BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040813
(401 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1PHP|A Chain A, Structure Of The Adp Complex Of The 3-Phosphoglycerate
Kinase From Bacillus Stearothermophilus At 1.65
Angstroms
Length = 394
Score = 469 bits (1206), Expect = e-132, Method: Compositional matrix adjust.
Identities = 242/392 (61%), Positives = 300/392 (76%), Gaps = 5/392 (1%)
Query: 10 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPK 69
+++ D++GKRVF RVD NVP++ ITDD R+RAA+PTI+YL+ HGAKVIL+SHLGRPK
Sbjct: 6 IRDVDVRGKRVFCRVDFNVPMEQGA-ITDDTRIRAALPTIRYLIEHGAKVILASHLGRPK 64
Query: 70 G-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEE 128
G V + L + RL ELL V N+ +G+EV+ V + EG VLLLENVRF+ EE
Sbjct: 65 GKVVEELRLDAVAKRLGELLERPVAKTNEAVGDEVKAAVDRLNEGDVLLLENVRFYPGEE 124
Query: 129 KNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVS 188
KNDPE AK A LADLYVNDAFG+AHRAHASTEG+A +L P+VAGFLM+KEL+ L A+S
Sbjct: 125 KNDPELAKAFAELADLYVNDAFGAAHRAHASTEGIAHYL-PAVAGFLMEKELEVLGKALS 183
Query: 189 NPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKL 248
NP +PF AI+GG+KV KIGVI++LLEKVD L++GGG+ +TF KA GH VG SL+EEDK+
Sbjct: 184 NPDRPFTAIIGGAKVKDKIGVIDNLLEKVDNLIIGGGLAYTFVKALGHDVGKSLLEEDKI 243
Query: 249 DLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSF 308
+LA S MEKAK KGV +P DVV+AD+FA DAN+KVVP AIP W LD+GP + +
Sbjct: 244 ELAKSFMEKAKEKGVRFYMPVDVVVADRFANDANTKVVPIDAIPADWSALDIGPKTRELY 303
Query: 309 SEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVG 368
+ + +K ++WNGPMGVFE D FA GT+AIA+ LAE ++IGGGDS AAVEK G
Sbjct: 304 RDVIRESKLVVWNGPMGVFEMDAFAHGTKAIAEALAEAL--DTYSVIGGGDSAAAVEKFG 361
Query: 369 LADKMSHISTGGGASLELLEGKTLPGVLALDD 400
LADKM HISTGGGASLE +EGK LPGV+AL+D
Sbjct: 362 LADKMDHISTGGGASLEFMEGKQLPGVVALED 393
>pdb|1VPE|A Chain A, Crystallographic Analysis Of Phosphoglycerate Kinase From
The Hyperthermophilic Bacterium Thermotoga Maritima
Length = 398
Score = 464 bits (1193), Expect = e-131, Method: Compositional matrix adjust.
Identities = 234/391 (59%), Positives = 292/391 (74%), Gaps = 4/391 (1%)
Query: 10 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPK 69
+++ DLKGKRV +RVD NVP+ D + + DD R+RAA+PTIKY + GAKVIL SHLGRPK
Sbjct: 5 IRDVDLKGKRVIMRVDFNVPVKDGV-VQDDTRIRAALPTIKYALEQGAKVILLSHLGRPK 63
Query: 70 G-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEE 128
G +P++SL P+ RLSELLG EVK +G+EV+K V E+ EG VLLLEN RFH E
Sbjct: 64 GEPSPEFSLAPVAKRLSELLGKEVKFVPAVVGDEVKKAVEELKEGEVLLLENTRFHPGET 123
Query: 129 KNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVS 188
KNDPE AK ASLAD++VNDAFG+AHRAHAS G+A+F+ PSVAGFLM+KE+ +L
Sbjct: 124 KNDPELAKFWASLADIHVNDAFGTAHRAHASNVGIAQFI-PSVAGFLMEKEIKFLSKVTY 182
Query: 189 NPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKL 248
NP+KP+ ++GG+KVS KIGVI +L+EK D +L+GG M+FTF KA G VGSS VEEDK+
Sbjct: 183 NPEKPYVVVLGGAKVSDKIGVITNLMEKADRILIGGAMMFTFLKALGKEVGSSRVEEDKI 242
Query: 249 DLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPAT-AIPDGWMGLDVGPDAIKS 307
DLA L+EKAK KGV ++LP D VIA K KVV IP+GWMGLD+GP+ I+
Sbjct: 243 DLAKELVEKAKEKGVEIVLPVDAVIAQKIEPGVEKKVVRIDDGIPEGWMGLDIGPETIEL 302
Query: 308 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKV 367
F + L KT++WNGPMGVFE D FA GT+ +A +A L+ KG T++GGGDS AAV K
Sbjct: 303 FKQKLSDAKTVVWNGPMGVFEIDDFAEGTKQVALAIAALTEKGAITVVGGGDSAAAVNKF 362
Query: 368 GLADKMSHISTGGGASLELLEGKTLPGVLAL 398
GL DK SH+STGGGASLE LEGK LPG+ ++
Sbjct: 363 GLEDKFSHVSTGGGASLEFLEGKELPGIASM 393
>pdb|3UWD|A Chain A, Crystal Structure Of Phosphoglycerate Kinase From Bacillus
Anthracis
Length = 394
Score = 414 bits (1064), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/392 (54%), Positives = 287/392 (73%), Gaps = 5/392 (1%)
Query: 10 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPK 69
+++ DLKGKRVF RVD NVP + ITD+ R+RAA+PTI+YL+ GAKVIL+SHLGRPK
Sbjct: 6 IRDVDLKGKRVFCRVDFNVPXKEG-KITDETRIRAALPTIQYLVEQGAKVILASHLGRPK 64
Query: 70 G-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEE 128
G + L P+ RL ELLG +VK A++ G ++ VA EG VL+LENVRF+ EE
Sbjct: 65 GQAVEELRLTPVAARLGELLGKDVKKADEAFGPVAQEXVAAXNEGDVLVLENVRFYAGEE 124
Query: 129 KNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVS 188
KND E AK+ A+LAD++VNDAFG+AHRAHAST G+A +L P+V+G L +KEL+ L A+S
Sbjct: 125 KNDAELAKEFAALADIFVNDAFGAAHRAHASTAGIADYL-PAVSGLLXEKELEVLGKALS 183
Query: 189 NPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKL 248
NP++PFAAI+GG+KV KIG+I LL+KVD L++GGG+ +TF KA GH +G SL E+DK+
Sbjct: 184 NPERPFAAIIGGAKVKDKIGLIRHLLDKVDNLIIGGGLAYTFVKALGHEIGLSLCEDDKI 243
Query: 249 DLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSF 308
+LA + AK KGV+ P DVVI ++F+ A +K+V +IP W G+D+GP + +
Sbjct: 244 ELAKEFXQLAKEKGVNFYXPVDVVITEEFSETATTKIVGIDSIPSNWEGVDIGPKTREIY 303
Query: 309 SEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVG 368
++ + +K ++WNGP GVFE FA GT+A+ + LA+ +G ++IGGGDS AAVEK G
Sbjct: 304 ADVIKNSKLVVWNGPXGVFEXTPFAEGTKAVGQALAD--AEGTYSVIGGGDSAAAVEKFG 361
Query: 369 LADKMSHISTGGGASLELLEGKTLPGVLALDD 400
ADK SHISTGGGASLE EGK LPGV+ L+D
Sbjct: 362 XADKXSHISTGGGASLEFXEGKELPGVVCLND 393
>pdb|3Q3V|A Chain A, Crystal Structure Of Phosphoglycerate Kinase From
Campylobacter Jejuni.
