Query 040814
Match_columns 664
No_of_seqs 536 out of 3940
Neff 8.6
Searched_HMMs 46136
Date Fri Mar 29 12:05:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040814.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040814hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 100.0 5.2E-42 1.1E-46 363.4 20.6 235 405-640 61-353 (361)
2 KOG0192 Tyrosine kinase specif 100.0 3.2E-35 6.8E-40 309.6 18.1 209 423-644 45-308 (362)
3 KOG0581 Mitogen-activated prot 100.0 5.4E-33 1.2E-37 279.4 15.5 200 422-635 82-335 (364)
4 KOG0197 Tyrosine kinases [Sign 100.0 1.3E-32 2.8E-37 289.0 13.2 205 422-640 209-462 (468)
5 KOG0575 Polo-like serine/threo 100.0 6.5E-32 1.4E-36 286.4 17.5 198 419-635 18-269 (592)
6 KOG0595 Serine/threonine-prote 100.0 3.5E-32 7.5E-37 275.7 14.4 156 418-576 9-220 (429)
7 PLN00113 leucine-rich repeat r 100.0 2.3E-31 5E-36 321.2 24.0 217 419-641 690-953 (968)
8 KOG1026 Nerve growth factor re 100.0 3.7E-32 8E-37 298.7 14.5 210 419-641 486-764 (774)
9 KOG4721 Serine/threonine prote 100.0 2.8E-32 6.1E-37 283.9 12.5 214 404-640 116-369 (904)
10 KOG0615 Serine/threonine prote 100.0 1.2E-31 2.6E-36 271.3 11.8 199 418-634 171-436 (475)
11 KOG0196 Tyrosine kinase, EPH ( 100.0 1.4E-31 3E-36 288.4 9.1 215 420-649 630-901 (996)
12 KOG0598 Ribosomal protein S6 k 100.0 1.2E-30 2.6E-35 262.5 13.1 191 418-627 24-269 (357)
13 cd05102 PTKc_VEGFR3 Catalytic 100.0 2.5E-30 5.5E-35 275.0 16.1 212 417-640 5-335 (338)
14 KOG0591 NIMA (never in mitosis 100.0 2.3E-31 4.9E-36 256.8 6.8 204 419-638 19-284 (375)
15 KOG0605 NDR and related serine 100.0 8.3E-30 1.8E-34 266.4 16.3 206 415-634 137-444 (550)
16 PHA02988 hypothetical protein; 100.0 1.7E-29 3.6E-34 261.9 18.6 215 405-640 11-280 (283)
17 KOG0592 3-phosphoinositide-dep 100.0 6.2E-30 1.3E-34 267.0 14.2 226 415-657 69-360 (604)
18 KOG0193 Serine/threonine prote 100.0 4.2E-30 9E-35 271.3 12.2 216 412-641 385-655 (678)
19 cd05064 PTKc_EphR_A10 Catalyti 100.0 2.4E-29 5.3E-34 258.1 16.8 206 419-639 5-265 (266)
20 KOG0201 Serine/threonine prote 100.0 9.9E-31 2.1E-35 267.1 6.1 200 420-635 14-263 (467)
21 KOG1095 Protein tyrosine kinas 100.0 1.7E-29 3.7E-34 287.4 15.7 208 420-640 693-962 (1025)
22 KOG0582 Ste20-like serine/thre 100.0 3.2E-29 7E-34 256.0 15.8 213 418-635 25-293 (516)
23 KOG0578 p21-activated serine/t 100.0 8.6E-30 1.9E-34 268.2 11.4 202 419-635 273-523 (550)
24 cd05104 PTKc_Kit Catalytic dom 100.0 4.5E-29 9.7E-34 269.2 16.9 210 418-639 34-374 (375)
25 KOG0694 Serine/threonine prote 100.0 2.8E-29 6E-34 269.3 14.2 196 414-629 363-613 (694)
26 cd05106 PTKc_CSF-1R Catalytic 100.0 4.8E-29 1E-33 268.7 16.1 211 418-640 37-373 (374)
27 cd05631 STKc_GRK4 Catalytic do 100.0 1.2E-28 2.7E-33 255.6 17.3 204 420-634 1-260 (285)
28 cd05096 PTKc_DDR1 Catalytic do 100.0 1.1E-28 2.5E-33 258.2 17.1 214 419-638 5-304 (304)
29 PF07714 Pkinase_Tyr: Protein 100.0 5E-29 1.1E-33 254.8 13.1 200 423-636 3-259 (259)
30 cd05072 PTKc_Lyn Catalytic dom 100.0 1.9E-28 4.1E-33 250.3 17.1 207 418-638 5-260 (261)
31 KOG0661 MAPK related serine/th 100.0 1.3E-29 2.7E-34 260.9 8.0 216 417-635 8-291 (538)
32 KOG3653 Transforming growth fa 100.0 2.4E-28 5.3E-33 251.2 17.4 214 422-640 213-504 (534)
33 cd05114 PTKc_Tec_Rlk Catalytic 100.0 2.3E-28 4.9E-33 249.1 17.2 204 419-637 4-256 (256)
34 cd05048 PTKc_Ror Catalytic Dom 100.0 2.3E-28 4.9E-33 252.9 17.2 207 419-638 5-282 (283)
35 cd05052 PTKc_Abl Catalytic dom 100.0 2.8E-28 6E-33 249.7 16.5 207 419-639 6-262 (263)
36 cd05105 PTKc_PDGFR_alpha Catal 100.0 3.5E-28 7.7E-33 263.5 18.2 212 417-640 35-398 (400)
37 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.2E-28 2.6E-33 261.7 14.1 208 419-635 1-257 (333)
38 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.8E-28 4E-33 250.3 14.9 209 417-639 4-261 (261)
39 KOG0194 Protein tyrosine kinas 100.0 4.9E-29 1.1E-33 266.2 10.1 210 418-641 156-422 (474)
40 cd05587 STKc_cPKC Catalytic do 100.0 2.2E-28 4.9E-33 258.5 14.8 193 420-629 1-246 (324)
41 KOG0616 cAMP-dependent protein 100.0 2.7E-28 5.8E-33 237.5 13.8 190 418-626 43-283 (355)
42 cd06649 PKc_MEK2 Catalytic dom 100.0 6.1E-28 1.3E-32 256.0 17.7 215 418-635 4-301 (331)
43 KOG0597 Serine-threonine prote 100.0 1.3E-28 2.8E-33 257.0 11.5 196 419-634 2-250 (808)
44 cd05068 PTKc_Frk_like Catalyti 100.0 7.2E-28 1.6E-32 246.2 16.8 207 418-638 5-260 (261)
45 KOG0198 MEKK and related serin 100.0 1.5E-28 3.1E-33 251.6 11.4 205 419-636 17-277 (313)
46 cd05612 STKc_PRKX_like Catalyt 100.0 3.2E-28 6.9E-33 253.3 14.2 200 419-635 1-254 (291)
47 cd05094 PTKc_TrkC Catalytic do 100.0 7.1E-28 1.5E-32 250.6 16.7 210 419-641 5-284 (291)
48 cd07848 STKc_CDKL5 Catalytic d 100.0 6.6E-28 1.4E-32 250.0 16.5 213 419-634 1-283 (287)
49 cd05062 PTKc_IGF-1R Catalytic 100.0 7.9E-28 1.7E-32 248.2 16.9 209 417-638 4-277 (277)
50 cd05616 STKc_cPKC_beta Catalyt 100.0 4.4E-28 9.6E-33 256.2 15.1 193 420-629 1-246 (323)
51 cd05054 PTKc_VEGFR Catalytic d 100.0 6.8E-28 1.5E-32 256.2 16.1 211 418-640 6-334 (337)
52 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1E-27 2.2E-32 244.7 16.4 204 419-637 4-256 (256)
53 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.8E-27 3.9E-32 243.1 18.2 206 418-638 5-259 (260)
54 cd05033 PTKc_EphR Catalytic do 100.0 1.5E-27 3.2E-32 244.6 17.6 207 418-639 3-265 (266)
55 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.5E-27 3.2E-32 246.3 17.1 209 417-638 4-277 (277)
56 PTZ00263 protein kinase A cata 100.0 7.4E-28 1.6E-32 255.1 14.9 199 419-634 18-270 (329)
57 PTZ00426 cAMP-dependent protei 100.0 8.8E-28 1.9E-32 255.5 15.3 201 418-635 29-284 (340)
58 cd05093 PTKc_TrkB Catalytic do 100.0 1.4E-27 3E-32 248.0 16.3 210 419-641 5-281 (288)
59 cd05049 PTKc_Trk Catalytic dom 99.9 1.2E-27 2.6E-32 247.0 15.7 207 419-638 5-280 (280)
60 cd05585 STKc_YPK1_like Catalyt 99.9 8.4E-28 1.8E-32 252.8 14.6 190 427-635 1-244 (312)
61 cd05063 PTKc_EphR_A2 Catalytic 99.9 2.6E-27 5.6E-32 242.9 17.8 207 418-639 4-267 (268)
62 cd05090 PTKc_Ror1 Catalytic do 99.9 2.5E-27 5.4E-32 245.3 17.7 207 419-638 5-282 (283)
63 cd05059 PTKc_Tec_like Catalyti 99.9 1.9E-27 4.2E-32 242.4 16.7 202 420-636 5-255 (256)
64 cd05053 PTKc_FGFR Catalytic do 99.9 1.4E-27 3.1E-32 248.3 15.9 212 416-640 9-292 (293)
65 cd08228 STKc_Nek6 Catalytic do 99.9 3.9E-27 8.5E-32 241.4 18.9 211 419-640 2-266 (267)
66 cd05111 PTK_HER3 Pseudokinase 99.9 2.4E-27 5.2E-32 245.1 17.2 206 419-640 7-269 (279)
67 cd07862 STKc_CDK6 Catalytic do 99.9 2.6E-27 5.5E-32 246.0 17.4 214 419-634 1-286 (290)
68 cd05571 STKc_PKB Catalytic dom 99.9 7.8E-28 1.7E-32 254.3 13.7 193 425-634 1-250 (323)
69 cd05067 PTKc_Lck_Blk Catalytic 99.9 2.8E-27 6.1E-32 241.7 17.3 206 418-638 5-259 (260)
70 cd05589 STKc_PKN Catalytic dom 99.9 1.9E-27 4.1E-32 251.4 16.6 196 421-634 1-256 (324)
71 cd05619 STKc_nPKC_theta Cataly 99.9 1.1E-27 2.5E-32 252.2 14.6 192 425-633 1-246 (316)
72 KOG0580 Serine/threonine prote 99.9 9.3E-28 2E-32 227.4 12.4 202 418-634 21-272 (281)
73 cd05116 PTKc_Syk Catalytic dom 99.9 2.5E-27 5.3E-32 241.7 16.6 196 426-638 2-254 (257)
74 cd05107 PTKc_PDGFR_beta Cataly 99.9 1.9E-27 4E-32 257.8 16.4 212 417-640 35-400 (401)
75 cd08224 STKc_Nek6_Nek7 Catalyt 99.9 6.4E-27 1.4E-31 239.5 19.5 211 419-640 2-266 (267)
76 PTZ00284 protein kinase; Provi 99.9 2.3E-27 5.1E-32 263.3 17.0 218 413-634 123-437 (467)
77 cd05608 STKc_GRK1 Catalytic do 99.9 4.1E-27 8.9E-32 243.5 17.6 197 427-635 1-257 (280)
78 cd05089 PTKc_Tie1 Catalytic do 99.9 2.5E-27 5.5E-32 247.2 16.2 210 419-641 2-277 (297)
79 cd05108 PTKc_EGFR Catalytic do 99.9 2E-27 4.4E-32 250.3 15.5 207 419-641 7-270 (316)
80 cd05592 STKc_nPKC_theta_delta 99.9 2.2E-27 4.8E-32 250.1 15.7 192 425-633 1-246 (316)
81 cd05091 PTKc_Ror2 Catalytic do 99.9 2.7E-27 5.9E-32 244.9 15.9 206 420-638 6-282 (283)
82 cd05620 STKc_nPKC_delta Cataly 99.9 1.4E-27 3.1E-32 251.5 14.0 192 425-633 1-246 (316)
83 cd05032 PTKc_InsR_like Catalyt 99.9 3.6E-27 7.8E-32 243.0 16.7 208 418-638 5-277 (277)
84 KOG4279 Serine/threonine prote 99.9 4.5E-28 9.6E-33 257.4 10.0 198 425-635 581-832 (1226)
85 cd05071 PTKc_Src Catalytic dom 99.9 5.9E-27 1.3E-31 239.8 18.0 207 418-639 5-260 (262)
86 cd05084 PTKc_Fes Catalytic dom 99.9 4.1E-27 8.9E-32 239.2 16.7 198 425-637 1-251 (252)
87 KOG0583 Serine/threonine prote 99.9 5.5E-27 1.2E-31 249.3 18.3 198 417-633 15-273 (370)
88 cd05614 STKc_MSK2_N N-terminal 99.9 2.4E-27 5.2E-32 251.5 15.5 202 420-634 1-266 (332)
89 cd05590 STKc_nPKC_eta Catalyti 99.9 1.9E-27 4.2E-32 250.9 14.6 186 425-629 1-241 (320)
90 KOG0593 Predicted protein kina 99.9 3.1E-28 6.8E-33 237.4 7.8 212 419-634 2-283 (396)
91 cd05051 PTKc_DDR Catalytic dom 99.9 4.3E-27 9.3E-32 245.0 16.9 215 418-638 4-296 (296)
92 cd05043 PTK_Ryk Pseudokinase d 99.9 3E-27 6.6E-32 244.2 15.6 212 417-641 4-278 (280)
93 PTZ00283 serine/threonine prot 99.9 3E-27 6.4E-32 263.3 16.6 206 414-635 27-297 (496)
94 cd05045 PTKc_RET Catalytic dom 99.9 5.2E-27 1.1E-31 243.9 17.4 208 420-640 1-287 (290)
95 cd05595 STKc_PKB_beta Catalyti 99.9 2.9E-27 6.2E-32 250.0 15.6 193 425-634 1-250 (323)
96 cd06650 PKc_MEK1 Catalytic dom 99.9 6.1E-27 1.3E-31 248.5 18.2 214 418-634 4-298 (333)
97 cd05605 STKc_GRK4_like Catalyt 99.9 4.5E-27 9.8E-32 243.9 16.8 205 420-635 1-261 (285)
98 cd05098 PTKc_FGFR1 Catalytic d 99.9 4.2E-27 9.2E-32 246.7 16.8 211 418-641 17-301 (307)
99 cd06637 STKc_TNIK Catalytic do 99.9 3.3E-27 7.1E-32 242.6 15.5 206 416-634 3-268 (272)
100 cd05588 STKc_aPKC Catalytic do 99.9 3.2E-27 6.9E-32 250.3 15.7 200 425-634 1-261 (329)
101 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.9 4.7E-27 1E-31 243.2 16.6 214 422-640 7-282 (283)
102 cd05591 STKc_nPKC_epsilon Cata 99.9 2.4E-27 5.1E-32 250.4 14.6 192 425-635 1-254 (321)
103 cd08529 STKc_FA2-like Catalyti 99.9 7.5E-27 1.6E-31 237.5 17.8 202 420-635 1-253 (256)
104 cd05055 PTKc_PDGFR Catalytic d 99.9 5.8E-27 1.3E-31 245.2 17.3 209 418-639 34-301 (302)
105 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.9 7.3E-27 1.6E-31 240.9 17.7 195 426-637 2-274 (274)
106 cd05615 STKc_cPKC_alpha Cataly 99.9 3.7E-27 7.9E-32 249.1 15.8 193 420-629 1-246 (323)
107 cd05618 STKc_aPKC_iota Catalyt 99.9 3.2E-27 7E-32 250.2 15.3 195 425-629 1-250 (329)
108 cd05061 PTKc_InsR Catalytic do 99.9 4.9E-27 1.1E-31 243.9 16.3 211 417-640 4-279 (288)
109 cd05617 STKc_aPKC_zeta Catalyt 99.9 4.8E-27 1E-31 248.7 16.6 195 425-629 1-248 (327)
110 cd08229 STKc_Nek7 Catalytic do 99.9 6.4E-27 1.4E-31 239.8 16.9 210 419-639 2-265 (267)
111 PTZ00036 glycogen synthase kin 99.9 4.1E-27 9E-32 258.8 16.2 218 417-635 64-351 (440)
112 cd05082 PTKc_Csk Catalytic dom 99.9 8.3E-27 1.8E-31 237.6 17.3 206 419-639 6-256 (256)
113 KOG0588 Serine/threonine prote 99.9 4E-27 8.6E-32 250.8 15.3 197 420-635 13-263 (786)
114 cd07871 STKc_PCTAIRE3 Catalyti 99.9 9.1E-27 2E-31 241.9 17.9 213 419-634 5-284 (288)
115 cd05101 PTKc_FGFR2 Catalytic d 99.9 5.2E-27 1.1E-31 245.6 16.1 210 418-640 14-297 (304)
116 cd05069 PTKc_Yes Catalytic dom 99.9 1.2E-26 2.5E-31 237.2 18.2 205 419-638 6-259 (260)
117 KOG0589 Serine/threonine prote 99.9 2.1E-27 4.6E-32 249.0 13.0 200 419-635 4-258 (426)
118 cd05596 STKc_ROCK Catalytic do 99.9 1.5E-27 3.3E-32 256.8 12.3 204 416-635 40-304 (370)
119 cd05570 STKc_PKC Catalytic dom 99.9 4E-27 8.7E-32 248.3 15.2 193 425-634 1-251 (318)
120 cd05097 PTKc_DDR_like Catalyti 99.9 4.7E-27 1E-31 244.9 15.4 214 419-638 5-295 (295)
121 cd05593 STKc_PKB_gamma Catalyt 99.9 3.6E-27 7.7E-32 249.8 14.7 194 425-635 1-251 (328)
122 cd05621 STKc_ROCK2 Catalytic d 99.9 3.8E-27 8.3E-32 253.5 15.0 206 414-635 38-304 (370)
123 cd07859 STKc_TDY_MAPK_plant Ca 99.9 6.4E-27 1.4E-31 248.5 16.6 212 420-635 1-290 (338)
124 cd05085 PTKc_Fer Catalytic dom 99.9 1.1E-26 2.4E-31 235.5 17.6 198 425-637 1-249 (250)
125 cd05050 PTKc_Musk Catalytic do 99.9 8E-27 1.7E-31 242.1 16.8 208 418-638 4-288 (288)
126 cd05035 PTKc_Axl_like Catalyti 99.9 1.1E-26 2.3E-31 238.7 17.6 206 421-639 1-272 (273)
127 cd05034 PTKc_Src_like Catalyti 99.9 1.3E-26 2.7E-31 236.8 17.9 208 417-638 4-260 (261)
128 cd05573 STKc_ROCK_NDR_like Cat 99.9 1.4E-27 3E-32 255.0 11.3 201 419-635 1-285 (350)
129 PTZ00267 NIMA-related protein 99.9 9.8E-27 2.1E-31 258.7 18.4 199 420-634 68-322 (478)
130 cd05626 STKc_LATS2 Catalytic d 99.9 5.1E-27 1.1E-31 253.9 15.6 203 420-635 2-305 (381)
131 cd05088 PTKc_Tie2 Catalytic do 99.9 7.5E-27 1.6E-31 244.4 16.4 211 418-641 6-282 (303)
132 KOG2052 Activin A type IB rece 99.9 3.9E-27 8.4E-32 240.7 13.5 229 403-640 198-504 (513)
133 cd05109 PTKc_HER2 Catalytic do 99.9 1.1E-26 2.3E-31 240.1 17.0 208 418-641 6-270 (279)
134 cd05103 PTKc_VEGFR2 Catalytic 99.9 5.6E-27 1.2E-31 249.9 15.2 211 418-640 6-340 (343)
135 cd06654 STKc_PAK1 Catalytic do 99.9 1.5E-26 3.2E-31 241.4 18.1 202 419-635 20-270 (296)
136 cd05628 STKc_NDR1 Catalytic do 99.9 6.1E-27 1.3E-31 251.6 15.6 152 419-573 1-239 (363)
137 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.9 4.8E-27 1E-31 239.8 13.8 196 425-637 1-258 (258)
138 PLN00034 mitogen-activated pro 99.9 7E-27 1.5E-31 250.2 15.6 199 420-635 75-328 (353)
139 cd05599 STKc_NDR_like Catalyti 99.9 3.7E-27 8E-32 253.3 13.5 202 419-634 1-295 (364)
140 cd05112 PTKc_Itk Catalytic dom 99.9 1.6E-26 3.4E-31 235.4 17.4 204 419-637 4-256 (256)
141 cd05073 PTKc_Hck Catalytic dom 99.9 1.9E-26 4E-31 235.7 17.5 206 418-638 5-259 (260)
142 cd05092 PTKc_TrkA Catalytic do 99.9 1.2E-26 2.6E-31 240.0 16.2 207 419-638 5-280 (280)
143 cd05077 PTK_Jak1_rpt1 Pseudoki 99.9 1.9E-26 4E-31 236.2 17.5 195 425-636 1-261 (262)
144 cd05095 PTKc_DDR2 Catalytic do 99.9 1.4E-26 3E-31 241.5 16.9 214 419-638 5-296 (296)
145 cd05607 STKc_GRK7 Catalytic do 99.9 1.4E-26 3E-31 239.2 16.7 197 427-636 1-251 (277)
146 cd05039 PTKc_Csk_like Catalyti 99.9 1.9E-26 4.2E-31 234.8 17.5 207 418-639 5-256 (256)
147 cd05575 STKc_SGK Catalytic dom 99.9 3.2E-27 7E-32 249.6 12.1 187 425-630 1-242 (323)
148 cd05099 PTKc_FGFR4 Catalytic d 99.9 1.7E-26 3.7E-31 242.9 17.4 211 418-641 11-295 (314)
149 cd05115 PTKc_Zap-70 Catalytic 99.9 2.1E-26 4.5E-31 235.1 17.4 198 426-639 2-255 (257)
150 cd06646 STKc_MAP4K5 Catalytic 99.9 1.3E-26 2.7E-31 237.7 15.7 206 419-636 9-266 (267)
151 cd06624 STKc_ASK Catalytic dom 99.9 2.2E-26 4.8E-31 236.1 17.6 208 414-634 3-264 (268)
152 cd08528 STKc_Nek10 Catalytic d 99.9 2E-26 4.3E-31 236.5 17.1 207 420-638 1-269 (269)
153 cd05066 PTKc_EphR_A Catalytic 99.9 1.9E-26 4E-31 236.7 16.9 206 419-639 4-266 (267)
154 cd05584 STKc_p70S6K Catalytic 99.9 1.1E-26 2.3E-31 245.6 15.3 193 425-634 2-255 (323)
155 cd05594 STKc_PKB_alpha Catalyt 99.9 2.7E-27 5.9E-32 250.4 10.7 194 425-635 1-252 (325)
156 cd06636 STKc_MAP4K4_6 Catalyti 99.9 1.6E-26 3.6E-31 238.9 16.4 212 410-634 7-278 (282)
157 cd05065 PTKc_EphR_B Catalytic 99.9 1.5E-26 3.3E-31 237.5 15.9 206 419-639 4-268 (269)
158 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.9 3.1E-26 6.8E-31 237.1 18.4 218 419-639 4-283 (284)
159 cd06620 PKc_MAPKK_Byr1_like Ca 99.9 1.7E-26 3.6E-31 239.3 16.3 210 419-636 5-267 (284)
160 cd08219 STKc_Nek3 Catalytic do 99.9 1.8E-26 4E-31 234.8 16.3 202 420-635 1-252 (255)
161 cd05629 STKc_NDR_like_fungal C 99.9 6.7E-27 1.5E-31 252.6 13.7 203 419-635 1-305 (377)
162 cd06625 STKc_MEKK3_like Cataly 99.9 2.2E-26 4.8E-31 235.1 16.8 202 419-635 2-260 (263)
163 cd06638 STKc_myosinIIIA Cataly 99.9 1.4E-26 3E-31 239.9 15.4 215 410-635 9-283 (286)
164 cd07869 STKc_PFTAIRE1 Catalyti 99.9 2.6E-26 5.6E-31 240.3 17.6 214 418-634 4-287 (303)
165 cd05060 PTKc_Syk_like Catalyti 99.9 2.8E-26 6.1E-31 233.8 17.3 199 425-640 1-256 (257)
166 cd06640 STKc_MST4 Catalytic do 99.9 4.5E-26 9.8E-31 235.2 19.0 199 420-635 5-253 (277)
167 cd05047 PTKc_Tie Catalytic dom 99.9 2.9E-26 6.2E-31 235.7 17.4 203 425-640 1-269 (270)
168 cd06615 PKc_MEK Catalytic doma 99.9 2.8E-26 6.2E-31 240.7 17.6 214 419-635 1-287 (308)
169 cd08227 PK_STRAD_alpha Pseudok 99.9 1.9E-26 4.2E-31 244.0 16.5 207 423-634 2-306 (327)
170 cd05601 STKc_CRIK Catalytic do 99.9 2.8E-27 6.1E-32 250.7 10.0 203 419-634 1-262 (330)
171 cd05630 STKc_GRK6 Catalytic do 99.9 2.2E-26 4.8E-31 238.7 16.4 203 421-634 2-260 (285)
172 PHA03212 serine/threonine kina 99.9 2.5E-26 5.3E-31 248.8 17.4 213 418-634 91-375 (391)
173 cd06609 STKc_MST3_like Catalyt 99.9 3.1E-26 6.7E-31 235.9 17.3 200 419-635 1-251 (274)
174 KOG4257 Focal adhesion tyrosin 99.9 5.5E-27 1.2E-31 246.9 11.7 205 421-641 391-651 (974)
175 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.9 3.1E-26 6.7E-31 235.3 17.1 204 425-637 1-268 (269)
176 cd05598 STKc_LATS Catalytic do 99.9 4.8E-27 1.1E-31 253.6 11.6 203 419-635 1-301 (376)
177 cd06642 STKc_STK25-YSK1 Cataly 99.9 1.5E-26 3.3E-31 238.7 14.7 199 420-635 5-253 (277)
178 cd05110 PTKc_HER4 Catalytic do 99.9 2.1E-26 4.6E-31 241.0 16.0 226 419-660 7-297 (303)
179 cd05602 STKc_SGK1 Catalytic do 99.9 7.9E-27 1.7E-31 246.8 12.9 194 425-635 1-247 (325)
180 cd05622 STKc_ROCK1 Catalytic d 99.9 1.1E-26 2.4E-31 250.0 14.0 211 411-635 35-304 (371)
181 KOG1094 Discoidin domain recep 99.9 4E-27 8.7E-32 246.7 10.1 215 418-639 537-804 (807)
182 cd05604 STKc_SGK3 Catalytic do 99.9 6E-27 1.3E-31 247.7 11.6 192 425-635 1-247 (325)
183 cd05603 STKc_SGK2 Catalytic do 99.9 1E-26 2.3E-31 245.4 13.5 187 425-630 1-242 (321)
184 cd05075 PTKc_Axl Catalytic dom 99.9 3.8E-26 8.3E-31 234.7 17.3 205 422-639 2-271 (272)
185 cd06631 STKc_YSK4 Catalytic do 99.9 4.1E-26 8.9E-31 233.6 17.4 201 420-634 1-261 (265)
186 KOG4278 Protein tyrosine kinas 99.9 4E-27 8.7E-32 247.3 9.9 207 420-640 268-524 (1157)
187 KOG0600 Cdc2-related protein k 99.9 1.2E-26 2.7E-31 240.6 13.4 214 418-634 116-399 (560)
188 cd06639 STKc_myosinIIIB Cataly 99.9 2.4E-26 5.1E-31 239.0 15.8 215 409-634 12-286 (291)
189 cd07853 STKc_NLK Catalytic dom 99.9 1.6E-26 3.5E-31 249.1 15.0 212 420-635 1-288 (372)
190 cd05632 STKc_GRK5 Catalytic do 99.9 3.4E-26 7.3E-31 237.3 16.8 203 421-634 2-260 (285)
191 cd05582 STKc_RSK_N N-terminal 99.9 4.8E-27 1E-31 247.6 10.6 190 425-631 2-245 (318)
192 cd05046 PTK_CCK4 Pseudokinase 99.9 3.8E-26 8.2E-31 235.2 16.9 207 419-637 5-274 (275)
193 cd05100 PTKc_FGFR3 Catalytic d 99.9 2.7E-26 5.9E-31 243.6 16.2 209 419-640 12-294 (334)
194 cd06619 PKc_MKK5 Catalytic dom 99.9 3.2E-26 6.9E-31 236.6 16.2 205 419-635 1-253 (279)
195 KOG1025 Epidermal growth facto 99.9 4.3E-27 9.4E-32 254.5 9.9 207 423-645 700-963 (1177)
196 KOG0667 Dual-specificity tyros 99.9 1.4E-26 3.1E-31 248.5 13.8 214 420-635 187-502 (586)
197 cd07863 STKc_CDK4 Catalytic do 99.9 4.4E-26 9.4E-31 236.4 17.0 213 420-634 1-284 (288)
198 PHA03209 serine/threonine kina 99.9 8.3E-26 1.8E-30 242.2 19.4 152 416-570 63-256 (357)
199 cd06612 STKc_MST1_2 Catalytic 99.9 5.6E-26 1.2E-30 231.0 17.1 204 418-634 2-252 (256)
200 KOG1989 ARK protein kinase fam 99.9 2.1E-26 4.5E-31 254.8 14.9 207 417-640 35-312 (738)
201 PRK13184 pknD serine/threonine 99.9 4.3E-26 9.3E-31 261.6 18.0 211 419-640 2-291 (932)
202 cd06655 STKc_PAK2 Catalytic do 99.9 4.7E-26 1E-30 237.6 16.7 202 419-635 19-269 (296)
203 cd05079 PTKc_Jak1_rpt2 Catalyt 99.9 3.8E-26 8.2E-31 236.6 15.7 217 420-639 5-283 (284)
204 KOG0574 STE20-like serine/thre 99.9 8.7E-28 1.9E-32 233.4 3.2 203 420-635 34-283 (502)
205 cd00192 PTKc Catalytic domain 99.9 6.1E-26 1.3E-30 230.9 16.9 200 425-637 1-262 (262)
206 PF00069 Pkinase: Protein kina 99.9 2.4E-26 5.2E-31 234.2 13.8 204 421-634 1-256 (260)
207 cd05633 STKc_GRK3 Catalytic do 99.9 8.7E-26 1.9E-30 233.5 18.0 196 426-635 1-255 (279)
208 KOG2345 Serine/threonine prote 99.9 4.2E-27 9.1E-32 223.9 7.3 212 417-640 19-301 (302)
209 cd05625 STKc_LATS1 Catalytic d 99.9 1.8E-26 3.8E-31 249.8 13.1 151 420-573 2-251 (382)
210 cd07872 STKc_PCTAIRE2 Catalyti 99.9 8E-26 1.7E-30 237.3 17.7 213 419-634 6-285 (309)
211 PHA03390 pk1 serine/threonine- 99.9 1.2E-25 2.5E-30 231.0 18.4 209 413-634 8-261 (267)
212 cd08223 STKc_Nek4 Catalytic do 99.9 9.8E-26 2.1E-30 229.5 17.7 201 420-634 1-253 (257)
213 KOG0610 Putative serine/threon 99.9 3E-26 6.6E-31 232.6 13.6 203 419-634 77-391 (459)
214 KOG0659 Cdk activating kinase 99.9 2.6E-26 5.7E-31 220.6 12.5 214 419-635 2-281 (318)
215 cd07861 STKc_CDK1_euk Catalyti 99.9 5.2E-26 1.1E-30 235.4 15.7 214 420-634 1-281 (285)
216 cd05041 PTKc_Fes_like Catalyti 99.9 1E-25 2.3E-30 228.6 17.6 198 425-637 1-250 (251)
217 cd05083 PTKc_Chk Catalytic dom 99.9 5.9E-26 1.3E-30 231.1 15.7 204 419-638 6-253 (254)
218 cd08218 STKc_Nek1 Catalytic do 99.9 1.3E-25 2.8E-30 228.6 18.1 198 420-634 1-252 (256)
219 cd06656 STKc_PAK3 Catalytic do 99.9 8.3E-26 1.8E-30 235.9 17.0 201 419-634 19-268 (297)
220 cd06630 STKc_MEKK1 Catalytic d 99.9 1.1E-25 2.3E-30 230.7 17.5 203 420-634 1-263 (268)
221 cd06643 STKc_SLK Catalytic dom 99.9 6.6E-26 1.4E-30 234.5 16.0 202 421-635 7-262 (282)
222 cd06611 STKc_SLK_like Catalyti 99.9 6.9E-26 1.5E-30 234.0 16.0 205 418-635 4-262 (280)
223 cd05040 PTKc_Ack_like Catalyti 99.9 1.1E-25 2.4E-30 229.2 17.3 199 425-637 1-256 (257)
224 cd05044 PTKc_c-ros Catalytic d 99.9 6.7E-26 1.5E-30 232.5 15.7 201 425-638 1-269 (269)
225 cd05624 STKc_MRCK_beta Catalyt 99.9 3.7E-26 8.1E-31 242.3 14.3 206 419-635 1-266 (331)
226 cd05057 PTKc_EGFR_like Catalyt 99.9 1E-25 2.2E-30 232.7 17.1 207 419-641 7-270 (279)
227 cd05627 STKc_NDR2 Catalytic do 99.9 1.9E-26 4.2E-31 247.4 12.1 153 419-574 1-240 (360)
228 cd05058 PTKc_Met_Ron Catalytic 99.9 1.3E-25 2.8E-30 229.4 17.6 201 425-640 1-260 (262)
229 cd08220 STKc_Nek8 Catalytic do 99.9 1.1E-25 2.3E-30 229.0 16.8 201 420-634 1-252 (256)
230 cd05038 PTKc_Jak_rpt2 Catalyti 99.9 5.8E-26 1.3E-30 234.6 15.0 218 419-639 4-283 (284)
231 cd06628 STKc_MAPKKK_Byr2_like 99.9 1.2E-25 2.7E-30 230.2 17.2 198 421-634 2-263 (267)
232 cd06645 STKc_MAP4K3 Catalytic 99.9 7.8E-26 1.7E-30 231.8 15.7 204 419-634 9-264 (267)
233 cd06617 PKc_MKK3_6 Catalytic d 99.9 1E-25 2.2E-30 232.9 16.6 203 419-634 1-260 (283)
234 cd06610 STKc_OSR1_SPAK Catalyt 99.9 1.6E-25 3.6E-30 228.9 18.0 207 419-634 1-263 (267)
235 KOG0596 Dual specificity; seri 99.9 1.4E-26 3E-31 241.9 10.0 204 418-635 360-627 (677)
236 cd07846 STKc_CDKL2_3 Catalytic 99.9 2.9E-26 6.4E-31 237.3 12.4 213 419-634 1-282 (286)
237 cd05574 STKc_phototropin_like 99.9 1E-25 2.3E-30 237.1 16.7 203 419-634 1-288 (316)
238 cd07847 STKc_CDKL1_4 Catalytic 99.9 2.3E-25 5.1E-30 230.5 19.0 213 419-634 1-282 (286)
239 cd06608 STKc_myosinIII_like Ca 99.9 8.5E-26 1.8E-30 231.9 15.5 208 416-634 3-271 (275)
240 cd06644 STKc_STK10_LOK Catalyt 99.9 1.4E-25 3E-30 233.4 16.9 203 419-634 12-268 (292)
241 cd06622 PKc_MAPKK_PBS2_like Ca 99.9 8.9E-26 1.9E-30 233.9 15.4 207 419-635 1-262 (286)
242 cd06632 STKc_MEKK1_plant Catal 99.9 1.5E-25 3.2E-30 228.1 16.6 200 420-634 1-254 (258)
243 cd05056 PTKc_FAK Catalytic dom 99.9 1.5E-25 3.2E-30 230.3 16.6 206 419-640 6-266 (270)
244 cd08221 STKc_Nek9 Catalytic do 99.9 3.4E-25 7.4E-30 225.5 19.1 202 420-635 1-253 (256)
245 cd07876 STKc_JNK2 Catalytic do 99.9 1.7E-25 3.6E-30 240.1 17.6 213 417-635 19-315 (359)
246 PTZ00266 NIMA-related protein 99.9 9.2E-26 2E-30 259.9 16.4 207 415-634 9-294 (1021)
247 cd05623 STKc_MRCK_alpha Cataly 99.9 8E-26 1.7E-30 239.9 14.8 153 419-573 1-211 (332)
248 PHA03207 serine/threonine kina 99.9 1.8E-25 3.9E-30 242.7 17.8 214 418-635 91-375 (392)
249 cd06641 STKc_MST3 Catalytic do 99.9 2.3E-25 5E-30 229.9 17.7 198 421-635 6-253 (277)
250 cd05586 STKc_Sck1_like Catalyt 99.9 2.4E-26 5.2E-31 243.6 10.6 191 427-634 1-252 (330)
251 cd06629 STKc_MAPKKK_Bck1_like 99.9 1.8E-25 3.8E-30 229.9 16.7 204 420-634 2-268 (272)
252 cd06917 STKc_NAK1_like Catalyt 99.9 2.4E-25 5.2E-30 229.5 17.6 199 420-635 2-255 (277)
253 cd06621 PKc_MAPKK_Pek1_like Ca 99.9 6.3E-25 1.4E-29 227.9 20.8 212 419-634 1-265 (287)
254 cd07874 STKc_JNK3 Catalytic do 99.9 1.3E-25 2.8E-30 240.5 16.1 213 417-635 15-311 (355)
255 cd06613 STKc_MAP4K3_like Catal 99.9 2.4E-25 5.2E-30 227.2 17.2 206 418-634 2-259 (262)
256 cd05042 PTKc_Aatyk Catalytic d 99.9 1.6E-25 3.5E-30 229.9 16.0 204 425-637 1-268 (269)
257 PHA03211 serine/threonine kina 99.9 2.1E-25 4.5E-30 245.0 17.9 151 418-571 168-363 (461)
258 cd06651 STKc_MEKK3 Catalytic d 99.9 2.6E-25 5.6E-30 228.0 17.3 200 419-634 2-260 (266)
259 cd05609 STKc_MAST Catalytic do 99.9 1.8E-25 3.8E-30 234.2 16.3 205 419-638 1-273 (305)
260 KOG0585 Ca2+/calmodulin-depend 99.9 6.5E-26 1.4E-30 233.3 12.5 202 415-636 93-373 (576)
261 cd07833 STKc_CDKL Catalytic do 99.9 1.8E-25 3.9E-30 231.6 16.0 213 419-634 1-284 (288)
262 cd05606 STKc_beta_ARK Catalyti 99.9 3.2E-25 7E-30 229.1 17.8 196 426-635 1-255 (278)
263 cd06652 STKc_MEKK2 Catalytic d 99.9 3.5E-25 7.6E-30 226.8 17.6 200 419-634 2-260 (265)
264 KOG0663 Protein kinase PITSLRE 99.9 1.2E-25 2.5E-30 222.3 13.2 214 419-635 76-361 (419)
265 cd05597 STKc_DMPK_like Catalyt 99.9 1.5E-25 3.4E-30 237.6 15.3 153 419-573 1-211 (331)
266 cd05611 STKc_Rim15_like Cataly 99.9 1.6E-25 3.5E-30 228.6 14.8 201 425-638 2-251 (260)
267 cd06623 PKc_MAPKK_plant_like C 99.9 5.5E-25 1.2E-29 224.6 18.4 204 419-635 1-256 (264)
268 cd08225 STKc_Nek5 Catalytic do 99.9 2.2E-25 4.9E-30 226.7 15.4 201 420-634 1-253 (257)
269 cd05037 PTK_Jak_rpt1 Pseudokin 99.9 3.4E-25 7.4E-30 225.7 16.7 195 425-637 1-259 (259)
270 cd06658 STKc_PAK5 Catalytic do 99.9 1.2E-25 2.6E-30 234.1 13.6 198 423-635 26-272 (292)
271 cd06647 STKc_PAK_I Catalytic d 99.9 2.4E-25 5.1E-30 232.0 15.8 202 419-635 19-269 (293)
272 cd07875 STKc_JNK1 Catalytic do 99.9 1.7E-25 3.6E-30 240.5 15.1 213 417-635 22-318 (364)
273 cd07873 STKc_PCTAIRE1 Catalyti 99.9 2.9E-25 6.2E-30 232.1 16.3 213 419-634 6-285 (301)
274 KOG0658 Glycogen synthase kina 99.9 6.8E-26 1.5E-30 227.8 10.7 215 420-635 25-306 (364)
275 KOG1024 Receptor-like protein 99.9 1.6E-25 3.4E-30 225.0 13.0 217 411-640 276-556 (563)
276 cd06614 STKc_PAK Catalytic dom 99.9 5.7E-25 1.2E-29 228.0 17.3 206 417-635 17-270 (286)
277 cd08217 STKc_Nek2 Catalytic do 99.9 4.5E-25 9.9E-30 225.1 16.2 203 420-635 1-262 (265)
278 cd05086 PTKc_Aatyk2 Catalytic 99.9 3.9E-25 8.4E-30 227.1 15.8 204 425-637 1-267 (268)
279 cd07836 STKc_Pho85 Catalytic d 99.9 8.6E-25 1.9E-29 226.1 18.4 214 420-634 1-280 (284)
280 cd06626 STKc_MEKK4 Catalytic d 99.9 7.7E-25 1.7E-29 223.7 17.4 200 420-634 1-260 (264)
281 cd06605 PKc_MAPKK Catalytic do 99.9 4.9E-25 1.1E-29 225.4 15.7 204 419-635 1-257 (265)
282 KOG0032 Ca2+/calmodulin-depend 99.9 5.8E-25 1.3E-29 233.7 16.7 205 417-635 33-293 (382)
283 KOG0577 Serine/threonine prote 99.9 5E-26 1.1E-30 238.4 8.3 200 421-635 28-278 (948)
284 cd07841 STKc_CDK7 Catalytic do 99.9 7.1E-25 1.5E-29 228.6 17.0 213 420-635 1-282 (298)
285 cd05074 PTKc_Tyro3 Catalytic d 99.9 7E-25 1.5E-29 225.4 16.5 206 421-639 1-272 (273)
286 cd06607 STKc_TAO Catalytic dom 99.9 7.2E-25 1.6E-29 229.8 16.7 202 419-635 15-267 (307)
287 smart00219 TyrKc Tyrosine kina 99.9 9.1E-25 2E-29 222.1 16.8 201 422-636 2-258 (258)
288 KOG4717 Serine/threonine prote 99.9 3.3E-25 7.2E-30 228.9 13.4 205 420-640 19-277 (864)
289 cd07878 STKc_p38beta_MAPK11 Ca 99.9 3.2E-25 7E-30 236.2 13.9 214 416-635 12-298 (343)
290 KOG0199 ACK and related non-re 99.9 1.1E-25 2.4E-30 239.9 10.0 199 422-635 113-368 (1039)
291 cd07868 STKc_CDK8 Catalytic do 99.9 1.7E-24 3.6E-29 228.0 18.7 150 424-574 6-220 (317)
292 cd07837 STKc_CdkB_plant Cataly 99.9 7.1E-25 1.5E-29 228.2 15.6 215 419-634 1-290 (295)
293 cd05580 STKc_PKA Catalytic dom 99.9 1E-24 2.2E-29 226.7 16.6 199 419-634 1-253 (290)
294 cd07832 STKc_CCRK Catalytic do 99.9 1E-24 2.2E-29 225.7 16.5 212 420-634 1-281 (286)
295 cd07867 STKc_CDC2L6 Catalytic 99.9 1.5E-24 3.2E-29 228.3 17.8 148 425-573 7-219 (317)
296 cd06648 STKc_PAK_II Catalytic 99.9 1.2E-24 2.6E-29 225.7 16.8 199 421-634 21-268 (285)
297 cd06635 STKc_TAO1 Catalytic do 99.9 1.7E-24 3.7E-29 228.1 18.2 205 421-640 27-282 (317)
298 cd07831 STKc_MOK Catalytic dom 99.9 1.6E-24 3.5E-29 223.7 17.6 210 421-634 1-278 (282)
299 cd06659 STKc_PAK6 Catalytic do 99.9 4.8E-25 1E-29 230.1 13.7 197 424-635 26-271 (297)
300 cd07844 STKc_PCTAIRE_like Cata 99.9 1.7E-24 3.6E-29 225.0 17.7 213 419-634 5-287 (291)
301 cd07843 STKc_CDC2L1 Catalytic 99.9 1.1E-24 2.4E-29 226.6 16.0 213 419-634 5-289 (293)
302 cd08226 PK_STRAD_beta Pseudoki 99.9 1.4E-24 3.1E-29 229.8 17.0 210 425-635 4-308 (328)
303 KOG0594 Protein kinase PCTAIRE 99.9 1.1E-24 2.4E-29 219.4 14.9 216 419-635 11-302 (323)
304 cd06606 STKc_MAPKKK Catalytic 99.9 2.7E-24 5.8E-29 218.2 17.9 201 420-634 1-256 (260)
305 cd07839 STKc_CDK5 Catalytic do 99.9 1.2E-24 2.6E-29 225.1 15.5 212 420-634 1-280 (284)
306 cd07870 STKc_PFTAIRE2 Catalyti 99.9 2.8E-24 6E-29 223.4 18.2 213 417-634 3-287 (291)
307 KOG0986 G protein-coupled rece 99.9 1.9E-25 4E-30 228.4 8.5 199 417-629 183-435 (591)
308 cd07838 STKc_CDK4_6_like Catal 99.9 2.6E-24 5.5E-29 222.7 17.2 212 421-634 1-283 (287)
309 PHA02882 putative serine/threo 99.9 2.2E-24 4.7E-29 224.8 16.6 209 418-637 11-294 (294)
310 cd07860 STKc_CDK2_3 Catalytic 99.9 2E-24 4.3E-29 223.5 16.1 211 420-634 1-280 (284)
311 cd05122 PKc_STE Catalytic doma 99.9 4.1E-24 9E-29 215.9 18.0 200 420-634 1-250 (253)
312 cd05578 STKc_Yank1 Catalytic d 99.9 9.2E-25 2E-29 222.7 13.3 200 420-633 1-253 (258)
313 cd07830 STKc_MAK_like Catalyti 99.9 9.6E-25 2.1E-29 225.6 13.5 212 421-634 1-279 (283)
314 KOG0033 Ca2+/calmodulin-depend 99.9 3.8E-26 8.3E-31 216.6 2.7 198 418-634 10-266 (355)
315 cd07849 STKc_ERK1_2_like Catal 99.9 1.3E-24 2.9E-29 230.8 14.7 217 418-639 4-298 (336)
316 cd06616 PKc_MKK4 Catalytic dom 99.9 1.6E-24 3.5E-29 224.7 14.6 206 420-635 5-267 (288)
317 cd07835 STKc_CDK1_like Catalyt 99.9 1.2E-24 2.5E-29 225.1 13.5 212 421-634 1-279 (283)
318 cd05572 STKc_cGK_PKG Catalytic 99.9 2.7E-24 5.8E-29 219.8 15.9 189 427-628 1-240 (262)
319 cd08530 STKc_CNK2-like Catalyt 99.9 2.7E-24 5.8E-29 218.5 15.6 202 420-634 1-252 (256)
320 KOG0696 Serine/threonine prote 99.9 2.1E-25 4.6E-30 225.0 7.3 192 419-627 349-593 (683)
321 KOG0607 MAP kinase-interacting 99.9 5.2E-25 1.1E-29 216.0 9.4 202 424-634 83-360 (463)
322 KOG0579 Ste20-like serine/thre 99.9 2.4E-25 5.2E-30 234.5 7.1 203 419-634 32-288 (1187)
323 PLN00009 cyclin-dependent kina 99.9 3.5E-24 7.5E-29 223.0 15.8 214 419-634 2-283 (294)
324 cd07840 STKc_CDK9_like Catalyt 99.9 2.9E-24 6.2E-29 222.2 14.8 211 421-634 1-283 (287)
325 cd07842 STKc_CDK8_like Catalyt 99.9 7.2E-24 1.6E-28 222.7 18.0 214 420-634 1-312 (316)
326 cd06618 PKc_MKK7 Catalytic dom 99.9 2.9E-24 6.4E-29 223.9 14.6 204 419-635 15-273 (296)
327 cd05583 STKc_MSK_N N-terminal 99.9 4.6E-24 1E-28 221.4 15.8 207 420-639 1-267 (288)
328 cd07865 STKc_CDK9 Catalytic do 99.9 8.3E-24 1.8E-28 221.5 17.6 214 418-634 11-306 (310)
329 cd05577 STKc_GRK Catalytic dom 99.9 9.7E-24 2.1E-28 217.8 17.5 197 427-634 1-253 (277)
330 cd08222 STKc_Nek11 Catalytic d 99.9 3.1E-24 6.7E-29 219.1 13.6 202 420-634 1-256 (260)
331 cd06657 STKc_PAK4 Catalytic do 99.9 5.1E-24 1.1E-28 221.8 15.1 193 425-634 26-269 (292)
332 cd08215 STKc_Nek Catalytic dom 99.9 8.2E-24 1.8E-28 214.7 16.1 202 420-634 1-254 (258)
333 cd06627 STKc_Cdc7_like Catalyt 99.9 9.7E-24 2.1E-28 214.0 16.7 199 420-634 1-250 (254)
334 cd07864 STKc_CDK12 Catalytic d 99.9 7.9E-24 1.7E-28 221.0 16.3 215 416-634 4-298 (302)
335 cd06633 STKc_TAO3 Catalytic do 99.9 1E-23 2.3E-28 221.7 17.3 200 421-635 23-273 (313)
336 cd07845 STKc_CDK10 Catalytic d 99.9 8.9E-24 1.9E-28 221.7 16.5 215 418-635 6-290 (309)
337 cd07850 STKc_JNK Catalytic dom 99.9 7.7E-24 1.7E-28 226.6 16.2 213 417-635 14-311 (353)
338 cd06653 STKc_MEKK3_like_1 Cata 99.9 1.3E-23 2.8E-28 215.2 17.1 200 419-634 2-260 (264)
339 cd06634 STKc_TAO2 Catalytic do 99.9 9.9E-24 2.2E-28 221.4 16.1 202 420-636 16-268 (308)
340 KOG0611 Predicted serine/threo 99.9 2E-24 4.3E-29 217.6 10.1 198 419-635 53-303 (668)
341 cd07856 STKc_Sty1_Hog1 Catalyt 99.9 1.3E-23 2.9E-28 222.5 17.1 217 414-635 5-288 (328)
342 cd07852 STKc_MAPK15 Catalytic 99.9 6.4E-24 1.4E-28 225.7 14.7 214 417-635 5-295 (337)
343 cd07866 STKc_BUR1 Catalytic do 99.9 8E-24 1.7E-28 221.8 15.2 214 418-634 7-307 (311)
344 KOG4645 MAPKKK (MAP kinase kin 99.9 1.6E-25 3.5E-30 253.6 2.3 205 416-635 1232-1494(1509)
345 cd05613 STKc_MSK1_N N-terminal 99.9 1.4E-23 3.1E-28 217.9 16.6 200 420-634 1-267 (290)
346 KOG0200 Fibroblast/platelet-de 99.9 5.8E-24 1.3E-28 241.4 14.8 211 417-639 294-579 (609)
347 cd07879 STKc_p38delta_MAPK13 C 99.9 9.8E-24 2.1E-28 224.8 15.6 216 418-640 14-304 (342)
348 cd05581 STKc_PDK1 Catalytic do 99.9 5.1E-24 1.1E-28 219.5 12.9 199 419-634 1-276 (280)
349 cd07858 STKc_TEY_MAPK_plant Ca 99.9 5.8E-24 1.2E-28 226.1 13.4 218 418-639 4-297 (337)
350 cd07855 STKc_ERK5 Catalytic do 99.9 6E-24 1.3E-28 225.7 13.3 214 418-635 4-294 (334)
351 cd05118 STKc_CMGC Catalytic do 99.9 1.1E-23 2.3E-28 217.6 14.7 211 421-634 1-279 (283)
352 cd05576 STKc_RPK118_like Catal 99.9 8.1E-24 1.8E-28 213.3 13.1 181 430-631 4-225 (237)
353 KOG0599 Phosphorylase kinase g 99.9 2.6E-24 5.7E-29 206.9 8.8 203 419-634 17-282 (411)
354 cd05579 STKc_MAST_like Catalyt 99.9 7.1E-24 1.5E-28 216.3 12.1 195 427-638 1-257 (265)
355 KOG0660 Mitogen-activated prot 99.9 8E-24 1.7E-28 212.5 12.0 214 418-635 21-310 (359)
356 KOG0612 Rho-associated, coiled 99.9 1.3E-24 2.7E-29 243.5 6.3 159 411-572 67-283 (1317)
357 KOG0671 LAMMER dual specificit 99.9 2.5E-24 5.4E-29 216.8 7.8 214 418-634 88-405 (415)
358 cd08216 PK_STRAD Pseudokinase 99.9 2.3E-23 5.1E-28 218.9 15.4 207 425-635 8-295 (314)
359 PTZ00024 cyclin-dependent prot 99.9 2.2E-23 4.7E-28 221.4 14.8 213 419-635 8-313 (335)
360 cd07834 STKc_MAPK Catalytic do 99.9 1.8E-23 3.9E-28 221.4 14.1 217 420-640 1-296 (330)
361 cd07829 STKc_CDK_like Catalyti 99.9 2.6E-23 5.6E-28 214.6 14.6 211 421-634 1-278 (282)
362 cd07854 STKc_MAPK4_6 Catalytic 99.9 3.6E-23 7.8E-28 220.5 16.0 211 419-634 5-299 (342)
363 cd07877 STKc_p38alpha_MAPK14 C 99.9 6E-23 1.3E-27 219.0 17.3 219 411-635 9-300 (345)
364 cd07880 STKc_p38gamma_MAPK12 C 99.9 1.2E-22 2.7E-27 216.4 18.5 214 416-634 12-297 (343)
365 PLN03225 Serine/threonine-prot 99.9 6.9E-23 1.5E-27 230.5 16.9 214 417-635 130-450 (566)
366 KOG0690 Serine/threonine prote 99.9 3.8E-24 8.3E-29 210.2 5.7 194 417-627 166-411 (516)
367 cd07851 STKc_p38 Catalytic dom 99.9 2.2E-23 4.8E-28 222.2 11.2 212 417-634 13-297 (343)
368 KOG4250 TANK binding protein k 99.9 1.4E-23 3.1E-28 226.1 9.6 155 422-576 16-230 (732)
369 cd07857 STKc_MPK1 Catalytic do 99.9 2.9E-22 6.3E-27 212.6 19.0 211 420-634 1-291 (332)
370 KOG0604 MAP kinase-activated p 99.9 2.5E-23 5.4E-28 202.9 9.6 207 417-634 59-321 (400)
371 KOG0584 Serine/threonine prote 99.9 4.8E-23 1E-27 219.5 11.0 192 424-635 45-296 (632)
372 cd05123 STKc_AGC Catalytic dom 99.9 1.4E-22 3E-27 205.3 13.8 188 427-631 1-240 (250)
373 KOG0587 Traf2- and Nck-interac 99.9 7.1E-23 1.5E-27 224.7 12.2 214 409-634 9-281 (953)
374 KOG0603 Ribosomal protein S6 k 99.9 1.4E-22 3.1E-27 216.9 13.1 198 418-634 321-562 (612)
375 PHA03210 serine/threonine kina 99.9 2.7E-22 5.8E-27 224.1 15.5 218 417-635 146-454 (501)
376 cd05610 STKc_MASTL Catalytic d 99.9 3.8E-22 8.3E-27 229.8 16.2 103 418-523 3-131 (669)
377 PF01453 B_lectin: D-mannose b 99.9 9E-24 2E-28 186.1 2.0 100 84-184 2-114 (114)
378 KOG0695 Serine/threonine prote 99.9 1E-22 2.2E-27 200.7 8.9 201 417-627 248-502 (593)
379 KOG0586 Serine/threonine prote 99.9 3.1E-22 6.6E-27 213.2 12.1 200 417-635 54-306 (596)
380 PLN03224 probable serine/threo 99.9 9.4E-22 2E-26 216.2 14.6 213 417-634 143-499 (507)
381 KOG1035 eIF-2alpha kinase GCN2 99.9 5.3E-22 1.2E-26 224.3 10.1 152 468-634 671-870 (1351)
382 smart00220 S_TKc Serine/Threon 99.9 4.3E-21 9.3E-26 192.3 14.4 186 431-634 1-240 (244)
383 KOG0983 Mitogen-activated prot 99.9 7.9E-22 1.7E-26 190.1 8.4 201 422-635 95-349 (391)
384 KOG0608 Warts/lats-like serine 99.9 2.5E-21 5.5E-26 204.7 12.2 205 409-627 616-917 (1034)
385 KOG1151 Tousled-like protein k 99.8 8E-22 1.7E-26 200.7 4.5 205 419-634 463-740 (775)
386 smart00750 KIND kinase non-cat 99.8 1.5E-20 3.2E-25 180.2 13.1 155 478-640 1-170 (176)
387 KOG0614 cGMP-dependent protein 99.8 3.2E-22 7E-27 207.0 1.3 201 419-634 420-676 (732)
388 KOG1006 Mitogen-activated prot 99.8 6.4E-22 1.4E-26 190.2 -0.0 206 422-635 67-327 (361)
389 KOG0666 Cyclin C-dependent kin 99.8 1E-20 2.2E-25 185.6 8.2 155 418-573 23-243 (438)
390 KOG1290 Serine/threonine prote 99.8 3.1E-19 6.7E-24 184.7 16.8 107 418-526 77-218 (590)
391 KOG0195 Integrin-linked kinase 99.8 2E-20 4.4E-25 180.1 6.9 202 424-639 195-446 (448)
392 KOG4236 Serine/threonine prote 99.8 1.7E-20 3.6E-25 194.8 6.2 148 424-573 569-769 (888)
393 KOG1027 Serine/threonine prote 99.8 2.8E-20 6E-25 203.6 6.8 198 421-633 511-765 (903)
394 cd00028 B_lectin Bulb-type man 99.8 4.5E-19 9.8E-24 157.6 13.2 103 38-150 2-104 (116)
395 KOG0669 Cyclin T-dependent kin 99.8 8.3E-21 1.8E-25 181.1 0.8 213 420-635 18-315 (376)
396 smart00108 B_lectin Bulb-type 99.8 1.6E-18 3.4E-23 153.6 12.9 102 38-150 2-103 (114)
397 PLN00181 protein SPA1-RELATED; 99.8 1.9E-19 4.1E-24 212.4 8.5 152 466-635 53-265 (793)
398 KOG0662 Cyclin-dependent kinas 99.8 6.9E-19 1.5E-23 160.0 9.6 160 420-582 3-215 (292)
399 cd00180 PKc Catalytic domain o 99.8 6.6E-18 1.4E-22 164.7 16.3 162 427-635 1-214 (215)
400 KOG0576 Mitogen-activated prot 99.8 1.5E-19 3.2E-24 193.2 3.7 205 417-634 13-270 (829)
401 KOG0664 Nemo-like MAPK-related 99.8 1E-19 2.2E-24 175.4 0.2 210 423-636 57-344 (449)
402 KOG1167 Serine/threonine prote 99.7 1.5E-18 3.2E-23 177.7 8.0 155 413-573 30-281 (418)
403 KOG1152 Signal transduction se 99.7 1.1E-18 2.5E-23 183.5 7.0 150 419-571 561-770 (772)
404 KOG0668 Casein kinase II, alph 99.7 5.2E-18 1.1E-22 160.0 8.3 211 418-634 37-321 (338)
405 KOG0984 Mitogen-activated prot 99.7 3.9E-18 8.5E-23 158.7 7.3 157 415-572 42-254 (282)
406 smart00221 STYKc Protein kinas 99.7 5.1E-17 1.1E-21 161.2 14.1 149 421-572 1-202 (225)
407 KOG0670 U4/U6-associated splic 99.7 5.7E-18 1.2E-22 176.2 4.4 159 416-575 429-640 (752)
408 KOG1345 Serine/threonine kinas 99.7 1.7E-17 3.7E-22 160.3 5.8 206 419-635 24-284 (378)
409 KOG0665 Jun-N-terminal kinase 99.6 2.7E-16 5.8E-21 155.7 7.1 210 419-635 17-310 (369)
410 KOG1023 Natriuretic peptide re 99.5 1.2E-13 2.6E-18 148.8 10.9 184 452-641 6-226 (484)
411 KOG1164 Casein kinase (serine/ 99.5 1.1E-12 2.3E-17 138.6 17.3 210 420-640 19-298 (322)
412 COG0515 SPS1 Serine/threonine 99.4 1.3E-11 2.9E-16 128.2 18.6 211 421-635 2-275 (384)
413 KOG0590 Checkpoint kinase and 99.4 1.8E-13 3.8E-18 154.2 3.5 203 423-635 322-585 (601)
414 KOG1163 Casein kinase (serine/ 99.3 2.8E-12 6.2E-17 122.5 9.2 154 418-574 14-225 (341)
415 KOG1240 Protein kinase contain 99.3 9.3E-13 2E-17 148.7 5.2 202 420-640 24-296 (1431)
416 KOG1166 Mitotic checkpoint ser 99.3 8.9E-12 1.9E-16 143.5 10.0 154 413-569 692-902 (974)
417 KOG0606 Microtubule-associated 99.3 4.5E-12 9.8E-17 143.2 7.0 183 418-629 82-306 (1205)
418 KOG4158 BRPK/PTEN-induced prot 99.3 1.4E-11 3E-16 125.5 8.8 153 467-636 317-511 (598)
419 KOG0603 Ribosomal protein S6 k 99.2 4.5E-12 9.7E-17 136.8 5.2 142 426-572 1-193 (612)
420 KOG1033 eIF-2alpha kinase PEK/ 99.2 4.3E-12 9.4E-17 134.4 4.6 96 467-565 330-457 (516)
421 KOG1165 Casein kinase (serine/ 99.2 1.9E-11 4.1E-16 122.0 8.1 152 420-574 29-240 (449)
422 PF14531 Kinase-like: Kinase-l 99.2 6.1E-11 1.3E-15 120.5 10.4 186 422-626 15-288 (288)
423 PRK09188 serine/threonine prot 99.2 5.7E-11 1.2E-15 125.9 8.8 98 415-526 14-142 (365)
424 cd05147 RIO1_euk RIO kinase fa 99.0 4.7E-10 1E-14 108.9 8.3 101 424-527 2-149 (190)
425 PRK10359 lipopolysaccharide co 99.0 5.1E-10 1.1E-14 110.5 6.9 136 417-564 29-216 (232)
426 cd05145 RIO1_like RIO kinase f 99.0 1.7E-09 3.7E-14 105.1 9.1 101 424-527 2-149 (190)
427 smart00090 RIO RIO-like kinase 98.8 7.4E-09 1.6E-13 104.1 7.8 104 420-527 29-180 (237)
428 PF00954 S_locus_glycop: S-loc 98.7 1.9E-08 4.2E-13 88.3 5.9 55 218-276 1-57 (110)
429 PRK10345 hypothetical protein; 98.7 4.9E-08 1.1E-12 95.9 8.9 98 422-527 5-136 (210)
430 KOG1266 Protein kinase [Signal 98.7 1.8E-08 3.9E-13 101.0 5.7 154 466-635 145-331 (458)
431 PRK14879 serine/threonine prot 98.7 6.4E-08 1.4E-12 95.5 8.9 95 425-527 2-126 (211)
432 TIGR03724 arch_bud32 Kae1-asso 98.6 1.1E-07 2.5E-12 92.8 7.7 91 426-527 1-121 (199)
433 cd05144 RIO2_C RIO kinase fami 98.6 5.6E-08 1.2E-12 95.1 5.0 106 412-527 8-156 (198)
434 PRK09605 bifunctional UGMP fam 98.6 1.2E-07 2.7E-12 107.1 8.4 99 418-528 332-460 (535)
435 PRK12274 serine/threonine prot 98.5 4.7E-07 1E-11 87.9 10.6 135 423-572 6-209 (218)
436 cd05119 RIO RIO kinase family, 98.5 1.8E-07 3.9E-12 90.3 7.0 100 424-527 2-146 (187)
437 KOG0590 Checkpoint kinase and 98.4 4.7E-08 1E-12 110.6 -0.2 205 420-634 21-285 (601)
438 KOG0601 Cyclin-dependent kinas 98.1 4.1E-06 8.9E-11 91.2 5.3 197 421-634 116-378 (524)
439 TIGR01982 UbiB 2-polyprenylphe 98.0 1.5E-05 3.2E-10 87.5 8.3 99 424-527 122-288 (437)
440 cd05120 APH_ChoK_like Aminogly 98.0 3.4E-05 7.4E-10 70.7 9.1 94 423-527 2-120 (155)
441 KOG0606 Microtubule-associated 97.9 6.9E-06 1.5E-10 94.2 3.9 155 417-574 802-1039(1205)
442 PRK01723 3-deoxy-D-manno-octul 97.9 7.7E-05 1.7E-09 75.1 10.3 94 425-527 37-173 (239)
443 KOG0601 Cyclin-dependent kinas 97.8 1.4E-05 3E-10 87.1 3.4 202 417-638 263-517 (524)
444 smart00108 B_lectin Bulb-type 97.7 0.00015 3.2E-09 64.1 7.6 73 110-204 29-103 (114)
445 PRK04750 ubiB putative ubiquin 97.5 0.00026 5.7E-09 79.0 7.6 35 419-454 120-155 (537)
446 cd00028 B_lectin Bulb-type man 97.4 0.00061 1.3E-08 60.4 7.8 82 110-221 30-113 (116)
447 cd05146 RIO3_euk RIO kinase fa 97.1 0.0022 4.7E-08 62.2 8.5 95 425-527 3-156 (197)
448 cd05151 ChoK Choline Kinase (C 97.0 0.0023 5E-08 60.3 8.2 90 424-527 3-119 (170)
449 cd05154 ACAD10_11_like Acyl-Co 97.0 0.0021 4.5E-08 63.4 7.7 88 425-516 4-119 (223)
450 COG4248 Uncharacterized protei 96.9 0.006 1.3E-07 64.2 10.7 172 468-639 85-300 (637)
451 cd00129 PAN_APPLE PAN/APPLE-li 96.9 0.0005 1.1E-08 56.2 2.0 40 277-320 35-79 (80)
452 PF08276 PAN_2: PAN-like domai 96.8 0.00037 8.1E-09 54.8 0.7 27 277-303 37-63 (66)
453 PF01453 B_lectin: D-mannose b 96.6 0.016 3.4E-07 51.1 9.6 84 45-146 12-98 (114)
454 KOG2137 Protein kinase [Signal 96.5 0.00054 1.2E-08 76.2 -0.9 128 497-634 100-264 (700)
455 KOG1243 Protein kinase [Genera 96.4 0.0085 1.8E-07 66.7 7.6 131 426-566 33-199 (690)
456 KOG3741 Poly(A) ribonuclease s 95.9 0.11 2.4E-06 56.5 12.7 135 432-569 289-475 (655)
457 COG3642 Mn2+-dependent serine/ 95.5 0.058 1.2E-06 51.2 7.9 92 425-527 2-123 (204)
458 KOG3087 Serine/threonine prote 95.4 0.086 1.9E-06 50.0 8.5 103 423-527 11-144 (229)
459 COG0661 AarF Predicted unusual 95.3 0.054 1.2E-06 60.3 8.5 97 425-526 131-295 (517)
460 cd01098 PAN_AP_plant Plant PAN 95.3 0.011 2.3E-07 48.7 2.2 42 277-322 42-84 (84)
461 PRK15123 lipopolysaccharide co 95.1 0.19 4.1E-06 51.4 11.1 60 467-527 109-169 (268)
462 KOG1235 Predicted unusual prot 94.4 0.12 2.6E-06 57.6 8.0 31 424-454 166-196 (538)
463 PF01163 RIO1: RIO1 family; I 94.4 0.11 2.4E-06 50.1 6.8 56 467-527 80-138 (188)
464 PF06176 WaaY: Lipopolysacchar 94.0 0.38 8.3E-06 47.3 9.6 99 417-527 29-166 (229)
465 KOG1093 Predicted protein kina 93.7 0.05 1.1E-06 59.1 3.1 80 549-631 110-190 (725)
466 KOG1035 eIF-2alpha kinase GCN2 91.6 0.46 9.9E-06 56.7 7.5 156 455-636 244-435 (1351)
467 KOG0576 Mitogen-activated prot 90.9 0.023 4.9E-07 63.1 -3.6 146 423-570 246-430 (829)
468 PF13095 FTA2: Kinetochore Sim 90.8 1.7 3.7E-05 42.2 9.4 42 404-451 27-69 (207)
469 COG0478 RIO-like serine/threon 89.7 0.65 1.4E-05 46.9 5.7 99 421-527 93-233 (304)
470 PF06293 Kdo: Lipopolysacchari 89.5 0.69 1.5E-05 45.3 5.8 58 467-527 91-149 (206)
471 PF01636 APH: Phosphotransfera 87.0 5 0.00011 39.3 10.3 82 424-515 2-108 (239)
472 PRK10593 hypothetical protein; 86.8 2.5 5.4E-05 44.0 8.3 83 424-515 19-127 (297)
