BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040814
(664 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 135/291 (46%), Gaps = 59/291 (20%)
Query: 405 ELKGFNFQTIAAATNNFSTTNKLGEGGFGPVYKGKLLDGQVIAVKRLSGRT--------- 455
+LK F+ + + A++NFS N LG GGFG VYKG+L DG ++AVKRL
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQ 83
Query: 456 --------------IRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKK-QLNWSKRIT 500
+RL G + ER+LVY +M N S+ + + + + L+W KR
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 143
Query: 501 IIEGIAQGLIYLHKYSRLRMNESKVNTNRVV----------------------------- 531
I G A+GL YLH + ++ V ++
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAV 203
Query: 532 -GTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCY-----DEERPLNLVGYL 585
GT G++APEY G S K DVF +GV+LLE+++G++ + D+ L+ V L
Sbjct: 204 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 263
Query: 586 WKEGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCL 636
KE K L++ L G + E+ + I LLC + RP M++VV L
Sbjct: 264 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 135/291 (46%), Gaps = 59/291 (20%)
Query: 405 ELKGFNFQTIAAATNNFSTTNKLGEGGFGPVYKGKLLDGQVIAVKRL-SGRT-------- 455
+LK F+ + + A++NF N LG GGFG VYKG+L DG ++AVKRL RT
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ 75
Query: 456 --------------IRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKK-QLNWSKRIT 500
+RL G + ER+LVY +M N S+ + + + + L+W KR
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 135
Query: 501 IIEGIAQGLIYLHKYSRLRMNESKVNTNRVV----------------------------- 531
I G A+GL YLH + ++ V ++
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAV 195
Query: 532 -GTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCY-----DEERPLNLVGYL 585
G G++APEY G S K DVF +GV+LLE+++G++ + D+ L+ V L
Sbjct: 196 RGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255
Query: 586 WKEGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCL 636
KE K L++ L G + E+ + I LLC + RP M++VV L
Sbjct: 256 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 101/218 (46%), Gaps = 62/218 (28%)
Query: 409 FNFQTIAAATNNFSTT------NKLGEGGFGPVYKGKLLDGQVIAVKRLSGRT------- 455
F+F + TNNF NK+GEGGFG VYKG ++ +AVK+L+
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 73
Query: 456 -------------------IRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWS 496
+ L+G S G + LVY +MPN SL + L+W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 497 KRITIIEGIAQGLIYLH---------KYSRLRMNES-------------------KVNTN 528
R I +G A G+ +LH K + + ++E+ V +
Sbjct: 134 MRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXS 193
Query: 529 RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSG 566
R+VGT YMAPE A+ G ++ K+D++SFGV+LLEI++G
Sbjct: 194 RIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 100/218 (45%), Gaps = 62/218 (28%)
Query: 409 FNFQTIAAATNNFSTT------NKLGEGGFGPVYKGKLLDGQVIAVKRLSGRT------- 455
F+F + TNNF NK+GEGGFG VYKG ++ +AVK+L+
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 73
Query: 456 -------------------IRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWS 496
+ L+G S G + LVY +MPN SL + L+W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 497 KRITIIEGIAQGLIYLH---------KYSRLRMNES-------------------KVNTN 528
R I +G A G+ +LH K + + ++E+ V
Sbjct: 134 MRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXX 193
Query: 529 RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSG 566
R+VGT YMAPE A+ G ++ K+D++SFGV+LLEI++G
Sbjct: 194 RIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 100/218 (45%), Gaps = 62/218 (28%)
Query: 409 FNFQTIAAATNNFSTT------NKLGEGGFGPVYKGKLLDGQVIAVKRLSGRT------- 455
F+F + TNNF NK+GEGGFG VYKG ++ +AVK+L+
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 67
Query: 456 -------------------IRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWS 496
+ L+G S G + LVY +MPN SL + L+W
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 127
Query: 497 KRITIIEGIAQGLIYLH---------KYSRLRMNES-------------------KVNTN 528
R I +G A G+ +LH K + + ++E+ V
Sbjct: 128 MRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXX 187
Query: 529 RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSG 566
R+VGT YMAPE A+ G ++ K+D++SFGV+LLEI++G
Sbjct: 188 RIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 224
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 118/274 (43%), Gaps = 54/274 (19%)
Query: 414 IAAATNNFSTTNKLGEGGFGPVYKGKLLDGQVIAVKRLSGRT------------------ 455
+ ATNNF +G G FG VYKG L DG +A+KR + +
Sbjct: 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCR 93
Query: 456 ----IRLMGCSLHGAERILVYEFMPNKSLDFFIFDS-VKKKQLNWSKRITIIEGIAQGLI 510
+ L+G E IL+Y++M N +L ++ S + ++W +R+ I G A+GL
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLH 153
Query: 511 YLHKYSRLRMNESKVNT----------------------------NRVVGTYGYMAPEYA 542
YLH + + + +N V GT GY+ PEY
Sbjct: 154 YLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYF 213
Query: 543 MNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKE---GKASELMEAAL 599
+ G ++ K+DV+SFGV+L E++ R +NL + + G+ ++++ L
Sbjct: 214 IKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNL 273
Query: 600 DGPCPENELLRCIHAGLLCVHDQAVNRPTMADVV 633
L + + C+ + +RP+M DV+
Sbjct: 274 ADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 118/274 (43%), Gaps = 54/274 (19%)
Query: 414 IAAATNNFSTTNKLGEGGFGPVYKGKLLDGQVIAVKRLSGRT------------------ 455
+ ATNNF +G G FG VYKG L DG +A+KR + +
Sbjct: 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCR 93
Query: 456 ----IRLMGCSLHGAERILVYEFMPNKSLDFFIFDS-VKKKQLNWSKRITIIEGIAQGLI 510
+ L+G E IL+Y++M N +L ++ S + ++W +R+ I G A+GL
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLH 153
Query: 511 YLHKYSRLRMNESKVNT----------------------------NRVVGTYGYMAPEYA 542
YLH + + + +N V GT GY+ PEY
Sbjct: 154 YLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYF 213
Query: 543 MNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKE---GKASELMEAAL 599
+ G ++ K+DV+SFGV+L E++ R +NL + + G+ ++++ L
Sbjct: 214 IKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNL 273
Query: 600 DGPCPENELLRCIHAGLLCVHDQAVNRPTMADVV 633
L + + C+ + +RP+M DV+
Sbjct: 274 ADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 98/218 (44%), Gaps = 62/218 (28%)
Query: 409 FNFQTIAAATNNFSTT------NKLGEGGFGPVYKGKLLDGQVIAVKRLSGRT------- 455
F+F + TNNF NK GEGGFG VYKG ++ +AVK+L+
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 64
Query: 456 -------------------IRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWS 496
+ L+G S G + LVY + PN SL + L+W
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 497 KRITIIEGIAQGLIYLH---------KYSRLRMNES-------------------KVNTN 528
R I +G A G+ +LH K + + ++E+ V +
Sbjct: 125 XRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXS 184
Query: 529 RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSG 566
R+VGT Y APE A+ G ++ K+D++SFGV+LLEI++G
Sbjct: 185 RIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITG 221
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 92/234 (39%), Gaps = 60/234 (25%)
Query: 402 MKHELKGF-NFQTIAAATNNFSTTNKLGEGGFGPVYKGKLLDG---QVIAVKRL------ 451
M H L+GF N + F+ +++G+G FG VYKG +D +V+A+K +
Sbjct: 2 MAH-LRGFANQHSRVDPEELFTKLDRIGKGSFGEVYKG--IDNHTKEVVAIKIIDLEEAE 58
Query: 452 -----------------SGRTIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLN 494
S R G L + ++ E++ S D +K L
Sbjct: 59 DEIEDIQQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGS----ALDLLKPGPLE 114
Query: 495 WSKRITIIEGIAQGLIYLHKYSRL--------------------------RMNESKVNTN 528
+ TI+ I +GL YLH ++ ++ ++++ N
Sbjct: 115 ETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN 174
Query: 529 RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLV 582
VGT +MAPE KAD++S G+ +E+ G N+ R L L+
Sbjct: 175 XFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLI 228
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 112/270 (41%), Gaps = 65/270 (24%)
Query: 420 NFSTTNKLGEGGFGPVYKG---------KLLDGQ-------------VIAVKRLSGRTIR 457
+ + K+G G FG V++ K+L Q V +KRL I
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 458 L-MGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLH--- 513
L MG +V E++ SL + S ++QL+ +R+++ +A+G+ YLH
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 514 -----------------KY---------SRLRMNESKVNTNRVVGTYGYMAPEYAMNGIV 547
KY SRL+ + + +++ GT +MAPE +
Sbjct: 158 PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS-TFLSSKSAAGTPEWMAPEVLRDEPS 216
Query: 548 SMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENE 607
+ K+DV+SFGV+L E+ + ++ + + + VG+ K L+ P N
Sbjct: 217 NEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKR----------LEIPRNLNP 266
Query: 608 LLRCIHAGLLCVHDQAVNRPTMADVVSCLR 637
+ I G C ++ RP+ A ++ LR
Sbjct: 267 QVAAIIEG--CWTNEPWKRPSFATIMDLLR 294
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 82/205 (40%), Gaps = 53/205 (25%)
Query: 414 IAAATNNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSGRTIRL-MGCSLHGAERILV 471
I N+FS +G GGFG VY + D G++ A+K L + I++ G +L ERI++
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 242
Query: 472 ---------------YEFMPNKSLDFFIFDSVKKKQLNWS-------------------- 496
Y F L F I D + L++
Sbjct: 243 SLVSTGDCPFIVCMSYAFHTPDKLSF-ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEII 301
Query: 497 -------KRITIIEGIAQGLIYLHKYSRLRMNE-------SKVNTNRVVGTYGYMAPEYA 542
R + + I L ++ +R+++ SK + VGT+GYMAPE
Sbjct: 302 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVL 361
Query: 543 MNGIV-SMKADVFSFGVLLLEIVSG 566
G+ AD FS G +L +++ G
Sbjct: 362 QKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 82/205 (40%), Gaps = 53/205 (25%)
Query: 414 IAAATNNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSGRTIRL-MGCSLHGAERILV 471
I N+FS +G GGFG VY + D G++ A+K L + I++ G +L ERI++
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 472 ---------------YEFMPNKSLDFFIFDSVKKKQLNWS-------------------- 496
Y F L F I D + L++
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSF-ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEII 302
Query: 497 -------KRITIIEGIAQGLIYLHKYSRLRMNE-------SKVNTNRVVGTYGYMAPEYA 542
R + + I L ++ +R+++ SK + VGT+GYMAPE
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVL 362
Query: 543 MNGIV-SMKADVFSFGVLLLEIVSG 566
G+ AD FS G +L +++ G
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 82/205 (40%), Gaps = 53/205 (25%)
Query: 414 IAAATNNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSGRTIRL-MGCSLHGAERILV 471
I N+FS +G GGFG VY + D G++ A+K L + I++ G +L ERI++
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 472 ---------------YEFMPNKSLDFFIFDSVKKKQLNWS-------------------- 496
Y F L F I D + L++
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSF-ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEII 302
Query: 497 -------KRITIIEGIAQGLIYLHKYSRLRMNE-------SKVNTNRVVGTYGYMAPEYA 542
R + + I L ++ +R+++ SK + VGT+GYMAPE
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVL 362
Query: 543 MNGIV-SMKADVFSFGVLLLEIVSG 566
G+ AD FS G +L +++ G
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 82/205 (40%), Gaps = 53/205 (25%)
Query: 414 IAAATNNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSGRTIRL-MGCSLHGAERILV 471
I N+FS +G GGFG VY + D G++ A+K L + I++ G +L ERI++
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 472 ---------------YEFMPNKSLDFFIFDSVKKKQLNWS-------------------- 496
Y F L F I D + L++
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSF-ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEII 302
Query: 497 -------KRITIIEGIAQGLIYLHKYSRLRMNE-------SKVNTNRVVGTYGYMAPEYA 542
R + + I L ++ +R+++ SK + VGT+GYMAPE
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVL 362
Query: 543 MNGIV-SMKADVFSFGVLLLEIVSG 566
G+ AD FS G +L +++ G
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 110/270 (40%), Gaps = 65/270 (24%)
Query: 420 NFSTTNKLGEGGFGPVYKG---------KLLDGQ-------------VIAVKRLSGRTIR 457
+ + K+G G FG V++ K+L Q V +KRL I
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 458 L-MGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLH--- 513
L MG +V E++ SL + S ++QL+ +R+++ +A+G+ YLH
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 514 -----------------KY---------SRLRMNESKVNTNRVVGTYGYMAPEYAMNGIV 547
KY SRL+ + + + GT +MAPE +
Sbjct: 158 PPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXF-LXSKXAAGTPEWMAPEVLRDEPS 216
Query: 548 SMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENE 607
+ K+DV+SFGV+L E+ + ++ + + + VG+ K L+ P N
Sbjct: 217 NEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKR----------LEIPRNLNP 266
Query: 608 LLRCIHAGLLCVHDQAVNRPTMADVVSCLR 637
+ I G C ++ RP+ A ++ LR
Sbjct: 267 QVAAIIEG--CWTNEPWKRPSFATIMDLLR 294
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 88/221 (39%), Gaps = 58/221 (26%)
Query: 414 IAAATNNFSTTNKLGEGGFGPVYKGKLLDG---QVIAVKRL------------------- 451
IA F+ ++G+G FG V+KG +D QV+A+K +
Sbjct: 18 IADPEELFTKLERIGKGSFGEVFKG--IDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVL 75
Query: 452 ----SGRTIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQ 507
S + G L G++ ++ E++ S D ++ + + T+++ I +
Sbjct: 76 SQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGS----ALDLLRAGPFDEFQIATMLKEILK 131
Query: 508 GLIYLHKYSRL--------------------------RMNESKVNTNRVVGTYGYMAPEY 541
GL YLH ++ ++ ++++ N VGT +MAPE
Sbjct: 132 GLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEV 191
Query: 542 AMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLV 582
KAD++S G+ +E+ G N+ R L L+
Sbjct: 192 IQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLI 232
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 74/198 (37%), Gaps = 54/198 (27%)
Query: 421 FSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRLS-------------------------GR 454
FS ++G G FG VY + + + +V+A+K++S
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 455 TIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK 514
TI+ GC L LV E+ + D V KK L + + G QGL YLH
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLL---EVHKKPLQEVEIAAVTHGALQGLAYLHS 133
Query: 515 YSRLRMNESKVN----------------------TNRVVGTYGYMAPEYAM---NGIVSM 549
++ + + N N VGT +MAPE + G
Sbjct: 134 HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDG 193
Query: 550 KADVFSFGVLLLEIVSGR 567
K DV+S G+ +E+ +
Sbjct: 194 KVDVWSLGITCIELAERK 211
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 76/198 (38%), Gaps = 54/198 (27%)
Query: 421 FSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRLS-------------------------GR 454
FS ++G G FG VY + + + +V+A+K++S
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 455 TIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK 514
TI+ GC L LV E+ + D V KK L + + G QGL YLH
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLL---EVHKKPLQEVEIAAVTHGALQGLAYLHS 172
Query: 515 YSRLRMNESKVN----------------------TNRVVGTYGYMAPE--YAMN-GIVSM 549
++ + + N N VGT +MAPE AM+ G
Sbjct: 173 HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDG 232
Query: 550 KADVFSFGVLLLEIVSGR 567
K DV+S G+ +E+ +
Sbjct: 233 KVDVWSLGITCIELAERK 250
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 113/284 (39%), Gaps = 76/284 (26%)
Query: 417 ATNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRL-----SGRT--------------- 455
A N ++G+GGFG V+KG+L+ D V+A+K L G T
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 456 ---------IRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIA 506
++L G +H R +V EF+P L + D K + WS ++ ++ IA
Sbjct: 77 MSNLNHPNIVKLYGL-MHNPPR-MVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIA 132
Query: 507 QGLIYLH-----------------------------KYSRLRMNESKVNT-NRVVGTYGY 536
G+ Y+ K + +++ V++ + ++G + +
Sbjct: 133 LGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQW 192
Query: 537 MAPEY--AMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASEL 594
MAPE A + KAD +SF ++L I++G + Y + + + + +EG
Sbjct: 193 MAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK-IKFINMIREEG----- 246
Query: 595 MEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQ 638
+ + CP R + LC RP + +V L +
Sbjct: 247 LRPTIPEDCPP----RLRNVIELCWSGDPKKRPHFSYIVKELSE 286
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 76/194 (39%), Gaps = 49/194 (25%)
Query: 421 FSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRL--------------------SGRTIRLM 459
F KLGEG +G VYK + GQ++A+K++ S ++
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYY 90
Query: 460 GCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRL- 518
G + +V E+ S+ I ++ K L + TI++ +GL YLH ++
Sbjct: 91 GSYFKNTDLWIVMEYCGAGSVSDII--RLRNKTLTEDEIATILQSTLKGLEYLHFMRKIH 148
Query: 519 -------------------------RMNESKVNTNRVVGTYGYMAPEYAMNGIVSMKADV 553
++ + N V+GT +MAPE + AD+
Sbjct: 149 RDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADI 208
Query: 554 FSFGVLLLEIVSGR 567
+S G+ +E+ G+
Sbjct: 209 WSLGITAIEMAEGK 222
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 113/284 (39%), Gaps = 76/284 (26%)
Query: 417 ATNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRL-----SGRT--------------- 455
A N ++G+GGFG V+KG+L+ D V+A+K L G T
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 456 ---------IRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIA 506
++L G +H R +V EF+P L + D K + WS ++ ++ IA
Sbjct: 77 MSNLNHPNIVKLYGL-MHNPPR-MVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIA 132
Query: 507 QGLIYLH-----------------------------KYSRLRMNESKVNT-NRVVGTYGY 536
G+ Y+ K + +++ V++ + ++G + +
Sbjct: 133 LGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQW 192
Query: 537 MAPEY--AMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASEL 594
MAPE A + KAD +SF ++L I++G + Y + + + + +EG
Sbjct: 193 MAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK-IKFINMIREEG----- 246
Query: 595 MEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQ 638
+ + CP R + LC RP + +V L +
Sbjct: 247 LRPTIPEDCPP----RLRNVIELCWSGDPKKRPHFSYIVKELSE 286
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 111/284 (39%), Gaps = 76/284 (26%)
Query: 417 ATNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRL-----SGRT--------------- 455
A N ++G+GGFG V+KG+L+ D V+A+K L G T
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 456 ---------IRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIA 506
++L G +H R +V EF+P L + D K + WS ++ ++ IA
Sbjct: 77 MSNLNHPNIVKLYGL-MHNPPR-MVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIA 132
Query: 507 QGLIYLHK------YSRLR------------------------MNESKVNTNRVVGTYGY 536
G+ Y+ + LR +S + + ++G + +
Sbjct: 133 LGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQW 192
Query: 537 MAPEY--AMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASEL 594
MAPE A + KAD +SF ++L I++G + Y + + + + +EG
Sbjct: 193 MAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK-IKFINMIREEG----- 246
Query: 595 MEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQ 638
+ + CP R + LC RP + +V L +
Sbjct: 247 LRPTIPEDCPP----RLRNVIELCWSGDPKKRPHFSYIVKELSE 286
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 79/199 (39%), Gaps = 58/199 (29%)
Query: 421 FSTTNKLGEGGFGPVYKGKLLDG---QVIAVKRL-----------------------SGR 454
F+ K+G+G FG V+KG +D +V+A+K + S
Sbjct: 24 FTKLEKIGKGSFGEVFKG--IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 455 TIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK 514
+ G L + ++ E++ S D ++ L+ ++ TI+ I +GL YLH
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGS----ALDLLEPGPLDETQIATILREILKGLDYLHS 137
Query: 515 YSRL--------------------------RMNESKVNTNRVVGTYGYMAPEYAMNGIVS 548
++ ++ ++++ N VGT +MAPE
Sbjct: 138 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYD 197
Query: 549 MKADVFSFGVLLLEIVSGR 567
KAD++S G+ +E+ G
Sbjct: 198 SKADIWSLGITAIELARGE 216
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 106/270 (39%), Gaps = 77/270 (28%)
Query: 427 LGEGGFGPVYKGKLLDGQ-----VIAVKRL-SGRT----------------------IRL 458
+G G FG VYKG L +A+K L +G T IRL
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 459 MGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYL----HK 514
G +++ E+M N +LD F+ + K + + + + ++ GIA G+ YL +
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLRE--KDGEFSVLQLVGMLRGIAAGMKYLANMNYV 169
Query: 515 YSRLRMNESKVNTNRV--VGTYG-----------------------YMAPEYAMNGIVSM 549
+ L VN+N V V +G + APE +
Sbjct: 170 HRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTS 229
Query: 550 KADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDG---PCPEN 606
+DV+SFG+++ E+++ Y ERP W E E+M+A DG P P +
Sbjct: 230 ASDVWSFGIVMWEVMT-------YG-ERP------YW-ELSNHEVMKAINDGFRLPTPMD 274
Query: 607 ELLRCIHAGLLCVHDQAVNRPTMADVVSCL 636
+ C + RP AD+VS L
Sbjct: 275 CPSAIYQLMMQCWQQERARRPKFADIVSIL 304
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 79/199 (39%), Gaps = 58/199 (29%)
Query: 421 FSTTNKLGEGGFGPVYKGKLLDG---QVIAVKRL-----------------------SGR 454
F+ K+G+G FG V+KG +D +V+A+K + S
Sbjct: 9 FTKLEKIGKGSFGEVFKG--IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 455 TIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK 514
+ G L + ++ E++ S D ++ L+ ++ TI+ I +GL YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGS----ALDLLEPGPLDETQIATILREILKGLDYLHS 122
Query: 515 YSRL--------------------------RMNESKVNTNRVVGTYGYMAPEYAMNGIVS 548
++ ++ ++++ N VGT +MAPE
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYD 182
Query: 549 MKADVFSFGVLLLEIVSGR 567
KAD++S G+ +E+ G
Sbjct: 183 SKADIWSLGITAIELARGE 201
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 79/199 (39%), Gaps = 58/199 (29%)
Query: 421 FSTTNKLGEGGFGPVYKGKLLDG---QVIAVKRL-----------------------SGR 454
F+ K+G+G FG V+KG +D +V+A+K + S
Sbjct: 9 FTKLEKIGKGSFGEVFKG--IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 455 TIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK 514
+ G L + ++ E++ S D ++ L+ ++ TI+ I +GL YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGS----ALDLLEPGPLDETQIATILREILKGLDYLHS 122
Query: 515 YSRL--------------------------RMNESKVNTNRVVGTYGYMAPEYAMNGIVS 548
++ ++ ++++ N VGT +MAPE
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYD 182
Query: 549 MKADVFSFGVLLLEIVSGR 567
KAD++S G+ +E+ G
Sbjct: 183 SKADIWSLGITAIELARGE 201
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 79/199 (39%), Gaps = 58/199 (29%)
Query: 421 FSTTNKLGEGGFGPVYKGKLLDG---QVIAVKRL-----------------------SGR 454
F+ K+G+G FG V+KG +D +V+A+K + S
Sbjct: 29 FTKLEKIGKGSFGEVFKG--IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 86
Query: 455 TIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK 514
+ G L + ++ E++ S D ++ L+ ++ TI+ I +GL YLH
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGS----ALDLLEPGPLDETQIATILREILKGLDYLHS 142
Query: 515 YSRL--------------------------RMNESKVNTNRVVGTYGYMAPEYAMNGIVS 548
++ ++ ++++ N VGT +MAPE
Sbjct: 143 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYD 202
Query: 549 MKADVFSFGVLLLEIVSGR 567
KAD++S G+ +E+ G
Sbjct: 203 SKADIWSLGITAIELARGE 221
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 101/285 (35%), Gaps = 74/285 (25%)
Query: 427 LGEGGFGPVYKGKLLD-GQVIAVKRL------SGRT----IRLMGCSLHGAERILVYEFM 475
LG+G FG K + G+V+ +K L + RT +++M C H +
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 476 PNKSLDFFIFDSVK-----------KKQLNWSKRITIIEGIAQGLIYLHKY--------- 515
+K L+F I + +K Q WS+R++ + IA G+ YLH
Sbjct: 78 KDKRLNF-ITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNS 136
Query: 516 ------------------SRLRMNE-------------SKVNTNRVVGTYGYMAPEYAMN 544
+RL ++E + VVG +MAPE
Sbjct: 137 HNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMING 196
Query: 545 GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCP 604
K DVFSFG++L EI+ GR N + YL + + LD CP
Sbjct: 197 RSYDEKVDVFSFGIVLCEII-GRVNAD----------PDYLPRTMDFGLNVRGFLDRYCP 245
Query: 605 ENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQHFSSVLLL 649
N + C RP+ + L H + L L
Sbjct: 246 PNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAGHLPL 290
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 109/287 (37%), Gaps = 94/287 (32%)
Query: 426 KLGEGGFGPVYKGKLLD---GQV---IAVKRLS-----------------------GRTI 456
+LG+G FG VY+G D G+ +AVK ++ +
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 457 RLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKR--------ITIIEGIAQG 508
RL+G G ++V E M + L ++ S++ + N R I + IA G
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 509 LIYLHKYSRLRMNESKVNTNRV------VGTYG----------------------YMAPE 540
+ YL+ + N + N +G +G +MAPE
Sbjct: 143 MAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPE 202
Query: 541 YAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLV---GYLWKEGKASELME 596
+G+ + +D++SFGV+L EI S + E+ L V GY
Sbjct: 203 SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY------------ 250
Query: 597 AALDGP--CPE--NELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQN 639
LD P CPE +L+R +C RPT ++V+ L+ +
Sbjct: 251 --LDQPDNCPERVTDLMR------MCWQFNPNMRPTFLEIVNLLKDD 289
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 109/287 (37%), Gaps = 94/287 (32%)
Query: 426 KLGEGGFGPVYKGKLLD---GQV---IAVKRLS-----------------------GRTI 456
