYMSPEQIR---GQQYSEKVDIYALGLILAELLIQFSTQFER-------IATLTDIRDGI 476 (516)
T ss_pred ccCCcccchhhhhhhcccccccCCHHHHh---hhhhhhhcchhhHHHHHHHHHHHhccHHHH-------HHhhhhhhcCC
Confidence 44455555544 6778999999999999999997 3333311 11122222222
Q ss_pred CC-CCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCC
Q 040812 258 PP-SLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLA 298 (300)
Q Consensus 258 ~~-~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~ 298 (300)
.+ .+..+. +.-.+|+.+++.. .|.+||++.+.--|+|+.
T Consensus 477 ip~~~~~d~-p~e~~ll~~lls~-~p~~RP~~~~~~~~~~~~ 516 (516)
T KOG1033|consen 477 IPPEFLQDY-PEEYTLLQQLLSP-SPEERPSAIEVALHEFLQ 516 (516)
T ss_pred CChHHhhcC-cHHHHHHHHhcCC-CcccCchHHHHhhhhhcC
Confidence 22 233333 3446899999999 999999988888888863
No 435
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.54 E-value=3.5e-14 Score=126.71 Aligned_cols=230 Identities=24% Similarity=0.318 Sum_probs=168.6
Q ss_pred cceeeeeecC--CcceEEEEEEE--ccCCeEEEEEEeecCC----CCCCCHHHHHHHHhc-CCCceeEeceeeeCCCCcE
Q 040812 58 QLEKLQVLGQ--GNGGTVFKVRH--KQTLALYALKVMQCDR----GTPPNPQELNILRQT-NSPYIVKCHQIFTKPSGEV 128 (300)
Q Consensus 58 ~y~~~~~lg~--G~~g~V~~~~~--~~~~~~vaiK~~~~~~----~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 128 (300)
.+.+.+.+|+ |++|.||.+.. ..++..+|+|.-+... ....-.+|+...+++ .|+|.++.+..++.. +..
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~-~~l 193 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGS-GIL 193 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccC-Ccc
Confidence 3667888999 99999999998 8889999999743221 222235677777766 589999988887764 489
Q ss_pred EEEEeccCCCCHHHHHHhCCC-CCHHHHHHHHHHHHH----HHHHhHhCCccccCCCCCceeecCC-CCCCccc------
Q 040812 129 SILMEYMDAGSLEIYVKSRGR-LSEDIICTISRQVLK----GLFYMHSRNIVHRDIKPANVLINEK-MEHPCGY------ 196 (300)
Q Consensus 129 ~lv~e~~~~~~L~~~l~~~~~-l~~~~~~~i~~qi~~----~l~~lH~~~i~H~Dlkp~Nill~~~-~~~~~~~------ 196 (300)
|+-+|+|. .+|..+...... ++...++..+.+..+ ||.++|..+++|-|+||+||++..+ .....+.
T Consensus 194 fiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~ 272 (524)
T KOG0601|consen 194 FIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSK 272 (524)
T ss_pred eeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcceeEE
Confidence 99999996 589888887555 889999999999999 9999999999999999999999887 3322221
Q ss_pred ------------------eeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCC
Q 040812 197 ------------------SCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREP 258 (300)
Q Consensus 197 ------------------~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 258 (300)
.+.|..++.. .+.++.+.|++|+|.++.+..+|..+...... ..+...-. ...+
T Consensus 273 i~~~~~~~~~~~~~r~~~~~~Y~~ke~~----~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~-~~W~~~r~---~~ip 344 (524)
T KOG0601|consen 273 ISDGNFSSVFKVSKRPEGDCIYAAKELL----NGLATFASDIFSLGEVILEAILGSHLPSVGKN-SSWSQLRQ---GYIP 344 (524)
T ss_pred ccCCccccceeeeecCCCCceEeChhhh----ccccchHhhhcchhhhhHhhHhhcccccCCCC-CCcccccc---ccCc
Confidence 1223333332 23457799999999999999998766643211 11111110 0122
Q ss_pred CCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCC
Q 040812 259 PSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLA 298 (300)
Q Consensus 259 ~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~ 298 (300)
.++-+..+..+...+..+++. +|-.|++++.+++|+++.
T Consensus 345 ~e~~~~~s~~l~~~~~~~~d~-~~~~~~~~q~~~~l~~i~ 383 (524)
T KOG0601|consen 345 LEFCEGGSSSLRSVTSQMLDE-DPRLRLTAQILTALNVIH 383 (524)
T ss_pred hhhhcCcchhhhhHHHHhcCc-chhhhhHHHHHhcccccc
Confidence 223334466677799999999 999999999999999874
No 436
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.53 E-value=1.7e-14 Score=119.75 Aligned_cols=187 Identities=23% Similarity=0.292 Sum_probs=130.3
Q ss_pred HHHhcCCCceeEeceeeeCCC----CcEEEEEeccCCCCHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHhHhCC--c
Q 040812 105 ILRQTNSPYIVKCHQIFTKPS----GEVSILMEYMDAGSLEIYVKSR----GRLSEDIICTISRQVLKGLFYMHSRN--I 174 (300)
Q Consensus 105 ~l~~l~h~niv~~~~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~i~~qi~~~l~~lH~~~--i 174 (300)
.+-++-|.|||+++.++.+.. ....++.||++.|++.+++++. ..+.....++|+.||++||.|||+.. |
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppi 199 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPI 199 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCcc
Confidence 344567999999999986532 2478999999999999999853 24788889999999999999999875 9
Q ss_pred cccCCCCCceeecCCCCCCccceeec-ccccc-------------------ccccCCCCCCchhhHHHHHHHHHHHHhCC
Q 040812 175 VHRDIKPANVLINEKMEHPCGYSCLY-ESGEA-------------------RHRKHGGYNGFAADIWSFGVTMMELYMGY 234 (300)
Q Consensus 175 ~H~Dlkp~Nill~~~~~~~~~~~~~~-~~~~~-------------------~~~~~~~~~~~~~DiwSlG~il~elltg~ 234 (300)
+|+++..+-|++..++..++|....- ..+.+ +........+.++|||+||....+|..++
T Consensus 200 ihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailE 279 (458)
T KOG1266|consen 200 IHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILE 279 (458)
T ss_pred ccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHhe
Confidence 99999999999998876655532110 00100 00001112234899999999999998887
Q ss_pred CCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 235 YPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 235 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
.--.+........+.+....... ....-++++..|++. .|..||++.+++.||-+=+
T Consensus 280 iq~tnseS~~~~ee~ia~~i~~l-------en~lqr~~i~kcl~~-eP~~rp~ar~llfHpllfe 336 (458)
T KOG1266|consen 280 IQSTNSESKVEVEENIANVIIGL-------ENGLQRGSITKCLEG-EPNGRPDARLLLFHPLLFE 336 (458)
T ss_pred eccCCCcceeehhhhhhhheeec-------cCccccCcCcccccC-CCCCCcchhhhhcCceeee
Confidence 65433322222222222211111 122346789999999 9999999999999997643
No 437
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.51 E-value=1.2e-14 Score=136.63 Aligned_cols=238 Identities=25% Similarity=0.300 Sum_probs=172.0
Q ss_pred CCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC-----CCHHHHHHHHhcCCCceeEeceeeeCCCCcEEE
Q 040812 56 LSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP-----PNPQELNILRQTNSPYIVKCHQIFTKPSGEVSI 130 (300)
Q Consensus 56 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~l 130 (300)
.+.+.+++.+-+|.++.++.+.-..++...+.|+........ ....+-.++....+|-+++....+.. ....++
T Consensus 803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~-rsP~~L 881 (1205)
T KOG0606|consen 803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPC-RSPLPL 881 (1205)
T ss_pred CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCC-CCCcch
Confidence 345678889999999999999999888888888765322111 11223333333445767766554333 347899
Q ss_pred EEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcccee------------
Q 040812 131 LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSC------------ 198 (300)
Q Consensus 131 v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~------------ 198 (300)
|++|+.+++|...++..+..+..-++..+..+..++++||...+.|+|++|.|++....+..+...+.
T Consensus 882 ~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~ 961 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTT 961 (1205)
T ss_pred hhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccccCcC
Confidence 99999999999999988778888889999999999999999999999999999998765443222111
Q ss_pred --------------------------------------eccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 040812 199 --------------------------------------LYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEP 240 (300)
Q Consensus 199 --------------------------------------~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 240 (300)
-|.+|+.. .|...+..+|+|++|++++|.++|.+||...
T Consensus 962 ~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~---lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~ 1038 (1205)
T KOG0606|consen 962 DLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEIL---LGRRHGSAADWWSSGVCLFEVLTGIPPFNAE 1038 (1205)
T ss_pred CcccccccCccccccccccccccccchhhccccccCCCcccCCccc---ccccCCCcchhhhhhhhhhhhhcCCCCCCCc
Confidence 01111111 1333456899999999999999999999776
Q ss_pred CCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHH---HHhcCCCCCCC
Q 040812 241 GQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTAS---QLLSHPFLADA 300 (300)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~---~~l~hpw~~~~ 300 (300)
.....+.++... ....+.-+...++...+++...+.. +|.+|..+. ++-.|+||.++
T Consensus 1039 tpq~~f~ni~~~--~~~~p~g~~~~s~~aq~~~~~ll~~-~~~qr~~a~~~~e~k~~~~~~~~ 1098 (1205)
T KOG0606|consen 1039 TPQQIFENILNR--DIPWPEGPEEGSYEAQDLINRLLTE-EPTQRLGAKGAAEVKGHPFFQDV 1098 (1205)
T ss_pred chhhhhhccccC--CCCCCCCccccChhhhhhhhhhhcc-CchhccCcccccccccCCccCCC
Confidence 655444333221 1123344567788999999999999 999999987 99999999864
No 438
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.50 E-value=3.8e-13 Score=121.52 Aligned_cols=153 Identities=20% Similarity=0.280 Sum_probs=116.3
Q ss_pred EEEEccCCeEEEEEEeecCCC--CCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEeccCCCCHHHHHHhCCCCCH
Q 040812 75 KVRHKQTLALYALKVMQCDRG--TPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSE 152 (300)
Q Consensus 75 ~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~ 152 (300)
-|..+.++.+|.|...+.... .....+-++.|+.++||||+++++.++.+. .+|+|+|.+. .|..+++.. +.
T Consensus 30 ~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~-~~ylvTErV~--Pl~~~lk~l---~~ 103 (690)
T KOG1243|consen 30 DGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEG-TLYLVTERVR--PLETVLKEL---GK 103 (690)
T ss_pred ccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccC-ceEEEeeccc--cHHHHHHHh---HH
Confidence 356666788888888876655 222356788899999999999999988765 8999999984 888888754 47
Q ss_pred HHHHHHHHHHHHHHHHhH-hCCccccCCCCCceeecCCCCCCccceeecccccccc------ccCCCCCCc--------h
Q 040812 153 DIICTISRQVLKGLFYMH-SRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEARH------RKHGGYNGF--------A 217 (300)
Q Consensus 153 ~~~~~i~~qi~~~l~~lH-~~~i~H~Dlkp~Nill~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~--------~ 217 (300)
..+...++||+.||.||| +++++|++|..+.|+++..+...+|+.-......... .....+..+ .
T Consensus 104 ~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~~s 183 (690)
T KOG1243|consen 104 EEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSEWS 183 (690)
T ss_pred HHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCccccc
Confidence 778889999999999998 6789999999999999999998887654432111110 000111111 3
Q ss_pred hhHHHHHHHHHHHHhC
Q 040812 218 ADIWSFGVTMMELYMG 233 (300)
Q Consensus 218 ~DiwSlG~il~elltg 233 (300)
.|.|-|||+++|++.|
T Consensus 184 ~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 184 IDSWGLGCLIEELFNG 199 (690)
T ss_pred hhhhhHHHHHHHHhCc
Confidence 5999999999999999
No 439
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.47 E-value=7e-13 Score=120.98 Aligned_cols=140 Identities=16% Similarity=0.148 Sum_probs=90.2
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCC----------------------C------------------
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG----------------------T------------------ 96 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----------------------~------------------ 96 (300)
..|+. +.||+|++|+||+|+.+.+|+.||||+.+.... .
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 44665 789999999999999998899999999864310 0
Q ss_pred --CCCHHHHHHHHhc----CCCceeEeceeeeCCCCcEEEEEeccCCCCHHHH--HHhCC----CCCHHHHHHHHHHHHH
Q 040812 97 --PPNPQELNILRQT----NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIY--VKSRG----RLSEDIICTISRQVLK 164 (300)
Q Consensus 97 --~~~~~E~~~l~~l----~h~niv~~~~~~~~~~~~~~lv~e~~~~~~L~~~--l~~~~----~l~~~~~~~i~~qi~~ 164 (300)
-++.+|+..+.++ .+.+.+.+-.++.+-.+..++||||++|+.+.++ +...+ .+.+..+..++.|++
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif- 277 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF- 277 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH-
Confidence 0112344444443 2444444444443323467899999999999874 23322 234444445555554
Q ss_pred HHHHhHhCCccccCCCCCceeecCCCCCCccceeecccccc
Q 040812 165 GLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYESGEA 205 (300)
Q Consensus 165 ~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~~~~~~~~ 205 (300)
..|++|+|+||+||+++.++.. .+.....+++..
T Consensus 278 ------~~GffHaDpHPGNIlv~~~g~~-~~~i~llDFGiv 311 (537)
T PRK04750 278 ------RDGFFHADMHPGNIFVSYDPPE-NPRYIALDFGIV 311 (537)
T ss_pred ------hCCeeeCCCChHHeEEecCCCC-CCeEEEEecceE
Confidence 5899999999999999887521 123444555544
No 440
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.45 E-value=8.7e-14 Score=124.23 Aligned_cols=232 Identities=22% Similarity=0.235 Sum_probs=167.3
Q ss_pred CCCCcceeeeeecCCcceEEEEEEEc-cCCeEEEEEEeecCCCCC----CCHHHHHHHHhc-CCCceeEeceeeeCCCCc
Q 040812 54 DGLSQLEKLQVLGQGNGGTVFKVRHK-QTLALYALKVMQCDRGTP----PNPQELNILRQT-NSPYIVKCHQIFTKPSGE 127 (300)
Q Consensus 54 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~----~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 127 (300)
..+.+|..+..||.|.|+.|+.+..+ .++..|++|.+.+..... ....|+.+...+ .|.+++.....|...+ .
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r-~ 340 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLR-Q 340 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccc-c
Confidence 34667899999999999999998866 678899999876543221 124566666655 5788888777666544 6
Q ss_pred EEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCC-CCCCccceeecc-----
Q 040812 128 VSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEK-MEHPCGYSCLYE----- 201 (300)
Q Consensus 128 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~-~~~~~~~~~~~~----- 201 (300)
.|+-.|||+++++.........+.+...+.+..|++.++.++|+..++|+|+||+||++..+ +....+....+.