473 TIGR02172 Fb_sc_TIGR02172 Fibr 86.8 3.2 6.9E-05 41.3 8.7 81 425-515 7-110 (226)
474 COG1718 RIO1 Serine/threonine 86.5 3.1 6.7E-05 41.7 8.1 123 407-533 33-204 (268)
475 PRK09902 hypothetical protein; 86.3 6.5 0.00014 38.6 10.2 98 427-527 26-159 (216)
476 PLN02876 acyl-CoA dehydrogenas 85.8 2.9 6.3E-05 50.1 9.2 87 424-515 43-161 (822)
477 PF03109 ABC1: ABC1 family; I 85.6 0.24 5.3E-06 43.9 -0.0 31 424-454 16-46 (119)
478 PF12273 RCR: Chitin synthesis 85.0 0.63 1.4E-05 42.0 2.3 9 328-336 1-9 (130)
479 KOG2270 Serine/threonine prote 82.4 3.6 7.7E-05 43.6 6.7 101 424-527 149-296 (520)
480 PF12260 PIP49_C: Protein-kina 72.0 5.8 0.00013 38.2 4.7 69 454-526 21-92 (188)
481 cd05150 APH Aminoglycoside 3'- 67.5 23 0.00049 35.3 8.1 80 426-515 5-105 (244)
482 PRK09550 mtnK methylthioribose 66.7 21 0.00045 38.8 8.0 80 424-513 31-144 (401)
483 COG2112 Predicted Ser/Thr prot 66.5 7.4 0.00016 37.0 3.9 56 424-484 27-103 (201)
484 cd05157 ETNK_euk Ethanolamine 64.4 30 0.00065 34.1 8.3 78 424-516 3-104 (235)
485 KOG1236 Predicted unusual prot 58.5 18 0.0004 39.0 5.5 55 468-526 320-375 (565)
486 KOG4649 PQQ (pyrrolo-quinoline 56.6 36 0.00078 34.2 6.8 47 82-128 167-216 (354)
487 smart00473 PAN_AP divergent su 50.0 12 0.00026 29.4 2.1 25 277-303 35-61 (78)
488 PF12273 RCR: Chitin synthesis 47.3 14 0.0003 33.2 2.3 11 334-344 4-14 (130)
489 PF03881 Fructosamin_kin: Fruc 47.0 74 0.0016 32.9 7.8 74 423-514 21-116 (288)
490 PF10707 YrbL-PhoP_reg: PhoP r 40.5 1.5E+02 0.0033 28.7 8.5 94 424-527 6-149 (199)
491 PF04655 APH_6_hur: Aminoglyco 39.7 66 0.0014 32.6 6.0 79 425-514 8-107 (253)
492 PF15102 TMEM154: TMEM154 prot 38.8 17 0.00037 33.1 1.4 13 345-357 76-88 (146)
493 PLN02756 S-methyl-5-thioribose 38.7 1.4E+02 0.0031 32.6 8.6 81 424-511 37-151 (418)
494 PF02009 Rifin_STEVOR: Rifin/s 38.6 17 0.00037 37.6 1.6 16 342-357 272-287 (299)
495 TIGR01478 STEVOR variant surfa 38.3 16 0.00036 36.9 1.3 16 341-356 273-288 (295)
496 PTZ00370 STEVOR; Provisional 37.4 17 0.00038 36.8 1.3 16 341-356 269-284 (296)
497 PF04478 Mid2: Mid2 like cell 37.1 19 0.00041 33.0 1.4 7 330-336 50-57 (154)
498 PF11883 DUF3403: Domain of un 36.4 20 0.00044 26.1 1.2 17 647-663 4-20 (48)
499 PF01436 NHL: NHL repeat; Int 34.6 58 0.0013 20.4 3.0 21 103-124 6-26 (28)
500 cd05156 ChoK_euk Choline Kinas 32.7 1E+02 0.0023 31.6 6.4 76 424-514 3-107 (302)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-42 Score=363.43 Aligned_cols=235 Identities=42% Similarity=0.740 Sum_probs=205.8
Q ss_pred ccccccHHHHHHHhcCccccceeccCCCcCEEEEEEcCCcEEEEEeccc----------------------ceEEEEeEe
Q 040814 405 ELKGFNFQTIAAATNNFSTTNKLGEGGFGPVYKGKLLDGQVIAVKRLSG----------------------RTIRLMGCS 462 (664)
Q Consensus 405 ~~~~~~~~~i~~~t~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~----------------------~~v~l~g~~ 462 (664)
..+.|++.++..||++|...+.||+|+||.||+|.+++++.||||++.. |+|+|+|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 5678999999999999999999999999999999999999999997742 469999999
Q ss_pred ecCC-eeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcC---ccccccccccc-----------
Q 040814 463 LHGA-ERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYS---RLRMNESKVNT----------- 527 (664)
Q Consensus 463 ~~~~-~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~---~~h~d~~~~n~----------- 527 (664)
.+++ +.+||||||++|+|+++|+..... .|+|.+|++||.++|+||+|||+.+ ++|+|+++.|.
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKls 219 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLS 219 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEcc
Confidence 9999 599999999999999999875433 8999999999999999999999976 89999888771
Q ss_pred -------ccc---------cccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhh---HHhc
Q 040814 528 -------NRV---------VGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGY---LWKE 588 (664)
Q Consensus 528 -------~~~---------~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~---~~~~ 588 (664)
... .||.+|+|||++..+..+.|+|||||||+|+||+||+++.+.........++.| .+.+
T Consensus 220 DFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~ 299 (361)
T KOG1187|consen 220 DFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEE 299 (361)
T ss_pred CccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHC
Confidence 111 799999999999999999999999999999999999999876543333345554 5677
Q ss_pred CChhHhhhhhhC-CCCCH-HHHHHHHHHHHhcccccCCCCCCHHHHHHHHhccc
Q 040814 589 GKASELMEAALD-GPCPE-NELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNN 640 (664)
Q Consensus 589 ~~~~~~~d~~~~-~~~~~-~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 640 (664)
++..+++|+.+. ..++. +++.++..++++|++.+|.+||+|.||+++|+.+.
T Consensus 300 ~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 300 GKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred cchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 789999999987 66664 78999999999999999999999999999997665
No 2
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-35 Score=309.57 Aligned_cols=209 Identities=30% Similarity=0.458 Sum_probs=174.2
Q ss_pred ccceeccCCCcCEEEEEEcCCcEEEEEecc------------------------cceEEEEeEeecCC-eeEEEEeccCC
Q 040814 423 TTNKLGEGGFGPVYKGKLLDGQVIAVKRLS------------------------GRTIRLMGCSLHGA-ERILVYEFMPN 477 (664)
Q Consensus 423 ~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~------------------------~~~v~l~g~~~~~~-~~~lV~Ey~~~ 477 (664)
..+.||+|+||+||+|.++....||||++. +|+|+++|.|.+.. ..+||||||++
T Consensus 45 ~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~ 124 (362)
T KOG0192|consen 45 IEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPG 124 (362)
T ss_pred hhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCC
Confidence 346699999999999999544449999775 35899999999988 79999999999
Q ss_pred CchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcC-cccccccccc---------------------------ccc
Q 040814 478 KSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYS-RLRMNESKVN---------------------------TNR 529 (664)
Q Consensus 478 gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~-~~h~d~~~~n---------------------------~~~ 529 (664)
|+|.++|+.. ....+++..+++|+.|||+||.|||+.+ ++|+|+++.| ...
T Consensus 125 GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~~ 203 (362)
T KOG0192|consen 125 GSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSMTS 203 (362)
T ss_pred CcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeeccccccccC
Confidence 9999999764 4678999999999999999999999999 8999999987 112
Q ss_pred ccccCCccchhhhc--cCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHH
Q 040814 530 VVGTYGYMAPEYAM--NGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENE 607 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~--~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 607 (664)
..||+.|||||++. ...|+.|+|||||||+||||+||+.||......+ . ...++....+...+..+
T Consensus 204 ~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~---~---------~~~v~~~~~Rp~~p~~~ 271 (362)
T KOG0192|consen 204 VAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQ---V---------ASAVVVGGLRPPIPKEC 271 (362)
T ss_pred CCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHH---H---------HHHHHhcCCCCCCCccC
Confidence 46999999999999 5689999999999999999999999997554311 1 12223334445555667
Q ss_pred HHHHHHHHHhcccccCCCCCCHHHHHHHHhccccccc
Q 040814 608 LLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQHFS 644 (664)
Q Consensus 608 ~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~ 644 (664)
...+..++.+||+.||+.||++.+|+.+|+.+..++.
T Consensus 272 ~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~ 308 (362)
T KOG0192|consen 272 PPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHIS 308 (362)
T ss_pred CHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhc
Confidence 7788899999999999999999999999998775443
No 3
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-33 Score=279.42 Aligned_cols=200 Identities=26% Similarity=0.320 Sum_probs=167.4
Q ss_pred cccceeccCCCcCEEEEEEc-CCcEEEEEeccc-----------------------ceEEEEeEeecCC-eeEEEEeccC
Q 040814 422 STTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-----------------------RTIRLMGCSLHGA-ERILVYEFMP 476 (664)
Q Consensus 422 ~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-----------------------~~v~l~g~~~~~~-~~~lV~Ey~~ 476 (664)
+..+.||+|..|+|||++++ +++.+|+|+++. .+|+++|.|.++. +..|+||||.
T Consensus 82 e~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMD 161 (364)
T KOG0581|consen 82 ERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMD 161 (364)
T ss_pred hhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcC
Confidence 33589999999999999985 489999999942 2799999999988 5999999999
Q ss_pred CCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhh-cCcccccccccc------------------------ccccc
Q 040814 477 NKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK-YSRLRMNESKVN------------------------TNRVV 531 (664)
Q Consensus 477 ~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~-~~~~h~d~~~~n------------------------~~~~~ 531 (664)
+|||+.++. ..+.+++...-+|+.+|++||.|||+ .+++|+|+||.| .+..+
T Consensus 162 gGSLd~~~k---~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~tfv 238 (364)
T KOG0581|consen 162 GGSLDDILK---RVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANTFV 238 (364)
T ss_pred CCCHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhhhccccc
Confidence 999999993 34789999999999999999999995 999999999988 35578
Q ss_pred ccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCC---CCCHH-H
Q 040814 532 GTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDG---PCPEN-E 607 (664)
Q Consensus 532 Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~-~ 607 (664)
||..|||||.+.+..|+.++||||||+.++|+.+|+.|+...... .....++++.+..+ ..|.. .
T Consensus 239 GT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~-----------~~~~~~Ll~~Iv~~ppP~lP~~~f 307 (364)
T KOG0581|consen 239 GTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPP-----------YLDIFELLCAIVDEPPPRLPEGEF 307 (364)
T ss_pred ccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCC-----------CCCHHHHHHHHhcCCCCCCCcccC
Confidence 999999999999999999999999999999999999998654111 11233444444432 23343 6
Q ss_pred HHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 608 LLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 608 ~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
..++..++..||++||.+||++.|+++.
T Consensus 308 S~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 308 SPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred CHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 6778888889999999999999999754
No 4
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.98 E-value=1.3e-32 Score=289.04 Aligned_cols=205 Identities=28% Similarity=0.388 Sum_probs=174.3
Q ss_pred cccceeccCCCcCEEEEEEcCCcEEEEEeccc---------------------ceEEEEeEeecCCeeEEEEeccCCCch
Q 040814 422 STTNKLGEGGFGPVYKGKLLDGQVIAVKRLSG---------------------RTIRLMGCSLHGAERILVYEFMPNKSL 480 (664)
Q Consensus 422 ~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~---------------------~~v~l~g~~~~~~~~~lV~Ey~~~gsL 480 (664)
...+.||+|.||.||.|.++....||+|.+.. ++|+++|+|..++..+||||||+.|+|
T Consensus 209 ~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsL 288 (468)
T KOG0197|consen 209 KLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSL 288 (468)
T ss_pred HHHHHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcH
Confidence 34589999999999999997777899998753 489999999999999999999999999
Q ss_pred hHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc---------------cc------------ccc
Q 040814 481 DFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN---------------RV------------VGT 533 (664)
Q Consensus 481 ~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~---------------~~------------~Gt 533 (664)
.+||.+ ..+..+...+.+.++.|||+||+||++++.+|+|+...|.- +. .-.
T Consensus 289 l~yLr~-~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfP 367 (468)
T KOG0197|consen 289 LDYLRT-REGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKFP 367 (468)
T ss_pred HHHhhh-cCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCCCC
Confidence 999965 34678999999999999999999999999999998877610 00 123
Q ss_pred CCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHH
Q 040814 534 YGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRCI 612 (664)
Q Consensus 534 ~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~ 612 (664)
..|.|||.+..+.|+.|||||||||+||||+| |+.|+...... +..+.++...+-+.|..++..+.
T Consensus 368 IkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~-------------ev~~~le~GyRlp~P~~CP~~vY 434 (468)
T KOG0197|consen 368 IKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNE-------------EVLELLERGYRLPRPEGCPDEVY 434 (468)
T ss_pred ceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHH-------------HHHHHHhccCcCCCCCCCCHHHH
Confidence 46999999999999999999999999999999 88886544322 23345556666678888999999
Q ss_pred HHHHhcccccCCCCCCHHHHHHHHhccc
Q 040814 613 HAGLLCVHDQAVNRPTMADVVSCLRQNN 640 (664)
Q Consensus 613 ~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 640 (664)
++|..||+.+|++|||++.+...|+.+.
T Consensus 435 ~lM~~CW~~~P~~RPtF~~L~~~l~~~~ 462 (468)
T KOG0197|consen 435 ELMKSCWHEDPEDRPTFETLREVLEDFF 462 (468)
T ss_pred HHHHHHhhCCcccCCCHHHHHHHHHHhh
Confidence 9999999999999999999999988775
No 5
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.98 E-value=6.5e-32 Score=286.38 Aligned_cols=198 Identities=21% Similarity=0.310 Sum_probs=170.3
Q ss_pred cCccccceeccCCCcCEEEEEE-cCCcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKL-LDGQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVY 472 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~ 472 (664)
..|...+.||+|||+.+|.++. ..|+.||+|++.+ ++|++++++.+.++.|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 4688899999999999999998 6699999999853 4799999999999999999
Q ss_pred eccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc--------------------------
Q 040814 473 EFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN-------------------------- 526 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n-------------------------- 526 (664)
|+|++++|..++ ++++.+++.++..+++||+.||.|||+.+++|+|++..|
T Consensus 98 ELC~~~sL~el~---Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Er 174 (592)
T KOG0575|consen 98 ELCHRGSLMELL---KRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGER 174 (592)
T ss_pred EecCCccHHHHH---HhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCcccc
Confidence 999999999998 357899999999999999999999999999999988776
Q ss_pred cccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCC--CCC
Q 040814 527 TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDG--PCP 604 (664)
Q Consensus 527 ~~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~ 604 (664)
..+++|||.|+|||++.....+..+||||+||+||-|++|++||+... ..+..+..... ..|
T Consensus 175 k~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~----------------vkety~~Ik~~~Y~~P 238 (592)
T KOG0575|consen 175 KKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT----------------VKETYNKIKLNEYSMP 238 (592)
T ss_pred cceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch----------------HHHHHHHHHhcCcccc
Confidence 345789999999999999999999999999999999999999996432 23333333332 234
Q ss_pred HHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 605 ENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 605 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
........+++...|+.+|.+|||+++|+..
T Consensus 239 ~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 239 SHLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred cccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 4555667777888999999999999999853
No 6
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.98 E-value=3.5e-32 Score=275.71 Aligned_cols=156 Identities=24% Similarity=0.438 Sum_probs=140.9
Q ss_pred hcCccccceeccCCCcCEEEEEEcC-CcEEEEEeccc------------------------ceEEEEeEeecCCeeEEEE
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG------------------------RTIRLMGCSLHGAERILVY 472 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~------------------------~~v~l~g~~~~~~~~~lV~ 472 (664)
.++|...+.||+|+|++||+|+++. +..||||.+.+ ++|++++++..++..+|||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 4578888899999999999999855 89999998843 4799999999999999999
Q ss_pred eccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc--------------------------
Q 040814 473 EFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN-------------------------- 526 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n-------------------------- 526 (664)
|||.+|+|.+||+ +++.+++.....++.|||.||++||+++++|+|+||.|
T Consensus 89 EyC~gGDLs~yi~---~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L 165 (429)
T KOG0595|consen 89 EYCNGGDLSDYIR---RRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL 165 (429)
T ss_pred EeCCCCCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence 9999999999994 45689999999999999999999999999999999988
Q ss_pred -----cccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCC
Q 040814 527 -----TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEE 576 (664)
Q Consensus 527 -----~~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~ 576 (664)
..+.+|++-|||||+++.++|+.|+|+||.|+|||||++|+.||+.....
T Consensus 166 ~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~ 220 (429)
T KOG0595|consen 166 QPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPK 220 (429)
T ss_pred CchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHH
Confidence 12357999999999999999999999999999999999999999754433
No 7
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.98 E-value=2.3e-31 Score=321.18 Aligned_cols=217 Identities=23% Similarity=0.434 Sum_probs=176.1
Q ss_pred cCccccceeccCCCcCEEEEEE-cCCcEEEEEecc------------------cceEEEEeEeecCCeeEEEEeccCCCc
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKL-LDGQVIAVKRLS------------------GRTIRLMGCSLHGAERILVYEFMPNKS 479 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~------------------~~~v~l~g~~~~~~~~~lV~Ey~~~gs 479 (664)
..|...+.||+|+||.||+|+. .+++.||||+++ +++|+++|+|.+++..++|||||++|+
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~ 769 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKN 769 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCc
Confidence 4577788999999999999997 468999999873 358999999999999999999999999
Q ss_pred hhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhh---hcCccccccccccc---------------------ccccccCC
Q 040814 480 LDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLH---KYSRLRMNESKVNT---------------------NRVVGTYG 535 (664)
Q Consensus 480 L~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH---~~~~~h~d~~~~n~---------------------~~~~Gt~~ 535 (664)
|.+++. .++|.++.+|+.|||+||+||| +.+++|+|+++.|. ....||+.
T Consensus 770 L~~~l~------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 843 (968)
T PLN00113 770 LSEVLR------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLRLSLPGLLCTDTKCFISSA 843 (968)
T ss_pred HHHHHh------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEEeccccccccCCCcccccc
Confidence 999993 3899999999999999999999 66899999998761 11245689
Q ss_pred ccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCC--CchhhhhhHHhcCChhHhhhhhhCC--CCCHHHHHHH
Q 040814 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEE--RPLNLVGYLWKEGKASELMEAALDG--PCPENELLRC 611 (664)
Q Consensus 536 Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~~l 611 (664)
|||||++.+..++.|+|||||||++|||+||+.|++..... ....+..+..........+|+.+.. ..+.++..++
T Consensus 844 y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (968)
T PLN00113 844 YVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEV 923 (968)
T ss_pred ccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHH
Confidence 99999999999999999999999999999999998543221 1111222222233344455555533 3455677889
Q ss_pred HHHHHhcccccCCCCCCHHHHHHHHhcccc
Q 040814 612 IHAGLLCVHDQAVNRPTMADVVSCLRQNNQ 641 (664)
Q Consensus 612 ~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~ 641 (664)
.+++.+||+.||++||||+||+++|+++..
T Consensus 924 ~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 924 MNLALHCTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred HHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence 999999999999999999999999998864
No 8
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=3.7e-32 Score=298.74 Aligned_cols=210 Identities=28% Similarity=0.432 Sum_probs=173.2
Q ss_pred cCccccceeccCCCcCEEEEEEc------CCcEEEEEeccc-----------------------ceEEEEeEeecCCeeE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL------DGQVIAVKRLSG-----------------------RTIRLMGCSLHGAERI 469 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~ 469 (664)
.+....+.||+|.||+||+|+.. +...||||.++. ++|+|+|.|.+++..+
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~ 565 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLC 565 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeE
Confidence 34455789999999999999853 356899999853 4899999999999999
Q ss_pred EEEeccCCCchhHHhhccc-------c----cCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc----------
Q 040814 470 LVYEFMPNKSLDFFIFDSV-------K----KKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN---------- 528 (664)
Q Consensus 470 lV~Ey~~~gsL~~~l~~~~-------~----~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~---------- 528 (664)
||+|||..|||.+||.-.. . ..+|+..+.+.||.|||.||+||-++..+|+|+...|.-
T Consensus 566 MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIs 645 (774)
T KOG1026|consen 566 MVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKIS 645 (774)
T ss_pred EEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEEec
Confidence 9999999999999995321 1 224899999999999999999999999999998877720
Q ss_pred ------------------cccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcC
Q 040814 529 ------------------RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEG 589 (664)
Q Consensus 529 ------------------~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 589 (664)
+..-..+|||||.++.++||++||||||||+|||+++ |+.|+.....++..
T Consensus 646 DfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVI---------- 715 (774)
T KOG1026|consen 646 DFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVI---------- 715 (774)
T ss_pred ccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHH----------
Confidence 1122468999999999999999999999999999999 99998765544332
Q ss_pred ChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhcccc
Q 040814 590 KASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQ 641 (664)
Q Consensus 590 ~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~ 641 (664)
+.+...---++|..++.++.++|+.||+.+|.+||+++||-.+|+....
T Consensus 716 ---e~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~ 764 (774)
T KOG1026|consen 716 ---ECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQ 764 (774)
T ss_pred ---HHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHh
Confidence 2222222246788899999999999999999999999999999988663
No 9
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.97 E-value=2.8e-32 Score=283.89 Aligned_cols=214 Identities=26% Similarity=0.382 Sum_probs=178.6
Q ss_pred cccccccHHHHHHHhcCccccceeccCCCcCEEEEEEcCCcEEEEEecc---------------cceEEEEeEeecCCee
Q 040814 404 HELKGFNFQTIAAATNNFSTTNKLGEGGFGPVYKGKLLDGQVIAVKRLS---------------GRTIRLMGCSLHGAER 468 (664)
Q Consensus 404 ~~~~~~~~~~i~~~t~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~---------------~~~v~l~g~~~~~~~~ 468 (664)
.++-...|++|.. .+-||.|+.|.||+|++ .++.||||+++ +|||.+.|.|.+..-+
T Consensus 116 ~e~WeiPFe~IsE-------LeWlGSGaQGAVF~Grl-~netVAVKKV~elkETdIKHLRkLkH~NII~FkGVCtqsPcy 187 (904)
T KOG4721|consen 116 EELWEIPFEEISE-------LEWLGSGAQGAVFLGRL-HNETVAVKKVRELKETDIKHLRKLKHPNIITFKGVCTQSPCY 187 (904)
T ss_pred hhhccCCHHHhhh-------hhhhccCcccceeeeec-cCceehhHHHhhhhhhhHHHHHhccCcceeeEeeeecCCcee
Confidence 3455566777654 47899999999999999 57889999884 4689999999999999
Q ss_pred EEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc---------------------
Q 040814 469 ILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------- 527 (664)
Q Consensus 469 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------- 527 (664)
+||||||..|-|...| +.+..++-.....+..+||.||.|||.+.++|+|++..|.
T Consensus 188 CIiMEfCa~GqL~~VL---ka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~ 264 (904)
T KOG4721|consen 188 CIIMEFCAQGQLYEVL---KAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSD 264 (904)
T ss_pred EEeeeccccccHHHHH---hccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhh
Confidence 9999999999999999 3467888899999999999999999999999999998771
Q ss_pred ----ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCC
Q 040814 528 ----NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPC 603 (664)
Q Consensus 528 ----~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 603 (664)
-.+.||..|||||++++.+.++|+||||||||||||+||..|+...+....+ |.-+ ...+.-+.
T Consensus 265 ~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAII------wGVG------sNsL~Lpv 332 (904)
T KOG4721|consen 265 KSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAII------WGVG------SNSLHLPV 332 (904)
T ss_pred hhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeE------Eecc------CCcccccC
Confidence 1256999999999999999999999999999999999999998654433221 2211 22334456
Q ss_pred CHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhccc
Q 040814 604 PENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNN 640 (664)
Q Consensus 604 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 640 (664)
|..++.-+.-++.+||+..|.+||++.+|+..|+-..
T Consensus 333 PstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~ 369 (904)
T KOG4721|consen 333 PSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIAS 369 (904)
T ss_pred cccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcC
Confidence 7777778888889999999999999999999886544
No 10
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=1.2e-31 Score=271.34 Aligned_cols=199 Identities=20% Similarity=0.246 Sum_probs=166.3
Q ss_pred hcCccccceeccCCCcCEEEEEE-cCCcEEEEEecccc-----------------------------eEEEEeEeecCCe
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKL-LDGQVIAVKRLSGR-----------------------------TIRLMGCSLHGAE 467 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~-----------------------------~v~l~g~~~~~~~ 467 (664)
.+.|.+.+.||+|+||.|-+|.. ++|+.||||+++++ +|++.+++...+.
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 45678889999999999999986 45999999998642 7999999999999
Q ss_pred eEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc---------------------
Q 040814 468 RILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN--------------------- 526 (664)
Q Consensus 468 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n--------------------- 526 (664)
.|||||||++|+|.+++- ..+.+.+..-..+++|++.|+.|||+.|+.|+|++|+|
T Consensus 251 ~YmVlE~v~GGeLfd~vv---~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK 327 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVV---ANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAK 327 (475)
T ss_pred eEEEEEEecCccHHHHHH---hccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhh
Confidence 999999999999999994 45778888889999999999999999999999999998
Q ss_pred -------cccccccCCccchhhhccCC---CCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhh
Q 040814 527 -------TNRVVGTYGYMAPEYAMNGI---VSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELME 596 (664)
Q Consensus 527 -------~~~~~Gt~~Y~APE~~~~~~---~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d 596 (664)
..+.+||+.|.|||++.+.. +..|+|+||+||+||-+++|.+||....... .+.+
T Consensus 328 ~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~---------------sl~e 392 (475)
T KOG0615|consen 328 VSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP---------------SLKE 392 (475)
T ss_pred ccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc---------------cHHH
Confidence 35578999999999998654 3458899999999999999999997543222 1222
Q ss_pred hhhCCCC------CHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 597 AALDGPC------PENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 597 ~~~~~~~------~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
....+.+ ..+..++..+++.++|..||++|||++|+++
T Consensus 393 QI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 393 QILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred HHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 2333322 2345677888999999999999999999974
No 11
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.97 E-value=1.4e-31 Score=288.43 Aligned_cols=215 Identities=24% Similarity=0.348 Sum_probs=179.4
Q ss_pred CccccceeccCCCcCEEEEEEcC----CcEEEEEecc-----------------------cceEEEEeEeecCCeeEEEE
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLLD----GQVIAVKRLS-----------------------GRTIRLMGCSLHGAERILVY 472 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~~----~~~vavK~~~-----------------------~~~v~l~g~~~~~~~~~lV~ 472 (664)
...+.+.||.|.||.|++|+++- ...||||.++ +|+++|.|........+||.
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiT 709 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIIT 709 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEh
Confidence 34567899999999999999853 4689999884 46899999999999999999
Q ss_pred eccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc---------------c--------c
Q 040814 473 EFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT---------------N--------R 529 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~---------------~--------~ 529 (664)
|||+||+|+.||.. +.+.+++-+...++++||.||.||.+.+.+|+|+...|. . .
T Consensus 710 EyMENGsLDsFLR~--~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~ 787 (996)
T KOG0196|consen 710 EYMENGSLDSFLRQ--NDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA 787 (996)
T ss_pred hhhhCCcHHHHHhh--cCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecccCCCc
Confidence 99999999999965 346799999999999999999999999999998766551 0 0
Q ss_pred ----c--cccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCC
Q 040814 530 ----V--VGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGP 602 (664)
Q Consensus 530 ----~--~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 602 (664)
. .-..+|.|||.+...++|.+||||||||+|||.++ |.+|+-.... .+....++...+-+
T Consensus 788 ~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN-------------QdVIkaIe~gyRLP 854 (996)
T KOG0196|consen 788 AYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN-------------QDVIKAIEQGYRLP 854 (996)
T ss_pred cccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccch-------------HHHHHHHHhccCCC
Confidence 0 01257999999999999999999999999999988 9999754332 23334455556667
Q ss_pred CCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhcccccccccccC
Q 040814 603 CPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQHFSSVLLL 649 (664)
Q Consensus 603 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~~~~~ 649 (664)
-|.+++..+.++|+.|||+|-.+||++.||+.+|+++.....+.+..
T Consensus 855 pPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~SLk~~ 901 (996)
T KOG0196|consen 855 PPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNSLKTI 901 (996)
T ss_pred CCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchhhccc
Confidence 78899999999999999999999999999999999987665554443
No 12
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-30 Score=262.54 Aligned_cols=191 Identities=21% Similarity=0.324 Sum_probs=162.4
Q ss_pred hcCccccceeccCCCcCEEEEEEcC-CcEEEEEecccc-------------------------eEEEEeEeecCCeeEEE
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSGR-------------------------TIRLMGCSLHGAERILV 471 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~~-------------------------~v~l~g~~~~~~~~~lV 471 (664)
.++|++.+.||+|+||+||.++.++ ++.+|+|++++. +|++.-.+++++.++||
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 4688999999999999999999865 999999999763 68999999999999999
Q ss_pred EeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc-------------------------
Q 040814 472 YEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN------------------------- 526 (664)
Q Consensus 472 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n------------------------- 526 (664)
+||+.||.|..+| .+.+.+++..+.-++.+|+.||.|||+.+++|+|.+|+|
T Consensus 104 ld~~~GGeLf~hL---~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~ 180 (357)
T KOG0598|consen 104 LDYLNGGELFYHL---QREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGD 180 (357)
T ss_pred EeccCCccHHHHH---HhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCCC
Confidence 9999999999999 356789999999999999999999999999999999998
Q ss_pred -cccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCC---
Q 040814 527 -TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGP--- 602 (664)
Q Consensus 527 -~~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~--- 602 (664)
+..++||+.|||||++.+..|+..+|.||+||++|||++|.+||...+ ..++.+..+...
T Consensus 181 ~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~----------------~~~~~~~I~~~k~~~ 244 (357)
T KOG0598|consen 181 ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAED----------------VKKMYDKILKGKLPL 244 (357)
T ss_pred ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCcc----------------HHHHHHHHhcCcCCC
Confidence 455799999999999999999999999999999999999999986433 223333333332
Q ss_pred CCHHHHHHHHHHHHhcccccCCCCC
Q 040814 603 CPENELLRCIHAGLLCVHDQAVNRP 627 (664)
Q Consensus 603 ~~~~~~~~l~~l~~~Cl~~dP~~RP 627 (664)
.+.-...+..+++...++.||++|.
T Consensus 245 ~p~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 245 PPGYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred CCccCCHHHHHHHHHHhccCHHHhc
Confidence 1222344566677778999999996
No 13
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.97 E-value=2.5e-30 Score=274.96 Aligned_cols=212 Identities=24% Similarity=0.334 Sum_probs=163.8
Q ss_pred HhcCccccceeccCCCcCEEEEEE------cCCcEEEEEecc------------------------cceEEEEeEeecC-
Q 040814 417 ATNNFSTTNKLGEGGFGPVYKGKL------LDGQVIAVKRLS------------------------GRTIRLMGCSLHG- 465 (664)
Q Consensus 417 ~t~~~~~~~~lg~G~fg~Vy~~~~------~~~~~vavK~~~------------------------~~~v~l~g~~~~~- 465 (664)
..++|++.++||+|+||.||+|.. .+++.||||++. +++++++++|...
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 456889999999999999999974 225689999874 2368899988764
Q ss_pred CeeEEEEeccCCCchhHHhhcccc--------------------------------------------------------
Q 040814 466 AERILVYEFMPNKSLDFFIFDSVK-------------------------------------------------------- 489 (664)
Q Consensus 466 ~~~~lV~Ey~~~gsL~~~l~~~~~-------------------------------------------------------- 489 (664)
...++||||+++|+|.+++.....
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 457899999999999999964211
Q ss_pred ---cCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc----------------------------ccccccCCccc
Q 040814 490 ---KKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT----------------------------NRVVGTYGYMA 538 (664)
Q Consensus 490 ---~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~----------------------------~~~~Gt~~Y~A 538 (664)
...+++..+..++.||++||.|||+.+++|+|+++.|. ....++..|||
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~a 244 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMA 244 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccC
Confidence 13588899999999999999999999999999999871 01123467999
Q ss_pred hhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHHHHHHh
Q 040814 539 PEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRCIHAGLL 617 (664)
Q Consensus 539 PE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~ 617 (664)
||++.+..++.++|||||||+||||++ |+.||......+.. .. ....+. ....+......+.+++.+
T Consensus 245 PE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~--~~-~~~~~~---------~~~~~~~~~~~l~~li~~ 312 (338)
T cd05102 245 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEF--CQ-RLKDGT---------RMRAPENATPEIYRIMLA 312 (338)
T ss_pred cHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHH--HH-HHhcCC---------CCCCCCCCCHHHHHHHHH
Confidence 999999999999999999999999997 99998653322111 10 011111 111223344567889999
Q ss_pred cccccCCCCCCHHHHHHHHhccc
Q 040814 618 CVHDQAVNRPTMADVVSCLRQNN 640 (664)
Q Consensus 618 Cl~~dP~~RPt~~evl~~L~~~~ 640 (664)
||+.||++|||+.||+++|+.+.
T Consensus 313 cl~~dp~~RPs~~el~~~l~~~~ 335 (338)
T cd05102 313 CWQGDPKERPTFSALVEILGDLL 335 (338)
T ss_pred HccCChhhCcCHHHHHHHHHHHH
Confidence 99999999999999999999865
No 14
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=2.3e-31 Score=256.83 Aligned_cols=204 Identities=22% Similarity=0.312 Sum_probs=163.0
Q ss_pred cCccccceeccCCCcCEEEEEE-cCCcEEEEEecc------------------------cceEEEEe-EeecCCe-eEEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKL-LDGQVIAVKRLS------------------------GRTIRLMG-CSLHGAE-RILV 471 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~------------------------~~~v~l~g-~~~~~~~-~~lV 471 (664)
.+|++.++||+|.||+|||+.. .+|+.||.|.++ +|+|+.++ .+.++++ ..||
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 3577889999999999999984 679999999884 34677776 3444555 7899
Q ss_pred EeccCCCchhHHhhcccc-cCCCCHHHHHHHHHHHHHHHHHhhh--cC--cccccccccc--------------------
Q 040814 472 YEFMPNKSLDFFIFDSVK-KKQLNWSKRITIIEGIAQGLIYLHK--YS--RLRMNESKVN-------------------- 526 (664)
Q Consensus 472 ~Ey~~~gsL~~~l~~~~~-~~~l~~~~~~~I~~~ia~gL~yLH~--~~--~~h~d~~~~n-------------------- 526 (664)
||||..|+|...|...++ ++.+++..+++++.|+++||..+|. .. ++|+|++|.|
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l 178 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL 178 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence 999999999999965433 5679999999999999999999998 44 8999999998
Q ss_pred ------cccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhC
Q 040814 527 ------TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALD 600 (664)
Q Consensus 527 ------~~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 600 (664)
....+|||.||+||.+.+..|+.||||||+||++|||+.-++||.+.+ ..++..++-+
T Consensus 179 ~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n----------------~~~L~~KI~q 242 (375)
T KOG0591|consen 179 SSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDN----------------LLSLCKKIEQ 242 (375)
T ss_pred cchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccccc----------------HHHHHHHHHc
Confidence 244689999999999999999999999999999999999999997541 2233333333
Q ss_pred CCC---C-HHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhc
Q 040814 601 GPC---P-ENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQ 638 (664)
Q Consensus 601 ~~~---~-~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 638 (664)
+++ | ......+..++-.|+..||+.||+.-.++..+..
T Consensus 243 gd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 243 GDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred CCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 333 3 3455566677777999999999986555555443
No 15
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.97 E-value=8.3e-30 Score=266.36 Aligned_cols=206 Identities=18% Similarity=0.246 Sum_probs=167.7
Q ss_pred HHHhcCccccceeccCCCcCEEEEEEcC-CcEEEEEecccc-------------------------eEEEEeEeecCCee
Q 040814 415 AAATNNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSGR-------------------------TIRLMGCSLHGAER 468 (664)
Q Consensus 415 ~~~t~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~~-------------------------~v~l~g~~~~~~~~ 468 (664)
+...++|+.++.||+|+||.||+++.++ |+.+|+|++++. +|+|+-.+.+.+.+
T Consensus 137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~L 216 (550)
T KOG0605|consen 137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYL 216 (550)
T ss_pred cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCee
Confidence 3456899999999999999999999866 999999999762 69999999999999
Q ss_pred EEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc----------------------
Q 040814 469 ILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN---------------------- 526 (664)
Q Consensus 469 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n---------------------- 526 (664)
||||||+|||++..+| .+...|++.....++.+++.|+.-||+.|.+|+|++|.|
T Consensus 217 YLiMEylPGGD~mTLL---~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~ 293 (550)
T KOG0605|consen 217 YLIMEYLPGGDMMTLL---MRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDK 293 (550)
T ss_pred EEEEEecCCccHHHHH---HhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhh
Confidence 9999999999999999 456899999999999999999999999999999999988
Q ss_pred ---------------------------------------------------cccccccCCccchhhhccCCCCccchHHH
Q 040814 527 ---------------------------------------------------TNRVVGTYGYMAPEYAMNGIVSMKADVFS 555 (664)
Q Consensus 527 ---------------------------------------------------~~~~~Gt~~Y~APE~~~~~~~s~ksDVyS 555 (664)
....+|||.|||||++.+..|+..+|.||
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWS 373 (550)
T KOG0605|consen 294 KHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWS 373 (550)
T ss_pred hhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHH
Confidence 12246999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCC---HHHH
Q 040814 556 FGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPT---MADV 632 (664)
Q Consensus 556 fGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt---~~ev 632 (664)
+|||+|||+.|.+||......+...-+.. |. ..+..+.......+..+++.+|+. ||++|.- ++||
T Consensus 374 LG~ImyEmLvGyPPF~s~tp~~T~rkI~n-wr---------~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EI 442 (550)
T KOG0605|consen 374 LGCIMYEMLVGYPPFCSETPQETYRKIVN-WR---------ETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEI 442 (550)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHH-Hh---------hhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHH
Confidence 99999999999999976655443321110 00 111112222233567777888888 9999975 5555
Q ss_pred HH
Q 040814 633 VS 634 (664)
Q Consensus 633 l~ 634 (664)
-+
T Consensus 443 K~ 444 (550)
T KOG0605|consen 443 KK 444 (550)
T ss_pred hc
Confidence 43
No 16
>PHA02988 hypothetical protein; Provisional
Probab=99.97 E-value=1.7e-29 Score=261.89 Aligned_cols=215 Identities=18% Similarity=0.291 Sum_probs=166.5
Q ss_pred ccccccHHHHHHHhcCccccceeccCCCcCEEEEEEcCCcEEEEEeccc-------------------------ceEEEE
Q 040814 405 ELKGFNFQTIAAATNNFSTTNKLGEGGFGPVYKGKLLDGQVIAVKRLSG-------------------------RTIRLM 459 (664)
Q Consensus 405 ~~~~~~~~~i~~~t~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~-------------------------~~v~l~ 459 (664)
.++.++.+++. ......||+|+++.||+|.+ +|+.||||+++. ++++++
T Consensus 11 ~~~~i~~~~i~-----~~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~ 84 (283)
T PHA02988 11 DIKCIESDDID-----KYTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIY 84 (283)
T ss_pred cceecCHHHcC-----CCCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 34445555552 22236899999999999998 789999998852 368999
Q ss_pred eEeec----CCeeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhc-Cccccccccccc-------
Q 040814 460 GCSLH----GAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKY-SRLRMNESKVNT------- 527 (664)
Q Consensus 460 g~~~~----~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~-~~~h~d~~~~n~------- 527 (664)
|++.+ ....++||||+++|+|.+++. +...+++..+.+++.|++.||.|||+. +.+|+|+++.|.