+LG+G FG VY+G D G+ +AVK ++ +
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 457 RLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKR--------ITIIEGIAQG 508
RL+G G ++V E M + L ++ S++ + N R I + IA G
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQMAAEIADG 143
Query: 509 LIYLHKYSRLRMNESKVNTNRV------VGTYG----------------------YMAPE 540
+ YL+ + N + N +G +G +MAPE
Sbjct: 144 MAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPE 203
Query: 541 YAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLV---GYLWKEGKASELME 596
+G+ + +D++SFGV+L EI S + E+ L V GY
Sbjct: 204 SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY------------ 251
Query: 597 AALDGP--CPE--NELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQN 639
LD P CPE +L+R +C RPT ++V+ L+ +
Sbjct: 252 --LDQPDNCPERVTDLMR------MCWQFNPNMRPTFLEIVNLLKDD 290
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 30/130 (23%)
Query: 463 LHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYS------ 516
L G E ++ EF+ +L D V + +LN + T+ E + Q L YLH
Sbjct: 112 LVGEELWVLMEFLQGGALT----DIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDI 167
Query: 517 -----------RLRMNE-------SKVNTNR--VVGTYGYMAPEYAMNGIVSMKADVFSF 556
R+++++ SK R +VGT +MAPE + + + D++S
Sbjct: 168 KSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSL 227
Query: 557 GVLLLEIVSG 566
G++++E+V G
Sbjct: 228 GIMVIEMVDG 237
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 78/210 (37%), Gaps = 64/210 (30%)
Query: 420 NFSTTNKLGEGGFGPVYKGKL--------------------------LD--GQVIAVKRL 451
N + LG G FG VY+G++ LD + + + +L
Sbjct: 46 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKL 105
Query: 452 SGRTI-RLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQ----LNWSKRITIIEGIA 506
+ + I R +G SL R ++ E M L F+ ++ + L + + IA
Sbjct: 106 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 507 QGLIYLHKYSRLRMNESKVNT-------NRV--VGTYG---------------------- 535
G YL + + + + N RV +G +G
Sbjct: 166 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+M PE M GI + K D +SFGVLL EI S
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 78/210 (37%), Gaps = 64/210 (30%)
Query: 420 NFSTTNKLGEGGFGPVYKGKL--------------------------LD--GQVIAVKRL 451
N + LG G FG VY+G++ LD + + + +L
Sbjct: 32 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKL 91
Query: 452 SGRTI-RLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQ----LNWSKRITIIEGIA 506
+ + I R +G SL R ++ E M L F+ ++ + L + + IA
Sbjct: 92 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 151
Query: 507 QGLIYLHKYSRLRMNESKVNT-------NRV--VGTYG---------------------- 535
G YL + + + + N RV +G +G
Sbjct: 152 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 211
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+M PE M GI + K D +SFGVLL EI S
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 84/217 (38%), Gaps = 57/217 (26%)
Query: 456 IRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYL--- 512
IRL G G ++V E+M N SLD F+ Q + + ++ G+ G+ YL
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSLDTFL--RTHDGQFTIMQLVGMLRGVGAGMRYLSDL 170
Query: 513 -HKYSRLRMNESKVNTNRV--VGTYG-----------------------YMAPEYAMNGI 546
+ + L V++N V V +G + APE
Sbjct: 171 GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRT 230
Query: 547 VSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDG---PC 603
S +DV+SFGV++ E+++ Y E N+ +++ + +G P
Sbjct: 231 FSSASDVWSFGVVMWEVLA-------YGERPYWNMTN--------RDVISSVEEGYRLPA 275
Query: 604 PENELLRCIHA----GLLCVHDQAVNRPTMADVVSCL 636
P + C HA L C H RP + +VS L
Sbjct: 276 P----MGCPHALHQLMLDCWHKDRAQRPRFSQIVSVL 308
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 84/217 (38%), Gaps = 57/217 (26%)
Query: 456 IRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYL--- 512
IRL G G ++V E+M N SLD F+ Q + + ++ G+ G+ YL
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSLDTFL--RTHDGQFTIMQLVGMLRGVGAGMRYLSDL 170
Query: 513 -HKYSRLRMNESKVNTNRV--VGTYG-----------------------YMAPEYAMNGI 546
+ + L V++N V V +G + APE
Sbjct: 171 GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRT 230
Query: 547 VSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDG---PC 603
S +DV+SFGV++ E+++ Y E N+ +++ + +G P
Sbjct: 231 FSSASDVWSFGVVMWEVLA-------YGERPYWNMTN--------RDVISSVEEGYRLPA 275
Query: 604 PENELLRCIHA----GLLCVHDQAVNRPTMADVVSCL 636
P + C HA L C H RP + +VS L
Sbjct: 276 P----MGCPHALHQLMLDCWHKDRAQRPRFSQIVSVL 308
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 76/179 (42%), Gaps = 40/179 (22%)
Query: 425 NKLGEGGFGPVYKGKLLDGQVIAVKRLSGRTIRLMG----------------CSLHGA-- 466
KLG G FG V+ +AVK + ++ + LH
Sbjct: 188 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 247
Query: 467 -ERI-LVYEFMPNKSL-DFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK----YSRLR 519
E I ++ EFM SL DF D K+ L K I IA+G+ ++ + + LR
Sbjct: 248 KEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQRNYIHRDLR 305
Query: 520 MNESKVNTNRV--VGTYG-----------YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
V+ + V + +G + APE G ++K+DV+SFG+LL+EIV+
Sbjct: 306 AANILVSASLVCKIADFGLARVGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 364
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 110/287 (38%), Gaps = 94/287 (32%)
Query: 426 KLGEGGFGPVYKG---KLLDGQV---IAVKRLS-----------------------GRTI 456
+LG+G FG VY+G ++ G+ +AVK ++ +
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 457 RLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKR--------ITIIEGIAQG 508
RL+G G ++V E M + L ++ S++ + N R I + IA G
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 509 LIYLHKYSRLRMNESKVNTNRV------VGTYG----------------------YMAPE 540
+ YL+ + + + N +G +G +MAPE
Sbjct: 143 MAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPE 202
Query: 541 YAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLV---GYLWKEGKASELME 596
+G+ + +D++SFGV+L EI S + E+ L V GY
Sbjct: 203 SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY------------ 250
Query: 597 AALDGP--CPE--NELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQN 639
LD P CPE +L+R +C RPT ++V+ L+ +
Sbjct: 251 --LDQPDNCPERVTDLMR------MCWQFNPKMRPTFLEIVNLLKDD 289
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 74/210 (35%), Gaps = 64/210 (30%)
Query: 420 NFSTTNKLGEGGFGPVYKGKL------LDGQVIAVKRLS--------------------- 452
N + LG G FG VY+G++ +AVK L
Sbjct: 31 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 90
Query: 453 --GRTIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQ----LNWSKRITIIEGIA 506
+R +G SL R ++ E M L F+ ++ + L + + IA
Sbjct: 91 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 150
Query: 507 QGLIYLHKYSRLRMNESKVNT-------NRV--VGTYG---------------------- 535
G YL + + + + N RV +G +G
Sbjct: 151 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 210
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+M PE M GI + K D +SFGVLL EI S
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 74/210 (35%), Gaps = 64/210 (30%)
Query: 420 NFSTTNKLGEGGFGPVYKGKL------LDGQVIAVKRLS--------------------- 452
N + LG G FG VY+G++ +AVK L
Sbjct: 32 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 91
Query: 453 --GRTIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQ----LNWSKRITIIEGIA 506
+R +G SL R ++ E M L F+ ++ + L + + IA
Sbjct: 92 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 151
Query: 507 QGLIYLHKYSRLRMNESKVNT-------NRV--VGTYG---------------------- 535
G YL + + + + N RV +G +G
Sbjct: 152 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVK 211
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+M PE M GI + K D +SFGVLL EI S
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 109/287 (37%), Gaps = 94/287 (32%)
Query: 426 KLGEGGFGPVYKGKLLD---GQV---IAVKRLS-----------------------GRTI 456
+LG+G FG VY+G D G+ +AVK ++ +
Sbjct: 21 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 80
Query: 457 RLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKR--------ITIIEGIAQG 508
RL+G G ++V E M + L ++ S++ + N R I + IA G
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQMAAEIADG 139
Query: 509 LIYLHKYSRLRMNESKVNTNRV------VGTYG----------------------YMAPE 540
+ YL+ + + + N +G +G +MAPE
Sbjct: 140 MAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPE 199
Query: 541 YAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLV---GYLWKEGKASELME 596
+G+ + +D++SFGV+L EI S + E+ L V GY
Sbjct: 200 SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY------------ 247
Query: 597 AALDGP--CPE--NELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQN 639
LD P CPE +L+R +C RPT ++V+ L+ +
Sbjct: 248 --LDQPDNCPERVTDLMR------MCWQFNPKMRPTFLEIVNLLKDD 286
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 74/210 (35%), Gaps = 64/210 (30%)
Query: 420 NFSTTNKLGEGGFGPVYKGKL------LDGQVIAVKRLS--------------------- 452
N + LG G FG VY+G++ +AVK L
Sbjct: 31 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 90
Query: 453 --GRTIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQ----LNWSKRITIIEGIA 506
+R +G SL R ++ E M L F+ ++ + L + + IA
Sbjct: 91 NHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 150
Query: 507 QGLIYLHKYSRLRMNESKVNT-------NRV--VGTYG---------------------- 535
G YL + + + + N RV +G +G
Sbjct: 151 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 210
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+M PE M GI + K D +SFGVLL EI S
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 110/287 (38%), Gaps = 94/287 (32%)
Query: 426 KLGEGGFGPVYKG---KLLDGQV---IAVKRLS-----------------------GRTI 456
+LG+G FG VY+G ++ G+ +AVK ++ +
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 457 RLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKR--------ITIIEGIAQG 508
RL+G G ++V E M + L ++ S++ + N R I + IA G
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 509 LIYLHKYSRLRMNESKVNTNRV------VGTYG----------------------YMAPE 540
+ YL+ + + + N +G +G +MAPE
Sbjct: 143 MAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPE 202
Query: 541 YAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLV---GYLWKEGKASELME 596
+G+ + +D++SFGV+L EI S + E+ L V GY
Sbjct: 203 SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY------------ 250
Query: 597 AALDGP--CPE--NELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQN 639
LD P CPE +L+R +C RPT ++V+ L+ +
Sbjct: 251 --LDQPDNCPERVTDLMR------MCWQFNPKMRPTFLEIVNLLKDD 289
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 74/210 (35%), Gaps = 64/210 (30%)
Query: 420 NFSTTNKLGEGGFGPVYKGKL------LDGQVIAVKRLS--------------------- 452
N + LG G FG VY+G++ +AVK L
Sbjct: 32 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 91
Query: 453 --GRTIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQ----LNWSKRITIIEGIA 506
+R +G SL R ++ E M L F+ ++ + L + + IA
Sbjct: 92 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 151
Query: 507 QGLIYLHKYSRLRMNESKVNT-------NRV--VGTYG---------------------- 535
G YL + + + + N RV +G +G
Sbjct: 152 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 211
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+M PE M GI + K D +SFGVLL EI S
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 110/287 (38%), Gaps = 94/287 (32%)
Query: 426 KLGEGGFGPVYKG---KLLDGQV---IAVKRLS-----------------------GRTI 456
+LG+G FG VY+G ++ G+ +AVK ++ +
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 457 RLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKR--------ITIIEGIAQG 508
RL+G G ++V E M + L ++ S++ + N R I + IA G
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 509 LIYLHKYSRLRMNESKVNTNRV------VGTYG----------------------YMAPE 540
+ YL+ + + + N +G +G +MAPE
Sbjct: 143 MAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPE 202
Query: 541 YAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLV---GYLWKEGKASELME 596
+G+ + +D++SFGV+L EI S + E+ L V GY
Sbjct: 203 SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY------------ 250
Query: 597 AALDGP--CPE--NELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQN 639
LD P CPE +L+R +C RPT ++V+ L+ +
Sbjct: 251 --LDQPDNCPERVTDLMR------MCWQFNPKMRPTFLEIVNLLKDD 289
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 74/210 (35%), Gaps = 64/210 (30%)
Query: 420 NFSTTNKLGEGGFGPVYKGKL------LDGQVIAVKRLS--------------------- 452
N + LG G FG VY+G++ +AVK L
Sbjct: 46 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 105
Query: 453 --GRTIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQ----LNWSKRITIIEGIA 506
+R +G SL R ++ E M L F+ ++ + L + + IA
Sbjct: 106 NHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 507 QGLIYLHKYSRLRMNESKVNT-------NRV--VGTYG---------------------- 535
G YL + + + + N RV +G +G
Sbjct: 166 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+M PE M GI + K D +SFGVLL EI S
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 74/211 (35%), Gaps = 64/211 (30%)
Query: 419 NNFSTTNKLGEGGFGPVYKGKL------LDGQVIAVKRLS-------------------- 452
N + LG G FG VY+G++ +AVK L
Sbjct: 22 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 81
Query: 453 ---GRTIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQ----LNWSKRITIIEGI 505
+R +G SL R ++ E M L F+ ++ + L + + I
Sbjct: 82 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 141
Query: 506 AQGLIYLHKYSRLRMNESKVNT-------NRV--VGTYG--------------------- 535
A G YL + + + + N RV +G +G
Sbjct: 142 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 201
Query: 536 -YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+M PE M GI + K D +SFGVLL EI S
Sbjct: 202 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 96/283 (33%), Gaps = 82/283 (28%)
Query: 425 NKLGEGGFGPVYKGKLL------DGQVIAVKRLSGR-----------------------T 455
+LGE FG VYKG L Q +A+K L +
Sbjct: 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 91
Query: 456 IRLMGCSLHGAERILVYEFMPNKSLDFFIF-------------DSVKKKQLNWSKRITII 502
+ L+G +++ + + L F+ D K L + ++
Sbjct: 92 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 151
Query: 503 EGIAQGLIYL------HK---------YSRLRMNESKVNTNRVVGTYGY----------- 536
IA G+ YL HK Y +L + S + R V Y
Sbjct: 152 AQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPI 211
Query: 537 --MAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASEL 594
MAPE M G S+ +D++S+GV+L E+ S C GY E+
Sbjct: 212 RWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYC----------GY--SNQDVVEM 259
Query: 595 MEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLR 637
+ PCP++ + C ++ RP D+ S LR
Sbjct: 260 IRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 302
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 96/283 (33%), Gaps = 82/283 (28%)
Query: 425 NKLGEGGFGPVYKGKLL------DGQVIAVKRLSGR-----------------------T 455
+LGE FG VYKG L Q +A+K L +
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 456 IRLMGCSLHGAERILVYEFMPNKSLDFFIF-------------DSVKKKQLNWSKRITII 502
+ L+G +++ + + L F+ D K L + ++
Sbjct: 75 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134
Query: 503 EGIAQGLIYL------HK---------YSRLRMNESKVNTNRVVGTYGY----------- 536
IA G+ YL HK Y +L + S + R V Y
Sbjct: 135 AQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPI 194
Query: 537 --MAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASEL 594
MAPE M G S+ +D++S+GV+L E+ S C GY E+
Sbjct: 195 RWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYC----------GY--SNQDVVEM 242
Query: 595 MEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLR 637
+ PCP++ + C ++ RP D+ S LR
Sbjct: 243 IRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 285
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 74/211 (35%), Gaps = 64/211 (30%)
Query: 419 NNFSTTNKLGEGGFGPVYKGKL------LDGQVIAVKRLS-------------------- 452
N + LG G FG VY+G++ +AVK L
Sbjct: 47 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 106
Query: 453 ---GRTIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQ----LNWSKRITIIEGI 505
+R +G SL R ++ E M L F+ ++ + L + + I
Sbjct: 107 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 166
Query: 506 AQGLIYLHKYSRLRMNESKVNT-------NRV--VGTYG--------------------- 535
A G YL + + + + N RV +G +G
Sbjct: 167 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 226
Query: 536 -YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+M PE M GI + K D +SFGVLL EI S
Sbjct: 227 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 74/211 (35%), Gaps = 64/211 (30%)
Query: 419 NNFSTTNKLGEGGFGPVYKGKL------LDGQVIAVKRLS-------------------- 452
N + LG G FG VY+G++ +AVK L
Sbjct: 48 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 107
Query: 453 ---GRTIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQ----LNWSKRITIIEGI 505
+R +G SL R ++ E M L F+ ++ + L + + I
Sbjct: 108 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 167
Query: 506 AQGLIYLHKYSRLRMNESKVNT-------NRV--VGTYG--------------------- 535
A G YL + + + + N RV +G +G
Sbjct: 168 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPV 227
Query: 536 -YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+M PE M GI + K D +SFGVLL EI S
Sbjct: 228 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 74/210 (35%), Gaps = 64/210 (30%)
Query: 420 NFSTTNKLGEGGFGPVYKGKL------LDGQVIAVKRLS--------------------- 452
N + LG G FG VY+G++ +AVK L
Sbjct: 72 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 131
Query: 453 --GRTIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQ----LNWSKRITIIEGIA 506
+R +G SL R ++ E M L F+ ++ + L + + IA
Sbjct: 132 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 191
Query: 507 QGLIYLHKYSRLRMNESKVNT-------NRV--VGTYG---------------------- 535
G YL + + + + N RV +G +G
Sbjct: 192 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK 251
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+M PE M GI + K D +SFGVLL EI S
Sbjct: 252 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 17/115 (14%)
Query: 532 GTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKA 591
G+ +MAPE S K DVFS+G++L E+++ RK P + +G G A
Sbjct: 166 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK---------PFDEIG-----GPA 211
Query: 592 SELMEAALDGPCPE--NELLRCIHAGLL-CVHDQAVNRPTMADVVSCLRQNNQHF 643
+M A +G P L + I + + C RP+M ++V + ++F
Sbjct: 212 FRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 266
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 74/211 (35%), Gaps = 64/211 (30%)
Query: 419 NNFSTTNKLGEGGFGPVYKGKL------LDGQVIAVKRLS-------------------- 452
N + LG G FG VY+G++ +AVK L
Sbjct: 57 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 116
Query: 453 ---GRTIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQ----LNWSKRITIIEGI 505
+R +G SL R ++ E M L F+ ++ + L + + I
Sbjct: 117 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 176
Query: 506 AQGLIYLHKYSRLRMNESKVNT-------NRV--VGTYG--------------------- 535
A G YL + + + + N RV +G +G
Sbjct: 177 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 236
Query: 536 -YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+M PE M GI + K D +SFGVLL EI S
Sbjct: 237 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 74/210 (35%), Gaps = 64/210 (30%)
Query: 420 NFSTTNKLGEGGFGPVYKGKL------LDGQVIAVKRLS--------------------- 452
N + LG G FG VY+G++ +AVK L
Sbjct: 46 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKF 105
Query: 453 --GRTIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQ----LNWSKRITIIEGIA 506
+R +G SL R ++ E M L F+ ++ + L + + IA
Sbjct: 106 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 507 QGLIYLHKYSRLRMNESKVNT-------NRV--VGTYG---------------------- 535
G YL + + + + N RV +G +G
Sbjct: 166 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+M PE M GI + K D +SFGVLL EI S
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 74/211 (35%), Gaps = 64/211 (30%)
Query: 419 NNFSTTNKLGEGGFGPVYKGKL------LDGQVIAVKRLS-------------------- 452
N + LG G FG VY+G++ +AVK L
Sbjct: 37 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 96
Query: 453 ---GRTIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQ----LNWSKRITIIEGI 505
+R +G SL R ++ E M L F+ ++ + L + + I
Sbjct: 97 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 156
Query: 506 AQGLIYLHKYSRLRMNESKVNT-------NRV--VGTYG--------------------- 535
A G YL + + + + N RV +G +G
Sbjct: 157 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 216
Query: 536 -YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+M PE M GI + K D +SFGVLL EI S
Sbjct: 217 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 17/115 (14%)
Query: 532 GTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKA 591
G+ +MAPE S K DVFS+G++L E+++ RK P + +G G A
Sbjct: 165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK---------PFDEIG-----GPA 210
Query: 592 SELMEAALDGPCPE--NELLRCIHAGLL-CVHDQAVNRPTMADVVSCLRQNNQHF 643
+M A +G P L + I + + C RP+M ++V + ++F
Sbjct: 211 FRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 265
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 109/287 (37%), Gaps = 94/287 (32%)
Query: 426 KLGEGGFGPVYKGKLLD---GQV---IAVKRLS-----------------------GRTI 456
+LG+G FG VY+G D G+ +AVK ++ +
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 457 RLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKR--------ITIIEGIAQG 508
RL+G G ++V E M + L ++ S++ + N R I + IA G
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 509 LIYLHKYSRLRMNESKVNTNRV------VGTYG----------------------YMAPE 540
+ YL+ + + + N +G +G +MAPE
Sbjct: 143 MAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPE 202
Query: 541 YAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLV---GYLWKEGKASELME 596
+G+ + +D++SFGV+L EI S + E+ L V GY
Sbjct: 203 SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY------------ 250
Query: 597 AALDGP--CPE--NELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQN 639
LD P CPE +L+R +C RPT ++V+ L+ +
Sbjct: 251 --LDQPDNCPERVTDLMR------MCWQFNPNMRPTFLEIVNLLKDD 289
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 108/286 (37%), Gaps = 81/286 (28%)
Query: 427 LGEGGFG--------PVYKGKLLDGQVIAVKRLSG-----------------RT------ 455
LGEG FG P G G+++AVK L RT
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 456 IRLMGCSLHGAERIL--VYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLH 513
I+ GC E+ L V E++P SL D + + + ++ + + I +G+ YLH
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLR----DYLPRHSIGLAQLLLFAQQICEGMAYLH 134
Query: 514 KYSRLRMNESKVNT----NRVV--GTYG-----------------------YMAPEYAMN 544
+ N + N +R+V G +G + APE
Sbjct: 135 SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 194
Query: 545 GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERP----LNLVGYLWKEG---KASELMEA 597
+DV+SFGV L E+++ +C + P L L+G + + +EL+E
Sbjct: 195 YKFYYASDVWSFGVTLYELLT-----HCDSSQSPPTKFLELIGIAQGQMTVLRLTELLER 249
Query: 598 ALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQHF 643
P P+ H C +A RPT +++ L+ ++ +
Sbjct: 250 GERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY 295
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 109/287 (37%), Gaps = 94/287 (32%)
Query: 426 KLGEGGFGPVYKGKLLD---GQV---IAVKRLS-----------------------GRTI 456
+LG+G FG VY+G D G+ +AVK ++ +
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 457 RLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKR--------ITIIEGIAQG 508
RL+G G ++V E M + L ++ S++ + N R I + IA G
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 509 LIYLHKYSRLRMNESKVNTNRV------VGTYG----------------------YMAPE 540
+ YL+ + + + N +G +G +MAPE
Sbjct: 142 MAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPE 201
Query: 541 YAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLV---GYLWKEGKASELME 596
+G+ + +D++SFGV+L EI S + E+ L V GY
Sbjct: 202 SLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY------------ 249
Query: 597 AALDGP--CPE--NELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQN 639
LD P CPE +L+R +C RPT ++V+ L+ +
Sbjct: 250 --LDQPDNCPERVTDLMR------MCWQFNPKMRPTFLEIVNLLKDD 288
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 108/286 (37%), Gaps = 81/286 (28%)
Query: 427 LGEGGFG--------PVYKGKLLDGQVIAVKRLSG-----------------RT------ 455
LGEG FG P G G+++AVK L RT
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 456 IRLMGCSLHGAERIL--VYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLH 513
I+ GC E+ L V E++P SL D + + + ++ + + I +G+ YLH
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLR----DYLPRHSIGLAQLLLFAQQICEGMAYLH 134
Query: 514 KYSRLRMNESKVNT----NRVV--GTYG-----------------------YMAPEYAMN 544
+ N + N +R+V G +G + APE
Sbjct: 135 AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 194
Query: 545 GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERP----LNLVGYLWKEG---KASELMEA 597
+DV+SFGV L E+++ +C + P L L+G + + +EL+E
Sbjct: 195 YKFYYASDVWSFGVTLYELLT-----HCDSSQSPPTKFLELIGIAQGQMTVLRLTELLER 249
Query: 598 ALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQHF 643
P P+ H C +A RPT +++ L+ ++ +
Sbjct: 250 GERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY 295
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 83/213 (38%), Gaps = 66/213 (30%)
Query: 419 NNFSTTNKLGEGGFGPVYKGKLL------DGQVIAVKRLSGRT----------------- 455
+N +LGEG FG V+ + D ++AVK L +