pdb|3Q3V|B Chain B, Crystal Structure Of Phosphoglycerate Kinase From
Campylobacter Jejuni
Length = 403
Score = 388 bits (997), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/391 (50%), Positives = 267/391 (68%), Gaps = 5/391 (1%)
Query: 10 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPK 69
+K+ DL K+VF+R D NVP DD LNITDD R+R+A+PTI+Y + +G VIL+SHLGRPK
Sbjct: 10 IKDIDLAKKKVFIRCDFNVPQDDFLNITDDRRIRSAIPTIRYCLDNGCSVILASHLGRPK 69
Query: 70 GVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEK 129
++ KYSL+P+ RL+ LL E+ A D IGE+ + + G +LLLEN+RF K E K
Sbjct: 70 EISSKYSLEPVAKRLARLLDKEIVXAKDVIGEDAKTKAXNLKAGEILLLENLRFEKGETK 129
Query: 130 NDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFL--KPSVAGFLMQKELDYLVGAV 187
ND AK+LAS +Y+NDAFG HRAH+S E + KF K AGFL+QKE+D+ +
Sbjct: 130 NDENLAKELASXVQVYINDAFGVCHRAHSSVEAITKFFDEKHKGAGFLLQKEIDFASNLI 189
Query: 188 SNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDK 247
+P +PF A+VGGSKVS K+ + +LL KVD L++GGG FTF KA G+ +G+SL+EE+
Sbjct: 190 KHPARPFVAVVGGSKVSGKLQALTNLLPKVDKLIIGGGXAFTFLKALGYDIGNSLLEEEL 249
Query: 248 LDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKS 307
L+ A ++ K K+ GV + LP DVV A + D K VPA IP+GW GLD+GP +++
Sbjct: 250 LEEANKILTKGKNLGVKIYLPVDVVAAPACSQDVPXKFVPAQEIPNGWXGLDIGPASVRL 309
Query: 308 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKV 367
F E + +TI WNGP GVFE DKF+ G+ + ++E T+++GGGD+ V +
Sbjct: 310 FKEVISDAQTIWWNGPXGVFEIDKFSKGSIKXSHYISE---GHATSVVGGGDTADVVARA 366
Query: 368 GLADKMSHISTGGGASLELLEGKTLPGVLAL 398
G AD+ + ISTGGGASLEL+EGK LPGV AL
Sbjct: 367 GDADEXTFISTGGGASLELIEGKELPGVKAL 397
>pdb|1QPG|A Chain A, 3-Phosphoglycerate Kinase, Mutation R65q
Length = 415
Score = 387 bits (993), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/409 (50%), Positives = 278/409 (67%), Gaps = 21/409 (5%)
Query: 10 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAK-VILSSHLGRP 68
+++ DLK KRVF+RVD NVPLD IT + R+ AA+PTIKY++ H + V+L+SHLG+P
Sbjct: 8 VQDLDLKDKRVFIRVDFNVPLDGK-KITSNQRIVAALPTIKYVLEHHPRYVVLASHLGQP 66
Query: 69 KG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEE 127
G KYSL P+ L LLG +V NDC+G EVE V G V+LLEN+R+H EE
Sbjct: 67 NGERNEKYSLAPVAKELQSLLGKDVTFLNDCVGPEVEAAVKASAPGSVILLENLRYHIEE 126
Query: 128 E-------------KNDPE-FAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAG 173
E K D + F +L+SLAD+Y+NDAFG+AHRAH+S G L AG
Sbjct: 127 EGSRKVDGQKVKASKEDVQKFRHELSSLADVYINDAFGTAHRAHSSMVGFD--LPQRAAG 184
Query: 174 FLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKA 233
FL++KEL Y A+ NP +PF AI+GG+KV+ KI +I++LL+KVD +++GGGM FTF K
Sbjct: 185 FLLEKELKYFGKALENPTRPFLAILGGAKVADKIQLIDNLLDKVDSIIIGGGMAFTFKKV 244
Query: 234 -QGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVP-ATAI 291
+ +G S+ ++ ++ LMEKAK+KGV ++LP D +IAD F+ADAN+K V I
Sbjct: 245 LENTEIGDSIFDKAGAEIVPKLMEKAKAKGVEVVLPVDFIIADAFSADANTKTVTDKEGI 304
Query: 292 PDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGV 351
P GW GLD GP++ K F+ + KTI+WNGP GVFEF+KFAAGT+A+ ++ + S G
Sbjct: 305 PAGWQGLDNGPESRKLFAATVAKAKTIVWNGPPGVFEFEKFAAGTKALLDEVVKSSAAGN 364
Query: 352 TTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 400
T IIGGGD+ +K G+ DK+SH+STGGGASLELLEGK LPGV L +
Sbjct: 365 TVIIGGGDTATVAKKYGVTDKISHVSTGGGASLELLEGKELPGVAFLSE 413
>pdb|1V6S|A Chain A, Crystal Structure Of Phosphoglycerate Kinase From Thermus
Thermophilus Hb8
pdb|1V6S|B Chain B, Crystal Structure Of Phosphoglycerate Kinase From Thermus
Thermophilus Hb8
Length = 390
Score = 380 bits (977), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/394 (51%), Positives = 271/394 (68%), Gaps = 6/394 (1%)
Query: 7 VSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLG 66
+ L + D KGKRV VRVD NVP+ D + D+ R+ ++PT+++L+ GA ++L SHLG
Sbjct: 1 MRTLLDLDPKGKRVLVRVDYNVPVQDG-KVQDETRILESLPTLRHLLAGGASLVLLSHLG 59
Query: 67 RPKGVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAE-IPEGGVLLLENVRFHK 125
RPKG PKYSL P+ L L E + A G E + AE + G VLLLENVRF
Sbjct: 60 RPKGPDPKYSLAPVGEALRAHL-PEARFAPFPPGSEEARREAEALRPGEVLLLENVRFEP 118
Query: 126 EEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVG 185
EEKNDPE + + A L + +V DAFGSAHRAHAS GVA+ L P+ AGFLM+KE+ L
Sbjct: 119 GEEKNDPELSARYARLGEAFVLDAFGSAHRAHASVVGVARLL-PAYAGFLMEKEVRALSR 177
Query: 186 AVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEE 245
+ +P++P+A ++GG+KVS KIGVIESLL ++D LL+GG M FTF KA G VG SLVEE
Sbjct: 178 LLKDPERPYAVVLGGAKVSDKIGVIESLLPRIDRLLIGGAMAFTFLKALGGEVGRSLVEE 237
Query: 246 DKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAI 305
D+LDLA L+ +A++ GV + LP DVV A++ A ++V PA AIP +MGLD+GP
Sbjct: 238 DRLDLAKDLLGRAEALGVRVYLPEDVVAAERIEAGVETRVFPARAIPVPYMGLDIGPKTR 297
Query: 306 KSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVE 365
++F+ AL+ +T+ WNGPMGVFE F GT A+ + +A L +G T++GGGDSVAAV
Sbjct: 298 EAFARALEGARTVFWNGPMGVFEVPPFDEGTLAVGQAIAAL--EGAFTVVGGGDSVAAVN 355
Query: 366 KVGLADKMSHISTGGGASLELLEGKTLPGVLALD 399
++GL ++ H+STGGGASLE LE TLPG+ L+
Sbjct: 356 RLGLKERFGHVSTGGGASLEFLEKGTLPGLEVLE 389
>pdb|2IE8|A Chain A, Crystal Structure Of Thermus Caldophilus Phosphoglycerate
Kinase In The Open Conformation
Length = 390
Score = 380 bits (977), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/393 (51%), Positives = 271/393 (68%), Gaps = 6/393 (1%)
Query: 8 SVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGR 67
+ L + D KGKRV VRVD NVP+ D + D+ R+ ++PT+++L+ GA ++L SHLGR
Sbjct: 2 ATLLDLDPKGKRVLVRVDYNVPVQDG-KVQDETRILESLPTLRHLLAGGASLVLLSHLGR 60
Query: 68 PKGVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAE-IPEGGVLLLENVRFHKE 126
PKG P+YSL P+ L L E + A G E + AE + G VLLLENVRF
Sbjct: 61 PKGPDPRYSLAPVGEALRAHL-PEARFAPFPPGSEEARREAEALRPGEVLLLENVRFEPG 119
Query: 127 EEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGA 186
EEKNDPE + + A L + +V DAFGSAHRAHAS GVA+ L P+ AGFLM+KE+ L
Sbjct: 120 EEKNDPELSARYARLGEAFVLDAFGSAHRAHASVVGVARLL-PAYAGFLMEKEVRALSRL 178
Query: 187 VSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEED 246
+ +P++P+A ++GG+KVS KIGVIESLL ++D LL+GG M FTF KA G VG SLVEED
Sbjct: 179 LKDPERPYAVVLGGAKVSDKIGVIESLLPRIDRLLIGGAMAFTFLKALGGEVGRSLVEED 238
Query: 247 KLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIK 306
+LDLA L+ +A++ GV + LP DVV A++ A ++V PA AIP +MGLD+GP +
Sbjct: 239 RLDLAKDLLGRAEALGVRVYLPEDVVAAERIEAGVETRVFPARAIPVPYMGLDIGPKTRE 298
Query: 307 SFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEK 366
+F+ AL+ +T+ WNGPMGVFE F GT A+ + +A L +G T++GGGDSVAAV +
Sbjct: 299 AFARALEGARTVFWNGPMGVFEVPPFDEGTLAVGQAIAAL--EGAFTVVGGGDSVAAVNR 356
Query: 367 VGLADKMSHISTGGGASLELLEGKTLPGVLALD 399
+GL ++ H+STGGGASLE LE TLPG+ L+
Sbjct: 357 LGLKERFGHVSTGGGASLEFLEKGTLPGLEVLE 389
>pdb|1VJC|A Chain A, Structure Of Pig Muscle Pgk Complexed With Mgatp
pdb|1VJD|A Chain A, Structure Of Pig Muscle Pgk Complexed With Atp
Length = 416
Score = 380 bits (975), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/412 (48%), Positives = 275/412 (66%), Gaps = 23/412 (5%)
Query: 9 VLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAK-VILSSHLGR 67
L + D+KGKRV +RVD NVP+ +N IT++ R++AA+P+IK+ + +GAK V+L SHLGR
Sbjct: 7 TLDKLDVKGKRVVMRVDFNVPMKNN-QITNNQRIKAAIPSIKFCLDNGAKSVVLMSHLGR 65
Query: 68 PKGVT--PKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHK 125
P G+ KYSL+P+ L LLG +V DC+G EVEK A+ G V+LLEN+RFH
Sbjct: 66 PDGIPMPDKYSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACADPAAGSVILLENLRFHV 125
Query: 126 EEE-----------KNDPE----FAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPS 170
EEE K DP F L+ L D+YVNDAFG+AHRAH+S GV L