T Consensus 341 ~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~ 420 (524)
T KOG0601|consen 341 GYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFS 420 (524)
T ss_pred ccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhcccccccccccee
Confidence 77999999999998777655578899999999999999999999999999999999999885 333333322221
Q ss_pred -------------ccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChH
Q 040812 202 -------------SGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEK 268 (300)
Q Consensus 202 -------------~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (300)
++...+ ......+.|++|||..+.+..+|.+--..... ...+..+..+..+... ..
T Consensus 421 ~~~~~~~~r~~p~~~~~~e---~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~-------~~~i~~~~~p~~~~~~-~~ 489 (524)
T KOG0601|consen 421 SGVFHHIDRLYPIAEILLE---DYPHLSKADIFSLGLSVDEAITGSPLSESGVQ-------SLTIRSGDTPNLPGLK-LQ 489 (524)
T ss_pred cccccccccccccchhhcc---ccccccccccccccccccccccCcccCccccc-------ceeeecccccCCCchH-Hh
Confidence 111111 22345689999999999999998544322111 1112223334444433 77
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHhcCCCCC
Q 040812 269 FRDFIRCCLQKGDPSKRWTASQLLSHPFLA 298 (300)
Q Consensus 269 l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~ 298 (300)
+..+.+.++.. ++..|+.+.++..|.=|.
T Consensus 490 ~q~~~kv~~~~-~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 490 LQVLLKVMINP-DRKRRPSAVELSLHSEFY 518 (524)
T ss_pred hhhhhhhhcCC-ccccchhhhhhcccchhh
Confidence 88888899988 999999999999887554
No 441
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.44 E-value=2.5e-12 Score=115.83 Aligned_cols=125 Identities=15% Similarity=0.136 Sum_probs=84.0
Q ss_pred eeecCCcceEEEEEEEccCCeEEEEEEeecCCCC------------------------------------------CCCH
Q 040812 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT------------------------------------------PPNP 100 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~------------------------------------------~~~~ 100 (300)
+.||+|++|.||+|+.+ +|+.||||+.+..... -.+.
T Consensus 123 ~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 123 KPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred cceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 67999999999999976 5899999997543100 0123
Q ss_pred HHHHHHHhc----CCCceeEeceeeeCCCCcEEEEEeccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHH-HHHHhHhCCc
Q 040812 101 QELNILRQT----NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSR-GRLSEDIICTISRQVLK-GLFYMHSRNI 174 (300)
Q Consensus 101 ~E~~~l~~l----~h~niv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~-~l~~lH~~~i 174 (300)
+|+..+.++ +|.+-+.+-.++..-.+..++||||++|++|.++.... ...+ ...++.+++. .+..+|..|+
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~~g~ 278 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLRDGF 278 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhCCc
Confidence 355555544 23333333333332233578999999999998876532 1222 3345555555 4678899999
Q ss_pred cccCCCCCceeecCCCC
Q 040812 175 VHRDIKPANVLINEKME 191 (300)
Q Consensus 175 ~H~Dlkp~Nill~~~~~ 191 (300)
+|+|++|+||+++.++.
T Consensus 279 ~H~D~hPgNilv~~~g~ 295 (437)
T TIGR01982 279 FHADLHPGNIFVLKDGK 295 (437)
T ss_pred eeCCCCcccEEECCCCc
Confidence 99999999999987743
No 442
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.34 E-value=5.4e-12 Score=99.36 Aligned_cols=114 Identities=16% Similarity=0.144 Sum_probs=84.8
Q ss_pred eeeecCCcceEEEEEEEccCCeEEEEEEeecCCC-CCCCHHHHHHHHhcCCCcee-EeceeeeCCCCcEEEEEeccCCCC
Q 040812 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG-TPPNPQELNILRQTNSPYIV-KCHQIFTKPSGEVSILMEYMDAGS 139 (300)
Q Consensus 62 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l~h~niv-~~~~~~~~~~~~~~lv~e~~~~~~ 139 (300)
++.|+.|.++.||++... ++.|++|+...... ......|+.+++.+.+.+++ +++... . . ..++|||+++|.+
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~-~-~-~~~lv~e~i~G~~ 77 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFD-P-E-TGVLITEFIEGSE 77 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEe-C-C-CCeEEEEecCCCc
Confidence 467899999999999875 67899999765432 22346799999988765544 454443 2 2 3479999999988
Q ss_pred HHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCc-----cccCCCCCceeecC
Q 040812 140 LEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNI-----VHRDIKPANVLINE 188 (300)
Q Consensus 140 L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i-----~H~Dlkp~Nill~~ 188 (300)
+... . .....++.+++.+|..||..++ +|+|++|+||+++.
T Consensus 78 l~~~-----~---~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~~ 123 (170)
T cd05151 78 LLTE-----D---FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLDD 123 (170)
T ss_pred cccc-----c---ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEEC
Confidence 7643 0 1123467899999999999885 99999999999983
No 443
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.31 E-value=3.3e-11 Score=96.11 Aligned_cols=134 Identities=14% Similarity=0.199 Sum_probs=94.0
Q ss_pred eeecCCcceEEEEEEEcc------CCeEEEEEEeecCC-----------CC--------CCC---------HHHHHHHHh
Q 040812 63 QVLGQGNGGTVFKVRHKQ------TLALYALKVMQCDR-----------GT--------PPN---------PQELNILRQ 108 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~------~~~~vaiK~~~~~~-----------~~--------~~~---------~~E~~~l~~ 108 (300)
..||.|-=+.||.|.... .+..+|||+.+... .. ... .+|...|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999998654 35789999985211 00 000 258888888
Q ss_pred cCC--CceeEeceeeeCCCCcEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh-HhCCccccCCCCCcee
Q 040812 109 TNS--PYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM-HSRNIVHRDIKPANVL 185 (300)
Q Consensus 109 l~h--~niv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~l-H~~~i~H~Dlkp~Nil 185 (300)
+.. -++..++++ . ..++||||+.++.+..-.-....++...+..+..+++.+|..| |..|++|+||++.||+
T Consensus 83 l~~~Gv~vP~pi~~----~-~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL 157 (197)
T cd05146 83 MQKAGIPCPEVVVL----K-KHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNML 157 (197)
T ss_pred HHHcCCCCCeEEEe----c-CCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 754 456666664 2 4579999997754432222223456667788899999999998 8999999999999999
Q ss_pred ecCCCCCCccceeecccccccc
Q 040812 186 INEKMEHPCGYSCLYESGEARH 207 (300)
Q Consensus 186 l~~~~~~~~~~~~~~~~~~~~~ 207 (300)
++.+ ...+.+++.+..
T Consensus 158 ~~~~------~v~iIDF~qav~ 173 (197)
T cd05146 158 WHDG------KVWFIDVSQSVE 173 (197)
T ss_pred EECC------cEEEEECCCcee
Confidence 9753 344556665544
No 444
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.29 E-value=2.1e-10 Score=101.26 Aligned_cols=214 Identities=14% Similarity=0.188 Sum_probs=149.1
Q ss_pred eeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCC--CHHHHHHHHhcCCCceeEeceeeeCC---CCcEEEEEeccCC
Q 040812 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPP--NPQELNILRQTNSPYIVKCHQIFTKP---SGEVSILMEYMDA 137 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~--~~~E~~~l~~l~h~niv~~~~~~~~~---~~~~~lv~e~~~~ 137 (300)
+..+.-.-.+.|++....+|..|++|.++.++.... .-.-+++++++.|.|+|++.++|... ...+++|++|.++
T Consensus 282 ~~~~~~~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~ 361 (655)
T KOG3741|consen 282 ELLNDLFSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPS 361 (655)
T ss_pred ccccccccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCC
Confidence 334433456789999999999999999954443222 23467889999999999999988632 2358999999886
Q ss_pred -CCHHHHHHh---------------CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCccceeecc
Q 040812 138 -GSLEIYVKS---------------RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCGYSCLYE 201 (300)
Q Consensus 138 -~~L~~~l~~---------------~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~~~~ 201 (300)
++|.++--. +...++..+|.++.|+..||.++|+.|+.-+-|.+.+|+++.+....+.+.+.++
T Consensus 362 s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~D 441 (655)
T KOG3741|consen 362 SPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMD 441 (655)
T ss_pred CchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEeccccee
Confidence 566554421 1246789999999999999999999999999999999999988665544433332
Q ss_pred ----cc-ccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHH
Q 040812 202 ----SG-EARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCC 276 (300)
Q Consensus 202 ----~~-~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 276 (300)
.+ +..+. -.+-|.=.||.++..|.||..--...+..+ +.. ...+-..++.+++++|.-+
T Consensus 442 vl~~d~~~~le~------~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~---~s~-------~~~I~~~yS~D~rn~v~yl 505 (655)
T KOG3741|consen 442 VLQEDPTEPLES------QQQNDLRDLGLLLLALATGTENSNRTDSTQ---SSH-------LTRITTTYSTDLRNVVEYL 505 (655)
T ss_pred eecCCCCcchhH------HhhhhHHHHHHHHHHHhhcccccccccchH---HHH-------HHHhhhhhhHHHHHHHHHH
Confidence 11 11111 237899999999999999954422211111 110 0112244678888999888
Q ss_pred hccCCCCCCCCHHHHhcC
Q 040812 277 LQKGDPSKRWTASQLLSH 294 (300)
Q Consensus 277 l~~~dp~~Rpt~~~~l~h 294 (300)
... ++++ -++++++.|
T Consensus 506 ~s~-~~~~-ksI~~llp~ 521 (655)
T KOG3741|consen 506 ESL-NFRE-KSIQDLLPM 521 (655)
T ss_pred Hhc-Cccc-ccHHHHHHH
Confidence 877 7775 677777643
No 445
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.11 E-value=4.3e-10 Score=92.37 Aligned_cols=106 Identities=18% Similarity=0.167 Sum_probs=75.2
Q ss_pred eeecCCcceEEEEEEEccCCeEEEEEEeecCCC---CCCCHHHHHHHHhcCCC--ceeEeceeeeCCC--CcEEEEEecc
Q 040812 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG---TPPNPQELNILRQTNSP--YIVKCHQIFTKPS--GEVSILMEYM 135 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~E~~~l~~l~h~--niv~~~~~~~~~~--~~~~lv~e~~ 135 (300)
+.|+.|.++.||++...+ |+.+++|+...... .....+|..+++.+.+. ++.+++.+..... +..++||||+
T Consensus 4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i 82 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV 82 (223)
T ss_pred eecCCCccceEEEEEecC-CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence 678999999999998754 57899999765432 33457899999998763 3566666544321 3568999999
Q ss_pred CCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhH
Q 040812 136 DAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMH 170 (300)
Q Consensus 136 ~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH 170 (300)
+|.++.+.+.. ..++......++.+++.+|..||
T Consensus 83 ~G~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH 116 (223)
T cd05154 83 DGRVLRDRLLR-PELSPEERRALARALADTLAALH 116 (223)
T ss_pred CCEecCCCCCC-CCCCHHHHHHHHHHHHHHHHHHh
Confidence 99888765432 24566666666777777777766
No 446
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.08 E-value=1.7e-09 Score=83.79 Aligned_cols=116 Identities=18% Similarity=0.220 Sum_probs=83.1
Q ss_pred eeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC----------CCHHHHHHHHhcCCCce--eEeceeeeCCCCcEEE
Q 040812 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP----------PNPQELNILRQTNSPYI--VKCHQIFTKPSGEVSI 130 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----------~~~~E~~~l~~l~h~ni--v~~~~~~~~~~~~~~l 130 (300)
..+++|+=+.++.+.+. |..+++|.=.+..... ...+|+.++.++.--.| ..++++ ++. ...|
T Consensus 2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dv--D~~-~~~I 76 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDV--DPD-NGLI 76 (204)
T ss_pred chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEE--cCC-CCEE
Confidence 35788999999999775 4456666522222111 12469999988765444 344444 333 5679
Q ss_pred EEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCC
Q 040812 131 LMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKM 190 (300)
Q Consensus 131 v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~ 190 (300)
+|||++|-.|.+.+... ...++..+=.-+.-||..||+|+||.++||++....
T Consensus 77 ~me~I~G~~lkd~l~~~-------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~ 129 (204)
T COG3642 77 VMEYIEGELLKDALEEA-------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR 129 (204)
T ss_pred EEEEeCChhHHHHHHhc-------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc
Confidence 99999999999898765 145666666777889999999999999999998864
No 447
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.96 E-value=6.8e-09 Score=80.32 Aligned_cols=129 Identities=19% Similarity=0.254 Sum_probs=91.0
Q ss_pred eeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC----------CCHHHHHHHHhcCCCceeEeceeeeCCCCcEEE
Q 040812 61 KLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP----------PNPQELNILRQTNSPYIVKCHQIFTKPSGEVSI 130 (300)
Q Consensus 61 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----------~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~l 130 (300)
.+..+-+|+-+.|+++.+. |+.++||.=....... ...+|++.|.+..--+|.-..-++.+.. .-+|
T Consensus 11 ~l~likQGAEArv~~~~~~--Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~-~~~i 87 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS--GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTY-GGQI 87 (229)
T ss_pred cceeeeccceeeEeeeccC--CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecC-CCeE
Confidence 4577889999999999987 6777777532222221 2246888888876544443333343433 4579
Q ss_pred EEeccCC-CCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCC
Q 040812 131 LMEYMDA-GSLEIYVKSRG--RLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEH 192 (300)
Q Consensus 131 v~e~~~~-~~L~~~l~~~~--~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~ 192 (300)
+|||++| .++.+++.... .........++++|-+.+.-||..+|+|+||..+||++.+++..
T Consensus 88 ~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~ 152 (229)
T KOG3087|consen 88 YMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQ 152 (229)
T ss_pred EEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCc
Confidence 9999977 47788886532 12223336889999999999999999999999999999877543
No 448
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.96 E-value=9.9e-09 Score=86.37 Aligned_cols=116 Identities=16% Similarity=0.138 Sum_probs=81.6
Q ss_pred eEEEEEEEccCCeEEEEEEeecCCC-----------CC--CCHHHHHHHHhcCCCce--eEeceeeeCC----CCcEEEE
Q 040812 71 GTVFKVRHKQTLALYALKVMQCDRG-----------TP--PNPQELNILRQTNSPYI--VKCHQIFTKP----SGEVSIL 131 (300)
Q Consensus 71 g~V~~~~~~~~~~~vaiK~~~~~~~-----------~~--~~~~E~~~l~~l~h~ni--v~~~~~~~~~----~~~~~lv 131 (300)
..|.++.. .|+.|.||....... .. .+.+|...+.++..-+| +.++.+.+.. ....++|
T Consensus 36 rrvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LV 113 (268)
T PRK15123 36 RRTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFII 113 (268)
T ss_pred ceEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEE
Confidence 34555544 366788886532220 11 24679888888754433 2334444321 1247899
Q ss_pred EeccCCC-CHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecC
Q 040812 132 MEYMDAG-SLEIYVKS--RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINE 188 (300)
Q Consensus 132 ~e~~~~~-~L~~~l~~--~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~ 188 (300)
||++++. +|.+++.. ....+......++.+++..+.-||+.||+|+|+++.|||++.