Sbjct: 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL 72
Query: 456 -----IRLMGCSLHGAERILVYEFMPNKSLDFFIF----DSV------KKKQLNWSKRIT 500
++ G + G I+V+E+M + L+ F+ D+V +L S+ +
Sbjct: 73 QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLH 132
Query: 501 IIEGIAQGLIYL---HKYSR-LRMNESKVNTNRVV--GTYG------------------- 535
I + IA G++YL H R L V N +V G +G
Sbjct: 133 IAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTML 192
Query: 536 ---YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+M PE M + ++DV+S GV+L EI +
Sbjct: 193 PIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 523 SKVNTNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSG 566
S T V+GT Y++PE A V ++DV+S G +L E+++G
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 523 SKVNTNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSG 566
S T V+GT Y++PE A V ++DV+S G +L E+++G
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 523 SKVNTNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSG 566
S T V+GT Y++PE A V ++DV+S G +L E+++G
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 86/242 (35%), Gaps = 77/242 (31%)
Query: 424 TNKLGEGGFGPVYKGKLLDGQVIAVKRLSGRT---------------------IRLMGCS 462
+LG G FG V+ G + +AVK L T +RL
Sbjct: 18 VKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVV 77
Query: 463 LHGAERILVYEFMPNKS-LDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMN 521
++ E+M S LDF D K L K I IA+G+ Y+ + + + +
Sbjct: 78 TREEPIYIITEYMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIERKNYIHRD 135
Query: 522 ESKVNT---------------NRVVGTYGY------------MAPEYAMNGIVSMKADVF 554
N RV+ Y APE G ++K+DV+
Sbjct: 136 LRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVW 195
Query: 555 SFGVLLLEIVS-------GRKN----------------NNCYDEERPLNLVGYLWKEGKA 591
SFG+LL EIV+ GR N NC DE +++ WKE KA
Sbjct: 196 SFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVENCPDE--LYDIMKMCWKE-KA 252
Query: 592 SE 593
E
Sbjct: 253 EE 254
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 523 SKVNTNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSG 566
S T V+GT Y++PE A V ++DV+S G +L E+++G
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 78/188 (41%), Gaps = 50/188 (26%)
Query: 426 KLGEGGFGPVYKGKLLDGQVIAVKRLSGRTI---------RLMGCSLH----------GA 466
KLG+G FG V+ G +A+K L T+ ++M H
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 333
Query: 467 ERI-LVYEFMPNKSL-DFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK----YSRLRM 520
E I +V E+M SL DF ++ K L + + + IA G+ Y+ + + LR
Sbjct: 334 EPIYIVTEYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 391
Query: 521 NESKVNTNRV--VGTYG---------------------YMAPEYAMNGIVSMKADVFSFG 557
V N V V +G + APE A+ G ++K+DV+SFG
Sbjct: 392 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 451
Query: 558 VLLLEIVS 565
+LL E+ +
Sbjct: 452 ILLTELTT 459
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 73/191 (38%), Gaps = 52/191 (27%)
Query: 424 TNKLGEGGFGPVYKGKLLDGQVIAVKRLS---------------------GRTIRLMGCS 462
+LG G FG V+ G +AVK L R +RL
Sbjct: 26 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 85
Query: 463 LHGAERILVYEFMPNKSL-DFFIFDSVKKKQLNWSKRITIIEGIAQGLI------YLHKY 515
I+ E+M N SL DF S K +N K + + IA+G+ Y+H+
Sbjct: 86 TQEPIYIIT-EYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERNYIHRD 142
Query: 516 SR-------------------LRMNESKVNTNRVVGTY--GYMAPEYAMNGIVSMKADVF 554
R R+ E T R + + APE G ++K+DV+
Sbjct: 143 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 202
Query: 555 SFGVLLLEIVS 565
SFG+LL EIV+
Sbjct: 203 SFGILLTEIVT 213
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 73/191 (38%), Gaps = 52/191 (27%)
Query: 424 TNKLGEGGFGPVYKGKLLDGQVIAVKRLS---------------------GRTIRLMGCS 462
+LG G FG V+ G +AVK L R +RL
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 463 LHGAERILVYEFMPNKSL-DFFIFDSVKKKQLNWSKRITIIEGIAQGLI------YLHKY 515
I+ E+M N SL DF S K +N K + + IA+G+ Y+H+
Sbjct: 84 TQEPIYIIT-EYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERNYIHRD 140
Query: 516 SR-------------------LRMNESKVNTNRVVGTY--GYMAPEYAMNGIVSMKADVF 554
R R+ E T R + + APE G ++K+DV+
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 200
Query: 555 SFGVLLLEIVS 565
SFG+LL EIV+
Sbjct: 201 SFGILLTEIVT 211
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 82/209 (39%), Gaps = 52/209 (24%)
Query: 409 FNFQTIAAATNNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRLSGRTIRL--------- 458
F + A ++ + LG+G FG V K + GQ AVK +S R ++
Sbjct: 22 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 81
Query: 459 ---MGCSLHGAERILVYEFMPNKSLDFFI---------FDSV-KKKQLNWSKRITIIEGI 505
+ L + +YEF +K + + FD + +K+ + II +
Sbjct: 82 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV 141
Query: 506 AQGLIYLHKYSRLRMN--------ESKVNTNRV--------------------VGTYGYM 537
G+ Y+HK + + ESK + +GT Y+
Sbjct: 142 LSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYI 201
Query: 538 APEYAMNGIVSMKADVFSFGVLLLEIVSG 566
APE ++G K DV+S GV+L ++SG
Sbjct: 202 APE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 523 SKVNTNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSG 566
S T V+GT Y++PE A V ++DV+S G +L E+++G
Sbjct: 189 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 232
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 523 SKVNTNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSG 566
S T V+GT Y++PE A V ++DV+S G +L E+++G
Sbjct: 172 SVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 85/218 (38%), Gaps = 53/218 (24%)
Query: 401 DMKHELKGFNFQ-TIAAATNNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRLSGRTIRL 458
D H G Q + A ++ + LG+G FG V K + GQ AVK +S R ++
Sbjct: 7 DHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ 66
Query: 459 ------------MGCSLHGAERILVYEFMPNKSLDFFI---------FDSV-KKKQLNWS 496
+ L + +YEF +K + + FD + +K+ +
Sbjct: 67 KTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV 126
Query: 497 KRITIIEGIAQGLIYLHKYSRLRMN--------ESKVNTNRV------------------ 530
II + G+ Y+HK + + ESK +
Sbjct: 127 DAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMK 186
Query: 531 --VGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSG 566
+GT Y+APE ++G K DV+S GV+L ++SG
Sbjct: 187 DKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 73/191 (38%), Gaps = 52/191 (27%)
Query: 424 TNKLGEGGFGPVYKGKLLDGQVIAVKRLS---------------------GRTIRLMGCS 462
+LG G FG V+ G +AVK L R +RL
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 463 LHGAERILVYEFMPNKSL-DFFIFDSVKKKQLNWSKRITIIEGIAQGLI------YLHKY 515
I+ E+M N SL DF S K +N K + + IA+G+ Y+H+
Sbjct: 78 TQEPIYIIT-EYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 516 SR-------------------LRMNESKVNTNRVVGTY--GYMAPEYAMNGIVSMKADVF 554
R R+ E T R + + APE G ++K+DV+
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 555 SFGVLLLEIVS 565
SFG+LL EIV+
Sbjct: 195 SFGILLTEIVT 205
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 73/191 (38%), Gaps = 52/191 (27%)
Query: 424 TNKLGEGGFGPVYKGKLLDGQVIAVKRLS---------------------GRTIRLMGCS 462
+LG G FG V+ G +AVK L R +RL
Sbjct: 27 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 86
Query: 463 LHGAERILVYEFMPNKSL-DFFIFDSVKKKQLNWSKRITIIEGIAQGLI------YLHKY 515
I+ E+M N SL DF S K +N K + + IA+G+ Y+H+
Sbjct: 87 TQEPIYIIT-EYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERNYIHRD 143
Query: 516 SR-------------------LRMNESKVNTNRVVGTY--GYMAPEYAMNGIVSMKADVF 554
R R+ E T R + + APE G ++K+DV+
Sbjct: 144 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 203
Query: 555 SFGVLLLEIVS 565
SFG+LL EIV+
Sbjct: 204 SFGILLTEIVT 214
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 82/209 (39%), Gaps = 52/209 (24%)
Query: 409 FNFQTIAAATNNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRLSGRTIRL--------- 458
F + A ++ + LG+G FG V K + GQ AVK +S R ++
Sbjct: 39 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 98
Query: 459 ---MGCSLHGAERILVYEFMPNKSLDFFI---------FDSV-KKKQLNWSKRITIIEGI 505
+ L + +YEF +K + + FD + +K+ + II +
Sbjct: 99 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV 158
Query: 506 AQGLIYLHKYSRLRMN--------ESKVNTNRV--------------------VGTYGYM 537
G+ Y+HK + + ESK + +GT Y+
Sbjct: 159 LSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYI 218
Query: 538 APEYAMNGIVSMKADVFSFGVLLLEIVSG 566
APE ++G K DV+S GV+L ++SG
Sbjct: 219 APE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 73/191 (38%), Gaps = 52/191 (27%)
Query: 424 TNKLGEGGFGPVYKGKLLDGQVIAVKRLS---------------------GRTIRLMGCS 462
+LG G FG V+ G +AVK L R +RL
Sbjct: 19 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 78
Query: 463 LHGAERILVYEFMPNKSL-DFFIFDSVKKKQLNWSKRITIIEGIAQGLI------YLHKY 515
I+ E+M N SL DF S K +N K + + IA+G+ Y+H+
Sbjct: 79 TQEPIYIIT-EYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERNYIHRD 135
Query: 516 SR-------------------LRMNESKVNTNRVVGTY--GYMAPEYAMNGIVSMKADVF 554
R R+ E T R + + APE G ++K+DV+
Sbjct: 136 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 195
Query: 555 SFGVLLLEIVS 565
SFG+LL EIV+
Sbjct: 196 SFGILLTEIVT 206
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 78/188 (41%), Gaps = 50/188 (26%)
Query: 426 KLGEGGFGPVYKGKLLDGQVIAVKRLSGRTI---------RLMGCSLH----------GA 466
KLG+G FG V+ G +A+K L T+ ++M H
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 467 ERI-LVYEFMPNKSL-DFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK----YSRLRM 520
E I +V E+M SL DF ++ K L + + + IA G+ Y+ + + LR
Sbjct: 251 EPIYIVTEYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 308
Query: 521 NESKVNTNRV--VGTYG---------------------YMAPEYAMNGIVSMKADVFSFG 557
V N V V +G + APE A+ G ++K+DV+SFG
Sbjct: 309 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 368
Query: 558 VLLLEIVS 565
+LL E+ +
Sbjct: 369 ILLTELTT 376
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 112/298 (37%), Gaps = 92/298 (30%)
Query: 416 AATNNFSTTNKLGEGGFGPVYKGKLLDGQV-------IAVKRLSG--------------- 453
A + + +LG+G FG VY+G + G V +A+K ++
Sbjct: 9 VAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 67
Query: 454 --------RTIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLN--------WSK 497
+RL+G G +++ E M L ++ S++ + N SK
Sbjct: 68 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSK 126
Query: 498 RITIIEGIAQGLIYL------HKYSRLRMNESKVNTNRVVGTYG---------------- 535
I + IA G+ YL H+ R + +G +G
Sbjct: 127 MIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGK 186
Query: 536 ------YMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKE 588
+M+PE +G+ + +DV+SFGV+L EI + + E+ L V
Sbjct: 187 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV------ 240
Query: 589 GKASELMEAA-LDGP--CPEN--ELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQ 641
ME LD P CP+ EL+R +C RP+ +++S +++ +
Sbjct: 241 ------MEGGLLDKPDNCPDMLLELMR------MCWQYNPKMRPSFLEIISSIKEEME 286
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/206 (18%), Positives = 77/206 (37%), Gaps = 54/206 (26%)
Query: 414 IAAATNNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSGRTIRLMG------------ 460
I +F N LG+G F VY+ + + G +A+K + + + G
Sbjct: 6 IGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIH 65
Query: 461 CSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLN--WSKRIT---------IIEGIAQGL 509
C L + +Y + + + + + + ++N R+ + I G+
Sbjct: 66 CQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGM 125
Query: 510 IYLHKY----------------------------SRLRMNESKVNTNRVVGTYGYMAPEY 541
+YLH + ++L+M K T + GT Y++PE
Sbjct: 126 LYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPEI 183
Query: 542 AMNGIVSMKADVFSFGVLLLEIVSGR 567
A +++DV+S G + ++ GR
Sbjct: 184 ATRSAHGLESDVWSLGCMFYTLLIGR 209
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 73/191 (38%), Gaps = 52/191 (27%)
Query: 424 TNKLGEGGFGPVYKGKLLDGQVIAVKRLS---------------------GRTIRLMGCS 462
+LG G FG V+ G +AVK L R +RL
Sbjct: 20 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 79
Query: 463 LHGAERILVYEFMPNKSL-DFFIFDSVKKKQLNWSKRITIIEGIAQGLI------YLHKY 515
I+ E+M N SL DF S K +N K + + IA+G+ Y+H+
Sbjct: 80 TQEPIYIIT-EYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERNYIHRD 136
Query: 516 SR-------------------LRMNESKVNTNRVVGTY--GYMAPEYAMNGIVSMKADVF 554
R R+ E T R + + APE G ++K+DV+
Sbjct: 137 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 196
Query: 555 SFGVLLLEIVS 565
SFG+LL EIV+
Sbjct: 197 SFGILLTEIVT 207
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 85/218 (38%), Gaps = 53/218 (24%)
Query: 401 DMKHELKGFNFQ-TIAAATNNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRLSGRTIRL 458
D H G Q + A ++ + LG+G FG V K + GQ AVK +S R ++
Sbjct: 31 DHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ 90
Query: 459 ------------MGCSLHGAERILVYEFMPNKSLDFFI---------FDSV-KKKQLNWS 496
+ L + +YEF +K + + FD + +K+ +
Sbjct: 91 KTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV 150
Query: 497 KRITIIEGIAQGLIYLHKYSRLRMN--------ESKVNTNRV------------------ 530
II + G+ Y+HK + + ESK +
Sbjct: 151 DAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMK 210
Query: 531 --VGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSG 566
+GT Y+APE ++G K DV+S GV+L ++SG
Sbjct: 211 DKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 86/242 (35%), Gaps = 77/242 (31%)
Query: 424 TNKLGEGGFGPVYKGKLLDGQVIAVKRLSGRT---------------------IRLMGCS 462
KLG G FG V+ G + +AVK L T +RL
Sbjct: 17 VKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVV 76
Query: 463 LHGAERILVYEFMPNKS-LDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMN 521
++ EFM S LDF D K L K I IA+G+ Y+ + + + +
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIERKNYIHRD 134
Query: 522 ESKVNT---------------NRVVGTYGY------------MAPEYAMNGIVSMKADVF 554
N RV+ Y APE G ++K++V+
Sbjct: 135 LRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVW 194
Query: 555 SFGVLLLEIVS-------GRKN----------------NNCYDEERPLNLVGYLWKEGKA 591
SFG+LL EIV+ GR N NC DE +++ WKE KA
Sbjct: 195 SFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENCPDE--LYDIMKMCWKE-KA 251
Query: 592 SE 593
E
Sbjct: 252 EE 253
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 73/191 (38%), Gaps = 52/191 (27%)
Query: 424 TNKLGEGGFGPVYKGKLLDGQVIAVKRLS---------------------GRTIRLMGCS 462
+LG G FG V+ G +AVK L R +RL
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 463 LHGAERILVYEFMPNKSL-DFFIFDSVKKKQLNWSKRITIIEGIAQGLI------YLHKY 515
I+ E+M N SL DF S K +N K + + IA+G+ Y+H+
Sbjct: 78 TQEPIYIIT-EYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 516 SR-------------------LRMNESKVNTNRVVGTY--GYMAPEYAMNGIVSMKADVF 554
R R+ E T R + + APE G ++K+DV+
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 555 SFGVLLLEIVS 565
SFG+LL EIV+
Sbjct: 195 SFGILLTEIVT 205
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 78/188 (41%), Gaps = 50/188 (26%)
Query: 426 KLGEGGFGPVYKGKLLDGQVIAVKRLSGRTI---------RLMGCSLH----------GA 466
KLG+G FG V+ G +A+K L T+ ++M H
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 467 ERI-LVYEFMPNKSL-DFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK----YSRLRM 520
E I +V E+M SL DF ++ K L + + + IA G+ Y+ + + LR
Sbjct: 251 EPIYIVTEYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 308
Query: 521 NESKVNTNRV--VGTYG---------------------YMAPEYAMNGIVSMKADVFSFG 557
V N V V +G + APE A+ G ++K+DV+SFG
Sbjct: 309 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 368
Query: 558 VLLLEIVS 565
+LL E+ +
Sbjct: 369 ILLTELTT 376
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 73/191 (38%), Gaps = 52/191 (27%)
Query: 424 TNKLGEGGFGPVYKGKLLDGQVIAVKRLSG---------------------RTIRLMGCS 462
+LG G FG V+ G +AVK L R +RL
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 463 LHGAERILVYEFMPNKSL-DFFIFDSVKKKQLNWSKRITIIEGIAQGLI------YLHKY 515
I+ E+M N SL DF S K +N K + + IA+G+ Y+H+
Sbjct: 84 TQEPIYIIT-EYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERNYIHRD 140
Query: 516 SRL-------------------RMNESKVNTNRVVGTY--GYMAPEYAMNGIVSMKADVF 554
R R+ E T R + + APE G ++K+DV+
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 200
Query: 555 SFGVLLLEIVS 565
SFG+LL EIV+
Sbjct: 201 SFGILLTEIVT 211
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 73/191 (38%), Gaps = 52/191 (27%)
Query: 424 TNKLGEGGFGPVYKGKLLDGQVIAVKRLSG---------------------RTIRLMGCS 462
+LG G FG V+ G +AVK L R +RL
Sbjct: 28 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 87
Query: 463 LHGAERILVYEFMPNKSL-DFFIFDSVKKKQLNWSKRITIIEGIAQGLI------YLHKY 515
I+ E+M N SL DF S K +N K + + IA+G+ Y+H+
Sbjct: 88 TQEPIYIIT-EYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERNYIHRD 144
Query: 516 SRL-------------------RMNESKVNTNRVVGTY--GYMAPEYAMNGIVSMKADVF 554
R R+ E T R + + APE G ++K+DV+
Sbjct: 145 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 204
Query: 555 SFGVLLLEIVS 565
SFG+LL EIV+
Sbjct: 205 SFGILLTEIVT 215
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 73/191 (38%), Gaps = 52/191 (27%)
Query: 424 TNKLGEGGFGPVYKGKLLDGQVIAVKRLSG---------------------RTIRLMGCS 462
+LG G FG V+ G +AVK L R +RL
Sbjct: 23 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 82
Query: 463 LHGAERILVYEFMPNKSL-DFFIFDSVKKKQLNWSKRITIIEGIAQGLI------YLHKY 515
I+ E+M N SL DF S K +N K + + IA+G+ Y+H+
Sbjct: 83 TQEPIYIIT-EYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERNYIHRD 139
Query: 516 SRL-------------------RMNESKVNTNRVVGTY--GYMAPEYAMNGIVSMKADVF 554
R R+ E T R + + APE G ++K+DV+
Sbjct: 140 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 199
Query: 555 SFGVLLLEIVS 565
SFG+LL EIV+
Sbjct: 200 SFGILLTEIVT 210
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 112/298 (37%), Gaps = 92/298 (30%)
Query: 416 AATNNFSTTNKLGEGGFGPVYKGKLLDGQV-------IAVKRLSG--------------- 453
A + + +LG+G FG VY+G + G V +A+K ++
Sbjct: 9 VAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 67
Query: 454 --------RTIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLN--------WSK 497
+RL+G G +++ E M L ++ S++ + N SK
Sbjct: 68 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSK 126
Query: 498 RITIIEGIAQGLIYL------HKYSRLRMNESKVNTNRVVGTYG---------------- 535
I + IA G+ YL H+ R + +G +G
Sbjct: 127 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 186
Query: 536 ------YMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKE 588
+M+PE +G+ + +DV+SFGV+L EI + + E+ L V
Sbjct: 187 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV------ 240
Query: 589 GKASELMEAA-LDGP--CPEN--ELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQ 641
ME LD P CP+ EL+R +C RP+ +++S +++ +
Sbjct: 241 ------MEGGLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEEME 286
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 112/298 (37%), Gaps = 92/298 (30%)
Query: 416 AATNNFSTTNKLGEGGFGPVYKGKLLDGQV-------IAVKRLSG--------------- 453
A + + +LG+G FG VY+G + G V +A+K ++
Sbjct: 16 VAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 74
Query: 454 --------RTIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLN--------WSK 497
+RL+G G +++ E M L ++ S++ + N SK
Sbjct: 75 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSK 133
Query: 498 RITIIEGIAQGLIYL------HKYSRLRMNESKVNTNRVVGTYG---------------- 535
I + IA G+ YL H+ R + +G +G
Sbjct: 134 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGK 193
Query: 536 ------YMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKE 588
+M+PE +G+ + +DV+SFGV+L EI + + E+ L V
Sbjct: 194 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV------ 247
Query: 589 GKASELMEAA-LDGP--CPEN--ELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQ 641
ME LD P CP+ EL+R +C RP+ +++S +++ +
Sbjct: 248 ------MEGGLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEEME 293
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 111/297 (37%), Gaps = 90/297 (30%)
Query: 416 AATNNFSTTNKLGEGGFGPVYKGKLLDGQV-------IAVKRLSG--------------- 453
A + + +LG+G FG VY+G + G V +A+K ++
Sbjct: 12 VAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 70
Query: 454 --------RTIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLN--------WSK 497
+RL+G G +++ E M L ++ S++ N SK
Sbjct: 71 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPAMANNPVLAPPSLSK 129
Query: 498 RITIIEGIAQGLIYL------HKYSRLRMNESKVNTNRVVGTYG---------------- 535
I + IA G+ YL H+ R + +G +G
Sbjct: 130 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 189
Query: 536 ------YMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKE 588
+M+PE +G+ + +DV+SFGV+L EI + + E+ L V E
Sbjct: 190 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV----ME 245
Query: 589 GKASELMEAALDGP--CPEN--ELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQ 641
G LD P CP+ EL+R +C RP+ +++S +++ +
Sbjct: 246 G-------GLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEEME 289
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 86/227 (37%), Gaps = 71/227 (31%)
Query: 408 GFNFQTIAAATNNFSTTNKLGEGGFGPVYKGKLL------DGQVIAVKRLSGRT------ 455
G + Q I + +LGEG FG V+ + D ++AVK L T
Sbjct: 6 GIHVQHIK--RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKD 63
Query: 456 ----------------IRLMGCSLHGAERILVYEFMPNKSLDFFIF----DSV------- 488
++ G G I+V+E+M + L+ F+ D++
Sbjct: 64 FQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQP 123
Query: 489 --KKKQLNWSKRITIIEGIAQGLIYL---HKYSR-LRMNESKVNTNRVV--GTYG----- 535
K +L S+ + I IA G++YL H R L V N +V G +G
Sbjct: 124 RQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDV 183
Query: 536 -----------------YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+M PE M + ++DV+SFGV+L EI +
Sbjct: 184 YSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 112/297 (37%), Gaps = 90/297 (30%)
Query: 416 AATNNFSTTNKLGEGGFGPVYKGKLLDGQV-------IAVKRLSG--------------- 453
A + + +LG+G FG VY+G + G V +A+K ++
Sbjct: 15 VAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 73
Query: 454 --------RTIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLN--------WSK 497
+RL+G G +++ E M L ++ S++ + N SK
Sbjct: 74 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSK 132
Query: 498 RITIIEGIAQGLIYL------HKYSRLRMNESKVNTNRVVGTYG---------------- 535
I + IA G+ YL H+ R + +G +G
Sbjct: 133 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 192
Query: 536 ------YMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKE 588
+M+PE +G+ + +DV+SFGV+L EI + + E+ L V E
Sbjct: 193 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV----ME 248
Query: 589 GKASELMEAALDGP--CPEN--ELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQ 641
G LD P CP+ EL+R +C RP+ +++S +++ +
Sbjct: 249 G-------GLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEEME 292
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 112/298 (37%), Gaps = 92/298 (30%)
Query: 416 AATNNFSTTNKLGEGGFGPVYKGKLLDGQV-------IAVKRLSG--------------- 453
A + + +LG+G FG VY+G + G V +A+K ++
Sbjct: 16 VAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 74
Query: 454 --------RTIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLN--------WSK 497
+RL+G G +++ E M L ++ S++ + N SK
Sbjct: 75 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSK 133
Query: 498 RITIIEGIAQGLIYL------HKYSRLRMNESKVNTNRVVGTYG---------------- 535
I + IA G+ YL H+ R + +G +G
Sbjct: 134 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 193
Query: 536 ------YMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKE 588
+M+PE +G+ + +DV+SFGV+L EI + + E+ L V
Sbjct: 194 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV------ 247
Query: 589 GKASELMEAA-LDGP--CPEN--ELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQ 641
ME LD P CP+ EL+R +C RP+ +++S +++ +
Sbjct: 248 ------MEGGLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEEME 293
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 112/297 (37%), Gaps = 90/297 (30%)
Query: 416 AATNNFSTTNKLGEGGFGPVYKGKLLDGQV-------IAVKRLSG--------------- 453
A + + +LG+G FG VY+G + G V +A+K ++
Sbjct: 22 VAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 80
Query: 454 --------RTIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLN--------WSK 497
+RL+G G +++ E M L ++ S++ + N SK
Sbjct: 81 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSK 139
Query: 498 RITIIEGIAQGLIYL------HKYSRLRMNESKVNTNRVVGTYG---------------- 535
I + IA G+ YL H+ R + +G +G
Sbjct: 140 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 199
Query: 536 ------YMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKE 588
+M+PE +G+ + +DV+SFGV+L EI + + E+ L V E
Sbjct: 200 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV----ME 255
Query: 589 GKASELMEAALDGP--CPEN--ELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQ 641
G LD P CP+ EL+R +C RP+ +++S +++ +
Sbjct: 256 G-------GLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEEME 299
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 111/297 (37%), Gaps = 90/297 (30%)
Query: 416 AATNNFSTTNKLGEGGFGPVYKGKLLDGQV-------IAVKRLSG--------------- 453
A + + +LG+G FG VY+G + G V +A+K ++
Sbjct: 22 VAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 80
Query: 454 --------RTIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLN--------WSK 497
+RL+G G +++ E M L ++ S++ N SK
Sbjct: 81 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPAMANNPVLAPPSLSK 139
Query: 498 RITIIEGIAQGLIYL------HKYSRLRMNESKVNTNRVVGTYG---------------- 535
I + IA G+ YL H+ R + +G +G
Sbjct: 140 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 199
Query: 536 ------YMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKE 588
+M+PE +G+ + +DV+SFGV+L EI + + E+ L V E
Sbjct: 200 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV----ME 255
Query: 589 GKASELMEAALDGP--CPEN--ELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQ 641
G LD P CP+ EL+R +C RP+ +++S +++ +
Sbjct: 256 G-------GLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEEME 299
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Query: 525 VNTNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEE------RP 578
TN GT Y+APE + + D +SFGVLL E++ G+ + DEE R
Sbjct: 174 AKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRM 233
Query: 579 LNLVGYLWKEGKASELM 595
N W E +A +L+
Sbjct: 234 DNPFYPRWLEKEAKDLL 250
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 112/297 (37%), Gaps = 90/297 (30%)
Query: 416 AATNNFSTTNKLGEGGFGPVYKGKLLDGQV-------IAVKRLSG--------------- 453
A + + +LG+G FG VY+G + G V +A+K ++
Sbjct: 13 VAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 71
Query: 454 --------RTIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLN--------WSK 497
+RL+G G +++ E M L ++ S++ + N SK
Sbjct: 72 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSK 130
Query: 498 RITIIEGIAQGLIYL------HKYSRLRMNESKVNTNRVVGTYG---------------- 535
I + IA G+ YL H+ R + +G +G
Sbjct: 131 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 190
Query: 536 ------YMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKE 588
+M+PE +G+ + +DV+SFGV+L EI + + E+ L V E
Sbjct: 191 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV----ME 246
Query: 589 GKASELMEAALDGP--CPEN--ELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQ 641
G LD P CP+ EL+R +C RP+ +++S +++ +
Sbjct: 247 G-------GLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEEME 290
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 73/191 (38%), Gaps = 52/191 (27%)
Query: 424 TNKLGEGGFGPVYKGKLLDGQVIAVKRLSG---------------------RTIRLMGCS 462
+LG G FG V+ G +AVK L R +RL
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 463 LHGAERILVYEFMPNKSL-DFFIFDSVKKKQLNWSKRITIIEGIAQGLI------YLHKY 515
I+ E+M N SL DF S K +N K + + IA+G+ Y+H+
Sbjct: 78 TQEPIYIIT-EYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 516 SRL-------------------RMNESKVNTNRVVGTY--GYMAPEYAMNGIVSMKADVF 554
R R+ E T R + + APE G ++K+DV+
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 555 SFGVLLLEIVS 565
SFG+LL EIV+
Sbjct: 195 SFGILLTEIVT 205
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 112/298 (37%), Gaps = 92/298 (30%)
Query: 416 AATNNFSTTNKLGEGGFGPVYKGKLLDGQV-------IAVKRLSG--------------- 453
A + + +LG+G FG VY+G + G V +A+K ++
Sbjct: 7 VAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 65
Query: 454 --------RTIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLN--------WSK 497
+RL+G G +++ E M L ++ S++ + N SK
Sbjct: 66 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSK 124
Query: 498 RITIIEGIAQGLIYL------HKYSRLRMNESKVNTNRVVGTYG---------------- 535
I + IA G+ YL H+ R + +G +G
Sbjct: 125 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGK 184
Query: 536 ------YMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKE 588
+M+PE +G+ + +DV+SFGV+L EI + + E+ L V
Sbjct: 185 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV------ 238
Query: 589 GKASELMEAA-LDGP--CPEN--ELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQ 641
ME LD P CP+ EL+R +C RP+ +++S +++ +
Sbjct: 239 ------MEGGLLDKPDNCPDMLLELMR------MCWQYNPKMRPSFLEIISSIKEEME 284
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 78/188 (41%), Gaps = 50/188 (26%)
Query: 426 KLGEGGFGPVYKGKLLDGQVIAVKRLSGRTI---------RLMGCSLH----------GA 466
KLG+G FG V+ G +A+K L T+ ++M H
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 467 ERI-LVYEFMPNKSL-DFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK----YSRLRM 520
E I +V E+M SL DF ++ K L + + + IA G+ Y+ + + LR
Sbjct: 75 EPIXIVTEYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 132
Query: 521 NESKVNTNRV--VGTYG---------------------YMAPEYAMNGIVSMKADVFSFG 557
V N V V +G + APE A+ G ++K+DV+SFG
Sbjct: 133 ANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 192
Query: 558 VLLLEIVS 565
+LL E+ +
Sbjct: 193 ILLTELTT 200
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 98/266 (36%), Gaps = 62/266 (23%)
Query: 419 NNFSTTNKLGEGGFGPVYKGKLLDGQVIAVKRLSGRTI---------RLMGCSLH----- 464
+ +LG G FG V+ G +A+K L T+ ++M H
Sbjct: 9 ESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQ 68
Query: 465 -----GAERI-LVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRL 518
E I +V E+M SL F+ D + + L + + +A G+ Y+ + + +
Sbjct: 69 LYAVVSEEPIYIVTEYMNKGSLLDFLKDG-EGRALKLPNLVDMAAQVAAGMAYIERMNYI 127
Query: 519 -------------------------RMNESKVNTNRVVGTY--GYMAPEYAMNGIVSMKA 551
R+ E T R + + APE A+ G ++K+
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 552 DVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLR 610
DV+SFG+LL E+V+ GR + L E +E PCP++ +
Sbjct: 188 DVWSFGILLTELVTKGRVPYPGMNNREVL-------------EQVERGYRMPCPQDCPIS 234
Query: 611 CIHAGLLCVHDQAVNRPTMADVVSCL 636
+ C RPT + S L
Sbjct: 235 LHELMIHCWKKDPEERPTFEYLQSFL 260
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 83/209 (39%), Gaps = 52/209 (24%)
Query: 409 FNFQTIAAATNNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRLSGRTIRLMGC--SLHG 465
F + A ++ + LG+G FG V K + GQ AVK +S R ++ SL
Sbjct: 16 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 75
Query: 466 AERIL----------VYEFMPNKSLDFFI---------FDSV-KKKQLNWSKRITIIEGI 505
++L +YEF +K + + FD + +K+ + II +
Sbjct: 76 EVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV 135
Query: 506 AQGLIYLHKYSRLRMN--------ESKVNTNRV--------------------VGTYGYM 537
G+ Y HK + + ESK + +GT Y+
Sbjct: 136 LSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYI 195
Query: 538 APEYAMNGIVSMKADVFSFGVLLLEIVSG 566
APE ++G K DV+S GV+L ++SG
Sbjct: 196 APE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 112/297 (37%), Gaps = 90/297 (30%)
Query: 416 AATNNFSTTNKLGEGGFGPVYKGKLLDGQV-------IAVKRLS---------------- 452
A + + +LG+G FG VY+G + G V +A+K ++
Sbjct: 44 VAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 102
Query: 453 -------GRTIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLN--------WSK 497
+RL+G G +++ E M L ++ S++ + N SK
Sbjct: 103 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSK 161
Query: 498 RITIIEGIAQGLIYL------HKYSRLRMNESKVNTNRVVGTYG---------------- 535
I + IA G+ YL H+ R + +G +G
Sbjct: 162 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 221
Query: 536 ------YMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKE 588
+M+PE +G+ + +DV+SFGV+L EI + + E+ L V E
Sbjct: 222 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV----ME 277
Query: 589 GKASELMEAALDGP--CPEN--ELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQ 641
G LD P CP+ EL+R +C RP+ +++S +++ +
Sbjct: 278 G-------GLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEEME 321
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 78/188 (41%), Gaps = 50/188 (26%)
Query: 426 KLGEGGFGPVYKGKLLDGQVIAVKRLSGRTI---------RLMGCSLH----------GA 466
KLG+G FG V+ G +A+K L T+ ++M H
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 467 ERI-LVYEFMPNKSL-DFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK----YSRLRM 520
E I +V E+M SL DF ++ K L + + + IA G+ Y+ + + LR
Sbjct: 251 EPIYIVGEYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 308
Query: 521 NESKVNTNRV--VGTYG---------------------YMAPEYAMNGIVSMKADVFSFG 557
V N V V +G + APE A+ G ++K+DV+SFG
Sbjct: 309 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 368
Query: 558 VLLLEIVS 565
+LL E+ +
Sbjct: 369 ILLTELTT 376
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 112/297 (37%), Gaps = 90/297 (30%)
Query: 416 AATNNFSTTNKLGEGGFGPVYKGKLLDGQV-------IAVKRLSG--------------- 453
A + + +LG+G FG VY+G + G V +A+K ++
Sbjct: 15 VAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 73
Query: 454 --------RTIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLN--------WSK 497
+RL+G G +++ E M L ++ S++ + N SK
Sbjct: 74 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSK 132
Query: 498 RITIIEGIAQGLIYL------HKYSRLRMNESKVNTNRVVGTYG---------------- 535
I + IA G+ YL H+ R + +G +G
Sbjct: 133 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 192
Query: 536 ------YMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKE 588
+M+PE +G+ + +DV+SFGV+L EI + + E+ L V E
Sbjct: 193 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV----ME 248
Query: 589 GKASELMEAALDGP--CPEN--ELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQ 641
G LD P CP+ EL+R +C RP+ +++S +++ +
Sbjct: 249 G-------GLLDKPDNCPDMLFELMR------MCWQYNPKMRPSFLEIISSIKEEME 292
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 532 GTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSG 566
G Y +MAPE + S +DV+S+GVLL E+++G
Sbjct: 176 GAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTG 210
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 77/187 (41%), Gaps = 48/187 (25%)
Query: 426 KLGEGGFGPVYKGKLLDGQVIAVKRLSGRTI---------RLMGCSLH----------GA 466
KLG+G FG V+ G +A+K L T+ ++M H
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 467 ERI-LVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK----YSRLRMN 521
E I +V E+M SL F+ + K L + + + IA G+ Y+ + + LR
Sbjct: 85 EPIYIVIEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 143
Query: 522 ESKVNTNRV--VGTYG---------------------YMAPEYAMNGIVSMKADVFSFGV 558
V N V V +G + APE A+ G ++K+DV+SFG+
Sbjct: 144 NILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 559 LLLEIVS 565
LL E+ +
Sbjct: 204 LLTELTT 210
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Query: 525 VNTNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEE------RP 578
TN GT Y+APE + + D +SFGVLL E++ G+ + DEE R
Sbjct: 173 AKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRM 232
Query: 579 LNLVGYLWKEGKASELM 595
N W E +A +L+
Sbjct: 233 DNPFYPRWLEKEAKDLL 249
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 78/188 (41%), Gaps = 50/188 (26%)
Query: 426 KLGEGGFGPVYKGKLLDGQVIAVKRLSGRTI---------RLMGCSLH----------GA 466
KLG+G FG V+ G +A+K L T+ ++M H
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 467 ERI-LVYEFMPNKSL-DFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK----YSRLRM 520
E I +V E+M SL DF ++ K L + + + IA G+ Y+ + + LR
Sbjct: 78 EPIYIVTEYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 135
Query: 521 NESKVNTNRV--VGTYG---------------------YMAPEYAMNGIVSMKADVFSFG 557
V N V V +G + APE A+ G ++K+DV+SFG
Sbjct: 136 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 195
Query: 558 VLLLEIVS 565
+LL E+ +
Sbjct: 196 ILLTELTT 203
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 77/187 (41%), Gaps = 48/187 (25%)
Query: 426 KLGEGGFGPVYKGKLLDGQVIAVKRLSGRTI---------RLMGCSLH----------GA 466
KLG+G FG V+ G +A+K L T+ ++M H
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 467 ERI-LVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK----YSRLRMN 521
E I +V E+M SL F+ + K L + + + IA G+ Y+ + + LR
Sbjct: 85 EPIYIVIEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 143
Query: 522 ESKVNTNRV--VGTYG---------------------YMAPEYAMNGIVSMKADVFSFGV 558
V N V V +G + APE A+ G ++K+DV+SFG+
Sbjct: 144 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 559 LLLEIVS 565
LL E+ +
Sbjct: 204 LLTELTT 210
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 77/187 (41%), Gaps = 48/187 (25%)
Query: 426 KLGEGGFGPVYKGKLLDGQVIAVKRLSGRTI---------RLMGCSLH----------GA 466
KLG+G FG V+ G +A+K L T+ ++M H
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 467 ERI-LVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK----YSRLRMN 521
E I +V E+M SL F+ + K L + + + IA G+ Y+ + + LR
Sbjct: 74 EPIYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 132
Query: 522 ESKVNTNRV--VGTYG---------------------YMAPEYAMNGIVSMKADVFSFGV 558
V N V V +G + APE A+ G ++K+DV+SFG+
Sbjct: 133 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 192
Query: 559 LLLEIVS 565
LL E+ +
Sbjct: 193 LLTELTT 199
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 77/187 (41%), Gaps = 48/187 (25%)
Query: 426 KLGEGGFGPVYKGKLLDGQVIAVKRLSGRTI---------RLMGCSLH----------GA 466
KLG+G FG V+ G +A+K L T+ ++M H
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 467 ERI-LVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK----YSRLRMN 521
E I +V E+M SL F+ + K L + + + IA G+ Y+ + + LR
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 143
Query: 522 ESKVNTNRV--VGTYG---------------------YMAPEYAMNGIVSMKADVFSFGV 558
V N V V +G + APE A+ G ++K+DV+SFG+
Sbjct: 144 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 559 LLLEIVS 565
LL E+ +
Sbjct: 204 LLTELTT 210
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 77/187 (41%), Gaps = 48/187 (25%)
Query: 426 KLGEGGFGPVYKGKLLDGQVIAVKRLSGRTI---------RLMGCSLH----------GA 466
KLG+G FG V+ G +A+K L T+ ++M H
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 467 ERI-LVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK----YSRLRMN 521
E I +V E+M SL F+ + K L + + + IA G+ Y+ + + LR
Sbjct: 85 EPIYIVCEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 143
Query: 522 ESKVNTNRV--VGTYG---------------------YMAPEYAMNGIVSMKADVFSFGV 558
V N V V +G + APE A+ G ++K+DV+SFG+
Sbjct: 144 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 559 LLLEIVS 565
LL E+ +
Sbjct: 204 LLTELTT 210
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 77/187 (41%), Gaps = 48/187 (25%)
Query: 426 KLGEGGFGPVYKGKLLDGQVIAVKRLSGRTI---------RLMGCSLH----------GA 466
KLG+G FG V+ G +A+K L T+ ++M H
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 467 ERI-LVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK----YSRLRMN 521
E I +V E+M SL F+ + K L + + + IA G+ Y+ + + LR
Sbjct: 76 EPIYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 134
Query: 522 ESKVNTNRV--VGTYG---------------------YMAPEYAMNGIVSMKADVFSFGV 558
V N V V +G + APE A+ G ++K+DV+SFG+
Sbjct: 135 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 194
Query: 559 LLLEIVS 565
LL E+ +
Sbjct: 195 LLTELTT 201
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 77/187 (41%), Gaps = 48/187 (25%)
Query: 426 KLGEGGFGPVYKGKLLDGQVIAVKRLSGRTI---------RLMGCSLH----------GA 466
KLG+G FG V+ G +A+K L T+ ++M H
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 467 ERI-LVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK----YSRLRMN 521
E I +V E+M SL F+ + K L + + + IA G+ Y+ + + LR
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 143
Query: 522 ESKVNTNRV--VGTYG---------------------YMAPEYAMNGIVSMKADVFSFGV 558
V N V V +G + APE A+ G ++K+DV+SFG+
Sbjct: 144 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 559 LLLEIVS 565
LL E+ +
Sbjct: 204 LLTELTT 210
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 73/191 (38%), Gaps = 52/191 (27%)
Query: 424 TNKLGEGGFGPVYKGKLLDGQVIAVKRLSG---------------------RTIRLMGCS 462
+LG G FG V+ G +AVK L R +RL
Sbjct: 14 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 73
Query: 463 LHGAERILVYEFMPNKSL-DFFIFDSVKKKQLNWSKRITIIEGIAQGLI------YLHKY 515
I+ E+M N SL DF S K +N K + + IA+G+ Y+H+
Sbjct: 74 TQEPIYIIT-EYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERNYIHRN 130
Query: 516 SRL-------------------RMNESKVNTNRVVGTY--GYMAPEYAMNGIVSMKADVF 554
R R+ E T R + + APE G ++K+DV+
Sbjct: 131 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 190
Query: 555 SFGVLLLEIVS 565
SFG+LL EIV+
Sbjct: 191 SFGILLTEIVT 201
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Query: 467 ERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN 526
E +L + + K ++F F S + L ++ + + G + + + + V
Sbjct: 172 EDLLCFAYQVAKGMEFLEFKSCVHRDLA-ARNVLVTHGKVVKICDFGLARDIMSDSNYVV 230
Query: 527 TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE GI ++K+DV+S+G+LL EI S
Sbjct: 231 RGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 531 VGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGR 567
VGT GYMAPE N + D ++ G LL E+++G+
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 73/191 (38%), Gaps = 52/191 (27%)
Query: 424 TNKLGEGGFGPVYKGKLLDGQVIAVKRLSG---------------------RTIRLMGCS 462
+LG G FG V+ G +AVK L R +RL
Sbjct: 13 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 72
Query: 463 LHGAERILVYEFMPNKSL-DFFIFDSVKKKQLNWSKRITIIEGIAQGLI------YLHKY 515
I+ E+M N SL DF S K +N K + + IA+G+ Y+H+
Sbjct: 73 TQEPIYIIT-EYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERNYIHRD 129
Query: 516 SRL-------------------RMNESKVNTNRVVGTY--GYMAPEYAMNGIVSMKADVF 554
R R+ E T R + + APE G ++K+DV+
Sbjct: 130 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 189
Query: 555 SFGVLLLEIVS 565
SFG+LL EIV+
Sbjct: 190 SFGILLTEIVT 200
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 531 VGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGR 567
VGT GYMAPE N + D ++ G LL E+++G+
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 91/229 (39%), Gaps = 49/229 (21%)
Query: 456 IRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYL--- 512
IRL G ++V E+M N SLD F+ Q + + ++ GIA G+ YL
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 513 -HKYSRLRMNESKVNTNRV--VGTYG-----------------------YMAPEYAMNGI 546
+ + L +N+N V V +G + +PE
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 547 VSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDG---PC 603
+ +DV+S+G++L E++S ERP + E ++++A +G P
Sbjct: 227 FTSASDVWSYGIVLWEVMSY--------GERP-------YWEMSNQDVIKAVDEGYRLPP 271
Query: 604 PENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQHFSSVLLLRSS 652
P + L C NRP +VS L + ++ S+ ++ S+
Sbjct: 272 PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSA 320
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 91/220 (41%), Gaps = 60/220 (27%)
Query: 397 RRTKDMKHELKGFNFQTIAAATNNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSGRT 455
R++++ +H + + + + +LG+G FG VYK K + G + A K + ++
Sbjct: 3 RKSREYEHVRRDLDPNEV------WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS 56
Query: 456 ----------------------IRLMGCSLHGAERILVYEFMPNKSLDFFIFD------- 486
++L+G H + ++ EF P ++D + +
Sbjct: 57 EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTE 116
Query: 487 ---SVKKKQ----LNW--SKRITIIEGIAQGLIYLHKYSRLRMNESKVNTNRV------- 530
V +Q LN+ SKRI I + G + + +R+ + V+ +
Sbjct: 117 PQIQVVCRQMLEALNFLHSKRI-IHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD 175
Query: 531 --VGTYGYMAPEYAM-----NGIVSMKADVFSFGVLLLEI 563
+GT +MAPE M + KAD++S G+ L+E+
Sbjct: 176 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 91/229 (39%), Gaps = 49/229 (21%)
Query: 456 IRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYL--- 512
IRL G ++V E+M N SLD F+ Q + + ++ GIA G+ YL
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 513 -HKYSRLRMNESKVNTNRV--VGTYG-----------------------YMAPEYAMNGI 546
+ + L +N+N V V +G + +PE
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 547 VSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDG---PC 603
+ +DV+S+G++L E++S ERP + E ++++A +G P
Sbjct: 227 FTSASDVWSYGIVLWEVMSY--------GERP-------YWEMSNQDVIKAVDEGYRLPP 271
Query: 604 PENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQHFSSVLLLRSS 652
P + L C NRP +VS L + ++ S+ ++ S+
Sbjct: 272 PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSA 320
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 91/229 (39%), Gaps = 49/229 (21%)
Query: 456 IRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYL--- 512
IRL G ++V E+M N SLD F+ Q + + ++ GIA G+ YL
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 513 -HKYSRLRMNESKVNTNRV--VGTYG-----------------------YMAPEYAMNGI 546
+ + L +N+N V V +G + +PE
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 547 VSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDG---PC 603
+ +DV+S+G++L E++S ERP + E ++++A +G P
Sbjct: 227 FTSASDVWSYGIVLWEVMSY--------GERP-------YWEMSNQDVIKAVDEGYRLPP 271
Query: 604 PENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQHFSSVLLLRSS 652
P + L C NRP +VS L + ++ S+ ++ S+
Sbjct: 272 PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSA 320
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 91/229 (39%), Gaps = 49/229 (21%)
Query: 456 IRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYL--- 512
IRL G ++V E+M N SLD F+ Q + + ++ GIA G+ YL
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 513 -HKYSRLRMNESKVNTNRV--VGTYG-----------------------YMAPEYAMNGI 546
+ + L +N+N V V +G + +PE
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 547 VSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDG---PC 603
+ +DV+S+G++L E++S ERP + E ++++A +G P
Sbjct: 227 FTSASDVWSYGIVLWEVMSY--------GERP-------YWEMSNQDVIKAVDEGYRLPP 271
Query: 604 PENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQHFSSVLLLRSS 652
P + L C NRP +VS L + ++ S+ ++ S+
Sbjct: 272 PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSA 320
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 91/229 (39%), Gaps = 49/229 (21%)
Query: 456 IRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYL--- 512
IRL G ++V E+M N SLD F+ Q + + ++ GIA G+ YL
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 513 -HKYSRLRMNESKVNTNRV--VGTYG-----------------------YMAPEYAMNGI 546
+ + L +N+N V V +G + +PE
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 547 VSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDG---PC 603
+ +DV+S+G++L E++S ERP + E ++++A +G P
Sbjct: 227 FTSASDVWSYGIVLWEVMSY--------GERP-------YWEMSNQDVIKAVDEGYRLPP 271
Query: 604 PENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQHFSSVLLLRSS 652
P + L C NRP +VS L + ++ S+ ++ S+
Sbjct: 272 PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSA 320
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 91/229 (39%), Gaps = 49/229 (21%)
Query: 456 IRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYL--- 512
IRL G ++V E+M N SLD F+ Q + + ++ GIA G+ YL
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 513 -HKYSRLRMNESKVNTNRV--VGTYG-----------------------YMAPEYAMNGI 546
+ + L +N+N V V +G + +PE
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 547 VSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDG---PC 603
+ +DV+S+G++L E++S ERP + E ++++A +G P
Sbjct: 227 FTSASDVWSYGIVLWEVMSY--------GERP-------YWEMSNQDVIKAVDEGYRLPP 271
Query: 604 PENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQHFSSVLLLRSS 652
P + L C NRP +VS L + ++ S+ ++ S+
Sbjct: 272 PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSA 320
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 91/229 (39%), Gaps = 49/229 (21%)
Query: 456 IRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYL--- 512
IRL G ++V E+M N SLD F+ Q + + ++ GIA G+ YL
Sbjct: 107 IRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGMKYLSDM 164
Query: 513 -HKYSRLRMNESKVNTNRV--VGTYG-----------------------YMAPEYAMNGI 546
+ + L +N+N V V +G + +PE
Sbjct: 165 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 224
Query: 547 VSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDG---PC 603
+ +DV+S+G++L E++S ERP W E ++++A +G P
Sbjct: 225 FTSASDVWSYGIVLWEVMSY--------GERP------YW-EMSNQDVIKAVDEGYRLPP 269
Query: 604 PENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQHFSSVLLLRSS 652
P + L C NRP +VS L + ++ S+ ++ S+
Sbjct: 270 PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSA 318
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 81/196 (41%), Gaps = 54/196 (27%)
Query: 421 FSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSGRT----------------------IR 457
+ +LG+G FG VYK K + G + A K + ++ ++
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 72
Query: 458 LMGCSLHGAERILVYEFMPNKSLDFFIFD----------SVKKKQ----LNW--SKRITI 501
L+G H + ++ EF P ++D + + V +Q LN+ SKRI I
Sbjct: 73 LLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRI-I 131
Query: 502 IEGIAQGLIYLHKYSRLRMNESKVNTNRV---------VGTYGYMAPEYAM-----NGIV 547
+ G + + +R+ + V+ + +GT +MAPE M +
Sbjct: 132 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPY 191
Query: 548 SMKADVFSFGVLLLEI 563
KAD++S G+ L+E+
Sbjct: 192 DYKADIWSLGITLIEM 207
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 76/189 (40%), Gaps = 50/189 (26%)
Query: 425 NKLGEGGFGPVYKGKLLDGQVIAVKRLSGRTIRLMG----------------CSLHGA-- 466
KLG G FG V+ +AVK + ++ + LH
Sbjct: 21 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 80
Query: 467 -ERI-LVYEFMPNKSL-DFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK----YSRLR 519
E I ++ EFM SL DF D K+ L K I IA+G+ ++ + + LR
Sbjct: 81 KEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQRNYIHRDLR 138
Query: 520 MNESKVNTNRV--VGTYG---------------------YMAPEYAMNGIVSMKADVFSF 556
V+ + V + +G + APE G ++K+DV+SF
Sbjct: 139 AANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSF 198
Query: 557 GVLLLEIVS 565
G+LL+EIV+
Sbjct: 199 GILLMEIVT 207
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 78/188 (41%), Gaps = 50/188 (26%)
Query: 426 KLGEGGFGPVYKGKLLDGQVIAVKRLSGRTI---------RLMGCSLH----------GA 466