T Consensus 85 g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~---~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~ 161 (283)
T PHA02988 85 GFIIDIVDDLPRLSLILEYCTRGYLREVLD---KEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYK 161 (283)
T ss_pred eeEEecccCCCceEEEEEeCCCCcHHHHHh---hCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCc
Confidence 99876 346789999999999999994 345799999999999999999999984 888999998771
Q ss_pred ----------------ccccccCCccchhhhcc--CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcC
Q 040814 528 ----------------NRVVGTYGYMAPEYAMN--GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEG 589 (664)
Q Consensus 528 ----------------~~~~Gt~~Y~APE~~~~--~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 589 (664)
....|+..|+|||++.+ ..++.++|||||||++|||++|+.||......+ .....
T Consensus 162 ~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~---~~~~i---- 234 (283)
T PHA02988 162 LKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKE---IYDLI---- 234 (283)
T ss_pred EEEcccchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHH---HHHHH----
Confidence 12357889999999976 689999999999999999999999996433211 11111
Q ss_pred ChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhccc
Q 040814 590 KASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNN 640 (664)
Q Consensus 590 ~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 640 (664)
.........+......+.+++.+||+.||++|||++|+++.|++..
T Consensus 235 -----~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 235 -----INKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred -----HhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 1111112223334556888889999999999999999999998765
No 17
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=99.96 E-value=6.2e-30 Score=266.99 Aligned_cols=226 Identities=19% Similarity=0.226 Sum_probs=180.6
Q ss_pred HHHhcCccccceeccCCCcCEEEEEEcC-CcEEEEEecccc--------------------------eEEEEeEeecCCe
Q 040814 415 AAATNNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSGR--------------------------TIRLMGCSLHGAE 467 (664)
Q Consensus 415 ~~~t~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~~--------------------------~v~l~g~~~~~~~ 467 (664)
....++|...+.||+|+|++||+|+.++ ++.+|||++.+. +++|+--+.++..
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 3445688899999999999999999755 999999999752 6899999999999
Q ss_pred eEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc---------------------
Q 040814 468 RILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN--------------------- 526 (664)
Q Consensus 468 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n--------------------- 526 (664)
+|+|+||++||+|.++|. +.+.|++.....++.+|+.||+|||+.|++|+|++|+|
T Consensus 149 LYFvLe~A~nGdll~~i~---K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~ 225 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIK---KYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILS 225 (604)
T ss_pred eEEEEEecCCCcHHHHHH---HhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCC
Confidence 999999999999999994 56899999999999999999999999999999999998
Q ss_pred ------------------cccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhc
Q 040814 527 ------------------TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKE 588 (664)
Q Consensus 527 ------------------~~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~ 588 (664)
...++||..|.+||++.++..+..+|+|+||||||+|+.|++||...++...++
T Consensus 226 ~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFq-------- 297 (604)
T KOG0592|consen 226 PSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQ-------- 297 (604)
T ss_pred hhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHH--------
Confidence 134789999999999999999999999999999999999999997654332221
Q ss_pred CChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhcccccccccccCCCCCCCcc
Q 040814 589 GKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQHFSSVLLLRSSKVPRI 657 (664)
Q Consensus 589 ~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~~~~~~~p~~p~~ 657 (664)
.+++ +.-.+++...+.+.+++.+.|..||.+|+|.+||-+..=-....+.+.....+|+.-+|
T Consensus 298 ----kI~~--l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw~nlw~~~PP~l~py 360 (604)
T KOG0592|consen 298 ----KIQA--LDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDWENLWQQTPPKLQPY 360 (604)
T ss_pred ----HHHH--hcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhCcccccCChhhhhhcCCCcccCC
Confidence 1111 11233444445666777778999999999998887653222223445555555554333
No 18
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.96 E-value=4.2e-30 Score=271.31 Aligned_cols=216 Identities=20% Similarity=0.322 Sum_probs=168.9
Q ss_pred HHHHHHhcCccccceeccCCCcCEEEEEEcCCcEEEEEeccc------------------------ceEEEEeEeecCCe
Q 040814 412 QTIAAATNNFSTTNKLGEGGFGPVYKGKLLDGQVIAVKRLSG------------------------RTIRLMGCSLHGAE 467 (664)
Q Consensus 412 ~~i~~~t~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~------------------------~~v~l~g~~~~~~~ 467 (664)
++..+..+.+.+...||+|.||+||+|++. ..||||+++- |++-++|+|.....
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~ 462 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL 462 (678)
T ss_pred cccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce
Confidence 444445555667799999999999999983 3699999852 47889999998877
Q ss_pred eEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------
Q 040814 468 RILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-------------------- 527 (664)
Q Consensus 468 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-------------------- 527 (664)
.||..+|++-+|..+||.. +..|+..+.+.||+|||+||.|||.++++|+|++..|.
T Consensus 463 -AIiTqwCeGsSLY~hlHv~--etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~ 539 (678)
T KOG0193|consen 463 -AIITQWCEGSSLYTHLHVQ--ETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKT 539 (678)
T ss_pred -eeeehhccCchhhhhccch--hhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeee
Confidence 9999999999999999753 47899999999999999999999999999999998871
Q ss_pred --------ccccccCCccchhhhcc---CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhh
Q 040814 528 --------NRVVGTYGYMAPEYAMN---GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELME 596 (664)
Q Consensus 528 --------~~~~Gt~~Y~APE~~~~---~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d 596 (664)
....|...|||||+++. .+|+..+||||||+|+|||+||..||.....++.+ |.-++-.-..|
T Consensus 540 ~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIi------fmVGrG~l~pd 613 (678)
T KOG0193|consen 540 RWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQII------FMVGRGYLMPD 613 (678)
T ss_pred eeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheE------EEecccccCcc
Confidence 11235567999999974 56999999999999999999999999744333332 11122111111
Q ss_pred hhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhcccc
Q 040814 597 AALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQ 641 (664)
Q Consensus 597 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~ 641 (664)
.. .....+..++.+++..||..++++||.+.+|+.+|+.+..
T Consensus 614 ~s---~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 614 LS---KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred ch---hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 11 1123455667788888999999999999999999888763
No 19
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.96 E-value=2.4e-29 Score=258.07 Aligned_cols=206 Identities=24% Similarity=0.350 Sum_probs=164.3
Q ss_pred cCccccceeccCCCcCEEEEEEc----CCcEEEEEeccc-----------------------ceEEEEeEeecCCeeEEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL----DGQVIAVKRLSG-----------------------RTIRLMGCSLHGAERILV 471 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~----~~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV 471 (664)
++|++.+.||+|+||.||+|.++ .+..||+|.++. +++++++++..++..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 56888899999999999999863 367899998753 368999999999999999
Q ss_pred EeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc------------------------
Q 040814 472 YEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------------ 527 (664)
Q Consensus 472 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------------ 527 (664)
|||+++|+|.+++... ...+++..++.++.||+.||+|||+.+.+|+|+++.|.
T Consensus 85 ~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~ 162 (266)
T cd05064 85 TEYMSNGALDSFLRKH--EGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAI 162 (266)
T ss_pred EEeCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccccch
Confidence 9999999999999532 35789999999999999999999999999999998771
Q ss_pred ---ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCC
Q 040814 528 ---NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPC 603 (664)
Q Consensus 528 ---~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 603 (664)
....++..|+|||.+.+..++.++|||||||++||+++ |+.||......+. +.. +......+.
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~---~~~----------~~~~~~~~~ 229 (266)
T cd05064 163 YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDV---IKA----------VEDGFRLPA 229 (266)
T ss_pred hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHH---HHH----------HHCCCCCCC
Confidence 00123467999999999999999999999999999875 9999864432211 110 111111122
Q ss_pred CHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhcc
Q 040814 604 PENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQN 639 (664)
Q Consensus 604 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 639 (664)
+......+.+++..||+.+|++||+++||++.|+..
T Consensus 230 ~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 230 PRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred CCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 334556688889999999999999999999998764
No 20
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=9.9e-31 Score=267.06 Aligned_cols=200 Identities=23% Similarity=0.331 Sum_probs=163.5
Q ss_pred CccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-----------------------ceEEEEeEeecCCeeEEEEecc
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-----------------------RTIRLMGCSLHGAERILVYEFM 475 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV~Ey~ 475 (664)
.|...+.||+|.||.||+|... .++.||+|++.- ++.+.+|.+..+..++++||||
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~ 93 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC 93 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence 4566689999999999999974 489999999852 1357889999999999999999
Q ss_pred CCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc--------------------------ccc
Q 040814 476 PNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN--------------------------TNR 529 (664)
Q Consensus 476 ~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n--------------------------~~~ 529 (664)
.+|++.+.| .....+++..+.-|++++..||.|||.++.+|+|++..| ...
T Consensus 94 ~gGsv~~lL---~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~t 170 (467)
T KOG0201|consen 94 GGGSVLDLL---KSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKT 170 (467)
T ss_pred cCcchhhhh---ccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhcccc
Confidence 999999998 344556899999999999999999999999999999887 355
Q ss_pred ccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHH
Q 040814 530 VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELL 609 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 609 (664)
++||+.|||||++.+..|+.|+||||+|++.+||.+|.+|+...+....+.++ .+ -..+.+.+ ....
T Consensus 171 fvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflI----pk-----~~PP~L~~----~~S~ 237 (467)
T KOG0201|consen 171 FVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLI----PK-----SAPPRLDG----DFSP 237 (467)
T ss_pred ccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEec----cC-----CCCCcccc----ccCH
Confidence 78999999999999889999999999999999999999998776654433222 11 11122222 2334
Q ss_pred HHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 610 RCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 610 ~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
.+.+++..|++++|+.||++.++++.
T Consensus 238 ~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 238 PFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred HHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 46666777999999999999999853
No 21
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.7e-29 Score=287.41 Aligned_cols=208 Identities=26% Similarity=0.384 Sum_probs=168.8
Q ss_pred CccccceeccCCCcCEEEEEEcC--Cc----EEEEEecc-----------------------cceEEEEeEeecCCeeEE
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLLD--GQ----VIAVKRLS-----------------------GRTIRLMGCSLHGAERIL 470 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~~--~~----~vavK~~~-----------------------~~~v~l~g~~~~~~~~~l 470 (664)
+.+..+.||+|.||.||.|...+ +. .||||.+. +|+|+++|.|......+|
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i 772 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLI 772 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEE
Confidence 34557899999999999999754 43 48999884 358999999999999999
Q ss_pred EEeccCCCchhHHhhcccc----cCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-------------------
Q 040814 471 VYEFMPNKSLDFFIFDSVK----KKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------- 527 (664)
Q Consensus 471 V~Ey~~~gsL~~~l~~~~~----~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------- 527 (664)
++|||++|+|..||.+.+. ...|+..+.+.|+.|||+|+.||+++..+|+|+...|.
T Consensus 773 ~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDi 852 (1025)
T KOG1095|consen 773 LLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLARDI 852 (1025)
T ss_pred EehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchhHhh
Confidence 9999999999999976422 35789999999999999999999999999999887771
Q ss_pred ---------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhh
Q 040814 528 ---------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEA 597 (664)
Q Consensus 528 ---------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 597 (664)
....-...|||||.++.+.||.|+|||||||+||||+| |..||...+..+.+. +....+
T Consensus 853 y~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~---~~~~gg-------- 921 (1025)
T KOG1095|consen 853 YDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLL---DVLEGG-------- 921 (1025)
T ss_pred hhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHH---HHHhCC--------
Confidence 00112357999999999999999999999999999999 888876544332221 111111
Q ss_pred hhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhccc
Q 040814 598 ALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNN 640 (664)
Q Consensus 598 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 640 (664)
+-+.|..++..+.+++..||+.+|++||++..|++.++.+.
T Consensus 922 --RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~ 962 (1025)
T KOG1095|consen 922 --RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAIS 962 (1025)
T ss_pred --ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhh
Confidence 22446678888999999999999999999999999988765
No 22
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=3.2e-29 Score=256.02 Aligned_cols=213 Identities=23% Similarity=0.296 Sum_probs=166.3
Q ss_pred hcCccccceeccCCCcCEEEEEE-cCCcEEEEEecc-----------------------cceEEEEeEeecCCeeEEEEe
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKL-LDGQVIAVKRLS-----------------------GRTIRLMGCSLHGAERILVYE 473 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~-----------------------~~~v~l~g~~~~~~~~~lV~E 473 (664)
.++|+..+.||.|.-+.||+|+. +.++.||||++. +|+++.+..+..+.++++||.
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 46788999999999999999996 568999999984 468999999999999999999
Q ss_pred ccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc---------------------------
Q 040814 474 FMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN--------------------------- 526 (664)
Q Consensus 474 y~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n--------------------------- 526 (664)
||.+||+.+.+...-. ..+++..+..|.+++++||.|||+.|.+|+|+|..|
T Consensus 105 fMa~GS~ldIik~~~~-~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~ 183 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYP-DGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQ 183 (516)
T ss_pred hhcCCcHHHHHHHHcc-ccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccCcee
Confidence 9999999999965432 349999999999999999999999999999999877
Q ss_pred --c-ccccccCCccchhhhcc--CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCC
Q 040814 527 --T-NRVVGTYGYMAPEYAMN--GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDG 601 (664)
Q Consensus 527 --~-~~~~Gt~~Y~APE~~~~--~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 601 (664)
. +..+||+.|||||+++. ..|+.|+||||||++..||.+|..||..+.....+- . --++....+.-..+..
T Consensus 184 ~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl---~-tLqn~pp~~~t~~~~~ 259 (516)
T KOG0582|consen 184 VTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLL---L-TLQNDPPTLLTSGLDK 259 (516)
T ss_pred eEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHH---H-HhcCCCCCcccccCCh
Confidence 1 45689999999999764 459999999999999999999999998765443210 0 0111111111001111
Q ss_pred CCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 602 PCPENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
+........+.+++-.|+++||.+|||++++++.
T Consensus 260 d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 260 DEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred HHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 1111222356677777999999999999999853
No 23
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=8.6e-30 Score=268.25 Aligned_cols=202 Identities=24% Similarity=0.337 Sum_probs=164.8
Q ss_pred cCccccceeccCCCcCEEEEEE-cCCcEEEEEeccc----------------------ceEEEEeEeecCCeeEEEEecc
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKL-LDGQVIAVKRLSG----------------------RTIRLMGCSLHGAERILVYEFM 475 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~----------------------~~v~l~g~~~~~~~~~lV~Ey~ 475 (664)
..|....+||+|..|.||.++. .+++.||||++.. ++|+++..+..++++++|||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 3466678999999999999986 4588999999853 3688888888889999999999
Q ss_pred CCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc--------------------------ccc
Q 040814 476 PNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN--------------------------TNR 529 (664)
Q Consensus 476 ~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n--------------------------~~~ 529 (664)
++|+|.+.+ ....+++.++..|++++++||+|||..+++|+|++..| ...
T Consensus 353 ~ggsLTDvV----t~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~T 428 (550)
T KOG0578|consen 353 EGGSLTDVV----TKTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRST 428 (550)
T ss_pred CCCchhhhh----hcccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccCcccc
Confidence 999999988 44569999999999999999999999999999999877 345
Q ss_pred ccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHH
Q 040814 530 VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELL 609 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 609 (664)
++||+.|||||++....|.+|+||||||++++||+-|++||-....-..+ |++...... .-..+.....
T Consensus 429 mVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAl----yLIa~ng~P-------~lk~~~klS~ 497 (550)
T KOG0578|consen 429 MVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL----YLIATNGTP-------KLKNPEKLSP 497 (550)
T ss_pred ccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHH----HHHhhcCCC-------CcCCccccCH
Confidence 78999999999999999999999999999999999999998643222221 111111111 1122344556
Q ss_pred HHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 610 RCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 610 ~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
.+.++..+||+.|+++||++.|+|+.
T Consensus 498 ~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 498 ELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred HHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 67788888999999999999999863
No 24
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.96 E-value=4.5e-29 Score=269.17 Aligned_cols=210 Identities=22% Similarity=0.329 Sum_probs=162.6
Q ss_pred hcCccccceeccCCCcCEEEEEE------cCCcEEEEEecc------------------------cceEEEEeEeecCCe
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKL------LDGQVIAVKRLS------------------------GRTIRLMGCSLHGAE 467 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~------~~~~~vavK~~~------------------------~~~v~l~g~~~~~~~ 467 (664)
.++|++.+.||+|+||.||+|.. .++..||||+++ +++++++++|..++.
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 45688889999999999999973 236689999874 237899999999999
Q ss_pred eEEEEeccCCCchhHHhhcccc----------------------------------------------------------
Q 040814 468 RILVYEFMPNKSLDFFIFDSVK---------------------------------------------------------- 489 (664)
Q Consensus 468 ~~lV~Ey~~~gsL~~~l~~~~~---------------------------------------------------------- 489 (664)
.++|||||++|+|.+++.....
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 9999999999999999864211
Q ss_pred --------------cCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc----------------------------
Q 040814 490 --------------KKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT---------------------------- 527 (664)
Q Consensus 490 --------------~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~---------------------------- 527 (664)
...++|..+.+++.||++||.|||+.+++|+|+++.|.
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~ 273 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVK 273 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCccccccc
Confidence 12578999999999999999999999999999999871
Q ss_pred ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHH
Q 040814 528 NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPEN 606 (664)
Q Consensus 528 ~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 606 (664)
....++..|+|||++.+..++.++|||||||++|||++ |..||........ .. ..+........+..
T Consensus 274 ~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~--~~----------~~~~~~~~~~~~~~ 341 (375)
T cd05104 274 GNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSK--FY----------KMIKEGYRMLSPEC 341 (375)
T ss_pred CCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHH--HH----------HHHHhCccCCCCCC
Confidence 00123456999999999999999999999999999998 8888754322211 11 11111111111222
Q ss_pred HHHHHHHHHHhcccccCCCCCCHHHHHHHHhcc
Q 040814 607 ELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQN 639 (664)
Q Consensus 607 ~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 639 (664)
...++.+++.+||+.||++||++.||+++|++.
T Consensus 342 ~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 342 APSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 334677888999999999999999999999864
No 25
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.8e-29 Score=269.28 Aligned_cols=196 Identities=21% Similarity=0.285 Sum_probs=170.8
Q ss_pred HHHHhcCccccceeccCCCcCEEEEEEcC-CcEEEEEecccc--------------------------eEEEEeEeecCC
Q 040814 414 IAAATNNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSGR--------------------------TIRLMGCSLHGA 466 (664)
Q Consensus 414 i~~~t~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~~--------------------------~v~l~g~~~~~~ 466 (664)
.....++|...++||+|.||+|+++.++. ++.+|||++++. +++++.++...+
T Consensus 363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~ 442 (694)
T KOG0694|consen 363 GPLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE 442 (694)
T ss_pred CcccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCC
Confidence 34556889999999999999999999865 889999999873 578999999999
Q ss_pred eeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc--------------------
Q 040814 467 ERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN-------------------- 526 (664)
Q Consensus 467 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n-------------------- 526 (664)
+.+.||||+.||++..+. ....+++..+.-++..|+.||+|||+++++.+|+|..|
T Consensus 443 ~l~fvmey~~Ggdm~~~~----~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~ 518 (694)
T KOG0694|consen 443 HLFFVMEYVAGGDLMHHI----HTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEG 518 (694)
T ss_pred eEEEEEEecCCCcEEEEE----ecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEeccccccccc
Confidence 999999999999954433 45789999999999999999999999999999999887
Q ss_pred ------cccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhC
Q 040814 527 ------TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALD 600 (664)
Q Consensus 527 ------~~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 600 (664)
+.+++||+.|||||++.+..|+..+|.|||||+||||+.|+.||.+.+++ ++.|.++.
T Consensus 519 m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEe----------------e~FdsI~~ 582 (694)
T KOG0694|consen 519 MGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEE----------------EVFDSIVN 582 (694)
T ss_pred CCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHH----------------HHHHHHhc
Confidence 56789999999999999999999999999999999999999999765433 45555554
Q ss_pred C--CCCHHHHHHHHHHHHhcccccCCCCCCH
Q 040814 601 G--PCPENELLRCIHAGLLCVHDQAVNRPTM 629 (664)
Q Consensus 601 ~--~~~~~~~~~l~~l~~~Cl~~dP~~RPt~ 629 (664)
+ .+|.....+.+.++.+.+..+|++|.-+
T Consensus 583 d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 583 DEVRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred CCCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 4 4566777888899999999999999866
No 26
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.96 E-value=4.8e-29 Score=268.72 Aligned_cols=211 Identities=20% Similarity=0.333 Sum_probs=164.2
Q ss_pred hcCccccceeccCCCcCEEEEEEc------CCcEEEEEeccc------------------------ceEEEEeEeecCCe
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLL------DGQVIAVKRLSG------------------------RTIRLMGCSLHGAE 467 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~~~~------------------------~~v~l~g~~~~~~~ 467 (664)
.++|++.+.||+|+||.||+|... +++.||||++.. ++++++++|..+..
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~ 116 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP 116 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence 457888999999999999998742 246899998742 36899999999999
Q ss_pred eEEEEeccCCCchhHHhhcccc----------------------------------------------------------
Q 040814 468 RILVYEFMPNKSLDFFIFDSVK---------------------------------------------------------- 489 (664)
Q Consensus 468 ~~lV~Ey~~~gsL~~~l~~~~~---------------------------------------------------------- 489 (664)
.++|||||++|+|.+++.....
T Consensus 117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd05106 117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD 196 (374)
T ss_pred eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence 9999999999999999854210
Q ss_pred ---------cCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc----------------------------cccc
Q 040814 490 ---------KKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN----------------------------RVVG 532 (664)
Q Consensus 490 ---------~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~----------------------------~~~G 532 (664)
...+++..+.+|+.||++||.|||+.+++|+|+++.|.- ...+
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~ 276 (374)
T cd05106 197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARL 276 (374)
T ss_pred ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCC
Confidence 124788999999999999999999999999999988710 1123
Q ss_pred cCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHH
Q 040814 533 TYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRC 611 (664)
Q Consensus 533 t~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l 611 (664)
+..|||||++.+..++.++|||||||++|||++ |+.||......... ............+......+
T Consensus 277 ~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~l 344 (374)
T cd05106 277 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKF------------YKMVKRGYQMSRPDFAPPEI 344 (374)
T ss_pred ccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHH------------HHHHHcccCccCCCCCCHHH
Confidence 457999999998999999999999999999997 99998643322111 11111111112222234567
Q ss_pred HHHHHhcccccCCCCCCHHHHHHHHhccc
Q 040814 612 IHAGLLCVHDQAVNRPTMADVVSCLRQNN 640 (664)
Q Consensus 612 ~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 640 (664)
.+++.+||+.||++|||+.+|+++|+++.
T Consensus 345 ~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 345 YSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 88888999999999999999999998764
No 27
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.96 E-value=1.2e-28 Score=255.59 Aligned_cols=204 Identities=22% Similarity=0.256 Sum_probs=160.7
Q ss_pred CccccceeccCCCcCEEEEEE-cCCcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEEe
Q 040814 420 NFSTTNKLGEGGFGPVYKGKL-LDGQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVYE 473 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~E 473 (664)
.|+..+.||+|+||.||++.. .+++.||+|.+.+ +++++.+++.+++..++|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 367789999999999999997 4589999998742 25888899999999999999
Q ss_pred ccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-------------------------c
Q 040814 474 FMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-------------------------N 528 (664)
Q Consensus 474 y~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-------------------------~ 528 (664)
||++|+|..++... ....+++..+..++.||+.||+|||+.+++|+|+++.|. .
T Consensus 81 ~~~~g~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 159 (285)
T cd05631 81 IMNGGDLKFHIYNM-GNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVR 159 (285)
T ss_pred ecCCCcHHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeec
Confidence 99999999888542 234689999999999999999999999999999998771 1
Q ss_pred cccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHH
Q 040814 529 RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENEL 608 (664)
Q Consensus 529 ~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 608 (664)
...||..|||||++.+..++.++|||||||++|||++|+.||...........+... +. .....++....
T Consensus 160 ~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~--------~~--~~~~~~~~~~s 229 (285)
T cd05631 160 GRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRR--------VK--EDQEEYSEKFS 229 (285)
T ss_pred CCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHH--------hh--cccccCCccCC
Confidence 235789999999999999999999999999999999999999754332211111000 00 00112233334
Q ss_pred HHHHHHHHhcccccCCCCCC-----HHHHHH
Q 040814 609 LRCIHAGLLCVHDQAVNRPT-----MADVVS 634 (664)
Q Consensus 609 ~~l~~l~~~Cl~~dP~~RPt-----~~evl~ 634 (664)
..+.+++.+||+.||++||+ ++++++
T Consensus 230 ~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 230 EDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred HHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 56778888899999999997 788876
No 28
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.96 E-value=1.1e-28 Score=258.23 Aligned_cols=214 Identities=24% Similarity=0.343 Sum_probs=160.7
Q ss_pred cCccccceeccCCCcCEEEEEEcC-----------------CcEEEEEeccc-----------------------ceEEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD-----------------GQVIAVKRLSG-----------------------RTIRL 458 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~-----------------~~~vavK~~~~-----------------------~~v~l 458 (664)
++|.+.++||+|+||.||++..++ +..||+|.+.. +++++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 578888999999999999998532 34799998743 37899
Q ss_pred EeEeecCCeeEEEEeccCCCchhHHhhccc----------------ccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccc
Q 040814 459 MGCSLHGAERILVYEFMPNKSLDFFIFDSV----------------KKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNE 522 (664)
Q Consensus 459 ~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~----------------~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~ 522 (664)
++++.+.+..++||||+++|+|.+++.... ....++|..+.+|+.||+.||.|||+.+++|+|+
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dl 164 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDL 164 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCc
Confidence 999999999999999999999999985421 1135788999999999999999999999999999
Q ss_pred ccccc----------------------------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHh--CCCCCCC
Q 040814 523 SKVNT----------------------------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS--GRKNNNC 572 (664)
Q Consensus 523 ~~~n~----------------------------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt--G~~p~~~ 572 (664)
++.|. ....++..|||||++.++.++.++|||||||++|||++ +..|+..
T Consensus 165 kp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~ 244 (304)
T cd05096 165 ATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGE 244 (304)
T ss_pred chhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCc
Confidence 99881 01123668999999998899999999999999999997 4556654
Q ss_pred CCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhc
Q 040814 573 YDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQ 638 (664)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 638 (664)
....+............. .......+......+.+++.+||+.+|++|||+.||++.|++
T Consensus 245 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 245 LTDEQVIENAGEFFRDQG------RQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCHHHHHHHHHHHhhhcc------ccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 332221111100000000 000011122344568889999999999999999999999864
No 29
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.96 E-value=5e-29 Score=254.83 Aligned_cols=200 Identities=30% Similarity=0.471 Sum_probs=151.5
Q ss_pred ccceeccCCCcCEEEEEEc-----CCcEEEEEeccc-----------------------ceEEEEeEeecCCeeEEEEec
Q 040814 423 TTNKLGEGGFGPVYKGKLL-----DGQVIAVKRLSG-----------------------RTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 423 ~~~~lg~G~fg~Vy~~~~~-----~~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV~Ey 474 (664)
..+.||.|.||.||+|.+. .+..|+||.+.. ++++++|+|.+.+..++|+||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 4588999999999999986 267899999942 379999999988889999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc---------------------------
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------- 527 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------- 527 (664)
|++|+|.++|... ....+++..+..|+.||++||.|||+.+.+|.++++.|.
T Consensus 83 ~~~g~L~~~L~~~-~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~ 161 (259)
T PF07714_consen 83 CPGGSLDDYLKSK-NKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKN 161 (259)
T ss_dssp -TTEBHHHHHHHT-CTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEE
T ss_pred ccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999653 246799999999999999999999999999998777650
Q ss_pred -ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCH
Q 040814 528 -NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPE 605 (664)
Q Consensus 528 -~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 605 (664)
....+...|+|||.+.+..++.++||||||+++|||++ |+.|+......+ .... +........+.
T Consensus 162 ~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~---~~~~----------~~~~~~~~~~~ 228 (259)
T PF07714_consen 162 DSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEE---IIEK----------LKQGQRLPIPD 228 (259)
T ss_dssp STTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHH---HHHH----------HHTTEETTSBT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccc---cccc----------ccccccceecc
Confidence 11235567999999999899999999999999999999 678865432111 1111 11111122233
Q ss_pred HHHHHHHHHHHhcccccCCCCCCHHHHHHHH
Q 040814 606 NELLRCIHAGLLCVHDQAVNRPTMADVVSCL 636 (664)
Q Consensus 606 ~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L 636 (664)
.....+.+++.+||+.+|++||||.+|++.|
T Consensus 229 ~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 229 NCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp TSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred chhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 3456677889999999999999999999886
No 30
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.96 E-value=1.9e-28 Score=250.33 Aligned_cols=207 Identities=26% Similarity=0.355 Sum_probs=165.1
Q ss_pred hcCccccceeccCCCcCEEEEEEcCCcEEEEEeccc---------------------ceEEEEeEeecCCeeEEEEeccC
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLLDGQVIAVKRLSG---------------------RTIRLMGCSLHGAERILVYEFMP 476 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~---------------------~~v~l~g~~~~~~~~~lV~Ey~~ 476 (664)
.++|++.++||+|+||.||+|...+++.||+|.+.. +++++++++..++..++||||++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 84 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMA 84 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCC
Confidence 357888999999999999999988888999998753 36889999999999999999999
Q ss_pred CCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc---------------------------cc
Q 040814 477 NKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT---------------------------NR 529 (664)
Q Consensus 477 ~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~---------------------------~~ 529 (664)
+++|.+++... ....+++.++..++.|++.||.|||+.+.+|+|+++.|. ..
T Consensus 85 ~~~L~~~l~~~-~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 163 (261)
T cd05072 85 KGSLLDFLKSD-EGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREG 163 (261)
T ss_pred CCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCceeccCC
Confidence 99999998543 345789999999999999999999999999999998771 01
Q ss_pred ccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHH
Q 040814 530 VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENEL 608 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 608 (664)
..++..|+|||++.+..++.++|||||||++|||++ |+.||......... .. .... ...+......
T Consensus 164 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~---~~-~~~~---------~~~~~~~~~~ 230 (261)
T cd05072 164 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVM---SA-LQRG---------YRMPRMENCP 230 (261)
T ss_pred CccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHH---HH-HHcC---------CCCCCCCCCC
Confidence 123457999999998889999999999999999998 99998543221111 10 1111 1111112234
Q ss_pred HHHHHHHHhcccccCCCCCCHHHHHHHHhc
Q 040814 609 LRCIHAGLLCVHDQAVNRPTMADVVSCLRQ 638 (664)
Q Consensus 609 ~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 638 (664)
..+.+++.+||+.+|++||+++++.++|+.
T Consensus 231 ~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 231 DELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred HHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 567888999999999999999999999975
No 31
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.3e-29 Score=260.89 Aligned_cols=216 Identities=22% Similarity=0.255 Sum_probs=171.5
Q ss_pred HhcCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc------------------------ceEEEEeEeecCC-eeEE
Q 040814 417 ATNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG------------------------RTIRLMGCSLHGA-ERIL 470 (664)
Q Consensus 417 ~t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~------------------------~~v~l~g~~~~~~-~~~l 470 (664)
..++|...++||.|.||.||+|+.. +|+.||||++++ ++|++.+.+.+.+ .+++
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f 87 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF 87 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence 3467889999999999999999964 499999998853 4789999998888 8999
Q ss_pred EEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-----------------------
Q 040814 471 VYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT----------------------- 527 (664)
Q Consensus 471 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~----------------------- 527 (664)
|||||+. +|.+++.++ +..|++..+..|+.||++||+|+|++|..|+|.+|+|.
T Consensus 88 VfE~Md~-NLYqLmK~R--~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~Skp 164 (538)
T KOG0661|consen 88 VFEFMDC-NLYQLMKDR--NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKP 164 (538)
T ss_pred eHHhhhh-hHHHHHhhc--CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccccCC
Confidence 9999975 899998654 67999999999999999999999999999999999982
Q ss_pred --ccccccCCccchhhhc-cCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChh-----Hhhhhhh
Q 040814 528 --NRVVGTYGYMAPEYAM-NGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKAS-----ELMEAAL 599 (664)
Q Consensus 528 --~~~~Gt~~Y~APE~~~-~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~-----~~~d~~~ 599 (664)
+..+.|..|.|||++. .+.|+.+.||||+|||++||.+-++-|.+.++.+++.-+-.+....... ..+...+
T Consensus 165 PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~m 244 (538)
T KOG0661|consen 165 PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAM 244 (538)
T ss_pred CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHh
Confidence 2245788999999986 5779999999999999999999999998777665554332222211111 1111111
Q ss_pred CCCC-----------CHHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 600 DGPC-----------PENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 600 ~~~~-----------~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
.-.. -.....++++++.+|++.||.+|||++|.+++
T Consensus 245 nf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 245 NFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred ccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 1111 11356778899999999999999999999876
No 32
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=2.4e-28 Score=251.23 Aligned_cols=214 Identities=27% Similarity=0.362 Sum_probs=159.6
Q ss_pred cccceeccCCCcCEEEEEEcCCcEEEEEeccc---------------------ceEEEEeEeecCC----eeEEEEeccC
Q 040814 422 STTNKLGEGGFGPVYKGKLLDGQVIAVKRLSG---------------------RTIRLMGCSLHGA----ERILVYEFMP 476 (664)
Q Consensus 422 ~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~---------------------~~v~l~g~~~~~~----~~~lV~Ey~~ 476 (664)
+..++||+|+||.||||++ +++.||||++.. +++++++.-..+. +.+||+||.+
T Consensus 213 ~l~eli~~Grfg~V~KaqL-~~~~VAVKifp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~ 291 (534)
T KOG3653|consen 213 QLLELIGRGRFGCVWKAQL-DNRLVAVKIFPEQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHP 291 (534)
T ss_pred hhHHHhhcCccceeehhhc-cCceeEEEecCHHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeecc
Confidence 3457899999999999999 569999999953 3678888776665 8999999999
Q ss_pred CCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhh---------cCcccccccccc---------------------
Q 040814 477 NKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK---------YSRLRMNESKVN--------------------- 526 (664)
Q Consensus 477 ~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~---------~~~~h~d~~~~n--------------------- 526 (664)
+|||.+|| +...++|....+|+..+++||+|||+ .++.|+|++..|
T Consensus 292 kGsL~dyL----~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~ 367 (534)
T KOG3653|consen 292 KGSLCDYL----KANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLE 367 (534)
T ss_pred CCcHHHHH----HhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEec
Confidence 99999999 56789999999999999999999996 468899999887
Q ss_pred -------cccccccCCccchhhhccCC-CC-----ccchHHHHHHHHHHHHhCCCCCCC-CCCCCchhhhhhHHhcCChh
Q 040814 527 -------TNRVVGTYGYMAPEYAMNGI-VS-----MKADVFSFGVLLLEIVSGRKNNNC-YDEERPLNLVGYLWKEGKAS 592 (664)
Q Consensus 527 -------~~~~~Gt~~Y~APE~~~~~~-~s-----~ksDVySfGvvL~ElltG~~p~~~-~~~~~~~~~~~~~~~~~~~~ 592 (664)
....+||.+|||||++.+.. +. .+.||||+|.|||||++....++. ...+-.+.+-..+-......
T Consensus 368 p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e 447 (534)
T KOG3653|consen 368 PGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLE 447 (534)
T ss_pred CCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHH
Confidence 23357999999999997632 22 478999999999999998776542 11111111111111111222
Q ss_pred Hhh----hhhhCCCCCH-----HHHHHHHHHHHhcccccCCCCCCHHHHHHHHhccc
Q 040814 593 ELM----EAALDGPCPE-----NELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNN 640 (664)
Q Consensus 593 ~~~----d~~~~~~~~~-----~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 640 (664)
++- .+..+..++. ..+.-+.+.+..||+.||+.|.|+.-|-+++.++.
T Consensus 448 ~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~ 504 (534)
T KOG3653|consen 448 EMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELM 504 (534)
T ss_pred HHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHh
Confidence 221 2222222222 34556778888999999999999999999987765
No 33
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.96 E-value=2.3e-28 Score=249.15 Aligned_cols=204 Identities=23% Similarity=0.337 Sum_probs=162.0
Q ss_pred cCccccceeccCCCcCEEEEEEcCCcEEEEEeccc---------------------ceEEEEeEeecCCeeEEEEeccCC
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLDGQVIAVKRLSG---------------------RTIRLMGCSLHGAERILVYEFMPN 477 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~---------------------~~v~l~g~~~~~~~~~lV~Ey~~~ 477 (664)
++|+..+.||+|+||.||++..+++..+|+|.+.. +++++++++...+..++||||+++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~ 83 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMEN 83 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCC
Confidence 45778899999999999999998888999998753 368999999999999999999999
Q ss_pred CchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc---------------------------ccc
Q 040814 478 KSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT---------------------------NRV 530 (664)
Q Consensus 478 gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~---------------------------~~~ 530 (664)
|+|.+++... ...+++..+..++.|++.||.|||+.+++|+|+++.|. ...
T Consensus 84 ~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~ 161 (256)
T cd05114 84 GCLLNYLRQR--QGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGA 161 (256)
T ss_pred CcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCCC
Confidence 9999998542 24689999999999999999999999999999988771 001
Q ss_pred cccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHH
Q 040814 531 VGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELL 609 (664)
Q Consensus 531 ~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 609 (664)
.++..|+|||++.+..++.++||||||+++|||++ |+.||......+. .... .++. ....+.....
T Consensus 162 ~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~---~~~i-~~~~---------~~~~~~~~~~ 228 (256)
T cd05114 162 KFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEV---VEMI-SRGF---------RLYRPKLASM 228 (256)
T ss_pred CCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHH---HHHH-HCCC---------CCCCCCCCCH
Confidence 23457999999998889999999999999999999 8989864332211 1111 1110 0111222335
Q ss_pred HHHHHHHhcccccCCCCCCHHHHHHHHh
Q 040814 610 RCIHAGLLCVHDQAVNRPTMADVVSCLR 637 (664)
Q Consensus 610 ~l~~l~~~Cl~~dP~~RPt~~evl~~L~ 637 (664)
.+.+++.+||+.+|++||+++++++.|.
T Consensus 229 ~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 229 TVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred HHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 6788999999999999999999999873
No 34
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.96 E-value=2.3e-28 Score=252.87 Aligned_cols=207 Identities=27% Similarity=0.466 Sum_probs=164.7
Q ss_pred cCccccceeccCCCcCEEEEEEcC------CcEEEEEeccc-----------------------ceEEEEeEeecCCeeE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD------GQVIAVKRLSG-----------------------RTIRLMGCSLHGAERI 469 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~------~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~ 469 (664)
++|++.+.||+|+||.||+|.... .+.||+|.+.. +++++++++......+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 467778999999999999998643 26799998853 2688999999888999
Q ss_pred EEEeccCCCchhHHhhcccc-------------cCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc---------
Q 040814 470 LVYEFMPNKSLDFFIFDSVK-------------KKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------- 527 (664)
Q Consensus 470 lV~Ey~~~gsL~~~l~~~~~-------------~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------- 527 (664)
++|||+++++|.+++..... ...+++..+..++.|++.||.|||+.+++|+|+++.|.
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~ 164 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVK 164 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcEE
Confidence 99999999999999964311 14688999999999999999999999999999998771
Q ss_pred -------------------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHh
Q 040814 528 -------------------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWK 587 (664)
Q Consensus 528 -------------------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~ 587 (664)
....+++.|+|||.+.+..++.++|||||||++|||++ |..||......+..
T Consensus 165 L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~-------- 236 (283)
T cd05048 165 ISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVI-------- 236 (283)
T ss_pred ECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHH--------
Confidence 01234567999999998899999999999999999998 99998654322111
Q ss_pred cCChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhc
Q 040814 588 EGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQ 638 (664)
Q Consensus 588 ~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 638 (664)
..+........+.....++.+++.+||+.+|.+||++.||++.|++
T Consensus 237 -----~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 237 -----EMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred -----HHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 1111111122334456778899999999999999999999999975
No 35
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.96 E-value=2.8e-28 Score=249.66 Aligned_cols=207 Identities=24% Similarity=0.342 Sum_probs=165.1
Q ss_pred cCccccceeccCCCcCEEEEEEcC-CcEEEEEeccc---------------------ceEEEEeEeecCCeeEEEEeccC
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG---------------------RTIRLMGCSLHGAERILVYEFMP 476 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~---------------------~~v~l~g~~~~~~~~~lV~Ey~~ 476 (664)
.+|+..+.||+|+||.||+|..++ ++.||+|++.. +++++++++..++..++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT 85 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCC
Confidence 357778999999999999999754 88999998753 35889999999999999999999
Q ss_pred CCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc---------------------------c
Q 040814 477 NKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN---------------------------R 529 (664)
Q Consensus 477 ~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~---------------------------~ 529 (664)
+++|.+++... ....+++..++.++.|+++||+|||+.+.+|+|+++.|.- .
T Consensus 86 ~~~L~~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~ 164 (263)
T cd05052 86 YGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 164 (263)
T ss_pred CCcHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccceeeccCC
Confidence 99999998542 2356899999999999999999999999999999988710 0
Q ss_pred ccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHH
Q 040814 530 VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENEL 608 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 608 (664)
..++..|+|||.+.+..++.++|||||||++|||++ |..|+......+.. ..+........+....
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~-------------~~~~~~~~~~~~~~~~ 231 (263)
T cd05052 165 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-------------ELLEKGYRMERPEGCP 231 (263)
T ss_pred CCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH-------------HHHHCCCCCCCCCCCC
Confidence 112457999999999999999999999999999998 89887643221111 1111111222333345
Q ss_pred HHHHHHHHhcccccCCCCCCHHHHHHHHhcc
Q 040814 609 LRCIHAGLLCVHDQAVNRPTMADVVSCLRQN 639 (664)
Q Consensus 609 ~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 639 (664)
..+.+++.+||+.+|++|||+.+++++|+++
T Consensus 232 ~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 232 PKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred HHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 6688889999999999999999999999864
No 36
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.96 E-value=3.5e-28 Score=263.52 Aligned_cols=212 Identities=18% Similarity=0.278 Sum_probs=165.4
Q ss_pred HhcCccccceeccCCCcCEEEEEEcC------CcEEEEEecc------------------------cceEEEEeEeecCC
Q 040814 417 ATNNFSTTNKLGEGGFGPVYKGKLLD------GQVIAVKRLS------------------------GRTIRLMGCSLHGA 466 (664)
Q Consensus 417 ~t~~~~~~~~lg~G~fg~Vy~~~~~~------~~~vavK~~~------------------------~~~v~l~g~~~~~~ 466 (664)
..++|.+.++||+|+||.||+|.... +..||||++. +++++++++|.+..
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~ 114 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG 114 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence 35678889999999999999998521 3579999884 24789999999999
Q ss_pred eeEEEEeccCCCchhHHhhcccc---------------------------------------------------------
Q 040814 467 ERILVYEFMPNKSLDFFIFDSVK--------------------------------------------------------- 489 (664)
Q Consensus 467 ~~~lV~Ey~~~gsL~~~l~~~~~--------------------------------------------------------- 489 (664)
..+||||||++|+|.++|+....
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (400)
T cd05105 115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI 194 (400)
T ss_pred ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence 99999999999999999864210
Q ss_pred ------------------------------------cCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc------
Q 040814 490 ------------------------------------KKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------ 527 (664)
Q Consensus 490 ------------------------------------~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------ 527 (664)
...+++..+..++.||++||.|||+.+++|+|+++.|.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~ 274 (400)
T cd05105 195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGK 274 (400)
T ss_pred hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCC
Confidence 12478899999999999999999999999999998771
Q ss_pred ----------------------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhh
Q 040814 528 ----------------------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGY 584 (664)
Q Consensus 528 ----------------------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~ 584 (664)
....++..|||||.+.+..++.++|||||||++|||++ |..||.........
T Consensus 275 ~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~----- 349 (400)
T cd05105 275 IVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTF----- 349 (400)
T ss_pred EEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHH-----
Confidence 01224567999999998899999999999999999997 88998643221111
Q ss_pred HHhcCChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhccc
Q 040814 585 LWKEGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNN 640 (664)
Q Consensus 585 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 640 (664)
...+........+......+.+++.+||+.+|++|||+.+|+++|+.+.
T Consensus 350 -------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 350 -------YNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred -------HHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 0011111111223334566888999999999999999999999998765
No 37
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.96 E-value=1.2e-28 Score=261.67 Aligned_cols=208 Identities=19% Similarity=0.240 Sum_probs=163.7
Q ss_pred cCccccceeccCCCcCEEEEEEcC-CcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVY 472 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~ 472 (664)
++|++.+.||+|+||.||+|+..+ ++.||||++.+ +++++++++.+++..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 468899999999999999999864 89999998742 3688999999999999999
Q ss_pred eccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-----------------------cc
Q 040814 473 EFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-----------------------NR 529 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-----------------------~~ 529 (664)
||+++|+|.+++. ....+++..+..++.||+.||.|||+.+++|+|+++.|. ..
T Consensus 81 e~~~g~~L~~~l~---~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~ 157 (333)
T cd05600 81 EYVPGGDFRTLLN---NLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANS 157 (333)
T ss_pred eCCCCCCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCcccccccCC
Confidence 9999999999994 345789999999999999999999999999999998871 23
Q ss_pred ccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHH
Q 040814 530 VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELL 609 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 609 (664)
..||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+ .... .................
T Consensus 158 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i---~~~~---~~~~~~~~~~~~~~~s~ 231 (333)
T cd05600 158 VVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENL---KYWK---ETLQRPVYDDPRFNLSD 231 (333)
T ss_pred cccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHH---Hhcc---ccccCCCCCccccccCH
Confidence 46899999999999999999999999999999999999998654322211111 0000 00000000000012345
Q ss_pred HHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 610 RCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 610 ~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
.+.+++.+||+.+|.+||++.++++.
T Consensus 232 ~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 232 EAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred HHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 57788888999999999999999865
No 38
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.96 E-value=1.8e-28 Score=250.33 Aligned_cols=209 Identities=25% Similarity=0.383 Sum_probs=168.5
Q ss_pred HhcCccccceeccCCCcCEEEEEEcCCcEEEEEeccc----------------------ceEEEEeEeecCCeeEEEEec
Q 040814 417 ATNNFSTTNKLGEGGFGPVYKGKLLDGQVIAVKRLSG----------------------RTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 417 ~t~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~----------------------~~v~l~g~~~~~~~~~lV~Ey 474 (664)
+..+|+..++||+|+||.||+|...+++.+|+|.+.. +++++++++...+..++||||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 83 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL 83 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence 3456888899999999999999998899999998853 257889999999999999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc--------------------------
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN-------------------------- 528 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~-------------------------- 528 (664)
+++++|.+++.+. ....+++..+.+++.||+.||.|||+.+++|+|+++.|.-
T Consensus 84 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~ 162 (261)
T cd05148 84 MEKGSLLAFLRSP-EGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSS 162 (261)
T ss_pred cccCCHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCcccccc
Confidence 9999999999653 3457899999999999999999999999999999987710
Q ss_pred cccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHH
Q 040814 529 RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENE 607 (664)
Q Consensus 529 ~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 607 (664)
...++..|+|||.+.+..++.++||||||+++|||++ |+.||......+.. ..+......+.+...
T Consensus 163 ~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~-------------~~~~~~~~~~~~~~~ 229 (261)
T cd05148 163 DKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVY-------------DQITAGYRMPCPAKC 229 (261)
T ss_pred CCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHH-------------HHHHhCCcCCCCCCC
Confidence 0123457999999998899999999999999999998 88888543321111 111111122233445
Q ss_pred HHHHHHHHHhcccccCCCCCCHHHHHHHHhcc
Q 040814 608 LLRCIHAGLLCVHDQAVNRPTMADVVSCLRQN 639 (664)
Q Consensus 608 ~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 639 (664)
...+.+++.+||+.+|.+|||++++++.|+.+
T Consensus 230 ~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 230 PQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred CHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 56788999999999999999999999999863
No 39
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.95 E-value=4.9e-29 Score=266.18 Aligned_cols=210 Identities=29% Similarity=0.407 Sum_probs=165.9
Q ss_pred hcCccccceeccCCCcCEEEEEEcC--C--cE-EEEEecc-------------------------cceEEEEeEeecCCe
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLLD--G--QV-IAVKRLS-------------------------GRTIRLMGCSLHGAE 467 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~~--~--~~-vavK~~~-------------------------~~~v~l~g~~~~~~~ 467 (664)
-++-...++||+|.||.||+|++.. + .. ||||... +++|+++|++.....
T Consensus 156 H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~P 235 (474)
T KOG0194|consen 156 HSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEP 235 (474)
T ss_pred ccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCc
Confidence 3444556899999999999999754 2 23 8999775 347999999999999
Q ss_pred eEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc-------------------
Q 040814 468 RILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN------------------- 528 (664)
Q Consensus 468 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~------------------- 528 (664)
.+||||+|+||+|++||... .+.++..++++++.+.|+||+|||+.+.+|+|+...|.-
T Consensus 236 l~ivmEl~~gGsL~~~L~k~--~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~ 313 (474)
T KOG0194|consen 236 LMLVMELCNGGSLDDYLKKN--KKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGS 313 (474)
T ss_pred cEEEEEecCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccCCc
Confidence 99999999999999999532 236999999999999999999999999999988776621
Q ss_pred -------cccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhC
Q 040814 529 -------RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALD 600 (664)
Q Consensus 529 -------~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 600 (664)
...-...|+|||.+....|+.|+|||||||++||+++ |..|+......+.. ..+......
T Consensus 314 ~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~------------~kI~~~~~r 381 (474)
T KOG0194|consen 314 QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVK------------AKIVKNGYR 381 (474)
T ss_pred ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHH------------HHHHhcCcc
Confidence 0012367999999999999999999999999999999 78887644322111 111122223
Q ss_pred CCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhcccc
Q 040814 601 GPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQ 641 (664)
Q Consensus 601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~ 641 (664)
...+...+..+..++.+||..+|++||||.++.+.|+.+..
T Consensus 382 ~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~ 422 (474)
T KOG0194|consen 382 MPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEK 422 (474)
T ss_pred CCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHh
Confidence 34455566677777889999999999999999999988764
No 40
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.95 E-value=2.2e-28 Score=258.52 Aligned_cols=193 Identities=22% Similarity=0.298 Sum_probs=155.0
Q ss_pred CccccceeccCCCcCEEEEEEcC-CcEEEEEeccc--------------------------ceEEEEeEeecCCeeEEEE
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG--------------------------RTIRLMGCSLHGAERILVY 472 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~--------------------------~~v~l~g~~~~~~~~~lV~ 472 (664)
+|++.+.||+|+||.||+|+..+ ++.||||++.+ .++++.+++...+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 47888999999999999999754 78999998752 1467778888889999999
Q ss_pred eccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-------------------------
Q 040814 473 EFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------------- 527 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------------- 527 (664)
||+++|+|..++. ....+++..+..++.||+.||.|||+.+++|+|+++.|.
T Consensus 81 E~~~~g~L~~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~ 157 (324)
T cd05587 81 EYVNGGDLMYHIQ---QVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKT 157 (324)
T ss_pred cCCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCc
Confidence 9999999999984 345789999999999999999999999999999998771
Q ss_pred -ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHH
Q 040814 528 -NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPEN 606 (664)
Q Consensus 528 -~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 606 (664)
....||+.|+|||++.+..++.++|||||||++|||++|+.||......+... . +... ....+..
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~---~---------i~~~--~~~~~~~ 223 (324)
T cd05587 158 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQ---S---------IMEH--NVSYPKS 223 (324)
T ss_pred eeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHH---H---------HHcC--CCCCCCC
Confidence 12358999999999999999999999999999999999999986443221110 0 1100 1122333
Q ss_pred HHHHHHHHHHhcccccCCCCCCH
Q 040814 607 ELLRCIHAGLLCVHDQAVNRPTM 629 (664)
Q Consensus 607 ~~~~l~~l~~~Cl~~dP~~RPt~ 629 (664)
....+.+++.+||+.||.+||+.
T Consensus 224 ~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 224 LSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred CCHHHHHHHHHHhhcCHHHcCCC
Confidence 34567788889999999999986
No 41
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.95 E-value=2.7e-28 Score=237.53 Aligned_cols=190 Identities=22% Similarity=0.277 Sum_probs=161.3
Q ss_pred hcCccccceeccCCCcCEEEEEEcC-CcEEEEEecccc-------------------------eEEEEeEeecCCeeEEE
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSGR-------------------------TIRLMGCSLHGAERILV 471 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~~-------------------------~v~l~g~~~~~~~~~lV 471 (664)
.++|+..+.||.|+||+|.+++.+. |..+|+|+++++ ++++++.+.+....+||
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence 3567788999999999999999865 889999999753 58999999999999999
Q ss_pred EeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc-----------------------cc
Q 040814 472 YEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN-----------------------TN 528 (664)
Q Consensus 472 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n-----------------------~~ 528 (664)
|||+++|.|..+| ++.+.+++..+.-+|.||+.||+|||+.+++.+|.+|+| +-
T Consensus 123 meyv~GGElFS~L---rk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~ 199 (355)
T KOG0616|consen 123 MEYVPGGELFSYL---RKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTW 199 (355)
T ss_pred EeccCCccHHHHH---HhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecCcEE
Confidence 9999999999999 456799999999999999999999999999999999998 34
Q ss_pred cccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCC--CCCHH
Q 040814 529 RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDG--PCPEN 606 (664)
Q Consensus 529 ~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~ 606 (664)
+.+||+.|+|||++....+..++|.|||||++|||+.|.+||..... .++.++++.+ .+|..