T Consensus 114 te~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~ 173 (268)
T PRK15123 114 TEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHL 173 (268)
T ss_pred EeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEec
Confidence 9999885 89998864 234567788899999999999999999999999999999985
No 449
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.92 E-value=6e-10 Score=101.57 Aligned_cols=135 Identities=23% Similarity=0.328 Sum_probs=92.9
Q ss_pred HHHHHhHh-CCccccCCCCCceeecCCCCCCccceee--------------ccccccc-----------cccCCCCCCch
Q 040812 164 KGLFYMHS-RNIVHRDIKPANVLINEKMEHPCGYSCL--------------YESGEAR-----------HRKHGGYNGFA 217 (300)
Q Consensus 164 ~~l~~lH~-~~i~H~Dlkp~Nill~~~~~~~~~~~~~--------------~~~~~~~-----------~~~~~~~~~~~ 217 (300)
.|+.|+|. .+++|++|.|++|.++.++..+.+++.. |+++... +...+...+.+
T Consensus 110 dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~~~~~ 189 (700)
T KOG2137|consen 110 DGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTTNTPA 189 (700)
T ss_pred chhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcccccccc
Confidence 89999995 5899999999999999987655443222 2222111 11112334568
Q ss_pred hhHHHHHHHHHHHH-hCCCCCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCC
Q 040812 218 ADIWSFGVTMMELY-MGYYPFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPF 296 (300)
Q Consensus 218 ~DiwSlG~il~ell-tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw 296 (300)
+|++|+||++|-+. .|+.-+...+.... .........-........+++++++-+.+++.. ++..||++..++..||
T Consensus 190 sd~fSlG~li~~i~~~gk~i~~a~~~~~~-~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~-~~~~rp~~~~l~~~~f 267 (700)
T KOG2137|consen 190 SDVFSLGVLIYTIYNGGKSIIAANGGLLS-YSFSRNLLNAGAFGYSNNLPSELRESLKKLLNG-DSAVRPTLDLLLSIPF 267 (700)
T ss_pred ccceeeeeEEEEEecCCcchhhccCCcch-hhhhhcccccccccccccCcHHHHHHHHHHhcC-CcccCcchhhhhcccc
Confidence 99999999999998 56666654433221 121111111222334567889999999999999 9999999999999999
Q ss_pred CCCC
Q 040812 297 LADA 300 (300)
Q Consensus 297 ~~~~ 300 (300)
|.|.
T Consensus 268 f~D~ 271 (700)
T KOG2137|consen 268 FSDP 271 (700)
T ss_pred cCCc
Confidence 9873
No 450
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.87 E-value=7.2e-09 Score=85.12 Aligned_cols=147 Identities=20% Similarity=0.205 Sum_probs=104.0
Q ss_pred eeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCC-----------------C-------CCCHHHHHHHHhcCCC--c
Q 040812 60 EKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG-----------------T-------PPNPQELNILRQTNSP--Y 113 (300)
Q Consensus 60 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----------------~-------~~~~~E~~~l~~l~h~--n 113 (300)
.++..||-|-=+.||.|.+.+ |..+|+|.-+.... . ....+|..+|.++... .
T Consensus 94 ~iG~~IGvGKEsdVY~~~~~~-g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 94 AIGTKIGVGKESDVYVAIDPK-GRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred hhccccccCccceEEEEECCC-CCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 456889999999999999985 78999998642110 0 0124699999998765 6
Q ss_pred eeEeceeeeCCCCcEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCC
Q 040812 114 IVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHP 193 (300)
Q Consensus 114 iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~ 193 (300)
+.+.+++ + ..++|||+++|-.|... +++......++..|+.-+.-+-..|++|+|+.+-||+++++
T Consensus 173 VP~P~~~----n-RHaVvMe~ieG~eL~~~-----r~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~d---- 238 (304)
T COG0478 173 VPKPIAW----N-RHAVVMEYIEGVELYRL-----RLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTED---- 238 (304)
T ss_pred CCCcccc----c-cceeeeehcccceeecc-----cCcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecC----
Confidence 7777775 2 56899999999665432 23456667777788877777778999999999999999998
Q ss_pred ccceeeccccccccccCCCC-CCchhhHHH
Q 040812 194 CGYSCLYESGEARHRKHGGY-NGFAADIWS 222 (300)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~-~~~~~DiwS 222 (300)
|+....+.|.+........ .--.-||+.
T Consensus 239 -g~~~vIDwPQ~v~~~hp~a~e~l~RDv~n 267 (304)
T COG0478 239 -GDIVVIDWPQAVPISHPDAEELLERDVEN 267 (304)
T ss_pred -CCEEEEeCcccccCCCCCHHHHHHhHHHH
Confidence 4555666766644322110 112457776
No 451
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.79 E-value=3.1e-08 Score=78.73 Aligned_cols=122 Identities=20% Similarity=0.253 Sum_probs=76.4
Q ss_pred EEEEEEEccCCeEEEEEEeecCC-----------CCCC-----------------CHHHHHHHHhcCCC--ceeEeceee
Q 040812 72 TVFKVRHKQTLALYALKVMQCDR-----------GTPP-----------------NPQELNILRQTNSP--YIVKCHQIF 121 (300)
Q Consensus 72 ~V~~~~~~~~~~~vaiK~~~~~~-----------~~~~-----------------~~~E~~~l~~l~h~--niv~~~~~~ 121 (300)
.||.|...+ +..+|+|+.+... .... ..+|...|.++..- ++.+++++.
T Consensus 1 ~Vy~~~~~~-~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAIDPD-GEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEECT-TEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEECCC-CCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 489998865 6799999985321 0001 13599999999876 466676552
Q ss_pred eCCCCcEEEEEeccC--CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHH-hHhCCccccCCCCCceeecCCCCCCcccee
Q 040812 122 TKPSGEVSILMEYMD--AGSLEIYVKSRGRLSEDIICTISRQVLKGLFY-MHSRNIVHRDIKPANVLINEKMEHPCGYSC 198 (300)
Q Consensus 122 ~~~~~~~~lv~e~~~--~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~-lH~~~i~H~Dlkp~Nill~~~~~~~~~~~~ 198 (300)
..++||||++ |..+..+.... ++......++.+++..+.. +|..||+|+||.+.||+++.+. ..
T Consensus 80 -----~~~ivME~I~~~G~~~~~l~~~~--~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~~------~~ 146 (188)
T PF01163_consen 80 -----RNVIVMEYIGEDGVPLPRLKDVD--LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDGK------VY 146 (188)
T ss_dssp -----TTEEEEE--EETTEEGGCHHHCG--GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETTC------EE
T ss_pred -----CCEEEEEecCCCccchhhHHhcc--ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecce------EE
Confidence 2369999998 65555444321 2245567788888885555 5799999999999999998862 33
Q ss_pred ecccccccc
Q 040812 199 LYESGEARH 207 (300)
Q Consensus 199 ~~~~~~~~~ 207 (300)
..+++.+..
T Consensus 147 iIDf~qav~ 155 (188)
T PF01163_consen 147 IIDFGQAVD 155 (188)
T ss_dssp E--GTTEEE
T ss_pred EEecCccee
Confidence 445554443
No 452
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.78 E-value=1.2e-07 Score=77.08 Aligned_cols=92 Identities=14% Similarity=0.168 Sum_probs=71.6
Q ss_pred CHHHHHHHHhcCCCc--eeEeceeeeCCC---CcEEEEEeccCC-CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhC
Q 040812 99 NPQELNILRQTNSPY--IVKCHQIFTKPS---GEVSILMEYMDA-GSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSR 172 (300)
Q Consensus 99 ~~~E~~~l~~l~h~n--iv~~~~~~~~~~---~~~~lv~e~~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~ 172 (300)
..+|...+..+..-+ +...+++.+... ...++|+|++++ .+|.+++.....++......++.+++..+.-||+.
T Consensus 58 a~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH~~ 137 (206)
T PF06293_consen 58 AKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKLHDA 137 (206)
T ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHC
Confidence 356888877775433 334444443322 136899999988 48999998755577788899999999999999999
Q ss_pred CccccCCCCCceeecCCC
Q 040812 173 NIVHRDIKPANVLINEKM 190 (300)
Q Consensus 173 ~i~H~Dlkp~Nill~~~~ 190 (300)
||+|+|+++.|||++.+.
T Consensus 138 gi~H~Dl~~~NILv~~~~ 155 (206)
T PF06293_consen 138 GIYHGDLNPSNILVDPDD 155 (206)
T ss_pred cCCCCCCCcccEEEeCCC
Confidence 999999999999999875
No 453
>PRK09902 hypothetical protein; Provisional
Probab=98.50 E-value=1.7e-06 Score=69.41 Aligned_cols=124 Identities=15% Similarity=0.082 Sum_probs=87.0
Q ss_pred ecCCcceEEEEEEEccCCeEEEEEEeec--------CCCCCCCHHHHHHHHhcCCCc--eeEeceee-e-CC-CCcEEEE
Q 040812 65 LGQGNGGTVFKVRHKQTLALYALKVMQC--------DRGTPPNPQELNILRQTNSPY--IVKCHQIF-T-KP-SGEVSIL 131 (300)
Q Consensus 65 lg~G~~g~V~~~~~~~~~~~vaiK~~~~--------~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~-~-~~-~~~~~lv 131 (300)
-|+||-+-|+.....+. .+=+|.-.+ ......+.+|+..+.++..-+ +.+....- . .+ .-..+||
T Consensus 26 ~~rgG~SgV~r~~~~g~--~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVERNGK--KLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEeCCc--EEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEE
Confidence 45688888888765532 455665431 113344578999999886533 33443211 1 11 1136799
Q ss_pred EeccCC-CCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCC
Q 040812 132 MEYMDA-GSLEIYVKSR--GRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKM 190 (300)
Q Consensus 132 ~e~~~~-~~L~~~l~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~ 190 (300)
+|-++| .+|.+++.+. .+.+......++.+++..++-||+.|+.|+|+.+.||+++.++
T Consensus 104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g 165 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEG 165 (216)
T ss_pred EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCC
Confidence 997764 6898888653 3467788889999999999999999999999999999998654
No 454
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.48 E-value=4.6e-06 Score=72.74 Aligned_cols=227 Identities=14% Similarity=0.188 Sum_probs=135.9
Q ss_pred eeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHhc-CCCceeEecee-----e-eCCCCcEEEEE
Q 040812 60 EKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQT-NSPYIVKCHQI-----F-TKPSGEVSILM 132 (300)
Q Consensus 60 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~-----~-~~~~~~~~lv~ 132 (300)
...+.||+|+-+.+|-.-...+ . +.|+......... .+.+..|.+. .||-+-.-+.| + .+....+-++|
T Consensus 14 ~~gr~LgqGgea~ly~l~e~~d--~-VAKIYh~Pppa~~-aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm 89 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEVRD--Q-VAKIYHAPPPAAQ-AQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM 89 (637)
T ss_pred CCCccccCCccceeeecchhhc--h-hheeecCCCchHH-HHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence 3457899999999996544322 3 4477654332211 2233333332 45533321111 1 12122367888
Q ss_pred eccCCC-CHHHHHHh------CCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCCcc----------
Q 040812 133 EYMDAG-SLEIYVKS------RGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHPCG---------- 195 (300)
Q Consensus 133 e~~~~~-~L~~~l~~------~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~~~---------- 195 (300)
..+.+. -+..+... .....+..+....+.++.+..-||+.|..-+|+.++|+|++++.....-
T Consensus 90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~n 169 (637)
T COG4248 90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQINAN 169 (637)
T ss_pred ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcccceeeccC
Confidence 888774 23333321 2246789999999999999999999999999999999999876442110
Q ss_pred --------ceeeccccccccc--cCCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCC---CCchHHH-HHHHH-------
Q 040812 196 --------YSCLYESGEARHR--KHGGYNGFAADIWSFGVTMMELYMG-YYPFLEPG---QEPDFLS-LMLAI------- 253 (300)
Q Consensus 196 --------~~~~~~~~~~~~~--~~~~~~~~~~DiwSlG~il~elltg-~~pf~~~~---~~~~~~~-~~~~~------- 253 (300)
+..-|.+||.... ..|-..+...|-|.||+++++++.| +.||.+.. ....-.+ .+...
T Consensus 170 g~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~ 249 (637)
T COG4248 170 GTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASD 249 (637)
T ss_pred CceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechh
Confidence 1233556655431 2233445689999999999999876 99996532 1111111 11110
Q ss_pred ---hhCC-CCCCC-CCCChHHHHHHHHHhccC-CCCCCCCHHH
Q 040812 254 ---CFRE-PPSLP-ECSSEKFRDFIRCCLQKG-DPSKRWTASQ 290 (300)
Q Consensus 254 ---~~~~-~~~~~-~~~~~~l~~li~~~l~~~-dp~~Rpt~~~ 290 (300)
.... +...| +.+++.+..+..+|.... ++.-|||++.
T Consensus 250 ~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~a 292 (637)
T COG4248 250 QRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKA 292 (637)
T ss_pred ccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHH
Confidence 0001 11122 345788999999999763 4668999764
No 455
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.43 E-value=1.5e-06 Score=70.06 Aligned_cols=124 Identities=16% Similarity=0.235 Sum_probs=78.9
Q ss_pred CcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCC-----------CCHHHHHHHHhcCCCcee---Eeceeee
Q 040812 57 SQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTP-----------PNPQELNILRQTNSPYIV---KCHQIFT 122 (300)
Q Consensus 57 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----------~~~~E~~~l~~l~h~niv---~~~~~~~ 122 (300)
.+|...+.+-......|.+-.-. |+.+++|..+...... ...+++..+.+++..++. .++-+.+
T Consensus 31 ~~~~~~kv~k~~~r~~ValIei~--~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~e 108 (229)
T PF06176_consen 31 NNYKIIKVFKNTKRNYVALIEID--GKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAE 108 (229)
T ss_pred CCceEEEeecCCCccEEEEEEEC--CcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeee
Confidence 46777888888887777766554 6788999876533211 012334444444332222 2222211
Q ss_pred CC----CCcEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCC
Q 040812 123 KP----SGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKM 190 (300)
Q Consensus 123 ~~----~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~ 190 (300)
.. ....++||||++|..|.++.. +++ .+...+.+++.-||+.|+.|+|..|+|++++.++
T Consensus 109 kk~~~~~~~~~ll~EYIeG~~l~d~~~----i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~~ 172 (229)
T PF06176_consen 109 KKIFRYTSSYVLLMEYIEGVELNDIED----IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNNG 172 (229)
T ss_pred eeeccceeEEEEEEEEecCeecccchh----cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEECCc
Confidence 11 114568999999988876543 232 2456677889999999999999999999998764
No 456
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.20 E-value=2.7e-05 Score=71.36 Aligned_cols=132 Identities=15% Similarity=0.180 Sum_probs=81.6
Q ss_pred eeecCCcceEEEEEEEccCCeEEEEEEeecCCC---------------------CC---------------------CCH
Q 040812 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG---------------------TP---------------------PNP 100 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---------------------~~---------------------~~~ 100 (300)
..|+.++-|+||.|+.++ |+.||||+.+.+-. .. +..