KLG+G FG V+ G +A+K L T+ ++M H
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 467 ERI-LVYEFMPNKSL-DFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK----YSRLRM 520
E I +V E+M SL DF ++ K L + + + IA G+ Y+ + + LR
Sbjct: 82 EPIYIVTEYMNKGSLLDFLKGET--GKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRA 139
Query: 521 NESKVNTNRV--VGTYG---------------------YMAPEYAMNGIVSMKADVFSFG 557
V N V V +G + APE A+ G ++K+DV+SFG
Sbjct: 140 ANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 199
Query: 558 VLLLEIVS 565
+LL E+ +
Sbjct: 200 ILLTELTT 207
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 88/220 (40%), Gaps = 46/220 (20%)
Query: 461 CSLHGAERI-LVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLR 519
C GA + LV E++P SL D + + + ++ + + I +G+ YLH +
Sbjct: 102 CEDAGAASLQLVMEYVPLGSLR----DYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIH 157
Query: 520 MNESKVNT----NRVV--GTYG-----------------------YMAPEYAMNGIVSMK 550
+ + N +R+V G +G + APE
Sbjct: 158 RDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYA 217
Query: 551 ADVFSFGVLLLEIVSGRKNNNCYDEERP----LNLVGYLWKEG---KASELMEAALDGPC 603
+DV+SFGV L E+++ +C + P L L+G + + +EL+E P
Sbjct: 218 SDVWSFGVTLYELLT-----HCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPR 272
Query: 604 PENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQHF 643
P+ H C +A RPT +++ L+ ++ +
Sbjct: 273 PDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY 312
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 91/229 (39%), Gaps = 49/229 (21%)
Query: 456 IRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYL--- 512
IRL G ++V E+M N SLD F+ Q + + ++ GIA G+ YL
Sbjct: 97 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRK--HDAQFTVIQLVGMLRGIASGMKYLSDM 154
Query: 513 -HKYSRLRMNESKVNTNRV--VGTYG-----------------------YMAPEYAMNGI 546
+ + L +N+N V V +G + +PE
Sbjct: 155 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 214
Query: 547 VSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDG---PC 603
+ +DV+S+G++L E++S ERP + E ++++A +G P
Sbjct: 215 FTSASDVWSYGIVLWEVMSY--------GERP-------YWEMSNQDVIKAVDEGYRLPP 259
Query: 604 PENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQHFSSVLLLRSS 652
P + L C NRP +VS L + ++ S+ ++ S+
Sbjct: 260 PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSA 308
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 74/189 (39%), Gaps = 50/189 (26%)
Query: 425 NKLGEGGFGPVYKGKLLDGQVIAVKRLSGRTIRLMG----------------CSLHGA-- 466
KLG G FG V+ +AVK + ++ + LH
Sbjct: 194 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 253
Query: 467 -ERI-LVYEFMPNKSL-DFFIFDSVKKKQLNWSKRITIIEGIAQGLI------YLHKYSR 517
E I ++ EFM SL DF D K+ L K I IA+G+ Y+H+ R
Sbjct: 254 KEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQRNYIHRDLR 311
Query: 518 L-------------------RMNESKVNTNRVVGTY--GYMAPEYAMNGIVSMKADVFSF 556
R+ E T R + + APE G ++K+DV+SF
Sbjct: 312 AANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSF 371
Query: 557 GVLLLEIVS 565
G+LL+EIV+
Sbjct: 372 GILLMEIVT 380
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 91/229 (39%), Gaps = 49/229 (21%)
Query: 456 IRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYL--- 512
IRL G ++V E+M N SLD F+ Q + + ++ GIA G+ YL
Sbjct: 80 IRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGMKYLSDM 137
Query: 513 -HKYSRLRMNESKVNTNRV--VGTYG-----------------------YMAPEYAMNGI 546
+ + L +N+N V V +G + +PE
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 197
Query: 547 VSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDG---PC 603
+ +DV+S+G++L E++S ERP W E ++++A +G P
Sbjct: 198 FTSASDVWSYGIVLWEVMSY--------GERP------YW-EMSNQDVIKAVDEGYRLPP 242
Query: 604 PENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQHFSSVLLLRSS 652
P + L C NRP +VS L + ++ S+ ++ S+
Sbjct: 243 PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSA 291
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 76/187 (40%), Gaps = 48/187 (25%)
Query: 426 KLGEGGFGPVYKGKLLDGQVIAVKRLSG---------RTIRLMGCSLH----------GA 466
KLG+G FG V+ G +A+K L + ++M H
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 251
Query: 467 ERI-LVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK----YSRLRMN 521
E I +V E+M SL F+ + K L + + + IA G+ Y+ + + LR
Sbjct: 252 EPIYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 310
Query: 522 ESKVNTNRV--VGTYG---------------------YMAPEYAMNGIVSMKADVFSFGV 558
V N V V +G + APE A+ G ++K+DV+SFG+
Sbjct: 311 NILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 370
Query: 559 LLLEIVS 565
LL E+ +
Sbjct: 371 LLTELTT 377
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 90/229 (39%), Gaps = 49/229 (21%)
Query: 456 IRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK- 514
IRL G ++V E+M N SLD F+ Q + + ++ GIA G+ YL
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 515 ---YSRLRMNESKVNTNRV--VGTYG-----------------------YMAPEYAMNGI 546
+ L +N+N V V +G + +PE
Sbjct: 167 GFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 547 VSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDG---PC 603
+ +DV+S+G++L E++S ERP + E ++++A +G P
Sbjct: 227 FTSASDVWSYGIVLWEVMSY--------GERP-------YWEMSNQDVIKAVDEGYRLPP 271
Query: 604 PENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQHFSSVLLLRSS 652
P + L C NRP +VS L + ++ S+ ++ S+
Sbjct: 272 PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSA 320
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 527 TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGR 567
N VGT YMAPE S+++D++S G+ L+E+ GR
Sbjct: 170 ANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 78/188 (41%), Gaps = 50/188 (26%)
Query: 426 KLGEGGFGPVYKGKLLDGQVIAVKRLSGRTI---------RLMGCSLH----------GA 466
KLG+G FG V+ G +A+K L T+ ++M H
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 467 ERI-LVYEFMPNKSL-DFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK----YSRLRM 520
E I +V E+M SL DF ++ K L + + + IA G+ Y+ + + LR
Sbjct: 82 EPIYIVTEYMNKGSLLDFLKGET--GKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRA 139
Query: 521 NESKVNTNRV--VGTYG---------------------YMAPEYAMNGIVSMKADVFSFG 557
V N V V +G + APE A+ G ++K+DV+SFG
Sbjct: 140 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 199
Query: 558 VLLLEIVS 565
+LL E+ +
Sbjct: 200 ILLTELTT 207
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 77/197 (39%), Gaps = 60/197 (30%)
Query: 427 LGEGGFGPVYKGKLL----DGQVIAVKRLSG-----------------------RTIRLM 459
+G G FG V +G+L +A+K L G IRL
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 460 GCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLR 519
G + +++ EFM N +LD F+ + Q + + ++ GIA G+ YL + S +
Sbjct: 84 GVVTNSMPVMILTEFMENGALDSFL--RLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVH 141
Query: 520 MNESK----VNTNRV--VGTYG-------------------------YMAPEYAMNGIVS 548
+ + VN+N V V +G + APE +
Sbjct: 142 RDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFT 201
Query: 549 MKADVFSFGVLLLEIVS 565
+D +S+G+++ E++S
Sbjct: 202 SASDAWSYGIVMWEVMS 218
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 77/197 (39%), Gaps = 60/197 (30%)
Query: 427 LGEGGFGPVYKGKLL----DGQVIAVKRLSG-----------------------RTIRLM 459
+G G FG V +G+L +A+K L G IRL
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 460 GCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLR 519
G + +++ EFM N +LD F+ + Q + + ++ GIA G+ YL + S +
Sbjct: 82 GVVTNSMPVMILTEFMENGALDSFL--RLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVH 139
Query: 520 MNESK----VNTNRV--VGTYG-------------------------YMAPEYAMNGIVS 548
+ + VN+N V V +G + APE +
Sbjct: 140 RDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFT 199
Query: 549 MKADVFSFGVLLLEIVS 565
+D +S+G+++ E++S
Sbjct: 200 SASDAWSYGIVMWEVMS 216
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 78/187 (41%), Gaps = 48/187 (25%)
Query: 426 KLGEGGFGPVYKGKLLDGQVIAVKRLSGRTI---------RLMGCSLH----------GA 466
KLG+G FG V+ G +A+K L T+ ++M H
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 467 ERI-LVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKV 525
E I +V E+M SL F+ + K L + + + IA G+ Y+ + + + + +
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVERMNYVHRDLAAA 143
Query: 526 NT----NRV--VGTYG---------------------YMAPEYAMNGIVSMKADVFSFGV 558
N N V V +G + APE A+ G ++K+DV+SFG+
Sbjct: 144 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 559 LLLEIVS 565
LL E+ +
Sbjct: 204 LLTELTT 210
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 46/104 (44%), Gaps = 17/104 (16%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS---GRKNNNCYDEERPLNLVGYLWKEGKAS 592
+MAPE + + ++++DV+SFGVLL EI S DEE L KEG
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRL-----KEGTRM 266
Query: 593 ELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCL 636
A D PE L C H + RPT +++V L
Sbjct: 267 R----APDYTTPE-----MYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 76/187 (40%), Gaps = 48/187 (25%)
Query: 426 KLGEGGFGPVYKGKLLDGQVIAVKRLSGRTI---------RLMGCSLH----------GA 466
KLG+G FG V+ G +A+K L T+ ++M H
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 467 ERI-LVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK----YSRLRMN 521
E I +V E+M L F+ + K L + + + IA G+ Y+ + + LR
Sbjct: 85 EPIYIVMEYMSKGCLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 143
Query: 522 ESKVNTNRV--VGTYG---------------------YMAPEYAMNGIVSMKADVFSFGV 558
V N V V +G + APE A+ G ++K+DV+SFG+
Sbjct: 144 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 559 LLLEIVS 565
LL E+ +
Sbjct: 204 LLTELTT 210
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 76/187 (40%), Gaps = 48/187 (25%)
Query: 426 KLGEGGFGPVYKGKLLDGQVIAVKRLSGRTI---------RLMGCSLH----------GA 466
KLG+G FG V+ G +A+K L T+ ++M H
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 467 ERI-LVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK----YSRLRMN 521
E I +V E+M L F+ + K L + + + IA G+ Y+ + + LR
Sbjct: 85 EPIYIVTEYMSKGCLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA 143
Query: 522 ESKVNTNRV--VGTYG---------------------YMAPEYAMNGIVSMKADVFSFGV 558
V N V V +G + APE A+ G ++K+DV+SFG+
Sbjct: 144 NILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 559 LLLEIVS 565
LL E+ +
Sbjct: 204 LLTELTT 210
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + I S K+DV+S+GVLL EI S
Sbjct: 267 WMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 35.8 bits (81), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 527 TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLW 586
N VGT YM+PE S+++D++S G+ L+E+ GR D + L L+
Sbjct: 222 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE-LELMFGCQ 280
Query: 587 KEGKASE 593
EG A+E
Sbjct: 281 VEGDAAE 287
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 518 LRMNESKVNTNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGR 567
+ + + T GT G+MAPE + D F+ GV L E+++ R
Sbjct: 337 VELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 518 LRMNESKVNTNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGR 567
+ + + T GT G+MAPE + D F+ GV L E+++ R
Sbjct: 337 VELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 72/191 (37%), Gaps = 52/191 (27%)
Query: 424 TNKLGEGGFGPVYKGKLLDGQVIAVKRLSG---------------------RTIRLMGCS 462
+LG G G V+ G +AVK L R +RL
Sbjct: 18 VERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 463 LHGAERILVYEFMPNKSL-DFFIFDSVKKKQLNWSKRITIIEGIAQGLI------YLHKY 515
I+ E+M N SL DF S K +N K + + IA+G+ Y+H+
Sbjct: 78 TQEPIYIIT-EYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 516 SRL-------------------RMNESKVNTNRVVGTY--GYMAPEYAMNGIVSMKADVF 554
R R+ E T R + + APE G ++K+DV+
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 555 SFGVLLLEIVS 565
SFG+LL EIV+
Sbjct: 195 SFGILLTEIVT 205
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 518 LRMNESKVNTNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGR 567
+ + + T GT G+MAPE + D F+ GV L E+++ R
Sbjct: 337 VELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 518 LRMNESKVNTNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGR 567
+ + + T GT G+MAPE + D F+ GV L E+++ R
Sbjct: 337 VELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 88/223 (39%), Gaps = 39/223 (17%)
Query: 456 IRLMGCSLHGAERI--LVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLH 513
++ GC E+ LV E++P SL D + + + ++ + + I +G+ YLH
Sbjct: 74 VKYKGCCEDQGEKSVQLVMEYVPLGSLR----DYLPRHCVGLAQLLLFAQQICEGMAYLH 129
Query: 514 K----YSRLRMNESKVNTNRVV--GTYG-----------------------YMAPEYAMN 544
+ L ++ +R+V G +G + APE
Sbjct: 130 AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 189
Query: 545 GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEG---KASELMEAALDG 601
+DV+SFGV L E+++ +N + L+G+ + + +EL+E
Sbjct: 190 CKFYYASDVWSFGVTLYELLTYCDSNQS-PHTKFTELIGHTQGQMTVLRLTELLERGERL 248
Query: 602 PCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQHFS 644
P P+ H C +A RPT ++V L+ + +
Sbjct: 249 PRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQEKYQ 291
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 527 TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLW 586
N VGT YM+PE S+++D++S G+ L+E+ GR D + L L+
Sbjct: 160 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE-LELMFGCQ 218
Query: 587 KEGKASE 593
EG A+E
Sbjct: 219 VEGDAAE 225
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 527 TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLW 586
N VGT YM+PE S+++D++S G+ L+E+ GR D + L L+
Sbjct: 160 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE-LELMFGCQ 218
Query: 587 KEGKASE 593
EG A+E
Sbjct: 219 VEGDAAE 225
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 527 TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLW 586
N VGT YM+PE S+++D++S G+ L+E+ GR D + L L+
Sbjct: 187 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD-AKELELMFGCQ 245
Query: 587 KEGKASE 593
EG A+E
Sbjct: 246 VEGDAAE 252
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 90/229 (39%), Gaps = 49/229 (21%)
Query: 456 IRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYL--- 512
IRL G ++V E M N SLD F+ Q + + ++ GIA G+ YL
Sbjct: 109 IRLEGVVTKSKPVMIVTEXMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 513 -HKYSRLRMNESKVNTNRV--VGTYG-----------------------YMAPEYAMNGI 546
+ + L +N+N V V +G + +PE
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 547 VSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDG---PC 603
+ +DV+S+G++L E++S ERP + E ++++A +G P
Sbjct: 227 FTSASDVWSYGIVLWEVMSY--------GERP-------YWEMSNQDVIKAVDEGYRLPP 271
Query: 604 PENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQHFSSVLLLRSS 652
P + L C NRP +VS L + ++ S+ ++ S+
Sbjct: 272 PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSA 320
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 88/223 (39%), Gaps = 39/223 (17%)
Query: 456 IRLMGCSLHGAERI--LVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLH 513
++ GC E+ LV E++P SL D + + + ++ + + I +G+ YLH
Sbjct: 73 VKYKGCCEDQGEKSVQLVMEYVPLGSLR----DYLPRHCVGLAQLLLFAQQICEGMAYLH 128
Query: 514 K----YSRLRMNESKVNTNRVV--GTYG-----------------------YMAPEYAMN 544
+ L ++ +R+V G +G + APE
Sbjct: 129 AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 188
Query: 545 GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEG---KASELMEAALDG 601
+DV+SFGV L E+++ +N + L+G+ + + +EL+E
Sbjct: 189 CKFYYASDVWSFGVTLYELLTYCDSNQS-PHTKFTELIGHTQGQMTVLRLTELLERGERL 247
Query: 602 PCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQHFS 644
P P+ H C +A RPT ++V L+ + +
Sbjct: 248 PRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQEKYQ 290
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 527 TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGR 567
N VGT YM+PE S+++D++S G+ L+E+ GR
Sbjct: 163 ANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + + ++++DV+SFGVLL EI S
Sbjct: 207 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 48/108 (44%), Gaps = 25/108 (23%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS-------GRKNNNCYDEERPLNLVGYLWKE 588
+MAPE + + ++++DV+SFGVLL EI S G K DEE L KE
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK----IDEEFCRRL-----KE 266
Query: 589 GKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCL 636
G A D PE L C H + RPT +++V L
Sbjct: 267 GTRMR----APDYTTPE-----MYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + + ++++DV+SFGVLL EI S
Sbjct: 207 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + + ++++DV+SFGVLL EI S
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + + ++++DV+SFGVLL EI S
Sbjct: 207 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + + ++++DV+SFGVLL EI S
Sbjct: 207 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 58/140 (41%), Gaps = 31/140 (22%)
Query: 455 TIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYL-- 512
+ L G G ++V EFM N +LD F+ Q + + ++ GIA G+ YL
Sbjct: 106 VVHLEGVVTRGKPVMIVIEFMENGALDAFL--RKHDGQFTVIQLVGMLRGIAAGMRYLAD 163
Query: 513 --HKYSRLRMNESKVNTNRV--VGTYG-----------------------YMAPEYAMNG 545
+ + L VN+N V V +G + APE
Sbjct: 164 MGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYR 223
Query: 546 IVSMKADVFSFGVLLLEIVS 565
+ +DV+S+G+++ E++S
Sbjct: 224 KFTSASDVWSYGIVMWEVMS 243
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + + ++++DV+SFGVLL EI S
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + + ++++DV+SFGVLL EI S
Sbjct: 218 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 90/229 (39%), Gaps = 49/229 (21%)
Query: 456 IRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKY 515
IRL G ++V E M N SLD F+ Q + + ++ GIA G+ YL
Sbjct: 109 IRLEGVVTKSKPVMIVTEXMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 516 SRLRMNESK----VNTNRV--VGTYG-----------------------YMAPEYAMNGI 546
+ + + +N+N V V +G + +PE
Sbjct: 167 GAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 547 VSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDG---PC 603
+ +DV+S+G++L E++S ERP W E ++++A +G P
Sbjct: 227 FTSASDVWSYGIVLWEVMSY--------GERP------YW-EMSNQDVIKAVDEGYRLPP 271
Query: 604 PENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQHFSSVLLLRSS 652
P + L C NRP +VS L + ++ S+ ++ S+
Sbjct: 272 PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSA 320
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 79/204 (38%), Gaps = 56/204 (27%)
Query: 417 ATNNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRLSGRT-------------------- 455
+ NF K+GEG +G VYK + L G+V+A+K++ T
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 456 ----IRLMGCSLHGAERI-LVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLI 510
++L+ +H ++ LV+EF+ DF ++ L K + + + QGL
Sbjct: 61 HPNIVKLLDV-IHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIK--SYLFQLLQGLA 117
Query: 511 YLHKYSRLRMNESK----VNTN-----------RVVG-----------TYGYMAPEYAMN 544
+ H + L + +NT R G T Y APE +
Sbjct: 118 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 177
Query: 545 -GIVSMKADVFSFGVLLLEIVSGR 567
S D++S G + E+V+ R
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 527 TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLW 586
N VGT YM+PE S+++D++S G+ L+E+ GR D + L L+
Sbjct: 160 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE-LELMFGCQ 218
Query: 587 KEGKASE 593
EG A+E
Sbjct: 219 VEGDAAE 225
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 527 TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLW 586
N VGT YM+PE S+++D++S G+ L+E+ GR D + L L+
Sbjct: 160 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE-LELMFGCQ 218
Query: 587 KEGKASE 593
EG A+E
Sbjct: 219 VEGDAAE 225
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 48/108 (44%), Gaps = 25/108 (23%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS-------GRKNNNCYDEERPLNLVGYLWKE 588
+MAPE + + ++++DV+SFGVLL EI S G K DEE L KE
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK----IDEEFCRRL-----KE 262
Query: 589 GKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCL 636
G A D PE L C H + RPT +++V L
Sbjct: 263 GTRMR----APDYTTPE-----MYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + + ++++DV+SFGVLL EI S
Sbjct: 266 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + + ++++DV+SFGVLL EI S
Sbjct: 259 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 77/198 (38%), Gaps = 50/198 (25%)
Query: 419 NNFSTTNKLGEGGFGPVYKGKLLDGQVIAVKRLSG---------------------RTIR 457
+ + ++G G FG V+ G L+ +A+K + + ++
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQ 66
Query: 458 LMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSR 517
L G L A LV+EFM + L ++ ++ + + + +G+ YL + S
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEASV 124
Query: 518 LRMNESK----VNTNRV--VGTYG---------------------YMAPEYAMNGIVSMK 550
+ + + V N+V V +G + +PE S K
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 184
Query: 551 ADVFSFGVLLLEIVSGRK 568
+DV+SFGVL+ E+ S K
Sbjct: 185 SDVWSFGVLMWEVFSEGK 202
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + + ++++DV+SFGVLL EI S
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + + ++++DV+SFGVLL EI S
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + + ++++DV+SFGVLL EI S
Sbjct: 268 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + + ++++DV+SFGVLL EI S
Sbjct: 261 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 527 TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGR 567
N VGT YM+PE S+++D++S G+ L+E+ GR
Sbjct: 160 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 527 TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGR 567
N VGT YM+PE S+++D++S G+ L+E+ GR
Sbjct: 179 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 80/192 (41%), Gaps = 55/192 (28%)
Query: 427 LGEGGFGPVYKGK-LLDGQVIAVKRLSG------------RTIRLMGCSLHGAERILVYE 473
LG+G FG V K K + Q AVK ++ R + L+ L + ++E
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLK-KLDHPNIMKLFE 88
Query: 474 FMPNKSLDFFI----------FDSV-KKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMN- 521
+ + S F+I FD + K+K+ + II+ + G+ Y+HK++ + +
Sbjct: 89 ILEDSS-SFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDL 147
Query: 522 -------ESKVNTNRV--------------------VGTYGYMAPEYAMNGIVSMKADVF 554
ESK + +GT Y+APE + G K DV+
Sbjct: 148 KPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPE-VLRGTYDEKCDVW 206
Query: 555 SFGVLLLEIVSG 566
S GV+L ++SG
Sbjct: 207 SAGVILYILLSG 218
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 80/192 (41%), Gaps = 55/192 (28%)
Query: 427 LGEGGFGPVYKGK-LLDGQVIAVKRLSG------------RTIRLMGCSLHGAERILVYE 473
LG+G FG V K K + Q AVK ++ R + L+ L + ++E
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLK-KLDHPNIMKLFE 88
Query: 474 FMPNKSLDFFI----------FDSV-KKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMN- 521
+ + S F+I FD + K+K+ + II+ + G+ Y+HK++ + +
Sbjct: 89 ILEDSS-SFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDL 147
Query: 522 -------ESKVNTNRV--------------------VGTYGYMAPEYAMNGIVSMKADVF 554
ESK + +GT Y+APE + G K DV+
Sbjct: 148 KPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPE-VLRGTYDEKCDVW 206
Query: 555 SFGVLLLEIVSG 566
S GV+L ++SG
Sbjct: 207 SAGVILYILLSG 218
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 90/229 (39%), Gaps = 49/229 (21%)
Query: 456 IRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYL--- 512
IRL G ++V E M N SLD F+ Q + + ++ GIA G+ YL
Sbjct: 80 IRLEGVVTKSKPVMIVTEXMENGSLDSFLRK--HDAQFTVIQLVGMLRGIASGMKYLSDM 137
Query: 513 -HKYSRLRMNESKVNTNRV--VGTYG-----------------------YMAPEYAMNGI 546
+ + L +N+N V V +G + +PE
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 197
Query: 547 VSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDG---PC 603
+ +DV+S+G++L E++S ERP W E ++++A +G P
Sbjct: 198 FTSASDVWSYGIVLWEVMSY--------GERP------YW-EMSNQDVIKAVDEGYRLPP 242
Query: 604 PENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQHFSSVLLLRSS 652
P + L C NRP +VS L + ++ S+ ++ S+
Sbjct: 243 PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSA 291
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 523 SKVNTNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGR 567
S TN V+GT Y +PE A D++S G++L E++ G
Sbjct: 165 SLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 80/192 (41%), Gaps = 55/192 (28%)
Query: 427 LGEGGFGPVYKGK-LLDGQVIAVKRLSG------------RTIRLMGCSLHGAERILVYE 473
LG+G FG V K K + Q AVK ++ R + L+ L + ++E
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLK-KLDHPNIMKLFE 88
Query: 474 FMPNKSLDFFI----------FDSV-KKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMN- 521
+ + S F+I FD + K+K+ + II+ + G+ Y+HK++ + +
Sbjct: 89 ILEDSS-SFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDL 147
Query: 522 -------ESKVNTNRV--------------------VGTYGYMAPEYAMNGIVSMKADVF 554
ESK + +GT Y+APE + G K DV+
Sbjct: 148 KPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPE-VLRGTYDEKCDVW 206
Query: 555 SFGVLLLEIVSG 566
S GV+L ++SG
Sbjct: 207 SAGVILYILLSG 218
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 87/234 (37%), Gaps = 69/234 (29%)
Query: 399 TKDMKHELKGFNFQTIAAATNNFS---------TTNKLGEGGFGPVYKGKL-LDGQ---V 445
T MK + F F+ A F+ +G G FG V G L L G+
Sbjct: 4 TPGMKIFIDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIF 63
Query: 446 IAVKRL-SGRT----------------------IRLMGCSLHGAERILVYEFMPNKSLDF 482