Sbjct: 126 EEEGKGKDASGSKVKADPAKIEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVN--LPKK 183
Query: 171 VAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTF 230
GFLM+KEL+Y A+ +P++PF AI+GG+KV+ KI +I ++L+KV+ +++GGGM FTF
Sbjct: 184 AGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTF 243
Query: 231 YKA-QGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANS-KVVPA 288
K +G+SL +E+ + LM KA+ GV + LP D V ADKF +A + + A
Sbjct: 244 LKVLNNMEIGTSLFDEEGSKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVA 303
Query: 289 TAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSG 348
+ IP GWMGLD GP++ K +SEA+ K I+WNGP+GVFE++ FA GT+A+ ++ + +
Sbjct: 304 SGIPAGWMGLDCGPESSKKYSEAVARAKQIVWNGPVGVFEWEAFAQGTKALMDEVVKATS 363
Query: 349 KGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 400
+G TIIGGGD+ K DK+SH+STGGGASLELLEGK LPGV AL +
Sbjct: 364 RGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKVLPGVDALSN 415
>pdb|2ZGV|A Chain A, Crystal Structure Of Human Phosphoglycerate Kinase Bound
To D-Adp
pdb|3C39|A Chain A, Crystal Structure Of Human Phosphoglycerate Kinase Bound
To 3-Phosphoglycerate
pdb|3C39|B Chain B, Crystal Structure Of Human Phosphoglycerate Kinase Bound
To 3-Phosphoglycerate
pdb|3C3A|A Chain A, Crystal Structure Of Human Phosphoglycerate Kinase Bound
To 3-Phosphoglycerate And L-Adp
pdb|3C3A|B Chain B, Crystal Structure Of Human Phosphoglycerate Kinase Bound
To 3-Phosphoglycerate And L-Adp
pdb|3C3B|A Chain A, Crystal Structure Of Human Phosphoglycerate Kinase Bound
To D-Cdp
pdb|3C3B|B Chain B, Crystal Structure Of Human Phosphoglycerate Kinase Bound
To D-Cdp
pdb|3C3C|A Chain A, Crystal Structure Of Human Phosphoglycerate Kinase Bound
To 3-Phosphoglycerate And L-Cdp
pdb|3C3C|B Chain B, Crystal Structure Of Human Phosphoglycerate Kinase Bound
To 3-Phosphoglycerate And L-Cdp
Length = 420
Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/412 (48%), Positives = 274/412 (66%), Gaps = 23/412 (5%)
Query: 9 VLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAK-VILSSHLGR 67
L + D+KGKRV +RVD NVP+ +N IT++ R++AAVP+IK+ + +GAK V+L SHLGR
Sbjct: 11 TLDKLDVKGKRVVMRVDFNVPMKNN-QITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGR 69
Query: 68 PKGVT--PKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHK 125
P GV KYSL+P+ L LLG +V DC+G EVEK A G V+LLEN+RFH
Sbjct: 70 PDGVPMPDKYSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRFHV 129
Query: 126 EEE-----------KNDPE----FAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPS 170
EEE K +P F L+ L D+YVNDAFG+AHRAH+S GV L
Sbjct: 130 EEEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVN--LPQK 187
Query: 171 VAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTF 230
GFLM+KEL+Y A+ +P++PF AI+GG+KV+ KI +I ++L+KV+ +++GGGM FTF
Sbjct: 188 AGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTF 247
Query: 231 YKA-QGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANS-KVVPA 288
K +G+SL +E+ + LM KA+ GV + LP D V ADKF +A + + A
Sbjct: 248 LKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVA 307
Query: 289 TAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSG 348
+ IP GWMGLD GP++ K ++EA+ K I+WNGP+GVFE++ FA GT+A+ ++ + +
Sbjct: 308 SGIPAGWMGLDCGPESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATS 367
Query: 349 KGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 400
+G TIIGGGD+ K DK+SH+STGGGASLELLEGK LPGV AL +
Sbjct: 368 RGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKVLPGVDALSN 419
>pdb|2Y3I|A Chain A, The Structure Of The Fully Closed Conformation Of Human
Pgk In Complex With L-Adp, 3pg And The Tsa Aluminium
Tetrafluoride
pdb|2Y3I|D Chain D, The Structure Of The Fully Closed Conformation Of Human
Pgk In Complex With L-Adp, 3pg And The Tsa Aluminium
Tetrafluoride
Length = 416
Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/412 (48%), Positives = 274/412 (66%), Gaps = 23/412 (5%)
Query: 9 VLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAK-VILSSHLGR 67
L + D+KGKRV +RVD NVP+ +N IT++ R++AAVP+IK+ + +GAK V+L SHLGR
Sbjct: 8 TLDKLDVKGKRVVMRVDFNVPMKNN-QITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGR 66
Query: 68 PKGVT--PKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHK 125
P GV KYSL+P+ L LLG +V DC+G EVEK A G V+LLEN+RFH
Sbjct: 67 PDGVPMPDKYSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRFHV 126
Query: 126 EEE-----------KNDPE----FAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPS 170
EEE K +P F L+ L D+YVNDAFG+AHRAH+S GV L
Sbjct: 127 EEEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVN--LPQK 184
Query: 171 VAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTF 230
GFLM+KEL+Y A+ +P++PF AI+GG+KV+ KI +I ++L+KV+ +++GGGM FTF
Sbjct: 185 AGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTF 244
Query: 231 YKA-QGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANS-KVVPA 288
K +G+SL +E+ + LM KA+ GV + LP D V ADKF +A + + A
Sbjct: 245 LKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVA 304
Query: 289 TAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSG 348
+ IP GWMGLD GP++ K ++EA+ K I+WNGP+GVFE++ FA GT+A+ ++ + +
Sbjct: 305 SGIPAGWMGLDCGPESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATS 364
Query: 349 KGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 400
+G TIIGGGD+ K DK+SH+STGGGASLELLEGK LPGV AL +
Sbjct: 365 RGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKVLPGVDALSN 416
>pdb|2XE6|A Chain A, The Complete Reaction Cycle Of Human Phosphoglycerate
Kinase: The Open Binary Complex With 3pg
pdb|2XE7|A Chain A, The Complete Reaction Cycle Of Human Phosphoglycerate
Kinase: The Open Ternary Complex With 3pg And Adp
pdb|2XE8|A Chain A, The Complete Reaction Cycle Of Human Phosphoglycerate
Kinase: The Open Ternary Complex With 3pg And Amp-Pnp
pdb|2YBE|A Chain A, The Structure Of The Fully Closed Conformation Of Human
Pgk In Complex With L-Adp, 3pg And The Tsa Aluminium
Tetrafluoride At 2.0 A Resolution
Length = 417
Score = 378 bits (970), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/411 (48%), Positives = 274/411 (66%), Gaps = 23/411 (5%)
Query: 10 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAK-VILSSHLGRP 68
L + D+KGKRV +RVD NVP+ +N IT++ R++AAVP+IK+ + +GAK V+L SHLGRP
Sbjct: 9 LDKLDVKGKRVVMRVDFNVPMKNN-QITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRP 67
Query: 69 KGVT--PKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKE 126
GV KYSL+P+ L LLG +V DC+G EVEK A G V+LLEN+RFH E
Sbjct: 68 DGVPMPDKYSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRFHVE 127
Query: 127 EE-----------KNDPE----FAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSV 171
EE K +P F L+ L D+YVNDAFG+AHRAH+S GV L
Sbjct: 128 EEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVN--LPQKA 185
Query: 172 AGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFY 231
GFLM+KEL+Y A+ +P++PF AI+GG+KV+ KI +I ++L+KV+ +++GGGM FTF
Sbjct: 186 GGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTFL 245
Query: 232 KA-QGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANS-KVVPAT 289
K +G+SL +E+ + LM KA+ GV + LP D V ADKF +A + + A+
Sbjct: 246 KVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVAS 305
Query: 290 AIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGK 349
IP GWMGLD GP++ K ++EA+ K I+WNGP+GVFE++ FA GT+A+ ++ + + +
Sbjct: 306 GIPAGWMGLDCGPESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSR 365
Query: 350 GVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 400