T Consensus 131 ~PiAsASIaQVH~A~L~s-G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 131 EPIASASIAQVHRAVLKS-GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CchhhhhHhhheeEEecC-CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 679999999999999987 89999999753210 00 012
Q ss_pred HHHHHHHhcC-----CCceeEeceeeeCCCCcEEEEEeccCCCCHHHHH--HhCCCCCHHHHHHHHHHHHHH-HHHhHhC
Q 040812 101 QELNILRQTN-----SPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYV--KSRGRLSEDIICTISRQVLKG-LFYMHSR 172 (300)
Q Consensus 101 ~E~~~l~~l~-----h~niv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l--~~~~~l~~~~~~~i~~qi~~~-l~~lH~~ 172 (300)
+|...+.+++ .+++. +=.++.+-.+.-.++|||++|-.+.+.. +. ..++.+.+ +..++.+ +..+-..
T Consensus 210 ~EA~n~~~~~~nf~~~~~v~-VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~i---a~~~~~~f~~q~~~d 284 (517)
T COG0661 210 REAANAERFRENFKDDPDVY-VPKVYWEYTTRRVLTMEWIDGIKISDIAALKS-AGIDRKEL---AELLVRAFLRQLLRD 284 (517)
T ss_pred HHHHHHHHHHHHcCCCCCeE-eceeehhccCCcEEEEEeeCCEecccHHHHHh-cCCCHHHH---HHHHHHHHHHHHHhc
Confidence 3555554442 23332 2222222123567999999998888774 33 33453333 2222222 2333358
Q ss_pred CccccCCCCCceeecCCCCCCccceeecccccc
Q 040812 173 NIVHRDIKPANVLINEKMEHPCGYSCLYESGEA 205 (300)
Q Consensus 173 ~i~H~Dlkp~Nill~~~~~~~~~~~~~~~~~~~ 205 (300)
|++|.|..|.||+++.++ ....++++..
T Consensus 285 gffHaDpHpGNi~v~~~g-----~i~~lDfGi~ 312 (517)
T COG0661 285 GFFHADPHPGNILVRSDG-----RIVLLDFGIV 312 (517)
T ss_pred CccccCCCccceEEecCC-----cEEEEcCcce
Confidence 999999999999999984 3444455443
No 457
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.15 E-value=1.8e-05 Score=65.23 Aligned_cols=72 Identities=15% Similarity=0.229 Sum_probs=51.0
Q ss_pred eeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHhcCCCce--eEeceeeeCCCCcEEEEEeccCCCC
Q 040812 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYI--VKCHQIFTKPSGEVSILMEYMDAGS 139 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~h~ni--v~~~~~~~~~~~~~~lv~e~~~~~~ 139 (300)
..||+|..+.||+.. +..+++|............+|.++++.+..-++ .+.+++.... +...+|||+++|.+
T Consensus 7 ~~i~~G~t~~~y~~~----~~~~VlR~~~~~~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~-~~~glv~e~i~G~~ 80 (226)
T TIGR02172 7 TQTGEGGNGESYTHK----TGKWMLKLYNPGFDKETIKREFDASRKVFSLGIPTPHPFDLVEDG-GRLGLIYELIVGKR 80 (226)
T ss_pred eeecCCCCcceeEec----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHcCCCCCceEEEEecC-CeeeeeeeecCCcc
Confidence 568999999999842 446778987654433345779999988865443 5566665444 36789999999863
No 458
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=98.15 E-value=0.0001 Score=58.93 Aligned_cols=114 Identities=29% Similarity=0.384 Sum_probs=81.0
Q ss_pred CcceeeeeecCCcc-eEEEEEEEccCCeEEEEEEeecC-----------------------CCCCCCHHHHHHHHhcC--
Q 040812 57 SQLEKLQVLGQGNG-GTVFKVRHKQTLALYALKVMQCD-----------------------RGTPPNPQELNILRQTN-- 110 (300)
Q Consensus 57 ~~y~~~~~lg~G~~-g~V~~~~~~~~~~~vaiK~~~~~-----------------------~~~~~~~~E~~~l~~l~-- 110 (300)
.+++.++.||.|.- |.||+++-. |+.||+|+++.- ....++..|.+...+++
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I~--g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~ 114 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEID--GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA 114 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEEC--CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence 67899999999999 999999987 679999994320 01123456777776664
Q ss_pred -CCce--eEeceeeeCC-----------------CCcEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhH
Q 040812 111 -SPYI--VKCHQIFTKP-----------------SGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMH 170 (300)
Q Consensus 111 -h~ni--v~~~~~~~~~-----------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH 170 (300)
+.++ |+.+||..-. .....||.||.+... .++. .-+.+|++-+..+|
T Consensus 115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~---------~~~~----~~~~~~~~dl~~~~ 181 (207)
T PF13095_consen 115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP---------PLQI----RDIPQMLRDLKILH 181 (207)
T ss_pred cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc---------ccch----hHHHHHHHHHHHHH
Confidence 4455 8888886321 012457888876643 1222 33567777888999
Q ss_pred hCCccccCCCCCcee
Q 040812 171 SRNIVHRDIKPANVL 185 (300)
Q Consensus 171 ~~~i~H~Dlkp~Nil 185 (300)
..||+-+|+++.|..
T Consensus 182 k~gI~~~Dv~~~ny~ 196 (207)
T PF13095_consen 182 KLGIVPRDVKPRNYR 196 (207)
T ss_pred HCCeeeccCcccccc
Confidence 999999999999975
No 459
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.13 E-value=1.8e-05 Score=64.69 Aligned_cols=121 Identities=15% Similarity=0.223 Sum_probs=81.0
Q ss_pred eeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC-----------CCC---------------HHHHHHHHhcCC--Cc
Q 040812 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT-----------PPN---------------PQELNILRQTNS--PY 113 (300)
Q Consensus 62 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----------~~~---------------~~E~~~l~~l~h--~n 113 (300)
...|.+|--+.||+|... ++..+|+|+++..... ..| ..|...|+++.. -.
T Consensus 53 ~g~istGKEA~Vy~a~~~-~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVr 131 (268)
T COG1718 53 VGCISTGKEANVYLAETG-DGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVR 131 (268)
T ss_pred EeeecCCcceEEEeeccC-CCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 457888999999999874 4789999998643211 000 236666666643 34
Q ss_pred eeEeceeeeCCCCcEEEEEeccCCCCH-HHHHHhCCCCCHHHHHHHHHHHHHHHHHhHh-CCccccCCCCCceeecCC
Q 040812 114 IVKCHQIFTKPSGEVSILMEYMDAGSL-EIYVKSRGRLSEDIICTISRQVLKGLFYMHS-RNIVHRDIKPANVLINEK 189 (300)
Q Consensus 114 iv~~~~~~~~~~~~~~lv~e~~~~~~L-~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~-~~i~H~Dlkp~Nill~~~ 189 (300)
+.+.+.+. ...|||||+....+ .=.|++ ..+...++..+..+++..+.-|-. .+++|+||..-|||+.++
T Consensus 132 vP~Pi~~~-----~nVLvMEfIg~~g~pAP~LkD-v~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~~~ 203 (268)
T COG1718 132 VPEPIAFR-----NNVLVMEFIGDDGLPAPRLKD-VPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVHDG 203 (268)
T ss_pred CCCceeec-----CCeEEEEeccCCCCCCCCccc-CCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEECC
Confidence 44555542 34699999965311 111111 123344788899999999998876 999999999999999853
No 460
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.05 E-value=1.6e-05 Score=61.61 Aligned_cols=116 Identities=24% Similarity=0.230 Sum_probs=83.6
Q ss_pred ceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHhcCCCceeE-eceeeeCCCCcEEEEEeccCC
Q 040812 59 LEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVK-CHQIFTKPSGEVSILMEYMDA 137 (300)
Q Consensus 59 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~h~niv~-~~~~~~~~~~~~~lv~e~~~~ 137 (300)
.++.+.||+|++|.||++.+. |..+|+|+-+.+........|+++|..++-.++.. ++.+ . ..++.|||+.|
T Consensus 24 ~~v~~~L~KG~~s~Vyl~~~~--~~~~a~Kvrr~ds~r~~l~kEakiLeil~g~~~~p~vy~y-g----~~~i~me~i~G 96 (201)
T COG2112 24 LRVEKELAKGTTSVVYLGEWR--GGEVALKVRRRDSPRRNLEKEAKILEILAGEGVTPEVYFY-G----EDFIRMEYIDG 96 (201)
T ss_pred hhhhhhhhcccccEEEEeecc--CceEEEEEecCCcchhhHHHHHHHHHHhhhcCCCceEEEe-c----hhhhhhhhhcC
Confidence 456788999999999999998 45899999887777777788999999998777654 4443 2 23466999999
Q ss_pred CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCC-CC-ceeecC
Q 040812 138 GSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIK-PA-NVLINE 188 (300)
Q Consensus 138 ~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlk-p~-Nill~~ 188 (300)
-.|.+.-... + +.-+..++.+-.-|-..||-|..|. |. ||++.+
T Consensus 97 ~~L~~~~~~~---~----rk~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~ 142 (201)
T COG2112 97 RPLGKLEIGG---D----RKHLLRVLEKAYKLDRLGIEHGELSRPWKNVLVND 142 (201)
T ss_pred cchhhhhhcc---c----HHHHHHHHHHHHHHHHhccchhhhcCCceeEEecC
Confidence 8887655421 2 2233445555445567899999987 33 555554
No 461
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=98.05 E-value=3.2e-06 Score=75.63 Aligned_cols=162 Identities=20% Similarity=0.317 Sum_probs=97.7
Q ss_pred HHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCC
Q 040812 100 PQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDI 179 (300)
Q Consensus 100 ~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dl 179 (300)
.....+++.++|+|+..++++.........+|||++. .+|++++..+. +-.. +++ .+++.|-
T Consensus 30 lgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~~-~Sled~~~~~~-l~~~-------s~~-------~~~~~~~-- 91 (725)
T KOG1093|consen 30 LGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHYT-MSLEDILKTGN-LKDE-------SLL-------AHGVLHL-- 91 (725)
T ss_pred hhhhHHHHhhcCccceeeEeeecCccceEEEEehhhc-cchHHHHHhcc-cchh-------hhc-------cccccee--
Confidence 3466778888999999999987655556889999995 49999987653 1110 000 2222222
Q ss_pred CCCceeecCCCCCCccceeeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCC
Q 040812 180 KPANVLINEKMEHPCGYSCLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPP 259 (300)
Q Consensus 180 kp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 259 (300)
|++...+ .....+.. ..++|+||||+|.|+.|+.-|..-+...... +....+.........
T Consensus 92 ---~~~~~td-----~~~t~~~~----------~~~pKsdVwsl~~i~~el~L~~~l~~~~~~s-~~l~~i~k~~~~d~~ 152 (725)
T KOG1093|consen 92 ---NIIYITD-----HFLTKYPS----------PIGPKSDVWSLGFIILELYLGISLEAELTES-EYLEILLKYYTDDQE 152 (725)
T ss_pred ---hhhhccc-----cccccCCC----------CCCcchhhhhHHHHHHHHHHhhHHHHHHHHH-HHHHHHHHhccCchh
Confidence 2222111 00001111 1225999999999999999987776432221 111222111100000
Q ss_pred --------CCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 260 --------SLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 260 --------~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
.+...++....++...|+.. .|..||...++.+++-|.+
T Consensus 153 ~~~~a~e~~~~~~~d~~~~~~~~~c~~~-~~~ir~l~~~~~k~~i~~e 199 (725)
T KOG1093|consen 153 LLSTAMEHLIQLLADKKRLPLLKKCLWL-EPIIRPLPMELSKRCSFTE 199 (725)
T ss_pred HHHHHHHHHHHHhhhHhHHHHhccCCcc-ccccccchhHHhcCccHHH
Confidence 11223466778899999999 9999999999999887654
No 462
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.05 E-value=1.3e-05 Score=77.85 Aligned_cols=181 Identities=20% Similarity=0.301 Sum_probs=114.7
Q ss_pred HHHHHHhcCCCceeEeceeeeCCC--C-cEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccC
Q 040812 102 ELNILRQTNSPYIVKCHQIFTKPS--G-EVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRD 178 (300)
Q Consensus 102 E~~~l~~l~h~niv~~~~~~~~~~--~-~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~D 178 (300)
|+..+.++.|+|++.++.+..... + ...+.-++|..-++...+..-+..+...++.+..+++.||.++|+....|.-
T Consensus 232 e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~~l~~v~ 311 (1351)
T KOG1035|consen 232 ELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSLSLEHVV 311 (1351)
T ss_pred HHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHhccceeE
Confidence 677788899999999988865433 1 1234567899999999998888899999999999999999999988444433
Q ss_pred CCCC---ceeecCCCCCCccc-----e---------------eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCC
Q 040812 179 IKPA---NVLINEKMEHPCGY-----S---------------CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYY 235 (300)
Q Consensus 179 lkp~---Nill~~~~~~~~~~-----~---------------~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~ 235 (300)
+..+ +--.+..+....+. . ..+.+++..... ....+...|+|.+|.....+..|..