+A+K L SG T I L G +++ EFM N SLD
Sbjct: 64 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 123
Query: 483 FIFDSVKKKQLNWSKRITIIEGIAQGLIYL----HKYSRLRMNESKVNTNRV--VGTYG- 535
F+ + Q + + ++ GIA G+ YL + + L VN+N V V +G
Sbjct: 124 FLRQN--DGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGL 181
Query: 536 ------------------------YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+ APE + +DV+S+G+++ E++S
Sbjct: 182 SRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + + ++++DV+SFGVLL EI S
Sbjct: 253 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 47/103 (45%), Gaps = 12/103 (11%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELM 595
+MA E + I + ++DV+SFGVLL EIV+ N Y P L L K M
Sbjct: 218 WMAIESLFDHIYTTQSDVWSFGVLLWEIVT--LGGNPYPGIPPERLFNLL----KTGHRM 271
Query: 596 EAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQ 638
E + C E E+ R + L C + RP AD+ L +
Sbjct: 272 ERPDN--CSE-EMYRLM---LQCWKQEPDKRPVFADISKDLEK 308
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 47/103 (45%), Gaps = 12/103 (11%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELM 595
+MA E + I + ++DV+SFGVLL EIV+ N Y P L L K M
Sbjct: 218 WMAIESLFDHIYTTQSDVWSFGVLLWEIVT--LGGNPYPGIPPERLFNLL----KTGHRM 271
Query: 596 EAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQ 638
E + C E E+ R + L C + RP AD+ L +
Sbjct: 272 ERPDN--CSE-EMYRLM---LQCWKQEPDKRPVFADISKDLEK 308
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 47/103 (45%), Gaps = 12/103 (11%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELM 595
+MA E + I + ++DV+SFGVLL EIV+ N Y P L L K M
Sbjct: 218 WMAIESLFDHIYTTQSDVWSFGVLLWEIVT--LGGNPYPGIPPERLFNLL----KTGHRM 271
Query: 596 EAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQ 638
E + C E E+ R + L C + RP AD+ L +
Sbjct: 272 ERPDN--CSE-EMYRLM---LQCWKQEPDKRPVFADISKDLEK 308
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 79/208 (37%), Gaps = 68/208 (32%)
Query: 426 KLGEGGFGPVYKGK---LL---DGQVIAVKRL-----SGR-----------------TIR 457
+LGEG FG V+ + LL D ++AVK L S R +R
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 458 LMGCSLHGAERILVYEFMPNKSLDFFIF------------DSVKKKQLNWSKRITIIEGI 505
G G ++V+E+M + L+ F+ + V L + + + +
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 506 AQGLIYL---HKYSR-LRMNESKVNTNRVV--GTYG----------------------YM 537
A G++YL H R L V VV G +G +M
Sbjct: 139 AAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWM 198
Query: 538 APEYAMNGIVSMKADVFSFGVLLLEIVS 565
PE + + ++DV+SFGV+L EI +
Sbjct: 199 PPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 83/219 (37%), Gaps = 53/219 (24%)
Query: 416 AATNNFSTTNKLGEGGFGPVYKGKLLDG----QVIAVKRLSGRTIRLMGCSLHGAER-IL 470
A + F LG+G FG V+ K + G Q+ A+K L T+++ ER IL
Sbjct: 21 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDIL 80
Query: 471 V-----------YEFMPNKSLDFFIFDSVKKKQL--NWSKRITIIEG--------IAQGL 509
V Y F L + I D ++ L SK + E +A L
Sbjct: 81 VEVNHPFIVKLHYAFQTEGKL-YLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALAL 139
Query: 510 IYLH----------------------KYSRLRMNESKVNTNR----VVGTYGYMAPEYAM 543
+LH K + +++ ++ + GT YMAPE
Sbjct: 140 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN 199
Query: 544 NGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLV 582
+ AD +SFGVL+ E+++G D + + ++
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI 238
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Query: 508 GLIYLHKYSRLRMNESKVNTNRVVGTYGYMAPEYAMNGI------VSMKADVFSFGVLLL 561
GL +H S N+ V N VGT YMAPE I + D+++FG++L
Sbjct: 187 GLAVMHSQS---TNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLW 243
Query: 562 EIVSGRKNNNCYDEERP 578
E+ +N ++ +P
Sbjct: 244 EVARRMVSNGIVEDYKP 260
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 83/219 (37%), Gaps = 53/219 (24%)
Query: 416 AATNNFSTTNKLGEGGFGPVYKGKLLDG----QVIAVKRLSGRTIRLMGCSLHGAER-IL 470
A + F LG+G FG V+ K + G Q+ A+K L T+++ ER IL
Sbjct: 22 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDIL 81
Query: 471 V-----------YEFMPNKSLDFFIFDSVKKKQL--NWSKRITIIEG--------IAQGL 509
V Y F L + I D ++ L SK + E +A L
Sbjct: 82 VEVNHPFIVKLHYAFQTEGKL-YLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALAL 140
Query: 510 IYLH----------------------KYSRLRMNESKVNTNR----VVGTYGYMAPEYAM 543
+LH K + +++ ++ + GT YMAPE
Sbjct: 141 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN 200
Query: 544 NGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLV 582
+ AD +SFGVL+ E+++G D + + ++
Sbjct: 201 RRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI 239
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 79/208 (37%), Gaps = 68/208 (32%)
Query: 426 KLGEGGFGPVYKGK---LL---DGQVIAVKRL-----SGR-----------------TIR 457
+LGEG FG V+ + LL D ++AVK L S R +R
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 458 LMGCSLHGAERILVYEFMPNKSLDFFIF------------DSVKKKQLNWSKRITIIEGI 505
G G ++V+E+M + L+ F+ + V L + + + +
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 506 AQGLIYL---HKYSR-LRMNESKVNTNRVV--GTYG----------------------YM 537
A G++YL H R L V VV G +G +M
Sbjct: 168 AAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWM 227
Query: 538 APEYAMNGIVSMKADVFSFGVLLLEIVS 565
PE + + ++DV+SFGV+L EI +
Sbjct: 228 PPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 79/204 (38%), Gaps = 56/204 (27%)
Query: 417 ATNNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRLSGRT-------------------- 455
+ NF K+GEG +G VYK + L G+V+A+K++ T
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 456 ----IRLMGCSLHGAERI-LVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLI 510
++L+ +H ++ LV+EF+ DF ++ L K + + + QGL
Sbjct: 63 HPNIVKLLDV-IHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIK--SYLFQLLQGLA 119
Query: 511 YLHKYSRLRMNESK----VNTN-----------RVVG-----------TYGYMAPEYAMN 544
+ H + L + +NT R G T Y APE +
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 179
Query: 545 -GIVSMKADVFSFGVLLLEIVSGR 567
S D++S G + E+V+ R
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Query: 508 GLIYLHKYSRLRMNESKVNTNRVVGTYGYMAPEYAMNGI------VSMKADVFSFGVLLL 561
GL +H S N+ V N VGT YMAPE I + D+++FG++L
Sbjct: 158 GLAVMHSQS---TNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLW 214
Query: 562 EIVSGRKNNNCYDEERP 578
E+ +N ++ +P
Sbjct: 215 EVARRMVSNGIVEDYKP 231
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Query: 508 GLIYLHKYSRLRMNESKVNTNRVVGTYGYMAPEYAMNGI------VSMKADVFSFGVLLL 561
GL +H S N+ V N VGT YMAPE I + D+++FG++L
Sbjct: 158 GLAVMHSQS---TNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLW 214
Query: 562 EIVSGRKNNNCYDEERP 578
E+ +N ++ +P
Sbjct: 215 EVARRMVSNGIVEDYKP 231
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 79/204 (38%), Gaps = 56/204 (27%)
Query: 417 ATNNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRLSGRT-------------------- 455
+ NF K+GEG +G VYK + L G+V+A+K++ T
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 456 ----IRLMGCSLHGAERI-LVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLI 510
++L+ +H ++ LV+EF+ DF ++ L K + + + QGL
Sbjct: 64 HPNIVKLLDV-IHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIK--SYLFQLLQGLA 120
Query: 511 YLHKYSRLRMNESK----VNTN-----------RVVG-----------TYGYMAPEYAMN 544
+ H + L + +NT R G T Y APE +
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
Query: 545 -GIVSMKADVFSFGVLLLEIVSGR 567
S D++S G + E+V+ R
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 83/219 (37%), Gaps = 53/219 (24%)
Query: 416 AATNNFSTTNKLGEGGFGPVYKGKLLDG----QVIAVKRLSGRTIRLMGCSLHGAER-IL 470
A + F LG+G FG V+ K + G Q+ A+K L T+++ ER IL
Sbjct: 21 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDIL 80
Query: 471 V-----------YEFMPNKSLDFFIFDSVKKKQL--NWSKRITIIEG--------IAQGL 509
V Y F L + I D ++ L SK + E +A L
Sbjct: 81 VEVNHPFIVKLHYAFQTEGKL-YLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALAL 139
Query: 510 IYLH----------------------KYSRLRMNESKVNTNR----VVGTYGYMAPEYAM 543
+LH K + +++ ++ + GT YMAPE
Sbjct: 140 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN 199
Query: 544 NGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLV 582
+ AD +SFGVL+ E+++G D + + ++
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI 238
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 79/208 (37%), Gaps = 68/208 (32%)
Query: 426 KLGEGGFGPVYKGK---LL---DGQVIAVKRL-----SGR-----------------TIR 457
+LGEG FG V+ + LL D ++AVK L S R +R
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 458 LMGCSLHGAERILVYEFMPNKSLDFFIF------------DSVKKKQLNWSKRITIIEGI 505
G G ++V+E+M + L+ F+ + V L + + + +
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 506 AQGLIYL---HKYSR-LRMNESKVNTNRVV--GTYG----------------------YM 537
A G++YL H R L V VV G +G +M
Sbjct: 145 AAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWM 204
Query: 538 APEYAMNGIVSMKADVFSFGVLLLEIVS 565
PE + + ++DV+SFGV+L EI +
Sbjct: 205 PPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 79/198 (39%), Gaps = 60/198 (30%)
Query: 426 KLGEGGFGPVYKGK---LLD--GQVIAVKRLSGRT----------------------IRL 458
+LG+G FG V + L D G+V+AVK+L T ++
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 459 MGCSLHGAER--ILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYL--HK 514
G R L+ EF+P SL ++ K++++ K + I +G+ YL +
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKR 137
Query: 515 YSRLRMNESKV---NTNRV-VGTYG-----------------------YMAPEYAMNGIV 547
Y + + N NRV +G +G + APE
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 197
Query: 548 SMKADVFSFGVLLLEIVS 565
S+ +DV+SFGV+L E+ +
Sbjct: 198 SVASDVWSFGVVLYELFT 215
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 120/331 (36%), Gaps = 70/331 (21%)
Query: 370 VYHAEGRMDQQNQVNELGDSLSTFNGKRRTKDMKHELKGFNFQTIAAATNNFSTTN---K 426
+Y R Q+N + E + +R + + HE Q + + S + K
Sbjct: 24 LYFQGARARQENGMPE--KPPGPRSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIK 81
Query: 427 LGEGGFGPVYKGKLLD-GQVIAVKRLSGR----------------------TIRLMGCSL 463
+GEG G V + G+++AVK++ R + + L
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 464 HGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYS------- 516
G E +V EF+ +L D V ++N + + + Q L LH
Sbjct: 142 VGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 197
Query: 517 ----------RLRMNE-------SKVNTNR--VVGTYGYMAPEYAMNGIVSMKADVFSFG 557
R+++++ SK R +VGT +MAPE + D++S G
Sbjct: 198 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLG 257
Query: 558 VLLLEIVSGRKNNNCYDEERPL--------NLVGYLWKEGKASELMEAALDGPCPENELL 609
++++E+V G Y E PL NL L K S ++ LD +
Sbjct: 258 IMVIEMVDG---EPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQ 314
Query: 610 RCIHAGLLCVHDQAVNRPTMADVVSCLRQNN 640
R A LL H A +V +RQN
Sbjct: 315 RATAAELLK-HPFLAKAGPPASIVPLMRQNR 344
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 417 ATNNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRL 451
+ NF K+GEG +G VYK + L G+V+A+K++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI 36
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 417 ATNNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRL 451
+ NF K+GEG +G VYK + L G+V+A+K++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI 36
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 417 ATNNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRL 451
+ NF K+GEG +G VYK + L G+V+A+K++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI 36
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 417 ATNNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRL 451
+ NF K+GEG +G VYK + L G+V+A+K++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI 36
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 77/197 (39%), Gaps = 60/197 (30%)
Query: 427 LGEGGFGPVYKGKL-LDGQ---VIAVKRL-SGRT----------------------IRLM 459
+G G FG V G L L G+ +A+K L SG T I L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 460 GCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYL----HKY 515
G +++ EFM N SLD F+ + Q + + ++ GIA G+ YL + +
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDSFLRQN--DGQFTVIQLVGMLRGIAAGMKYLADMNYVH 132
Query: 516 SRLRMNESKVNTNRV--VGTYG-------------------------YMAPEYAMNGIVS 548
L VN+N V V +G + APE +
Sbjct: 133 RALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFT 192
Query: 549 MKADVFSFGVLLLEIVS 565
+DV+S+G+++ E++S
Sbjct: 193 SASDVWSYGIVMWEVMS 209
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 417 ATNNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRL 451
+ NF K+GEG +G VYK + L G+V+A+K++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI 37
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 109/287 (37%), Gaps = 71/287 (24%)
Query: 424 TNKLGEGGFGPVYKGKLLDGQVIAVKRLSGRT------IRLMGCSLHGAERILVYEFMPN 477
+ ++G G FG VYKGK + + ++ T R L + + FM
Sbjct: 41 STRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY 100
Query: 478 KSLD-------------FFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESK 524
+ D + V++ + + I I AQG+ YLH + + +
Sbjct: 101 MTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKS 160
Query: 525 VN----------------------------TNRVVGTYGYMAPEYAM---NGIVSMKADV 553
N + G+ +MAPE N S ++DV
Sbjct: 161 NNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDV 220
Query: 554 FSFGVLLLEIVSGR-KNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRCI 612
+S+G++L E+++G ++ + ++ + +VG + S+L + CP+ + R +
Sbjct: 221 YSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKN-----CPK-AMKRLV 274
Query: 613 HAGLLCVHDQAVNRPTMADVVSCLRQNNQHFSSVLLLRSSKVPRINQ 659
CV RP ++ SS+ LL+ S +P+IN+
Sbjct: 275 AD---CVKKVKEERPLFPQIL----------SSIELLQHS-LPKINR 307
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 417 ATNNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRL 451
+ NF K+GEG +G VYK + L G+V+A+K++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI 38
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 417 ATNNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRL 451
+ NF K+GEG +G VYK + L G+V+A+K++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI 38
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 417 ATNNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRL 451
+ NF K+GEG +G VYK + L G+V+A+K++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI 39
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 100/272 (36%), Gaps = 65/272 (23%)
Query: 426 KLGEGGFGPVYKGKLLD-GQVIAVKRLSGR----------------------TIRLMGCS 462
K+GEG G V + G+++AVK++ R + +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 463 LHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYS------ 516
L G E +V EF+ +L D V ++N + + + Q L LH
Sbjct: 218 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDI 273
Query: 517 -----------RLRMNE-------SKVNTNR--VVGTYGYMAPEYAMNGIVSMKADVFSF 556
R+++++ SK R +VGT +MAPE + D++S
Sbjct: 274 KSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSL 333
Query: 557 GVLLLEIVSGRKNNNCYDEERPL--------NLVGYLWKEGKASELMEAALDGPCPENEL 608
G++++E+V G Y E PL NL L K S ++ LD +
Sbjct: 334 GIMVIEMVDG---EPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPA 390
Query: 609 LRCIHAGLLCVHDQAVNRPTMADVVSCLRQNN 640
R A LL H A +V +RQN
Sbjct: 391 QRATAAELLK-HPFLAKAGPPASIVPLMRQNR 421
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 417 ATNNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRL 451
+ NF K+GEG +G VYK + L G+V+A+K++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI 37
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 417 ATNNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRL 451
+ NF K+GEG +G VYK + L G+V+A+K++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI 37
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 417 ATNNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRL 451
+ NF K+GEG +G VYK + L G+V+A+K++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI 37
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 419 NNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRL 451
NF K+GEG +G VYK + L G+V+A+K++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI 35
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 417 ATNNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRL 451
+ NF K+GEG +G VYK + L G+V+A+K++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI 39
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 417 ATNNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRL 451
+ NF K+GEG +G VYK + L G+V+A+K++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI 38
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 111/305 (36%), Gaps = 68/305 (22%)
Query: 396 KRRTKDMKHELKGFNFQTIAAATNNFSTTN---KLGEGGFGPVYKGKLLD-GQVIAVKRL 451
+R + + HE Q + + S + K+GEG G V + G+++AVK++
Sbjct: 5 QREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM 64
Query: 452 SGR----------------------TIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVK 489
R + + L G E +V EF+ +L D V
Sbjct: 65 DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT----DIVT 120
Query: 490 KKQLNWSKRITIIEGIAQGLIYLHKYS-----------------RLRMNE-------SKV 525
++N + + + Q L LH R+++++ SK
Sbjct: 121 HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 180
Query: 526 NTNR--VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPL---- 579
R +VGT +MAPE + D++S G++++E+V G Y E PL
Sbjct: 181 VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP---YFNEPPLKAMK 237
Query: 580 ----NLVGYLWKEGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635
NL L K S ++ LD + R A LL H A +V
Sbjct: 238 MIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK-HPFLAKAGPPASIVPL 296
Query: 636 LRQNN 640
+RQN
Sbjct: 297 MRQNR 301
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 417 ATNNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRL 451
+ NF K+GEG +G VYK + L G+V+A+K++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI 39
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 419 NNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRL 451
NF K+GEG +G VYK + L G+V+A+K++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI 36
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 419 NNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRL 451
NF K+GEG +G VYK + L G+V+A+K++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI 36
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 419 NNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRL 451
NF K+GEG +G VYK + L G+V+A+K++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI 35
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 90/243 (37%), Gaps = 66/243 (27%)
Query: 377 MDQQNQVNELGDSLSTFNGKRRTK-DMKHELKGFNFQTIAAATNNFSTTNKLGEGGFGPV 435
MD+Q+Q + G + F ++ + DM G+N T+A NF K+G G F V
Sbjct: 1 MDEQSQGMQ-GPPVPQFQPQKALRPDM-----GYN--TLA----NFRIEKKIGRGQFSEV 48
Query: 436 YKGK-LLDGQVIAVKRLS-------------------------GRTIRLMGCSLHGAERI 469
Y+ LLDG +A+K++ I+ + E
Sbjct: 49 YRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELN 108
Query: 470 LVYEFMPNKSLDFFIFDSVKKKQL-----NWSKRITIIEGI------------------- 505
+V E L I K+K+L W + + +
Sbjct: 109 IVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVF 168
Query: 506 --AQGLIYLHKYSRLRMNESKVNT-NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLE 562
A G++ L R SK + +VGT YM+PE + K+D++S G LL E
Sbjct: 169 ITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYE 228
Query: 563 IVS 565
+ +
Sbjct: 229 MAA 231
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 417 ATNNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRL 451
+ NF K+GEG +G VYK + L G+V+A+K++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI 39
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 419 NNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRL 451
NF K+GEG +G VYK + L G+V+A+K++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI 35
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 419 NNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRL 451
NF K+GEG +G VYK + L G+V+A+K++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI 35
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 419 NNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRL 451
NF K+GEG +G VYK + L G+V+A+K++
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI 40
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 417 ATNNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRL 451
+ NF K+GEG +G VYK + L G+V+A+K++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI 39
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 419 NNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRL 451
NF K+GEG +G VYK + L G+V+A+K++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI 35
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 417 ATNNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRL 451
+ NF K+GEG +G VYK + L G+V+A+K++
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI 40
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 419 NNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRL 451
NF K+GEG +G VYK + L G+V+A+K++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI 36
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 111/305 (36%), Gaps = 68/305 (22%)
Query: 396 KRRTKDMKHELKGFNFQTIAAATNNFSTTN---KLGEGGFGPVYKGKLLD-GQVIAVKRL 451
+R + + HE Q + + S + K+GEG G V + G+++AVK++
Sbjct: 3 QREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM 62
Query: 452 SGR----------------------TIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVK 489
R + + L G E +V EF+ +L D V
Sbjct: 63 DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT----DIVT 118
Query: 490 KKQLNWSKRITIIEGIAQGLIYLHKYS-----------------RLRMNE-------SKV 525
++N + + + Q L LH R+++++ SK
Sbjct: 119 HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 178
Query: 526 NTNR--VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPL---- 579
R +VGT +MAPE + D++S G++++E+V G Y E PL
Sbjct: 179 VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP---YFNEPPLKAMK 235
Query: 580 ----NLVGYLWKEGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635
NL L K S ++ LD + R A LL H A +V
Sbjct: 236 MIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK-HPFLAKAGPPASIVPL 294
Query: 636 LRQNN 640
+RQN
Sbjct: 295 MRQNR 299
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 419 NNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRL 451
NF K+GEG +G VYK + L G+V+A+K++
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI 37
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 419 NNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRL 451
NF K+GEG +G VYK + L G+V+A+K++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI 36
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 419 NNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRL 451
NF K+GEG +G VYK + L G+V+A+K++
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI 43
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 419 NNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRL 451
NF K+GEG +G VYK + L G+V+A+K++
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI 43
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 531 VGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIV 564
VGT YM+PE S K D+FS G++L E++
Sbjct: 191 VGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 532 GTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLV 582
GT YMAPE S AD +S+GVL+ E+++G D + + L+
Sbjct: 192 GTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLI 242
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 100/272 (36%), Gaps = 65/272 (23%)
Query: 426 KLGEGGFGPVYKGKLLD-GQVIAVKRLSGR----------------------TIRLMGCS 462
K+GEG G V + G+++AVK++ R + +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 463 LHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYS------ 516
L G E +V EF+ +L D V ++N + + + Q L LH
Sbjct: 91 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDI 146
Query: 517 -----------RLRMNE-------SKVNTNR--VVGTYGYMAPEYAMNGIVSMKADVFSF 556
R+++++ SK R +VGT +MAPE + D++S
Sbjct: 147 KSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSL 206
Query: 557 GVLLLEIVSGRKNNNCYDEERPL--------NLVGYLWKEGKASELMEAALDGPCPENEL 608
G++++E+V G Y E PL NL L K S ++ LD +
Sbjct: 207 GIMVIEMVDGEPP---YFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPA 263
Query: 609 LRCIHAGLLCVHDQAVNRPTMADVVSCLRQNN 640
R A LL H A +V +RQN
Sbjct: 264 QRATAAELLK-HPFLAKAGPPASIVPLMRQNR 294
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 80/211 (37%), Gaps = 44/211 (20%)
Query: 461 CSLHGAERI-LVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLR 519
C+ G I L+ EF+P+ SL ++ K ++N +++ I +G+ YL +
Sbjct: 80 CTEDGGNGIKLIMEFLPSGSLKEYL--PKNKNKINLKQQLKYAVQICKGMDYLGSRQYVH 137
Query: 520 MNESKVNT------NRVVGTYG-----------------------YMAPEYAMNGIVSMK 550
+ + N +G +G + APE M +
Sbjct: 138 RDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIA 197
Query: 551 ADVFSFGVLLLEIVSGRKNNNCYDEERP----LNLVGYLWKEGKASELMEAALDG---PC 603
+DV+SFGV L E+++ C + P L ++G + + L+ +G PC
Sbjct: 198 SDVWSFGVTLHELLT-----YCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPC 252
Query: 604 PENELLRCIHAGLLCVHDQAVNRPTMADVVS 634
P N C Q NR + +++
Sbjct: 253 PPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 283