G TIIGGGD+ K DK+SH+STGGGASLELLEGK LPGV AL +
Sbjct: 366 GCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKVLPGVDALSN 416
>pdb|2WZB|A Chain A, The Catalytically Active Fully Closed Conformation Of
Human Phosphoglycerate Kinase In Complex With Adp, 3pg
And Magnesium Trifluoride
pdb|2WZC|A Chain A, The Catalytically Active Fully Closed Conformation Of
Human Phosphoglycerate Kinase In Complex With Adp, 3pg
And Aluminium Tetrafluoride
pdb|2X13|A Chain A, The Catalytically Active Fully Closed Conformation Of
Human Phosphoglycerate Kinase In Complex With Adp And
3phosphoglycerate
pdb|2X15|A Chain A, The Catalytically Active Fully Closed Conformation Of
Human Phosphoglycerate Kinase In Complex With Adp And
1,3- Bisphosphoglycerate
Length = 416
Score = 378 bits (970), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/411 (48%), Positives = 274/411 (66%), Gaps = 23/411 (5%)
Query: 10 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAK-VILSSHLGRP 68
L + D+KGKRV +RVD NVP+ +N IT++ R++AAVP+IK+ + +GAK V+L SHLGRP
Sbjct: 8 LDKLDVKGKRVVMRVDFNVPMKNN-QITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRP 66
Query: 69 KGVT--PKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKE 126
GV KYSL+P+ L LLG +V DC+G EVEK A G V+LLEN+RFH E
Sbjct: 67 DGVPMPDKYSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRFHVE 126
Query: 127 EE-----------KNDPE----FAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSV 171
EE K +P F L+ L D+YVNDAFG+AHRAH+S GV L
Sbjct: 127 EEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVN--LPQKA 184
Query: 172 AGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFY 231
GFLM+KEL+Y A+ +P++PF AI+GG+KV+ KI +I ++L+KV+ +++GGGM FTF
Sbjct: 185 GGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTFL 244
Query: 232 KA-QGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANS-KVVPAT 289
K +G+SL +E+ + LM KA+ GV + LP D V ADKF +A + + A+
Sbjct: 245 KVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVAS 304
Query: 290 AIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGK 349
IP GWMGLD GP++ K ++EA+ K I+WNGP+GVFE++ FA GT+A+ ++ + + +
Sbjct: 305 GIPAGWMGLDCGPESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSR 364
Query: 350 GVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 400
G TIIGGGD+ K DK+SH+STGGGASLELLEGK LPGV AL +
Sbjct: 365 GCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKVLPGVDALSN 415
>pdb|3PGK|A Chain A, The Structure Of Yeast Phosphoglycerate Kinase At 0.25 Nm
Resolution
Length = 416
Score = 377 bits (969), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/409 (50%), Positives = 273/409 (66%), Gaps = 21/409 (5%)
Query: 10 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAK-VILSSHLGRP 68
+++ DLK KRVF+RVD NVPLD IT + R+ AA+PTIKY++ H + V+L+SHLGRP
Sbjct: 9 VQDLDLKDKRVFIRVDFNVPLDGK-KITSNQRIVAALPTIKYVLEHHPRYVVLASHLGRP 67
Query: 69 KG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEE 127
G KYSL P+ L LLG +V NDC+G EVE V G V+LLEN+R+H EE
Sbjct: 68 NGERNEKYSLAPVAKELQSLLGKDVTFLNDCVGPEVEAAVKASAPGSVILLENLRYHIEE 127
Query: 128 E-------------KNDPE-FAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAG 173
E K D + F +L+SLAD+Y+NDAFG+AHRAH+S G L AG
Sbjct: 128 EGSRKVDGQKVKASKEDVQKFRHELSSLADVYINDAFGTAHRAHSSMVGFD--LPQRAAG 185
Query: 174 FLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKA 233
FL++KEL Y A+ NP +PF AI+GG+KV+ KI +I++LL+KVD +++GGGM FTF K
Sbjct: 186 FLLEKELKYFGKALENPTRPFLAILGGAKVADKIQLIDNLLDKVDSIIIGGGMAFTFKKV 245
Query: 234 -QGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVP-ATAI 291
+ +G S+ ++ LMEKAK+KGV ++LP D +IAD F+A AN+K V I
Sbjct: 246 LENTEIGDSIFDKAVGPEIAKLMEKAKAKGVEVVLPVDFIIADAFSASANTKTVTDKEGI 305
Query: 292 PDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGV 351
P GW GLD GP++ K F+ + I+WNGP GVFEF+KFAAGT+A+ ++ + S G
Sbjct: 306 PAGWQGLDNGPESRKLFAATVAKATVILWNGPPGVFEFEKFAAGTKALLDEVVKSSAAGN 365
Query: 352 TTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 400
T IIGGGD+ +K G+ DK+SH+STGGGASLELLEGK LPGV L +
Sbjct: 366 TVIIGGGDTATVAKKYGVTDKISHVSTGGGASLELLEGKELPGVAFLSE 414
>pdb|2P9Q|A Chain A, Crystal Structure Of Phosphoglycerate Kinase-2
pdb|2P9Q|B Chain B, Crystal Structure Of Phosphoglycerate Kinase-2
pdb|2P9T|A Chain A, Crystal Structure Of Phosphoglycerate Kinase-2 Bound To 3-
Phosphoglycerate
pdb|2PAA|A Chain A, Crystal Structure Of Phosphoglycerate Kinase-2 Bound To
Atp And 3pg
pdb|2PAA|B Chain B, Crystal Structure Of Phosphoglycerate Kinase-2 Bound To
Atp And 3pg
Length = 416
Score = 377 bits (967), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/413 (48%), Positives = 273/413 (66%), Gaps = 27/413 (6%)
Query: 10 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAK-VILSSHLGRP 68
L + DLKGKRV +RVD NVP+ +N IT++ R++AA+P+IK+ + +GAK V+L SHLGRP
Sbjct: 8 LDKVDLKGKRVIMRVDFNVPMKNN-QITNNQRIKAAIPSIKHCLDNGAKSVVLMSHLGRP 66
Query: 69 KGVT--PKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKE 126
G+ KYSL+P+ L LL +V DC+G EVE+ A G ++LLEN+RFH E
Sbjct: 67 DGIPMPDKYSLEPVADELKSLLNKDVIFLKDCVGPEVEQACANPDNGSIILLENLRFHVE 126
Query: 127 EEKN-----------DPE----FAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSV 171
EE DP F L+ L D+YVNDAFG+AHRAH+S GV L
Sbjct: 127 EEGKGKDSSGKKISADPAKVEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVN--LPQKA 184
Query: 172 AGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFY 231
+GFLM+KELDY A+ P++PF AI+GG+KV KI +I+++L+KV+ +++GGGM +TF
Sbjct: 185 SGFLMKKELDYFSKALEKPERPFLAILGGAKVKDKIQLIKNMLDKVNFMIIGGGMAYTFL 244
Query: 232 KA-QGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPAT- 289
K + +G+SL +E+ + +MEKA+ GV ++ P D V DKF D N+KV AT
Sbjct: 245 KELKNMQIGASLFDEEGATIVKEIMEKAEKNGVKIVFPVDFVTGDKF--DENAKVGQATI 302
Query: 290 --AIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELS 347
IP GWMGLD GP++IK ++ + K I+WNGP+GVFE+D FA GT+A+ ++ + +
Sbjct: 303 ESGIPSGWMGLDCGPESIKINAQIVAQAKLIVWNGPIGVFEWDAFAKGTKALMDEVVKAT 362
Query: 348 GKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 400
G TIIGGGD+ K G DK+SH+STGGGASLELLEGK LPGV AL +
Sbjct: 363 SNGCVTIIGGGDTATCCAKWGTEDKVSHVSTGGGASLELLEGKILPGVEALSN 415
>pdb|2X14|A Chain A, The Catalytically Active Fully Closed Conformation Of
Human Phosphoglycerate Kinase K219a Mutant In Complex
With Amp-Pcp And 3pg
Length = 416
Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/411 (48%), Positives = 273/411 (66%), Gaps = 23/411 (5%)
Query: 10 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAK-VILSSHLGRP 68
L + D+KGKRV +RVD NVP+ +N IT++ R++AAVP+IK+ + +GAK V+L SHLGRP
Sbjct: 8 LDKLDVKGKRVVMRVDFNVPMKNN-QITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRP 66
Query: 69 KGVT--PKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKE 126
GV KYSL+P+ L LLG +V DC+G EVEK A G V+LLEN+RFH E
Sbjct: 67 DGVPMPDKYSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRFHVE 126
Query: 127 EE-----------KNDPE----FAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSV 171
EE K +P F L+ L D+YVNDAFG+AHRAH+S GV L
Sbjct: 127 EEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVN--LPQKA 184
Query: 172 AGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFY 231
GFLM+KEL+Y A+ +P++PF AI+GG+KV+ I +I ++L+KV+ +++GGGM FTF
Sbjct: 185 GGFLMKKELNYFAKALESPERPFLAILGGAKVADAIQLINNMLDKVNEMIIGGGMAFTFL 244
Query: 232 KA-QGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANS-KVVPAT 289
K +G+SL +E+ + LM KA+ GV + LP D V ADKF +A + + A+
Sbjct: 245 KVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVAS 304