T Consensus 312 L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~~~-~~~~~r~~dL~~lgll~~~~~~~~~ 390 (1351)
T KOG1035|consen 312 LSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLKEN-TAKKSRLTDLWCLGLLLLQLSQGED 390 (1351)
T ss_pred EecccccccccCccceeecchhhhcccccCCCcccchhhcCccccccccccccc-cchhhhhhHHHHHHHHHhhhhhcCc
Confidence 3222 11111111111110 0 000011110000 0111224699999999999988755
Q ss_pred CCCCCCCCchHHHHHHHHhhCCCCCCCCCCChHHHHHHHHHhccCCCCCCCCHHHHhcCCCCC
Q 040812 236 PFLEPGQEPDFLSLMLAICFREPPSLPECSSEKFRDFIRCCLQKGDPSKRWTASQLLSHPFLA 298 (300)
Q Consensus 236 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~dp~~Rpt~~~~l~hpw~~ 298 (300)
+-..... . ...++......+.+...+|+.. ++++|+++.+++.|+|.+
T Consensus 391 i~~~~~~-------~-------~~~l~~~~~~~~~d~~~~~~~~-~~~~Rl~~~~ll~~~f~~ 438 (1351)
T KOG1035|consen 391 ISEKSAV-------P-------VSLLDVLSTSELLDALPKCLDE-DSEERLSALELLTHPFLR 438 (1351)
T ss_pred ccccccc-------h-------hhhhccccchhhhhhhhhhcch-hhhhccchhhhhhchhcc
Confidence 5321111 0 0111222222678899999998 999999999999999975
No 463
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.99 E-value=8.3e-05 Score=59.72 Aligned_cols=121 Identities=21% Similarity=0.325 Sum_probs=84.2
Q ss_pred eeeecCCcceEEEEEEEccCCeEEEEEEeecCC------------------CCCCCHHHHHHHHhcC------CCceeEe
Q 040812 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDR------------------GTPPNPQELNILRQTN------SPYIVKC 117 (300)
Q Consensus 62 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------------------~~~~~~~E~~~l~~l~------h~niv~~ 117 (300)
...||+|+.-.||.--+. ....||+..... ......+|+.....+. +..|.++
T Consensus 6 ~~~i~~G~~R~cy~HP~d---p~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~ 82 (199)
T PF10707_consen 6 SDLIAQGGERDCYQHPDD---PNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF 82 (199)
T ss_pred CcccccCCCceEEECCCC---CCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence 356999999999954433 235789887655 1223356777666665 6789999
Q ss_pred ceeeeCCCCcEEEEEeccCC------CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCC
Q 040812 118 HQIFTKPSGEVSILMEYMDA------GSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKME 191 (300)
Q Consensus 118 ~~~~~~~~~~~~lv~e~~~~------~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~ 191 (300)
+|+.+++. -.-+|+|.+.+ -+|.+++... .++. .. ...+-.-..+|-+.+|+.+|++|.||++.....
T Consensus 83 ~G~veT~~-G~Glv~e~I~d~dG~~s~TL~~~l~~~-~~~~-~~---~~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~ 156 (199)
T PF10707_consen 83 YGFVETNL-GLGLVVELIRDADGNISPTLEDYLKEG-GLTE-EL---RQALDEFKRYLLDHHIVIRDLNPHNIVVQRRDS 156 (199)
T ss_pred eEEEecCC-ceEEEEEEEECCCCCcCccHHHHHHcC-CccH-HH---HHHHHHHHHHHHHcCCeecCCCcccEEEEecCC
Confidence 99988876 46788888643 3678888554 4554 33 333334456778899999999999999987644
No 464
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=97.79 E-value=0.00021 Score=65.46 Aligned_cols=120 Identities=18% Similarity=0.181 Sum_probs=75.8
Q ss_pred eeecCCcceEEEEEEEccCCeEEEEEEeecCCC---------------------------------------CCCCHHHH
Q 040812 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRG---------------------------------------TPPNPQEL 103 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---------------------------------------~~~~~~E~ 103 (300)
+.||.-+.|.||+|+.+. |+.||||+-+..-. .-++.+|+
T Consensus 167 ~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA 245 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA 245 (538)
T ss_pred chhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence 679999999999999987 99999998643210 00122344
Q ss_pred HHHHh----cCCCc------eeEeceeeeCCCCcEEEEEeccCCCCHHHH--HHhCCCCCHHHHHHHHHHHHHHHHH-hH
Q 040812 104 NILRQ----TNSPY------IVKCHQIFTKPSGEVSILMEYMDAGSLEIY--VKSRGRLSEDIICTISRQVLKGLFY-MH 170 (300)
Q Consensus 104 ~~l~~----l~h~n------iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~--l~~~~~l~~~~~~~i~~qi~~~l~~-lH 170 (300)
+...+ +.|-+ |.+++-.+ .+...|+||||+|..+.+. +.+. .++...+ +..+.++... |=
T Consensus 246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~~---st~RVLtME~~~G~~i~Dl~~i~~~-gi~~~~i---~~~l~~~~~~qIf 318 (538)
T KOG1235|consen 246 KNAERFRENFKDFSLLTYVLVPKVYWDL---STKRVLTMEYVDGIKINDLDAIDKR-GISPHDI---LNKLVEAYLEQIF 318 (538)
T ss_pred HhHHHHHHHHHhcccccceeCCeehhhc---CcceEEEEEecCCccCCCHHHHHHc-CCCHHHH---HHHHHHHHHHHHH
Confidence 43332 34544 33443332 3356899999999777544 3333 3554433 3333333222 23
Q ss_pred hCCccccCCCCCceeecCCC
Q 040812 171 SRNIVHRDIKPANVLINEKM 190 (300)
Q Consensus 171 ~~~i~H~Dlkp~Nill~~~~ 190 (300)
..|++|+|=.|.||++..+.
T Consensus 319 ~~GffHaDPHPGNilv~~~~ 338 (538)
T KOG1235|consen 319 KTGFFHADPHPGNILVRPNP 338 (538)
T ss_pred hcCCccCCCCCCcEEEecCC
Confidence 57899999999999999643
No 465
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=97.75 E-value=1.5e-06 Score=79.35 Aligned_cols=221 Identities=19% Similarity=0.122 Sum_probs=138.1
Q ss_pred cceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHhcCCCc-eeEeceeeeCCCCcEEEEEeccC
Q 040812 58 QLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPY-IVKCHQIFTKPSGEVSILMEYMD 136 (300)
Q Consensus 58 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~~lv~e~~~ 136 (300)
-++.....++|+++++++.+...+...+ .+.+... ....-++++|.+++||| .+..++-++.+. +.+++++++.
T Consensus 243 ws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~---l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~-~~~i~~~i~s 317 (829)
T KOG0576|consen 243 WSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT---LSRRLAIELLDKVNNPNPVVRYLEDYDGED-YLWIPMRICS 317 (829)
T ss_pred chHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc---hhhHHHHHHHHHccCCCCcccccccCCccc-ccchhhhhhc
Confidence 3556677899999999999887655444 6665443 23345899999999999 666666665544 8999999998
Q ss_pred CC-CHHHHH-HhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCCC--cc---------------ce
Q 040812 137 AG-SLEIYV-KSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEHP--CG---------------YS 197 (300)
Q Consensus 137 ~~-~L~~~l-~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~~--~~---------------~~ 197 (300)
++ +-...+ ...-.+.......+.+.-..+++++|+.-=+|+| ||+..+..... .+ ++
T Consensus 318 ~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~~~~~~~~~~v~~~L~~~~~~~t~~~~ 393 (829)
T KOG0576|consen 318 TGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGSEEEVKLLDFAVPPQLTRTMKPRTAIGT 393 (829)
T ss_pred CCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----cccccccccccccccCCcccCcccccccCCCC
Confidence 87 222111 1111344555666777778899999988778998 78776542211 11 11
Q ss_pred eeccccccccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhhCCCCCCC-----CCCC-hHHHH
Q 040812 198 CLYESGEARHRKHGGYNGFAADIWSFGVTMMELYMGYYPFLEPGQEPDFLSLMLAICFREPPSLP-----ECSS-EKFRD 271 (300)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~l~~ 271 (300)
..+.+| +....+.+..+.|.||+|+--.+|.-|.+|-..+..... . + +..+..+ ...+ ..-.+
T Consensus 394 ~~~~~p---ev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~P~~~~~----~--~--g~~p~s~~L~~~~aw~~~~~~~ 462 (829)
T KOG0576|consen 394 PEPLAP---EVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSSPPAVLP----M--I--GNGPNSPMLTDKSAWSPVFHRD 462 (829)
T ss_pred CCCCCc---hhhcccccccCCCccCCCcchhhcCCCCCCCCCCccccC----C--C--CCCCCccccchhhhcCcccccC
Confidence 112222 222344555688999999888888888777643211100 0 0 0000000 0011 11124
Q ss_pred HHHHHhccCCCCCCCCHHHHhcCCCCCC
Q 040812 272 FIRCCLQKGDPSKRWTASQLLSHPFLAD 299 (300)
Q Consensus 272 li~~~l~~~dp~~Rpt~~~~l~hpw~~~ 299 (300)
+...|+.. .|..|+...+++.|.+|+.
T Consensus 463 ~~~~~~~g-~P~~pkv~mgacfsKvfng 489 (829)
T KOG0576|consen 463 FPAPCLNG-LPPTPKVHMGACFSKVFNG 489 (829)
T ss_pred CcccccCC-CCCCCcchhhHHHHHHhcc
Confidence 77788888 8999999999998888764
No 466
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=97.71 E-value=0.00047 Score=57.51 Aligned_cols=76 Identities=16% Similarity=0.103 Sum_probs=51.4
Q ss_pred eecCCcc-eEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHhcC-CCceeEeceeeeCCCCcEEEEEeccCCCCHH
Q 040812 64 VLGQGNG-GTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTN-SPYIVKCHQIFTKPSGEVSILMEYMDAGSLE 141 (300)
Q Consensus 64 ~lg~G~~-g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~lv~e~~~~~~L~ 141 (300)
.|..|.+ +.||+.... +..+.+|...... .....+|+.+++.+. +--+.+++++.... +..++|||+++|.+|.
T Consensus 5 ~~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~-~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~-~~~~lv~e~i~G~~l~ 80 (244)
T cd05150 5 RVTEGQSGATVYRLDGK--NPGLYLKIAPSGP-TYELEREAERLRWLAGKLPVPEVIDYGSDD-GRAWLLTSAVPGVPAA 80 (244)
T ss_pred ecCCCCCcCeEEEEcCC--CCcEEEEecCCCc-ccchHHHHHHHHHHHhcCCCCeEEEEEecC-CccEEEEEeeCCccHh
Confidence 3455555 788998764 3577889876543 334567999988874 33355677765543 4678999999998776
Q ss_pred HH
Q 040812 142 IY 143 (300)
Q Consensus 142 ~~ 143 (300)
..
T Consensus 81 ~~ 82 (244)
T cd05150 81 AL 82 (244)
T ss_pred Hh
Confidence 43
No 467
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.68 E-value=0.00015 Score=60.20 Aligned_cols=73 Identities=5% Similarity=-0.008 Sum_probs=44.8
Q ss_pred eeecCCcceE-EEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHhcCCC---ceeEeceeeeCCC--CcEEEEEeccC
Q 040812 63 QVLGQGNGGT-VFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSP---YIVKCHQIFTKPS--GEVSILMEYMD 136 (300)
Q Consensus 63 ~~lg~G~~g~-V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~--~~~~lv~e~~~ 136 (300)
+.|+.|+... ||+.. ..+++|+.+.........+|..++..+... -+.++++...... +..|++|++++
T Consensus 3 ~~~~~gG~~n~vy~~~-----~~~VlR~~~~~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i~ 77 (235)
T cd05155 3 EPVDSGGTDNATFRLG-----DDMSVRLPSAAGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWLE 77 (235)
T ss_pred eeccCCCcccceEEcC-----CceEEEcCCccchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEeec
Confidence 5677777774 88762 246788765433333456799999887532 2334444332221 24589999999
Q ss_pred CCCH
Q 040812 137 AGSL 140 (300)
Q Consensus 137 ~~~L 140 (300)
|.++
T Consensus 78 G~~l 81 (235)
T cd05155 78 GETA 81 (235)
T ss_pred CCCC
Confidence 8766
No 468
>PRK10593 hypothetical protein; Provisional
Probab=97.51 E-value=0.00085 Score=57.75 Aligned_cols=105 Identities=13% Similarity=0.102 Sum_probs=68.3
Q ss_pred eeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHhcCC---CceeEeceeeeCC--CCcEEEEEec
Q 040812 60 EKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNS---PYIVKCHQIFTKP--SGEVSILMEY 134 (300)
Q Consensus 60 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~~~--~~~~~lv~e~ 134 (300)
.-.+.||.|..+.||.....+ + .+.+|..+.......+..|...|+.+.. -.+.++++++... .+..++|||+
T Consensus 17 ~~~~~i~~G~~~~vy~~~~~~-~-~~~~k~~~~~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~ 94 (297)
T PRK10593 17 SRVECISEQPYAALWALYDSQ-G-NPMPLMARSFSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLER 94 (297)
T ss_pred heeeecCCccceeEEEEEcCC-C-CEEEEEecccccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEec
Confidence 445789999999999986543 3 4667875432234466889999988853 3567777765432 3468999999
Q ss_pred cCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHh
Q 040812 135 MDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHS 171 (300)
Q Consensus 135 ~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~ 171 (300)
++|.++.+. ..+......+..+++.+|..||+
T Consensus 95 i~G~~~~~~-----~~~~~~~~~l~~~l~~~La~LH~ 126 (297)
T PRK10593 95 LRGVSVEAP-----ARTPERWEQLKDQIVEGLLAWHR 126 (297)
T ss_pred cCCEecCCC-----CCCHHHHHHHHHHHHHHHHHHhC
Confidence 999876541 12223334445555556665654
No 469
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.35 E-value=0.0014 Score=56.89 Aligned_cols=125 Identities=15% Similarity=0.214 Sum_probs=85.8
Q ss_pred eeeeecCCcceEEEEEEEccCCeEEEEEEeecCC--------C-CCC-------------------CHHHHHHHHhcCCC
Q 040812 61 KLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDR--------G-TPP-------------------NPQELNILRQTNSP 112 (300)
Q Consensus 61 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------~-~~~-------------------~~~E~~~l~~l~h~ 112 (300)
+-.+|..|--+.||.|.... |..+|||+++..- . ... ...|+..|.+++..
T Consensus 148 inGCiSTGKEANVYHat~~d-G~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a 226 (520)
T KOG2270|consen 148 INGCISTGKEANVYHATEED-GSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA 226 (520)
T ss_pred cccccccCccceeEeeecCC-CceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 44678899999999987765 6779999986211 0 000 12377778887766
Q ss_pred ceeEeceeeeCCCCcEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh-HhCCccccCCCCCceeecCC
Q 040812 113 YIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM-HSRNIVHRDIKPANVLINEK 189 (300)
Q Consensus 113 niv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~l-H~~~i~H~Dlkp~Nill~~~ 189 (300)
+|.-.--+.. . ...|||+|+.......=.-....++...+..+-.|++.-++-| |.++++|.||.--|+|+.++
T Consensus 227 GIP~PePIlL--k-~hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~LyhdG 301 (520)
T KOG2270|consen 227 GIPCPEPILL--K-NHVLVMEFLGRDGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLYHDG 301 (520)
T ss_pred CCCCCCceee--e-cceEeeeeccCCCCcCcccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheEECC
Confidence 6543322222 1 3569999996432221112234578888999999999888888 57899999999999999775
No 470
>PLN02876 acyl-CoA dehydrogenase
Probab=97.29 E-value=0.0014 Score=64.35 Aligned_cols=108 Identities=19% Similarity=0.199 Sum_probs=68.4
Q ss_pred eeeecCCcceEEEEEEEccCC--eEEEEEEeecCCCC---CCCHHHHHHHHhcC-CCce--eEeceeeeCCC--CcEEEE
Q 040812 62 LQVLGQGNGGTVFKVRHKQTL--ALYALKVMQCDRGT---PPNPQELNILRQTN-SPYI--VKCHQIFTKPS--GEVSIL 131 (300)
Q Consensus 62 ~~~lg~G~~g~V~~~~~~~~~--~~vaiK~~~~~~~~---~~~~~E~~~l~~l~-h~ni--v~~~~~~~~~~--~~~~lv 131 (300)
++.++.|.++.+|+......+ ..+++|........ ....+|..+|+.+. |.++ .+++.++.+.. +..|+|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence 577899999999998775432 46777775433211 23468999999985 6664 66777665431 468999
Q ss_pred EeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHh
Q 040812 132 MEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHS 171 (300)
Q Consensus 132 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~ 171 (300)
|||++|..+.+.. -..++......+..+++.+|..||.