T Consensus 200 TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~----------------~~iY~KI~~~~v~fP~~ 263 (355)
T KOG0616|consen 200 TLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP----------------IQIYEKILEGKVKFPSY 263 (355)
T ss_pred EecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh----------------HHHHHHHHhCcccCCcc
Confidence 57899999999999999999999999999999999999999965432 2344444443 34444
Q ss_pred HHHHHHHHHHhcccccCCCC
Q 040814 607 ELLRCIHAGLLCVHDQAVNR 626 (664)
Q Consensus 607 ~~~~l~~l~~~Cl~~dP~~R 626 (664)
....+.+++...++.|-.+|
T Consensus 264 fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 264 FSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred cCHHHHHHHHHHHhhhhHhh
Confidence 44555666666777788777
No 42
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.95 E-value=6.1e-28 Score=255.99 Aligned_cols=215 Identities=21% Similarity=0.250 Sum_probs=164.0
Q ss_pred hcCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-----------------------ceEEEEeEeecCCeeEEEEe
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-----------------------RTIRLMGCSLHGAERILVYE 473 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV~E 473 (664)
.++|++.+.||+|+||.||+++.. ++..+|+|.+.. +++++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 468999999999999999999985 488999997742 36899999999999999999
Q ss_pred ccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhc-Ccccccccccc------------------------cc
Q 040814 474 FMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKY-SRLRMNESKVN------------------------TN 528 (664)
Q Consensus 474 y~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~-~~~h~d~~~~n------------------------~~ 528 (664)
|+++|+|.+++. ....+++..+..++.|++.||.|||+. +++|+|+++.| ..
T Consensus 84 ~~~~~~L~~~l~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 160 (331)
T cd06649 84 HMDGGSLDQVLK---EAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 160 (331)
T ss_pred cCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccccc
Confidence 999999999994 345789999999999999999999985 58999999887 12
Q ss_pred cccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHh---------------------
Q 040814 529 RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWK--------------------- 587 (664)
Q Consensus 529 ~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~--------------------- 587 (664)
...||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+.....
T Consensus 161 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (331)
T cd06649 161 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPV 240 (331)
T ss_pred cCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccc
Confidence 23588999999999999999999999999999999999999864332111100000000
Q ss_pred ---------cCChhHhhhhhhCCCC----CHHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 588 ---------EGKASELMEAALDGPC----PENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 588 ---------~~~~~~~~d~~~~~~~----~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
.....++.+....... ......++.+++.+||+.||++|||+.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 241 SGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH 301 (331)
T ss_pred cccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000111111111111 11234568889999999999999999999865
No 43
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.95 E-value=1.3e-28 Score=257.02 Aligned_cols=196 Identities=23% Similarity=0.312 Sum_probs=167.5
Q ss_pred cCccccceeccCCCcCEEEEEEcC-CcEEEEEeccc------------------------ceEEEEeEeecCCeeEEEEe
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG------------------------RTIRLMGCSLHGAERILVYE 473 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~------------------------~~v~l~g~~~~~~~~~lV~E 473 (664)
++|.+.+.||+|+||.||||+-+. .+.||+|.+.+ ++|.+++++....+.++|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 578888999999999999999755 89999998854 36889999999999999999
Q ss_pred ccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc--------------------------c
Q 040814 474 FMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN--------------------------T 527 (664)
Q Consensus 474 y~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n--------------------------~ 527 (664)
||.+ +|..+|. ..+.++++.+..|+.++..||.|||+.+++|+|.+|.| .
T Consensus 82 ~a~g-~L~~il~---~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vl 157 (808)
T KOG0597|consen 82 YAVG-DLFTILE---QDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVL 157 (808)
T ss_pred hhhh-hHHHHHH---hccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCceee
Confidence 9987 9999994 45789999999999999999999999999999999987 2
Q ss_pred ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCC--CCH
Q 040814 528 NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGP--CPE 605 (664)
Q Consensus 528 ~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~ 605 (664)
..+.||+-|||||.+.+++|+..+|.||+|||+||+++|++||... .+.+++..++.++ .|.
T Consensus 158 tsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~----------------si~~Lv~~I~~d~v~~p~ 221 (808)
T KOG0597|consen 158 TSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR----------------SITQLVKSILKDPVKPPS 221 (808)
T ss_pred eeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH----------------HHHHHHHHHhcCCCCCcc
Confidence 3457999999999999999999999999999999999999998532 2234444444332 344
Q ss_pred HHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 606 NELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 606 ~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
.....++.+....+++||.+|.|..+++.
T Consensus 222 ~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 222 TASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred cccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 56667888888899999999999999874
No 44
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.95 E-value=7.2e-28 Score=246.17 Aligned_cols=207 Identities=26% Similarity=0.372 Sum_probs=165.7
Q ss_pred hcCccccceeccCCCcCEEEEEEcCCcEEEEEeccc---------------------ceEEEEeEeecCCeeEEEEeccC
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLLDGQVIAVKRLSG---------------------RTIRLMGCSLHGAERILVYEFMP 476 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~---------------------~~v~l~g~~~~~~~~~lV~Ey~~ 476 (664)
.++|++.+.||+|++|.||+|...+++.||+|.++. +++++++++...+..++||||++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 84 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMK 84 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeeccc
Confidence 456888999999999999999987788999998853 26888999999999999999999
Q ss_pred CCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc------------------------cccc
Q 040814 477 NKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN------------------------RVVG 532 (664)
Q Consensus 477 ~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~------------------------~~~G 532 (664)
+++|.+++... ....+++..+..++.|++.||.|||+.+++|.|+++.|.- ...|
T Consensus 85 ~~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 163 (261)
T cd05068 85 YGSLLEYLQGG-AGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREG 163 (261)
T ss_pred CCcHHHHHhcc-CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCC
Confidence 99999999542 2347899999999999999999999999999999988710 0112
Q ss_pred ---cCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHH
Q 040814 533 ---TYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENEL 608 (664)
Q Consensus 533 ---t~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 608 (664)
+..|+|||++.+..++.++||||||+++|||++ |+.||........ .. .+........+....
T Consensus 164 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~---~~----------~~~~~~~~~~~~~~~ 230 (261)
T cd05068 164 AKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEV---LQ----------QVDQGYRMPCPPGCP 230 (261)
T ss_pred CcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHH---HH----------HHHcCCCCCCCCcCC
Confidence 236999999998899999999999999999999 9988864322111 10 111111112233345
Q ss_pred HHHHHHHHhcccccCCCCCCHHHHHHHHhc
Q 040814 609 LRCIHAGLLCVHDQAVNRPTMADVVSCLRQ 638 (664)
Q Consensus 609 ~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 638 (664)
..+.+++.+||+.+|++||++.++++.|++
T Consensus 231 ~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 231 KELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred HHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 678889999999999999999999999986
No 45
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.95 E-value=1.5e-28 Score=251.62 Aligned_cols=205 Identities=24% Similarity=0.330 Sum_probs=159.1
Q ss_pred cCccccceeccCCCcCEEEEEEcC-CcEEEEEecc----------------------cceEEEEeEeecCC--eeEEEEe
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLS----------------------GRTIRLMGCSLHGA--ERILVYE 473 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~----------------------~~~v~l~g~~~~~~--~~~lV~E 473 (664)
.++...+.||+|+||.||++...+ |+..|||.+. +++|+.+|.....+ ...+.||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 356667999999999999999855 8999999763 34799999855444 6899999
Q ss_pred ccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc---------------------------
Q 040814 474 FMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN--------------------------- 526 (664)
Q Consensus 474 y~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n--------------------------- 526 (664)
|+++|+|.+++.+. ...|++..+.++.+||++||+|||+++++|+|+++.|
T Consensus 97 y~~~GsL~~~~~~~--g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~ 174 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRY--GGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTK 174 (313)
T ss_pred ccCCCcHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccccccccccc
Confidence 99999999999542 1279999999999999999999999999999999877
Q ss_pred ---cccccccCCccchhhhccCC-CCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCC
Q 040814 527 ---TNRVVGTYGYMAPEYAMNGI-VSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGP 602 (664)
Q Consensus 527 ---~~~~~Gt~~Y~APE~~~~~~-~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 602 (664)
.....||+.|||||++.++. ...++||||+||++.||+||++|+... .+....+.+...+. ....
T Consensus 175 ~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~--~~~~~~~~~ig~~~---------~~P~ 243 (313)
T KOG0198|consen 175 SDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF--FEEAEALLLIGRED---------SLPE 243 (313)
T ss_pred ccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh--cchHHHHHHHhccC---------CCCC
Confidence 11256999999999999643 345999999999999999999998643 11111111111111 1124
Q ss_pred CCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHH
Q 040814 603 CPENELLRCIHAGLLCVHDQAVNRPTMADVVSCL 636 (664)
Q Consensus 603 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L 636 (664)
+|........+++.+|++.+|+.|||++++++..
T Consensus 244 ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hp 277 (313)
T KOG0198|consen 244 IPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHP 277 (313)
T ss_pred CCcccCHHHHHHHHHHhhcCcccCcCHHHHhhCh
Confidence 4455556677788889999999999999999764
No 46
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.95 E-value=3.2e-28 Score=253.31 Aligned_cols=200 Identities=18% Similarity=0.161 Sum_probs=160.4
Q ss_pred cCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVY 472 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~ 472 (664)
++|++.+.||+|+||.||+|... +++.||+|++.. +++++++++.++...++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 47888999999999999999985 489999998742 3578888888889999999
Q ss_pred eccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-----------------------cc
Q 040814 473 EFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-----------------------NR 529 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-----------------------~~ 529 (664)
||+++|+|.+++. +...+++..+..++.||+.||.|||+.+++|+|+++.|. ..
T Consensus 81 e~~~~~~L~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~ 157 (291)
T cd05612 81 EYVPGGELFSYLR---NSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWT 157 (291)
T ss_pred eCCCCCCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCCccc
Confidence 9999999999994 345789999999999999999999999999999998871 12
Q ss_pred ccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHH
Q 040814 530 VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELL 609 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 609 (664)
..||+.|+|||++.+..++.++|||||||++|||++|+.||......+. .. .+... ....+.....
T Consensus 158 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~---~~---------~i~~~--~~~~~~~~~~ 223 (291)
T cd05612 158 LCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGI---YE---------KILAG--KLEFPRHLDL 223 (291)
T ss_pred ccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HH---------HHHhC--CcCCCccCCH
Confidence 3588999999999998899999999999999999999999864322111 10 01110 1122223345
Q ss_pred HHHHHHHhcccccCCCCCC-----HHHHHHH
Q 040814 610 RCIHAGLLCVHDQAVNRPT-----MADVVSC 635 (664)
Q Consensus 610 ~l~~l~~~Cl~~dP~~RPt-----~~evl~~ 635 (664)
.+.+++.+||+.||.+||+ ++++++.
T Consensus 224 ~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 224 YAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred HHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 6778888999999999995 7777754
No 47
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.95 E-value=7.1e-28 Score=250.58 Aligned_cols=210 Identities=24% Similarity=0.379 Sum_probs=165.3
Q ss_pred cCccccceeccCCCcCEEEEEEc------CCcEEEEEeccc----------------------ceEEEEeEeecCCeeEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL------DGQVIAVKRLSG----------------------RTIRLMGCSLHGAERIL 470 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~~~~----------------------~~v~l~g~~~~~~~~~l 470 (664)
.+|...+.||+|+||.||+|+.. ++..+++|.+.. +++++++++..++..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 35777899999999999999742 356799998752 36899999999999999
Q ss_pred EEeccCCCchhHHhhccc-------------ccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc----------
Q 040814 471 VYEFMPNKSLDFFIFDSV-------------KKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT---------- 527 (664)
Q Consensus 471 V~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~---------- 527 (664)
||||+++++|.+++.... ....+++..++.++.||+.||+|||+.+++|+|+++.|.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l 164 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKI 164 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEE
Confidence 999999999999996431 124589999999999999999999999999999998871
Q ss_pred ------------------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhc
Q 040814 528 ------------------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKE 588 (664)
Q Consensus 528 ------------------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~ 588 (664)
....++..|+|||.+.+..++.++|||||||++|||+| |+.||......+. ... ...
T Consensus 165 ~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~---~~~-~~~ 240 (291)
T cd05094 165 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEV---IEC-ITQ 240 (291)
T ss_pred CCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH---HHH-HhC
Confidence 11224567999999999999999999999999999999 9999764332211 110 111
Q ss_pred CChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhcccc
Q 040814 589 GKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQ 641 (664)
Q Consensus 589 ~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~ 641 (664)
+.. ...+......+.+++.+||+.+|++|||+.+|+++|+++..
T Consensus 241 ~~~---------~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~ 284 (291)
T cd05094 241 GRV---------LERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK 284 (291)
T ss_pred CCC---------CCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence 111 11122234567889999999999999999999999999863
No 48
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.95 E-value=6.6e-28 Score=250.04 Aligned_cols=213 Identities=17% Similarity=0.184 Sum_probs=159.7
Q ss_pred cCccccceeccCCCcCEEEEEEcC-CcEEEEEeccc------------------------ceEEEEeEeecCCeeEEEEe
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG------------------------RTIRLMGCSLHGAERILVYE 473 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~------------------------~~v~l~g~~~~~~~~~lV~E 473 (664)
++|++.+.||+|+||.||+++.+. ++.||||++.. +++++++++..++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 468899999999999999999854 88999998752 35788889988999999999
Q ss_pred ccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------
Q 040814 474 FMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-------------------------- 527 (664)
Q Consensus 474 y~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-------------------------- 527 (664)
|++++.+..+.. ....+++..+..++.||+.||.|||+.+++|+|+++.|.
T Consensus 81 ~~~~~~l~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 157 (287)
T cd07848 81 YVEKNMLELLEE---MPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNAN 157 (287)
T ss_pred cCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCccccccccccc
Confidence 999988765542 245799999999999999999999999999999888761
Q ss_pred -ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHh------------cCChhHh
Q 040814 528 -NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWK------------EGKASEL 594 (664)
Q Consensus 528 -~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~------------~~~~~~~ 594 (664)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...+..+....+..... .......
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (287)
T cd07848 158 YTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGL 237 (287)
T ss_pred ccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhccc
Confidence 123578899999999988999999999999999999999999975443222111111000 0000000
Q ss_pred hhhhhCC------CCCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 595 MEAALDG------PCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 595 ~d~~~~~------~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
..+.... .........+.+++.+||+.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 238 RFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred ccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000000 000112345888999999999999999999875
No 49
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.95 E-value=7.9e-28 Score=248.24 Aligned_cols=209 Identities=23% Similarity=0.405 Sum_probs=162.9
Q ss_pred HhcCccccceeccCCCcCEEEEEEc------CCcEEEEEeccc-----------------------ceEEEEeEeecCCe
Q 040814 417 ATNNFSTTNKLGEGGFGPVYKGKLL------DGQVIAVKRLSG-----------------------RTIRLMGCSLHGAE 467 (664)
Q Consensus 417 ~t~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~~~~-----------------------~~v~l~g~~~~~~~ 467 (664)
++++|+..+.||+|+||.||+|... .++.||+|+++. +++++++++..+..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4678999999999999999999753 256799998742 36899999999999
Q ss_pred eEEEEeccCCCchhHHhhcccc-------cCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-------------
Q 040814 468 RILVYEFMPNKSLDFFIFDSVK-------KKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------- 527 (664)
Q Consensus 468 ~~lV~Ey~~~gsL~~~l~~~~~-------~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------- 527 (664)
.++||||+++|+|.+++..... ...+++..+..++.|++.||.|||+.+.+|+|+++.|.
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~df 163 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDF 163 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECCC
Confidence 9999999999999999854221 23468899999999999999999999999999998871
Q ss_pred ---------------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCCh
Q 040814 528 ---------------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKA 591 (664)
Q Consensus 528 ---------------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 591 (664)
....++..|||||++.+..++.++|||||||++|||++ |..||......+ ..... .+..
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~---~~~~~-~~~~- 238 (277)
T cd05062 164 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQ---VLRFV-MEGG- 238 (277)
T ss_pred CCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHH-HcCC-
Confidence 00123567999999998899999999999999999999 688875432211 11110 0110
Q ss_pred hHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhc
Q 040814 592 SELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQ 638 (664)
Q Consensus 592 ~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 638 (664)
....+......+.+++.+||+.+|++|||+.|++++|++
T Consensus 239 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 239 --------LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred --------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 011223344567889999999999999999999999863
No 50
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.95 E-value=4.4e-28 Score=256.15 Aligned_cols=193 Identities=22% Similarity=0.284 Sum_probs=155.8
Q ss_pred CccccceeccCCCcCEEEEEEcC-CcEEEEEeccc--------------------------ceEEEEeEeecCCeeEEEE
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG--------------------------RTIRLMGCSLHGAERILVY 472 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~--------------------------~~v~l~g~~~~~~~~~lV~ 472 (664)
+|.+.+.||+|+||.||+|+... ++.||||++.+ .++++.+++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 47788999999999999999754 78999998753 1467888888889999999
Q ss_pred eccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-------------------------
Q 040814 473 EFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------------- 527 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------------- 527 (664)
||+++|+|..++. ....+++..+..++.||+.||.|||+.+++|+|+++.|.
T Consensus 81 E~~~~g~L~~~~~---~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~ 157 (323)
T cd05616 81 EYVNGGDLMYQIQ---QVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVT 157 (323)
T ss_pred cCCCCCCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCc
Confidence 9999999999884 345799999999999999999999999999999998771
Q ss_pred -ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHH
Q 040814 528 -NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPEN 606 (664)
Q Consensus 528 -~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 606 (664)
....||+.|+|||++.+..++.++|||||||++|||++|+.||........ .. .+... ....+..
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~---~~---------~i~~~--~~~~p~~ 223 (323)
T cd05616 158 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL---FQ---------SIMEH--NVAYPKS 223 (323)
T ss_pred cccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHH---HH---------HHHhC--CCCCCCc
Confidence 123578999999999999999999999999999999999999865432211 11 11111 1122333
Q ss_pred HHHHHHHHHHhcccccCCCCCCH
Q 040814 607 ELLRCIHAGLLCVHDQAVNRPTM 629 (664)
Q Consensus 607 ~~~~l~~l~~~Cl~~dP~~RPt~ 629 (664)
....+.+++.+|++.+|++|++.
T Consensus 224 ~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 224 MSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred CCHHHHHHHHHHcccCHHhcCCC
Confidence 44567888899999999999984
No 51
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.95 E-value=6.8e-28 Score=256.19 Aligned_cols=211 Identities=23% Similarity=0.357 Sum_probs=162.3
Q ss_pred hcCccccceeccCCCcCEEEEEEc------CCcEEEEEeccc------------------------ceEEEEeEeec-CC
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLL------DGQVIAVKRLSG------------------------RTIRLMGCSLH-GA 466 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~~~~------------------------~~v~l~g~~~~-~~ 466 (664)
.++|++.+.||+|+||.||+|... .++.||+|+++. ++++++++|.. +.
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~ 85 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG 85 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence 457888999999999999999742 257899998742 35788887764 45
Q ss_pred eeEEEEeccCCCchhHHhhcccc---------------------------------------------------------
Q 040814 467 ERILVYEFMPNKSLDFFIFDSVK--------------------------------------------------------- 489 (664)
Q Consensus 467 ~~~lV~Ey~~~gsL~~~l~~~~~--------------------------------------------------------- 489 (664)
..+++|||+++++|.++|.....
T Consensus 86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (337)
T cd05054 86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL 165 (337)
T ss_pred CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence 67899999999999999853211
Q ss_pred -cCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc----------------------------ccccccCCccchh
Q 040814 490 -KKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT----------------------------NRVVGTYGYMAPE 540 (664)
Q Consensus 490 -~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~----------------------------~~~~Gt~~Y~APE 540 (664)
...++|..+..++.||+.||.|||+.+++|+|+++.|. ....++..|||||
T Consensus 166 ~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE 245 (337)
T cd05054 166 YKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 245 (337)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcH
Confidence 13689999999999999999999999999999998871 0112356799999
Q ss_pred hhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHHHHHHhcc
Q 040814 541 YAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRCIHAGLLCV 619 (664)
Q Consensus 541 ~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl 619 (664)
++.+..++.++|||||||+||||++ |+.||......+.. . ..+........+......+.+++.+||
T Consensus 246 ~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~--~----------~~~~~~~~~~~~~~~~~~~~~l~~~cl 313 (337)
T cd05054 246 SIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEF--C----------RRLKEGTRMRAPEYATPEIYSIMLDCW 313 (337)
T ss_pred HhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHH--H----------HHHhccCCCCCCccCCHHHHHHHHHHc
Confidence 9999999999999999999999998 99998643222111 0 111111111122334456889999999
Q ss_pred cccCCCCCCHHHHHHHHhccc
Q 040814 620 HDQAVNRPTMADVVSCLRQNN 640 (664)
Q Consensus 620 ~~dP~~RPt~~evl~~L~~~~ 640 (664)
+.+|++||++.||+++|+.+.
T Consensus 314 ~~~p~~RPs~~ell~~l~~~~ 334 (337)
T cd05054 314 HNNPEDRPTFSELVEILGDLL 334 (337)
T ss_pred cCChhhCcCHHHHHHHHHHHH
Confidence 999999999999999998865
No 52
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.95 E-value=1e-27 Score=244.66 Aligned_cols=204 Identities=23% Similarity=0.348 Sum_probs=161.4
Q ss_pred cCccccceeccCCCcCEEEEEEcCCcEEEEEeccc---------------------ceEEEEeEeecCCeeEEEEeccCC
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLDGQVIAVKRLSG---------------------RTIRLMGCSLHGAERILVYEFMPN 477 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~---------------------~~v~l~g~~~~~~~~~lV~Ey~~~ 477 (664)
++|.+.+.||+|+||.||+|...++..+|+|.+.. +++++++++.+....++||||+++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSN 83 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCC
Confidence 45778899999999999999987777899998753 368999999988889999999999
Q ss_pred CchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc---------------------------cc
Q 040814 478 KSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN---------------------------RV 530 (664)
Q Consensus 478 gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~---------------------------~~ 530 (664)
|+|.+++... ...+++..++.++.||+.||.|||+.+.+|.|+++.|.- ..
T Consensus 84 ~~l~~~i~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~ 161 (256)
T cd05113 84 GCLLNYLREH--GKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGS 161 (256)
T ss_pred CcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCceeecCCC
Confidence 9999998542 237899999999999999999999999999998887710 01
Q ss_pred cccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHH
Q 040814 531 VGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELL 609 (664)
Q Consensus 531 ~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 609 (664)
.++..|+|||.+.+..++.++|||||||++|||++ |+.||....... ..... .. ......+.....
T Consensus 162 ~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~---~~~~~-~~---------~~~~~~~~~~~~ 228 (256)
T cd05113 162 KFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE---TVEKV-SQ---------GLRLYRPHLASE 228 (256)
T ss_pred ccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH---HHHHH-hc---------CCCCCCCCCCCH
Confidence 23457999999998889999999999999999999 999985433211 11111 00 011111222346
Q ss_pred HHHHHHHhcccccCCCCCCHHHHHHHHh
Q 040814 610 RCIHAGLLCVHDQAVNRPTMADVVSCLR 637 (664)
Q Consensus 610 ~l~~l~~~Cl~~dP~~RPt~~evl~~L~ 637 (664)
.+.+++.+||+.+|++||++.+|++.|+
T Consensus 229 ~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 229 KVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred HHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 6788899999999999999999998874
No 53
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.95 E-value=1.8e-27 Score=243.09 Aligned_cols=206 Identities=26% Similarity=0.427 Sum_probs=162.7
Q ss_pred hcCccccceeccCCCcCEEEEEEcCCcEEEEEeccc---------------------ceEEEEeEeecCCeeEEEEeccC
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLLDGQVIAVKRLSG---------------------RTIRLMGCSLHGAERILVYEFMP 476 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~---------------------~~v~l~g~~~~~~~~~lV~Ey~~ 476 (664)
.++|++.++||+|+||.||+|..+++..+|+|.+.+ +++++++++. ....+++|||++
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~ 83 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMS 83 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecC
Confidence 356888899999999999999988888899998864 2578888774 456889999999
Q ss_pred CCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc---------------------------cc
Q 040814 477 NKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT---------------------------NR 529 (664)
Q Consensus 477 ~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~---------------------------~~ 529 (664)
+++|.+++.+. ....+++..+..++.|++.||.|||+.+++|+|+++.|. ..
T Consensus 84 ~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 162 (260)
T cd05070 84 KGSLLDFLKDG-EGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQG 162 (260)
T ss_pred CCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccccccC
Confidence 99999999642 234689999999999999999999999999999998871 00
Q ss_pred ccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHH
Q 040814 530 VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENEL 608 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 608 (664)
..++..|+|||.+.+..++.++||||||+++|||++ |+.||......+ ... .+......+.+....
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~---~~~----------~~~~~~~~~~~~~~~ 229 (260)
T cd05070 163 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE---VLE----------QVERGYRMPCPQDCP 229 (260)
T ss_pred CCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHH---HHH----------HHHcCCCCCCCCcCC
Confidence 123457999999988889999999999999999999 888885432111 111 111111122333445
Q ss_pred HHHHHHHHhcccccCCCCCCHHHHHHHHhc
Q 040814 609 LRCIHAGLLCVHDQAVNRPTMADVVSCLRQ 638 (664)
Q Consensus 609 ~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 638 (664)
..+.+++.+||+.+|++|||++++.+.|++
T Consensus 230 ~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 230 ISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred HHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 668899999999999999999999999875
No 54
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.95 E-value=1.5e-27 Score=244.59 Aligned_cols=207 Identities=24% Similarity=0.364 Sum_probs=164.0
Q ss_pred hcCccccceeccCCCcCEEEEEEcC----CcEEEEEeccc-----------------------ceEEEEeEeecCCeeEE
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLLD----GQVIAVKRLSG-----------------------RTIRLMGCSLHGAERIL 470 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~~----~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~l 470 (664)
.++|++.+.||+|+||.||+|..+. ...||||.++. +++++++++.+++..++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 82 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI 82 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence 3578889999999999999999743 45899998753 36889999999999999
Q ss_pred EEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc----------------------
Q 040814 471 VYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN---------------------- 528 (664)
Q Consensus 471 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~---------------------- 528 (664)
||||+++++|.+++... ...+++..+.+++.|++.||.|||+.+++|.|+++.|.-
T Consensus 83 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~ 160 (266)
T cd05033 83 ITEYMENGSLDKFLREN--DGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSE 160 (266)
T ss_pred EEEcCCCCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcccccc
Confidence 99999999999999542 347899999999999999999999999999999988710
Q ss_pred ------cccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCC
Q 040814 529 ------RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDG 601 (664)
Q Consensus 529 ------~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 601 (664)
...++..|+|||.+.+..++.++||||||+++|||++ |..||......+. .. .+......
T Consensus 161 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~---~~----------~~~~~~~~ 227 (266)
T cd05033 161 ATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDV---IK----------AVEDGYRL 227 (266)
T ss_pred cceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHH---HH----------HHHcCCCC
Confidence 0123457999999998899999999999999999998 9999754321111 10 00000111
Q ss_pred CCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhcc
Q 040814 602 PCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQN 639 (664)
Q Consensus 602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 639 (664)
+.+......+.+++.+||+.+|++||++.||+++|+++
T Consensus 228 ~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 228 PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 22233456688999999999999999999999999864
No 55
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.95 E-value=1.5e-27 Score=246.30 Aligned_cols=209 Identities=24% Similarity=0.354 Sum_probs=163.7
Q ss_pred HhcCccccceeccCCCcCEEEEEEcC------CcEEEEEeccc-----------------------ceEEEEeEeecCCe
Q 040814 417 ATNNFSTTNKLGEGGFGPVYKGKLLD------GQVIAVKRLSG-----------------------RTIRLMGCSLHGAE 467 (664)
Q Consensus 417 ~t~~~~~~~~lg~G~fg~Vy~~~~~~------~~~vavK~~~~-----------------------~~v~l~g~~~~~~~ 467 (664)
.+++|++.+.||+|+||.||+|...+ +..||+|.+.. +++++++++.+.+.
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 35678889999999999999999753 57899997742 36899999999889
Q ss_pred eEEEEeccCCCchhHHhhcccc----cCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccccc--------------
Q 040814 468 RILVYEFMPNKSLDFFIFDSVK----KKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTNR-------------- 529 (664)
Q Consensus 468 ~~lV~Ey~~~gsL~~~l~~~~~----~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~~-------------- 529 (664)
.++||||+++++|.+++..... ...+++..++.++.||+.||.|||+.+.+|+|+++.|.-.
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~df 163 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADF 163 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccC
Confidence 9999999999999999964321 1368999999999999999999999999999998877110
Q ss_pred -----------------ccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCCh
Q 040814 530 -----------------VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKA 591 (664)
Q Consensus 530 -----------------~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 591 (664)
...+..|+|||++.+..++.++|||||||++|||++ |+.||........ ..
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~---~~-------- 232 (277)
T cd05036 164 GMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEV---ME-------- 232 (277)
T ss_pred ccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH---HH--------
Confidence 011246999999999999999999999999999997 9999864332211 11
Q ss_pred hHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhc
Q 040814 592 SELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQ 638 (664)
Q Consensus 592 ~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 638 (664)
.+........+......+.+++.+||+.+|++||++.+|++.|++
T Consensus 233 --~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 233 --FVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred --HHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 111111112233344667888999999999999999999998863
No 56
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.95 E-value=7.4e-28 Score=255.14 Aligned_cols=199 Identities=21% Similarity=0.192 Sum_probs=159.9
Q ss_pred cCccccceeccCCCcCEEEEEEcC-CcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVY 472 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~ 472 (664)
++|++.+.||+|+||.||+|+... ++.||||++.+ +++++++++.+++..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 578889999999999999999854 89999998742 3689999999999999999
Q ss_pred eccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-----------------------cc
Q 040814 473 EFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-----------------------NR 529 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-----------------------~~ 529 (664)
||+++|+|.+++. +...+++..+..++.||+.||.|||+.+++|+|+++.|. ..
T Consensus 98 e~~~~~~L~~~l~---~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 174 (329)
T PTZ00263 98 EFVVGGELFTHLR---KAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFT 174 (329)
T ss_pred cCCCCChHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCcce
Confidence 9999999999984 345789999999999999999999999999999998771 12
Q ss_pred ccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHH
Q 040814 530 VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELL 609 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 609 (664)
..||+.|+|||++.+..++.++|||||||++|||++|+.||......+ ... .+.... ...+.....
T Consensus 175 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~---~~~---------~i~~~~--~~~p~~~~~ 240 (329)
T PTZ00263 175 LCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFR---IYE---------KILAGR--LKFPNWFDG 240 (329)
T ss_pred ecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHH---HHH---------HHhcCC--cCCCCCCCH
Confidence 458899999999999999999999999999999999999986432111 100 011111 112222334
Q ss_pred HHHHHHHhcccccCCCCCC-----HHHHHH
Q 040814 610 RCIHAGLLCVHDQAVNRPT-----MADVVS 634 (664)
Q Consensus 610 ~l~~l~~~Cl~~dP~~RPt-----~~evl~ 634 (664)
++.+++.+||+.||.+||+ ++++++
T Consensus 241 ~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 241 RARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred HHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 5678888999999999997 577663
No 57
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.95 E-value=8.8e-28 Score=255.53 Aligned_cols=201 Identities=21% Similarity=0.227 Sum_probs=160.6
Q ss_pred hcCccccceeccCCCcCEEEEEEcC--CcEEEEEecc-------------------------cceEEEEeEeecCCeeEE
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLLD--GQVIAVKRLS-------------------------GRTIRLMGCSLHGAERIL 470 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~~--~~~vavK~~~-------------------------~~~v~l~g~~~~~~~~~l 470 (664)
.++|++.+.||+|+||.||+|..+. +..||+|++. ++++++++++.+++..++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 3578889999999999999998644 4689999873 236899999999999999
Q ss_pred EEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc-----------------------c
Q 040814 471 VYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN-----------------------T 527 (664)
Q Consensus 471 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n-----------------------~ 527 (664)
|||||++|+|.+++. ....+++..+..++.||+.||.|||+.+++|+|+++.| .
T Consensus 109 v~Ey~~~g~L~~~i~---~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~ 185 (340)
T PTZ00426 109 VLEFVIGGEFFTFLR---RNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRT 185 (340)
T ss_pred EEeCCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCCc
Confidence 999999999999994 34579999999999999999999999999999999877 1
Q ss_pred ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHH
Q 040814 528 NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENE 607 (664)
Q Consensus 528 ~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 607 (664)
....||+.|||||++.+..++.++|||||||++|||++|+.||...+... ... .+.... ...+...
T Consensus 186 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~---~~~---------~i~~~~--~~~p~~~ 251 (340)
T PTZ00426 186 YTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLL---IYQ---------KILEGI--IYFPKFL 251 (340)
T ss_pred ceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHH---HHH---------HHhcCC--CCCCCCC
Confidence 22458899999999999889999999999999999999999986432211 110 011110 1122223
Q ss_pred HHHHHHHHHhcccccCCCCC-----CHHHHHHH
Q 040814 608 LLRCIHAGLLCVHDQAVNRP-----TMADVVSC 635 (664)
Q Consensus 608 ~~~l~~l~~~Cl~~dP~~RP-----t~~evl~~ 635 (664)
...+.+++.+|++.||++|+ +++++++.
T Consensus 252 ~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 252 DNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred CHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 34567788889999999995 88888754
No 58
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.95 E-value=1.4e-27 Score=248.01 Aligned_cols=210 Identities=24% Similarity=0.387 Sum_probs=164.2
Q ss_pred cCccccceeccCCCcCEEEEEEc------CCcEEEEEeccc----------------------ceEEEEeEeecCCeeEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL------DGQVIAVKRLSG----------------------RTIRLMGCSLHGAERIL 470 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~~~~----------------------~~v~l~g~~~~~~~~~l 470 (664)
++|.+.+.||+|+||.||++... ++..+|+|.+.. +++++++++..++..++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 56888899999999999999852 256789998742 36899999999999999
Q ss_pred EEeccCCCchhHHhhccc----------ccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-------------
Q 040814 471 VYEFMPNKSLDFFIFDSV----------KKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------- 527 (664)
Q Consensus 471 V~Ey~~~gsL~~~l~~~~----------~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------- 527 (664)
||||+++++|.+++.... +...+++..+..++.|++.||+|||+.+++|+|+++.|.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~df 164 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDF 164 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEeccC
Confidence 999999999999985321 123599999999999999999999999999999998771
Q ss_pred ---------------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCCh
Q 040814 528 ---------------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKA 591 (664)
Q Consensus 528 ---------------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 591 (664)
....++..|+|||++.+..++.++|||||||++|||++ |+.||......+. ... ...+..
T Consensus 165 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~---~~~-i~~~~~ 240 (288)
T cd05093 165 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV---IEC-ITQGRV 240 (288)
T ss_pred CccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH---HHH-HHcCCc
Confidence 01123567999999998899999999999999999999 8888754332111 100 111110
Q ss_pred hHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhcccc
Q 040814 592 SELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQ 641 (664)
Q Consensus 592 ~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~ 641 (664)
...+......+.+++.+||+.+|.+|||+.++++.|+++..
T Consensus 241 ---------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~ 281 (288)
T cd05093 241 ---------LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAK 281 (288)
T ss_pred ---------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 01112234568889999999999999999999999988764
No 59
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.95 E-value=1.2e-27 Score=246.98 Aligned_cols=207 Identities=25% Similarity=0.389 Sum_probs=162.7
Q ss_pred cCccccceeccCCCcCEEEEEEcC------CcEEEEEeccc-----------------------ceEEEEeEeecCCeeE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD------GQVIAVKRLSG-----------------------RTIRLMGCSLHGAERI 469 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~------~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~ 469 (664)
++|.+.+.||+|+||.||+|...+ ++.||||.+.. +++++++++..+...+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 457788999999999999998633 47899998753 3588999999999999
Q ss_pred EEEeccCCCchhHHhhccc-----------ccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-----------
Q 040814 470 LVYEFMPNKSLDFFIFDSV-----------KKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT----------- 527 (664)
Q Consensus 470 lV~Ey~~~gsL~~~l~~~~-----------~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~----------- 527 (664)
+||||+++++|.+++.... ....+++..+..++.||+.||.|||+.+++|+|+++.|.
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~ 164 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIG 164 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEEEC
Confidence 9999999999999996421 134588999999999999999999999999999888771
Q ss_pred -----------------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcC
Q 040814 528 -----------------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEG 589 (664)
Q Consensus 528 -----------------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 589 (664)
....+++.|+|||++.+..++.++|||||||++|||++ |+.||......+.. .. ...+
T Consensus 165 d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~---~~-~~~~ 240 (280)
T cd05049 165 DFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVI---EC-ITQG 240 (280)
T ss_pred CcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHH---HH-HHcC
Confidence 01123467999999999999999999999999999999 99998643322111 10 0111
Q ss_pred ChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhc
Q 040814 590 KASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQ 638 (664)
Q Consensus 590 ~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 638 (664)
.....+......+.+++.+||+.||++||++.||+++|++
T Consensus 241 ---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 241 ---------RLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred ---------CcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 1111222344567888999999999999999999999863
No 60
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.95 E-value=8.4e-28 Score=252.77 Aligned_cols=190 Identities=19% Similarity=0.222 Sum_probs=152.2
Q ss_pred eccCCCcCEEEEEEcC-CcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEEeccCCCch
Q 040814 427 LGEGGFGPVYKGKLLD-GQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVYEFMPNKSL 480 (664)
Q Consensus 427 lg~G~fg~Vy~~~~~~-~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~Ey~~~gsL 480 (664)
||+|+||.||++...+ ++.||+|++.+ +++++++++.+++..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 7999999999999854 88999998742 368899999999999999999999999
Q ss_pred hHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------ccccccC
Q 040814 481 DFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NRVVGTY 534 (664)
Q Consensus 481 ~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~~~Gt~ 534 (664)
.+++. +...+++..+..++.||++||.|||+.+++|+|+++.|. ....||+
T Consensus 81 ~~~l~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~ 157 (312)
T cd05585 81 FHHLQ---REGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTP 157 (312)
T ss_pred HHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCc
Confidence 99984 345799999999999999999999999999999998771 1235899
Q ss_pred CccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhC--CCCCHHHHHHHH
Q 040814 535 GYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALD--GPCPENELLRCI 612 (664)
Q Consensus 535 ~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~l~ 612 (664)
.|+|||++.+..++.++|||||||++|||++|+.||...... +....... ...+......+.
T Consensus 158 ~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ 221 (312)
T cd05585 158 EYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVN----------------EMYRKILQEPLRFPDGFDRDAK 221 (312)
T ss_pred ccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHH----------------HHHHHHHcCCCCCCCcCCHHHH
Confidence 999999999999999999999999999999999998643211 11111111 122333445677
Q ss_pred HHHHhcccccCCCCCCHHHHHHH
Q 040814 613 HAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 613 ~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
+++.+||+.||++||++.++.+.
T Consensus 222 ~li~~~L~~dp~~R~~~~~~~e~ 244 (312)
T cd05585 222 DLLIGLLSRDPTRRLGYNGAQEI 244 (312)
T ss_pred HHHHHHcCCCHHHcCCCCCHHHH
Confidence 88889999999999864333333
No 61
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.95 E-value=2.6e-27 Score=242.94 Aligned_cols=207 Identities=23% Similarity=0.388 Sum_probs=163.5
Q ss_pred hcCccccceeccCCCcCEEEEEEcC-C---cEEEEEeccc-----------------------ceEEEEeEeecCCeeEE
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLLD-G---QVIAVKRLSG-----------------------RTIRLMGCSLHGAERIL 470 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~~-~---~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~l 470 (664)
.++|+..+.||+|+||.||+|..+. + ..+|+|++.. +++++.+++...+..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 4577888999999999999999753 3 3799998753 26889999999999999
Q ss_pred EEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc----------------------
Q 040814 471 VYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN---------------------- 528 (664)
Q Consensus 471 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~---------------------- 528 (664)
||||+++++|..++.. +...+++..+..++.|++.||.|||+.+++|+|+++.|.-
T Consensus 84 v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 161 (268)
T cd05063 84 ITEYMENGALDKYLRD--HDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDP 161 (268)
T ss_pred EEEcCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceeccccc
Confidence 9999999999999853 2357999999999999999999999999999999988710
Q ss_pred -------cccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhC
Q 040814 529 -------RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALD 600 (664)
Q Consensus 529 -------~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 600 (664)
....+..|+|||++.+..++.++|||||||++|||++ |+.||......+ ... .+.....
T Consensus 162 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~---~~~----------~i~~~~~ 228 (268)
T cd05063 162 EGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHE---VMK----------AINDGFR 228 (268)
T ss_pred ccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHH---HHH----------HHhcCCC
Confidence 0011236999999998889999999999999999998 999985433211 111 1111111
Q ss_pred CCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhcc
Q 040814 601 GPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQN 639 (664)
Q Consensus 601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 639 (664)
.+.+.+....+.+++.+||+.+|++||++.+|++.|+++
T Consensus 229 ~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 229 LPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 122233456688999999999999999999999999875
No 62
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.95 E-value=2.5e-27 Score=245.32 Aligned_cols=207 Identities=26% Similarity=0.414 Sum_probs=161.6
Q ss_pred cCccccceeccCCCcCEEEEEE-----cCCcEEEEEeccc-----------------------ceEEEEeEeecCCeeEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKL-----LDGQVIAVKRLSG-----------------------RTIRLMGCSLHGAERIL 470 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~-----~~~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~l 470 (664)
++|++.+.||+|+||.||+|.. .+++.||+|.+.. +++++++++..+...++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 4577789999999999999985 2467899998852 36899999999999999
Q ss_pred EEeccCCCchhHHhhccc--------------ccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc---------
Q 040814 471 VYEFMPNKSLDFFIFDSV--------------KKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------- 527 (664)
Q Consensus 471 V~Ey~~~gsL~~~l~~~~--------------~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------- 527 (664)
||||+++++|.+++.... ....+++.....++.|++.||.|||+.+++|+|+++.|.
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~k 164 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVK 164 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcEE
Confidence 999999999999985321 123588999999999999999999999999999998871
Q ss_pred -------------------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHh
Q 040814 528 -------------------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWK 587 (664)
Q Consensus 528 -------------------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~ 587 (664)
....++..|+|||++.+..++.++|||||||++|||++ |..||.........
T Consensus 165 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~-------- 236 (283)
T cd05090 165 ISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVI-------- 236 (283)
T ss_pred eccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHH--------
Confidence 01123456999999998889999999999999999999 88887543211111
Q ss_pred cCChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhc
Q 040814 588 EGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQ 638 (664)
Q Consensus 588 ~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 638 (664)
+.++.......+.....++.+++.+||+.+|++||++.+|+++|..
T Consensus 237 -----~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 237 -----EMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred -----HHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 1111111112223344567888899999999999999999998864
No 63
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.95 E-value=1.9e-27 Score=242.35 Aligned_cols=202 Identities=22% Similarity=0.301 Sum_probs=161.0
Q ss_pred CccccceeccCCCcCEEEEEEcCCcEEEEEeccc---------------------ceEEEEeEeecCCeeEEEEeccCCC
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLLDGQVIAVKRLSG---------------------RTIRLMGCSLHGAERILVYEFMPNK 478 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~---------------------~~v~l~g~~~~~~~~~lV~Ey~~~g 478 (664)
+|++.+.||+|+||.||+|..++++.+|+|.+.+ +++++++++...+..++||||++++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANG 84 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCC
Confidence 4677899999999999999987778899998753 2688999999989999999999999
Q ss_pred chhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc---------------------------ccc
Q 040814 479 SLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN---------------------------RVV 531 (664)
Q Consensus 479 sL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~---------------------------~~~ 531 (664)
+|.+++... ...+++..+..|+.||+.||+|||+.+++|+|+++.|.- ...
T Consensus 85 ~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 162 (256)
T cd05059 85 CLLNYLRER--KGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTK 162 (256)
T ss_pred CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccccccCCCC
Confidence 999998532 347899999999999999999999999999999887710 001
Q ss_pred ccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHH
Q 040814 532 GTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLR 610 (664)
Q Consensus 532 Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 610 (664)
++..|+|||.+.+..++.++||||||+++|||++ |+.||......+.. . .+........+......
T Consensus 163 ~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~---~----------~~~~~~~~~~~~~~~~~ 229 (256)
T cd05059 163 FPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVV---E----------SVSAGYRLYRPKLAPTE 229 (256)
T ss_pred CCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHH---H----------HHHcCCcCCCCCCCCHH
Confidence 2246999999998899999999999999999999 78888643322111 0 01111111222334557
Q ss_pred HHHHHHhcccccCCCCCCHHHHHHHH
Q 040814 611 CIHAGLLCVHDQAVNRPTMADVVSCL 636 (664)
Q Consensus 611 l~~l~~~Cl~~dP~~RPt~~evl~~L 636 (664)
+.+++.+||+.+|++|||+.|+++.|
T Consensus 230 ~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 230 VYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred HHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 88899999999999999999999987
No 64
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.95 E-value=1.4e-27 Score=248.34 Aligned_cols=212 Identities=24% Similarity=0.341 Sum_probs=166.7
Q ss_pred HHhcCccccceeccCCCcCEEEEEEcC------CcEEEEEeccc------------------------ceEEEEeEeecC
Q 040814 416 AATNNFSTTNKLGEGGFGPVYKGKLLD------GQVIAVKRLSG------------------------RTIRLMGCSLHG 465 (664)
Q Consensus 416 ~~t~~~~~~~~lg~G~fg~Vy~~~~~~------~~~vavK~~~~------------------------~~v~l~g~~~~~ 465 (664)
...++|+..+.||+|+||.||++.... ...+|+|.+.. +++++++++..+
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 345678888999999999999998642 36899997743 368999999999
Q ss_pred CeeEEEEeccCCCchhHHhhcc-------------cccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-----
Q 040814 466 AERILVYEFMPNKSLDFFIFDS-------------VKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT----- 527 (664)
Q Consensus 466 ~~~~lV~Ey~~~gsL~~~l~~~-------------~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~----- 527 (664)
...+++|||+++|+|..++... .....+++..++.++.||+.||.|||+.+++|+|+++.|.
T Consensus 89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~ 168 (293)
T cd05053 89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTED 168 (293)
T ss_pred CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCC
Confidence 9999999999999999998642 1235789999999999999999999999999999998871
Q ss_pred -----------------------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhh
Q 040814 528 -----------------------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVG 583 (664)
Q Consensus 528 -----------------------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~ 583 (664)
....++..|+|||.+.+..++.++|||||||++|||++ |..|+......+..
T Consensus 169 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~---- 244 (293)
T cd05053 169 HVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELF---- 244 (293)
T ss_pred CeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHH----
Confidence 00123457999999998899999999999999999998 88887543211111
Q ss_pred hHHhcCChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhccc
Q 040814 584 YLWKEGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNN 640 (664)
Q Consensus 584 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 640 (664)
+.+........+......+.+++.+||+.+|++|||+.|+++.|+.+.
T Consensus 245 ---------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 245 ---------KLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred ---------HHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 111111111233344567888999999999999999999999998764
No 65
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.95 E-value=3.9e-27 Score=241.36 Aligned_cols=211 Identities=21% Similarity=0.271 Sum_probs=165.9
Q ss_pred cCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVY 472 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~ 472 (664)
++|++.+.||+|+||.||+|+.. +++.||||.+.. +++++++++...+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 57888999999999999999975 589999997632 3688999999889999999
Q ss_pred eccCCCchhHHhhccc-ccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc------------------------
Q 040814 473 EFMPNKSLDFFIFDSV-KKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------------ 527 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------------ 527 (664)
||+++|+|.+++.... +...+++..+..++.||++||.|||+.+.+|.|+++.|.
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~ 161 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhH
Confidence 9999999999885432 234689999999999999999999999999999887761
Q ss_pred --ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCC-C
Q 040814 528 --NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPC-P 604 (664)
Q Consensus 528 --~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~ 604 (664)
....|+..|+|||.+.+..++.++||||||+++|||++|+.|+...... ...... .+......+. .
T Consensus 162 ~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~-~~~~~~----------~~~~~~~~~~~~ 230 (267)
T cd08228 162 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LFSLCQ----------KIEQCDYPPLPT 230 (267)
T ss_pred HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccccc-HHHHHH----------HHhcCCCCCCCh
Confidence 1235778899999999888999999999999999999999998532211 111110 0111001111 1
Q ss_pred HHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhccc
Q 040814 605 ENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNN 640 (664)
Q Consensus 605 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 640 (664)
......+.+++.+||+.+|++||++.+|++.|+++.
T Consensus 231 ~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 231 EHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred hhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 234456788889999999999999999999998763
No 66
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.95 E-value=2.4e-27 Score=245.11 Aligned_cols=206 Identities=23% Similarity=0.304 Sum_probs=159.0
Q ss_pred cCccccceeccCCCcCEEEEEEc-CCc----EEEEEeccc-----------------------ceEEEEeEeecCCeeEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-DGQ----VIAVKRLSG-----------------------RTIRLMGCSLHGAERIL 470 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~----~vavK~~~~-----------------------~~v~l~g~~~~~~~~~l 470 (664)
++|++.+.||+|+||.||+|... +++ .+++|.+.. +++++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence 46777899999999999999974 344 478887742 36889998754 45789
Q ss_pred EEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-----------------------
Q 040814 471 VYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT----------------------- 527 (664)
Q Consensus 471 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~----------------------- 527 (664)
++||+++|+|.+++.. ....+++..+..|+.||+.||.|||+.+.+|+|+++.|.
T Consensus 86 i~e~~~~gsL~~~l~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~ 163 (279)
T cd05111 86 VTQLSPLGSLLDHVRQ--HRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDD 163 (279)
T ss_pred EEEeCCCCcHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCCC
Confidence 9999999999999953 245799999999999999999999999999999998871
Q ss_pred -----ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCC
Q 040814 528 -----NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDG 601 (664)
Q Consensus 528 -----~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 601 (664)
....++..|+|||++.+..++.++|||||||++|||++ |+.||......... .....+. ..
T Consensus 164 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~----~~~~~~~---------~~ 230 (279)
T cd05111 164 KKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVP----DLLEKGE---------RL 230 (279)
T ss_pred cccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHH----HHHHCCC---------cC
Confidence 01234568999999998899999999999999999998 99998643221111 1111111 11
Q ss_pred CCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhccc
Q 040814 602 PCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNN 640 (664)
Q Consensus 602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 640 (664)
..+......+.+++.+||+.+|++|||+.|+++.|+.+.
T Consensus 231 ~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~ 269 (279)
T cd05111 231 AQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMA 269 (279)
T ss_pred CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 111223345677888999999999999999999998876
No 67
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.95 E-value=2.6e-27 Score=246.01 Aligned_cols=214 Identities=19% Similarity=0.265 Sum_probs=156.8
Q ss_pred cCccccceeccCCCcCEEEEEEc--CCcEEEEEecc---------------------------cceEEEEeEee-----c
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL--DGQVIAVKRLS---------------------------GRTIRLMGCSL-----H 464 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~--~~~~vavK~~~---------------------------~~~v~l~g~~~-----~ 464 (664)
++|++.+.||+|+||.||+|+.. +++.||+|+++ +++++++++|. .
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 46888999999999999999873 36889999763 24688888875 2
Q ss_pred CCeeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-----------------
Q 040814 465 GAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT----------------- 527 (664)
Q Consensus 465 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~----------------- 527 (664)
....++||||++ ++|.+++... ....+++..+..|+.||+.||.|||+.+++|+|+++.|.
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~ 158 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKV-PEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 158 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceE
Confidence 456899999997 5898888542 234689999999999999999999999999999998871
Q ss_pred --------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcC---ChhH---
Q 040814 528 --------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEG---KASE--- 593 (664)
Q Consensus 528 --------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~---~~~~--- 593 (664)
....||+.|+|||.+.+..++.++|||||||++|||++|++||......+....+....... ....
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 238 (290)
T cd07862 159 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 238 (290)
T ss_pred eccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhc
Confidence 12357889999999998899999999999999999999999997654332221111000000 0000
Q ss_pred hhhhhhC--CCCC-----HHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 594 LMEAALD--GPCP-----ENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 594 ~~d~~~~--~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
+...... ...+ ......+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 239 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred ccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 0000000 0000 112345678899999999999999999985
No 68
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.95 E-value=7.8e-28 Score=254.27 Aligned_cols=193 Identities=19% Similarity=0.200 Sum_probs=155.7
Q ss_pred ceeccCCCcCEEEEEEc-CCcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEEeccCCC
Q 040814 425 NKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVYEFMPNK 478 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~Ey~~~g 478 (664)
+.||+|+||.||+++.+ +|+.||||++.+ +++++++++..++..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999975 589999998753 2578889999999999999999999
Q ss_pred chhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------ccccc
Q 040814 479 SLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NRVVG 532 (664)
Q Consensus 479 sL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~~~G 532 (664)
+|..++. +...+++..+..++.||+.||+|||+.+++|+|+++.|. ...+|
T Consensus 81 ~L~~~l~---~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~g 157 (323)
T cd05571 81 ELFFHLS---RERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG 157 (323)
T ss_pred cHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceec
Confidence 9999984 346789999999999999999999999999999998771 12358
Q ss_pred cCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHH
Q 040814 533 TYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRCI 612 (664)
Q Consensus 533 t~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~ 612 (664)
|+.|||||++.+..++.++|||||||++|||++|+.||...+..... ... ... ....+......+.
T Consensus 158 t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~---~~~---------~~~--~~~~p~~~~~~~~ 223 (323)
T cd05571 158 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF---ELI---------LME--EIRFPRTLSPEAK 223 (323)
T ss_pred CccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHH---HHH---------HcC--CCCCCCCCCHHHH
Confidence 99999999999999999999999999999999999998643211111 000 000 1122333445677
Q ss_pred HHHHhcccccCCCCC-----CHHHHHH
Q 040814 613 HAGLLCVHDQAVNRP-----TMADVVS 634 (664)
Q Consensus 613 ~l~~~Cl~~dP~~RP-----t~~evl~ 634 (664)
+++.+||+.||++|| ++.++++
T Consensus 224 ~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 224 SLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred HHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 888899999999999 7888874
No 69
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.95 E-value=2.8e-27 Score=241.68 Aligned_cols=206 Identities=27% Similarity=0.386 Sum_probs=162.9
Q ss_pred hcCccccceeccCCCcCEEEEEEcCCcEEEEEeccc---------------------ceEEEEeEeecCCeeEEEEeccC
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLLDGQVIAVKRLSG---------------------RTIRLMGCSLHGAERILVYEFMP 476 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~---------------------~~v~l~g~~~~~~~~~lV~Ey~~ 476 (664)
.++|++.++||+|+||.||+|..++++.||+|.+.. +++++++++ ..+..+++|||++
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e~~~ 83 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEYME 83 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEEcCC
Confidence 457888999999999999999988899999998864 257777776 4567899999999
Q ss_pred CCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc---------------------------cc
Q 040814 477 NKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT---------------------------NR 529 (664)
Q Consensus 477 ~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~---------------------------~~ 529 (664)
+++|.+++... ....+++.++..++.|++.||+|||+.+.+|+|+++.|. ..