Query: 290 AIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGK 349
IP GWMGLD GP++ K ++EA+ K I+WNGP+GVFE++ FA GT+A+ ++ + + +
Sbjct: 305 GIPAGWMGLDCGPESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSR 364
Query: 350 GVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 400
G TIIGGGD+ K DK+SH+STGGGASLELLEGK LPGV AL +
Sbjct: 365 GCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKVLPGVDALSN 415
>pdb|2WZD|A Chain A, The Catalytically Active Fully Closed Conformation Of
Human Phosphoglycerate Kinase K219a Mutant In Complex
With Adp, 3pg And Aluminium Trifluoride
Length = 417
Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/411 (48%), Positives = 273/411 (66%), Gaps = 23/411 (5%)
Query: 10 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAK-VILSSHLGRP 68
L + D+KGKRV +RVD NVP+ +N IT++ R++AAVP+IK+ + +GAK V+L SHLGRP
Sbjct: 9 LDKLDVKGKRVVMRVDFNVPMKNN-QITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRP 67
Query: 69 KGVT--PKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKE 126
GV KYSL+P+ L LLG +V DC+G EVEK A G V+LLEN+RFH E
Sbjct: 68 DGVPMPDKYSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRFHVE 127
Query: 127 EE-----------KNDPE----FAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSV 171
EE K +P F L+ L D+YVNDAFG+AHRAH+S GV L
Sbjct: 128 EEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVN--LPQKA 185
Query: 172 AGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFY 231
GFLM+KEL+Y A+ +P++PF AI+GG+KV+ I +I ++L+KV+ +++GGGM FTF
Sbjct: 186 GGFLMKKELNYFAKALESPERPFLAILGGAKVADAIQLINNMLDKVNEMIIGGGMAFTFL 245
Query: 232 KA-QGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANS-KVVPAT 289
K +G+SL +E+ + LM KA+ GV + LP D V ADKF +A + + A+
Sbjct: 246 KVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVAS 305
Query: 290 AIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGK 349
IP GWMGLD GP++ K ++EA+ K I+WNGP+GVFE++ FA GT+A+ ++ + + +
Sbjct: 306 GIPAGWMGLDCGPESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSR 365
Query: 350 GVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 400
G TIIGGGD+ K DK+SH+STGGGASLELLEGK LPGV AL +
Sbjct: 366 GCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKVLPGVDALSN 416
>pdb|3OZ7|A Chain A, Crystal Structure Of 3-Phosphopglycerate Kinase Of
Plasmodium Falciparum
pdb|3OZ7|B Chain B, Crystal Structure Of 3-Phosphopglycerate Kinase Of
Plasmodium Falciparum
Length = 417
Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/419 (48%), Positives = 276/419 (65%), Gaps = 24/419 (5%)
Query: 1 MAAKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGA-KV 59
+ K S+S LK D+K K+V VRVD NVP+++ + I D NR+ A +PTI +L GA K+
Sbjct: 4 LGNKLSISDLK--DIKNKKVLVRVDFNVPIENGI-IKDTNRITATLPTINHLKKEGASKI 60
Query: 60 ILSSHLGRPKGV-TPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLL 118
IL SH GRP G+ KY+LKP+ L LLG EV NDC+G+EVE + E V+LL
Sbjct: 61 ILISHCGRPDGLRNEKYTLKPVAETLKGLLGEEVLFLNDCVGKEVEDKINAAKENSVILL 120
Query: 119 ENVRFHKEEE--------------KNDPE-FAKKLASLADLYVNDAFGSAHRAHASTEGV 163
EN+RFH EEE K D E F L LAD+++NDAFG+AHRAH+S GV
Sbjct: 121 ENLRFHIEEEGKGVDANGNKVKANKEDVEKFQNDLTKLADVFINDAFGTAHRAHSSMVGV 180
Query: 164 AKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLG 223
+K S GFLM+KEL+Y A+ NP++P AI+GG+KVS KI +I++LL+KVD +++G
Sbjct: 181 KLNVKAS--GFLMKKELEYFSKALENPQRPLLAILGGAKVSDKIQLIKNLLDKVDRMIIG 238
Query: 224 GGMIFTFYKA-QGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADAN 282
GGM +TF K +G+SL +E + +MEKAK+K V + LP D IAD F +AN
Sbjct: 239 GGMAYTFKKVLNNMKIGTSLFDEAGSKIVGEIMEKAKAKNVQIFLPVDFKIADNFDNNAN 298
Query: 283 SK-VVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAK 341
+K V IPD WMGLD GP +I+++ + + T+KT+IWNGP GVFE FA G+
Sbjct: 299 TKFVTDEEGIPDNWMGLDAGPKSIENYKDVILTSKTVIWNGPQGVFEMPNFAKGSIECLN 358
Query: 342 KLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 400
+ E++ KG TI+GGGD+ + VE+ +++SH+STGGGASLELLEGK LPGVLAL +
Sbjct: 359 LVVEVTKKGAITIVGGGDTASLVEQQNKKNEISHVSTGGGASLELLEGKELPGVLALSN 417
>pdb|1KF0|A Chain A, Crystal Structure Of Pig Muscle Phosphoglycerate Kinase
Ternary Complex With Amp-Pcp And 3pg
Length = 416
Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/412 (48%), Positives = 274/412 (66%), Gaps = 23/412 (5%)
Query: 9 VLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAK-VILSSHLGR 67
L + ++KGKRV +RVD NVP+ +N IT++ R++AAVP+IK+ + GAK V+L SHLGR
Sbjct: 7 TLDKLNVKGKRVVMRVDFNVPMKNN-QITNNQRIKAAVPSIKFCLDDGAKSVVLMSHLGR 65
Query: 68 PKG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHK 125
P G + KYSL+P+ L LLG +V DC+G EVEK A+ G V+LLEN+RFH
Sbjct: 66 PDGSPMPDKYSLQPVAVELKSLLGKDVLFLKDCVGPEVEKACADPAAGSVILLENLRFHV 125
Query: 126 EEE-----------KNDP----EFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPS 170
EEE K +P F L+ L D+YVNDAFG+AHRAH+S GV L
Sbjct: 126 EEEGKGKDASGNKVKAEPAKIKTFRASLSKLGDVYVNDAFGTAHRAHSSMVGVN--LPKK 183
Query: 171 VAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTF 230
GFLM+KEL+Y A+ +P++PF AI+GG+KV+ KI +I ++L+KV+ +++GGGM FTF
Sbjct: 184 AGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTF 243
Query: 231 YKA-QGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANS-KVVPA 288
K +G+SL +E+ + +LM KA+ GV + LP D V ADKF A + + A
Sbjct: 244 LKVLNNMEIGTSLFDEEGAKIVKNLMSKAEKNGVKITLPVDFVTADKFDEHAKTGQATVA 303
Query: 289 TAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSG 348
+ IP GWMGLD GP++ K +SEA+ K I+WNGP+GVFE++ FA GT+A+ ++ + +
Sbjct: 304 SGIPAGWMGLDCGPESSKKYSEAVARAKQIVWNGPVGVFEWEAFAQGTKALMDEVVKATS 363
Query: 349 KGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 400
+G TIIGGGD+ K DK+SH+STGGGASLELLEGK LPGV AL +
Sbjct: 364 RGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKVLPGVDALSN 415
>pdb|4DG5|A Chain A, Crystal Structure Of Staphylococcal Phosphoglycerate
Kinase
Length = 403
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/405 (49%), Positives = 273/405 (67%), Gaps = 16/405 (3%)
Query: 2 AAKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVIL 61
+AKK VS L DLKGK V VR D NVPL D IT+DNR+ A+PTI+Y++ G K++L
Sbjct: 8 SAKKIVSDL---DLKGKTVLVRADFNVPLKDG-EITNDNRIVQALPTIQYIIEQGGKIVL 63
Query: 62 SSHLGRPKGVT--PKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLE 119
SHLG+ K + K +L+P+ LS+ L EV + GE++E + ++ EG VLL+E
Sbjct: 64 FSHLGKVKEESDKAKLTLRPVAEDLSKKLDKEVVFVPETRGEKLEAAIKDLKEGDVLLVE 123
Query: 120 NVRFH----KEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFL 175
N R+ K+E KNDPE K ASL D++VNDAFG+AHR HAS G++ L+ + AGFL
Sbjct: 124 NTRYEDLDGKKESKNDPELGKYWASLGDVFVNDAFGTAHREHASNVGISTHLE-TAAGFL 182
Query: 176 MQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQG 235
M KE+ ++ G V++P KP AI+GG+KVS KI VI++L+ D +++GGGM +TF KAQG
Sbjct: 183 MDKEIKFIGGVVNDPHKPVVAILGGAKVSDKINVIKNLVNIADKIIIGGGMAYTFLKAQG 242
Query: 236 HSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGW 295
+G SL+EEDK+D A L+EK G ++LP D +A +F+ DA VVP+ +IP
Sbjct: 243 KEIGISLLEEDKIDFAKDLLEK---HGDKIVLPVDTKVAKEFSNDAKITVVPSDSIPADQ 299
Query: 296 MGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTII 355
G+D+GP+ +K F++ L+ T++WNGPMGVFEF FA GT + K +A L K TII
Sbjct: 300 EGMDIGPNTVKLFADELEGAHTVVWNGPMGVFEFSNFAQGTIGVCKAIANL--KDAITII 357
Query: 356 GGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 400
GGGDS AA +G + +HISTGGGASLE LEGK LPG+ A+++
Sbjct: 358 GGGDSAAAAISLGFENDFTHISTGGGASLEYLEGKELPGIKAINN 402
>pdb|13PK|A Chain A, Ternary Complex Of Phosphoglycerate Kinase From
Trypanosoma Brucei
pdb|13PK|B Chain B, Ternary Complex Of Phosphoglycerate Kinase From
Trypanosoma Brucei