T Consensus 123 ME~v~G~~~~~~~--~~~~~~~~r~~l~~~l~~~La~LH~ 160 (822)
T PLN02876 123 MEYLEGRIFVDPK--LPGVAPERRRAIYRATAKVLAALHS 160 (822)
T ss_pred EEecCCcccCCcc--CCCCCHHHHHHHHHHHHHHHHHHhC
Confidence 9999986443210 0123444555556666666655553
No 471
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.13 E-value=0.00018 Score=61.33 Aligned_cols=132 Identities=12% Similarity=0.164 Sum_probs=87.5
Q ss_pred ceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCC-----------------CC-------CCCHHHHHHHHhcCCC--
Q 040812 59 LEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDR-----------------GT-------PPNPQELNILRQTNSP-- 112 (300)
Q Consensus 59 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----------------~~-------~~~~~E~~~l~~l~h~-- 112 (300)
+.+++.||-|--+.||.+-+.+ |.+.++|+....+ .. -...+|...|+.+...
T Consensus 94 ~svGnqIGVGKESDIY~v~d~~-G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gf 172 (465)
T KOG2268|consen 94 ESVGNQIGVGKESDIYVVADEE-GNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGF 172 (465)
T ss_pred hhhccccccccccceEEEecCC-CCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCC
Confidence 4568899999999999999876 7788999753211 00 0113577788777532
Q ss_pred ceeEeceeeeCCCCcEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCCccccCCCCCceeecCCCCC
Q 040812 113 YIVKCHQIFTKPSGEVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRNIVHRDIKPANVLINEKMEH 192 (300)
Q Consensus 113 niv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i~H~Dlkp~Nill~~~~~~ 192 (300)
-+.+.+++ ...|+|||++.|-.|.+.-+- -+ +..+...+..-+--|-.+|+||+|..-=||+++++
T Consensus 173 pVPkpiD~-----~RH~Vvmelv~g~Pl~~v~~v---~d---~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~dd--- 238 (465)
T KOG2268|consen 173 PVPKPIDH-----NRHCVVMELVDGYPLRQVRHV---ED---PPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVKDD--- 238 (465)
T ss_pred CCCCcccc-----cceeeHHHhhcccceeeeeec---CC---hHHHHHHHHHHHHHHHHcCceecccchheeEEecC---
Confidence 24455553 267899999999887654421 12 23334444444556778999999999999999976
Q ss_pred Cccceeecccccccc
Q 040812 193 PCGYSCLYESGEARH 207 (300)
Q Consensus 193 ~~~~~~~~~~~~~~~ 207 (300)
+.....+||....
T Consensus 239 --~~i~vIDFPQmvS 251 (465)
T KOG2268|consen 239 --DKIVVIDFPQMVS 251 (465)
T ss_pred --CCEEEeechHhhc
Confidence 3344556665433
No 472
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.00 E-value=0.0039 Score=52.39 Aligned_cols=70 Identities=13% Similarity=0.170 Sum_probs=44.8
Q ss_pred eecCCcceEEEEEEEccCCeEEEEEEeecCCCC--CCCHHHHHHHHhcCCCce-eEeceeeeCCCCcEEEEEeccCCCCH
Q 040812 64 VLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--PPNPQELNILRQTNSPYI-VKCHQIFTKPSGEVSILMEYMDAGSL 140 (300)
Q Consensus 64 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~~lv~e~~~~~~L 140 (300)
.+..|-.+.+|+... +++.+++|........ -...+|..+++.+...++ .+++.. .+ -++||||++|..+
T Consensus 3 ~~~~G~tn~~y~~~~--~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~--~~---~~~v~e~i~G~~~ 75 (256)
T TIGR02721 3 TLSGGLTNRSWRIEH--PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILV--NE---HWLLVEWLEGEVI 75 (256)
T ss_pred cCCCcCcCCeEEEEe--CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEE--eC---CEEEEEeccCccc
Confidence 355677888998873 4667888976543222 134679999998865444 333333 22 2589999998665
No 473
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=96.96 E-value=0.0016 Score=53.58 Aligned_cols=79 Identities=23% Similarity=0.267 Sum_probs=53.5
Q ss_pred eeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHhcCCCc--eeEeceeeeC--CCCcEEEEEeccCC
Q 040812 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPY--IVKCHQIFTK--PSGEVSILMEYMDA 137 (300)
Q Consensus 62 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~--~~~~~~lv~e~~~~ 137 (300)
++.|+.|..+.||++.... + .+++|............+|..+++.+...+ +.+++..... ..+..+++|++++|
T Consensus 2 i~~l~~G~~n~~~~v~~~~-~-~~vlK~~~~~~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g 79 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD-G-RYVLKFYRPPDAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPG 79 (239)
T ss_dssp EEEEEESSSSEEEEEEETT-S-EEEEEEESSHHHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESS
T ss_pred CccCCCCCeeeEEEEEECC-c-EEEEEEeCCCCCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEecc
Confidence 4679999999999999876 3 788998654411223356888888775433 4555553222 12357999999999
Q ss_pred CCHHH
Q 040812 138 GSLEI 142 (300)
Q Consensus 138 ~~L~~ 142 (300)
..+..
T Consensus 80 ~~~~~ 84 (239)
T PF01636_consen 80 RPLDD 84 (239)
T ss_dssp EEHHH
T ss_pred ccccc
Confidence 88776
No 474
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=96.93 E-value=0.0022 Score=51.21 Aligned_cols=89 Identities=19% Similarity=0.094 Sum_probs=68.1
Q ss_pred HHHHHHHHhcCC-CceeEeceeeeCCCCcEEEEEeccCCCCHHHH---HHhCCCCCHHHHHHHHHHHHHHHHHhHh---C
Q 040812 100 PQELNILRQTNS-PYIVKCHQIFTKPSGEVSILMEYMDAGSLEIY---VKSRGRLSEDIICTISRQVLKGLFYMHS---R 172 (300)
Q Consensus 100 ~~E~~~l~~l~h-~niv~~~~~~~~~~~~~~lv~e~~~~~~L~~~---l~~~~~l~~~~~~~i~~qi~~~l~~lH~---~ 172 (300)
.+|.-+++.+++ +++++++|++. . ++|.||...+++... +.+....++..+..|+.+++..+.+|+. .
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG----~-~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~ 81 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCG----R-FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLG 81 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECC----C-EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 358888888877 68999999862 2 578999987655421 1111235899999999999999999986 3
Q ss_pred CccccCCCCCceeecCCCCCC
Q 040812 173 NIVHRDIKPANVLINEKMEHP 193 (300)
Q Consensus 173 ~i~H~Dlkp~Nill~~~~~~~ 193 (300)
.+.-+|++++|+-+++++..+
T Consensus 82 ~~~lcDv~~~nfgv~~~~~lk 102 (188)
T PF12260_consen 82 FFYLCDVSPDNFGVNDDGRLK 102 (188)
T ss_pred cEEEeecchHHeEEeCCCcEE
Confidence 477799999999999876543
No 475
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=96.89 E-value=0.0094 Score=51.56 Aligned_cols=80 Identities=15% Similarity=0.157 Sum_probs=49.0
Q ss_pred ceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHhcCCCc--eeEeceee-----eCCCCcEEEE
Q 040812 59 LEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPY--IVKCHQIF-----TKPSGEVSIL 131 (300)
Q Consensus 59 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~-----~~~~~~~~lv 131 (300)
...++.++.|.-..+|++... ++ .+++|+............|..++..+...+ +.+++... ....+..++|
T Consensus 24 ~~~i~~~~~G~~n~~y~v~t~-~~-~~vLK~~~~~~~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l 101 (307)
T TIGR00938 24 LLSLKGIAEGVENSNYLLTTD-VG-RYILTLYEKRVKAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACL 101 (307)
T ss_pred ceeccccCCccccceEEEEeC-CC-cEEEEEecCCCCHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEE
Confidence 345677888888899988753 34 577898755332333356777777774322 33443321 1123467899
Q ss_pred EeccCCCCH
Q 040812 132 MEYMDAGSL 140 (300)
Q Consensus 132 ~e~~~~~~L 140 (300)
++|++|..+
T Consensus 102 ~e~i~G~~~ 110 (307)
T TIGR00938 102 VEFLQGLSV 110 (307)
T ss_pred EEeCCCCCC
Confidence 999988543
No 476
>PRK05231 homoserine kinase; Provisional
Probab=96.79 E-value=0.026 Score=49.08 Aligned_cols=76 Identities=12% Similarity=0.179 Sum_probs=45.7
Q ss_pred eeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHhcCCCc--eeEecee-----eeCCCCcEEEEEe
Q 040812 61 KLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPY--IVKCHQI-----FTKPSGEVSILME 133 (300)
Q Consensus 61 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~-----~~~~~~~~~lv~e 133 (300)
-.+.|+.|....+|+..... | .+++|++. .........|+..+..+...+ +.+.+.. +..-.+..+++++
T Consensus 26 ~~~~l~~G~~n~~y~v~t~~-g-~~vLK~~~-~~~~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~ 102 (319)
T PRK05231 26 SLKGIAEGIENSNFFLTTTQ-G-EYVLTLFE-RLTAEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVT 102 (319)
T ss_pred ccchhccccccceEEEEeCC-C-cEEEEEec-cCChHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEE
Confidence 34667888888999987653 3 67889875 222233345667776664322 3333321 1111346789999
Q ss_pred ccCCCC
Q 040812 134 YMDAGS 139 (300)
Q Consensus 134 ~~~~~~ 139 (300)
+++|..
T Consensus 103 ~l~G~~ 108 (319)
T PRK05231 103 FLEGKW 108 (319)
T ss_pred ecCCCC
Confidence 999864
No 477
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=96.75 E-value=0.013 Score=50.25 Aligned_cols=77 Identities=16% Similarity=0.191 Sum_probs=49.6
Q ss_pred eeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHhcCCCc--eeEeceee-----eCCCCcEEEEEe
Q 040812 61 KLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPY--IVKCHQIF-----TKPSGEVSILME 133 (300)
Q Consensus 61 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~-----~~~~~~~~lv~e 133 (300)
-.+.|..|....+|+.... +..+++|+... ........|+.++..+.+.+ +.+++... ....+..++|++
T Consensus 18 ~i~~i~~G~~n~~y~v~~~--~~~~vLr~~~~-~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~ 94 (296)
T cd05153 18 SFEGISAGIENTNYFVTTD--SGRYVLTLFEK-VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVE 94 (296)
T ss_pred heecccCccccceEEEEeC--CCcEEEEEcCC-CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEE
Confidence 3567888888899998654 34688898764 22334456888888875433 34443321 111235789999
Q ss_pred ccCCCCH
Q 040812 134 YMDAGSL 140 (300)
Q Consensus 134 ~~~~~~L 140 (300)
+++|..+
T Consensus 95 ~i~G~~~ 101 (296)
T cd05153 95 FLAGEHL 101 (296)
T ss_pred eCCCCCC
Confidence 9998664
No 478
>PLN02756 S-methyl-5-thioribose kinase
Probab=96.71 E-value=0.031 Score=49.92 Aligned_cols=72 Identities=18% Similarity=0.167 Sum_probs=48.3
Q ss_pred eeeeecCCcceEEEEEEEccCCeEEEEEEeecCC---------CCCCCHHHHHHHHhcC---CCceeEeceeeeCCCCcE
Q 040812 61 KLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDR---------GTPPNPQELNILRQTN---SPYIVKCHQIFTKPSGEV 128 (300)
Q Consensus 61 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~ 128 (300)
..+.||-|....||+..+. +..++||.-.... .......|...|+.+. ...+.+++.+..+ ..
T Consensus 36 ~~~eiggGn~N~VyrV~~~--~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ded---~~ 110 (418)
T PLN02756 36 KIKEVGDGNLNFVYIVVSS--SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDRT---MA 110 (418)
T ss_pred eEEEcCCCceeeEEEEEcC--CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECCC---CC
Confidence 3678999999999998874 3468899754211 1112244777776553 2467778877542 45
Q ss_pred EEEEeccCC
Q 040812 129 SILMEYMDA 137 (300)
Q Consensus 129 ~lv~e~~~~ 137 (300)
+++||++++
T Consensus 111 vlvME~L~~ 119 (418)
T PLN02756 111 LIGMRYLEP 119 (418)
T ss_pred EEEEeecCC
Confidence 789999977
No 479
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=96.52 E-value=0.031 Score=49.09 Aligned_cols=71 Identities=17% Similarity=0.138 Sum_probs=45.4
Q ss_pred eecCCcceEEEEEEEccCCeEEEEEEeecCC-------C--CCCCHHHHHHHHhcCC--C-ceeEeceeeeCCCCcEEEE
Q 040812 64 VLGQGNGGTVFKVRHKQTLALYALKVMQCDR-------G--TPPNPQELNILRQTNS--P-YIVKCHQIFTKPSGEVSIL 131 (300)
Q Consensus 64 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~--~~~~~~E~~~l~~l~h--~-niv~~~~~~~~~~~~~~lv 131 (300)
.||.|....||++.....++.++||.-.... . .....-|...|+...- | .+++++.+ . .....+|
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~-D--~e~~~~v 78 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHF-D--TEMAVTV 78 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEE-c--cccceeh
Confidence 5799999999999987545789999753211 0 1112347777766532 4 45555553 3 2256799
Q ss_pred EeccCC
Q 040812 132 MEYMDA 137 (300)
Q Consensus 132 ~e~~~~ 137 (300)
||+++.