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 100/272 (36%), Gaps = 65/272 (23%)
Query: 426 KLGEGGFGPVYKGKLLD-GQVIAVKRLSGR----------------------TIRLMGCS 462
K+GEG G V + G+++AVK++ R + +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 463 LHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYS------ 516
L G E +V EF+ +L D V ++N + + + Q L LH
Sbjct: 87 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDI 142
Query: 517 -----------RLRMNE-------SKVNTNR--VVGTYGYMAPEYAMNGIVSMKADVFSF 556
R+++++ SK R +VGT +MAPE + D++S
Sbjct: 143 KSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSL 202
Query: 557 GVLLLEIVSGRKNNNCYDEERPL--------NLVGYLWKEGKASELMEAALDGPCPENEL 608
G++++E+V G Y E PL NL L K S ++ LD +
Sbjct: 203 GIMVIEMVDGEPP---YFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPA 259
Query: 609 LRCIHAGLLCVHDQAVNRPTMADVVSCLRQNN 640
R A LL H A +V +RQN
Sbjct: 260 QRATAAELLK-HPFLAKAGPPASIVPLMRQNR 290
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 531 VGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIV 564
VGT YM+PE S K D+FS G++L E++
Sbjct: 237 VGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 80/211 (37%), Gaps = 44/211 (20%)
Query: 461 CSLHGAERI-LVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLR 519
C+ G I L+ EF+P+ SL ++ K ++N +++ I +G+ YL +
Sbjct: 92 CTEDGGNGIKLIMEFLPSGSLKEYL--PKNKNKINLKQQLKYAVQICKGMDYLGSRQYVH 149
Query: 520 MNESKVNT------NRVVGTYG-----------------------YMAPEYAMNGIVSMK 550
+ + N +G +G + APE M +
Sbjct: 150 RDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIA 209
Query: 551 ADVFSFGVLLLEIVSGRKNNNCYDEERP----LNLVGYLWKEGKASELMEAALDG---PC 603
+DV+SFGV L E+++ C + P L ++G + + L+ +G PC
Sbjct: 210 SDVWSFGVTLHELLT-----YCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPC 264
Query: 604 PENELLRCIHAGLLCVHDQAVNRPTMADVVS 634
P N C Q NR + +++
Sbjct: 265 PPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 295
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + I + ++DV+SFGVLL EI +
Sbjct: 203 WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 525 VNTNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEE 576
V T GT Y+APE D ++FGVLL E+++G+ DE+
Sbjct: 497 VTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED 548
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + I + ++DV+SFGVLL EI +
Sbjct: 207 WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 81/201 (40%), Gaps = 56/201 (27%)
Query: 419 NNFSTTNKLGEGGFGPVYKGKLLDGQVIAVKRL------------SGRTIRLMGCSLHG- 465
+ K+GEG +G VYK K G+++A+KR+ + R I L+ H
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 466 ---------AER--ILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK 514
+ER LV+EFM K L + ++ K L S+ + + +G+ + H+
Sbjct: 81 IVSLIDVIHSERCLTLVFEFM-EKDLKKVLDEN--KTGLQDSQIKIYLYQLLRGVAHCHQ 137
Query: 515 YSRLRMNESKVN---------------------------TNRVVGTYGYMAPEYAM-NGI 546
+ L + N T+ VV T Y AP+ M +
Sbjct: 138 HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKK 196
Query: 547 VSMKADVFSFGVLLLEIVSGR 567
S D++S G + E+++G+
Sbjct: 197 YSTSVDIWSIGCIFAEMITGK 217
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + I + ++DV+SFGVLL EI +
Sbjct: 211 WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + I + ++DV+SFGVLL EI +
Sbjct: 210 WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + I + ++DV+SFGVLL EI +
Sbjct: 218 WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + + ++++DV+S+G+LL EI S
Sbjct: 232 WMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + + ++++DV+S+G+LL EI S
Sbjct: 234 WMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + I + ++DV+SFGVLL EI +
Sbjct: 218 WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + I + ++DV+SFGVLL EI +
Sbjct: 218 WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + + ++++DV+S+G+LL EI S
Sbjct: 228 WMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + + ++++DV+S+G+LL EI S
Sbjct: 232 WMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 531 VGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSG 566
VGT Y+APE ++ D +SFG L E ++G
Sbjct: 185 VGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 531 VGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSG 566
VGT Y+APE ++ D +SFG L E ++G
Sbjct: 184 VGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + + ++++DV+S+G+LL EI S
Sbjct: 220 WMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 78/198 (39%), Gaps = 60/198 (30%)
Query: 426 KLGEGGFGPVYKGK---LLD--GQVIAVKRLSGRT----------------------IRL 458
+LG+G FG V + L D G+V+AVK+L T ++
Sbjct: 18 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 77
Query: 459 MGCSLHGAER--ILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYS 516
G R L+ E++P SL ++ K++++ K + I +G+ YL
Sbjct: 78 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKR 135
Query: 517 RLRMNESKVNT-----NRV-VGTYG-----------------------YMAPEYAMNGIV 547
+ N + N NRV +G +G + APE
Sbjct: 136 YIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKF 195
Query: 548 SMKADVFSFGVLLLEIVS 565
S+ +DV+SFGV+L E+ +
Sbjct: 196 SVASDVWSFGVVLYELFT 213
>pdb|3SM9|A Chain A, Crystal Structure Of Metabotropic Glutamate Receptor 3
Precursor In Presence Of Ly341495 Antagonist
Length = 479
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 21/27 (77%)
Query: 140 LQSGNFVLQEMNSDDTLLPGMKIGINL 166
L++ F + E+N DD LLPG+K+G+++
Sbjct: 44 LEAMLFAIDEINKDDYLLPGVKLGVHI 70
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + I + ++DV+SFGVLL EI +
Sbjct: 218 WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 79/198 (39%), Gaps = 60/198 (30%)
Query: 426 KLGEGGFGPVYKGK---LLD--GQVIAVKRLSGRT----------------------IRL 458
+LG+G FG V + L D G+V+AVK+L T ++
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 459 MGCSLHGAER--ILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYL--HK 514
G R L+ E++P SL ++ K++++ K + I +G+ YL +
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKR 137
Query: 515 YSRLRMNESKV---NTNRV-VGTYG-----------------------YMAPEYAMNGIV 547
Y + + N NRV +G +G + APE
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 197
Query: 548 SMKADVFSFGVLLLEIVS 565
S+ +DV+SFGV+L E+ +
Sbjct: 198 SVASDVWSFGVVLYELFT 215
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 81/201 (40%), Gaps = 56/201 (27%)
Query: 419 NNFSTTNKLGEGGFGPVYKGKLLDGQVIAVKRL------------SGRTIRLMGCSLHG- 465
+ K+GEG +G VYK K G+++A+KR+ + R I L+ H
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 466 ---------AER--ILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK 514
+ER LV+EFM K L + ++ K L S+ + + +G+ + H+
Sbjct: 81 IVSLIDVIHSERCLTLVFEFM-EKDLKKVLDEN--KTGLQDSQIKIYLYQLLRGVAHCHQ 137
Query: 515 YSRLRMNESKVN---------------------------TNRVVGTYGYMAPEYAM-NGI 546
+ L + N T+ VV T Y AP+ M +
Sbjct: 138 HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKK 196
Query: 547 VSMKADVFSFGVLLLEIVSGR 567
S D++S G + E+++G+
Sbjct: 197 YSTSVDIWSIGCIFAEMITGK 217
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + I + ++DV+SFGVLL EI +
Sbjct: 259 WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 79/198 (39%), Gaps = 60/198 (30%)
Query: 426 KLGEGGFGPVYKGK---LLD--GQVIAVKRLSGRT----------------------IRL 458
+LG+G FG V + L D G+V+AVK+L T ++
Sbjct: 24 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 83
Query: 459 MGCSLHGAER--ILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYL--HK 514
G R L+ E++P SL ++ K++++ K + I +G+ YL +
Sbjct: 84 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKR 141
Query: 515 YSRLRMNESKV---NTNRV-VGTYG-----------------------YMAPEYAMNGIV 547
Y + + N NRV +G +G + APE
Sbjct: 142 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 201
Query: 548 SMKADVFSFGVLLLEIVS 565
S+ +DV+SFGV+L E+ +
Sbjct: 202 SVASDVWSFGVVLYELFT 219
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 425 NKLGEGGFGPVYKGK---LLD--GQVIAVKRLSGRT----------------------IR 457
+LG+G FG V + L D G+V+AVK+L T ++
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 458 LMGCSLHGAER--ILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYL--H 513
G R L+ E++P SL ++ K++++ K + I +G+ YL
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTK 164
Query: 514 KYSRLRMNESKV---NTNRV-VGTYG-----------------------YMAPEYAMNGI 546
+Y + + N NRV +G +G + APE
Sbjct: 165 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 224
Query: 547 VSMKADVFSFGVLLLEIVS 565
S+ +DV+SFGV+L E+ +
Sbjct: 225 FSVASDVWSFGVVLYELFT 243
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 79/198 (39%), Gaps = 60/198 (30%)
Query: 426 KLGEGGFGPVYKGK---LLD--GQVIAVKRLSGRT----------------------IRL 458
+LG+G FG V + L D G+V+AVK+L T ++
Sbjct: 22 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 81
Query: 459 MGCSLHGAER--ILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYL--HK 514
G R L+ E++P SL ++ K++++ K + I +G+ YL +
Sbjct: 82 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKR 139
Query: 515 YSRLRMNESKV---NTNRV-VGTYG-----------------------YMAPEYAMNGIV 547
Y + + N NRV +G +G + APE
Sbjct: 140 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 199
Query: 548 SMKADVFSFGVLLLEIVS 565
S+ +DV+SFGV+L E+ +
Sbjct: 200 SVASDVWSFGVVLYELFT 217
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + + ++++DV+S+G+LL EI S
Sbjct: 226 WMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 79/198 (39%), Gaps = 60/198 (30%)
Query: 426 KLGEGGFGPVYKGK---LLD--GQVIAVKRLSGRT----------------------IRL 458
+LG+G FG V + L D G+V+AVK+L T ++
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 459 MGCSLHGAER--ILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYL--HK 514
G R L+ E++P SL ++ K++++ K + I +G+ YL +
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 515 YSRLRMNESKV---NTNRV-VGTYG-----------------------YMAPEYAMNGIV 547
Y + + N NRV +G +G + APE
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 194
Query: 548 SMKADVFSFGVLLLEIVS 565
S+ +DV+SFGV+L E+ +
Sbjct: 195 SVASDVWSFGVVLYELFT 212
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 79/198 (39%), Gaps = 60/198 (30%)
Query: 426 KLGEGGFGPVYKGK---LLD--GQVIAVKRLSGRT----------------------IRL 458
+LG+G FG V + L D G+V+AVK+L T ++
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 459 MGCSLHGAER--ILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYL--HK 514
G R L+ E++P SL ++ K++++ K + I +G+ YL +
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 515 YSRLRMNESKV---NTNRV-VGTYG-----------------------YMAPEYAMNGIV 547
Y + + N NRV +G +G + APE
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKF 194
Query: 548 SMKADVFSFGVLLLEIVS 565
S+ +DV+SFGV+L E+ +
Sbjct: 195 SVASDVWSFGVVLYELFT 212
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 425 NKLGEGGFGPVYKGK---LLD--GQVIAVKRLSGRT----------------------IR 457
+LG+G FG V + L D G+V+AVK+L T ++
Sbjct: 20 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 79
Query: 458 LMGCSLHGAER--ILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYL--H 513
G R L+ E++P SL ++ K++++ K + I +G+ YL
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTK 137
Query: 514 KYSRLRMNESKV---NTNRV-VGTYG-----------------------YMAPEYAMNGI 546
+Y + + N NRV +G +G + APE
Sbjct: 138 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 197
Query: 547 VSMKADVFSFGVLLLEIVS 565
S+ +DV+SFGV+L E+ +
Sbjct: 198 FSVASDVWSFGVVLYELFT 216
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 79/198 (39%), Gaps = 60/198 (30%)
Query: 426 KLGEGGFGPVYKGK---LLD--GQVIAVKRLSGRT----------------------IRL 458
+LG+G FG V + L D G+V+AVK+L T ++
Sbjct: 16 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 75
Query: 459 MGCSLHGAER--ILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYL--HK 514
G R L+ E++P SL ++ K++++ K + I +G+ YL +
Sbjct: 76 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKR 133
Query: 515 YSRLRMNESKV---NTNRV-VGTYG-----------------------YMAPEYAMNGIV 547
Y + + N NRV +G +G + APE
Sbjct: 134 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 193
Query: 548 SMKADVFSFGVLLLEIVS 565
S+ +DV+SFGV+L E+ +
Sbjct: 194 SVASDVWSFGVVLYELFT 211
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 528 NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWK 587
+ +VGT +MAPE K D++S G++ +E++ G Y E PL + YL
Sbjct: 174 SEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP---YLNENPLRAL-YLIA 229
Query: 588 EGKASEL 594
EL
Sbjct: 230 TNGTPEL 236
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 79/199 (39%), Gaps = 60/199 (30%)
Query: 425 NKLGEGGFGPVYKGK---LLD--GQVIAVKRLSGRT----------------------IR 457
+LG+G FG V + L D G+V+AVK+L T ++
Sbjct: 14 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 458 LMGCSLHGAER--ILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYL--H 513
G R L+ E++P SL ++ K++++ K + I +G+ YL
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTK 131
Query: 514 KYSRLRMNESKV---NTNRV-VGTYG-----------------------YMAPEYAMNGI 546
+Y + + N NRV +G +G + APE
Sbjct: 132 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 191
Query: 547 VSMKADVFSFGVLLLEIVS 565
S+ +DV+SFGV+L E+ +
Sbjct: 192 FSVASDVWSFGVVLYELFT 210
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 79/198 (39%), Gaps = 60/198 (30%)
Query: 426 KLGEGGFGPVYKGK---LLD--GQVIAVKRLSGRT----------------------IRL 458
+LG+G FG V + L D G+V+AVK+L T ++
Sbjct: 23 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 82
Query: 459 MGCSLHGAER--ILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYL--HK 514
G R L+ E++P SL ++ K++++ K + I +G+ YL +
Sbjct: 83 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKR 140
Query: 515 YSRLRMNESKV---NTNRV-VGTYG-----------------------YMAPEYAMNGIV 547
Y + + N NRV +G +G + APE
Sbjct: 141 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 200
Query: 548 SMKADVFSFGVLLLEIVS 565
S+ +DV+SFGV+L E+ +
Sbjct: 201 SVASDVWSFGVVLYELFT 218
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 79/198 (39%), Gaps = 60/198 (30%)
Query: 426 KLGEGGFGPVYKGK---LLD--GQVIAVKRLSGRT----------------------IRL 458
+LG+G FG V + L D G+V+AVK+L T ++
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 459 MGCSLHGAER--ILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYL--HK 514
G R L+ E++P SL ++ K++++ K + I +G+ YL +
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 515 YSRLRMNESKV---NTNRV-VGTYG-----------------------YMAPEYAMNGIV 547
Y + + N NRV +G +G + APE
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 194
Query: 548 SMKADVFSFGVLLLEIVS 565
S+ +DV+SFGV+L E+ +
Sbjct: 195 SVASDVWSFGVVLYELFT 212
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 530 VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEG 589
+VGT +MAPE K D++S G++ +E++ G Y E PL + YL
Sbjct: 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP---YLNENPLRAL-YLIATN 231
Query: 590 KASEL 594
EL
Sbjct: 232 GTPEL 236
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 530 VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEG 589
+VGT +MAPE K D++S G++ +E++ G Y E PL + YL
Sbjct: 177 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP---YLNENPLRAL-YLIATN 232
Query: 590 KASEL 594
EL
Sbjct: 233 GTPEL 237
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 530 VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEG 589
+VGT +MAPE K D++S G++ +E++ G Y E PL + YL
Sbjct: 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP---YLNENPLRAL-YLIATN 231
Query: 590 KASEL 594
EL
Sbjct: 232 GTPEL 236
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 530 VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEG 589
+VGT +MAPE K D++S G++ +E++ G Y E PL + YL
Sbjct: 177 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP---YLNENPLRAL-YLIATN 232
Query: 590 KASEL 594
EL
Sbjct: 233 GTPEL 237
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 525 VNTNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEE 576
V T GT Y+APE D ++FGVLL E+++G+ DE+
Sbjct: 176 VTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED 227
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 76/198 (38%), Gaps = 52/198 (26%)
Query: 419 NNFSTTNKLGEGGFGPVYK-----------GKLLDGQVIAVKRLSGRTIRLMGC------ 461
+++ +LG G FG V++ K + + K + I+ M
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 462 -SLHGA-----ERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK- 514
+LH A E +++YEFM L + D K ++ + + + + +GL ++H+
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK--MSEDEAVEYMRQVCKGLCHMHEN 168
Query: 515 -------------YSRLRMNESKV-------------NTNRVVGTYGYMAPEYAMNGIVS 548
++ R NE K+ + GT + APE A V
Sbjct: 169 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVG 228
Query: 549 MKADVFSFGVLLLEIVSG 566
D++S GVL ++SG
Sbjct: 229 YYTDMWSVGVLSYILLSG 246
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 525 VNTNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEE 576
V T GT Y+APE D +++GVLL E+++G+ + DE+
Sbjct: 175 VTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED 226
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 79/198 (39%), Gaps = 60/198 (30%)
Query: 426 KLGEGGFGPVYKGK---LLD--GQVIAVKRLSGRT----------------------IRL 458
+LG+G FG V + L D G+V+AVK+L T ++
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 459 MGCSLHGAER--ILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYL--HK 514
G R L+ E++P SL ++ K++++ K + I +G+ YL +
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKR 152
Query: 515 YSRLRMNESKV---NTNRV-VGTYG-----------------------YMAPEYAMNGIV 547
Y + + N NRV +G +G + APE
Sbjct: 153 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 212
Query: 548 SMKADVFSFGVLLLEIVS 565
S+ +DV+SFGV+L E+ +
Sbjct: 213 SVASDVWSFGVVLYELFT 230
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 57/218 (26%)
Query: 420 NFSTTNKLGEGGFGPVYKG--------KLLD------GQVIAVKRLSG--RTIR------ 457
+ ++G G FG VYKG K+L+ Q+ A K G R R
Sbjct: 25 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 84
Query: 458 LMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSR 517
MG S + +V ++ SL + S K ++ K I I A+G+ YLH S
Sbjct: 85 FMGYST-APQLAIVTQWCEGSSLYHHLHASETKFEMK--KLIDIARQTARGMDYLHAKSI 141
Query: 518 LRMNESKVNT-----NRV-VGTYG----------------------YMAPEYAM---NGI 546
+ + N N V +G +G +MAPE +
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 547 VSMKADVFSFGVLLLEIVSGR-KNNNCYDEERPLNLVG 583
S ++DV++FG++L E+++G+ +N + ++ + +VG
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVG 239
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELM 595
+MA E + K+DV+SFGVLL E+++ + Y + ++ YL + L+
Sbjct: 201 WMALESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLL---QGRRLL 255
Query: 596 EAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634
+ P P E++ L C H +A RP+ +++VS
Sbjct: 256 QPEY-CPDPLYEVM------LKCWHPKAEMRPSFSELVS 287
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 76/198 (38%), Gaps = 52/198 (26%)
Query: 419 NNFSTTNKLGEGGFGPVYK-----------GKLLDGQVIAVKRLSGRTIRLMGC------ 461
+++ +LG G FG V++ K + + K + I+ M
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 462 -SLHGA-----ERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK- 514
+LH A E +++YEFM L + D K ++ + + + + +GL ++H+
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK--MSEDEAVEYMRQVCKGLCHMHEN 274
Query: 515 -------------YSRLRMNESKV-------------NTNRVVGTYGYMAPEYAMNGIVS 548
++ R NE K+ + GT + APE A V
Sbjct: 275 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVG 334
Query: 549 MKADVFSFGVLLLEIVSG 566
D++S GVL ++SG
Sbjct: 335 YYTDMWSVGVLSYILLSG 352
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 79/198 (39%), Gaps = 60/198 (30%)
Query: 426 KLGEGGFGPVYKGK---LLD--GQVIAVKRLSGRT----------------------IRL 458
+LG+G FG V + L D G+V+AVK+L T ++
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 459 MGCSLHGAER--ILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYL--HK 514
G R L+ E++P SL ++ K++++ K + I +G+ YL +
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTKR 152
Query: 515 YSRLRMNESKV---NTNRV-VGTYG-----------------------YMAPEYAMNGIV 547
Y + + N NRV +G +G + APE
Sbjct: 153 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 212
Query: 548 SMKADVFSFGVLLLEIVS 565
S+ +DV+SFGV+L E+ +
Sbjct: 213 SVASDVWSFGVVLYELFT 230
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELM 595
+MA E + K+DV+SFGVLL E+++ + Y + ++ YL + L+
Sbjct: 198 WMALESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLL---QGRRLL 252
Query: 596 EAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634
+ P P E++ L C H +A RP+ +++VS
Sbjct: 253 QPEY-CPDPLYEVM------LKCWHPKAEMRPSFSELVS 284
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 70/179 (39%), Gaps = 48/179 (26%)
Query: 493 LNWSKRITIIEGIAQGLIYLHKYSRLRMNESK---------------------------V 525
L+ S TI+ + +GL YLHK ++ + +
Sbjct: 118 LDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDI 177
Query: 526 NTNRV----VGTYGYMAPEYAMNGI--VSMKADVFSFGVLLLEIVSGRKNNNCYDEERPL 579
N+V VGT +MAPE M + KAD++SFG+ +E+ +G + Y P+
Sbjct: 178 TRNKVRKTFVGTPCWMAPE-VMEQVRGYDFKADIWSFGITAIELATGAAPYHKYP---PM 233
Query: 580 NLVGYLWKEGKASELMEAALDGPCPENELLRCIHAGL-----LCVHDQAVNRPTMADVV 633
++ + S L+ + E+L+ LC+ RPT A+++
Sbjct: 234 KVLMLTLQNDPPS------LETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 286
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELM 595
+MA E + K+DV+SFGVLL E+++ + Y + ++ YL + L+
Sbjct: 195 WMALESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLL---QGRRLL 249
Query: 596 EAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634
+ P P E++ L C H +A RP+ +++VS
Sbjct: 250 QPEY-CPDPLYEVM------LKCWHPKAEMRPSFSELVS 281
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELM 595
+MA E + K+DV+SFGVLL E+++ + Y + ++ YL + L+
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLL---QGRRLL 257
Query: 596 EAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634
+ P P E++ L C H +A RP+ +++VS
Sbjct: 258 QPEY-CPDPLYEVM------LKCWHPKAEMRPSFSELVS 289
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELM 595
+MA E + K+DV+SFGVLL E+++ + Y + ++ YL + L+
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLL---QGRRLL 257
Query: 596 EAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634
+ P P E++ L C H +A RP+ +++VS
Sbjct: 258 QPEY-CPDPLYEVM------LKCWHPKAEMRPSFSELVS 289
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELM 595
+MA E + K+DV+SFGVLL E+++ + Y + ++ YL + L+
Sbjct: 202 WMALESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLL---QGRRLL 256
Query: 596 EAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634
+ P P E++ L C H +A RP+ +++VS
Sbjct: 257 QPEY-CPDPLYEVM------LKCWHPKAEMRPSFSELVS 288
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Query: 420 NFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKR-LSGRTIR 457
+++ T +G G FG VY+ KL D G+++A+K+ L G+ +
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK 60
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELM 595
+MA E + K+DV+SFGVLL E+++ + Y + ++ YL + L+
Sbjct: 202 WMALESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLL---QGRRLL 256
Query: 596 EAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634
+ P P E++ L C H +A RP+ +++VS
Sbjct: 257 QPEY-CPDPLYEVM------LKCWHPKAEMRPSFSELVS 288
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 32.3 bits (72), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Query: 420 NFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKR-LSGRTIR 457
+++ T +G G FG VY+ KL D G+++A+K+ L G+ +
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK 60
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 32.3 bits (72), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELM 595
+MA E + K+DV+SFGVLL E+++ + Y + ++ YL + L+
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLL---QGRRLL 257
Query: 596 EAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634
+ P P E++ L C H +A RP+ +++VS
Sbjct: 258 QPEY-CPDPLYEVM------LKCWHPKAEMRPSFSELVS 289
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELM 595
+MA E + K+DV+SFGVLL E+++ + Y + ++ YL + L+
Sbjct: 204 WMALESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLL---QGRRLL 258
Query: 596 EAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634
+ P P E++ L C H +A RP+ +++VS
Sbjct: 259 QPEY-CPDPLYEVM------LKCWHPKAEMRPSFSELVS 290
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Query: 420 NFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKR-LSGRTIR 457
+++ T +G G FG VY+ KL D G+++A+K+ L G+ +
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK 60
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 7/47 (14%)
Query: 420 NFSTTNKLGEGGFGPVYKGKLLD-GQVIAV------KRLSGRTIRLM 459
+++ T +G G FG VY+ KL D G+++A+ KR R +++M
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIM 95
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELM 595
+MA E + K+DV+SFGVLL E+++ + Y + ++ YL + L+
Sbjct: 222 WMALESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLL---QGRRLL 276
Query: 596 EAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634
+ P P E++ L C H +A RP+ +++VS
Sbjct: 277 QPEY-CPDPLYEVM------LKCWHPKAEMRPSFSELVS 308
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 7/47 (14%)
Query: 420 NFSTTNKLGEGGFGPVYKGKLLD-GQVIAV------KRLSGRTIRLM 459
+++ T +G G FG VY+ KL D G+++A+ KR R +++M
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIM 67
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELM 595