T Consensus 84 ~~~L~~~~~~~-~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~ 162 (260)
T cd05067 84 NGSLVDFLKTP-EGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREG 162 (260)
T ss_pred CCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccC
Confidence 99999998542 345789999999999999999999999999999988761 01
Q ss_pred ccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHH
Q 040814 530 VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENEL 608 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 608 (664)
..++..|+|||++....++.++||||||+++|||++ |+.||......+. .. .+......+.+....
T Consensus 163 ~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~---~~----------~~~~~~~~~~~~~~~ 229 (260)
T cd05067 163 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEV---IQ----------NLERGYRMPRPDNCP 229 (260)
T ss_pred CcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHH---HH----------HHHcCCCCCCCCCCC
Confidence 123467999999998889999999999999999999 9999864332111 10 111111112223334
Q ss_pred HHHHHHHHhcccccCCCCCCHHHHHHHHhc
Q 040814 609 LRCIHAGLLCVHDQAVNRPTMADVVSCLRQ 638 (664)
Q Consensus 609 ~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 638 (664)
.++.+++.+||+.+|++|||++++++.|+.
T Consensus 230 ~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 230 EELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred HHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 568888999999999999999999999875
No 70
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.95 E-value=1.9e-27 Score=251.41 Aligned_cols=196 Identities=21% Similarity=0.287 Sum_probs=156.5
Q ss_pred ccccceeccCCCcCEEEEEEc-CCcEEEEEeccc----------------------------ceEEEEeEeecCCeeEEE
Q 040814 421 FSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG----------------------------RTIRLMGCSLHGAERILV 471 (664)
Q Consensus 421 ~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~----------------------------~~v~l~g~~~~~~~~~lV 471 (664)
|++.+.||+|+||.||+|... +++.||||++++ +++++++++..++..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 567899999999999999975 489999998742 357899999999999999
Q ss_pred EeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc------------------------
Q 040814 472 YEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------------ 527 (664)
Q Consensus 472 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------------ 527 (664)
|||+++|+|..++. ...+++..+..++.||+.||.|||+.+++|+|+++.|.
T Consensus 81 ~E~~~~~~L~~~~~----~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~ 156 (324)
T cd05589 81 MEYAAGGDLMMHIH----TDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGD 156 (324)
T ss_pred EcCCCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCC
Confidence 99999999998873 35799999999999999999999999999999888761
Q ss_pred --ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCH
Q 040814 528 --NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPE 605 (664)
Q Consensus 528 --~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 605 (664)
....||+.|||||.+.+..++.++|||||||++|||++|+.||......+.. . .+... ....+.
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~---~---------~i~~~--~~~~p~ 222 (324)
T cd05589 157 RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVF---D---------SIVND--EVRYPR 222 (324)
T ss_pred cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHH---H---------HHHhC--CCCCCC
Confidence 1235889999999999999999999999999999999999998643321111 0 01100 111223
Q ss_pred HHHHHHHHHHHhcccccCCCCC-----CHHHHHH
Q 040814 606 NELLRCIHAGLLCVHDQAVNRP-----TMADVVS 634 (664)
Q Consensus 606 ~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~ 634 (664)
.....+.+++.+||+.||.+|| ++.++++
T Consensus 223 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 223 FLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 3345577888899999999999 4666554
No 71
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.95 E-value=1.1e-27 Score=252.21 Aligned_cols=192 Identities=23% Similarity=0.273 Sum_probs=153.2
Q ss_pred ceeccCCCcCEEEEEEcC-CcEEEEEeccc--------------------------ceEEEEeEeecCCeeEEEEeccCC
Q 040814 425 NKLGEGGFGPVYKGKLLD-GQVIAVKRLSG--------------------------RTIRLMGCSLHGAERILVYEFMPN 477 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~--------------------------~~v~l~g~~~~~~~~~lV~Ey~~~ 477 (664)
+.||+|+||.||+|+..+ ++.||||++++ +++++++++.+++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 469999999999999854 78999997742 368899999999999999999999
Q ss_pred CchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------cccc
Q 040814 478 KSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NRVV 531 (664)
Q Consensus 478 gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~~~ 531 (664)
|+|..++. ....+++..+..++.||++||.|||+.+++|+|+++.|. ....
T Consensus 81 g~L~~~l~---~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (316)
T cd05619 81 GDLMFHIQ---SCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFC 157 (316)
T ss_pred CcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeec
Confidence 99999984 345789999999999999999999999999999888771 1234
Q ss_pred ccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHH
Q 040814 532 GTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRC 611 (664)
Q Consensus 532 Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l 611 (664)
||+.|+|||++.+..++.++|||||||++|||++|+.||......+.. ... .. .....+......+
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~---~~i----------~~-~~~~~~~~~~~~~ 223 (316)
T cd05619 158 GTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELF---QSI----------RM-DNPCYPRWLTREA 223 (316)
T ss_pred CCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHH---HHH----------Hh-CCCCCCccCCHHH
Confidence 788999999999999999999999999999999999998643321111 000 00 0111222233456
Q ss_pred HHHHHhcccccCCCCCCHH-HHH
Q 040814 612 IHAGLLCVHDQAVNRPTMA-DVV 633 (664)
Q Consensus 612 ~~l~~~Cl~~dP~~RPt~~-evl 633 (664)
.+++.+||+.||++||++. ++.
T Consensus 224 ~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 224 KDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred HHHHHHHhccCHhhcCCChHHHH
Confidence 7888899999999999997 554
No 72
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=9.3e-28 Score=227.42 Aligned_cols=202 Identities=21% Similarity=0.293 Sum_probs=169.8
Q ss_pred hcCccccceeccCCCcCEEEEEEcC-CcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEE
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILV 471 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV 471 (664)
.++|++.+.||+|.||.||.|+.+. +-.||+|++.+ |++++++++.+....+|+
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 4578889999999999999999755 78999999853 468899999999999999
Q ss_pred EeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc------------------------c
Q 040814 472 YEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN------------------------T 527 (664)
Q Consensus 472 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n------------------------~ 527 (664)
+||.++|+|...|.+. ....+++.....++.|+|.||.|+|..+.+|+|++|+| .
T Consensus 101 lEya~~gel~k~L~~~-~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR 179 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEG-RMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSNKR 179 (281)
T ss_pred EEecCCchHHHHHHhc-ccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecCCCCc
Confidence 9999999999999653 45679999999999999999999999999999999988 2
Q ss_pred ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHH
Q 040814 528 NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENE 607 (664)
Q Consensus 528 ~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 607 (664)
...+||..|.+||...+...+.++|+|++|++.||++.|.+||......+.. .++... +-.+|...
T Consensus 180 ~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etY------------krI~k~--~~~~p~~i 245 (281)
T KOG0580|consen 180 KTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETY------------KRIRKV--DLKFPSTI 245 (281)
T ss_pred eeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHH------------HHHHHc--cccCCccc
Confidence 4568999999999999999999999999999999999999999755422221 111111 12334455
Q ss_pred HHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 608 LLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 608 ~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
...+.+++.+|+..+|.+|.+..|++.
T Consensus 246 s~~a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 246 SGGAADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred ChhHHHHHHHHhccCccccccHHHHhh
Confidence 566778888999999999999999875
No 73
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.95 E-value=2.5e-27 Score=241.74 Aligned_cols=196 Identities=27% Similarity=0.353 Sum_probs=154.4
Q ss_pred eeccCCCcCEEEEEE---cCCcEEEEEeccc------------------------ceEEEEeEeecCCeeEEEEeccCCC
Q 040814 426 KLGEGGFGPVYKGKL---LDGQVIAVKRLSG------------------------RTIRLMGCSLHGAERILVYEFMPNK 478 (664)
Q Consensus 426 ~lg~G~fg~Vy~~~~---~~~~~vavK~~~~------------------------~~v~l~g~~~~~~~~~lV~Ey~~~g 478 (664)
+||+|+||.||+|.+ ++++.+|+|+++. +++++++++. ++..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 689999999999975 3478999998742 2578888875 45678999999999
Q ss_pred chhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-----------------------------cc
Q 040814 479 SLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-----------------------------NR 529 (664)
Q Consensus 479 sL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-----------------------------~~ 529 (664)
+|.+++. ....+++..+.+++.|++.||.|||+.+++|+|+++.|. ..
T Consensus 81 ~L~~~l~---~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 157 (257)
T cd05116 81 PLNKFLQ---KNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTH 157 (257)
T ss_pred cHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCC
Confidence 9999984 345799999999999999999999999999999998871 00
Q ss_pred ccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHH
Q 040814 530 VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENEL 608 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 608 (664)
..++..|+|||.+....++.++|||||||++|||++ |+.||......+.. +.++.....+.+....
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~-------------~~i~~~~~~~~~~~~~ 224 (257)
T cd05116 158 GKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVT-------------QMIESGERMECPQRCP 224 (257)
T ss_pred CCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH-------------HHHHCCCCCCCCCCCC
Confidence 112368999999988889999999999999999998 99998643221111 1111111222333445
Q ss_pred HHHHHHHHhcccccCCCCCCHHHHHHHHhc
Q 040814 609 LRCIHAGLLCVHDQAVNRPTMADVVSCLRQ 638 (664)
Q Consensus 609 ~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 638 (664)
..+.+++.+||+.||++||++++|.++|++
T Consensus 225 ~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 225 PEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred HHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 667889999999999999999999999976
No 74
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.95 E-value=1.9e-27 Score=257.83 Aligned_cols=212 Identities=19% Similarity=0.287 Sum_probs=164.3
Q ss_pred HhcCccccceeccCCCcCEEEEEEc------CCcEEEEEeccc------------------------ceEEEEeEeecCC
Q 040814 417 ATNNFSTTNKLGEGGFGPVYKGKLL------DGQVIAVKRLSG------------------------RTIRLMGCSLHGA 466 (664)
Q Consensus 417 ~t~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~~~~------------------------~~v~l~g~~~~~~ 466 (664)
..++|.+.++||+|+||.||+|++. .++.||||+++. ++++++++|....
T Consensus 35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~ 114 (401)
T cd05107 35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG 114 (401)
T ss_pred cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC
Confidence 3456777899999999999999863 246899998852 3789999999999
Q ss_pred eeEEEEeccCCCchhHHhhcccc---------------------------------------------------------
Q 040814 467 ERILVYEFMPNKSLDFFIFDSVK--------------------------------------------------------- 489 (664)
Q Consensus 467 ~~~lV~Ey~~~gsL~~~l~~~~~--------------------------------------------------------- 489 (664)
..++|||||++|+|.++++....
T Consensus 115 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (401)
T cd05107 115 PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQD 194 (401)
T ss_pred CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhc
Confidence 99999999999999999964311
Q ss_pred --------------------------------------cCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc----
Q 040814 490 --------------------------------------KKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT---- 527 (664)
Q Consensus 490 --------------------------------------~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~---- 527 (664)
...+++..+..|+.||+.||.|||+.+++|+|+++.|.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~ 274 (401)
T cd05107 195 MKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICE 274 (401)
T ss_pred chhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeC
Confidence 12478888999999999999999999999999998771
Q ss_pred ------------------------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhh
Q 040814 528 ------------------------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLV 582 (664)
Q Consensus 528 ------------------------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~ 582 (664)
....++..|||||.+.+..++.++|||||||++|||++ |+.||......+. .
T Consensus 275 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~---~ 351 (401)
T cd05107 275 GKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQ---F 351 (401)
T ss_pred CCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHH---H
Confidence 01234567999999998889999999999999999998 8888754321111 0
Q ss_pred hhHHhcCChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhccc
Q 040814 583 GYLWKEGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNN 640 (664)
Q Consensus 583 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 640 (664)
...+........+......+.+++.+||+.+|++||++++|++.|+++.
T Consensus 352 ---------~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 352 ---------YNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred ---------HHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 0111111111223334456788888999999999999999999998764
No 75
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.95 E-value=6.4e-27 Score=239.51 Aligned_cols=211 Identities=22% Similarity=0.300 Sum_probs=167.1
Q ss_pred cCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVY 472 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~ 472 (664)
++|++.+.||+|+||.||+|... +++.||+|.++. +++++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 67899999999999999999986 689999997742 2688899999999999999
Q ss_pred eccCCCchhHHhhccc-ccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc------------------------
Q 040814 473 EFMPNKSLDFFIFDSV-KKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------------ 527 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------------ 527 (664)
||+++++|..++.+.. ....+++..+..++.++++||.|||+.+++|.|+++.|.
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~ 161 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCc
Confidence 9999999999985432 245689999999999999999999999999999888771
Q ss_pred --ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCH
Q 040814 528 --NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPE 605 (664)
Q Consensus 528 --~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 605 (664)
....++..|+|||.+.+..++.++|||||||++|||++|+.||...... ....... .......+.+.
T Consensus 162 ~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~----------~~~~~~~~~~~ 230 (267)
T cd08224 162 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LYSLCKK----------IEKCDYPPLPA 230 (267)
T ss_pred ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCcc-HHHHHhh----------hhcCCCCCCCh
Confidence 1134777899999999888999999999999999999999998533211 0001100 00011112222
Q ss_pred -HHHHHHHHHHHhcccccCCCCCCHHHHHHHHhccc
Q 040814 606 -NELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNN 640 (664)
Q Consensus 606 -~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 640 (664)
.....+.+++.+||+.+|++|||+.+|+++|+++.
T Consensus 231 ~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 231 DHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred hhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 33456778889999999999999999999998764
No 76
>PTZ00284 protein kinase; Provisional
Probab=99.95 E-value=2.3e-27 Score=263.30 Aligned_cols=218 Identities=19% Similarity=0.171 Sum_probs=161.7
Q ss_pred HHHHHhcCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc---------------------------ceEEEEeEeec
Q 040814 413 TIAAATNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG---------------------------RTIRLMGCSLH 464 (664)
Q Consensus 413 ~i~~~t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~---------------------------~~v~l~g~~~~ 464 (664)
++...+++|++.++||+|+||.||+|... .++.||||+++. +++++++++..
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 34456789999999999999999999975 488999998842 14667777765
Q ss_pred C-CeeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhh-cCcccccccccccc--------------
Q 040814 465 G-AERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK-YSRLRMNESKVNTN-------------- 528 (664)
Q Consensus 465 ~-~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~-~~~~h~d~~~~n~~-------------- 528 (664)
+ .+.++|||++ +++|.+++. +...+++..+..|+.||+.||.|||+ .+++|+|+++.|.-
T Consensus 203 ~~~~~~iv~~~~-g~~l~~~l~---~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~ 278 (467)
T PTZ00284 203 ETGHMCIVMPKY-GPCLLDWIM---KHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNR 278 (467)
T ss_pred CCceEEEEEecc-CCCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCccccccccc
Confidence 4 5688999988 678888884 34679999999999999999999998 59999999988721
Q ss_pred -------------------------cccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhh
Q 040814 529 -------------------------RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVG 583 (664)
Q Consensus 529 -------------------------~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~ 583 (664)
..+||+.|||||++.+..++.++|||||||++|||++|+.||...+..+....+.
T Consensus 279 ~~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~ 358 (467)
T PTZ00284 279 ALPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLME 358 (467)
T ss_pred ccCCCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence 1357899999999999999999999999999999999999997655433332221
Q ss_pred hHHh-------c----CChhHhhhhhh--CCCC------------C---HHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 584 YLWK-------E----GKASELMEAAL--DGPC------------P---ENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 584 ~~~~-------~----~~~~~~~d~~~--~~~~------------~---~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
.... . ....++.+... .... + ......+++++.+||+.||++|||++|+++
T Consensus 359 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~ 437 (467)
T PTZ00284 359 KTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTT 437 (467)
T ss_pred HHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence 1100 0 00001111000 0000 0 011245678999999999999999999986
No 77
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.95 E-value=4.1e-27 Score=243.54 Aligned_cols=197 Identities=22% Similarity=0.272 Sum_probs=154.7
Q ss_pred eccCCCcCEEEEEEc-CCcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEEeccCCCch
Q 040814 427 LGEGGFGPVYKGKLL-DGQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVYEFMPNKSL 480 (664)
Q Consensus 427 lg~G~fg~Vy~~~~~-~~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~Ey~~~gsL 480 (664)
||+|+||+||++... +++.||+|++.+ +++++.+++..+...++|||||++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999975 589999998742 257888888888899999999999999
Q ss_pred hHHhhccc-ccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------cccccc
Q 040814 481 DFFIFDSV-KKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NRVVGT 533 (664)
Q Consensus 481 ~~~l~~~~-~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~~~Gt 533 (664)
..++.... ....+++..+..++.||+.||.|||+.+++|+|+++.|. ....||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~ 160 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGT 160 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCCC
Confidence 98885432 245799999999999999999999999999999888761 113578
Q ss_pred CCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhC--CCCCHHHHHHH
Q 040814 534 YGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALD--GPCPENELLRC 611 (664)
Q Consensus 534 ~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~l 611 (664)
+.|+|||++.+..++.++|||||||++|||++|+.||......... .++...... ...+......+
T Consensus 161 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~ 228 (280)
T cd05608 161 PGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN------------KELKQRILNDSVTYPDKFSPAS 228 (280)
T ss_pred cCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhH------------HHHHHhhcccCCCCcccCCHHH
Confidence 8999999999999999999999999999999999998653322111 011111111 12233345567
Q ss_pred HHHHHhcccccCCCCC-----CHHHHHHH
Q 040814 612 IHAGLLCVHDQAVNRP-----TMADVVSC 635 (664)
Q Consensus 612 ~~l~~~Cl~~dP~~RP-----t~~evl~~ 635 (664)
.+++.+||+.||++|| +++++++.
T Consensus 229 ~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 229 KSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred HHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 7888899999999999 67777753
No 78
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.95 E-value=2.5e-27 Score=247.20 Aligned_cols=210 Identities=24% Similarity=0.290 Sum_probs=162.6
Q ss_pred cCccccceeccCCCcCEEEEEEcC-Cc--EEEEEeccc------------------------ceEEEEeEeecCCeeEEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD-GQ--VIAVKRLSG------------------------RTIRLMGCSLHGAERILV 471 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~--~vavK~~~~------------------------~~v~l~g~~~~~~~~~lV 471 (664)
++|++.+.||+|+||.||+|..++ +. .+++|.++. +++++++++......++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 578889999999999999998754 33 468887642 357889999888889999
Q ss_pred EeccCCCchhHHhhccc-------------ccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc----------
Q 040814 472 YEFMPNKSLDFFIFDSV-------------KKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN---------- 528 (664)
Q Consensus 472 ~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~---------- 528 (664)
+||+++++|.+++.... ....+++..+..|+.||+.||+|||+.+++|+|+++.|.-
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~ 161 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIA 161 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEEC
Confidence 99999999999996421 1135889999999999999999999999999999988710
Q ss_pred -------------c--ccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChh
Q 040814 529 -------------R--VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKAS 592 (664)
Q Consensus 529 -------------~--~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 592 (664)
. ...+..|+|||++....++.++|||||||++|||++ |..||......+ ...
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~---~~~--------- 229 (297)
T cd05089 162 DFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE---LYE--------- 229 (297)
T ss_pred CcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH---HHH---------
Confidence 0 112346999999998889999999999999999998 999985432211 110
Q ss_pred HhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhcccc
Q 040814 593 ELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQ 641 (664)
Q Consensus 593 ~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~ 641 (664)
..........+......+.+++.+||+.+|.+|||++++++.|+.+..
T Consensus 230 -~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~ 277 (297)
T cd05089 230 -KLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLE 277 (297)
T ss_pred -HHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 111111112223344567888999999999999999999999988763
No 79
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.95 E-value=2e-27 Score=250.28 Aligned_cols=207 Identities=24% Similarity=0.365 Sum_probs=160.6
Q ss_pred cCccccceeccCCCcCEEEEEEcC-Cc----EEEEEeccc-----------------------ceEEEEeEeecCCeeEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD-GQ----VIAVKRLSG-----------------------RTIRLMGCSLHGAERIL 470 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~----~vavK~~~~-----------------------~~v~l~g~~~~~~~~~l 470 (664)
.+|+..+.||+|+||.||+|.+.. ++ .||+|+++. ++++++|+|... ...+
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 468889999999999999998643 33 489998742 368999998765 5779
Q ss_pred EEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-----------------------
Q 040814 471 VYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT----------------------- 527 (664)
Q Consensus 471 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~----------------------- 527 (664)
|+||+++|+|.+++... ...+++..+++++.||++||+|||+.+++|+|+++.|.
T Consensus 86 v~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 163 (316)
T cd05108 86 ITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADE 163 (316)
T ss_pred eeecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccCCC
Confidence 99999999999999542 34689999999999999999999999999999999881
Q ss_pred -----ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCC
Q 040814 528 -----NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDG 601 (664)
Q Consensus 528 -----~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 601 (664)
....++..|+|||.+.+..++.++|||||||++|||++ |+.|+......+ . ..++......
T Consensus 164 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~---~----------~~~~~~~~~~ 230 (316)
T cd05108 164 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---I----------SSILEKGERL 230 (316)
T ss_pred cceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH---H----------HHHHhCCCCC
Confidence 00112457999999999999999999999999999998 999986432111 0 1111111111
Q ss_pred CCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhcccc
Q 040814 602 PCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQ 641 (664)
Q Consensus 602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~ 641 (664)
+.+......+.+++.+||+.+|++||++.+++..|..+..
T Consensus 231 ~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~ 270 (316)
T cd05108 231 PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 270 (316)
T ss_pred CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence 2222334567788899999999999999999999887653
No 80
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.95 E-value=2.2e-27 Score=250.06 Aligned_cols=192 Identities=22% Similarity=0.268 Sum_probs=152.7
Q ss_pred ceeccCCCcCEEEEEEcC-CcEEEEEeccc--------------------------ceEEEEeEeecCCeeEEEEeccCC
Q 040814 425 NKLGEGGFGPVYKGKLLD-GQVIAVKRLSG--------------------------RTIRLMGCSLHGAERILVYEFMPN 477 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~--------------------------~~v~l~g~~~~~~~~~lV~Ey~~~ 477 (664)
+.||+|+||.||+|...+ ++.||||++++ +++++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 469999999999999854 88999997742 367888899889999999999999
Q ss_pred CchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------cccc
Q 040814 478 KSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NRVV 531 (664)
Q Consensus 478 gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~~~ 531 (664)
|+|..++. ....+++..+..++.||+.||.|||+.+++|+|+++.|. ....
T Consensus 81 g~L~~~~~---~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~ 157 (316)
T cd05592 81 GDLMFHIQ---SSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFC 157 (316)
T ss_pred CcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCcccccc
Confidence 99999884 345799999999999999999999999999999988761 1235
Q ss_pred ccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHH
Q 040814 532 GTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRC 611 (664)
Q Consensus 532 Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l 611 (664)
||+.|+|||++.+..++.++|||||||++|||++|+.||...+..+.. .. +.. .....+......+
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~---~~---------i~~--~~~~~~~~~~~~~ 223 (316)
T cd05592 158 GTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELF---DS---------ILN--DRPHFPRWISKEA 223 (316)
T ss_pred CCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHH---HH---------HHc--CCCCCCCCCCHHH
Confidence 899999999999989999999999999999999999998654321111 00 000 0112233334456
Q ss_pred HHHHHhcccccCCCCCCHH-HHH
Q 040814 612 IHAGLLCVHDQAVNRPTMA-DVV 633 (664)
Q Consensus 612 ~~l~~~Cl~~dP~~RPt~~-evl 633 (664)
.+++.+||+.+|++||++. +++
T Consensus 224 ~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 224 KDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred HHHHHHHccCCHHHcCCChHHHH
Confidence 7788889999999999875 443
No 81
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.95 E-value=2.7e-27 Score=244.91 Aligned_cols=206 Identities=26% Similarity=0.442 Sum_probs=161.3
Q ss_pred CccccceeccCCCcCEEEEEEcC------CcEEEEEeccc-----------------------ceEEEEeEeecCCeeEE
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLLD------GQVIAVKRLSG-----------------------RTIRLMGCSLHGAERIL 470 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~~------~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~l 470 (664)
+|.+.+.||+|+||.||+|...+ ++.||+|+++. +++++++++.+....++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 45667899999999999998632 57899999852 36899999999999999
Q ss_pred EEeccCCCchhHHhhccc-------------ccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc----------
Q 040814 471 VYEFMPNKSLDFFIFDSV-------------KKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT---------- 527 (664)
Q Consensus 471 V~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~---------- 527 (664)
++||+++++|..++.... ....+++..+..++.|++.||.|||+.+++|+|+++.|.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl 165 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKI 165 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCceEe
Confidence 999999999999985211 123588999999999999999999999999999999871
Q ss_pred ------------------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhc
Q 040814 528 ------------------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKE 588 (664)
Q Consensus 528 ------------------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~ 588 (664)
....+++.|+|||.+.+..++.++|||||||++|||++ |..|+......+ ..
T Consensus 166 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~---~~------ 236 (283)
T cd05091 166 SDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD---VI------ 236 (283)
T ss_pred cccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHH---HH------
Confidence 01123568999999998889999999999999999998 777875432211 11
Q ss_pred CChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhc
Q 040814 589 GKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQ 638 (664)
Q Consensus 589 ~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 638 (664)
+.+........+......+.+++..||+.+|++||++.+|+..|+.
T Consensus 237 ----~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 237 ----EMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred ----HHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 1111111112334455667888999999999999999999999864
No 82
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.95 E-value=1.4e-27 Score=251.46 Aligned_cols=192 Identities=23% Similarity=0.262 Sum_probs=153.2
Q ss_pred ceeccCCCcCEEEEEEcC-CcEEEEEeccc--------------------------ceEEEEeEeecCCeeEEEEeccCC
Q 040814 425 NKLGEGGFGPVYKGKLLD-GQVIAVKRLSG--------------------------RTIRLMGCSLHGAERILVYEFMPN 477 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~--------------------------~~v~l~g~~~~~~~~~lV~Ey~~~ 477 (664)
+.||+|+||.||+|+.+. ++.||+|++++ +++++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 469999999999999864 88999998742 257888999999999999999999
Q ss_pred CchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------cccc
Q 040814 478 KSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NRVV 531 (664)
Q Consensus 478 gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~~~ 531 (664)
|+|..++. ....+++..+..++.||++||+|||+.+++|+|+++.|. ....
T Consensus 81 g~L~~~i~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (316)
T cd05620 81 GDLMFHIQ---DKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFC 157 (316)
T ss_pred CcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccC
Confidence 99999884 345789999999999999999999999999999998871 1235
Q ss_pred ccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHH
Q 040814 532 GTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRC 611 (664)
Q Consensus 532 Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l 611 (664)
||+.|+|||++.+..++.++|||||||++|||++|+.||...+..+. .... .. .....+......+
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~---~~~~---------~~--~~~~~~~~~~~~~ 223 (316)
T cd05620 158 GTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDEL---FESI---------RV--DTPHYPRWITKES 223 (316)
T ss_pred CCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH---HHHH---------Hh--CCCCCCCCCCHHH
Confidence 78999999999999999999999999999999999999864332111 1000 00 0111222234456
Q ss_pred HHHHHhcccccCCCCCCHH-HHH
Q 040814 612 IHAGLLCVHDQAVNRPTMA-DVV 633 (664)
Q Consensus 612 ~~l~~~Cl~~dP~~RPt~~-evl 633 (664)
.+++.+||+.||++||++. ++.
T Consensus 224 ~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 224 KDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred HHHHHHHccCCHHHcCCChHHHH
Confidence 7788889999999999984 554
No 83
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.95 E-value=3.6e-27 Score=243.00 Aligned_cols=208 Identities=25% Similarity=0.406 Sum_probs=164.2
Q ss_pred hcCccccceeccCCCcCEEEEEEcC------CcEEEEEeccc-----------------------ceEEEEeEeecCCee
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLLD------GQVIAVKRLSG-----------------------RTIRLMGCSLHGAER 468 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~~------~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~ 468 (664)
.++|.+.+.||+|+||.||+|...+ ++.||+|.+.. +++++++++......
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 4578889999999999999998743 47899998753 368999999999999
Q ss_pred EEEEeccCCCchhHHhhcccc-------cCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------
Q 040814 469 ILVYEFMPNKSLDFFIFDSVK-------KKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-------------- 527 (664)
Q Consensus 469 ~lV~Ey~~~gsL~~~l~~~~~-------~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-------------- 527 (664)
++||||+++|+|.+++..... ...++|..+..++.||+.||.|||+.+++|+|+++.|.
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~dfg 164 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFG 164 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCcc
Confidence 999999999999999964321 23578999999999999999999999999999988770
Q ss_pred --------------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChh
Q 040814 528 --------------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKAS 592 (664)
Q Consensus 528 --------------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 592 (664)
....++..|+|||.+.+..++.++|||||||++|||++ |+.||......+. ..... .+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~---~~~~~-~~--- 237 (277)
T cd05032 165 MTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEV---LKFVI-DG--- 237 (277)
T ss_pred cchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHH---HHHHh-cC---
Confidence 11234668999999998889999999999999999998 8888754332211 11111 11
Q ss_pred HhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhc
Q 040814 593 ELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQ 638 (664)
Q Consensus 593 ~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 638 (664)
.....+......+.+++.+||+.+|++|||+.++++.|+.
T Consensus 238 ------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 238 ------GHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred ------CCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 0112233345678889999999999999999999999863
No 84
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=4.5e-28 Score=257.36 Aligned_cols=198 Identities=27% Similarity=0.388 Sum_probs=164.1
Q ss_pred ceeccCCCcCEEEEEEcC-CcEEEEEecc----------------------cceEEEEeEeecCCeeEEEEeccCCCchh
Q 040814 425 NKLGEGGFGPVYKGKLLD-GQVIAVKRLS----------------------GRTIRLMGCSLHGAERILVYEFMPNKSLD 481 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~~-~~~vavK~~~----------------------~~~v~l~g~~~~~~~~~lV~Ey~~~gsL~ 481 (664)
-+||+|.||+||-|+..+ ...+|||.+. +|+|+++|+|.++...-+.||-+|||||.
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence 369999999999999866 6679999874 35899999999999999999999999999
Q ss_pred HHhhcccccCCC--CHHHHHHHHHHHHHHHHHhhhcCcccccccccc---------------------------cccccc
Q 040814 482 FFIFDSVKKKQL--NWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN---------------------------TNRVVG 532 (664)
Q Consensus 482 ~~l~~~~~~~~l--~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n---------------------------~~~~~G 532 (664)
.+|.. +-+++ .+.++-.+.+||++||.|||+..++|+|++..| +..+.|
T Consensus 661 sLLrs--kWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTG 738 (1226)
T KOG4279|consen 661 SLLRS--KWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTG 738 (1226)
T ss_pred HHHHh--ccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCCcccccccc
Confidence 99953 34566 788889999999999999999999999999887 345679
Q ss_pred cCCccchhhhccCC--CCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHH
Q 040814 533 TYGYMAPEYAMNGI--VSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLR 610 (664)
Q Consensus 533 t~~Y~APE~~~~~~--~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 610 (664)
|..|||||++..++ |..++|||||||++.||.||++||......+.. +++-+ --....++|.+...+
T Consensus 739 TLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAA-----MFkVG------myKvHP~iPeelsae 807 (1226)
T KOG4279|consen 739 TLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAA-----MFKVG------MYKVHPPIPEELSAE 807 (1226)
T ss_pred chhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHh-----hhhhc------ceecCCCCcHHHHHH
Confidence 99999999998654 899999999999999999999998643222110 01111 012245778888999
Q ss_pred HHHHHHhcccccCCCCCCHHHHHHH
Q 040814 611 CIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 611 l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
+..++++|+.+||.+||++.++++.
T Consensus 808 ak~FilrcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 808 AKNFILRCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred HHHHHHHHcCCCcccCccHHHhccC
Confidence 9999999999999999999999853
No 85
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.95 E-value=5.9e-27 Score=239.81 Aligned_cols=207 Identities=24% Similarity=0.357 Sum_probs=161.8
Q ss_pred hcCccccceeccCCCcCEEEEEEcCCcEEEEEeccc---------------------ceEEEEeEeecCCeeEEEEeccC
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLLDGQVIAVKRLSG---------------------RTIRLMGCSLHGAERILVYEFMP 476 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~---------------------~~v~l~g~~~~~~~~~lV~Ey~~ 476 (664)
.++|.+.++||+|+||.||+|...+...||+|++.+ +++++++.+. +...++||||++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~ 83 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMS 83 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCC
Confidence 356888999999999999999987777899998863 2577777764 456799999999
Q ss_pred CCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc---------------------------cc
Q 040814 477 NKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT---------------------------NR 529 (664)
Q Consensus 477 ~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~---------------------------~~ 529 (664)
+|+|.+++... ....+++..+..++.|+++||.|||+.+++|+|+++.|. ..
T Consensus 84 ~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~ 162 (262)
T cd05071 84 KGSLLDFLKGE-MGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 162 (262)
T ss_pred CCcHHHHHhhc-cccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeeccccccccccC
Confidence 99999999542 234689999999999999999999999999999998771 01
Q ss_pred ccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHH
Q 040814 530 VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENEL 608 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 608 (664)
..++..|+|||+..+..++.++|||||||++|||++ |+.||......+. .. ..........+....
T Consensus 163 ~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~---~~----------~~~~~~~~~~~~~~~ 229 (262)
T cd05071 163 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV---LD----------QVERGYRMPCPPECP 229 (262)
T ss_pred CcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHH---HH----------HHhcCCCCCCccccC
Confidence 123456999999998899999999999999999999 7888754321111 10 000011112233455
Q ss_pred HHHHHHHHhcccccCCCCCCHHHHHHHHhcc
Q 040814 609 LRCIHAGLLCVHDQAVNRPTMADVVSCLRQN 639 (664)
Q Consensus 609 ~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 639 (664)
..+.+++.+||+.+|++||++.++++.|+..
T Consensus 230 ~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 230 ESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred HHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 6788999999999999999999999999864
No 86
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.95 E-value=4.1e-27 Score=239.17 Aligned_cols=198 Identities=26% Similarity=0.383 Sum_probs=156.8
Q ss_pred ceeccCCCcCEEEEEEc-CCcEEEEEeccc-----------------------ceEEEEeEeecCCeeEEEEeccCCCch
Q 040814 425 NKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-----------------------RTIRLMGCSLHGAERILVYEFMPNKSL 480 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV~Ey~~~gsL 480 (664)
+.||+|+||.||+|... +++.||+|.+.. +++++++++......++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 46999999999999975 589999997642 368999999999999999999999999
Q ss_pred hHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc---------------c-------------ccc
Q 040814 481 DFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN---------------R-------------VVG 532 (664)
Q Consensus 481 ~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~---------------~-------------~~G 532 (664)
.+++.. ....+++..+..++.|++.||.|||+.+++|+|+++.|.- . ..+
T Consensus 81 ~~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 158 (252)
T cd05084 81 LTFLRT--EGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQI 158 (252)
T ss_pred HHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCC
Confidence 999853 2346899999999999999999999999999999988710 0 011
Q ss_pred cCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHH
Q 040814 533 TYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRC 611 (664)
Q Consensus 533 t~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l 611 (664)
+..|+|||.+.+..++.++|||||||++|||++ |..|+........ ...+........+......+
T Consensus 159 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~ 225 (252)
T cd05084 159 PVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQT-------------REAIEQGVRLPCPELCPDAV 225 (252)
T ss_pred ceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHH-------------HHHHHcCCCCCCcccCCHHH
Confidence 235999999998899999999999999999998 8888754322111 11111111223333445678
Q ss_pred HHHHHhcccccCCCCCCHHHHHHHHh
Q 040814 612 IHAGLLCVHDQAVNRPTMADVVSCLR 637 (664)
Q Consensus 612 ~~l~~~Cl~~dP~~RPt~~evl~~L~ 637 (664)
.+++.+||+.+|++|||+.+|.++|+
T Consensus 226 ~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 226 YRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 88899999999999999999999986
No 87
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=5.5e-27 Score=249.29 Aligned_cols=198 Identities=21% Similarity=0.273 Sum_probs=165.1
Q ss_pred HhcCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc----------------------------ceEEEEeEeecCCe
Q 040814 417 ATNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG----------------------------RTIRLMGCSLHGAE 467 (664)
Q Consensus 417 ~t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~----------------------------~~v~l~g~~~~~~~ 467 (664)
..++|...+.||+|+||.|+.|... +++.||+|.+.+ ++++++.++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 4568899999999999999999864 589999996432 36889999999999
Q ss_pred eEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc---------------------
Q 040814 468 RILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN--------------------- 526 (664)
Q Consensus 468 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n--------------------- 526 (664)
.++||||+.+|+|.+++. +.+.+.+....+++.|++.|++|||+.+++|+|+|++|
T Consensus 95 ~~ivmEy~~gGdL~~~i~---~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~ 171 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIV---NKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAIS 171 (370)
T ss_pred EEEEEEecCCccHHHHHH---HcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEecccccccc
Confidence 999999999999999994 35789999999999999999999999999999999887
Q ss_pred ------cccccccCCccchhhhccCC-CC-ccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhh
Q 040814 527 ------TNRVVGTYGYMAPEYAMNGI-VS-MKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAA 598 (664)
Q Consensus 527 ------~~~~~Gt~~Y~APE~~~~~~-~s-~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 598 (664)
....+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||+..+ ...+....
T Consensus 172 ~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~----------------~~~l~~ki 235 (370)
T KOG0583|consen 172 PGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN----------------VPNLYRKI 235 (370)
T ss_pred CCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc----------------HHHHHHHH
Confidence 23357999999999999877 76 89999999999999999999997521 11122222
Q ss_pred hCC--CCCHHH-HHHHHHHHHhcccccCCCCCCHHHHH
Q 040814 599 LDG--PCPENE-LLRCIHAGLLCVHDQAVNRPTMADVV 633 (664)
Q Consensus 599 ~~~--~~~~~~-~~~l~~l~~~Cl~~dP~~RPt~~evl 633 (664)
..+ .+|... ...+..++.+|++.||.+|+|+.+|+
T Consensus 236 ~~~~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 236 RKGEFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred hcCCccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 222 233333 67788889999999999999999998
No 88
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.95 E-value=2.4e-27 Score=251.52 Aligned_cols=202 Identities=19% Similarity=0.229 Sum_probs=157.5
Q ss_pred CccccceeccCCCcCEEEEEE----cCCcEEEEEeccc---------------------------ceEEEEeEeecCCee
Q 040814 420 NFSTTNKLGEGGFGPVYKGKL----LDGQVIAVKRLSG---------------------------RTIRLMGCSLHGAER 468 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~----~~~~~vavK~~~~---------------------------~~v~l~g~~~~~~~~ 468 (664)
+|++.+.||+|+||.||+++. .+++.||+|++.+ +++++++++..++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 478889999999999999985 3488999998742 257788888888899
Q ss_pred EEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc---------------------
Q 040814 469 ILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------- 527 (664)
Q Consensus 469 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------- 527 (664)
++||||+++|+|.+++. +...+++..+..++.||+.||.|||+.+++|+|+++.|.
T Consensus 81 ~lv~e~~~~g~L~~~l~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~ 157 (332)
T cd05614 81 HLILDYVSGGEMFTHLY---QRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLS 157 (332)
T ss_pred EEEEeCCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccc
Confidence 99999999999999984 346799999999999999999999999999999998771
Q ss_pred ------ccccccCCccchhhhccC-CCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhC
Q 040814 528 ------NRVVGTYGYMAPEYAMNG-IVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALD 600 (664)
Q Consensus 528 ------~~~~Gt~~Y~APE~~~~~-~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 600 (664)
....||+.|||||++.+. .++.++|||||||++|||++|+.||...........+.. .+.. ..
T Consensus 158 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~--------~~~~--~~ 227 (332)
T cd05614 158 EEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSR--------RILK--CD 227 (332)
T ss_pred cCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHH--------HHhc--CC
Confidence 123589999999999865 478999999999999999999999864432221111110 0000 11
Q ss_pred CCCCHHHHHHHHHHHHhcccccCCCCC-----CHHHHHH
Q 040814 601 GPCPENELLRCIHAGLLCVHDQAVNRP-----TMADVVS 634 (664)
Q Consensus 601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~ 634 (664)
...+......+.+++.+||+.||++|| +++++++
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 228 PPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred CCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 122333445577888899999999999 6777764
No 89
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.95 E-value=1.9e-27 Score=250.94 Aligned_cols=186 Identities=24% Similarity=0.326 Sum_probs=151.4
Q ss_pred ceeccCCCcCEEEEEEcC-CcEEEEEeccc--------------------------ceEEEEeEeecCCeeEEEEeccCC
Q 040814 425 NKLGEGGFGPVYKGKLLD-GQVIAVKRLSG--------------------------RTIRLMGCSLHGAERILVYEFMPN 477 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~--------------------------~~v~l~g~~~~~~~~~lV~Ey~~~ 477 (664)
+.||+|+||.||+|+.+. ++.||||++.+ +++++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 469999999999999854 88999998742 257889999999999999999999
Q ss_pred CchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------cccc
Q 040814 478 KSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NRVV 531 (664)
Q Consensus 478 gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~~~ 531 (664)
|+|..++. +...+++..+..++.||+.||.|||+.+++|+|+++.|. ....
T Consensus 81 g~L~~~i~---~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~ 157 (320)
T cd05590 81 GDLMFHIQ---KSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFC 157 (320)
T ss_pred chHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccc
Confidence 99999884 345799999999999999999999999999999998771 1235
Q ss_pred ccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCC--CCCHHHHH
Q 040814 532 GTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDG--PCPENELL 609 (664)
Q Consensus 532 Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~ 609 (664)
||+.|||||++.+..++.++|||||||++|||++|+.||......+. ....... ..+.....
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~----------------~~~i~~~~~~~~~~~~~ 221 (320)
T cd05590 158 GTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDL----------------FEAILNDEVVYPTWLSQ 221 (320)
T ss_pred cCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHH----------------HHHHhcCCCCCCCCCCH
Confidence 88999999999999999999999999999999999999864332111 1111111 12223345
Q ss_pred HHHHHHHhcccccCCCCCCH
Q 040814 610 RCIHAGLLCVHDQAVNRPTM 629 (664)
Q Consensus 610 ~l~~l~~~Cl~~dP~~RPt~ 629 (664)
.+.+++.+||+.||++||++
T Consensus 222 ~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 222 DAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred HHHHHHHHHcccCHHHCCCC
Confidence 57788889999999999998
No 90
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=99.95 E-value=3.1e-28 Score=237.41 Aligned_cols=212 Identities=17% Similarity=0.237 Sum_probs=164.9
Q ss_pred cCccccceeccCCCcCEEEEEEcC-CcEEEEEeccc------------------------ceEEEEeEeecCCeeEEEEe
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG------------------------RTIRLMGCSLHGAERILVYE 473 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~------------------------~~v~l~g~~~~~~~~~lV~E 473 (664)
+.|+...++|+|+||.|||++.++ |+.||||++.. |+|.++..|.......||+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 457778999999999999999876 99999999842 46888899999999999999
Q ss_pred ccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------
Q 040814 474 FMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-------------------------- 527 (664)
Q Consensus 474 y~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-------------------------- 527 (664)
||+.--|++.- .....++.....+++.|+++|+.|+|+++++|+|++|+|.
T Consensus 82 ~~dhTvL~eLe---~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~Y 158 (396)
T KOG0593|consen 82 YCDHTVLHELE---RYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNY 158 (396)
T ss_pred ecchHHHHHHH---hccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchh
Confidence 99986665543 2345688999999999999999999999999999999981
Q ss_pred ccccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcC--ChhHhhhh-------
Q 040814 528 NRVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEG--KASELMEA------- 597 (664)
Q Consensus 528 ~~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~d~------- 597 (664)
+..+.|..|.|||.+.+ .+|...+||||+||++.||++|.+-|.+.++.+++..+.....+- +..+++..
T Consensus 159 TDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv 238 (396)
T KOG0593|consen 159 TDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGV 238 (396)
T ss_pred hhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeee
Confidence 22357889999999987 789999999999999999999999998877766665554321110 01111110
Q ss_pred ---hhC------CCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 598 ---ALD------GPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 598 ---~~~------~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
..+ ..+| ....-+++++..|++.||.+|++.+|++.
T Consensus 239 ~lP~~~~~epLe~k~p-~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 239 RLPEPEHPEPLERKYP-KISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred ecCCCCCccchhhhcc-cchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 000 1111 22335788999999999999999999873
No 91
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.95 E-value=4.3e-27 Score=244.97 Aligned_cols=215 Identities=25% Similarity=0.367 Sum_probs=162.3
Q ss_pred hcCccccceeccCCCcCEEEEEEcC-----------------CcEEEEEeccc-----------------------ceEE
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLLD-----------------GQVIAVKRLSG-----------------------RTIR 457 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~~-----------------~~~vavK~~~~-----------------------~~v~ 457 (664)
.++|++.+.||+|+||.||++...+ +..||+|++.. ++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 3578889999999999999998643 24689998753 3689
Q ss_pred EEeEeecCCeeEEEEeccCCCchhHHhhccc--------ccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--
Q 040814 458 LMGCSLHGAERILVYEFMPNKSLDFFIFDSV--------KKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-- 527 (664)
Q Consensus 458 l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~--------~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-- 527 (664)
+++++..+...++|+||+++++|..++.... ....+++..++.++.|++.||.|||+.+++|+|+++.|.
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili 163 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLV 163 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceee
Confidence 9999999999999999999999999996432 113689999999999999999999999999999998871
Q ss_pred --------------------------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHh--CCCCCCCCCCCCch
Q 040814 528 --------------------------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS--GRKNNNCYDEERPL 579 (664)
Q Consensus 528 --------------------------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt--G~~p~~~~~~~~~~ 579 (664)
....++..|||||.+.+..++.++|||||||++|||++ |..|+......+..
T Consensus 164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~ 243 (296)
T cd05051 164 GKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVI 243 (296)
T ss_pred cCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHH
Confidence 01123567999999998889999999999999999998 66676533221111
Q ss_pred hhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhc
Q 040814 580 NLVGYLWKEGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQ 638 (664)
Q Consensus 580 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 638 (664)
......+.... .......+.....++.+++.+||+.||++|||+.||++.|++
T Consensus 244 ~~~~~~~~~~~------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 244 ENAGHFFRDDG------RQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred HHHHhcccccc------ccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 11100000000 000011122334578899999999999999999999999863
No 92
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.95 E-value=3e-27 Score=244.15 Aligned_cols=212 Identities=25% Similarity=0.388 Sum_probs=165.9
Q ss_pred HhcCccccceeccCCCcCEEEEEEcC-----CcEEEEEeccc-----------------------ceEEEEeEeec-CCe
Q 040814 417 ATNNFSTTNKLGEGGFGPVYKGKLLD-----GQVIAVKRLSG-----------------------RTIRLMGCSLH-GAE 467 (664)
Q Consensus 417 ~t~~~~~~~~lg~G~fg~Vy~~~~~~-----~~~vavK~~~~-----------------------~~v~l~g~~~~-~~~ 467 (664)
..++|++.+.||+|+||.||+|...+ ++.|++|++.. +++++++++.+ +..
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 35688899999999999999999865 78899997753 36889998776 467
Q ss_pred eEEEEeccCCCchhHHhhccccc-----CCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc---------------
Q 040814 468 RILVYEFMPNKSLDFFIFDSVKK-----KQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------- 527 (664)
Q Consensus 468 ~~lV~Ey~~~gsL~~~l~~~~~~-----~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------- 527 (664)
.++++||+++++|..++...... ..+++..+..++.||+.||+|||+.+.+|.|+++.|.
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~ 163 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNAL 163 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCC
Confidence 89999999999999998643222 5699999999999999999999999999999988761
Q ss_pred -------------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhH
Q 040814 528 -------------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASE 593 (664)
Q Consensus 528 -------------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 593 (664)
....++..|+|||++.+..++.++|||||||++||+++ |+.||...... ....+. ..+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---~~~~~~-~~~---- 235 (280)
T cd05043 164 SRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPF---EMAAYL-KDG---- 235 (280)
T ss_pred cccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHH---HHHHHH-HcC----
Confidence 01124557999999998889999999999999999999 99998643221 111111 111
Q ss_pred hhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhcccc
Q 040814 594 LMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQ 641 (664)
Q Consensus 594 ~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~ 641 (664)
.....+......+.+++.+||+.+|++|||+.+++++|+.+..
T Consensus 236 -----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 236 -----YRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred -----CCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 1111122234567889999999999999999999999988753
No 93
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.95 E-value=3e-27 Score=263.25 Aligned_cols=206 Identities=20% Similarity=0.234 Sum_probs=160.9
Q ss_pred HHHHhcCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc------------------------ceEEEEeEeecCC--
Q 040814 414 IAAATNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG------------------------RTIRLMGCSLHGA-- 466 (664)
Q Consensus 414 i~~~t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~------------------------~~v~l~g~~~~~~-- 466 (664)
.....++|.+.+.||+|+||.||+|+.. +++.||||++.. +++++...+...+
T Consensus 27 ~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~ 106 (496)
T PTZ00283 27 AKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPR 106 (496)
T ss_pred ccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceeccccc
Confidence 3445679999999999999999999864 589999998853 1355544443221
Q ss_pred ------eeEEEEeccCCCchhHHhhccc-ccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc------------
Q 040814 467 ------ERILVYEFMPNKSLDFFIFDSV-KKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------ 527 (664)
Q Consensus 467 ------~~~lV~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------ 527 (664)
..++||||+++|+|.++|.... ....+++..+..|+.|++.||.|||+.+++|+|+++.|.
T Consensus 107 ~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~D 186 (496)
T PTZ00283 107 NPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGD 186 (496)
T ss_pred CcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEe
Confidence 3679999999999999996532 235789999999999999999999999999999998871
Q ss_pred ----------------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCCh
Q 040814 528 ----------------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKA 591 (664)
Q Consensus 528 ----------------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 591 (664)
....||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 187 FGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~--------------- 251 (496)
T PTZ00283 187 FGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENME--------------- 251 (496)
T ss_pred cccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH---------------
Confidence 1245889999999999999999999999999999999999998643211
Q ss_pred hHhhhhhhC---CCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 592 SELMEAALD---GPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 592 ~~~~d~~~~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
++++..+. ...+......+.+++.+||+.||.+||++.++++.
T Consensus 252 -~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 252 -EVMHKTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred -HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 11111111 12233445667888889999999999999999764
No 94
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.95 E-value=5.2e-27 Score=243.90 Aligned_cols=208 Identities=28% Similarity=0.382 Sum_probs=163.6
Q ss_pred CccccceeccCCCcCEEEEEEc------CCcEEEEEecc-----------------------cceEEEEeEeecCCeeEE
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLL------DGQVIAVKRLS-----------------------GRTIRLMGCSLHGAERIL 470 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~~~-----------------------~~~v~l~g~~~~~~~~~l 470 (664)
+|++.+.||+|+||.||+|... ..+.+|+|.+. ++++++++.+.+++..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4677899999999999999853 23578999764 247999999999999999
Q ss_pred EEeccCCCchhHHhhccc---------------------ccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--
Q 040814 471 VYEFMPNKSLDFFIFDSV---------------------KKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-- 527 (664)
Q Consensus 471 V~Ey~~~gsL~~~l~~~~---------------------~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-- 527 (664)
|+||+++|+|.+++.... ....+++..++.++.|++.||.|||+.+++|+|+++.|.
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill 160 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLV 160 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEE
Confidence 999999999999985321 123588999999999999999999999999999998771
Q ss_pred --------------------------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchh
Q 040814 528 --------------------------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLN 580 (664)
Q Consensus 528 --------------------------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~ 580 (664)
....++..|+|||.+.+..++.++||||||+++|||++ |+.||......+..
T Consensus 161 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~- 239 (290)
T cd05045 161 AEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLF- 239 (290)
T ss_pred cCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHH-
Confidence 01124567999999998889999999999999999999 99988543221111
Q ss_pred hhhhHHhcCChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhccc
Q 040814 581 LVGYLWKEGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNN 640 (664)
Q Consensus 581 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 640 (664)
+..........+......+.+++.+||+.+|++||+++|+++.|+++.
T Consensus 240 ------------~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~ 287 (290)
T cd05045 240 ------------NLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMM 287 (290)
T ss_pred ------------HHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence 111111122223334456888999999999999999999999999875
No 95
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.95 E-value=2.9e-27 Score=249.96 Aligned_cols=193 Identities=20% Similarity=0.207 Sum_probs=154.8
Q ss_pred ceeccCCCcCEEEEEEc-CCcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEEeccCCC
Q 040814 425 NKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVYEFMPNK 478 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~Ey~~~g 478 (664)
+.||+|+||.||+++.. +|+.||+|++.+ +++++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46999999999999975 489999998742 3688889999999999999999999
Q ss_pred chhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------ccccc
Q 040814 479 SLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NRVVG 532 (664)
Q Consensus 479 sL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~~~G 532 (664)
+|..++. +...+++..+..++.||+.||.|||+.+++|+|+++.|. ....|
T Consensus 81 ~L~~~l~---~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 157 (323)
T cd05595 81 ELFFHLS---RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG 157 (323)
T ss_pred cHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccC
Confidence 9998884 345799999999999999999999999999999998771 12358
Q ss_pred cCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHH
Q 040814 533 TYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRCI 612 (664)
Q Consensus 533 t~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~ 612 (664)
|+.|+|||++.+..++.++|||||||++|||++|+.||...+...... . +... ....+......+.