T Consensus 79 MEdL~~ 84 (370)
T TIGR01767 79 MEDLSH 84 (370)
T ss_pred HhhCcc
Confidence 999854
No 480
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=95.88 E-value=0.046 Score=46.72 Aligned_cols=75 Identities=15% Similarity=0.211 Sum_probs=46.4
Q ss_pred eeeeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHhcC---CCceeEeceeeeCCCCcEEEEEeccC
Q 040812 60 EKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTN---SPYIVKCHQIFTKPSGEVSILMEYMD 136 (300)
Q Consensus 60 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~~lv~e~~~ 136 (300)
+..+.++-|.-..+|+.. .+++.+-+|+-. ......+..|..-|+.|. --.+.+++++..... ..++||||++
T Consensus 20 ~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~-~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~-~~fLlle~l~ 95 (288)
T PF03881_consen 20 TSIEPVSGGDINEAYRLD--TDGGSYFVKVNS-ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDD-DAFLLLEFLE 95 (288)
T ss_dssp -EEEEE--SSSSEEEEEE--TTS-EEEEEEEE-GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SS-CCEEEEE---
T ss_pred eeeEecCCCChhheEEEE--CCCccEEEEecC-hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecC-CceEEEEeec
Confidence 456789999999999887 456788899866 334445677888888773 345777888766544 5699999998
Q ss_pred CC
Q 040812 137 AG 138 (300)
Q Consensus 137 ~~ 138 (300)
.+
T Consensus 96 ~~ 97 (288)
T PF03881_consen 96 MG 97 (288)
T ss_dssp --
T ss_pred CC
Confidence 76
No 481
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=95.65 E-value=0.099 Score=43.12 Aligned_cols=99 Identities=18% Similarity=0.187 Sum_probs=61.5
Q ss_pred eeeecCCcceEEEEEEEcc-CCeEEEEEEeecCCCC-CCCHHHHHHHHhcCCCce-eEeceeeeCCCCcEEEEEeccCCC
Q 040812 62 LQVLGQGNGGTVFKVRHKQ-TLALYALKVMQCDRGT-PPNPQELNILRQTNSPYI-VKCHQIFTKPSGEVSILMEYMDAG 138 (300)
Q Consensus 62 ~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~-~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~~lv~e~~~~~ 138 (300)
++.|..|-...+|++.... .++.|++|+....... -...+|+.+++.+...++ +++++.. .. .+||||++|.
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl~P~v~~~~--~~---~~l~e~i~G~ 77 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGLAPKLYATF--QN---GLIYEFIPGR 77 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhCCCCCeEEEEe--CC---cEEEEeeCCC
Confidence 4668888888999997653 3467889976543221 122468999988854443 3444432 22 3799999997
Q ss_pred CHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCC
Q 040812 139 SLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRN 173 (300)
Q Consensus 139 ~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ 173 (300)
++...... ...++.+++..|..||...
T Consensus 78 ~l~~~~~~--------~~~~~~~la~~l~~lH~~~ 104 (235)
T cd05157 78 TLEPEDLR--------NPKIYRLIARELAKLHSIK 104 (235)
T ss_pred cCCHHHcc--------ChHHHHHHHHHHHHHhccc
Confidence 66432110 1235667777777788653
No 482
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=94.97 E-value=0.09 Score=44.75 Aligned_cols=45 Identities=11% Similarity=0.042 Sum_probs=27.4
Q ss_pred ecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHhcC
Q 040812 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTN 110 (300)
Q Consensus 65 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~ 110 (300)
.++|-...|+...+. .|+.+++|.-+.........+|..+|..+.
T Consensus 19 ~~~g~~~~v~~i~~~-~g~~~VlR~p~~~~~~~~l~rE~~vL~~L~ 63 (276)
T cd05152 19 NESGLDFQVVFAKDT-DGVPWVLRIPRRPDVSERAAAEKRVLALVR 63 (276)
T ss_pred cCCcceeEEEEEEcC-CCCeEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 344544556655332 367888888654333334567999988875
No 483
>PLN02236 choline kinase
Probab=94.76 E-value=0.4 Score=42.20 Aligned_cols=75 Identities=12% Similarity=0.096 Sum_probs=48.1
Q ss_pred eeeecCCcceEEEEEEEcc----CCeEEEEEEeecCCCC-CCCHHHHHHHHhcCCCcee-EeceeeeCCCCcEEEEEecc
Q 040812 62 LQVLGQGNGGTVFKVRHKQ----TLALYALKVMQCDRGT-PPNPQELNILRQTNSPYIV-KCHQIFTKPSGEVSILMEYM 135 (300)
Q Consensus 62 ~~~lg~G~~g~V~~~~~~~----~~~~vaiK~~~~~~~~-~~~~~E~~~l~~l~h~niv-~~~~~~~~~~~~~~lv~e~~ 135 (300)
++.+-.|-...+|++.... .++.|++|+....... -...+|..+++.+..-++. ++++.+. ++ .|.+|+
T Consensus 41 i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~~gl~P~~~~~~~--~g---~v~efi 115 (344)
T PLN02236 41 VIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSRHGQGPRLLGRFP--NG---RVEEFI 115 (344)
T ss_pred EEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHHcCCCCceEEEEC--Cc---eEEEee
Confidence 4556668888999987542 2468899987643311 1225699999888654443 4555542 33 579999
Q ss_pred CCCCHH
Q 040812 136 DAGSLE 141 (300)
Q Consensus 136 ~~~~L~ 141 (300)
++.+|.
T Consensus 116 ~g~~l~ 121 (344)
T PLN02236 116 HARTLS 121 (344)
T ss_pred CCCCCC
Confidence 876663
No 484
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=94.09 E-value=0.93 Score=40.70 Aligned_cols=81 Identities=16% Similarity=0.084 Sum_probs=53.4
Q ss_pred eeeecCCcceEEEEEEEccCCeEEEEEEeecCC----C-----CCCCHHHHHHHHhcC---CCceeEeceeeeCCCCcEE
Q 040812 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDR----G-----TPPNPQELNILRQTN---SPYIVKCHQIFTKPSGEVS 129 (300)
Q Consensus 62 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~-----~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~~ 129 (300)
.+.||.|.+..||++.....++.++||.-.... . ......|...|+.+. -..+++++.+ ++ ...+
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~-~~~~ 107 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DE-ELAV 107 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CC-CCCE
Confidence 467999999999999997654689999853211 0 111245777777753 2456777765 22 3568
Q ss_pred EEEeccCCCC-HHHHHH
Q 040812 130 ILMEYMDAGS-LEIYVK 145 (300)
Q Consensus 130 lv~e~~~~~~-L~~~l~ 145 (300)
+|||++++.. +.+.+.
T Consensus 108 lVME~L~~~~~lr~~Ll 124 (401)
T PRK09550 108 TVMEDLSDHKILRKGLI 124 (401)
T ss_pred EEEecCCCccHHHHHHh
Confidence 9999998744 444443
No 485
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=94.03 E-value=0.21 Score=44.44 Aligned_cols=62 Identities=26% Similarity=0.402 Sum_probs=45.2
Q ss_pred cEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh-HhCCccccCCCCCceeecCC
Q 040812 127 EVSILMEYMDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYM-HSRNIVHRDIKPANVLINEK 189 (300)
Q Consensus 127 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~l-H~~~i~H~Dlkp~Nill~~~ 189 (300)
...+|-+|..|-++..+++.. ..++...+.++.-...|+--+ --.+++|.|+.|.||++.-+
T Consensus 319 ~~vl~E~~~~Gl~v~~~v~~~-~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~ 381 (565)
T KOG1236|consen 319 DLVLVETYERGLSVLRFVKWK-SQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFN 381 (565)
T ss_pred cceeeeeccccccHHhhhhcc-cChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEec
Confidence 345777889998998888754 345556666666666666544 35789999999999999644
No 486
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=94.01 E-value=0.021 Score=58.35 Aligned_cols=136 Identities=16% Similarity=0.014 Sum_probs=88.2
Q ss_pred HHHHHHhcCCCceeEeceeeeCC-CCcEEEEEeccCCCCHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHhHhC-C--
Q 040812 102 ELNILRQTNSPYIVKCHQIFTKP-SGEVSILMEYMDAGSLEIYVKSRG----RLSEDIICTISRQVLKGLFYMHSR-N-- 173 (300)
Q Consensus 102 E~~~l~~l~h~niv~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~----~l~~~~~~~i~~qi~~~l~~lH~~-~-- 173 (300)
|...++...|+++.....-.... ....|.+++|+.+|.+.+.+-++- .+...-+....++.+.+..-+|+. +
T Consensus 1279 e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg 1358 (2724)
T KOG1826|consen 1279 ERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLG 1358 (2724)
T ss_pred hhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCC
Confidence 44455667899888766654332 234789999999999999986532 233344444444447777777754 2
Q ss_pred --ccccCCCCCceeecCCCCCCccceeecc--ccc--------------cccccCCCCCCchhhHHHHHHHHHHHHhCCC
Q 040812 174 --IVHRDIKPANVLINEKMEHPCGYSCLYE--SGE--------------ARHRKHGGYNGFAADIWSFGVTMMELYMGYY 235 (300)
Q Consensus 174 --i~H~Dlkp~Nill~~~~~~~~~~~~~~~--~~~--------------~~~~~~~~~~~~~~DiwSlG~il~elltg~~ 235 (300)
.+|++||+-|.+|..+.....|...+-. .|. .+.....-.++.++|+|+.|+-+|+...|..
T Consensus 1359 ~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~~n~ 1438 (2724)
T KOG1826|consen 1359 NTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSDGNA 1438 (2724)
T ss_pred ccchhhhhhhhccceecCCcccccccccccccCchHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcccH
Confidence 6899999999999887755444333322 110 0001111224556999999999999998887
Q ss_pred CC
Q 040812 236 PF 237 (300)
Q Consensus 236 pf 237 (300)
+|
T Consensus 1439 ~f 1440 (2724)
T KOG1826|consen 1439 YF 1440 (2724)
T ss_pred HH
Confidence 77
No 487
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=93.66 E-value=0.81 Score=39.96 Aligned_cols=75 Identities=20% Similarity=0.250 Sum_probs=45.8
Q ss_pred eeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHhcCCCce------eEe----ceeeeCCCCcEEEEE
Q 040812 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYI------VKC----HQIFTKPSGEVSILM 132 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~h~ni------v~~----~~~~~~~~~~~~lv~ 132 (300)
..|.+ .-..+|+....+ |+. ++|+............|+..|..+.-.+| ..+ +...... .+.+-|+
T Consensus 32 ~~l~s-~eN~~f~~~~~~-g~~-iLki~~~~~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~-~r~a~lf 107 (331)
T COG2334 32 RGLNS-EENSNFRVQTED-GRY-ILKIYRPGWTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGG-PRPAALF 107 (331)
T ss_pred ccccc-ccCceEEEEecC-CCe-EEEEecCCCCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCC-ceeEEEE
Confidence 44555 556789888775 334 89998776333344567888877632221 111 1122222 2788999
Q ss_pred eccCCCCHH
Q 040812 133 EYMDAGSLE 141 (300)
Q Consensus 133 e~~~~~~L~ 141 (300)
+|++|..+.
T Consensus 108 ~~l~G~~~~ 116 (331)
T COG2334 108 EYLPGRPLE 116 (331)
T ss_pred EecCCcCcC
Confidence 999997776
No 488
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=93.64 E-value=0.38 Score=41.33 Aligned_cols=98 Identities=17% Similarity=0.173 Sum_probs=62.7
Q ss_pred eeecCCcceEEEEEEEcc------CCeEEEEEEeecCCCC-CCCHHHHHHHHhcCCCcee-EeceeeeCCCCcEEEEEec
Q 040812 63 QVLGQGNGGTVFKVRHKQ------TLALYALKVMQCDRGT-PPNPQELNILRQTNSPYIV-KCHQIFTKPSGEVSILMEY 134 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~------~~~~vaiK~~~~~~~~-~~~~~E~~~l~~l~h~niv-~~~~~~~~~~~~~~lv~e~ 134 (300)
+.+..|-...+|++.... +++.+++|+....... ....+|..++..+...++. ++++.+. . .+|+||
T Consensus 4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~--~---~~v~e~ 78 (302)
T cd05156 4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERNLGPKLYGIFP--N---GRIEEF 78 (302)
T ss_pred EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCCCCCceEEEeC--C---Cchhhe
Confidence 556667777889887643 2578899997654322 2346798888888654433 4444432 2 268999
Q ss_pred cCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHhCC
Q 040812 135 MDAGSLEIYVKSRGRLSEDIICTISRQVLKGLFYMHSRN 173 (300)
Q Consensus 135 ~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ 173 (300)
++|..+...... + ..++.+++..|..||+..
T Consensus 79 i~G~~l~~~~~~----~----~~~~~~ia~~L~~lH~~~ 109 (302)
T cd05156 79 IPSRTLTTEELR----D----PDISAEIARRMAKLHSIV 109 (302)
T ss_pred eCCCcCCHhHcC----C----cHHHHHHHHHHHHhhCCC
Confidence 998776542111 1 235678888888888754
No 489
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=93.52 E-value=0.0086 Score=53.97 Aligned_cols=69 Identities=23% Similarity=0.319 Sum_probs=55.0
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeecCC---CCCCCHHHHHHHHhcCCCceeEeceeeeC
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQCDR---GTPPNPQELNILRQTNSPYIVKCHQIFTK 123 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 123 (300)
..++++....+|.|+||+|+.+..+.++..+|||.+.... ......+|...+..+.|++++++...|..
T Consensus 47 ~a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e~s~~rvl~~~~s~a~feh~g~~~~~ha~~~ 118 (516)
T KOG1033|consen 47 EANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNREESRSRVLREVSSLAEFEHPGIKRYFHAWYE 118 (516)
T ss_pred hhccccccccccccCccccCCccccccchhhHHHHhcccchhhhhhhhhccccchhhhcccchhhheeceec
Confidence 3567889999999999999999999888889999875332 22334568888899999999998777654
No 490
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.45 E-value=0.43 Score=39.21 Aligned_cols=73 Identities=16% Similarity=0.225 Sum_probs=41.4
Q ss_pred ecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHhc---CCCceeEeceeeeCCCCcEEEEEeccCCCCHH
Q 040812 65 LGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQT---NSPYIVKCHQIFTKPSGEVSILMEYMDAGSLE 141 (300)
Q Consensus 65 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~~lv~e~~~~~~L~ 141 (300)
+.-|---..|...+- ...+-+|+-.. .....+..|+.-|..+ +.-.+.+++.+-.. .++.|+||||++-+.+.
T Consensus 24 v~gG~inea~~v~dg--~~~~FvK~n~~-~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~-~~~sylVle~L~~~~~d 99 (286)
T COG3001 24 VSGGDINEAWRLRDG--TDPFFVKCNQR-EQLSMFTAEADGLELLARSNTITVPKVIAVGAS-RDHSYLVLEYLPTGPLD 99 (286)
T ss_pred cCCccccceeEeecC--CcceEEEecch-hhHHHHHHHHHHHHHHHhcCCccccceEEecCC-CCeeEEEEeeccCCCCC
Confidence 333333344444332 34677786432 2223445566655554 44456677776544 45899999999876553
No 491
>PRK06148 hypothetical protein; Provisional
Probab=93.37 E-value=3 Score=42.36 Aligned_cols=79 Identities=15% Similarity=0.208 Sum_probs=44.7
Q ss_pred eeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHhcC--C-----CceeEec-----eeeeCCCC--c
Q 040812 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTN--S-----PYIVKCH-----QIFTKPSG--E 127 (300)
Q Consensus 62 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~--h-----~niv~~~-----~~~~~~~~--~ 127 (300)
++.|+. ..-.+|+.... +++.+++|+............|...|..+. + |.+++-. .....+.+ .