pdb|13PK|C Chain C, Ternary Complex Of Phosphoglycerate Kinase From
Trypanosoma Brucei
pdb|13PK|D Chain D, Ternary Complex Of Phosphoglycerate Kinase From
Trypanosoma Brucei
pdb|16PK|A Chain A, Phosphoglycerate Kinase From Trypanosoma Brucei
Bisubstrate Analog
Length = 415
Score = 366 bits (940), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/419 (47%), Positives = 272/419 (64%), Gaps = 28/419 (6%)
Query: 4 KKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSS 63
KKS++ E DLKGK+V +RVD NVP+ N IT+D R+R+A+PT+K ++ G +L S
Sbjct: 2 KKSIN---ECDLKGKKVLIRVDFNVPVK-NGKITNDYRIRSALPTLKKVLTEGGSCVLMS 57
Query: 64 HLGRPKGV-----------------TPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKM 106
HLGRPKG+ K +LKP+ RLSELL V A DC+ +
Sbjct: 58 HLGRPKGIPMAQAGKIRSTGGVPGFQQKATLKPVAKRLSELLLRPVTFAPDCL--NAADV 115
Query: 107 VAEIPEGGVLLLENVRFHKEE----EKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEG 162
V+++ G V+LLENVRF+KEE K+ AK LAS D+Y++DAFG+AHR A+ G
Sbjct: 116 VSKMSPGDVVLLENVRFYKEEGSKKAKDREAMAKILASYGDVYISDAFGTAHRDSATMTG 175
Query: 163 VAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLL 222
+ K L AG+LM+KE+ Y + NP +P AIVGG+KVS KI +++++L+++D LL+
Sbjct: 176 IPKILGNGAAGYLMEKEISYFAKVLGNPPRPLVAIVGGAKVSDKIQLLDNMLQRIDYLLI 235
Query: 223 GGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADAN 282
GG M +TF KAQG+S+G S EE KL+ A SL++KA+ + V ++LP D V +F A +
Sbjct: 236 GGAMAYTFLKAQGYSIGKSKCEESKLEFARSLLKKAEDRKVQVILPIDHVCHTEFKAVDS 295
Query: 283 SKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKK 342
+ IP+G M LD+GP I+ + + + K+ IWNGPMGVFE ++ GT AIAK
Sbjct: 296 PLITEDQNIPEGHMALDIGPKTIEKYVQTIGKCKSAIWNGPMGVFEMVPYSKGTFAIAKA 355
Query: 343 LAELSGK-GVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 400
+ + + G+ +IIGGGDS +A E G A +MSH+STGGGASLELLEGKTLPGV LDD
Sbjct: 356 MGRGTHEHGLMSIIGGGDSASAAELSGEAKRMSHVSTGGGASLELLEGKTLPGVTVLDD 414
>pdb|3OZA|A Chain A, Crystal Structure Of Plasmodium Falciparum
3-Phosphoglycerate Kinase
pdb|3OZA|B Chain B, Crystal Structure Of Plasmodium Falciparum
3-Phosphoglycerate Kinase
pdb|3OZA|C Chain C, Crystal Structure Of Plasmodium Falciparum
3-Phosphoglycerate Kinase
Length = 424
Score = 363 bits (933), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/419 (47%), Positives = 271/419 (64%), Gaps = 24/419 (5%)
Query: 1 MAAKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGA-KV 59
+ K S+S LK D+K K+V VRVD NVP+++ + I D NR+ A +PTI +L GA K+
Sbjct: 10 LGNKLSISDLK--DIKNKKVLVRVDFNVPIENGI-IKDTNRITATLPTINHLKKEGASKI 66
Query: 60 ILSSHLGRPKGV-TPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLL 118
IL SH GRP G+ KY+LKP+ L LLG EV NDC+G+EVE + E V+LL
Sbjct: 67 ILISHCGRPDGLRNEKYTLKPVAETLKGLLGEEVLFLNDCVGKEVEDKINAAKENSVILL 126
Query: 119 ENVRFHKEEE--------------KNDPE-FAKKLASLADLYVNDAFGSAHRAHASTEGV 163
EN+RFH EEE K D E F L LAD+++NDAFG+AHRAH+S GV
Sbjct: 127 ENLRFHIEEEGKGVDANGNKVKANKEDVEKFQNDLTKLADVFINDAFGTAHRAHSSXVGV 186
Query: 164 AKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLG 223
+K S GFL +KEL+Y A+ NP++P AI+GG+KVS KI +I++LL+KVD ++G
Sbjct: 187 KLNVKAS--GFLXKKELEYFSKALENPQRPLLAILGGAKVSDKIQLIKNLLDKVDRXIIG 244
Query: 224 GGMIFTFYKA-QGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADAN 282
GG +TF K +G+SL +E + + EKAK+K V + LP D IAD F +AN
Sbjct: 245 GGXAYTFKKVLNNXKIGTSLFDEAGSKIVGEIXEKAKAKNVQIFLPVDFKIADNFDNNAN 304
Query: 283 SK-VVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAK 341
+K V IPD W GLD GP +I+++ + + T+KT+IWNGP GVFE FA G+
Sbjct: 305 TKFVTDEEGIPDNWXGLDAGPKSIENYKDVILTSKTVIWNGPQGVFEXPNFAKGSIECLN 364
Query: 342 KLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 400
+ E++ KG TI+GGGD+ + VE+ +++SH+STGGGASLELLEGK LPGVLAL +
Sbjct: 365 LVVEVTKKGAITIVGGGDTASLVEQQNKKNEISHVSTGGGASLELLEGKELPGVLALSN 423
>pdb|1LTK|A Chain A, Crystal Structure Of Phosphoglycerate Kinase From
Plasmodium Falciparum, In The Open Conformation
pdb|1LTK|B Chain B, Crystal Structure Of Phosphoglycerate Kinase From
Plasmodium Falciparum, In The Open Conformation
pdb|1LTK|C Chain C, Crystal Structure Of Phosphoglycerate Kinase From
Plasmodium Falciparum, In The Open Conformation
Length = 425
Score = 363 bits (932), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/419 (47%), Positives = 271/419 (64%), Gaps = 24/419 (5%)
Query: 1 MAAKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGA-KV 59
+ K S+S LK D+K K+V VRVD NVP+++ + I D NR+ A +PTI +L GA K+
Sbjct: 11 LGNKLSISDLK--DIKNKKVLVRVDFNVPIENGI-IKDTNRITATLPTINHLKKEGASKI 67
Query: 60 ILSSHLGRPKGV-TPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLL 118
IL SH GRP G+ KY+LKP+ L LLG EV NDC+G+EVE + E V+LL
Sbjct: 68 ILISHCGRPDGLRNEKYTLKPVAETLKGLLGEEVLFLNDCVGKEVEDKINAAKENSVILL 127
Query: 119 ENVRFHKEEE--------------KNDPE-FAKKLASLADLYVNDAFGSAHRAHASTEGV 163
EN+RFH EEE K D E F L LAD+++NDAFG+AHRAH+S GV
Sbjct: 128 ENLRFHIEEEGKGVDANGNKVKANKEDVEKFQNDLTKLADVFINDAFGTAHRAHSSXVGV 187
Query: 164 AKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLG 223
+K S GFL +KEL+Y A+ NP++P AI+GG+KVS KI +I++LL+KVD ++G
Sbjct: 188 KLNVKAS--GFLXKKELEYFSKALENPQRPLLAILGGAKVSDKIQLIKNLLDKVDRXIIG 245
Query: 224 GGMIFTFYKA-QGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADAN 282
GG +TF K +G+SL +E + + EKAK+K V + LP D IAD F +AN
Sbjct: 246 GGXAYTFKKVLNNXKIGTSLFDEAGSKIVGEIXEKAKAKNVQIFLPVDFKIADNFDNNAN 305
Query: 283 SK-VVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAK 341
+K V IPD W GLD GP +I+++ + + T+KT+IWNGP GVFE FA G+
Sbjct: 306 TKFVTDEEGIPDNWXGLDAGPKSIENYKDVILTSKTVIWNGPQGVFEXPNFAKGSIECLN 365
Query: 342 KLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 400
+ E++ KG TI+GGGD+ + VE+ +++SH+STGGGASLELLEGK LPGVLAL +
Sbjct: 366 LVVEVTKKGAITIVGGGDTASLVEQQNKKNEISHVSTGGGASLELLEGKELPGVLALSN 424
>pdb|1HDI|A Chain A, Pig Muscle 3-Phosphoglycerate Kinase Complexed With 3-Pg
And Mgadp
Length = 413
Score = 356 bits (914), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 194/413 (46%), Positives = 263/413 (63%), Gaps = 27/413 (6%)
Query: 10 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAK-VILSSHLGRP 68
L + ++KGKRV +RVD NVP+ IT++ R++AAVP+IK+ + GAK V+L SHLGRP
Sbjct: 5 LDKLNVKGKRVVMRVDFNVPMAA-AQITNNARIKAAVPSIKFCLDDGAKSVVLMSHLGRP 63
Query: 69 KG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKE 126
G + KYSL+P+ L LG V DC+G VEK A+ G V+LLEN+RFH E
Sbjct: 64 DGSPMPDKYSLQPVAAELKSALGKAVLFLKDCVGPAVEKACADPAAGSVILLENLRFHVE 123
Query: 127 EEKNDPE---------------FAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSV 171
EE + F L++L D+YVNDAFG+AHRAH+S GV L
Sbjct: 124 EEGKGKDASGNKAAGEPAKIKAFRASLSALGDVYVNDAFGTAHRAHSSMVGVN--LPKKA 181
Query: 172 AGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFY 231
FLM+KEL+Y A +P++PF AI+GG+KV+ KI +I ++L+KV+ +++GGGM FTF
Sbjct: 182 GAFLMKKELNYFAAAAESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTFL 241
Query: 232 KA-QGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPAT- 289
K +G+SL +E + +LM KA + GV + LP D V ADKF D +K+ AT
Sbjct: 242 KVLNNMEIGTSLFDEAGKKIVKNLMSKAAANGVKITLPVDFVTADKF--DEQAKIGQATV 299
Query: 290 --AIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELS 347
IP GWMGLD GP + +SEA+ K I+WNGP+GVFE++ FA GT+A+ ++ + +
Sbjct: 300 ASGIPAGWMGLDCGPKSSAKYSEAVARAKQIVWNGPVGVFEWEAFAQGTKALMDEVVKAT 359
Query: 348 GKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 400
+G TIIGGGD+ K D +SH+STGGGASLELLEGK LPGV AL +
Sbjct: 360 SRGCITIIGGGDTATCCAKWNTEDNVSHVSTGGGASLELLEGKVLPGVDALSN 412
>pdb|4FEY|A Chain A, An X-Ray Structure Of A Putative Phosphogylcerate Kinase
With Bound Adp From Francisella Tularensis Subsp.