T Consensus 158 t~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~---~---------~~~~--~~~~p~~~~~~~~ 223 (323)
T cd05595 158 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE---L---------ILME--EIRFPRTLSPEAK 223 (323)
T ss_pred CcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHH---H---------HhcC--CCCCCCCCCHHHH
Confidence 899999999999999999999999999999999999986433221110 0 0000 0112233345567
Q ss_pred HHHHhcccccCCCCC-----CHHHHHH
Q 040814 613 HAGLLCVHDQAVNRP-----TMADVVS 634 (664)
Q Consensus 613 ~l~~~Cl~~dP~~RP-----t~~evl~ 634 (664)
+++.+||+.||++|| ++.++++
T Consensus 224 ~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 224 SLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred HHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 888889999999998 7888764
No 96
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.95 E-value=6.1e-27 Score=248.51 Aligned_cols=214 Identities=22% Similarity=0.277 Sum_probs=162.0
Q ss_pred hcCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-----------------------ceEEEEeEeecCCeeEEEEe
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-----------------------RTIRLMGCSLHGAERILVYE 473 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV~E 473 (664)
.++|++.++||+|+||.||++... +++.+|+|.++. +++++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 468999999999999999999985 488899997642 36899999999999999999
Q ss_pred ccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhc-Cccccccccccc------------------------c
Q 040814 474 FMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKY-SRLRMNESKVNT------------------------N 528 (664)
Q Consensus 474 y~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~-~~~h~d~~~~n~------------------------~ 528 (664)
|+++|+|.+++. +...+++.....++.|++.||.|||+. +++|+|+++.|. .
T Consensus 84 ~~~~~~L~~~l~---~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~ 160 (333)
T cd06650 84 HMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 160 (333)
T ss_pred cCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccc
Confidence 999999999994 345789999999999999999999975 699999998771 1
Q ss_pred cccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHh---------------------
Q 040814 529 RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWK--------------------- 587 (664)
Q Consensus 529 ~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~--------------------- 587 (664)
...||..|+|||++.+..++.++|||||||++|||++|+.||.................
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (333)
T cd06650 161 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSS 240 (333)
T ss_pred cCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhh
Confidence 23578899999999988999999999999999999999999864332111100000000
Q ss_pred ----c---CChhHhhhhhhCCCCCH----HHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 588 ----E---GKASELMEAALDGPCPE----NELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 588 ----~---~~~~~~~d~~~~~~~~~----~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
. .....+.+.......+. ....++.+++.+||+.||++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~ 298 (333)
T cd06650 241 YGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMV 298 (333)
T ss_pred hcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhh
Confidence 0 00011111111111110 12345788999999999999999999974
No 97
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.95 E-value=4.5e-27 Score=243.88 Aligned_cols=205 Identities=22% Similarity=0.258 Sum_probs=161.3
Q ss_pred CccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEEe
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVYE 473 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~E 473 (664)
+|+..+.||+|+||.||++... +++.||||++.. +++++++++..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4778899999999999999974 589999998742 26788889888899999999
Q ss_pred ccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-------------------------c
Q 040814 474 FMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-------------------------N 528 (664)
Q Consensus 474 y~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-------------------------~ 528 (664)
||++|+|..++... ....+++..+..++.|++.||.|||+.+++|+|+++.|. .
T Consensus 81 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 159 (285)
T cd05605 81 LMNGGDLKFHIYNM-GNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIR 159 (285)
T ss_pred ccCCCcHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCccc
Confidence 99999999888542 235699999999999999999999999999999888761 1
Q ss_pred cccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHH
Q 040814 529 RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENEL 608 (664)
Q Consensus 529 ~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 608 (664)
...|+..|+|||++.+..++.++|||||||++|||++|+.||...........+. ..+.. .....+....
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~---------~~~~~-~~~~~~~~~~ 229 (285)
T cd05605 160 GRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVE---------RRVKE-DQEEYSEKFS 229 (285)
T ss_pred cccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHH---------HHhhh-cccccCcccC
Confidence 2357889999999998899999999999999999999999997543221111110 00110 1112233345
Q ss_pred HHHHHHHHhcccccCCCCC-----CHHHHHHH
Q 040814 609 LRCIHAGLLCVHDQAVNRP-----TMADVVSC 635 (664)
Q Consensus 609 ~~l~~l~~~Cl~~dP~~RP-----t~~evl~~ 635 (664)
..+.+++.+||+.||++|| +++++++.
T Consensus 230 ~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 230 EAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred HHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 5677888999999999999 78888653
No 98
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.95 E-value=4.2e-27 Score=246.74 Aligned_cols=211 Identities=24% Similarity=0.316 Sum_probs=164.2
Q ss_pred hcCccccceeccCCCcCEEEEEEc--------CCcEEEEEeccc------------------------ceEEEEeEeecC
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLL--------DGQVIAVKRLSG------------------------RTIRLMGCSLHG 465 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~--------~~~~vavK~~~~------------------------~~v~l~g~~~~~ 465 (664)
.++|.+.+.||+|+||.||+++.. +...+|+|.+++ +++++++++...
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 367899999999999999999752 235799998853 268899999999
Q ss_pred CeeEEEEeccCCCchhHHhhcccc-------------cCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc----
Q 040814 466 AERILVYEFMPNKSLDFFIFDSVK-------------KKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN---- 528 (664)
Q Consensus 466 ~~~~lV~Ey~~~gsL~~~l~~~~~-------------~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~---- 528 (664)
+..++||||+++|+|.+++..... ...+++.++++++.||+.||+|||+.+.+|+|+++.|.-
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~ 176 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED 176 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCC
Confidence 999999999999999999964321 235899999999999999999999999999999887710
Q ss_pred ------------------------cccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhh
Q 040814 529 ------------------------RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVG 583 (664)
Q Consensus 529 ------------------------~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~ 583 (664)
...++..|+|||++.+..++.++|||||||++|||++ |+.||......+ ..
T Consensus 177 ~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~---~~- 252 (307)
T cd05098 177 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---LF- 252 (307)
T ss_pred CcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHH---HH-
Confidence 0112357999999998899999999999999999998 888875332111 00
Q ss_pred hHHhcCChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhcccc
Q 040814 584 YLWKEGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQ 641 (664)
Q Consensus 584 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~ 641 (664)
..+........+......+.+++.+||+.+|++||||.+|++.|+.+..
T Consensus 253 ---------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~ 301 (307)
T cd05098 253 ---------KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILA 301 (307)
T ss_pred ---------HHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHH
Confidence 0111111112233345567788899999999999999999999988763
No 99
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.95 E-value=3.3e-27 Score=242.64 Aligned_cols=206 Identities=23% Similarity=0.302 Sum_probs=157.4
Q ss_pred HHhcCccccceeccCCCcCEEEEEEcC-CcEEEEEecc----------------------cceEEEEeEeecC------C
Q 040814 416 AATNNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLS----------------------GRTIRLMGCSLHG------A 466 (664)
Q Consensus 416 ~~t~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~----------------------~~~v~l~g~~~~~------~ 466 (664)
.+++.|+..+.||+|+||.||+|...+ ++.||+|++. ++++++++++... .
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 82 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence 456778889999999999999999754 8899999873 2468888888653 4
Q ss_pred eeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-------------------
Q 040814 467 ERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------- 527 (664)
Q Consensus 467 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------- 527 (664)
..++||||+++++|.+++... ....+++..+..++.|++.||.|||+.+++|.|+++.|.
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~-~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~ 161 (272)
T cd06637 83 QLWLVMEFCGAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 161 (272)
T ss_pred EEEEEEEcCCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceec
Confidence 578999999999999998542 345789999999999999999999999999998887661
Q ss_pred -------ccccccCCccchhhhc-----cCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhh
Q 040814 528 -------NRVVGTYGYMAPEYAM-----NGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELM 595 (664)
Q Consensus 528 -------~~~~Gt~~Y~APE~~~-----~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (664)
....|+..|+|||++. +..++.++|||||||++|||++|+.||.......... ....
T Consensus 162 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~----~~~~------- 230 (272)
T cd06637 162 DRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF----LIPR------- 230 (272)
T ss_pred ccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHH----HHhc-------
Confidence 1235788899999986 3458889999999999999999999985432211110 0000
Q ss_pred hhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 596 EAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 596 d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
.......+......+.+++.+||+.+|.+|||+.++++
T Consensus 231 -~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 231 -NPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred -CCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 00001111123345778888999999999999999875
No 100
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.95 E-value=3.2e-27 Score=250.26 Aligned_cols=200 Identities=20% Similarity=0.283 Sum_probs=155.2
Q ss_pred ceeccCCCcCEEEEEEc-CCcEEEEEeccc--------------------------ceEEEEeEeecCCeeEEEEeccCC
Q 040814 425 NKLGEGGFGPVYKGKLL-DGQVIAVKRLSG--------------------------RTIRLMGCSLHGAERILVYEFMPN 477 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~--------------------------~~v~l~g~~~~~~~~~lV~Ey~~~ 477 (664)
+.||+|+||.||++... +++.||||++++ +++++++++...+..++|||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999975 488999998752 268899999999999999999999
Q ss_pred CchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------cccc
Q 040814 478 KSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NRVV 531 (664)
Q Consensus 478 gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~~~ 531 (664)
|+|..++. +.+.+++..+..++.||+.||.|||+.+++|+|+++.|. ....
T Consensus 81 g~L~~~~~---~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 157 (329)
T cd05588 81 GDLMFHMQ---RQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFC 157 (329)
T ss_pred CCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCcccccc
Confidence 99998884 346799999999999999999999999999999888761 1235
Q ss_pred ccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCch--hhhhhHHhcCChhHhhhhhhCCCCCHHHHH
Q 040814 532 GTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPL--NLVGYLWKEGKASELMEAALDGPCPENELL 609 (664)
Q Consensus 532 Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 609 (664)
||+.|+|||++.+..++.++|||||||++|||++|+.||......... ....+.. ..+... ....+.....
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~-----~~~~~~--~~~~p~~~~~ 230 (329)
T cd05588 158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLF-----QVILEK--QIRIPRSLSV 230 (329)
T ss_pred CCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHH-----HHHHcC--CCCCCCCCCH
Confidence 889999999999999999999999999999999999999643221100 0000000 001111 1122333445
Q ss_pred HHHHHHHhcccccCCCCCC------HHHHHH
Q 040814 610 RCIHAGLLCVHDQAVNRPT------MADVVS 634 (664)
Q Consensus 610 ~l~~l~~~Cl~~dP~~RPt------~~evl~ 634 (664)
.+.+++.+||+.||.+||+ ++++++
T Consensus 231 ~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 231 KASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred HHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 6778888999999999997 566653
No 101
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.95 E-value=4.7e-27 Score=243.22 Aligned_cols=214 Identities=24% Similarity=0.340 Sum_probs=161.4
Q ss_pred cccceeccCCCcCEEEEEE-----cCCcEEEEEeccc-----------------------ceEEEEeEeecC--CeeEEE
Q 040814 422 STTNKLGEGGFGPVYKGKL-----LDGQVIAVKRLSG-----------------------RTIRLMGCSLHG--AERILV 471 (664)
Q Consensus 422 ~~~~~lg~G~fg~Vy~~~~-----~~~~~vavK~~~~-----------------------~~v~l~g~~~~~--~~~~lV 471 (664)
+..+.||+|+||.||++.. .+++.||+|.+.. +++++++++... ...++|
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 7789999999999988753 3578999998753 268899887653 357899
Q ss_pred EeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc-----------------------
Q 040814 472 YEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN----------------------- 528 (664)
Q Consensus 472 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~----------------------- 528 (664)
|||+++++|.+++.. ..+++..+..++.|+++||.|||+.+++|+|+++.|.-
T Consensus 87 ~e~~~~~~l~~~~~~----~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~ 162 (283)
T cd05080 87 MEYVPLGSLRDYLPK----HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 162 (283)
T ss_pred ecCCCCCCHHHHHHH----cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCcch
Confidence 999999999999843 46999999999999999999999999999999988710
Q ss_pred ------cccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHH---hcCChhHhhhhhh
Q 040814 529 ------RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLW---KEGKASELMEAAL 599 (664)
Q Consensus 529 ------~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~~ 599 (664)
...++..|+|||.+.+..++.++||||||+++|||++|+.|+....... ........ ......+..+...
T Consensus 163 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 241 (283)
T cd05080 163 YYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKF-EEMIGPKQGQMTVVRLIELLERGM 241 (283)
T ss_pred hhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchh-hhhhcccccccchhhhhhhhhcCC
Confidence 0123445999999998889999999999999999999999975432210 00110000 0011122222222
Q ss_pred CCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhccc
Q 040814 600 DGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNN 640 (664)
Q Consensus 600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 640 (664)
..+.+......+.+++.+||+.+|++|||+++|+++|+.+.
T Consensus 242 ~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 242 RLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred CCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 22334445567888999999999999999999999998764
No 102
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.95 E-value=2.4e-27 Score=250.36 Aligned_cols=192 Identities=20% Similarity=0.265 Sum_probs=154.6
Q ss_pred ceeccCCCcCEEEEEEcC-CcEEEEEeccc--------------------------ceEEEEeEeecCCeeEEEEeccCC
Q 040814 425 NKLGEGGFGPVYKGKLLD-GQVIAVKRLSG--------------------------RTIRLMGCSLHGAERILVYEFMPN 477 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~--------------------------~~v~l~g~~~~~~~~~lV~Ey~~~ 477 (664)
+.||+|+||.||+|+... ++.||||++.+ +++++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 469999999999999854 78999998742 257889999999999999999999
Q ss_pred CchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------cccc
Q 040814 478 KSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NRVV 531 (664)
Q Consensus 478 gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~~~ 531 (664)
|+|..++. +...+++..+..++.||+.||.|||+.+++|+|+++.|. ....
T Consensus 81 ~~L~~~l~---~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 157 (321)
T cd05591 81 GDLMFQIQ---RSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFC 157 (321)
T ss_pred CcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCccccccc
Confidence 99998884 345799999999999999999999999999999998771 1234
Q ss_pred ccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCC--CCCHHHHH
Q 040814 532 GTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDG--PCPENELL 609 (664)
Q Consensus 532 Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~ 609 (664)
||+.|+|||++.+..++.++|||||||++|||++|+.||........ ....... ..+.....
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~----------------~~~i~~~~~~~p~~~~~ 221 (321)
T cd05591 158 GTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDL----------------FESILHDDVLYPVWLSK 221 (321)
T ss_pred cCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHH----------------HHHHHcCCCCCCCCCCH
Confidence 78999999999999999999999999999999999999865432211 1111111 11222335
Q ss_pred HHHHHHHhcccccCCCCC-------CHHHHHHH
Q 040814 610 RCIHAGLLCVHDQAVNRP-------TMADVVSC 635 (664)
Q Consensus 610 ~l~~l~~~Cl~~dP~~RP-------t~~evl~~ 635 (664)
.+.+++..||+.||++|| ++.++++.
T Consensus 222 ~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 222 EAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred HHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 577888889999999999 77777643
No 103
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.95 E-value=7.5e-27 Score=237.47 Aligned_cols=202 Identities=24% Similarity=0.324 Sum_probs=161.9
Q ss_pred CccccceeccCCCcCEEEEEEc-CCcEEEEEeccc------------------------ceEEEEeEeecCCeeEEEEec
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG------------------------RTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~------------------------~~v~l~g~~~~~~~~~lV~Ey 474 (664)
+|+..+.||+|++|.||+|..+ +++.|++|.+.. +++++++++.+++..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4777899999999999999975 489999998742 368899999999999999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------c
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------N 528 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~ 528 (664)
+++++|.+++... ....+++..+..++.|++.||.|||+.+++|.++++.|. .
T Consensus 81 ~~~~~L~~~l~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~ 159 (256)
T cd08529 81 AENGDLHKLLKMQ-RGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFAN 159 (256)
T ss_pred CCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccchhh
Confidence 9999999999653 246799999999999999999999999999999988771 1
Q ss_pred cccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHH
Q 040814 529 RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENEL 608 (664)
Q Consensus 529 ~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 608 (664)
...|++.|+|||++.+..++.++|||||||++|||++|+.||....... .... ... ......+....
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~---------~~~-~~~~~~~~~~~ 226 (256)
T cd08529 160 TIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA---LILK---------IIR-GVFPPVSQMYS 226 (256)
T ss_pred ccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH---HHHH---------HHc-CCCCCCccccC
Confidence 1246788999999999999999999999999999999999986433111 1100 000 01112222344
Q ss_pred HHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 609 LRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 609 ~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
..+.+++.+||+.+|++||++.++++.
T Consensus 227 ~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 227 QQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred HHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 568889999999999999999999863
No 104
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.95 E-value=5.8e-27 Score=245.19 Aligned_cols=209 Identities=22% Similarity=0.350 Sum_probs=163.1
Q ss_pred hcCccccceeccCCCcCEEEEEEc------CCcEEEEEeccc------------------------ceEEEEeEeecCCe
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLL------DGQVIAVKRLSG------------------------RTIRLMGCSLHGAE 467 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~~~~------------------------~~v~l~g~~~~~~~ 467 (664)
.++|...+.||+|+||.||++... .+..||||+++. +++++++++...+.
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 357888999999999999999741 256899997642 36889999999999
Q ss_pred eEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------
Q 040814 468 RILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-------------------- 527 (664)
Q Consensus 468 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-------------------- 527 (664)
.++||||+++|+|.+++... ....+++.++..++.||+.||.|||+.+++|.|+++.|.
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~ 192 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRK-RESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIM 192 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCccccccc
Confidence 99999999999999999542 223489999999999999999999999999999998871
Q ss_pred --------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhh
Q 040814 528 --------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAA 598 (664)
Q Consensus 528 --------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 598 (664)
....++..|+|||.+.+..++.++|||||||++|||++ |+.||......... ....+..
T Consensus 193 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~------------~~~~~~~ 260 (302)
T cd05055 193 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKF------------YKLIKEG 260 (302)
T ss_pred CCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHH------------HHHHHcC
Confidence 01123567999999999999999999999999999998 99997643322111 0111111
Q ss_pred hCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhcc
Q 040814 599 LDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQN 639 (664)
Q Consensus 599 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 639 (664)
.....+.....++.+++.+||+.+|++|||+.|+++.|++.
T Consensus 261 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 261 YRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 11111222345678889999999999999999999999764
No 105
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.95 E-value=7.3e-27 Score=240.89 Aligned_cols=195 Identities=25% Similarity=0.325 Sum_probs=151.8
Q ss_pred eeccCCCcCEEEEEEcC-------------------------CcEEEEEecc----------------------cceEEE
Q 040814 426 KLGEGGFGPVYKGKLLD-------------------------GQVIAVKRLS----------------------GRTIRL 458 (664)
Q Consensus 426 ~lg~G~fg~Vy~~~~~~-------------------------~~~vavK~~~----------------------~~~v~l 458 (664)
.||+|+||.||+|.+.. ...||+|++. ++++++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 69999999999997521 2358999774 347999
Q ss_pred EeEeecCCeeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc----------
Q 040814 459 MGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN---------- 528 (664)
Q Consensus 459 ~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~---------- 528 (664)
+++|..+...++||||+++|+|..++.. ....+++..+..++.||++||+|||+.+++|+|+++.|.-
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~ 159 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRK--EKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGT 159 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCc
Confidence 9999999999999999999999999853 2457899999999999999999999999999999988721
Q ss_pred -------------------cccccCCccchhhhcc-CCCCccchHHHHHHHHHHHH-hCCCCCCCCCCCCchhhhhhHHh
Q 040814 529 -------------------RVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIV-SGRKNNNCYDEERPLNLVGYLWK 587 (664)
Q Consensus 529 -------------------~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~Ell-tG~~p~~~~~~~~~~~~~~~~~~ 587 (664)
...++..|+|||.+.+ ..++.++|||||||++|||+ +|+.|+......+..
T Consensus 160 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~-------- 231 (274)
T cd05076 160 SPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKE-------- 231 (274)
T ss_pred cceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHH--------
Confidence 1125678999999875 56899999999999999995 688887643222111
Q ss_pred cCChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHh
Q 040814 588 EGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLR 637 (664)
Q Consensus 588 ~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~ 637 (664)
...... ...+......+.+++.+||+.+|++|||+.+|++.|.
T Consensus 232 -----~~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 232 -----RFYEKK--HRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred -----HHHHhc--cCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 111111 1111222245778889999999999999999999874
No 106
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.95 E-value=3.7e-27 Score=249.15 Aligned_cols=193 Identities=22% Similarity=0.306 Sum_probs=154.2
Q ss_pred CccccceeccCCCcCEEEEEEc-CCcEEEEEeccc--------------------------ceEEEEeEeecCCeeEEEE
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG--------------------------RTIRLMGCSLHGAERILVY 472 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~--------------------------~~v~l~g~~~~~~~~~lV~ 472 (664)
+|+..+.||+|+||.||+++.+ +++.||+|++.+ .++++.+++...+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 3667899999999999999975 489999998753 1356778888888999999
Q ss_pred eccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-------------------------
Q 040814 473 EFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------------- 527 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------------- 527 (664)
||+++|+|..++. +...+++.++..|+.||+.||.|||+.+++|+|+++.|.
T Consensus 81 Ey~~~g~L~~~i~---~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~ 157 (323)
T cd05615 81 EYVNGGDLMYHIQ---QVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVT 157 (323)
T ss_pred cCCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCcc
Confidence 9999999999984 346799999999999999999999999999999988771
Q ss_pred -ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHH
Q 040814 528 -NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPEN 606 (664)
Q Consensus 528 -~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 606 (664)
....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ... .+... ....+..
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~---~~~---------~i~~~--~~~~p~~ 223 (323)
T cd05615 158 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE---LFQ---------SIMEH--NVSYPKS 223 (323)
T ss_pred ccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHH---HHH---------HHHhC--CCCCCcc
Confidence 12348899999999999899999999999999999999999986433211 111 11111 1122333
Q ss_pred HHHHHHHHHHhcccccCCCCCCH
Q 040814 607 ELLRCIHAGLLCVHDQAVNRPTM 629 (664)
Q Consensus 607 ~~~~l~~l~~~Cl~~dP~~RPt~ 629 (664)
....+.+++.+||+.+|.+|++.
T Consensus 224 ~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 224 LSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred CCHHHHHHHHHHcccCHhhCCCC
Confidence 44567788889999999999985
No 107
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.95 E-value=3.2e-27 Score=250.21 Aligned_cols=195 Identities=19% Similarity=0.285 Sum_probs=152.4
Q ss_pred ceeccCCCcCEEEEEEcC-CcEEEEEeccc--------------------------ceEEEEeEeecCCeeEEEEeccCC
Q 040814 425 NKLGEGGFGPVYKGKLLD-GQVIAVKRLSG--------------------------RTIRLMGCSLHGAERILVYEFMPN 477 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~--------------------------~~v~l~g~~~~~~~~~lV~Ey~~~ 477 (664)
+.||+|+||.||+++... ++.||+|++.+ +++++++++..++..++|||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 469999999999999754 88999998753 258899999999999999999999
Q ss_pred CchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------cccc
Q 040814 478 KSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NRVV 531 (664)
Q Consensus 478 gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~~~ 531 (664)
|+|..++. ....+++..+..|+.||+.||.|||+.+++|+|+++.|. ....
T Consensus 81 ~~L~~~~~---~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~ 157 (329)
T cd05618 81 GDLMFHMQ---RQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFC 157 (329)
T ss_pred CCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCcccccc
Confidence 99998884 346799999999999999999999999999999998771 1235
Q ss_pred ccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCch--hhhhhHHhcCChhHhhhhhhCCCCCHHHHH
Q 040814 532 GTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPL--NLVGYLWKEGKASELMEAALDGPCPENELL 609 (664)
Q Consensus 532 Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 609 (664)
||+.|+|||++.+..++.++|||||||++|||++|+.||......... ....+... .+... ....|.....
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~-----~i~~~--~~~~p~~~~~ 230 (329)
T cd05618 158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ-----VILEK--QIRIPRSLSV 230 (329)
T ss_pred CCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHH-----HHhcC--CCCCCCCCCH
Confidence 889999999999999999999999999999999999998632211110 00000000 00110 1123444455
Q ss_pred HHHHHHHhcccccCCCCCCH
Q 040814 610 RCIHAGLLCVHDQAVNRPTM 629 (664)
Q Consensus 610 ~l~~l~~~Cl~~dP~~RPt~ 629 (664)
.+.+++.+||+.||++||++
T Consensus 231 ~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 231 KAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred HHHHHHHHHhcCCHHHcCCC
Confidence 67788889999999999983
No 108
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.95 E-value=4.9e-27 Score=243.91 Aligned_cols=211 Identities=24% Similarity=0.403 Sum_probs=163.6
Q ss_pred HhcCccccceeccCCCcCEEEEEEcC------CcEEEEEeccc-----------------------ceEEEEeEeecCCe
Q 040814 417 ATNNFSTTNKLGEGGFGPVYKGKLLD------GQVIAVKRLSG-----------------------RTIRLMGCSLHGAE 467 (664)
Q Consensus 417 ~t~~~~~~~~lg~G~fg~Vy~~~~~~------~~~vavK~~~~-----------------------~~v~l~g~~~~~~~ 467 (664)
..++|++.+.||+|+||.||+|..++ +..||+|.+.. +++++++++.....
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 46789999999999999999997532 45899998642 36889999999999
Q ss_pred eEEEEeccCCCchhHHhhcccc-------cCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-------------
Q 040814 468 RILVYEFMPNKSLDFFIFDSVK-------KKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------- 527 (664)
Q Consensus 468 ~~lV~Ey~~~gsL~~~l~~~~~-------~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------- 527 (664)
.++||||+++|+|.+++..... ...+++..+..++.||+.||.|||+.+++|+|+++.|.
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~Df 163 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDF 163 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECcC
Confidence 9999999999999999964211 23467788999999999999999999999999998871
Q ss_pred ---------------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCCh
Q 040814 528 ---------------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKA 591 (664)
Q Consensus 528 ---------------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 591 (664)
....++..|+|||.+.+..++.++|||||||++|||++ |..||......+ ......
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~---~~~~~~----- 235 (288)
T cd05061 164 GMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ---VLKFVM----- 235 (288)
T ss_pred CccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHH-----
Confidence 00123557999999998899999999999999999999 787875432211 111110
Q ss_pred hHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhccc
Q 040814 592 SELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNN 640 (664)
Q Consensus 592 ~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 640 (664)
+. .....+......+.+++.+||+.+|++|||+.++++.|++..
T Consensus 236 ----~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 236 ----DG-GYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred ----cC-CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 00 001122233467888999999999999999999999998754
No 109
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.95 E-value=4.8e-27 Score=248.68 Aligned_cols=195 Identities=21% Similarity=0.298 Sum_probs=153.2
Q ss_pred ceeccCCCcCEEEEEEcC-CcEEEEEeccc--------------------------ceEEEEeEeecCCeeEEEEeccCC
Q 040814 425 NKLGEGGFGPVYKGKLLD-GQVIAVKRLSG--------------------------RTIRLMGCSLHGAERILVYEFMPN 477 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~--------------------------~~v~l~g~~~~~~~~~lV~Ey~~~ 477 (664)
+.||+|+||.||++.... ++.||+|++++ +++++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 479999999999999754 78999998853 267889999999999999999999
Q ss_pred CchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------cccc
Q 040814 478 KSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NRVV 531 (664)
Q Consensus 478 gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~~~ 531 (664)
|+|..++. ..+.+++..+..++.||+.||.|||+.+++|+|+++.|. ...+
T Consensus 81 ~~L~~~~~---~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (327)
T cd05617 81 GDLMFHMQ---RQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFC 157 (327)
T ss_pred CcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceeccc
Confidence 99998884 345799999999999999999999999999999998771 1245
Q ss_pred ccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHH
Q 040814 532 GTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRC 611 (664)
Q Consensus 532 Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l 611 (664)
||+.|+|||++.+..++.++|||||||++|||++|+.||.............+... .+... ....+......+
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~-----~~~~~--~~~~p~~~~~~~ 230 (327)
T cd05617 158 GTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQ-----VILEK--PIRIPRFLSVKA 230 (327)
T ss_pred CCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHH-----HHHhC--CCCCCCCCCHHH
Confidence 88999999999999999999999999999999999999965433222111111110 00111 112233334557
Q ss_pred HHHHHhcccccCCCCCCH
Q 040814 612 IHAGLLCVHDQAVNRPTM 629 (664)
Q Consensus 612 ~~l~~~Cl~~dP~~RPt~ 629 (664)
.+++.+||+.||++||++
T Consensus 231 ~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 231 SHVLKGFLNKDPKERLGC 248 (327)
T ss_pred HHHHHHHhccCHHHcCCC
Confidence 788889999999999985
No 110
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.95 E-value=6.4e-27 Score=239.78 Aligned_cols=210 Identities=21% Similarity=0.282 Sum_probs=165.1
Q ss_pred cCccccceeccCCCcCEEEEEE-cCCcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKL-LDGQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVY 472 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~ 472 (664)
++|++.+.||+|+||.||++.. .+++.+|||.+.. +++++++++..++..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4678889999999999999996 4689999997642 2678899999999999999
Q ss_pred eccCCCchhHHhhccc-ccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc------------------------
Q 040814 473 EFMPNKSLDFFIFDSV-KKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------------ 527 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------------ 527 (664)
||+++++|.+++.... ....+++..+..++.||++||.|||+.+.+|.|+++.|.
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCc
Confidence 9999999999985422 245789999999999999999999999999999888761
Q ss_pred --ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCC-C
Q 040814 528 --NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPC-P 604 (664)
Q Consensus 528 --~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~ 604 (664)
....|+..|+|||++.+..++.++||||||+++|||++|..||...... ...... .+......+. +
T Consensus 162 ~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~----------~~~~~~~~~~~~ 230 (267)
T cd08229 162 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LYSLCK----------KIEQCDYPPLPS 230 (267)
T ss_pred ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch-HHHHhh----------hhhcCCCCCCCc
Confidence 1235778899999999888999999999999999999999998543211 000000 0000001111 1
Q ss_pred HHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhcc
Q 040814 605 ENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQN 639 (664)
Q Consensus 605 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 639 (664)
......+.+++.+||+.+|++||||.+|++++++.
T Consensus 231 ~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 231 DHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred ccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 23445677888899999999999999999998765
No 111
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.95 E-value=4.1e-27 Score=258.81 Aligned_cols=218 Identities=16% Similarity=0.184 Sum_probs=157.4
Q ss_pred HhcCccccceeccCCCcCEEEEEEc-CCcEEEEEecc------------------cceEEEEeEeecC--------CeeE
Q 040814 417 ATNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLS------------------GRTIRLMGCSLHG--------AERI 469 (664)
Q Consensus 417 ~t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~------------------~~~v~l~g~~~~~--------~~~~ 469 (664)
..++|++.+.||+|+||.||+|... +++.||||++. ++++++++++... ...+
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~ 143 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLN 143 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEE
Confidence 3568999999999999999999975 48999999873 2468887765331 2356
Q ss_pred EEEeccCCCchhHHhhcc-cccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc---------------------
Q 040814 470 LVYEFMPNKSLDFFIFDS-VKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------- 527 (664)
Q Consensus 470 lV~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------- 527 (664)
+||||+++ +|.+++... .....+++..+..++.||+.||.|||+.+++|+|+++.|.
T Consensus 144 lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~ 222 (440)
T PTZ00036 144 VVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLL 222 (440)
T ss_pred EEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccchhcc
Confidence 89999985 676666432 2346799999999999999999999999999999998871
Q ss_pred -----ccccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhh--h---
Q 040814 528 -----NRVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELM--E--- 596 (664)
Q Consensus 528 -----~~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--d--- 596 (664)
....||+.|||||++.+ ..++.++|||||||+||||++|++||......+....+...........+. .
T Consensus 223 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~ 302 (440)
T PTZ00036 223 AGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNY 302 (440)
T ss_pred CCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhh
Confidence 12347888999999876 469999999999999999999999997554332221111111111110000 0
Q ss_pred ----------hhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 597 ----------AALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 597 ----------~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
..+...++.....++.+++.+||+.||.+|||+.|+++.
T Consensus 303 ~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 303 ADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred hcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 000111122234567889999999999999999998843
No 112
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.95 E-value=8.3e-27 Score=237.63 Aligned_cols=206 Identities=23% Similarity=0.302 Sum_probs=160.2
Q ss_pred cCccccceeccCCCcCEEEEEEcCCcEEEEEeccc--------------------ceEEEEeEee-cCCeeEEEEeccCC
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLDGQVIAVKRLSG--------------------RTIRLMGCSL-HGAERILVYEFMPN 477 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~--------------------~~v~l~g~~~-~~~~~~lV~Ey~~~ 477 (664)
++|++.+.||+|+||.||++.. .++.||+|.+.. +++++++++. .++..++||||+++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~ 84 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAK 84 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE-cCCcEEEEEeCCCchHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCC
Confidence 4678889999999999999987 478899998853 2588888765 44568999999999
Q ss_pred CchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-----------------------ccccccC
Q 040814 478 KSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-----------------------NRVVGTY 534 (664)
Q Consensus 478 gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-----------------------~~~~Gt~ 534 (664)
++|.+++... ....+++..+..++.||+.||.|||+.+++|+|+++.|. ....++.
T Consensus 85 ~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 163 (256)
T cd05082 85 GSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV 163 (256)
T ss_pred CcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccccCCCCccce
Confidence 9999998542 234589999999999999999999999999999998871 0112345
Q ss_pred CccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHHH
Q 040814 535 GYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRCIH 613 (664)
Q Consensus 535 ~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~ 613 (664)
.|+|||++.+..++.++|||||||++|||++ |+.||......+ ... .+........+......+.+
T Consensus 164 ~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~---~~~----------~~~~~~~~~~~~~~~~~~~~ 230 (256)
T cd05082 164 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVP----------RVEKGYKMDAPDGCPPVVYD 230 (256)
T ss_pred eecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH---HHH----------HHhcCCCCCCCCCCCHHHHH
Confidence 7999999998899999999999999999998 898875322111 110 01111111222334556788
Q ss_pred HHHhcccccCCCCCCHHHHHHHHhcc
Q 040814 614 AGLLCVHDQAVNRPTMADVVSCLRQN 639 (664)
Q Consensus 614 l~~~Cl~~dP~~RPt~~evl~~L~~~ 639 (664)
++.+||+.+|++|||+.++++.|+++
T Consensus 231 li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 231 VMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred HHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 89999999999999999999999764
No 113
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=4e-27 Score=250.78 Aligned_cols=197 Identities=22% Similarity=0.276 Sum_probs=169.3
Q ss_pred CccccceeccCCCcCEEEEEE-cCCcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEEe
Q 040814 420 NFSTTNKLGEGGFGPVYKGKL-LDGQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVYE 473 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~E 473 (664)
-|+..+.||.|+-|.|-+|++ .+|+.+|||++.+ +++++++.+....++|||.|
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlE 92 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLE 92 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEE
Confidence 466779999999999999997 4599999998854 35899999999999999999
Q ss_pred ccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc-------------------------cc
Q 040814 474 FMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN-------------------------TN 528 (664)
Q Consensus 474 y~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n-------------------------~~ 528 (664)
|+++|.|+++| ..++.|++.+..+++.||..|+.|+|..+++|+|++++| ..
T Consensus 93 yv~gGELFdyl---v~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLe 169 (786)
T KOG0588|consen 93 YVPGGELFDYL---VRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLE 169 (786)
T ss_pred ecCCchhHHHH---HhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccCCcccc
Confidence 99999999999 467899999999999999999999999999999999988 23
Q ss_pred cccccCCccchhhhccCCCC-ccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCC--CCCH
Q 040814 529 RVVGTYGYMAPEYAMNGIVS-MKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDG--PCPE 605 (664)
Q Consensus 529 ~~~Gt~~Y~APE~~~~~~~s-~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~ 605 (664)
+-||++.|.|||++++.+|. .++||||.|||||.|+||+.||+.. +...++.+...+ ++|.
T Consensus 170 TSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd----------------Nir~LLlKV~~G~f~MPs 233 (786)
T KOG0588|consen 170 TSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD----------------NIRVLLLKVQRGVFEMPS 233 (786)
T ss_pred ccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCc----------------cHHHHHHHHHcCcccCCC
Confidence 45899999999999999985 7999999999999999999999732 223334444444 3455
Q ss_pred HHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 606 NELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 606 ~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
....++.+++.+++..||+.|.|++||++.
T Consensus 234 ~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 234 NISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred cCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 666677888888999999999999999975
No 114
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.94 E-value=9.1e-27 Score=241.95 Aligned_cols=213 Identities=18% Similarity=0.224 Sum_probs=158.9
Q ss_pred cCccccceeccCCCcCEEEEEEc-CCcEEEEEecc-----------------------cceEEEEeEeecCCeeEEEEec
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLS-----------------------GRTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~-----------------------~~~v~l~g~~~~~~~~~lV~Ey 474 (664)
++|+..++||+|+||.||+|..+ +++.||+|+++ ++++++++++..+...++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 56888999999999999999975 48999999874 2368999999988899999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------c
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------N 528 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~ 528 (664)
+++ +|.+++.. ....+++..+..++.||+.||+|||+.+++|+|+++.|. .
T Consensus 85 ~~~-~l~~~l~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~ 161 (288)
T cd07871 85 LDS-DLKQYLDN--CGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYS 161 (288)
T ss_pred CCc-CHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCcccc
Confidence 985 89888843 234688999999999999999999999999999998871 1
Q ss_pred cccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHh--------cCCh-hHhh---
Q 040814 529 RVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWK--------EGKA-SELM--- 595 (664)
Q Consensus 529 ~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~--------~~~~-~~~~--- 595 (664)
...|++.|+|||++.+ ..++.++||||+||++|||++|+.||......+....+..... .... .+..
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (288)
T cd07871 162 NEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYL 241 (288)
T ss_pred CceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccc
Confidence 2346888999999875 5689999999999999999999999975543332222111110 0000 0000
Q ss_pred hhhhCCC----CCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 596 EAALDGP----CPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 596 d~~~~~~----~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
.+..... ........+++++.+|++.||.+|||++|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 242 FPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred cCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000000 00112345678889999999999999999975
No 115
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.94 E-value=5.2e-27 Score=245.65 Aligned_cols=210 Identities=23% Similarity=0.319 Sum_probs=163.2
Q ss_pred hcCccccceeccCCCcCEEEEEEc--------CCcEEEEEeccc------------------------ceEEEEeEeecC
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLL--------DGQVIAVKRLSG------------------------RTIRLMGCSLHG 465 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~--------~~~~vavK~~~~------------------------~~v~l~g~~~~~ 465 (664)
.++|.+.+.||+|+||.||+++.. ++..||+|.+.. +++++++++...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 457888899999999999999741 245799998742 357899999999
Q ss_pred CeeEEEEeccCCCchhHHhhccc-------------ccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-----
Q 040814 466 AERILVYEFMPNKSLDFFIFDSV-------------KKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT----- 527 (664)
Q Consensus 466 ~~~~lV~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~----- 527 (664)
...++||||+++|+|.+++.... ....+++.++..++.||++||.|||+.+++|+|+++.|.
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~ 173 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTEN 173 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCC
Confidence 99999999999999999996431 124688999999999999999999999999999998871
Q ss_pred -----------------------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhh
Q 040814 528 -----------------------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVG 583 (664)
Q Consensus 528 -----------------------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~ 583 (664)
....+++.|+|||++.+..++.++||||||+++|||++ |..|+......+. ..
T Consensus 174 ~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~---~~ 250 (304)
T cd05101 174 NVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL---FK 250 (304)
T ss_pred CcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHH---HH
Confidence 00123457999999998889999999999999999998 7777753321111 10
Q ss_pred hHHhcCChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhccc
Q 040814 584 YLWKEGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNN 640 (664)
Q Consensus 584 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 640 (664)
. ... ......+......+.+++.+||+.+|.+|||+.||++.|+++.
T Consensus 251 ~-~~~---------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~ 297 (304)
T cd05101 251 L-LKE---------GHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRIL 297 (304)
T ss_pred H-HHc---------CCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHH
Confidence 0 111 1111122334556778889999999999999999999998876
No 116
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.94 E-value=1.2e-26 Score=237.20 Aligned_cols=205 Identities=26% Similarity=0.394 Sum_probs=160.6
Q ss_pred cCccccceeccCCCcCEEEEEEcCCcEEEEEeccc---------------------ceEEEEeEeecCCeeEEEEeccCC
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLDGQVIAVKRLSG---------------------RTIRLMGCSLHGAERILVYEFMPN 477 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~---------------------~~v~l~g~~~~~~~~~lV~Ey~~~ 477 (664)
++|.+.+.||+|++|.||+|..+.+..+|+|++.. +++++++++. .+..++||||+++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~ 84 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGK 84 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCC
Confidence 46788899999999999999987777899998753 2577888764 4568899999999
Q ss_pred CchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc---------------------------ccc
Q 040814 478 KSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT---------------------------NRV 530 (664)
Q Consensus 478 gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~---------------------------~~~ 530 (664)
++|.+++... ....+++..+..++.|++.||.|||+.+++|.|+++.|. ...
T Consensus 85 ~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 163 (260)
T cd05069 85 GSLLDFLKEG-DGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGA 163 (260)
T ss_pred CCHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCC
Confidence 9999999642 234689999999999999999999999999999988871 011
Q ss_pred cccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHH
Q 040814 531 VGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELL 609 (664)
Q Consensus 531 ~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 609 (664)
.++..|+|||+..+..++.++|||||||++|||++ |+.||......+ .... +........+.....
T Consensus 164 ~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~~----------~~~~~~~~~~~~~~~ 230 (260)
T cd05069 164 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE---VLEQ----------VERGYRMPCPQGCPE 230 (260)
T ss_pred ccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHH----------HHcCCCCCCCcccCH
Confidence 23457999999998899999999999999999999 888886432211 1111 000111122334456
Q ss_pred HHHHHHHhcccccCCCCCCHHHHHHHHhc
Q 040814 610 RCIHAGLLCVHDQAVNRPTMADVVSCLRQ 638 (664)
Q Consensus 610 ~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 638 (664)
.+.+++.+||+.+|++||++++|++.|++
T Consensus 231 ~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 231 SLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred HHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 68888899999999999999999999975
No 117
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.94 E-value=2.1e-27 Score=249.01 Aligned_cols=200 Identities=19% Similarity=0.249 Sum_probs=170.5
Q ss_pred cCccccceeccCCCcCEEEEEEcC-CcEEEEEecc------------------------cceEEEEeEeecCCe-eEEEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLS------------------------GRTIRLMGCSLHGAE-RILVY 472 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~------------------------~~~v~l~g~~~~~~~-~~lV~ 472 (664)
++|...+.+|+|+||.++..+.+. ++.+++|++. +++|.+.+.+.+++. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 578888999999999999998754 7899999874 347889999988888 99999
Q ss_pred eccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc--------------------------
Q 040814 473 EFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN-------------------------- 526 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n-------------------------- 526 (664)
|||+||+|.+.|.+. +...++++++.+++.|++.|+.|||+..++|+|++..|
T Consensus 84 ~Y~eGg~l~~~i~~~-k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~ 162 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQ-KGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSL 162 (426)
T ss_pred eecCCCCHHHHHHHH-hhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCchhh
Confidence 999999999999653 35789999999999999999999999999999998877
Q ss_pred cccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhC---CCC
Q 040814 527 TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALD---GPC 603 (664)
Q Consensus 527 ~~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~ 603 (664)
....+||+.||.||.+.+.+|..|+||||+||++|||++-+++|...+. ..++.+..+ .+.
T Consensus 163 a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m----------------~~Li~ki~~~~~~Pl 226 (426)
T KOG0589|consen 163 ASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM----------------SELILKINRGLYSPL 226 (426)
T ss_pred hheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch----------------HHHHHHHhhccCCCC
Confidence 2347899999999999999999999999999999999999999865432 223333332 345
Q ss_pred CHHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 604 PENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 604 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
+.....++..++..|++.+|+.||++.+++.+
T Consensus 227 p~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 227 PSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred CccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 66677778888888999999999999999876
No 118
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.94 E-value=1.5e-27 Score=256.76 Aligned_cols=204 Identities=20% Similarity=0.221 Sum_probs=160.0
Q ss_pred HHhcCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-------------------------ceEEEEeEeecCCeeE
Q 040814 416 AATNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-------------------------RTIRLMGCSLHGAERI 469 (664)
Q Consensus 416 ~~t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~ 469 (664)
...++|++.+.||+|+||.||+++.. +++.||+|++.+ +++++++++.+++..+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~ 119 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY 119 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 34578999999999999999999985 489999998742 2688999999999999
Q ss_pred EEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc----------------------
Q 040814 470 LVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT---------------------- 527 (664)
Q Consensus 470 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~---------------------- 527 (664)
+|||||++|+|.+++. ...+++..+..++.||+.||.|||+.+++|+|+++.|.
T Consensus 120 lv~Ey~~gg~L~~~l~----~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~ 195 (370)
T cd05596 120 MVMEYMPGGDLVNLMS----NYDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDAN 195 (370)
T ss_pred EEEcCCCCCcHHHHHH----hcCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCC
Confidence 9999999999999984 34688899999999999999999999999999998771
Q ss_pred -----ccccccCCccchhhhccC----CCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhh
Q 040814 528 -----NRVVGTYGYMAPEYAMNG----IVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAA 598 (664)
Q Consensus 528 -----~~~~Gt~~Y~APE~~~~~----~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 598 (664)
...+||+.|||||++.+. .++.++|||||||++|||++|+.||......... ..+.+..
T Consensus 196 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~------------~~i~~~~ 263 (370)
T cd05596 196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTY------------SKIMDHK 263 (370)
T ss_pred CcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHH------------HHHHcCC
Confidence 123589999999998653 4889999999999999999999998654321111 1111111
Q ss_pred hCCCCCH--HHHHHHHHHHHhcccccCCC--CCCHHHHHHH
Q 040814 599 LDGPCPE--NELLRCIHAGLLCVHDQAVN--RPTMADVVSC 635 (664)
Q Consensus 599 ~~~~~~~--~~~~~l~~l~~~Cl~~dP~~--RPt~~evl~~ 635 (664)
.....+. .....+.+++.+|++.+|.+ ||+++|+++.
T Consensus 264 ~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 264 NSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred CcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 0011111 23456777888899999987 9999999754
No 119
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.94 E-value=4e-27 Score=248.29 Aligned_cols=193 Identities=22% Similarity=0.277 Sum_probs=154.9
Q ss_pred ceeccCCCcCEEEEEEcC-CcEEEEEeccc--------------------------ceEEEEeEeecCCeeEEEEeccCC
Q 040814 425 NKLGEGGFGPVYKGKLLD-GQVIAVKRLSG--------------------------RTIRLMGCSLHGAERILVYEFMPN 477 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~--------------------------~~v~l~g~~~~~~~~~lV~Ey~~~ 477 (664)
+.||+|+||.||++.... ++.||||++.+ +++++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 469999999999999854 88999997742 368899999999999999999999
Q ss_pred CchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------cccc
Q 040814 478 KSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NRVV 531 (664)
Q Consensus 478 gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~~~ 531 (664)
|+|..++. +...+++..+..++.||+.||.|||+.+++|+|+++.|. ...+
T Consensus 81 ~~L~~~~~---~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (318)
T cd05570 81 GDLMFHIQ---RSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFC 157 (318)
T ss_pred CCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCccccee
Confidence 99998884 345799999999999999999999999999999888771 1235
Q ss_pred ccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHH
Q 040814 532 GTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRC 611 (664)
Q Consensus 532 Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l 611 (664)
||+.|+|||++.+..++.++|||||||++|||++|+.||...+.... ... +... ....+......+
T Consensus 158 g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~---~~~---------i~~~--~~~~~~~~~~~~ 223 (318)
T cd05570 158 GTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDEL---FQS---------ILED--EVRYPRWLSKEA 223 (318)
T ss_pred cCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHH---HHH---------HHcC--CCCCCCcCCHHH
Confidence 78999999999999999999999999999999999999864332111 100 0000 111222334567
Q ss_pred HHHHHhcccccCCCCCCH-----HHHHH
Q 040814 612 IHAGLLCVHDQAVNRPTM-----ADVVS 634 (664)
Q Consensus 612 ~~l~~~Cl~~dP~~RPt~-----~evl~ 634 (664)
.+++.+||+.||++||++ .++++
T Consensus 224 ~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 224 KSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred HHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 788889999999999999 77764
No 120
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.94 E-value=4.7e-27 Score=244.88 Aligned_cols=214 Identities=22% Similarity=0.317 Sum_probs=159.9
Q ss_pred cCccccceeccCCCcCEEEEEEcC---------------CcEEEEEeccc-----------------------ceEEEEe
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD---------------GQVIAVKRLSG-----------------------RTIRLMG 460 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~---------------~~~vavK~~~~-----------------------~~v~l~g 460 (664)
++|++.+.||+|+||.||++.... ...||+|++++ +++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 578889999999999999987632 23589998853 2589999
Q ss_pred EeecCCeeEEEEeccCCCchhHHhhcccc---------cCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc----
Q 040814 461 CSLHGAERILVYEFMPNKSLDFFIFDSVK---------KKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT---- 527 (664)
Q Consensus 461 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~---------~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~---- 527 (664)
++...+..++||||+++++|.+++..... ...+++..++.++.|+++||.|||+.+.+|.|+++.|.
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~ 164 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGN 164 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcC
Confidence 99999999999999999999999854211 12478999999999999999999999999999998871
Q ss_pred ------------------------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHh--CCCCCCCCCCCCchhh
Q 040814 528 ------------------------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS--GRKNNNCYDEERPLNL 581 (664)
Q Consensus 528 ------------------------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt--G~~p~~~~~~~~~~~~ 581 (664)
....++..|+|||++.+..++.++|||||||++|||++ +..||......+....
T Consensus 165 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~ 244 (295)
T cd05097 165 HYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIEN 244 (295)
T ss_pred CCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHH
Confidence 00123567999999998899999999999999999998 5566654332221111
Q ss_pred hhhHHhcCChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhc
Q 040814 582 VGYLWKEGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQ 638 (664)
Q Consensus 582 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 638 (664)
....+... ........+......+.+++.+||+.+|++||+|++|++.|++
T Consensus 245 ~~~~~~~~------~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 245 TGEFFRNQ------GRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred HHHhhhhc------cccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 10000000 0000011122234578899999999999999999999999864
No 121
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.94 E-value=3.6e-27 Score=249.78 Aligned_cols=194 Identities=20% Similarity=0.184 Sum_probs=155.3
Q ss_pred ceeccCCCcCEEEEEEc-CCcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEEeccCCC
Q 040814 425 NKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVYEFMPNK 478 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~Ey~~~g 478 (664)
+.||+|+||.||+++.. +++.||+|++.+ +++++.+++..++..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999975 489999998853 2578888999999999999999999
Q ss_pred chhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------ccccc
Q 040814 479 SLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NRVVG 532 (664)
Q Consensus 479 sL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~~~G 532 (664)
+|..++. ....+++..+..++.||+.||.|||+.+++|+|+++.|. ....|
T Consensus 81 ~L~~~l~---~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~g 157 (328)
T cd05593 81 ELFFHLS---RERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCG 157 (328)
T ss_pred CHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccC
Confidence 9998884 345799999999999999999999999999999998771 12358
Q ss_pred cCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHH
Q 040814 533 TYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRCI 612 (664)
Q Consensus 533 t~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~ 612 (664)
|+.|+|||++.+..++.++|||||||++|||++|+.||...+..+.. ..... .....+......+.
T Consensus 158 t~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~---~~~~~-----------~~~~~p~~~~~~~~ 223 (328)
T cd05593 158 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF---ELILM-----------EDIKFPRTLSADAK 223 (328)
T ss_pred CcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHH---HHhcc-----------CCccCCCCCCHHHH
Confidence 89999999999999999999999999999999999998643221111 00000 01122333345577
Q ss_pred HHHHhcccccCCCCC-----CHHHHHHH
Q 040814 613 HAGLLCVHDQAVNRP-----TMADVVSC 635 (664)
Q Consensus 613 ~l~~~Cl~~dP~~RP-----t~~evl~~ 635 (664)
+++.+||+.||++|| ++.|+++.
T Consensus 224 ~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 224 SLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred HHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 888899999999997 88888754
No 122
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.94 E-value=3.8e-27 Score=253.51 Aligned_cols=206 Identities=19% Similarity=0.229 Sum_probs=158.4
Q ss_pred HHHHhcCccccceeccCCCcCEEEEEEcC-CcEEEEEeccc-------------------------ceEEEEeEeecCCe
Q 040814 414 IAAATNNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG-------------------------RTIRLMGCSLHGAE 467 (664)
Q Consensus 414 i~~~t~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~-------------------------~~v~l~g~~~~~~~ 467 (664)
+....++|++.+.||+|+||.||+++... ++.+|+|++.+ +++++++++..++.
T Consensus 38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~ 117 (370)
T cd05621 38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKY 117 (370)
T ss_pred cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence 34456789999999999999999999854 88999998742 36899999999999
Q ss_pred eEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------
Q 040814 468 RILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-------------------- 527 (664)
Q Consensus 468 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-------------------- 527 (664)
.++|||||++|+|.+++. ...+++..+..++.||+.||+|||+.+++|+|+++.|.
T Consensus 118 ~~lv~Ey~~gg~L~~~l~----~~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~ 193 (370)
T cd05621 118 LYMVMEYMPGGDLVNLMS----NYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMD 193 (370)
T ss_pred EEEEEcCCCCCcHHHHHH----hcCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecc
Confidence 999999999999999984 34688999999999999999999999999999998771
Q ss_pred -------ccccccCCccchhhhccC----CCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhh
Q 040814 528 -------NRVVGTYGYMAPEYAMNG----IVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELME 596 (664)
Q Consensus 528 -------~~~~Gt~~Y~APE~~~~~----~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d 596 (664)
....||+.|||||++.+. .++.++||||+||+||||++|+.||...+..... ..+.+
T Consensus 194 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~------------~~i~~ 261 (370)
T cd05621 194 ETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTY------------SKIMD 261 (370)
T ss_pred cCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHH------------HHHHh
Confidence 134589999999999754 3789999999999999999999999644321111 11111
Q ss_pred hhhCCCCCH--HHHHHHHHHHHhcccccCCC--CCCHHHHHHH
Q 040814 597 AALDGPCPE--NELLRCIHAGLLCVHDQAVN--RPTMADVVSC 635 (664)
Q Consensus 597 ~~~~~~~~~--~~~~~l~~l~~~Cl~~dP~~--RPt~~evl~~ 635 (664)
.......+. .....+.+++..|++.++.+ ||++.|+++.