T Consensus 30 ~~~L~s-~~d~nf~v~~~-~g~~yVLKi~~~~~~~~~~~~q~~~L~hL~~~~~glpvP~~i~t~~G~~~~~v~~~~G~~~ 107 (1013)
T PRK06148 30 ATPLDG-ERDLNFRLTTD-DGADYILKIVNPSEPRVESDFQTAALDHLAAVAPDLPVPRLIPSLSGASLASAQDPDGEPR 107 (1013)
T ss_pred EeecCC-cCCceEEEEeC-CCCeEEEEEcCCccchhHHHHHHHHHHHHHhhCCCCCcCeeeecCCCCeEEEeecCCCceE
Confidence 356754 56788888754 466789999876433323334555665552 1 2233211 11122222 4
Q ss_pred EEEEEeccCCCCHHH
Q 040812 128 VSILMEYMDAGSLEI 142 (300)
Q Consensus 128 ~~lv~e~~~~~~L~~ 142 (300)
.+-+++|++|..+.+
T Consensus 108 ~vrLl~~l~G~~l~~ 122 (1013)
T PRK06148 108 LLRLLSWLPGTPLAE 122 (1013)
T ss_pred EEEEEeccCCCcHHh
Confidence 677899999977654
No 492
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=93.33 E-value=1 Score=39.47 Aligned_cols=73 Identities=15% Similarity=0.255 Sum_probs=46.1
Q ss_pred eeecCCcceEEEEEEEccC---CeEEEEEEeecCCCC-CCCHHHHHHHHhcCCCcee-EeceeeeCCCCcEEEEEeccCC
Q 040812 63 QVLGQGNGGTVFKVRHKQT---LALYALKVMQCDRGT-PPNPQELNILRQTNSPYIV-KCHQIFTKPSGEVSILMEYMDA 137 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~~~-~~~~~E~~~l~~l~h~niv-~~~~~~~~~~~~~~lv~e~~~~ 137 (300)
+.|..|=...+|++..... +..|++|+....... -...+|..+++.+..-++- ++++++ .+| +|.+|++|
T Consensus 20 ~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~IdR~~E~~il~~l~~~gl~P~~l~~~--~~G---~i~~fi~g 94 (330)
T PLN02421 20 ERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVIDRERELQAIKYLSAAGFGAKLLGVF--GNG---MIQSFINA 94 (330)
T ss_pred EEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCeEechHHHHHHHHHHHhcCCCCceeEEe--CCc---EeehhhcC
Confidence 4555577788898875432 347889987543321 1225799999988765553 455554 233 58899877
Q ss_pred CCH
Q 040812 138 GSL 140 (300)
Q Consensus 138 ~~L 140 (300)
..|
T Consensus 95 ~~l 97 (330)
T PLN02421 95 RTL 97 (330)
T ss_pred CCC
Confidence 655
No 493
>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []. Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process
Probab=92.38 E-value=0.62 Score=39.04 Aligned_cols=79 Identities=19% Similarity=0.105 Sum_probs=55.2
Q ss_pred eeeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHhcCCCceeEeceeeeCCCCcEEEEEecc-CCCCH
Q 040812 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQTNSPYIVKCHQIFTKPSGEVSILMEYM-DAGSL 140 (300)
Q Consensus 62 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~lv~e~~-~~~~L 140 (300)
...+..|..+.|+.++... |..+++|+................|+..+-.+.|++++.- .. .-.|++|.+ ++.+|
T Consensus 7 ~~~~~~g~~s~V~pv~~~d-G~~avLKl~~p~~~~~~E~~g~~~L~~w~G~GaVrll~~d--~~-~~AlLLErl~~g~~L 82 (253)
T PF04655_consen 7 DGPPAHGSSSLVVPVRRAD-GTPAVLKLAPPHAEAEHEARGEAALRWWNGRGAVRLLAAD--PE-RGALLLERLDPGRSL 82 (253)
T ss_pred CCCCCCCcceEEEEEEcCC-CCeEEEEecCCcccchhhhhHHhHhheeCCCCceeeeccc--cc-cchhhhhhccCCCch
Confidence 3457789999999998654 7899999976544332222233668888888899999863 22 456899998 45577
Q ss_pred HHHH
Q 040812 141 EIYV 144 (300)
Q Consensus 141 ~~~l 144 (300)
.+..
T Consensus 83 ~~~~ 86 (253)
T PF04655_consen 83 ASLP 86 (253)
T ss_pred hhcc
Confidence 6554
No 494
>PTZ00384 choline kinase; Provisional
Probab=91.60 E-value=2.3 Score=38.09 Aligned_cols=75 Identities=12% Similarity=0.118 Sum_probs=45.0
Q ss_pred eeeecCCcceEEEEEEEccCC-eE-----EEEEEeecCC-CCCCCHHHHHHHHhcCCCce-eEeceeeeCCCCcEEEEEe
Q 040812 62 LQVLGQGNGGTVFKVRHKQTL-AL-----YALKVMQCDR-GTPPNPQELNILRQTNSPYI-VKCHQIFTKPSGEVSILME 133 (300)
Q Consensus 62 ~~~lg~G~~g~V~~~~~~~~~-~~-----vaiK~~~~~~-~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~~lv~e 133 (300)
++.|..|-...+|++...... .. |.++...... ..-...+|+.+++.+...++ .++++.+. + ++|.|
T Consensus 55 i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~IdR~~E~~i~~~Ls~~glgP~l~~~f~--~---g~l~e 129 (383)
T PTZ00384 55 IKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVIDNDLQYNIAKLLGDNNFGPKIIGRFG--D---FTIQE 129 (383)
T ss_pred EEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEeccHHHHHHHHHHHhCCCCCeEEEecC--C---EEEEE
Confidence 456666888999999754321 22 4444321111 11122569999999876554 45666542 2 58999
Q ss_pred ccCCCCHH
Q 040812 134 YMDAGSLE 141 (300)
Q Consensus 134 ~~~~~~L~ 141 (300)
|++|..|.
T Consensus 130 fIeGr~l~ 137 (383)
T PTZ00384 130 WVEGNTMG 137 (383)
T ss_pred EeccccCC
Confidence 99987663
No 495
>PHA03111 Ser/Thr kinase; Provisional
Probab=90.48 E-value=0.48 Score=41.07 Aligned_cols=63 Identities=21% Similarity=0.179 Sum_probs=38.7
Q ss_pred EEEEEeccCC--CCHHH-HHHhCCC-CCHHHHHHHHHHHHHHHHHhH----hCCccccCCCCCceeecCCC
Q 040812 128 VSILMEYMDA--GSLEI-YVKSRGR-LSEDIICTISRQVLKGLFYMH----SRNIVHRDIKPANVLINEKM 190 (300)
Q Consensus 128 ~~lv~e~~~~--~~L~~-~l~~~~~-l~~~~~~~i~~qi~~~l~~lH----~~~i~H~Dlkp~Nill~~~~ 190 (300)
..+|+.++.+ ..+.. ...+.|- --...++.++.||+.-.-.+- ..+.+|-||||+|||+-+..
T Consensus 250 nIIIfPLArcSadkv~~~~~~e~GF~s~~~YikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~ 320 (444)
T PHA03111 250 NIIIFPLARCSADKVTEENAAELGFKSLVEYIKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFDSD 320 (444)
T ss_pred cEEEEehhhcccccCCHHHHHHcCCccHHHHHHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEecCC
Confidence 3477776533 22222 1122222 234678889999887553442 23689999999999997653
No 496
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=88.80 E-value=0.1 Score=38.23 Aligned_cols=44 Identities=25% Similarity=0.225 Sum_probs=31.9
Q ss_pred eeecCCcceEEEEEEEccCCeEEEEEEeecCCCCCCCHHHHHHHHh
Q 040812 63 QVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGTPPNPQELNILRQ 108 (300)
Q Consensus 63 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~ 108 (300)
+.||+|+.|.||+|+.+. |+.||||+.+... .......+.+|+.
T Consensus 17 ~PlasASiaQVh~a~l~~-g~~VaVKV~rP~i-~~~i~~Dl~~l~~ 60 (119)
T PF03109_consen 17 EPLASASIAQVHRARLKD-GEEVAVKVQRPGI-EEQIEADLRILRR 60 (119)
T ss_pred chhhheehhhheeeeecc-cchhhhhhcchHH-HHHHHHHHHHHHH
Confidence 679999999999999876 8999999975432 1222335555554
No 497
>PRK11768 serine/threonine protein kinase; Provisional
Probab=88.63 E-value=4.7 Score=35.18 Aligned_cols=69 Identities=10% Similarity=0.010 Sum_probs=38.3
Q ss_pred cceEEEEEEEccCCeEEEEEEeecCCC-CCCCHHHHHHHHhcCCCc--eeEec---e--eeeCCCCcEEEEEeccCCCC
Q 040812 69 NGGTVFKVRHKQTLALYALKVMQCDRG-TPPNPQELNILRQTNSPY--IVKCH---Q--IFTKPSGEVSILMEYMDAGS 139 (300)
Q Consensus 69 ~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l~h~n--iv~~~---~--~~~~~~~~~~lv~e~~~~~~ 139 (300)
.-..||+....+ +..+++|+...... ......|+..+..+.... ++... + .... ++..+.|+++++|..
T Consensus 37 ~eN~vy~v~~~~-~~~~vlKv~r~~~~~~~~i~~E~~~l~~L~~~gipv~~p~~~~G~~~~~~-~g~~~~l~~~~~G~~ 113 (325)
T PRK11768 37 YENRVYQFGDED-GRRVVAKFYRPERWSDAQILEEHAFALELAEAEIPVVAPLAFNGQTLHEH-QGFRFALFPRRGGRA 113 (325)
T ss_pred ccceEEEEecCC-CCEEEEEEcCcccCCHHHHHHHHHHHHHHHHCCCCCCCCccCCCCEEEEE-CCEEEEEEeeeCCCC
Confidence 345789887643 55788998754331 222245777776663221 22221 1 1111 346788999998754
No 498
>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly. ; GO: 0004672 protein kinase activity, 0005524 ATP binding
Probab=88.11 E-value=0.56 Score=40.87 Aligned_cols=40 Identities=28% Similarity=0.342 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHHHHHh---H-hCCccccCCCCCceeecCCCC
Q 040812 152 EDIICTISRQVLKGLFYM---H-SRNIVHRDIKPANVLINEKME 191 (300)
Q Consensus 152 ~~~~~~i~~qi~~~l~~l---H-~~~i~H~Dlkp~Nill~~~~~ 191 (300)
...++.++.||+.-.--+ - ..+.+|-||||+|||+-+...
T Consensus 274 ~~YvkfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~~ 317 (434)
T PF05445_consen 274 VEYVKFIFLQIALLYIKIYELPCCTNFLHVDLKPDNILIFDSKE 317 (434)
T ss_pred HHHHHHHHHHHHHHHeeeecCCCcceeeecccCcCcEEEecCCC
Confidence 456788888887644222 2 346899999999999976533
No 499
>PRK12396 5-methylribose kinase; Reviewed
Probab=88.04 E-value=1.8 Score=38.71 Aligned_cols=102 Identities=16% Similarity=0.151 Sum_probs=60.9
Q ss_pred eeeecCCcceEEEEEEEccCCeEEEEEEeecCCCC--------CCCHHHHHHHHhcC--CC-ceeEeceeeeCCCCcEEE
Q 040812 62 LQVLGQGNGGTVFKVRHKQTLALYALKVMQCDRGT--------PPNPQELNILRQTN--SP-YIVKCHQIFTKPSGEVSI 130 (300)
Q Consensus 62 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--------~~~~~E~~~l~~l~--h~-niv~~~~~~~~~~~~~~l 130 (300)
.+.||-|.-..||++.+...++.|+||.-...... ....-|...|+... -| .+++++.+ . + ....+
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~-D-~-e~~~~ 110 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF-D-S-VMNCC 110 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE-C-c-HHhhH
Confidence 57899999999999998544567899975321111 11234888887653 24 45556554 2 2 25679
Q ss_pred EEeccCC-CCHHHHHHhCCCCCHHHHHHHHHHHHHHHH
Q 040812 131 LMEYMDA-GSLEIYVKSRGRLSEDIICTISRQVLKGLF 167 (300)
Q Consensus 131 v~e~~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~~l~ 167 (300)
|||+++. ..|.+.+..+..++ ..+..+..-++..+.
T Consensus 111 vMEdL~~~~ilR~~Li~G~~~p-~~A~~ig~fla~tlf 147 (409)
T PRK12396 111 VMEDLSDHTILRTALINHEIFP-RLADDLTTFLVNTLL 147 (409)
T ss_pred HHHhCcccHHHHHHHHcCCcCh-hHHHHHHHHHHHHHh
Confidence 9999964 34555555544343 344444444444433
No 500
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=80.41 E-value=7.4 Score=33.85 Aligned_cols=84 Identities=12% Similarity=0.175 Sum_probs=48.5
Q ss_pred CCCcceeeeeecCCcceEEEEEEEccCCeEEEEEEeec-CCCC---CCCHHHHHHHHhcCCC--ceeEeceeeeCCC-Cc
Q 040812 55 GLSQLEKLQVLGQGNGGTVFKVRHKQTLALYALKVMQC-DRGT---PPNPQELNILRQTNSP--YIVKCHQIFTKPS-GE 127 (300)
Q Consensus 55 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~---~~~~~E~~~l~~l~h~--niv~~~~~~~~~~-~~ 127 (300)
+.....+++.+-.|....+|..... ++.+++. ... .... ....+|..+++.+.-- -+...++++..+. +.
T Consensus 23 ~~~~~~~v~~~~~G~sn~t~~~~~~--~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~ 99 (321)
T COG3173 23 GYAGLLIVEEISGGWSNDTFRLGDT--GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGT 99 (321)
T ss_pred CcCCCceeeeccCCcccceEEEecC--CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCC
Confidence 3344455566655555555666554 6677887 221 1111 2235688888876532 2334555555544 57
Q ss_pred EEEEEeccCCCCHH
Q 040812 128 VSILMEYMDAGSLE 141 (300)
Q Consensus 128 ~~lv~e~~~~~~L~ 141 (300)
.|.||++++|..+.
T Consensus 100 pf~v~~~veGe~~~ 113 (321)
T COG3173 100 PFYVMEWVEGEVVW 113 (321)
T ss_pred ceEEEEEecceecc
Confidence 89999999986443
Done!