+MA E + K+DV+SFGVLL E+++ + Y + ++ YL + L+
Sbjct: 208 WMALESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLL---QGRRLL 262
Query: 596 EAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634
+ P P E++ L C H +A RP+ +++VS
Sbjct: 263 QPEY-CPDPLYEVM------LKCWHPKAEMRPSFSELVS 294
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 7/47 (14%)
Query: 420 NFSTTNKLGEGGFGPVYKGKLLD-GQVIAV------KRLSGRTIRLM 459
+++ T +G G FG VY+ KL D G+++A+ KR R +++M
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIM 67
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 7/47 (14%)
Query: 420 NFSTTNKLGEGGFGPVYKGKLLD-GQVIAV------KRLSGRTIRLM 459
+++ T +G G FG VY+ KL D G+++A+ KR R +++M
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIM 86
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 7/47 (14%)
Query: 420 NFSTTNKLGEGGFGPVYKGKLLD-GQVIAV------KRLSGRTIRLM 459
+++ T +G G FG VY+ KL D G+++A+ KR R +++M
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIM 75
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELM 595
+MA E + K+DV+SFGVLL E+++ + Y + ++ YL + L+
Sbjct: 204 WMALESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLL---QGRRLL 258
Query: 596 EAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634
+ P P E++ L C H +A RP+ +++VS
Sbjct: 259 QPEY-CPDPLYEVM------LKCWHPKAEMRPSFSELVS 290
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELM 595
+MA E + K+DV+SFGVLL E+++ + Y + ++ YL + L+
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLL---QGRRLL 257
Query: 596 EAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634
+ P P E++ L C H +A RP+ +++VS
Sbjct: 258 QPEY-CPDPLYEVM------LKCWHPKAEMRPSFSELVS 289
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELM 595
+MA E + K+DV+SFGVLL E+++ + Y + ++ YL + L+
Sbjct: 221 WMALESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLL---QGRRLL 275
Query: 596 EAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634
+ P P E++ L C H +A RP+ +++VS
Sbjct: 276 QPEY-CPDPLYEVM------LKCWHPKAEMRPSFSELVS 307
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 7/47 (14%)
Query: 420 NFSTTNKLGEGGFGPVYKGKLLD-GQVIAV------KRLSGRTIRLM 459
+++ T +G G FG VY+ KL D G+++A+ KR R +++M
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIM 80
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELM 595
+MA E + K+DV+SFGVLL E+++ + Y + ++ YL + L+
Sbjct: 201 WMALESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLL---QGRRLL 255
Query: 596 EAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634
+ P P E++ L C H +A RP+ +++VS
Sbjct: 256 QPEY-CPDPLYEVM------LKCWHPKAEMRPSFSELVS 287
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELM 595
+MA E + K+DV+SFGVLL E+++ + Y + ++ YL + L+
Sbjct: 200 WMALESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLL---QGRRLL 254
Query: 596 EAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634
+ P P E++ L C H +A RP+ +++VS
Sbjct: 255 QPEY-CPDPLYEVM------LKCWHPKAEMRPSFSELVS 286
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 7/47 (14%)
Query: 420 NFSTTNKLGEGGFGPVYKGKLLD-GQVIAV------KRLSGRTIRLM 459
+++ T +G G FG VY+ KL D G+++A+ KR R +++M
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIM 67
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 7/47 (14%)
Query: 420 NFSTTNKLGEGGFGPVYKGKLLD-GQVIAV------KRLSGRTIRLM 459
+++ T +G G FG VY+ KL D G+++A+ KR R +++M
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIM 68
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 7/47 (14%)
Query: 420 NFSTTNKLGEGGFGPVYKGKLLD-GQVIAV------KRLSGRTIRLM 459
+++ T +G G FG VY+ KL D G+++A+ KR R +++M
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIM 67
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 32.0 bits (71), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 7/47 (14%)
Query: 420 NFSTTNKLGEGGFGPVYKGKLLD-GQVIAV------KRLSGRTIRLM 459
+++ T +G G FG VY+ KL D G+++A+ KR R +++M
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIM 79
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 7/47 (14%)
Query: 420 NFSTTNKLGEGGFGPVYKGKLLD-GQVIAV------KRLSGRTIRLM 459
+++ T +G G FG VY+ KL D G+++A+ KR R +++M
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIM 72
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 7/47 (14%)
Query: 420 NFSTTNKLGEGGFGPVYKGKLLD-GQVIAV------KRLSGRTIRLM 459
+++ T +G G FG VY+ KL D G+++A+ KR R +++M
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIM 101
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 7/47 (14%)
Query: 420 NFSTTNKLGEGGFGPVYKGKLLD-GQVIAV------KRLSGRTIRLM 459
+++ T +G G FG VY+ KL D G+++A+ KR R +++M
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIM 79
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 7/47 (14%)
Query: 420 NFSTTNKLGEGGFGPVYKGKLLD-GQVIAV------KRLSGRTIRLM 459
+++ T +G G FG VY+ KL D G+++A+ KR R +++M
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIM 101
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 7/47 (14%)
Query: 420 NFSTTNKLGEGGFGPVYKGKLLD-GQVIAV------KRLSGRTIRLM 459
+++ T +G G FG VY+ KL D G+++A+ KR R +++M
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIM 71
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 7/47 (14%)
Query: 420 NFSTTNKLGEGGFGPVYKGKLLD-GQVIAV------KRLSGRTIRLM 459
+++ T +G G FG VY+ KL D G+++A+ KR R +++M
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIM 103
>pdb|1JR1|A Chain A, Crystal Structure Of Inosine Monophosphate Dehydrogenase
In Complex With Mycophenolic Acid
pdb|1JR1|B Chain B, Crystal Structure Of Inosine Monophosphate Dehydrogenase
In Complex With Mycophenolic Acid
Length = 514
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 19/119 (15%)
Query: 99 KESASLTIDSKDGNLKILREGENPIAISSIQEGGNVTRATLLQSGNFVLQEMNSDDTLLP 158
KE+ + SK G L I+ E + +AI + R L ++ ++ L ++ LL
Sbjct: 195 KEANEILQRSKKGKLPIVNENDELVAI--------IARTDLKKNRDYPLASKDAKKQLLC 246
Query: 159 GMKIGINLQTGHKWFLQSWIGGDSPAPGSFTIRLDSNTGNQLIIHHGWLNSIKVEQKDY 217
G IG + ++ L + G D + LDS+ GN + +N IK ++ Y
Sbjct: 247 GAAIGTHEDDKYRLDLLALAGVD-------VVVLDSSQGNSIF----QINMIKYMKEKY 294
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELM 595
+MA E + K+DV+SFGVLL E+++ + Y + ++ YL + L+
Sbjct: 262 WMALESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYLL---QGRRLL 316
Query: 596 EAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634
+ P P E++ L C H +A RP+ +++VS
Sbjct: 317 QPEY-CPDPLYEVM------LKCWHPKAEMRPSFSELVS 348
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 420 NFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRL 451
+++ T +G G FG VY+ KL D G+++A+K++
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV 132
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 7/47 (14%)
Query: 420 NFSTTNKLGEGGFGPVYKGKLLD-GQVIAV------KRLSGRTIRLM 459
+++ T +G G FG VY+ KL D G+++A+ KR R +++M
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIM 105
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 70/179 (39%), Gaps = 48/179 (26%)
Query: 493 LNWSKRITIIEGIAQGLIYLHKYSRLRMNESK---------------------------V 525
L+ S TI+ + +GL YLHK ++ + +
Sbjct: 113 LDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDI 172
Query: 526 NTNRV----VGTYGYMAPEYAMNGI--VSMKADVFSFGVLLLEIVSGRKNNNCYDEERPL 579
N+V VGT +MAPE M + KAD++SFG+ +E+ +G + Y P+
Sbjct: 173 TRNKVRKTFVGTPCWMAPE-VMEQVRGYDFKADIWSFGITAIELATGAAPYHKYP---PM 228
Query: 580 NLVGYLWKEGKASELMEAALDGPCPENELLRCIHAGL-----LCVHDQAVNRPTMADVV 633
++ + S L+ + E+L+ LC+ RPT A+++
Sbjct: 229 KVLMLTLQNDPPS------LETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 281
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 57/218 (26%)
Query: 420 NFSTTNKLGEGGFGPVYKGK--------LLD------GQVIAVKRLSG--RTIR------ 457
+ ++G G FG VYKGK +L+ Q+ A K G R R
Sbjct: 13 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 72
Query: 458 LMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSR 517
MG S + +V ++ SL + S K ++ K I I A+G+ YLH S
Sbjct: 73 FMGYSTK-PQLAIVTQWCEGSSLYHHLHASETKFEMK--KLIDIARQTARGMDYLHAKSI 129
Query: 518 LRMNESKVNT-----NRV-VGTYG----------------------YMAPEYAM---NGI 546
+ + N N V +G +G +MAPE +
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 189
Query: 547 VSMKADVFSFGVLLLEIVSGR-KNNNCYDEERPLNLVG 583
S ++DV++FG++L E+++G+ +N + ++ + +VG
Sbjct: 190 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVG 227
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 78/198 (39%), Gaps = 60/198 (30%)
Query: 426 KLGEGGFGPVYKGK---LLD--GQVIAVKRLSGRT----------------------IRL 458
+LG+G FG V + L D G+V+AVK+L T ++
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 459 MGCSLHGAER--ILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYL--HK 514
G R L+ E++P SL ++ ++++ K + I +G+ YL +
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QAHAERIDHIKLLQYTSQICKGMEYLGTKR 137
Query: 515 YSRLRMNESKV---NTNRV-VGTYG-----------------------YMAPEYAMNGIV 547
Y + + N NRV +G +G + APE
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 197
Query: 548 SMKADVFSFGVLLLEIVS 565
S+ +DV+SFGV+L E+ +
Sbjct: 198 SVASDVWSFGVVLYELFT 215
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + + + ++DV+SFGVL+ EI +
Sbjct: 212 WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 57/218 (26%)
Query: 420 NFSTTNKLGEGGFGPVYKGK--------LLD------GQVIAVKRLSG--RTIR------ 457
+ ++G G FG VYKGK +L+ Q+ A K G R R
Sbjct: 25 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 84
Query: 458 LMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSR 517
MG S + +V ++ SL + S K ++ K I I A+G+ YLH S
Sbjct: 85 FMGYSTK-PQLAIVTQWCEGSSLYHHLHASETKFEMK--KLIDIARQTARGMDYLHAKSI 141
Query: 518 LRMNESKVNT-----NRV-VGTYG----------------------YMAPEYAM---NGI 546
+ + N N V +G +G +MAPE +
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 547 VSMKADVFSFGVLLLEIVSGR-KNNNCYDEERPLNLVG 583
S ++DV++FG++L E+++G+ +N + ++ + +VG
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVG 239
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + + + ++DV+SFGVL+ EI +
Sbjct: 271 WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + + + ++DV+SFGVL+ EI +
Sbjct: 214 WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + + + ++DV+SFGVL+ EI +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + + + ++DV+SFGVL+ EI +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + + + ++DV+SFGVL+ EI +
Sbjct: 217 WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + + + ++DV+SFGVL+ EI +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + + + ++DV+SFGVL+ EI +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + + + ++DV+SFGVL+ EI +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + + + ++DV+SFGVL+ EI +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + + + ++DV+SFGVL+ EI +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + + + ++DV+SFGVL+ EI +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 419 NNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRL 451
NF K+GEG +G VYK + L G+V+A+ ++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKI 36
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 419 NNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRL 451
NF K+GEG +G VYK + L G+V+A+ ++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKI 35
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE + + + ++DV+SFGVL+ EI +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 418 TNNFSTTNKLGEGGFGPVYKG-KLLDGQVIAVKR 450
T F K+G G FG V+K K LDG + A+KR
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR 41
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 418 TNNFSTTNKLGEGGFGPVYKG-KLLDGQVIAVKR 450
T F K+G G FG V+K K LDG + A+KR
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR 43
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 418 TNNFSTTNKLGEGGFGPVYKG-KLLDGQVIAVKR 450
T F K+G G FG V+K K LDG + A+KR
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR 41
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE N + + ++DV+S+G+ L E+ S
Sbjct: 236 WMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 418 TNNFSTTNKLGEGGFGPVYKG-KLLDGQVIAVKR 450
T F K+G G FG V+K K LDG + A+KR
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR 39
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE N + + ++DV+S+G+ L E+ S
Sbjct: 231 WMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE N + + ++DV+S+G+ L E+ S
Sbjct: 236 WMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE N + + ++DV+S+G+ L E+ S
Sbjct: 229 WMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 75/196 (38%), Gaps = 50/196 (25%)
Query: 419 NNFSTTNKLGEGGFGPVYKGKLLDGQV-IAVKRLSGRT---------------------I 456
+ + +KLG G +G VY G + +AVK L T +
Sbjct: 32 TDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 91
Query: 457 RLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK-- 514
+L+G +V E+MP +L ++ + ++++ + + I+ + YL K
Sbjct: 92 QLLGVCTLEPPFYIVTEYMPYGNLLDYLREC-NREEVTAVVLLYMATQISSAMEYLEKKN 150
Query: 515 --YSRLRMNESKVNTNRVV-------------GTYG----------YMAPEYAMNGIVSM 549
+ L V N VV TY + APE S+
Sbjct: 151 FIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSI 210
Query: 550 KADVFSFGVLLLEIVS 565
K+DV++FGVLL EI +
Sbjct: 211 KSDVWAFGVLLWEIAT 226
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 57/139 (41%), Gaps = 31/139 (22%)
Query: 456 IRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYL--- 512
I L G ++V E+M N SLD F+ Q + + ++ GI+ G+ YL
Sbjct: 86 IHLEGVVTKSKPVMIVTEYMENGSLDTFL--KKNDGQFTVIQLVGMLRGISAGMKYLSDM 143
Query: 513 -HKYSRLRMNESKVNTNRV--VGTYG-----------------------YMAPEYAMNGI 546
+ + L +N+N V V +G + APE
Sbjct: 144 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRK 203
Query: 547 VSMKADVFSFGVLLLEIVS 565
+ +DV+S+G+++ E+VS
Sbjct: 204 FTSASDVWSYGIVMWEVVS 222
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+ APE S K+DV+SFG+LL EI S
Sbjct: 171 WTAPEALREAAFSTKSDVWSFGILLWEIYS 200
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+MAPE N + + ++DV+S+G+ L E+ S
Sbjct: 213 WMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 60/144 (41%), Gaps = 33/144 (22%)
Query: 463 LHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYS------ 516
L G E +V EF+ +L D V ++N + T+ + + L YLH
Sbjct: 112 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDI 167
Query: 517 -----------RLRMNE-------SKVNTNR--VVGTYGYMAPEYAMNGIVSMKADVFSF 556
R+++++ SK R +VGT +MAPE + D++S
Sbjct: 168 KSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSL 227
Query: 557 GVLLLEIVSGRKNNNCYDEERPLN 580
G++++E++ G Y E PL
Sbjct: 228 GIMVIEMIDGEPP---YFNEPPLQ 248
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 9/57 (15%)
Query: 527 TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVG 583
T+ GT Y+APE D ++ GVL+ E+++GR P ++VG
Sbjct: 178 TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRS---------PFDIVG 225
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 9/57 (15%)
Query: 527 TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVG 583
T+ GT Y+APE D ++ GVL+ E+++GR P ++VG
Sbjct: 163 TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRS---------PFDIVG 210
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 9/57 (15%)
Query: 527 TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVG 583
T+ GT Y+APE D ++ GVL+ E+++GR P ++VG
Sbjct: 167 TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRS---------PFDIVG 214
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 82/205 (40%), Gaps = 61/205 (29%)
Query: 420 NFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRL------SGRTIRLM------------G 460
+F +G GGFG V+K K +DG+ +KR+ + R ++ + G
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNG 71
Query: 461 C----------SLHGAER------ILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEG 504
C S + R + EF +L+ +I + + ++L+ + + E
Sbjct: 72 CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EKRRGEKLDKVLALELFEQ 130
Query: 505 IAQGLIYLH---------KYSRLRMNESKV----------------NTNRVVGTYGYMAP 539
I +G+ Y+H K S + + ++K R GT YM+P
Sbjct: 131 ITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSP 190
Query: 540 EYAMNGIVSMKADVFSFGVLLLEIV 564
E + + D+++ G++L E++
Sbjct: 191 EQISSQDYGKEVDLYALGLILAELL 215
>pdb|2E4U|A Chain A, Crystal Structure Of The Extracellular Region Of The Group
Ii Metabotropic Glutamate Receptor Complexed With
L-glutamate
pdb|2E4U|B Chain B, Crystal Structure Of The Extracellular Region Of The Group
Ii Metabotropic Glutamate Receptor Complexed With
L-glutamate
pdb|2E4V|A Chain A, Crystal Structure Of The Extracellular Region Of The Group
Ii Metabotropic Glutamate Receptor Complexed With Dcg-Iv
pdb|2E4V|B Chain B, Crystal Structure Of The Extracellular Region Of The Group
Ii Metabotropic Glutamate Receptor Complexed With Dcg-Iv
pdb|2E4W|A Chain A, Crystal Structure Of The Extracellular Region Of The Group
Ii Metabotropic Glutamate Receptor Complexed With
1s,3s-Acpd
pdb|2E4W|B Chain B, Crystal Structure Of The Extracellular Region Of The Group
Ii Metabotropic Glutamate Receptor Complexed With
1s,3s-Acpd
pdb|2E4X|A Chain A, Crystal Structure Of The Extracellular Region Of The Group
Ii Metabotropic Glutamate Receptor Complexed With
1s,3r-Acpd
pdb|2E4X|B Chain B, Crystal Structure Of The Extracellular Region Of The Group
Ii Metabotropic Glutamate Receptor Complexed With
1s,3r-Acpd
pdb|2E4Y|A Chain A, Crystal Structure Of The Extracellular Region Of The Group
Ii Metabotropic Glutamate Receptor Complexed With
2r,4r-Apdc
pdb|2E4Y|B Chain B, Crystal Structure Of The Extracellular Region Of The Group
Ii Metabotropic Glutamate Receptor Complexed With
2r,4r-Apdc
Length = 555
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 21/27 (77%)
Query: 140 LQSGNFVLQEMNSDDTLLPGMKIGINL 166
L++ F + E+N D+ LLPG+K+G+++
Sbjct: 45 LEAMLFAIDEINKDNYLLPGVKLGVHI 71
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 9/57 (15%)
Query: 527 TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVG 583
T+ GT Y+APE D ++ GVL+ E+++GR P ++VG
Sbjct: 210 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRS---------PFDIVG 257
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 12/104 (11%)
Query: 526 NTNRVVGTYGYMAPEYAMNGI-----VSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLN 580
+T+ VGT YMAPE I ++ D+++ G++L E+VS K + +E L
Sbjct: 181 DTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLP 240
Query: 581 LVGYLWKEGKASELMEAALDG---PCPENELLRCIHAGL--LCV 619
+ + EL E + P ++ L+ H GL LCV
Sbjct: 241 FEEEIGQHPSLEELQEVVVHKKMRPTIKDHWLK--HPGLAQLCV 282
>pdb|1B3O|A Chain A, Ternary Complex Of Human Type-Ii Inosine Monophosphate
Dehydrogenase With 6-Cl-Imp And Selenazole Adenine
Dinucleotide
pdb|1B3O|B Chain B, Ternary Complex Of Human Type-Ii Inosine Monophosphate
Dehydrogenase With 6-Cl-Imp And Selenazole Adenine
Dinucleotide
pdb|1NF7|A Chain A, Ternary Complex Of The Human Type Ii Inosine Monophosphate
Dedhydrogenase With Ribavirin Monophosphate And C2-
Mycophenolic Adenine Dinucleotide
pdb|1NF7|B Chain B, Ternary Complex Of The Human Type Ii Inosine Monophosphate
Dedhydrogenase With Ribavirin Monophosphate And C2-
Mycophenolic Adenine Dinucleotide
pdb|1NFB|A Chain A, Ternary Complex Of The Human Type Ii Inosine Monophosphate
Dedhydrogenase With 6cl-Imp And Nad
pdb|1NFB|B Chain B, Ternary Complex Of The Human Type Ii Inosine Monophosphate
Dedhydrogenase With 6cl-Imp And Nad
Length = 514
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 19/119 (15%)
Query: 99 KESASLTIDSKDGNLKILREGENPIAISSIQEGGNVTRATLLQSGNFVLQEMNSDDTLLP 158
KE+ + SK G L I+ E + +AI + R L ++ ++ L ++ LL
Sbjct: 195 KEANEILQRSKKGKLPIVNEDDELVAI--------IARTDLKKNRDYPLASKDAKKQLLC 246
Query: 159 GMKIGINLQTGHKWFLQSWIGGDSPAPGSFTIRLDSNTGNQLIIHHGWLNSIKVEQKDY 217
G IG + ++ L + G D + LDS+ GN + +N IK + Y
Sbjct: 247 GAAIGTHEDDKYRLDLLAQAGVD-------VVVLDSSQGNSIF----QINMIKYIKDKY 294
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+ APE S K+DV+SFG+LL EI S
Sbjct: 352 WTAPEALREKKFSTKSDVWSFGILLWEIYS 381
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 527 TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSG 566
T + GT Y+APE + D +SFG+L+ E+++G
Sbjct: 160 TYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 415 AAATNNFSTTNKLGEGGFGPVYKG-KLLDGQVIAVKRL 451
A + + + KLGEG +G VYK + + +A+KR+
Sbjct: 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRI 67
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 522 ESK-VNTNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSG 566
ESK N VGT Y++PE S +D+++ G ++ ++V+G
Sbjct: 185 ESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Query: 521 NESKVNTNRVVGTYGYMAPEYAMNGI------VSMKADVFSFGVLLLEI 563
NE + N VGT YM PE + + AD++SFG++L E+
Sbjct: 197 NEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+ APE S K+DV+SFG+LL EI S
Sbjct: 165 WTAPEALREKKFSTKSDVWSFGILLWEIYS 194
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 8/72 (11%)
Query: 527 TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSG--------RKNNNCYDEERP 578
T+ GT YMAPE M + D +S G L+ ++++G RK +
Sbjct: 178 THXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCK 237
Query: 579 LNLVGYLWKEGK 590
LNL YL +E +
Sbjct: 238 LNLPPYLTQEAR 249
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 8/72 (11%)
Query: 527 TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSG--------RKNNNCYDEERP 578
T+ GT YMAPE M + D +S G L+ ++++G RK +
Sbjct: 178 THTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCK 237
Query: 579 LNLVGYLWKEGK 590
LNL YL +E +
Sbjct: 238 LNLPPYLTQEAR 249
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+ APE + I S ++DV+SFGV+L E+ +
Sbjct: 183 WYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+ APE S K+DV+SFG+LL EI S
Sbjct: 180 WTAPEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+ APE + I S ++DV+SFGV+L E+ +
Sbjct: 184 WYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 4/102 (3%)
Query: 466 AERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKV 525
A R+L+Y K +++ S + + + R ++E A I ++L +
Sbjct: 110 ASRLLLYSSQICKGMEYL--GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDX 167
Query: 526 NTNRVVGTYG--YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
R G + APE + I S ++DV+SFGV+L E+ +
Sbjct: 168 XVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 530 VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSG 566
++ T Y APE +N + +D++SFG +L E+ +G
Sbjct: 219 IINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTG 255
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+ APE + I S ++DV+SFGV+L E+ +
Sbjct: 196 WYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 508 GLIYLHKYSRLRMNESKVNTNRV-VGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
G + L + R+ S V R +GT Y++PE N + K+D+++ G +L E+ +
Sbjct: 162 GTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCT 220
>pdb|2RI1|A Chain A, Crystal Structure Of Glucosamine 6-Phosphate Deaminase
(Nagb) With Glcn6p From S. Mutans
pdb|2RI1|B Chain B, Crystal Structure Of Glucosamine 6-Phosphate Deaminase
(Nagb) With Glcn6p From S. Mutans
Length = 235
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 223 LSNGHFNFSDLESINQDYNFSFISDEKEQYFSYSVNEDVISLFPMLKIDPEGGLTENCS 281
+ H +FSD+ SIN D +D+K+ Y +Y + +++ + P K GL + +
Sbjct: 48 IRESHLDFSDMVSINLDEYVGLSADDKQSY-AYFMKQNLFAAKPFKKSYLPNGLAADLA 105
>pdb|2RI0|A Chain A, Crystal Structure Of Glucosamine 6-Phosphate Deaminase
(Nagb) From S. Mutans
pdb|2RI0|B Chain B, Crystal Structure Of Glucosamine 6-Phosphate Deaminase
(Nagb) From S. Mutans
Length = 234
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 223 LSNGHFNFSDLESINQDYNFSFISDEKEQYFSYSVNEDVISLFPMLKIDPEGGLTENCS 281
+ H +FSD+ SIN D +D+K+ Y +Y + +++ + P K GL + +
Sbjct: 47 IRESHLDFSDMVSINLDEYVGLSADDKQSY-AYFMKQNLFAAKPFKKSYLPNGLAADLA 104
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 520 MNESKVNTNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565
+N + VGT YM+PE + K+D++S G LL E+ +
Sbjct: 166 LNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 518 LRMNESKVNTNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSG 566
+++ ES + VGT +MAPE DV+ GV+L ++SG
Sbjct: 181 IQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 28.9 bits (63), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 518 LRMNESKVNTNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSG 566
+++ ES + VGT +MAPE DV+ GV+L ++SG
Sbjct: 183 IQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 28.9 bits (63), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 419 NNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRL 451
+ K+GEG +G V+K + D GQ++A+K+
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKF 36
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,122,313
Number of Sequences: 62578
Number of extensions: 866050
Number of successful extensions: 3241
Number of sequences better than 100.0: 404
Number of HSP's better than 100.0 without gapping: 235
Number of HSP's successfully gapped in prelim test: 169
Number of HSP's that attempted gapping in prelim test: 2764
Number of HSP's gapped (non-prelim): 554
length of query: 664
length of database: 14,973,337
effective HSP length: 105
effective length of query: 559
effective length of database: 8,402,647
effective search space: 4697079673
effective search space used: 4697079673
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)