Tularensis Schu S4
Length = 395
Score = 340 bits (872), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 180/392 (45%), Positives = 265/392 (67%), Gaps = 12/392 (3%)
Query: 6 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHL 65
S LK+ DLK K+V VRVD NVP+ D +T R+ AA+PTI+Y++ G VIL SHL
Sbjct: 5 SFLTLKDVDLKDKKVLVRVDFNVPVKDG-KVTSKVRIEAAIPTIQYILDQGGAVILMSHL 63
Query: 66 GRPKG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRF 123
GRP ++SL+P+ LSE++ VK A D + ++ G +++ ENVRF
Sbjct: 64 GRPTEGEYDSQFSLEPVAKALSEIINKPVKFAKDWLDG------VDVKAGEIVMCENVRF 117
Query: 124 HKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYL 183
+ E+K+ + +KK+ASL D++V DAF +AHRA AST GVAK++ + AG L+ E+ L
Sbjct: 118 NSGEKKSTDDLSKKIASLGDVFVMDAFATAHRAQASTYGVAKYIPVACAGILLTNEIQAL 177
Query: 184 VGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLV 243
A+ +PKKP AAIVGGSKVSTK+ V+ +LL+KV+IL++GGG+ TF KA+G VG+SL
Sbjct: 178 EKALKSPKKPMAAIVGGSKVSTKLSVLNNLLDKVEILIVGGGIANTFIKAEGFDVGNSLY 237
Query: 244 EEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPD 303
E+D + AT ++ KAK+ GV++ +P DV +A +F+ +A + + + + M LD+GP+
Sbjct: 238 EQDLVAEATEILAKAKALGVNIPVPVDVRVAKEFSENAQAIIKKVSDVVADEMILDIGPE 297
Query: 304 AIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAA 363
+ K +E L + TI+WNGP+GVFEFD FA GT+A++ +A+ ++ GGGD++AA
Sbjct: 298 SQKIIAELLKSANTILWNGPVGVFEFDNFAEGTKALSLAIAQ---SHAFSVAGGGDTIAA 354
Query: 364 VEKVGLADKMSHISTGGGASLELLEGKTLPGV 395
+EK G+ D++S+IST GGA LE LEGK LP +
Sbjct: 355 IEKFGIKDQVSYISTAGGAFLEFLEGKKLPAI 386
>pdb|4EHJ|A Chain A, An X-Ray Structure Of A Putative Phosphogylcerate Kinase
From Francisella Tularensis Subsp. Tularensis Schu S4
pdb|4EHJ|B Chain B, An X-Ray Structure Of A Putative Phosphogylcerate Kinase
From Francisella Tularensis Subsp. Tularensis Schu S4
Length = 392
Score = 336 bits (862), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 179/392 (45%), Positives = 263/392 (67%), Gaps = 12/392 (3%)
Query: 6 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHL 65
S LK+ DLK K+V VRVD NVP+ D +T R+ AA+PTI+Y++ G VIL SHL
Sbjct: 2 SFLTLKDVDLKDKKVLVRVDFNVPVKDG-KVTSKVRIEAAIPTIQYILDQGGAVILXSHL 60
Query: 66 GRPKG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRF 123
GRP ++SL+P+ LSE++ VK A D + ++ G ++ ENVRF
Sbjct: 61 GRPTEGEYDSQFSLEPVAKALSEIINKPVKFAKDWLDG------VDVKAGEIVXCENVRF 114
Query: 124 HKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYL 183
+ E+K+ + +KK+ASL D++V DAF +AHRA AST GVAK++ + AG L+ E+ L
Sbjct: 115 NSGEKKSTDDLSKKIASLGDVFVXDAFATAHRAQASTYGVAKYIPVACAGILLTNEIQAL 174
Query: 184 VGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLV 243
A+ +PKKP AAIVGGSKVSTK+ V+ +LL+KV+IL++GGG+ TF KA+G VG+SL
Sbjct: 175 EKALKSPKKPXAAIVGGSKVSTKLSVLNNLLDKVEILIVGGGIANTFIKAEGFDVGNSLY 234
Query: 244 EEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPD 303
E+D + AT ++ KAK+ GV++ +P DV +A +F+ +A + + + + LD+GP+
Sbjct: 235 EQDLVAEATEILAKAKALGVNIPVPVDVRVAKEFSENAQAIIKKVSDVVADEXILDIGPE 294
Query: 304 AIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAA 363
+ K +E L + TI+WNGP+GVFEFD FA GT+A++ +A+ ++ GGGD++AA
Sbjct: 295 SQKIIAELLKSANTILWNGPVGVFEFDNFAEGTKALSLAIAQ---SHAFSVAGGGDTIAA 351
Query: 364 VEKVGLADKMSHISTGGGASLELLEGKTLPGV 395
+EK G+ D++S+IST GGA LE LEGK LP +
Sbjct: 352 IEKFGIKDQVSYISTAGGAFLEFLEGKKLPAI 383
>pdb|1FW8|A Chain A, Circularly Permuted Phosphoglycerate Kinase From Yeast:
Pgk P72
Length = 416
Score = 326 bits (835), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 174/343 (50%), Positives = 231/343 (67%), Gaps = 18/343 (5%)
Query: 74 KYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEE----- 128
KYSL P+ L LLG +V NDC+G EVE V G V+LLEN+R+H EEE
Sbjct: 3 KYSLAPVAKELQSLLGKDVTFLNDCVGPEVEAAVKASAPGSVILLENLRYHIEEEGSRKV 62
Query: 129 --------KND-PEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKE 179
K D +F +L+SLAD+Y+NDAFG+AHRAH+S G L AGFL++KE
Sbjct: 63 DGQKVKASKEDVQKFRHELSSLADVYINDAFGTAHRAHSSMVGFD--LPQRAAGFLLEKE 120
Query: 180 LDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKA-QGHSV 238
L Y A+ NP +PF AI+GG+KV+ KI +I++LL+KVD +++GGGM FTF K + +
Sbjct: 121 LKYFGKALENPTRPFLAILGGAKVADKIQLIDNLLDKVDSIIIGGGMAFTFKKVLENTEI 180
Query: 239 GSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVP-ATAIPDGWMG 297
G S+ ++ ++ LMEKAK+KGV ++LP D +IAD F+ADAN+K V IP GW G
Sbjct: 181 GDSIFDKAGAEIVPKLMEKAKAKGVEVVLPVDFIIADAFSADANTKTVTDKEGIPAGWQG 240
Query: 298 LDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGG 357
LD GP++ K F+ + KTI+WNGP GVFEF+KFAAGT+A+ ++ + S G T IIGG
Sbjct: 241 LDNGPESRKLFAATVAKAKTIVWNGPPGVFEFEKFAAGTKALLDEVVKSSAAGNTVIIGG 300
Query: 358 GDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 400
GD+ +K G+ DK+SH+STGGGASLELLEGK LPGV L +
Sbjct: 301 GDTATVAKKYGVTDKISHVSTGGGASLELLEGKELPGVAFLSE 343
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 54/74 (72%), Gaps = 5/74 (6%)
Query: 1 MAAKKSVSV---LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGA 57
++ KKS+S +++ DLK KRVF+RVD NVPLD IT + R+ AA+PTIKY++ H
Sbjct: 341 LSEKKSLSSKLSVQDLDLKDKRVFIRVDFNVPLDGK-KITSNQRIVAALPTIKYVLEHHP 399
Query: 58 K-VILSSHLGRPKG 70
+ V+L+SHLGRP G
Sbjct: 400 RYVVLASHLGRPNG 413
>pdb|1ZMR|A Chain A, Crystal Structure Of The E. Coli Phosphoglycerate Kinase
Length = 387
Score = 311 bits (797), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 175/397 (44%), Positives = 252/397 (63%), Gaps = 17/397 (4%)
Query: 6 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHL 65
SV + + DL GKRVF+R DLNVP+ D +T D R+RA++PTI+ + GAKV+++SHL
Sbjct: 2 SVIKMTDLDLAGKRVFIRADLNVPVKDG-KVTSDARIRASLPTIELALKQGAKVMVTSHL 60
Query: 66 GRPKG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRF 123
GRP ++SL P+V L + L V++ D + ++ EG +++LENVRF
Sbjct: 61 GRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDG------VDVAEGELVVLENVRF 114
Query: 124 HKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYL 183
+K E+K+D +KK A+L D++V DAFG+AHRA AST G+ KF + AG L+ ELD L
Sbjct: 115 NKGEKKDDETLSKKYAALCDVFVMDAFGTAHRAQASTHGIGKFADVACAGPLLAAELDAL 174
Query: 184 VGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLV 243