T Consensus 262 ~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 262 HKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred CCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 111111111 22344556667788755543 8899998875
No 123
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.94 E-value=6.4e-27 Score=248.55 Aligned_cols=212 Identities=19% Similarity=0.274 Sum_probs=155.5
Q ss_pred CccccceeccCCCcCEEEEEEc-CCcEEEEEeccc------------------------ceEEEEeEeecC-----CeeE
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG------------------------RTIRLMGCSLHG-----AERI 469 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~------------------------~~v~l~g~~~~~-----~~~~ 469 (664)
+|++.+.||+|+||.||+|... +++.||||++.. +++++++++... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 4788899999999999999975 489999998742 367888877543 2479
Q ss_pred EEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc----------------------
Q 040814 470 LVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT---------------------- 527 (664)
Q Consensus 470 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~---------------------- 527 (664)
+|||||+ ++|.+++. ....+++..+..++.||++||.|||+.+++|+|+++.|.
T Consensus 81 lv~e~~~-~~L~~~l~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 156 (338)
T cd07859 81 VVFELME-SDLHQVIK---ANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 156 (338)
T ss_pred EEEecCC-CCHHHHHH---hcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccc
Confidence 9999996 68988883 345799999999999999999999999999999988760
Q ss_pred -------ccccccCCccchhhhcc--CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHh-----------
Q 040814 528 -------NRVVGTYGYMAPEYAMN--GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWK----------- 587 (664)
Q Consensus 528 -------~~~~Gt~~Y~APE~~~~--~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~----------- 587 (664)
....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+.....
T Consensus 157 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 236 (338)
T cd07859 157 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVR 236 (338)
T ss_pred cCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhh
Confidence 12358889999999876 6789999999999999999999999865443222211111100
Q ss_pred cCChhHhhhhhhCC-CCC-----HHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 588 EGKASELMEAALDG-PCP-----ENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 588 ~~~~~~~~d~~~~~-~~~-----~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
.....+........ ..+ ......+.+++.+||+.||++|||++|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 237 NEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred hhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 00111111111000 000 0122456788899999999999999999864
No 124
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.94 E-value=1.1e-26 Score=235.53 Aligned_cols=198 Identities=25% Similarity=0.346 Sum_probs=158.1
Q ss_pred ceeccCCCcCEEEEEEcCCcEEEEEeccc-----------------------ceEEEEeEeecCCeeEEEEeccCCCchh
Q 040814 425 NKLGEGGFGPVYKGKLLDGQVIAVKRLSG-----------------------RTIRLMGCSLHGAERILVYEFMPNKSLD 481 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~~~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV~Ey~~~gsL~ 481 (664)
++||+|+||.||+|..++++.+|+|.++. +++++++++......++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 36999999999999988899999998742 3688999999999999999999999999
Q ss_pred HHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc---------------------------cccccC
Q 040814 482 FFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN---------------------------RVVGTY 534 (664)
Q Consensus 482 ~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~---------------------------~~~Gt~ 534 (664)
+++.. ....+++..+..++.|++.||.|||+.+.+|+|+++.|.- ...++.
T Consensus 81 ~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~ 158 (250)
T cd05085 81 SFLRK--KKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPI 158 (250)
T ss_pred HHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCcc
Confidence 99853 2346899999999999999999999999999999987710 012245
Q ss_pred CccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHHH
Q 040814 535 GYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRCIH 613 (664)
Q Consensus 535 ~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~ 613 (664)
.|+|||++....++.++|||||||++|||++ |..||....... ... .+........+......+.+
T Consensus 159 ~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~---~~~----------~~~~~~~~~~~~~~~~~~~~ 225 (250)
T cd05085 159 KWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ---ARE----------QVEKGYRMSCPQKCPDDVYK 225 (250)
T ss_pred cccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH---HHH----------HHHcCCCCCCCCCCCHHHHH
Confidence 6999999998899999999999999999999 998985432111 100 01111111223344567888
Q ss_pred HHHhcccccCCCCCCHHHHHHHHh
Q 040814 614 AGLLCVHDQAVNRPTMADVVSCLR 637 (664)
Q Consensus 614 l~~~Cl~~dP~~RPt~~evl~~L~ 637 (664)
++.+||+.+|++||++.|++++|.
T Consensus 226 li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 226 VMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHcccCcccCCCHHHHHHHhc
Confidence 999999999999999999999885
No 125
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.94 E-value=8e-27 Score=242.13 Aligned_cols=208 Identities=25% Similarity=0.420 Sum_probs=162.1
Q ss_pred hcCccccceeccCCCcCEEEEEEc------CCcEEEEEeccc-----------------------ceEEEEeEeecCCee
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLL------DGQVIAVKRLSG-----------------------RTIRLMGCSLHGAER 468 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~ 468 (664)
.++|+..+.||+|+||.||++..+ +++.||+|++.. +++++++++.++...
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 467888999999999999999863 367899998753 368899999999999
Q ss_pred EEEEeccCCCchhHHhhcccc-------------------cCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc-
Q 040814 469 ILVYEFMPNKSLDFFIFDSVK-------------------KKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN- 528 (664)
Q Consensus 469 ~lV~Ey~~~gsL~~~l~~~~~-------------------~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~- 528 (664)
++||||+++|+|.+++.+... ...+++..++.++.||+.||+|||+.+.+|+|+++.|.-
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~ 163 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLV 163 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEe
Confidence 999999999999999964211 135788999999999999999999999999998887610
Q ss_pred ---------------------------cccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchh
Q 040814 529 ---------------------------RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLN 580 (664)
Q Consensus 529 ---------------------------~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~ 580 (664)
....+..|+|||.+.+..++.++|||||||++|||++ |..||......+
T Consensus 164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~--- 240 (288)
T cd05050 164 GENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEE--- 240 (288)
T ss_pred cCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH---
Confidence 0112446999999998899999999999999999998 878875332211
Q ss_pred hhhhHHhcCChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhc
Q 040814 581 LVGYLWKEGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQ 638 (664)
Q Consensus 581 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 638 (664)
.... ...+. ....+.....++.+++.+||+.+|++|||+.|+++.|++
T Consensus 241 ~~~~-~~~~~---------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 241 VIYY-VRDGN---------VLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred HHHH-HhcCC---------CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 1110 11111 011223345678889999999999999999999999874
No 126
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.94 E-value=1.1e-26 Score=238.66 Aligned_cols=206 Identities=23% Similarity=0.351 Sum_probs=159.9
Q ss_pred ccccceeccCCCcCEEEEEEcC----CcEEEEEeccc------------------------ceEEEEeEeecCCe-----
Q 040814 421 FSTTNKLGEGGFGPVYKGKLLD----GQVIAVKRLSG------------------------RTIRLMGCSLHGAE----- 467 (664)
Q Consensus 421 ~~~~~~lg~G~fg~Vy~~~~~~----~~~vavK~~~~------------------------~~v~l~g~~~~~~~----- 467 (664)
|++.+.||+|+||.||+|.+.. +..||+|+++. +++++++++...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 4567899999999999998743 37899998752 26888988876554
Q ss_pred -eEEEEeccCCCchhHHhhccc---ccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc---------------
Q 040814 468 -RILVYEFMPNKSLDFFIFDSV---KKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN--------------- 528 (664)
Q Consensus 468 -~~lV~Ey~~~gsL~~~l~~~~---~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~--------------- 528 (664)
.++|+||+++|+|..++.... ....+++..+..++.|++.||.|||+.+++|+|+++.|.-
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 160 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLS 160 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccce
Confidence 789999999999999986432 2346899999999999999999999999999999988710
Q ss_pred -------------cccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHh
Q 040814 529 -------------RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASEL 594 (664)
Q Consensus 529 -------------~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (664)
...++..|+|||.+.+..++.++|||||||++|||++ |..||......+ .......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~---~~~~~~~------- 230 (273)
T cd05035 161 KKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHE---IYDYLRH------- 230 (273)
T ss_pred eeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHHc-------
Confidence 0113457999999988899999999999999999999 888875432211 1111111
Q ss_pred hhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhcc
Q 040814 595 MEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQN 639 (664)
Q Consensus 595 ~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 639 (664)
......+......+.+++.+||+.||.+|||+.|+++.|+++
T Consensus 231 ---~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 231 ---GNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred ---CCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 111122334556788899999999999999999999999865
No 127
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.94 E-value=1.3e-26 Score=236.75 Aligned_cols=208 Identities=27% Similarity=0.366 Sum_probs=165.7
Q ss_pred HhcCccccceeccCCCcCEEEEEEcCCcEEEEEeccc---------------------ceEEEEeEeecCCeeEEEEecc
Q 040814 417 ATNNFSTTNKLGEGGFGPVYKGKLLDGQVIAVKRLSG---------------------RTIRLMGCSLHGAERILVYEFM 475 (664)
Q Consensus 417 ~t~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~---------------------~~v~l~g~~~~~~~~~lV~Ey~ 475 (664)
..++|.+.+.||+|+||.||+|..++++.||||.+.. +++++++++..+...++||||+
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 83 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYM 83 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence 3467888999999999999999988888999998864 3688999998888999999999
Q ss_pred CCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc---------------------------
Q 040814 476 PNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN--------------------------- 528 (664)
Q Consensus 476 ~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~--------------------------- 528 (664)
++++|.+++... ....+++..+..++.|++.||.|||+.+++|.|+++.|.-
T Consensus 84 ~~~~L~~~i~~~-~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~ 162 (261)
T cd05034 84 SKGSLLDFLKSG-EGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTARE 162 (261)
T ss_pred CCCCHHHHHhcc-ccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchhhhhhh
Confidence 999999999542 2357899999999999999999999999999999988710
Q ss_pred cccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHH
Q 040814 529 RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENE 607 (664)
Q Consensus 529 ~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 607 (664)
...++..|+|||.+.+..++.++|||||||++|||++ |+.||........ ... +........+...
T Consensus 163 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~---~~~----------~~~~~~~~~~~~~ 229 (261)
T cd05034 163 GAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREV---LEQ----------VERGYRMPRPPNC 229 (261)
T ss_pred ccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH---HHH----------HHcCCCCCCCCCC
Confidence 0112346999999998899999999999999999999 9999854321111 110 1111111222233
Q ss_pred HHHHHHHHHhcccccCCCCCCHHHHHHHHhc
Q 040814 608 LLRCIHAGLLCVHDQAVNRPTMADVVSCLRQ 638 (664)
Q Consensus 608 ~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 638 (664)
...+.+++.+||+.+|++||+++++++.|+.
T Consensus 230 ~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 230 PEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 4567889999999999999999999999875
No 128
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.94 E-value=1.4e-27 Score=255.04 Aligned_cols=201 Identities=23% Similarity=0.272 Sum_probs=160.4
Q ss_pred cCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVY 472 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~ 472 (664)
++|.+.+.||+|+||.||+|+.. +++.||||++.+ +++++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 47889999999999999999985 589999998852 2578888899999999999
Q ss_pred eccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-------------------------
Q 040814 473 EFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------------- 527 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------------- 527 (664)
||+++++|.+++.. ...+++..+..++.||+.||.|||+.+++|+|+++.|.
T Consensus 81 e~~~~~~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~ 157 (350)
T cd05573 81 EYMPGGDLMNLLIR---KDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDR 157 (350)
T ss_pred cCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcc
Confidence 99999999999953 36799999999999999999999999999999888761
Q ss_pred ------------------------------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCC
Q 040814 528 ------------------------------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEER 577 (664)
Q Consensus 528 ------------------------------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~ 577 (664)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~ 237 (350)
T cd05573 158 EYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQE 237 (350)
T ss_pred cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHH
Confidence 01358899999999999999999999999999999999999986543211
Q ss_pred chhhhhhHHhcCChhHhhh--hhhCCCCCHHHHHHHHHHHHhcccccCCCCCC-HHHHHHH
Q 040814 578 PLNLVGYLWKEGKASELME--AALDGPCPENELLRCIHAGLLCVHDQAVNRPT-MADVVSC 635 (664)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~d--~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-~~evl~~ 635 (664)
... .+.. .....+........+.+++..|++ +|.+||+ ++++++.
T Consensus 238 ~~~------------~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 238 TYN------------KIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred HHH------------HHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 110 1111 001111111124556777788997 9999999 9999864
No 129
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.94 E-value=9.8e-27 Score=258.69 Aligned_cols=199 Identities=18% Similarity=0.169 Sum_probs=160.8
Q ss_pred CccccceeccCCCcCEEEEEEc-C-CcEEEEEecc----------------------cceEEEEeEeecCCeeEEEEecc
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLL-D-GQVIAVKRLS----------------------GRTIRLMGCSLHGAERILVYEFM 475 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~-~-~~~vavK~~~----------------------~~~v~l~g~~~~~~~~~lV~Ey~ 475 (664)
.|.+.+.||+|+||.||+|... + ++.||+|.+. ++++++++++..++..+|||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 3888999999999999999863 3 6788888652 34899999999999999999999
Q ss_pred CCCchhHHhhccc-ccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc---------------------------
Q 040814 476 PNKSLDFFIFDSV-KKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------- 527 (664)
Q Consensus 476 ~~gsL~~~l~~~~-~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------- 527 (664)
++|+|.++|.+.. ....+++..+..++.||+.||.|||+.+++|+|+++.|.
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~ 227 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDV 227 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcccccc
Confidence 9999999886432 245789999999999999999999999999999998871
Q ss_pred -ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCC---CC
Q 040814 528 -NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDG---PC 603 (664)
Q Consensus 528 -~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~ 603 (664)
...+||++|||||++.+..++.++|||||||++|||++|+.||...... +++...+.+ +.
T Consensus 228 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~----------------~~~~~~~~~~~~~~ 291 (478)
T PTZ00267 228 ASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQR----------------EIMQQVLYGKYDPF 291 (478)
T ss_pred ccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH----------------HHHHHHHhCCCCCC
Confidence 1234899999999999999999999999999999999999998643211 111111111 12
Q ss_pred CHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 604 PENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 604 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
+......+.+++.+||+.+|++||++++++.
T Consensus 292 ~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 292 PCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred CccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 2233456788888999999999999999864
No 130
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.94 E-value=5.1e-27 Score=253.86 Aligned_cols=203 Identities=18% Similarity=0.220 Sum_probs=155.9
Q ss_pred CccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEEe
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVYE 473 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~E 473 (664)
.|+..+.||+|+||.||+|+.. +++.||||++.+ +++++++++.+++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5788899999999999999874 488999998842 26899999999999999999
Q ss_pred ccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------
Q 040814 474 FMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-------------------------- 527 (664)
Q Consensus 474 y~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-------------------------- 527 (664)
||++|+|.+++. +...+++..+..++.||+.||.|||+.+++|+|+++.|.
T Consensus 82 ~~~gg~L~~~l~---~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~ 158 (381)
T cd05626 82 YIPGGDMMSLLI---RMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSK 158 (381)
T ss_pred cCCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccc
Confidence 999999999984 345789999999999999999999999999999888771
Q ss_pred -----------------------------------------------ccccccCCccchhhhccCCCCccchHHHHHHHH
Q 040814 528 -----------------------------------------------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLL 560 (664)
Q Consensus 528 -----------------------------------------------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL 560 (664)
...+||+.|||||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il 238 (381)
T cd05626 159 YYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVIL 238 (381)
T ss_pred cccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHH
Confidence 013589999999999988999999999999999
Q ss_pred HHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHHHHHHh--cccccCCCCCCHHHHHHH
Q 040814 561 LEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRCIHAGLL--CVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 561 ~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~--Cl~~dP~~RPt~~evl~~ 635 (664)
|||++|+.||......+... ..... ......+.......++.+++.+ |+..+|..||+++|+++.
T Consensus 239 ~elltG~~Pf~~~~~~~~~~---~i~~~-------~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h 305 (381)
T cd05626 239 FEMLVGQPPFLAPTPTETQL---KVINW-------ENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAH 305 (381)
T ss_pred HHHHhCCCCCcCCCHHHHHH---HHHcc-------ccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 99999999996543221110 00000 0000011011112234444433 777788889999999864
No 131
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.94 E-value=7.5e-27 Score=244.44 Aligned_cols=211 Identities=24% Similarity=0.295 Sum_probs=162.3
Q ss_pred hcCccccceeccCCCcCEEEEEEcC-Cc--EEEEEeccc------------------------ceEEEEeEeecCCeeEE
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLLD-GQ--VIAVKRLSG------------------------RTIRLMGCSLHGAERIL 470 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~~-~~--~vavK~~~~------------------------~~v~l~g~~~~~~~~~l 470 (664)
.++|++.+.||+|+||.||+|..++ +. .+|+|.+.. +++++++++.+++..++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 3578888999999999999999743 43 467876542 35889999999999999
Q ss_pred EEeccCCCchhHHhhccc-------------ccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccccc--------
Q 040814 471 VYEFMPNKSLDFFIFDSV-------------KKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTNR-------- 529 (664)
Q Consensus 471 V~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~~-------- 529 (664)
||||+++++|.+++.... ....+++.+++.++.||+.||+|||+.+++|+|+++.|.-.
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl 165 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKI 165 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEEe
Confidence 999999999999996432 12368999999999999999999999999999999887100
Q ss_pred -----------------ccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCCh
Q 040814 530 -----------------VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKA 591 (664)
Q Consensus 530 -----------------~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 591 (664)
..++..|+|||++.+..++.++|||||||++|||+| |..||......+.. .
T Consensus 166 ~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~---~-------- 234 (303)
T cd05088 166 ADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY---E-------- 234 (303)
T ss_pred CccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHH---H--------
Confidence 112456999999988889999999999999999998 99998543221111 0
Q ss_pred hHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhcccc
Q 040814 592 SELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQ 641 (664)
Q Consensus 592 ~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~ 641 (664)
.+........+......+.+++.+||+.+|++||++++++++|+.+..
T Consensus 235 --~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~ 282 (303)
T cd05088 235 --KLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 282 (303)
T ss_pred --HHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 000011111122234457888999999999999999999999887653
No 132
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=3.9e-27 Score=240.70 Aligned_cols=229 Identities=24% Similarity=0.300 Sum_probs=166.7
Q ss_pred ccccccccHHHHHHHhcCccccceeccCCCcCEEEEEEcCCcEEEEEeccc---------------------ceEEEEeE
Q 040814 403 KHELKGFNFQTIAAATNNFSTTNKLGEGGFGPVYKGKLLDGQVIAVKRLSG---------------------RTIRLMGC 461 (664)
Q Consensus 403 ~~~~~~~~~~~i~~~t~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~---------------------~~v~l~g~ 461 (664)
..+++.+-.+++. .+....+.||+|.||.||+|.+ .|+.||||++.. |++.+++.
T Consensus 198 GSGlplLVQRTia---rqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~srdE~SWfrEtEIYqTvmLRHENILgFIaa 273 (513)
T KOG2052|consen 198 GSGLPLLVQRTIA---RQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSRDERSWFRETEIYQTVMLRHENILGFIAA 273 (513)
T ss_pred CCCchhHhHHhhh---heeEEEEEecCccccceeeccc-cCCceEEEEecccchhhhhhHHHHHHHHHhccchhhhhhhc
Confidence 3567777666654 4567889999999999999999 688999999953 34445544
Q ss_pred eecC----CeeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhh--------cCcccccccccc---
Q 040814 462 SLHG----AERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK--------YSRLRMNESKVN--- 526 (664)
Q Consensus 462 ~~~~----~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~--------~~~~h~d~~~~n--- 526 (664)
-..+ .+++||.+|.++|||.+|| ++..++-...++++..+|.||++||- -.+.|+|+|..|
T Consensus 274 D~~~~gs~TQLwLvTdYHe~GSL~DyL----~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILV 349 (513)
T KOG2052|consen 274 DNKDNGSWTQLWLVTDYHEHGSLYDYL----NRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV 349 (513)
T ss_pred cccCCCceEEEEEeeecccCCcHHHHH----hhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEE
Confidence 4433 3589999999999999999 45789999999999999999999994 467899888877
Q ss_pred ---------------------------cccccccCCccchhhhccCC----C--CccchHHHHHHHHHHHHhCCCCCCCC
Q 040814 527 ---------------------------TNRVVGTYGYMAPEYAMNGI----V--SMKADVFSFGVLLLEIVSGRKNNNCY 573 (664)
Q Consensus 527 ---------------------------~~~~~Gt~~Y~APE~~~~~~----~--s~ksDVySfGvvL~ElltG~~p~~~~ 573 (664)
.+..+||.+|||||++.+.. | -..+||||||.|+||+.....- .+.
T Consensus 350 Kkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~-ggi 428 (513)
T KOG2052|consen 350 KKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCES-GGI 428 (513)
T ss_pred ccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhc-CCE
Confidence 35568999999999997532 2 2478999999999999764321 001
Q ss_pred CCCCchhhhhhHHhcCChhHhhh----hhhCCCCC-----HHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhccc
Q 040814 574 DEERPLNLVGYLWKEGKASELME----AALDGPCP-----ENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNN 640 (664)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~d----~~~~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 640 (664)
.++....+.+....+...+++.+ ..++...| .+.+..+.+++..||..+|..|.|+-.|-+.|.++.
T Consensus 429 ~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~ 504 (513)
T KOG2052|consen 429 VEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLS 504 (513)
T ss_pred ehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHh
Confidence 11111111111222222333322 22333333 367788999999999999999999999999888776
No 133
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.94 E-value=1.1e-26 Score=240.06 Aligned_cols=208 Identities=24% Similarity=0.345 Sum_probs=160.7
Q ss_pred hcCccccceeccCCCcCEEEEEEc-CCc----EEEEEeccc-----------------------ceEEEEeEeecCCeeE
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLL-DGQ----VIAVKRLSG-----------------------RTIRLMGCSLHGAERI 469 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~-~~~----~vavK~~~~-----------------------~~v~l~g~~~~~~~~~ 469 (664)
.++|+..+.||+|+||.||+|... +++ .||+|++.. +++++++++.. ...+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~ 84 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQ 84 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcE
Confidence 356788899999999999999853 444 489998753 25788888865 4578
Q ss_pred EEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc---------------------
Q 040814 470 LVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN--------------------- 528 (664)
Q Consensus 470 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~--------------------- 528 (664)
+++||+++|+|.+++.+. ...+++..++.++.||+.||.|||+.+++|+|+++.|.-
T Consensus 85 l~~~~~~~g~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~ 162 (279)
T cd05109 85 LVTQLMPYGCLLDYVREN--KDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDID 162 (279)
T ss_pred EEEEcCCCCCHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeecccc
Confidence 999999999999998542 357999999999999999999999999999999998710
Q ss_pred -------cccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhC
Q 040814 529 -------RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALD 600 (664)
Q Consensus 529 -------~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 600 (664)
...++..|+|||.+.+..++.++|||||||++|||++ |..||......... ..+.....
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~-------------~~~~~~~~ 229 (279)
T cd05109 163 ETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIP-------------DLLEKGER 229 (279)
T ss_pred cceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH-------------HHHHCCCc
Confidence 0112457999999998899999999999999999998 88887543211111 11111111
Q ss_pred CCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhcccc
Q 040814 601 GPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQ 641 (664)
Q Consensus 601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~ 641 (664)
.+.+......+.+++.+||+.||++||++.++++.|+.+..
T Consensus 230 ~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05109 230 LPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMAR 270 (279)
T ss_pred CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 12222344567788889999999999999999999988763
No 134
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.94 E-value=5.6e-27 Score=249.86 Aligned_cols=211 Identities=25% Similarity=0.358 Sum_probs=159.8
Q ss_pred hcCccccceeccCCCcCEEEEEE------cCCcEEEEEeccc------------------------ceEEEEeEeec-CC
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKL------LDGQVIAVKRLSG------------------------RTIRLMGCSLH-GA 466 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~------~~~~~vavK~~~~------------------------~~v~l~g~~~~-~~ 466 (664)
.++|++.+.||+|+||.||+|.. .+++.||||+++. +++++++++.. +.
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 45788899999999999999973 3478999998853 25778887765 44
Q ss_pred eeEEEEeccCCCchhHHhhcccc---------------------------------------------------------
Q 040814 467 ERILVYEFMPNKSLDFFIFDSVK--------------------------------------------------------- 489 (664)
Q Consensus 467 ~~~lV~Ey~~~gsL~~~l~~~~~--------------------------------------------------------- 489 (664)
..++|||||++|+|.+++.....
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 57899999999999999854210
Q ss_pred -------cCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc----------------------------cccccC
Q 040814 490 -------KKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN----------------------------RVVGTY 534 (664)
Q Consensus 490 -------~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~----------------------------~~~Gt~ 534 (664)
...+++..+..++.||++||.|||+.+++|+|+++.|.- ...++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~ 245 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPL 245 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCc
Confidence 124788899999999999999999999999999988710 012345
Q ss_pred CccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHHH
Q 040814 535 GYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRCIH 613 (664)
Q Consensus 535 ~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~ 613 (664)
.|+|||++.+..++.++||||||+++|||++ |..|+........ .. ....++ .....+......+.+
T Consensus 246 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~--~~-~~~~~~---------~~~~~~~~~~~~~~~ 313 (343)
T cd05103 246 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--FC-RRLKEG---------TRMRAPDYTTPEMYQ 313 (343)
T ss_pred ceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH--HH-HHHhcc---------CCCCCCCCCCHHHHH
Confidence 6999999998899999999999999999997 8888754322111 11 011111 111112122345788
Q ss_pred HHHhcccccCCCCCCHHHHHHHHhccc
Q 040814 614 AGLLCVHDQAVNRPTMADVVSCLRQNN 640 (664)
Q Consensus 614 l~~~Cl~~dP~~RPt~~evl~~L~~~~ 640 (664)
++..||+.+|++|||+.||++.|+.+.
T Consensus 314 ~~~~cl~~~p~~Rps~~eil~~l~~~~ 340 (343)
T cd05103 314 TMLDCWHGEPSQRPTFSELVEHLGNLL 340 (343)
T ss_pred HHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 899999999999999999999998875
No 135
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.94 E-value=1.5e-26 Score=241.40 Aligned_cols=202 Identities=20% Similarity=0.297 Sum_probs=160.8
Q ss_pred cCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc----------------------ceEEEEeEeecCCeeEEEEecc
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG----------------------RTIRLMGCSLHGAERILVYEFM 475 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~----------------------~~v~l~g~~~~~~~~~lV~Ey~ 475 (664)
.+|+..+.||+|+||.||+|... +++.||+|.+.. +++++++.+..+...++||||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 47888899999999999999864 588999998742 3689999999999999999999
Q ss_pred CCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------cc
Q 040814 476 PNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NR 529 (664)
Q Consensus 476 ~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~ 529 (664)
++++|.+++. ...+++.++..++.|++.||.|||+.+++|+|+++.|. ..
T Consensus 100 ~~~~L~~~~~----~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~ 175 (296)
T cd06654 100 AGGSLTDVVT----ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST 175 (296)
T ss_pred CCCCHHHHHH----hcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccccccCc
Confidence 9999999983 34689999999999999999999999999999888761 12
Q ss_pred ccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHH
Q 040814 530 VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELL 609 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 609 (664)
..|++.|+|||.+.+..++.++|||||||++|||++|+.||.......... ..... .......+.....
T Consensus 176 ~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~---~~~~~--------~~~~~~~~~~~~~ 244 (296)
T cd06654 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY---LIATN--------GTPELQNPEKLSA 244 (296)
T ss_pred ccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHH---HHhcC--------CCCCCCCccccCH
Confidence 357788999999998889999999999999999999999986433211110 00000 0001111223345
Q ss_pred HHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 610 RCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 610 ~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
.+.+++.+||+.+|++|||+.++++.
T Consensus 245 ~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 245 IFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred HHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 57788899999999999999999873
No 136
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.94 E-value=6.1e-27 Score=251.57 Aligned_cols=152 Identities=24% Similarity=0.318 Sum_probs=135.4
Q ss_pred cCccccceeccCCCcCEEEEEEcC-CcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVY 472 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~ 472 (664)
++|+..+.||+|+||.||++.... ++.||||++.+ +++++++.+.++...+|||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 478889999999999999998754 89999998853 2588999999999999999
Q ss_pred eccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-------------------------
Q 040814 473 EFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------------- 527 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------------- 527 (664)
|||++|+|.+++. +...+++..+..++.||+.||.|||+.+++|+|+++.|.
T Consensus 81 E~~~gg~L~~~l~---~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~ 157 (363)
T cd05628 81 EFLPGGDMMTLLM---KKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRT 157 (363)
T ss_pred cCCCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCcccccccccc
Confidence 9999999999994 346799999999999999999999999999999998771
Q ss_pred ------------------------------------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCC
Q 040814 528 ------------------------------------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNN 571 (664)
Q Consensus 528 ------------------------------------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~ 571 (664)
...+||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~ 237 (363)
T cd05628 158 EFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC 237 (363)
T ss_pred cccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCC
Confidence 02368999999999999999999999999999999999999996
Q ss_pred CC
Q 040814 572 CY 573 (664)
Q Consensus 572 ~~ 573 (664)
..
T Consensus 238 ~~ 239 (363)
T cd05628 238 SE 239 (363)
T ss_pred CC
Confidence 43
No 137
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.94 E-value=4.8e-27 Score=239.84 Aligned_cols=196 Identities=24% Similarity=0.358 Sum_probs=151.3
Q ss_pred ceeccCCCcCEEEEEEcC--------CcEEEEEecc----------------------cceEEEEeEeecCCeeEEEEec
Q 040814 425 NKLGEGGFGPVYKGKLLD--------GQVIAVKRLS----------------------GRTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~~--------~~~vavK~~~----------------------~~~v~l~g~~~~~~~~~lV~Ey 474 (664)
+.||+|+||.||+|.... ...||+|.+. ++++++++++..+...++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 469999999999998632 2348888764 2368899999998999999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc---------------------------
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------- 527 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------- 527 (664)
+++|+|..++... ...+++..+..++.||+.||.|||+.+++|+|+++.|.
T Consensus 81 ~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~ 158 (258)
T cd05078 81 VKFGSLDTYLKKN--KNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITV 158 (258)
T ss_pred CCCCcHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccccccccc
Confidence 9999999999542 34689999999999999999999999999999998771
Q ss_pred ---ccccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCC-CCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCC
Q 040814 528 ---NRVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGR-KNNNCYDEERPLNLVGYLWKEGKASELMEAALDGP 602 (664)
Q Consensus 528 ---~~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 602 (664)
....++..|+|||++.+ ..++.++|||||||++|||++|. .|+........ . ..... ...
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~---~----------~~~~~--~~~ 223 (258)
T cd05078 159 LPKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK---L----------QFYED--RHQ 223 (258)
T ss_pred CCchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH---H----------HHHHc--ccc
Confidence 01346778999999986 45899999999999999999995 45432211110 0 01111 112
Q ss_pred CCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHh
Q 040814 603 CPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLR 637 (664)
Q Consensus 603 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~ 637 (664)
.+......+.+++.+||+.+|++|||++++++.|+
T Consensus 224 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 224 LPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred CCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 23333456788889999999999999999999874
No 138
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.94 E-value=7e-27 Score=250.16 Aligned_cols=199 Identities=23% Similarity=0.284 Sum_probs=152.0
Q ss_pred CccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-----------------------ceEEEEeEeecCCeeEEEEecc
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-----------------------RTIRLMGCSLHGAERILVYEFM 475 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV~Ey~ 475 (664)
+|+..++||+|+||.||+|... +++.||||++.. +++++++++.+++..++|||||
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 154 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFM 154 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecC
Confidence 4556789999999999999975 589999998742 3689999999999999999999
Q ss_pred CCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------cc
Q 040814 476 PNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NR 529 (664)
Q Consensus 476 ~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~ 529 (664)
++|+|... ..+++..+..|+.||+.||.|||+.+++|+|+++.|. ..
T Consensus 155 ~~~~L~~~-------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~ 227 (353)
T PLN00034 155 DGGSLEGT-------HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNS 227 (353)
T ss_pred CCCccccc-------ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccccccccc
Confidence 99998543 2456778889999999999999999999999888761 12
Q ss_pred ccccCCccchhhhcc-----CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCC
Q 040814 530 VVGTYGYMAPEYAMN-----GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCP 604 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~~-----~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 604 (664)
..||..|+|||.+.. ...+.++|||||||++|||++|+.||.............. +........+
T Consensus 228 ~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~----------~~~~~~~~~~ 297 (353)
T PLN00034 228 SVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCA----------ICMSQPPEAP 297 (353)
T ss_pred cccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHH----------HhccCCCCCC
Confidence 468899999998843 2345699999999999999999999863222111111100 0000011222
Q ss_pred HHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 605 ENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 605 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
......+.+++.+||+.||++|||+.|+++.
T Consensus 298 ~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 298 ATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred CccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 3344567888889999999999999999875
No 139
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.94 E-value=3.7e-27 Score=253.33 Aligned_cols=202 Identities=19% Similarity=0.219 Sum_probs=157.2
Q ss_pred cCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVY 472 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~ 472 (664)
++|++.+.||+|+||.||+++.. +++.||||++.+ +++++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 47889999999999999999985 489999998842 3688999999999999999
Q ss_pred eccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc------------------------
Q 040814 473 EFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN------------------------ 528 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~------------------------ 528 (664)
|||++|+|.+++. +...+++..+..|+.||+.||.|||+.+++|+|+++.|.-
T Consensus 81 E~~~~g~L~~~l~---~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 157 (364)
T cd05599 81 EYLPGGDMMTLLM---KKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRT 157 (364)
T ss_pred CCCCCcHHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceeccccccc
Confidence 9999999999994 3457999999999999999999999999999999987610
Q ss_pred ----------------------------------------cccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCC
Q 040814 529 ----------------------------------------RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRK 568 (664)
Q Consensus 529 ----------------------------------------~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~ 568 (664)
..+||+.|||||++.+..++.++|||||||++|||++|+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~ 237 (364)
T cd05599 158 EFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYP 237 (364)
T ss_pred cccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCC
Confidence 1258999999999999999999999999999999999999
Q ss_pred CCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCC---HHHHHH
Q 040814 569 NNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPT---MADVVS 634 (664)
Q Consensus 569 p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt---~~evl~ 634 (664)
||......+. ........ ..+..+........+.+++.+|+. +|.+|++ +.|+++
T Consensus 238 Pf~~~~~~~~---~~~i~~~~-------~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 238 PFCSDNPQET---YRKIINWK-------ETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred CCCCCCHHHH---HHHHHcCC-------CccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 9865432211 11110000 000000011122345566666776 8999998 888875
No 140
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.94 E-value=1.6e-26 Score=235.37 Aligned_cols=204 Identities=20% Similarity=0.334 Sum_probs=161.1
Q ss_pred cCccccceeccCCCcCEEEEEEcCCcEEEEEeccc---------------------ceEEEEeEeecCCeeEEEEeccCC
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLDGQVIAVKRLSG---------------------RTIRLMGCSLHGAERILVYEFMPN 477 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~---------------------~~v~l~g~~~~~~~~~lV~Ey~~~ 477 (664)
.+|+..+.||+|+||.||++...+++.+|+|.+.. +++++++++......++||||+++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 83 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEH 83 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCC
Confidence 46777899999999999999987788999998753 268899999988999999999999
Q ss_pred CchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc---------------------------cc
Q 040814 478 KSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN---------------------------RV 530 (664)
Q Consensus 478 gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~---------------------------~~ 530 (664)
++|.+++.. ....+++..+..++.|++.||+|||+.+.+|.|+++.|.- ..
T Consensus 84 ~~L~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 161 (256)
T cd05112 84 GCLSDYLRA--QRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGT 161 (256)
T ss_pred CcHHHHHHh--CccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCcccccCCC
Confidence 999999853 2346899999999999999999999999999999887710 01
Q ss_pred cccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHH
Q 040814 531 VGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELL 609 (664)
Q Consensus 531 ~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 609 (664)
.++.+|+|||.+.+..++.++||||||+++|||++ |+.||......+ ..... .+ ......+.....
T Consensus 162 ~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~---~~~~~-~~---------~~~~~~~~~~~~ 228 (256)
T cd05112 162 KFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE---VVETI-NA---------GFRLYKPRLASQ 228 (256)
T ss_pred ccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH---HHHHH-hC---------CCCCCCCCCCCH
Confidence 13357999999998899999999999999999998 899885432111 11100 00 001111222345
Q ss_pred HHHHHHHhcccccCCCCCCHHHHHHHHh
Q 040814 610 RCIHAGLLCVHDQAVNRPTMADVVSCLR 637 (664)
Q Consensus 610 ~l~~l~~~Cl~~dP~~RPt~~evl~~L~ 637 (664)
.+.+++.+||+.+|++|||+.+++++|.
T Consensus 229 ~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 229 SVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred HHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 6888999999999999999999999873
No 141
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.94 E-value=1.9e-26 Score=235.68 Aligned_cols=206 Identities=25% Similarity=0.368 Sum_probs=162.1
Q ss_pred hcCccccceeccCCCcCEEEEEEcCCcEEEEEeccc---------------------ceEEEEeEeecCCeeEEEEeccC
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLLDGQVIAVKRLSG---------------------RTIRLMGCSLHGAERILVYEFMP 476 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~---------------------~~v~l~g~~~~~~~~~lV~Ey~~ 476 (664)
.++|++.++||+|+||.||++...++..+|+|.+.+ +++++.+++.+ ...+++|||++
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~ 83 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMA 83 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCC
Confidence 467888999999999999999987788899998853 25788888777 67899999999
Q ss_pred CCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc---------------------------cc
Q 040814 477 NKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT---------------------------NR 529 (664)
Q Consensus 477 ~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~---------------------------~~ 529 (664)
+++|.+++... ....+++..+..++.|++.||.|||+.+.+|+|+++.|. ..
T Consensus 84 ~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~ 162 (260)
T cd05073 84 KGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG 162 (260)
T ss_pred CCcHHHHHHhC-CccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccC
Confidence 99999999542 245689999999999999999999999999999998871 00
Q ss_pred ccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHH
Q 040814 530 VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENEL 608 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 608 (664)
..++..|+|||++....++.++|||||||++|||++ |+.||...+.... .. ....+ ...+.+....
T Consensus 163 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~---~~-~~~~~---------~~~~~~~~~~ 229 (260)
T cd05073 163 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV---IR-ALERG---------YRMPRPENCP 229 (260)
T ss_pred CcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHH---HH-HHhCC---------CCCCCcccCC
Confidence 123456999999998889999999999999999999 8988864322111 11 01111 1111222344
Q ss_pred HHHHHHHHhcccccCCCCCCHHHHHHHHhc
Q 040814 609 LRCIHAGLLCVHDQAVNRPTMADVVSCLRQ 638 (664)
Q Consensus 609 ~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 638 (664)
..+.+++.+||+.+|++||++.++.++|+.
T Consensus 230 ~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 230 EELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred HHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 567888899999999999999999999975
No 142
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.94 E-value=1.2e-26 Score=239.99 Aligned_cols=207 Identities=24% Similarity=0.379 Sum_probs=160.0
Q ss_pred cCccccceeccCCCcCEEEEEEc------CCcEEEEEeccc----------------------ceEEEEeEeecCCeeEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL------DGQVIAVKRLSG----------------------RTIRLMGCSLHGAERIL 470 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~~~~----------------------~~v~l~g~~~~~~~~~l 470 (664)
.+|...++||+|+||.||++... ++..+|+|.+.. +++++++++..+...++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 45677899999999999999742 356899998742 36889999999999999
Q ss_pred EEeccCCCchhHHhhcccc------------cCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-----------
Q 040814 471 VYEFMPNKSLDFFIFDSVK------------KKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT----------- 527 (664)
Q Consensus 471 V~Ey~~~gsL~~~l~~~~~------------~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~----------- 527 (664)
||||+++++|.+++..... ...+++..+..++.||+.||+|||+.+++|+|+++.|.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~ 164 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIG 164 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEEC
Confidence 9999999999999864321 13589999999999999999999999999999998771
Q ss_pred -----------------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcC
Q 040814 528 -----------------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEG 589 (664)
Q Consensus 528 -----------------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 589 (664)
....+++.|+|||.+.+..++.++|||||||++|||++ |+.||......+..
T Consensus 165 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~---------- 234 (280)
T cd05092 165 DFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAI---------- 234 (280)
T ss_pred CCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHH----------
Confidence 01123567999999999999999999999999999998 88887533221111
Q ss_pred ChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhc
Q 040814 590 KASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQ 638 (664)
Q Consensus 590 ~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 638 (664)
+..........+......+.+++.+||+.||.+||++.+|++.|+.
T Consensus 235 ---~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 235 ---ECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred ---HHHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 0011111111222334557788899999999999999999998863
No 143
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.94 E-value=1.9e-26 Score=236.21 Aligned_cols=195 Identities=23% Similarity=0.284 Sum_probs=150.0
Q ss_pred ceeccCCCcCEEEEEEcC-------------CcEEEEEecc----------------------cceEEEEeEeecCCeeE
Q 040814 425 NKLGEGGFGPVYKGKLLD-------------GQVIAVKRLS----------------------GRTIRLMGCSLHGAERI 469 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~~-------------~~~vavK~~~----------------------~~~v~l~g~~~~~~~~~ 469 (664)
+.||+|+||.||+|...+ ...||+|.+. ++++++++++......+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 468999999999998532 2358999764 34799999999999999
Q ss_pred EEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc---------------------
Q 040814 470 LVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN--------------------- 528 (664)
Q Consensus 470 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~--------------------- 528 (664)
+||||+++|+|+.++.. +...+++..+..|+.||++||+|||+.+++|+|+++.|.-
T Consensus 81 lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~ 158 (262)
T cd05077 81 MVEEFVEFGPLDLFMHR--KSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGI 158 (262)
T ss_pred EEEecccCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCC
Confidence 99999999999998843 2456999999999999999999999999999999988711
Q ss_pred --------cccccCCccchhhhc-cCCCCccchHHHHHHHHHHHH-hCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhh
Q 040814 529 --------RVVGTYGYMAPEYAM-NGIVSMKADVFSFGVLLLEIV-SGRKNNNCYDEERPLNLVGYLWKEGKASELMEAA 598 (664)
Q Consensus 529 --------~~~Gt~~Y~APE~~~-~~~~s~ksDVySfGvvL~Ell-tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 598 (664)
...++..|+|||.+. +..++.++|||||||++|||+ +|+.|+......+.. ......
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~-------------~~~~~~ 225 (262)
T cd05077 159 PITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE-------------RFYEGQ 225 (262)
T ss_pred CccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH-------------HHHhcC
Confidence 123567899999987 467899999999999999998 577776532211110 000000
Q ss_pred hCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHH
Q 040814 599 LDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCL 636 (664)
Q Consensus 599 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L 636 (664)
.. ........+.+++.+||+.||++||++.+|++.|
T Consensus 226 ~~--~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 226 CM--LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred cc--CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 00 1111234577888899999999999999999876
No 144
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.94 E-value=1.4e-26 Score=241.46 Aligned_cols=214 Identities=24% Similarity=0.337 Sum_probs=160.5
Q ss_pred cCccccceeccCCCcCEEEEEEc-----------------CCcEEEEEeccc-----------------------ceEEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-----------------DGQVIAVKRLSG-----------------------RTIRL 458 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-----------------~~~~vavK~~~~-----------------------~~v~l 458 (664)
++|++.+.||+|+||.||++... +...||+|++.. +++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 56888999999999999998532 245789998853 26899
Q ss_pred EeEeecCCeeEEEEeccCCCchhHHhhcccc--------cCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc--
Q 040814 459 MGCSLHGAERILVYEFMPNKSLDFFIFDSVK--------KKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN-- 528 (664)
Q Consensus 459 ~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~--------~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~-- 528 (664)
++++..++..++||||+++++|.+++..... ...+++.++..++.||+.||.|||+.+++|+|+++.|.-
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~ 164 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVG 164 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEc
Confidence 9999999999999999999999999964321 235788999999999999999999999999999988710
Q ss_pred --------------------------cccccCCccchhhhccCCCCccchHHHHHHHHHHHHh--CCCCCCCCCCCCchh
Q 040814 529 --------------------------RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS--GRKNNNCYDEERPLN 580 (664)
Q Consensus 529 --------------------------~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt--G~~p~~~~~~~~~~~ 580 (664)
...++..|+|||...++.++.++|||||||++|||++ |..|+......+...
T Consensus 165 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~ 244 (296)
T cd05095 165 KNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIE 244 (296)
T ss_pred CCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHH
Confidence 0112457999999888889999999999999999998 667775433222111
Q ss_pred hhhhHHhcCChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhc
Q 040814 581 LVGYLWKEGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQ 638 (664)
Q Consensus 581 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 638 (664)
.....+.... .....+.+......+.+++.+||+.||++||++.+|++.|++
T Consensus 245 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 245 NTGEFFRDQG------RQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred HHHHHHhhcc------ccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 0000000000 000111122344678889999999999999999999999864
No 145
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.94 E-value=1.4e-26 Score=239.18 Aligned_cols=197 Identities=24% Similarity=0.311 Sum_probs=153.9
Q ss_pred eccCCCcCEEEEEEcC-CcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEEeccCCCch
Q 040814 427 LGEGGFGPVYKGKLLD-GQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVYEFMPNKSL 480 (664)
Q Consensus 427 lg~G~fg~Vy~~~~~~-~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~Ey~~~gsL 480 (664)
||+|+||.||++..+. |+.+|+|++.. +++++.+++..+...++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 7999999999999754 89999998742 268888999999999999999999999
Q ss_pred hHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-------------------------ccccccCC
Q 040814 481 DFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-------------------------NRVVGTYG 535 (664)
Q Consensus 481 ~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-------------------------~~~~Gt~~ 535 (664)
..++... ....+++..+..++.||+.||.|||+.+++|+|+++.|. ....|+..
T Consensus 81 ~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~ 159 (277)
T cd05607 81 KYHIYNV-GERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNG 159 (277)
T ss_pred HHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCCCC
Confidence 9888543 234689999999999999999999999999999998771 12357889
Q ss_pred ccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCC---CHHHHHHHH
Q 040814 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPC---PENELLRCI 612 (664)
Q Consensus 536 Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~~~~l~ 612 (664)
|+|||++.+..++.++|||||||++|||++|+.||......... .++......... ......++.
T Consensus 160 y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~ 227 (277)
T cd05607 160 YMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAK------------EELKRRTLEDEVKFEHQNFTEESK 227 (277)
T ss_pred ccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhH------------HHHHHHhhccccccccccCCHHHH
Confidence 99999999888999999999999999999999998643321111 011111111110 012234567
Q ss_pred HHHHhcccccCCCCCCHHHHHHHH
Q 040814 613 HAGLLCVHDQAVNRPTMADVVSCL 636 (664)
Q Consensus 613 ~l~~~Cl~~dP~~RPt~~evl~~L 636 (664)
+++.+||+.||++||++.|+++.+
T Consensus 228 ~li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 228 DICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred HHHHHHhccCHhhCCCCccchhhh
Confidence 888889999999999997766443
No 146
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.94 E-value=1.9e-26 Score=234.79 Aligned_cols=207 Identities=24% Similarity=0.321 Sum_probs=163.6
Q ss_pred hcCccccceeccCCCcCEEEEEEcCCcEEEEEeccc---------------------ceEEEEeEeecCCeeEEEEeccC
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLLDGQVIAVKRLSG---------------------RTIRLMGCSLHGAERILVYEFMP 476 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~---------------------~~v~l~g~~~~~~~~~lV~Ey~~ 476 (664)
.++|+..+.||+|+||.||+|.. .++.||+|.+.. +++++++++..+...++||||++
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 83 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDY-RGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA 83 (256)
T ss_pred hhhccceeeeecCCCceEEEEEe-cCcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecC
Confidence 35678889999999999999987 478899998853 36889999998899999999999
Q ss_pred CCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-----------------------cccccc
Q 040814 477 NKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-----------------------NRVVGT 533 (664)
Q Consensus 477 ~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-----------------------~~~~Gt 533 (664)
+++|.+++... ....+++..+..++.|++.||.|||+.+++|.|+++.|. ....++
T Consensus 84 ~~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 162 (256)
T cd05039 84 KGSLVDYLRSR-GRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLP 162 (256)
T ss_pred CCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccccccccCCCc
Confidence 99999999542 223799999999999999999999999999999998871 011234
Q ss_pred CCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHH
Q 040814 534 YGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRCI 612 (664)
Q Consensus 534 ~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~ 612 (664)
..|+|||++....++.++||||||+++|||++ |+.||......+. .. ... .......+......+.
T Consensus 163 ~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~---~~-~~~---------~~~~~~~~~~~~~~~~ 229 (256)
T cd05039 163 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV---VP-HVE---------KGYRMEAPEGCPPEVY 229 (256)
T ss_pred ccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHH---HH-HHh---------cCCCCCCccCCCHHHH
Confidence 56999999998889999999999999999997 9998754321111 10 001 0111122223346678
Q ss_pred HHHHhcccccCCCCCCHHHHHHHHhcc
Q 040814 613 HAGLLCVHDQAVNRPTMADVVSCLRQN 639 (664)
Q Consensus 613 ~l~~~Cl~~dP~~RPt~~evl~~L~~~ 639 (664)
+++.+||+.+|++|||+++++++|+++
T Consensus 230 ~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 230 KVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred HHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 889999999999999999999999753
No 147
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.94 E-value=3.2e-27 Score=249.55 Aligned_cols=187 Identities=21% Similarity=0.243 Sum_probs=151.8
Q ss_pred ceeccCCCcCEEEEEEc-CCcEEEEEeccc--------------------------ceEEEEeEeecCCeeEEEEeccCC
Q 040814 425 NKLGEGGFGPVYKGKLL-DGQVIAVKRLSG--------------------------RTIRLMGCSLHGAERILVYEFMPN 477 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~--------------------------~~v~l~g~~~~~~~~~lV~Ey~~~ 477 (664)
+.||+|+||.||+|+.. +++.||+|++.+ +++++++.+...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999985 589999998742 257888888889999999999999
Q ss_pred CchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------cccc
Q 040814 478 KSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NRVV 531 (664)
Q Consensus 478 gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~~~ 531 (664)
|+|..++. +...+++..+..++.||+.||.|||+.+++|+|+++.|. ....
T Consensus 81 g~L~~~l~---~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (323)
T cd05575 81 GELFFHLQ---RERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFC 157 (323)
T ss_pred CCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCcccccc
Confidence 99999884 345789999999999999999999999999999988761 1235
Q ss_pred ccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCC--CCCHHHHH
Q 040814 532 GTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDG--PCPENELL 609 (664)
Q Consensus 532 Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~ 609 (664)
||+.|+|||++.+..++.++|||||||++|||++|+.||...+..+ +.+..... ..+.....
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~----------------~~~~i~~~~~~~~~~~~~ 221 (323)
T cd05575 158 GTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAE----------------MYDNILNKPLRLKPNISV 221 (323)
T ss_pred CChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHH----------------HHHHHHcCCCCCCCCCCH
Confidence 8899999999999999999999999999999999999986432111 11111111 12223345
Q ss_pred HHHHHHHhcccccCCCCCCHH
Q 040814 610 RCIHAGLLCVHDQAVNRPTMA 630 (664)
Q Consensus 610 ~l~~l~~~Cl~~dP~~RPt~~ 630 (664)
.+.+++.+||+.||.+||++.
T Consensus 222 ~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 222 SARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred HHHHHHHHHhhcCHHhCCCCC
Confidence 677888899999999999985
No 148
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.94 E-value=1.7e-26 Score=242.95 Aligned_cols=211 Identities=22% Similarity=0.319 Sum_probs=163.7
Q ss_pred hcCccccceeccCCCcCEEEEEEc--------CCcEEEEEeccc------------------------ceEEEEeEeecC
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLL--------DGQVIAVKRLSG------------------------RTIRLMGCSLHG 465 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~--------~~~~vavK~~~~------------------------~~v~l~g~~~~~ 465 (664)
.++|.+.+.||+|+||.||+++.. ....+|+|++.. +++++++++..+
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 356788899999999999999742 245799997652 368999999988
Q ss_pred CeeEEEEeccCCCchhHHhhccc-------------ccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc----
Q 040814 466 AERILVYEFMPNKSLDFFIFDSV-------------KKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN---- 528 (664)
Q Consensus 466 ~~~~lV~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~---- 528 (664)
...++||||+++|+|.+++.... ....+++..+.+++.||+.||.|||+.+++|+|+++.|.-
T Consensus 91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~ 170 (314)
T cd05099 91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTED 170 (314)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCC
Confidence 89999999999999999996532 1246899999999999999999999999999999988710
Q ss_pred ------------------------cccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhh
Q 040814 529 ------------------------RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVG 583 (664)
Q Consensus 529 ------------------------~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~ 583 (664)
...++..|||||.+.+..++.++|||||||++|||++ |..||......+...
T Consensus 171 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~--- 247 (314)
T cd05099 171 NVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFK--- 247 (314)
T ss_pred CcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHH---
Confidence 0012246999999999899999999999999999999 888875432211111
Q ss_pred hHHhcCChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhcccc
Q 040814 584 YLWKEGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQ 641 (664)
Q Consensus 584 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~ 641 (664)
. +........+......+.+++.+||+.+|++|||+.|+++.|+++..
T Consensus 248 ~----------~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 295 (314)
T cd05099 248 L----------LREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA 295 (314)
T ss_pred H----------HHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 0 00111112233344567788999999999999999999999988764
No 149
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.94 E-value=2.1e-26 Score=235.12 Aligned_cols=198 Identities=24% Similarity=0.319 Sum_probs=154.7
Q ss_pred eeccCCCcCEEEEEEc---CCcEEEEEeccc-----------------------ceEEEEeEeecCCeeEEEEeccCCCc
Q 040814 426 KLGEGGFGPVYKGKLL---DGQVIAVKRLSG-----------------------RTIRLMGCSLHGAERILVYEFMPNKS 479 (664)
Q Consensus 426 ~lg~G~fg~Vy~~~~~---~~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV~Ey~~~gs 479 (664)
.||+|+||.||+|.+. ++..||+|++.. +++++++++. .+..++||||+++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 4899999999999863 356799998753 3688999875 457899999999999
Q ss_pred hhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc---------------------------c--c
Q 040814 480 LDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN---------------------------R--V 530 (664)
Q Consensus 480 L~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~---------------------------~--~ 530 (664)
|.+++.. ....+++..+.+++.||+.||.|||+.+.+|+|+++.|.- . .
T Consensus 81 L~~~l~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 158 (257)
T cd05115 81 LNKFLSG--KKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAG 158 (257)
T ss_pred HHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCC
Confidence 9999853 2457999999999999999999999999999999988720 0 0
Q ss_pred cccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHH
Q 040814 531 VGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELL 609 (664)
Q Consensus 531 ~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 609 (664)
.++..|+|||.+.+..++.++|||||||++|||++ |+.||........ ...+........+.....