A+ P +P AIVGGSKVSTK+ V++SL + D L++GGG+ TF AQGH VG SL
Sbjct: 175 GKALKEPARPMVAIVGGSKVSTKLTVLDSLSKIADQLIVGGGIANTFIAAQGHDVGKSLY 234
Query: 244 EEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPD 303
E D +D A L+ ++ +P+DV +A +F+ A + + + LD+G
Sbjct: 235 EADLVDEAKRLLTTC-----NIPVPSDVRVATEFSETAPATLKSVNDVKADEQILDIGDA 289
Query: 304 AIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAA 363
+ + +E L KTI+WNGP+GVFEF F GTE +A +A+ +I GGGD++AA
Sbjct: 290 SAQELAEILKNAKTILWNGPVGVFEFPNFRKGTEIVANAIADSEA---FSIAGGGDTLAA 346
Query: 364 VEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 400
++ G+ADK+S+ISTGGGA LE +EGK LP V L++
Sbjct: 347 IDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEE 383
>pdb|2CUN|A Chain A, Crystal Structure Of Phosphoglycerate Kinase From
Pyrococcus Horikoshii Ot3
pdb|2CUN|B Chain B, Crystal Structure Of Phosphoglycerate Kinase From
Pyrococcus Horikoshii Ot3
Length = 410
Score = 214 bits (546), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 144/410 (35%), Positives = 218/410 (53%), Gaps = 34/410 (8%)
Query: 10 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPK 69
L++ + K VF+RVDLN P+ D I D R +A +PTI+YL+ GAKV++ +H G+P
Sbjct: 4 LEDFNFHNKTVFLRVDLNSPMKDG-KIISDARFKAVLPTIRYLIESGAKVVIGTHQGKP- 61
Query: 70 GVTPKYSLKPLVPR-LSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEE 128
+ Y+ R LSELL V+ D G + + E+ G V +LEN+RF EE
Sbjct: 62 -YSEDYTTTEEHARVLSELLDQHVEYIEDIFGRYAREKIKELKSGEVAILENLRFSAEEV 120
Query: 129 KNDP-------EFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELD 181
KN P KKL+ + D VNDAF +AHR+ S G A+ +KP + GFLM+KE++
Sbjct: 121 KNKPIEECEKTFLVKKLSKVIDYVVNDAFATAHRSQPSLVGFAR-IKPMIMGFLMEKEIE 179
Query: 182 YLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLL--EKVDILLLGGGMIFTFYKAQGHSVG 239
L+ A + P ++GG+KV + V+E++L E+ D++L GG + F A+G +G
Sbjct: 180 ALMRAYYSKDSPKIYVLGGAKVEDSLKVVENVLRRERADLVLTGGLVANVFTLAKGFDLG 239
Query: 240 SSLVEEDK----LDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDG- 294
VE K LD E + P D FA D + V + +
Sbjct: 240 RKNVEFMKKKGLLDYVKHAEEILDEFYPYIRTPVD------FAVDYKGERVEIDLLSENR 293
Query: 295 -----WMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGK 349
+ +D+G + + E L + I+ NGPMGVFE ++FA GT + K +A+
Sbjct: 294 GLLHQYQIMDIGKRTAEKYREILMKARIIVANGPMGVFEREEFAIGTVEVFKAIADSPA- 352
Query: 350 GVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 399
+++GGG S+A+++K G+ ++HISTGGGA L G+ LP + AL
Sbjct: 353 --FSVLGGGHSIASIQKYGITG-ITHISTGGGAMLSFFAGEELPVLRALQ 399
>pdb|3L44|A Chain A, Crystal Structure Of Bacillus Anthracis Heml-1, Glutamate
Semialdehyde Aminotransferase
pdb|3L44|B Chain B, Crystal Structure Of Bacillus Anthracis Heml-1, Glutamate
Semialdehyde Aminotransferase
Length = 434
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 163 VAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIG 208
V KF K L ++ L+++VG V++P + F A+ GG+ ++ + G
Sbjct: 2 VVKFTKSEA---LHKEALEHIVGGVNSPSRSFKAVGGGAPIAXERG 44
>pdb|1VHV|A Chain A, Crystal Structure Of Diphthine Synthase
pdb|1VHV|B Chain B, Crystal Structure Of Diphthine Synthase
Length = 268
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 239 GSSLVEEDKLDLATS---LMEKAKSKGVSLLLPTDVVIADKFAA 279
G +VE ++ DL + L+E+AKSK V LL+P D +A +A
Sbjct: 63 GKRVVELERSDLEENSFRLIERAKSKSVVLLVPGDPXVATTHSA 106
>pdb|2IYO|A Chain A, Structural Characterization Of A Bacterial 6pdh Reveals
Aspects Of Specificity, Mechanism And Mode Of Inhibition
Length = 472
Score = 28.5 bits (62), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 154 HRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESL 213
+R + TE V F + + K L+ VG++ P++ + G+ I + L
Sbjct: 33 NRTTSKTEEV--FKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDATIKSLLPL 90
Query: 214 LEKVDILLLGGGMIF 228
L+ DIL+ GG F
Sbjct: 91 LDIGDILIDGGNTHF 105
>pdb|2IYP|A Chain A, Product Rup
pdb|2IYP|B Chain B, Product Rup
pdb|2IYP|C Chain C, Product Rup
Length = 473
Score = 28.5 bits (62), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 154 HRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESL 213
+R + TE V F + + K L+ VG++ P++ + G+ I + L
Sbjct: 34 NRTTSKTEEV--FKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDATIKSLLPL 91
Query: 214 LEKVDILLLGGGMIF 228
L+ DIL+ GG F
Sbjct: 92 LDIGDILIDGGNTHF 106
>pdb|2IZ0|A Chain A, Pex Inhibitor-Home Data
pdb|2IZ0|B Chain B, Pex Inhibitor-Home Data
pdb|2IZ0|C Chain C, Pex Inhibitor-Home Data
pdb|2IZ1|A Chain A, 6pdh Complexed With Pex Inhibitor Synchrotron Data
pdb|2IZ1|B Chain B, 6pdh Complexed With Pex Inhibitor Synchrotron Data
pdb|2IZ1|C Chain C, 6pdh Complexed With Pex Inhibitor Synchrotron Data
Length = 474
Score = 28.5 bits (62), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 154 HRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESL 213
+R + TE V F + + K L+ VG++ P++ + G+ I + L
Sbjct: 35 NRTTSKTEEV--FKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDATIKSLLPL 92
Query: 214 LEKVDILLLGGGMIF 228
L+ DIL+ GG F
Sbjct: 93 LDIGDILIDGGNTHF 107
>pdb|1J7X|A Chain A, Crystal Structure Of A Functional Unit Of
Interphotoreceptor Retinoid-Binding Protein (Irbp)
Length = 302
Score = 28.1 bits (61), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 17/31 (54%)
Query: 293 DGWMGLDVGPDAIKSFSEALDTTKTIIWNGP 323
D W+G V PDAI EALD K II P
Sbjct: 269 DYWLGGGVVPDAIVLADEALDKAKEIIAFHP 299
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.314 0.134 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,664,685
Number of Sequences: 62578
Number of extensions: 499570
Number of successful extensions: 1432
Number of sequences better than 100.0: 60
Number of HSP's better than 100.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 1233
Number of HSP's gapped (non-prelim): 61
length of query: 401
length of database: 14,973,337
effective HSP length: 101
effective length of query: 300
effective length of database: 8,652,959
effective search space: 2595887700
effective search space used: 2595887700
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 52 (24.6 bits)