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~ 225 (257)
T cd05115 159 KWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEV-------------MSFIEQGKRLDCPAECPP 225 (257)
T ss_pred CCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHH-------------HHHHHCCCCCCCCCCCCH
Confidence 11357999999998889999999999999999996 9999864322111 111111112223344456
Q ss_pred HHHHHHHhcccccCCCCCCHHHHHHHHhcc
Q 040814 610 RCIHAGLLCVHDQAVNRPTMADVVSCLRQN 639 (664)
Q Consensus 610 ~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 639 (664)
.+.+++.+||+.+|++||++.+|.+.|+..
T Consensus 226 ~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 226 EMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 777888999999999999999999999764
No 150
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.94 E-value=1.3e-26 Score=237.73 Aligned_cols=206 Identities=21% Similarity=0.292 Sum_probs=158.5
Q ss_pred cCccccceeccCCCcCEEEEEE-cCCcEEEEEeccc----------------------ceEEEEeEeecCCeeEEEEecc
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKL-LDGQVIAVKRLSG----------------------RTIRLMGCSLHGAERILVYEFM 475 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~----------------------~~v~l~g~~~~~~~~~lV~Ey~ 475 (664)
++|++.+.||+|+||.||+|+. .+++.||+|++.. +++++++.+..++..++||||+
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~ 88 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC 88 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence 4688899999999999999997 4588999998752 3688999999999999999999
Q ss_pred CCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------cc
Q 040814 476 PNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NR 529 (664)
Q Consensus 476 ~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~ 529 (664)
++++|.+++. ....+++..+..++.|++.||.|||+.+++|.|+++.|. ..
T Consensus 89 ~~~~L~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~ 165 (267)
T cd06646 89 GGGSLQDIYH---VTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKS 165 (267)
T ss_pred CCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecccccccCc
Confidence 9999999884 345789999999999999999999999999998888761 12
Q ss_pred ccccCCccchhhhc---cCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHH
Q 040814 530 VVGTYGYMAPEYAM---NGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPEN 606 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~---~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 606 (664)
..|+..|+|||.+. ...++.++|||||||++|||++|+.|+......+.... ..... ...+.... ...
T Consensus 166 ~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~----~~~~~---~~~~~~~~--~~~ 236 (267)
T cd06646 166 FIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFL----MSKSN---FQPPKLKD--KTK 236 (267)
T ss_pred cccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhee----eecCC---CCCCCCcc--ccc
Confidence 34678899999984 35578899999999999999999999854322111100 00000 00000100 112
Q ss_pred HHHHHHHHHHhcccccCCCCCCHHHHHHHH
Q 040814 607 ELLRCIHAGLLCVHDQAVNRPTMADVVSCL 636 (664)
Q Consensus 607 ~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L 636 (664)
....+.+++.+||+.+|++|||++++++.|
T Consensus 237 ~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 237 WSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred cCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 235677888899999999999999998743
No 151
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.94 E-value=2.2e-26 Score=236.14 Aligned_cols=208 Identities=23% Similarity=0.306 Sum_probs=160.6
Q ss_pred HHHHhcCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc----------------------ceEEEEeEeecCCeeEE
Q 040814 414 IAAATNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG----------------------RTIRLMGCSLHGAERIL 470 (664)
Q Consensus 414 i~~~t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~----------------------~~v~l~g~~~~~~~~~l 470 (664)
++.+++++.....||+|+||.||+|... ++..||+|.+.. +++++++++..++..++
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 82 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI 82 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence 3456677777789999999999999975 478899998743 36899999999999999
Q ss_pred EEeccCCCchhHHhhcccccCCC--CHHHHHHHHHHHHHHHHHhhhcCccccccccccc---------------------
Q 040814 471 VYEFMPNKSLDFFIFDSVKKKQL--NWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------- 527 (664)
Q Consensus 471 V~Ey~~~gsL~~~l~~~~~~~~l--~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------- 527 (664)
|+||+++++|.+++... ...+ ++..+..++.||+.||.|||+.+++|+|+++.|.
T Consensus 83 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~ 160 (268)
T cd06624 83 FMEQVPGGSLSALLRSK--WGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLA 160 (268)
T ss_pred EEecCCCCCHHHHHHHh--cccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecc
Confidence 99999999999999643 2344 8888999999999999999999999999887761
Q ss_pred ------ccccccCCccchhhhccCC--CCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhh
Q 040814 528 ------NRVVGTYGYMAPEYAMNGI--VSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAAL 599 (664)
Q Consensus 528 ------~~~~Gt~~Y~APE~~~~~~--~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 599 (664)
....|+..|+|||++.+.. ++.++|||||||++|||++|+.|+......... .+. ......
T Consensus 161 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~-----~~~------~~~~~~ 229 (268)
T cd06624 161 GINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAA-----MFK------VGMFKI 229 (268)
T ss_pred cCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhh-----Hhh------hhhhcc
Confidence 0123678899999987643 889999999999999999999998543211100 000 000011
Q ss_pred CCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 600 DGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
....+......+.+++.+||+.+|++|||+.|+++
T Consensus 230 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 230 HPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred CCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 12233344556788889999999999999999875
No 152
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.94 E-value=2e-26 Score=236.52 Aligned_cols=207 Identities=22% Similarity=0.301 Sum_probs=161.2
Q ss_pred CccccceeccCCCcCEEEEEEcC--CcEEEEEecc---------------------------------cceEEEEeEeec
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLLD--GQVIAVKRLS---------------------------------GRTIRLMGCSLH 464 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~~--~~~vavK~~~---------------------------------~~~v~l~g~~~~ 464 (664)
+|++.+.||+|+||.||+|.... ++.+|+|.+. ++++++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47778999999999999999865 6889999652 246889999999
Q ss_pred CCeeEEEEeccCCCchhHHhhcc-cccCCCCHHHHHHHHHHHHHHHHHhhh-cCccccccccccc---------------
Q 040814 465 GAERILVYEFMPNKSLDFFIFDS-VKKKQLNWSKRITIIEGIAQGLIYLHK-YSRLRMNESKVNT--------------- 527 (664)
Q Consensus 465 ~~~~~lV~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~I~~~ia~gL~yLH~-~~~~h~d~~~~n~--------------- 527 (664)
++..++||||+++++|.+++... .....+++..+++++.|++.||.|||+ .+.+|.|+++.|.
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~ 160 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGL 160 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccc
Confidence 99999999999999999988542 234579999999999999999999996 6789998887761
Q ss_pred ----------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhh
Q 040814 528 ----------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEA 597 (664)
Q Consensus 528 ----------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 597 (664)
....|+..|+|||.+.+..++.++||||||+++|||++|+.||....... ... .+.+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~---~~~---------~~~~~ 228 (269)
T cd08528 161 AKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLS---LAT---------KIVEA 228 (269)
T ss_pred eeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHH---HHH---------HHhhc
Confidence 13457889999999998889999999999999999999999975322111 110 01111
Q ss_pred hhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhc
Q 040814 598 ALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQ 638 (664)
Q Consensus 598 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 638 (664)
.............+.+++.+||+.||++||++.||..+|+.
T Consensus 229 ~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~ 269 (269)
T cd08528 229 VYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD 269 (269)
T ss_pred cCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence 11100011223557788889999999999999999999863
No 153
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.94 E-value=1.9e-26 Score=236.65 Aligned_cols=206 Identities=24% Similarity=0.358 Sum_probs=161.7
Q ss_pred cCccccceeccCCCcCEEEEEEcC----CcEEEEEeccc-----------------------ceEEEEeEeecCCeeEEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD----GQVIAVKRLSG-----------------------RTIRLMGCSLHGAERILV 471 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~----~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV 471 (664)
++|++.+.||+|+||.||+|.... +..+|+|.++. +++++++++.+++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 467888999999999999998642 34799998742 368999999999999999
Q ss_pred EeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc-----------------------
Q 040814 472 YEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN----------------------- 528 (664)
Q Consensus 472 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~----------------------- 528 (664)
|||+++++|.+++.. ....+++.++..|+.|++.||.|||+.+.+|+|+++.|.-
T Consensus 84 ~e~~~~~~L~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd05066 84 TEYMENGSLDAFLRK--HDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 161 (267)
T ss_pred EEcCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccccccc
Confidence 999999999999953 2356899999999999999999999999999999987710
Q ss_pred ------cccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCC
Q 040814 529 ------RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDG 601 (664)
Q Consensus 529 ------~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 601 (664)
...++..|+|||++.+..++.++|||||||++||+++ |+.||......+.. ... .++ ...
T Consensus 162 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~---~~~-~~~---------~~~ 228 (267)
T cd05066 162 AAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVI---KAI-EEG---------YRL 228 (267)
T ss_pred eeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHH---HHH-hCC---------CcC
Confidence 0011346999999998899999999999999999887 99998644322111 100 110 111
Q ss_pred CCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhcc
Q 040814 602 PCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQN 639 (664)
Q Consensus 602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 639 (664)
+.+...+..+.+++.+||+.+|.+||+|.++++.|+++
T Consensus 229 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 229 PAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred CCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 12223345678889999999999999999999999764
No 154
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.94 E-value=1.1e-26 Score=245.56 Aligned_cols=193 Identities=20% Similarity=0.282 Sum_probs=154.6
Q ss_pred ceeccCCCcCEEEEEE----cCCcEEEEEeccc--------------------------ceEEEEeEeecCCeeEEEEec
Q 040814 425 NKLGEGGFGPVYKGKL----LDGQVIAVKRLSG--------------------------RTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~----~~~~~vavK~~~~--------------------------~~v~l~g~~~~~~~~~lV~Ey 474 (664)
+.||+|+||.||+++. ..++.||||++.+ +++++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 6899999999999985 2478999998742 368899999999999999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc--------------------------cc
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN--------------------------TN 528 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n--------------------------~~ 528 (664)
+++|+|.+++. +...+.+..+..++.||+.||.|||+.+++|+|+++.| ..
T Consensus 82 ~~~~~L~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (323)
T cd05584 82 LSGGELFMHLE---REGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTH 158 (323)
T ss_pred CCCchHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCccc
Confidence 99999999984 34678899999999999999999999999999999877 11
Q ss_pred cccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHH
Q 040814 529 RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENEL 608 (664)
Q Consensus 529 ~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 608 (664)
...||+.|+|||++.+..++.++|||||||++|||++|+.||...+.... .. .+... ....+....
T Consensus 159 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~---~~---------~~~~~--~~~~~~~~~ 224 (323)
T cd05584 159 TFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKT---ID---------KILKG--KLNLPPYLT 224 (323)
T ss_pred ccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHH---HH---------HHHcC--CCCCCCCCC
Confidence 23588999999999988899999999999999999999999864332111 10 11111 112233334
Q ss_pred HHHHHHHHhcccccCCCCC-----CHHHHHH
Q 040814 609 LRCIHAGLLCVHDQAVNRP-----TMADVVS 634 (664)
Q Consensus 609 ~~l~~l~~~Cl~~dP~~RP-----t~~evl~ 634 (664)
..+.+++.+||+.+|++|| ++.++++
T Consensus 225 ~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 225 PEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred HHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 5677888899999999999 7888765
No 155
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.94 E-value=2.7e-27 Score=250.36 Aligned_cols=194 Identities=20% Similarity=0.200 Sum_probs=154.8
Q ss_pred ceeccCCCcCEEEEEEc-CCcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEEeccCCC
Q 040814 425 NKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVYEFMPNK 478 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~Ey~~~g 478 (664)
+.||+|+||.||++... +++.||+|++.+ +++++.+++..++..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999974 589999998853 2577888888999999999999999
Q ss_pred chhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhh-cCccccccccccc--------------------------cccc
Q 040814 479 SLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK-YSRLRMNESKVNT--------------------------NRVV 531 (664)
Q Consensus 479 sL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~-~~~~h~d~~~~n~--------------------------~~~~ 531 (664)
+|..++. +...+++..+..++.||+.||.|||+ .+++|+|+++.|. ....
T Consensus 81 ~L~~~l~---~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 157 (325)
T cd05594 81 ELFFHLS---RERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC 157 (325)
T ss_pred cHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCccccccc
Confidence 9998884 34579999999999999999999997 7999999999871 1235
Q ss_pred ccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHH
Q 040814 532 GTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRC 611 (664)
Q Consensus 532 Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l 611 (664)
||+.|||||++.+..++.++|||||||++|||++|+.||...........+ .. . ....+......+
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i---~~---------~--~~~~p~~~~~~~ 223 (325)
T cd05594 158 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI---LM---------E--EIRFPRTLSPEA 223 (325)
T ss_pred CCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHH---hc---------C--CCCCCCCCCHHH
Confidence 889999999999999999999999999999999999998643322111100 00 0 111222334457
Q ss_pred HHHHHhcccccCCCCC-----CHHHHHHH
Q 040814 612 IHAGLLCVHDQAVNRP-----TMADVVSC 635 (664)
Q Consensus 612 ~~l~~~Cl~~dP~~RP-----t~~evl~~ 635 (664)
.+++.+||+.||++|+ ++.++++.
T Consensus 224 ~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 224 KSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred HHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 7888889999999996 89988754
No 156
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.94 E-value=1.6e-26 Score=238.94 Aligned_cols=212 Identities=21% Similarity=0.302 Sum_probs=161.9
Q ss_pred cHHHHHHHhcCccccceeccCCCcCEEEEEEc-CCcEEEEEecc----------------------cceEEEEeEeec--
Q 040814 410 NFQTIAAATNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLS----------------------GRTIRLMGCSLH-- 464 (664)
Q Consensus 410 ~~~~i~~~t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~----------------------~~~v~l~g~~~~-- 464 (664)
++.++..+.+.|++.+.||+|+||.||+|... +++.+|+|.+. ++++++++++..
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~ 86 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKS 86 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhccc
Confidence 55566667789999999999999999999984 48899999763 236888888753
Q ss_pred ----CCeeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc--------------
Q 040814 465 ----GAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN-------------- 526 (664)
Q Consensus 465 ----~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n-------------- 526 (664)
....+++|||+++|+|.+++... ....+++..+..++.||+.||.|||+.+++|.++++.|
T Consensus 87 ~~~~~~~~~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~df 165 (282)
T cd06636 87 PPGHDDQLWLVMEFCGAGSVTDLVKNT-KGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDF 165 (282)
T ss_pred ccCCCCEEEEEEEeCCCCcHHHHHHHc-cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeC
Confidence 45789999999999999998542 24568899999999999999999999999999888766
Q ss_pred ------------cccccccCCccchhhhc-----cCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcC
Q 040814 527 ------------TNRVVGTYGYMAPEYAM-----NGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEG 589 (664)
Q Consensus 527 ------------~~~~~Gt~~Y~APE~~~-----~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 589 (664)
.....|+..|+|||.+. +..++.++|||||||++|||++|+.||..........
T Consensus 166 g~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~--------- 236 (282)
T cd06636 166 GVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALF--------- 236 (282)
T ss_pred cchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhh---------
Confidence 11234778899999985 3568889999999999999999999986432211110
Q ss_pred ChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 590 KASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 590 ~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
.+................+.+++.+||+.||.+|||+.|+++
T Consensus 237 ---~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 237 ---LIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred ---hHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 000000001111123456788888999999999999999875
No 157
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.94 E-value=1.5e-26 Score=237.49 Aligned_cols=206 Identities=24% Similarity=0.369 Sum_probs=160.9
Q ss_pred cCccccceeccCCCcCEEEEEEcC-C---cEEEEEeccc-----------------------ceEEEEeEeecCCeeEEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD-G---QVIAVKRLSG-----------------------RTIRLMGCSLHGAERILV 471 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~-~---~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV 471 (664)
.+|++.+.||+|+||.||+|.... + ..||||.+.. +++++.+++..+...++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 347788999999999999999753 3 3699998753 368999999999999999
Q ss_pred EeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccccc----------------------
Q 040814 472 YEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTNR---------------------- 529 (664)
Q Consensus 472 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~~---------------------- 529 (664)
|||+++++|.+++.. ....+++.++..++.|++.||.|||+.+.+|.|+++.|.-.
T Consensus 84 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~ 161 (269)
T cd05065 84 TEFMENGALDSFLRQ--NDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS 161 (269)
T ss_pred EecCCCCcHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCcc
Confidence 999999999999853 24578999999999999999999999999999998876100
Q ss_pred ---c---c---ccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhh
Q 040814 530 ---V---V---GTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAAL 599 (664)
Q Consensus 530 ---~---~---Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 599 (664)
. . .+..|+|||.+.+..++.++|||||||++|||++ |+.||......+. .... ....
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~---~~~i----------~~~~ 228 (269)
T cd05065 162 DPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV---INAI----------EQDY 228 (269)
T ss_pred ccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHH---HHHH----------HcCC
Confidence 0 0 1236999999999999999999999999999987 9999864332211 1100 0111
Q ss_pred CCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhcc
Q 040814 600 DGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQN 639 (664)
Q Consensus 600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 639 (664)
..+.+.+.+..+.+++.+||+.+|.+||++.+|+.+|++.
T Consensus 229 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 229 RLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1122233445678889999999999999999999999764
No 158
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.94 E-value=3.1e-26 Score=237.10 Aligned_cols=218 Identities=22% Similarity=0.303 Sum_probs=159.3
Q ss_pred cCccccceeccCCCcCEEEEEEc-----CCcEEEEEeccc----------------------ceEEEEeEeec--CCeeE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-----DGQVIAVKRLSG----------------------RTIRLMGCSLH--GAERI 469 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-----~~~~vavK~~~~----------------------~~v~l~g~~~~--~~~~~ 469 (664)
++|++.+.||+|+||.||++..+ +++.||+|++.. +++++.+++.. ....+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 46788899999999999999853 478999999752 36888887754 34678
Q ss_pred EEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc---------------------
Q 040814 470 LVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN--------------------- 528 (664)
Q Consensus 470 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~--------------------- 528 (664)
+|+||+++|+|.+++... ...+++..+..++.|++.||.|||+.+++|+|+++.|.-
T Consensus 84 lv~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 161 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKH--RERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQD 161 (284)
T ss_pred EEEEecCCCCHHHHHHhc--CcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccCC
Confidence 999999999999998532 346899999999999999999999999999999988710
Q ss_pred --------cccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHh-cCC---hhHhhh
Q 040814 529 --------RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWK-EGK---ASELME 596 (664)
Q Consensus 529 --------~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~-~~~---~~~~~d 596 (664)
...++..|+|||.+.+..++.++|||||||++|||++|..++...... ....+..... ... ..+.+.
T Consensus 162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 240 (284)
T cd05081 162 KEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE-FMRMMGNDKQGQMIVYHLIELLK 240 (284)
T ss_pred CcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh-hhhhcccccccccchHHHHHHHh
Confidence 001123499999999889999999999999999999988765322110 0000000000 000 011111
Q ss_pred hhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhcc
Q 040814 597 AALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQN 639 (664)
Q Consensus 597 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 639 (664)
.....+.+......+.+++.+||+.+|++|||+.||+++|+.+
T Consensus 241 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 241 NNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred cCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 1111122233445688899999999999999999999999865
No 159
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.94 E-value=1.7e-26 Score=239.33 Aligned_cols=210 Identities=23% Similarity=0.272 Sum_probs=162.0
Q ss_pred cCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-----------------------ceEEEEeEeecCCeeEEEEec
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-----------------------RTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV~Ey 474 (664)
++|++.+.||+|+||.||++... +++.||+|++.. +++++++++...+..++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 56777899999999999999975 488999997642 368899999999999999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhh-cCcccccccccc------------------------ccc
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK-YSRLRMNESKVN------------------------TNR 529 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~-~~~~h~d~~~~n------------------------~~~ 529 (664)
+++++|..++. +.+.+++..+..++.+++.||.|||+ .+++|+++++.| ...
T Consensus 85 ~~~~~L~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~ 161 (284)
T cd06620 85 MDCGSLDRIYK---KGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADT 161 (284)
T ss_pred CCCCCHHHHHH---hccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhccCc
Confidence 99999999884 34579999999999999999999997 588999888766 112
Q ss_pred ccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhC---CCCCH-
Q 040814 530 VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALD---GPCPE- 605 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~- 605 (664)
..|+..|+|||++.+..++.++|||||||++|||++|+.||............ .....+....... ...+.
T Consensus 162 ~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd06620 162 FVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDD-----PMGILDLLQQIVQEPPPRLPSS 236 (284)
T ss_pred cccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhh-----hhHHHHHHHHHhhccCCCCCch
Confidence 35788999999998889999999999999999999999998754332110000 0001111111111 11111
Q ss_pred HHHHHHHHHHHhcccccCCCCCCHHHHHHHH
Q 040814 606 NELLRCIHAGLLCVHDQAVNRPTMADVVSCL 636 (664)
Q Consensus 606 ~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L 636 (664)
.....+.+++.+||+.||++|||+.|++++.
T Consensus 237 ~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 237 DFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred hcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 2345677888899999999999999999874
No 160
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.94 E-value=1.8e-26 Score=234.85 Aligned_cols=202 Identities=18% Similarity=0.185 Sum_probs=160.4
Q ss_pred CccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-----------------------ceEEEEeEeecCCeeEEEEecc
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-----------------------RTIRLMGCSLHGAERILVYEFM 475 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV~Ey~ 475 (664)
+|++.+.||+|+||.||++... +++.+|+|.++. +++++.+.+..++..++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4778899999999999999975 488999998732 3688999999999999999999
Q ss_pred CCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------cc
Q 040814 476 PNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NR 529 (664)
Q Consensus 476 ~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~ 529 (664)
++|+|.+++... ....+++.....++.||+.||.|||+.+++|.|+++.|. ..
T Consensus 81 ~~~~l~~~~~~~-~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (255)
T cd08219 81 DGGDLMQKIKLQ-RGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACT 159 (255)
T ss_pred CCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeeccccccccc
Confidence 999999988532 345689999999999999999999999999999988771 12
Q ss_pred ccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHH
Q 040814 530 VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELL 609 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 609 (664)
..|++.|+|||++.+..++.++||||||+++|||++|+.||...+... ... ....+. ....+.....
T Consensus 160 ~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~---~~~-~~~~~~---------~~~~~~~~~~ 226 (255)
T cd08219 160 YVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKN---LIL-KVCQGS---------YKPLPSHYSY 226 (255)
T ss_pred ccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHH---HHH-HHhcCC---------CCCCCcccCH
Confidence 347778999999998889999999999999999999999986432111 110 011111 1112223344
Q ss_pred HHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 610 RCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 610 ~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
.+.+++.+||+.||++|||+.+|+..
T Consensus 227 ~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 227 ELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred HHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 57788889999999999999999864
No 161
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.94 E-value=6.7e-27 Score=252.58 Aligned_cols=203 Identities=19% Similarity=0.201 Sum_probs=156.0
Q ss_pred cCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVY 472 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~ 472 (664)
++|++.+.||+|+||.||++... +++.||||++.+ +++++++++.++...++||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 47888999999999999999874 589999998732 3689999999999999999
Q ss_pred eccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc------------------------
Q 040814 473 EFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN------------------------ 528 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~------------------------ 528 (664)
||+++|+|.+++. +...+++..+..++.|++.||+|||+.+++|+|+++.|.-
T Consensus 81 E~~~gg~L~~~l~---~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 157 (377)
T cd05629 81 EFLPGGDLMTMLI---KYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDS 157 (377)
T ss_pred eCCCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccccccccccc
Confidence 9999999999984 3467899999999999999999999999999999887610
Q ss_pred -------------------------------------------------cccccCCccchhhhccCCCCccchHHHHHHH
Q 040814 529 -------------------------------------------------RVVGTYGYMAPEYAMNGIVSMKADVFSFGVL 559 (664)
Q Consensus 529 -------------------------------------------------~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvv 559 (664)
..+||+.|+|||++.+..++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi 237 (377)
T cd05629 158 AYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAI 237 (377)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchh
Confidence 1358999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCC---CCHHHHHHH
Q 040814 560 LLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNR---PTMADVVSC 635 (664)
Q Consensus 560 L~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~R---Pt~~evl~~ 635 (664)
+|||++|+.||......+... ....... .+.-+........+.+++.+|++ +|.+| +++.|+++.
T Consensus 238 l~elltG~~Pf~~~~~~~~~~---~i~~~~~-------~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h 305 (377)
T cd05629 238 MFECLIGWPPFCSENSHETYR---KIINWRE-------TLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH 305 (377)
T ss_pred hhhhhcCCCCCCCCCHHHHHH---HHHccCC-------ccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence 999999999986433221110 0000000 00000011122345566667886 66655 699998764
No 162
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.94 E-value=2.2e-26 Score=235.11 Aligned_cols=202 Identities=21% Similarity=0.297 Sum_probs=161.2
Q ss_pred cCccccceeccCCCcCEEEEEEc-CCcEEEEEecc---------------------------cceEEEEeEeecCCeeEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLS---------------------------GRTIRLMGCSLHGAERIL 470 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~---------------------------~~~v~l~g~~~~~~~~~l 470 (664)
++|+..+.||+|++|.||++... +++.||+|.+. ++++++++++..++..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 57888999999999999999874 48999999763 236899999999999999
Q ss_pred EEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-----------------------
Q 040814 471 VYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT----------------------- 527 (664)
Q Consensus 471 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~----------------------- 527 (664)
|+||+++++|.+++. +...+++..+..++.|++.||.|||+.+++|+|+++.|.
T Consensus 82 v~e~~~~~~l~~~~~---~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~ 158 (263)
T cd06625 82 FMEYMPGGSVKDQLK---AYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTIC 158 (263)
T ss_pred EEEECCCCcHHHHHH---HhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceeccccc
Confidence 999999999999984 345789999999999999999999999999999887761
Q ss_pred ------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCC
Q 040814 528 ------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDG 601 (664)
Q Consensus 528 ------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 601 (664)
....|+..|+|||++.+..++.++||||||+++|||++|+.||........ .. .........
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~---~~---------~~~~~~~~~ 226 (263)
T cd06625 159 SSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAA---IF---------KIATQPTNP 226 (263)
T ss_pred cccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHH---HH---------HHhccCCCC
Confidence 113356789999999998899999999999999999999999854321111 00 011111112
Q ss_pred CCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 602 PCPENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
..+......+.+++.+||+.+|.+|||+.|+++.
T Consensus 227 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 227 QLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred CCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 2333344567788889999999999999999864
No 163
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.94 E-value=1.4e-26 Score=239.93 Aligned_cols=215 Identities=22% Similarity=0.282 Sum_probs=162.9
Q ss_pred cHHHHHHHhcCccccceeccCCCcCEEEEEEcC-CcEEEEEeccc----------------------ceEEEEeEee---
Q 040814 410 NFQTIAAATNNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG----------------------RTIRLMGCSL--- 463 (664)
Q Consensus 410 ~~~~i~~~t~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~----------------------~~v~l~g~~~--- 463 (664)
.++.+..+.++|++.+.||+|+||.||++.... ++.+|+|++.. +++++++++.
T Consensus 9 ~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 88 (286)
T cd06638 9 IFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKD 88 (286)
T ss_pred EeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecc
Confidence 345566788999999999999999999999754 88999998642 3688888874
Q ss_pred --cCCeeEEEEeccCCCchhHHhhccc-ccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-------------
Q 040814 464 --HGAERILVYEFMPNKSLDFFIFDSV-KKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------- 527 (664)
Q Consensus 464 --~~~~~~lV~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------- 527 (664)
.++..++||||+++++|.+++.... ....+++..+..++.|+++||.|||+.+++|+|+++.|.
T Consensus 89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~df 168 (286)
T cd06638 89 VKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDF 168 (286)
T ss_pred cCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccC
Confidence 3456899999999999999885422 345789999999999999999999999999998887761
Q ss_pred -------------ccccccCCccchhhhcc-----CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcC
Q 040814 528 -------------NRVVGTYGYMAPEYAMN-----GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEG 589 (664)
Q Consensus 528 -------------~~~~Gt~~Y~APE~~~~-----~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 589 (664)
....|++.|+|||++.. ..++.++|||||||++|||++|+.|+......... . . ....
T Consensus 169 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~--~-~-~~~~ 244 (286)
T cd06638 169 GVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRAL--F-K-IPRN 244 (286)
T ss_pred CceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHH--h-h-cccc
Confidence 12347889999999853 45789999999999999999999998643321111 0 0 0000
Q ss_pred ChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 590 KASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 590 ~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
.. +.. ..+......+.+++.+||+.+|++|||+.||++.
T Consensus 245 ~~-----~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 245 PP-----PTL--HQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred CC-----Ccc--cCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 00 000 0111223457788899999999999999999874
No 164
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.94 E-value=2.6e-26 Score=240.34 Aligned_cols=214 Identities=19% Similarity=0.253 Sum_probs=156.8
Q ss_pred hcCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-----------------------ceEEEEeEeecCCeeEEEEe
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-----------------------RTIRLMGCSLHGAERILVYE 473 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV~E 473 (664)
.++|++.+.||+|+||.||+|+.. +++.||||++.. +++++++++..+...++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 468999999999999999999985 589999998752 36889999999999999999
Q ss_pred ccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------
Q 040814 474 FMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-------------------------- 527 (664)
Q Consensus 474 y~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-------------------------- 527 (664)
|++ ++|.+++.. ....+++..+..++.||+.||.|||+.+++|+|+++.|.
T Consensus 84 ~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 160 (303)
T cd07869 84 YVH-TDLCQYMDK--HPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTY 160 (303)
T ss_pred CCC-cCHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCccC
Confidence 996 577777743 235689999999999999999999999999999998771
Q ss_pred ccccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCC-chhhhhhHHhcCCh------hHh--hhh
Q 040814 528 NRVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEER-PLNLVGYLWKEGKA------SEL--MEA 597 (664)
Q Consensus 528 ~~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~-~~~~~~~~~~~~~~------~~~--~d~ 597 (664)
....||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ....+......... ... .++
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (303)
T cd07869 161 SNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKP 240 (303)
T ss_pred CCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcccccc
Confidence 12346788999999875 458999999999999999999999997543211 11111000000000 000 000
Q ss_pred -hhCCCCCH---------HHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 598 -ALDGPCPE---------NELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 598 -~~~~~~~~---------~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
......+. .....+.+++.+|++.||++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 241 ERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred ccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 00000000 01234667888899999999999999985
No 165
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.94 E-value=2.8e-26 Score=233.83 Aligned_cols=199 Identities=28% Similarity=0.387 Sum_probs=155.2
Q ss_pred ceeccCCCcCEEEEEEcC----CcEEEEEeccc-----------------------ceEEEEeEeecCCeeEEEEeccCC
Q 040814 425 NKLGEGGFGPVYKGKLLD----GQVIAVKRLSG-----------------------RTIRLMGCSLHGAERILVYEFMPN 477 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~~----~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV~Ey~~~ 477 (664)
++||+|+||.||+|.... +..+|+|.+.. +++++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 479999999999998632 26899998753 2578888765 5568999999999
Q ss_pred CchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc-----------------------------
Q 040814 478 KSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN----------------------------- 528 (664)
Q Consensus 478 gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~----------------------------- 528 (664)
|+|.+++.. ...+++..+..++.|++.||.|||..+.+|.|+++.|.-
T Consensus 80 ~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~ 156 (257)
T cd05060 80 GPLLKYLKK---RREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATT 156 (257)
T ss_pred CcHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCccccccc
Confidence 999999953 347899999999999999999999999999999988710
Q ss_pred cccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHH
Q 040814 529 RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENE 607 (664)
Q Consensus 529 ~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 607 (664)
...++..|+|||.+.+..++.++|||||||++|||++ |+.||......+ ..... ... .....+...
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~---~~~~~-~~~---------~~~~~~~~~ 223 (257)
T cd05060 157 AGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAE---VIAML-ESG---------ERLPRPEEC 223 (257)
T ss_pred CccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHH---HHHHH-HcC---------CcCCCCCCC
Confidence 0012356999999998899999999999999999998 999986443211 11111 111 111223334
Q ss_pred HHHHHHHHHhcccccCCCCCCHHHHHHHHhccc
Q 040814 608 LLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNN 640 (664)
Q Consensus 608 ~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 640 (664)
...+.+++.+||+.+|++||++.++++.|+++.
T Consensus 224 ~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 224 PQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred CHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 456788999999999999999999999998764
No 166
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.94 E-value=4.5e-26 Score=235.19 Aligned_cols=199 Identities=24% Similarity=0.331 Sum_probs=160.8
Q ss_pred CccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-----------------------ceEEEEeEeecCCeeEEEEecc
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-----------------------RTIRLMGCSLHGAERILVYEFM 475 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV~Ey~ 475 (664)
.|+..+.||+|+||.||+|... +++.||+|.+.. +++++++++..+...++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 4667789999999999999975 488999998742 3689999999999999999999
Q ss_pred CCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------cc
Q 040814 476 PNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NR 529 (664)
Q Consensus 476 ~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~ 529 (664)
++++|.+++. ...+++.....++.|++.||.|||+.+.+|.++++.|. ..
T Consensus 85 ~~~~L~~~i~----~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 160 (277)
T cd06640 85 GGGSALDLLR----AGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT 160 (277)
T ss_pred CCCcHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCcccccc
Confidence 9999999883 35689999999999999999999999999999888761 11
Q ss_pred ccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHH
Q 040814 530 VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELL 609 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 609 (664)
..++..|+|||++.+..++.++|||||||++|||++|+.|+......... ...........+.....
T Consensus 161 ~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~ 227 (277)
T cd06640 161 FVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVL-------------FLIPKNNPPTLTGEFSK 227 (277)
T ss_pred ccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHh-------------hhhhcCCCCCCchhhhH
Confidence 24677899999999888999999999999999999999998643322111 01111111223344566
Q ss_pred HHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 610 RCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 610 ~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
.+.+++.+||+.+|++||++.++++.
T Consensus 228 ~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 228 PFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred HHHHHHHHHcccCcccCcCHHHHHhC
Confidence 78889999999999999999999765
No 167
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.94 E-value=2.9e-26 Score=235.73 Aligned_cols=203 Identities=24% Similarity=0.307 Sum_probs=156.4
Q ss_pred ceeccCCCcCEEEEEEcC-Cc--EEEEEeccc------------------------ceEEEEeEeecCCeeEEEEeccCC
Q 040814 425 NKLGEGGFGPVYKGKLLD-GQ--VIAVKRLSG------------------------RTIRLMGCSLHGAERILVYEFMPN 477 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~~-~~--~vavK~~~~------------------------~~v~l~g~~~~~~~~~lV~Ey~~~ 477 (664)
+.||+|+||.||+|.+.+ +. .+|+|.+.. +++++++++...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 368999999999999854 43 578887752 368899999999999999999999
Q ss_pred CchhHHhhccc-------------ccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc----------------
Q 040814 478 KSLDFFIFDSV-------------KKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN---------------- 528 (664)
Q Consensus 478 gsL~~~l~~~~-------------~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~---------------- 528 (664)
|+|.+++.... ....+++..+..++.|++.||+|||+.+.+|+|+++.|.-
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~ 160 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR 160 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCcc
Confidence 99999996432 1235889999999999999999999999999999988710
Q ss_pred -------c--ccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhh
Q 040814 529 -------R--VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAA 598 (664)
Q Consensus 529 -------~--~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 598 (664)
. ...+..|+|||++....++.++|||||||++|||++ |..||........ .. .+...
T Consensus 161 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~---~~----------~~~~~ 227 (270)
T cd05047 161 GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL---YE----------KLPQG 227 (270)
T ss_pred ccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHH---HH----------HHhCC
Confidence 0 112456999999988889999999999999999997 9999854321111 10 01111
Q ss_pred hCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhccc
Q 040814 599 LDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNN 640 (664)
Q Consensus 599 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 640 (664)
.....+......+.+++.+||+.+|.+|||+.++++.|+++.
T Consensus 228 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 228 YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred CCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 111122233456788999999999999999999999998764
No 168
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.94 E-value=2.8e-26 Score=240.66 Aligned_cols=214 Identities=22% Similarity=0.258 Sum_probs=161.8
Q ss_pred cCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-----------------------ceEEEEeEeecCCeeEEEEec
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-----------------------RTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV~Ey 474 (664)
++|++.+.||+|+||.||++... +++.+|+|.++. +++++++++..++..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 46888999999999999999975 488899998642 368999999999999999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhh-cCccccccccccc------------------------cc
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK-YSRLRMNESKVNT------------------------NR 529 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~-~~~~h~d~~~~n~------------------------~~ 529 (664)
+++++|.+++. +...+++..+..++.||++||.|||+ .+++|+|+++.|. ..
T Consensus 81 ~~~~~L~~~l~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 157 (308)
T cd06615 81 MDGGSLDQVLK---KAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 157 (308)
T ss_pred cCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccccccccccc
Confidence 99999999994 34678999999999999999999997 5899998887761 12
Q ss_pred ccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhc--------------------C
Q 040814 530 VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKE--------------------G 589 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~--------------------~ 589 (664)
..|+..|+|||.+.+..++.++|||||||++|||++|+.||.................. .
T Consensus 158 ~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (308)
T cd06615 158 FVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPM 237 (308)
T ss_pred CCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchh
Confidence 34688999999998888999999999999999999999998643322111111000000 0
Q ss_pred ChhHhhhhhhCC---CCCH-HHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 590 KASELMEAALDG---PCPE-NELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 590 ~~~~~~d~~~~~---~~~~-~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
...+..+..... ..+. .....+.+++.+||+.+|++|||+.||++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 238 AIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred hHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 001111111111 1111 123457889999999999999999999876
No 169
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.94 E-value=1.9e-26 Score=244.04 Aligned_cols=207 Identities=17% Similarity=0.235 Sum_probs=154.5
Q ss_pred ccceeccC--CCcCEEEEEEc-CCcEEEEEeccc------------------------ceEEEEeEeecCCeeEEEEecc
Q 040814 423 TTNKLGEG--GFGPVYKGKLL-DGQVIAVKRLSG------------------------RTIRLMGCSLHGAERILVYEFM 475 (664)
Q Consensus 423 ~~~~lg~G--~fg~Vy~~~~~-~~~~vavK~~~~------------------------~~v~l~g~~~~~~~~~lV~Ey~ 475 (664)
+.++||+| +|++||++... +|+.||+|++.. +++++++++..++..++|||||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 35789999 68899999874 589999998852 3789999999999999999999
Q ss_pred CCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc---------------------------
Q 040814 476 PNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN--------------------------- 528 (664)
Q Consensus 476 ~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~--------------------------- 528 (664)
++|+|.+++... ....+++..+..++.||+.||.|||+.+++|+|+++.|.-
T Consensus 82 ~~~~l~~~~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~ 160 (327)
T cd08227 82 AYGSAKDLICTH-FMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRV 160 (327)
T ss_pred CCCcHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccccccccc
Confidence 999999998542 2345899999999999999999999999999999998720
Q ss_pred ------cccccCCccchhhhcc--CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhh----
Q 040814 529 ------RVVGTYGYMAPEYAMN--GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELME---- 596 (664)
Q Consensus 529 ------~~~Gt~~Y~APE~~~~--~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d---- 596 (664)
...++..|+|||++.+ ..++.++|||||||++|||++|+.||......... ... ..+......+
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~--~~~--~~~~~~~~~~~~~~ 236 (327)
T cd08227 161 VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQML--LEK--LNGTVPCLLDTTTI 236 (327)
T ss_pred cccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHH--HHH--hcCCccccccccch
Confidence 0124556999999976 46899999999999999999999998643221100 000 0000000000
Q ss_pred ---------------hhh-----------------CCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 597 ---------------AAL-----------------DGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 597 ---------------~~~-----------------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
... ..+........+.+++.+||+.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 237 PAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred hhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 000 00011122346778999999999999999999986
No 170
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.94 E-value=2.8e-27 Score=250.72 Aligned_cols=203 Identities=18% Similarity=0.204 Sum_probs=157.3
Q ss_pred cCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVY 472 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~ 472 (664)
++|++.+.||+|+||.||+++.. +++.||+|++++ +++++++++..++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 47889999999999999999975 489999998753 2578888888889999999
Q ss_pred eccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-------------------------
Q 040814 473 EFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------------- 527 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------------- 527 (664)
||+++|+|.+++... ...+++..+..++.||+.||.|||+.+++|+|+++.|.
T Consensus 81 e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~ 158 (330)
T cd05601 81 EYQPGGDLLSLLNRY--EDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMV 158 (330)
T ss_pred CCCCCCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCce
Confidence 999999999999532 35799999999999999999999999999999998871
Q ss_pred --ccccccCCccchhhhc------cCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhh
Q 040814 528 --NRVVGTYGYMAPEYAM------NGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAAL 599 (664)
Q Consensus 528 --~~~~Gt~~Y~APE~~~------~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 599 (664)
....||+.|+|||++. ...++.++|||||||++|||++|+.||......... ........ ..
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~---~~i~~~~~-------~~ 228 (330)
T cd05601 159 NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTY---NNIMNFQR-------FL 228 (330)
T ss_pred eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHH---HHHHcCCC-------cc
Confidence 1125889999999986 456889999999999999999999998643322111 00110000 00
Q ss_pred CCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 600 DGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
..+........+.+++..|++ +|.+|||+.++++
T Consensus 229 ~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 229 KFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred CCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 111111223456677777997 9999999999875
No 171
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.94 E-value=2.2e-26 Score=238.73 Aligned_cols=203 Identities=23% Similarity=0.290 Sum_probs=158.4
Q ss_pred ccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEEec
Q 040814 421 FSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 421 ~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~Ey 474 (664)
|+..+.||+|+||.||++... +++.||||.+.+ +++.+++.+.+++..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 667789999999999999975 489999998743 257888888888999999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-------------------------cc
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-------------------------NR 529 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-------------------------~~ 529 (664)
+++++|.+++... ....+++..+..++.|++.||.|||+.+++|+|+++.|. ..
T Consensus 82 ~~g~~L~~~l~~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05630 82 MNGGDLKFHIYHM-GEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG 160 (285)
T ss_pred cCCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccC
Confidence 9999999988542 234689999999999999999999999999999888761 12
Q ss_pred ccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHH
Q 040814 530 VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELL 609 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 609 (664)
..|+..|+|||++.+..++.++|||||||++|||++|+.||............ ....+. .....+.....
T Consensus 161 ~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~---------~~~~~~-~~~~~~~~~~~ 230 (285)
T cd05630 161 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV---------ERLVKE-VQEEYSEKFSP 230 (285)
T ss_pred CCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHH---------Hhhhhh-hhhhcCccCCH
Confidence 35788999999999999999999999999999999999999653321111000 001100 01112222334
Q ss_pred HHHHHHHhcccccCCCCCC-----HHHHHH
Q 040814 610 RCIHAGLLCVHDQAVNRPT-----MADVVS 634 (664)
Q Consensus 610 ~l~~l~~~Cl~~dP~~RPt-----~~evl~ 634 (664)
.+.+++..||+.||++||| +.|+++
T Consensus 231 ~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 231 DARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred HHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 5677888899999999999 888876
No 172
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.94 E-value=2.5e-26 Score=248.80 Aligned_cols=213 Identities=15% Similarity=0.134 Sum_probs=160.4
Q ss_pred hcCccccceeccCCCcCEEEEEEc-CCcEEEEEecc----------------cceEEEEeEeecCCeeEEEEeccCCCch
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLS----------------GRTIRLMGCSLHGAERILVYEFMPNKSL 480 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~----------------~~~v~l~g~~~~~~~~~lV~Ey~~~gsL 480 (664)
.++|++.+.||+|+||.||++... +++.||+|+.. ++++++++++..+...++|+||+. ++|
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L 169 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQRGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-TDL 169 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhhhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-CCH
Confidence 367999999999999999999974 48999999764 357999999999999999999996 688
Q ss_pred hHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc---------------------------cccccc
Q 040814 481 DFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT---------------------------NRVVGT 533 (664)
Q Consensus 481 ~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~---------------------------~~~~Gt 533 (664)
..++. ....+++..++.|+.||+.||.|||+.+++|+|+++.|. ....||
T Consensus 170 ~~~l~---~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt 246 (391)
T PHA03212 170 YCYLA---AKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAGT 246 (391)
T ss_pred HHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccccccccccCc
Confidence 88874 345789999999999999999999999999999999871 123589
Q ss_pred CCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCC-------chhhhhhHHhc----------CChhHhhh
Q 040814 534 YGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEER-------PLNLVGYLWKE----------GKASELME 596 (664)
Q Consensus 534 ~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~-------~~~~~~~~~~~----------~~~~~~~d 596 (664)
+.|+|||++.+..++.++|||||||++|||++|+.|+....... .+..+...... ....+...
T Consensus 247 ~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~ 326 (391)
T PHA03212 247 IATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYI 326 (391)
T ss_pred cCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHH
Confidence 99999999999999999999999999999999998875332110 11111000000 00000000
Q ss_pred hhh----CC--CCC-----HHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 597 AAL----DG--PCP-----ENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 597 ~~~----~~--~~~-----~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
... .. ..+ ......+.+++.+||+.||++|||++|+++
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 327 GLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred HHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 000 00 000 122346788899999999999999999985
No 173
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.94 E-value=3.1e-26 Score=235.85 Aligned_cols=200 Identities=24% Similarity=0.305 Sum_probs=159.3
Q ss_pred cCccccceeccCCCcCEEEEEEc-CCcEEEEEecc-----------------------cceEEEEeEeecCCeeEEEEec
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLS-----------------------GRTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~-----------------------~~~v~l~g~~~~~~~~~lV~Ey 474 (664)
++|+..+.||.|++|.||+|... +++.||+|.+. ++++++++++..+...++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 46788899999999999999975 48999999874 2368899999999999999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc--------------------------cc
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN--------------------------TN 528 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n--------------------------~~ 528 (664)
+++++|.+++.. ..+++..+..++.|++.||.|||+.+.+|+++++.| ..
T Consensus 81 ~~~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~ 156 (274)
T cd06609 81 CGGGSCLDLLKP----GKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRN 156 (274)
T ss_pred eCCCcHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccccccc
Confidence 999999999842 389999999999999999999999999999888765 11
Q ss_pred cccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHH-H
Q 040814 529 RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPEN-E 607 (664)
Q Consensus 529 ~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~ 607 (664)
...++..|+|||++.+..++.++|||||||++|||++|+.||...+.... .. .... ......+.. .
T Consensus 157 ~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~---~~-~~~~---------~~~~~~~~~~~ 223 (274)
T cd06609 157 TFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRV---LF-LIPK---------NNPPSLEGNKF 223 (274)
T ss_pred cccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHH---HH-Hhhh---------cCCCCCccccc
Confidence 23567789999999988899999999999999999999999864332111 10 0001 111111111 3
Q ss_pred HHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 608 LLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 608 ~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
...+.+++.+||+.+|++|||++++++.
T Consensus 224 ~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 224 SKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred CHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 3457788889999999999999999763
No 174
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.94 E-value=5.5e-27 Score=246.90 Aligned_cols=205 Identities=26% Similarity=0.331 Sum_probs=167.3
Q ss_pred ccccceeccCCCcCEEEEEEcC---C--cEEEEEeccc-----------------------ceEEEEeEeecCCeeEEEE
Q 040814 421 FSTTNKLGEGGFGPVYKGKLLD---G--QVIAVKRLSG-----------------------RTIRLMGCSLHGAERILVY 472 (664)
Q Consensus 421 ~~~~~~lg~G~fg~Vy~~~~~~---~--~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV~ 472 (664)
....++||+|.||.||+|.+.+ | --||||..+. ++|+++|.|.+ ...+|||
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~Wivm 469 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWIVM 469 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeEEE
Confidence 3456889999999999999633 3 3588897754 37999999976 4689999
Q ss_pred eccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-------------------------
Q 040814 473 EFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------------- 527 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------------- 527 (664)
|.++-|.|..||.. +...|+......++.||+.+|+|||+...+|+|+...|.
T Consensus 470 EL~~~GELr~yLq~--nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yY 547 (974)
T KOG4257|consen 470 ELAPLGELREYLQQ--NKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYY 547 (974)
T ss_pred ecccchhHHHHHHh--ccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccccchh
Confidence 99999999999954 456799999999999999999999999999999887661
Q ss_pred --ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCC
Q 040814 528 --NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCP 604 (664)
Q Consensus 528 --~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 604 (664)
....-...|||||.+.-..+|.+||||.|||.+|||++ |.+||..-...+ ..-.++..-+.++|
T Consensus 548 kaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD-------------VI~~iEnGeRlP~P 614 (974)
T KOG4257|consen 548 KASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD-------------VIGHIENGERLPCP 614 (974)
T ss_pred hccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccc-------------eEEEecCCCCCCCC
Confidence 11123356999999999999999999999999999987 999997543322 22223334455788
Q ss_pred HHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhcccc
Q 040814 605 ENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQ 641 (664)
Q Consensus 605 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~ 641 (664)
+.++..+..++.+||..||.+||++.|+...|+.+..
T Consensus 615 ~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 615 PNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred CCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 8999999999999999999999999999988876543
No 175
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.94 E-value=3.1e-26 Score=235.27 Aligned_cols=204 Identities=23% Similarity=0.286 Sum_probs=150.1
Q ss_pred ceeccCCCcCEEEEEEcC---CcEEEEEeccc-----------------------ceEEEEeEeecCCeeEEEEeccCCC
Q 040814 425 NKLGEGGFGPVYKGKLLD---GQVIAVKRLSG-----------------------RTIRLMGCSLHGAERILVYEFMPNK 478 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~~---~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV~Ey~~~g 478 (664)
+.||+|+||.||+|...+ +..+|+|+++. +++++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 368999999999998643 46799998742 4689999999999999999999999
Q ss_pred chhHHhhcccc--cCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc----------------------------c
Q 040814 479 SLDFFIFDSVK--KKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT----------------------------N 528 (664)
Q Consensus 479 sL~~~l~~~~~--~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~----------------------------~ 528 (664)
+|.+++..... ...+++..+..++.|+++||.|||+.+.+|+|+++.|. .
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~ 160 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPD 160 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceeecCC
Confidence 99999964322 23567888899999999999999999999999888771 0
Q ss_pred cccccCCccchhhhccC-------CCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhC
Q 040814 529 RVVGTYGYMAPEYAMNG-------IVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALD 600 (664)
Q Consensus 529 ~~~Gt~~Y~APE~~~~~-------~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 600 (664)
...++..|+|||++.+. .++.++|||||||++|||++ |+.||......+.. .+.... ......++.+.
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~---~~~~~~-~~~~~~~~~~~ 236 (269)
T cd05087 161 QLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVL---TYTVRE-QQLKLPKPRLK 236 (269)
T ss_pred CcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHH---HHHhhc-ccCCCCCCccC
Confidence 12356679999998642 35889999999999999996 99998644322211 111111 00111111111
Q ss_pred CCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHh
Q 040814 601 GPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLR 637 (664)
Q Consensus 601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~ 637 (664)
......+.+++..|| .+|++|||++||++.|+
T Consensus 237 ----~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 237 ----LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred ----CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 112334566777799 58999999999999885
No 176
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.94 E-value=4.8e-27 Score=253.59 Aligned_cols=203 Identities=18% Similarity=0.189 Sum_probs=155.8
Q ss_pred cCccccceeccCCCcCEEEEEEcC-CcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVY 472 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~ 472 (664)
++|++.+.||+|+||.||+++... ++.||||++.+ +++++++.+.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 368899999999999999999754 89999998842 2688999999999999999
Q ss_pred eccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc------------------------
Q 040814 473 EFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN------------------------ 528 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~------------------------ 528 (664)
|||++|+|.+++. +...+++.....++.||+.||+|||+.+++|+|+++.|.-
T Consensus 81 E~~~~g~L~~~i~---~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~ 157 (376)
T cd05598 81 DYIPGGDMMSLLI---RLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157 (376)
T ss_pred eCCCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccc
Confidence 9999999999994 3457899999999999999999999999999999987710
Q ss_pred ---------------------------------------------cccccCCccchhhhccCCCCccchHHHHHHHHHHH
Q 040814 529 ---------------------------------------------RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEI 563 (664)
Q Consensus 529 ---------------------------------------------~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~El 563 (664)
..+||+.|||||++.+..++.++|||||||++|||
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyel 237 (376)
T cd05598 158 KYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 237 (376)
T ss_pred cccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeeh
Confidence 13589999999999999999999999999999999
Q ss_pred HhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCC---CHHHHHHH
Q 040814 564 VSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRP---TMADVVSC 635 (664)
Q Consensus 564 ltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP---t~~evl~~ 635 (664)
++|+.||......+.... ..... .....+........+.+++.+|+ .+|.+|+ ++.|+++.
T Consensus 238 l~G~~Pf~~~~~~~~~~~---i~~~~-------~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 238 LVGQPPFLADTPAETQLK---VINWE-------TTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred hhCCCCCCCCCHHHHHHH---HhccC-------ccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 999999965432211110 00000 00000111112233444555554 4999999 88888754
No 177
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.94 E-value=1.5e-26 Score=238.66 Aligned_cols=199 Identities=26% Similarity=0.349 Sum_probs=158.4
Q ss_pred CccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-----------------------ceEEEEeEeecCCeeEEEEecc
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-----------------------RTIRLMGCSLHGAERILVYEFM 475 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV~Ey~ 475 (664)
.|+..+.||+|+||.||+|... +++.||+|.+.. +++++++++..+...++||||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 3566788999999999999875 488999998752 2578889999899999999999
Q ss_pred CCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------cc
Q 040814 476 PNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NR 529 (664)
Q Consensus 476 ~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~ 529 (664)
++++|.+++. ...+++..+..++.||++||.|||+.+.+|.++++.|. ..
T Consensus 85 ~~~~L~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~ 160 (277)
T cd06642 85 GGGSALDLLK----PGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT 160 (277)
T ss_pred CCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcchhhhc
Confidence 9999999883 35789999999999999999999999999999888771 11
Q ss_pred ccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHH
Q 040814 530 VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELL 609 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 609 (664)
..|+..|+|||++.+..++.++|||||||++|||++|+.|+.......... . +........+.....
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~----~---------~~~~~~~~~~~~~~~ 227 (277)
T cd06642 161 FVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLF----L---------IPKNSPPTLEGQYSK 227 (277)
T ss_pred ccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHh----h---------hhcCCCCCCCcccCH
Confidence 246778999999998889999999999999999999999986432221110 0 011111112223445
Q ss_pred HHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 610 RCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 610 ~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
.+.+++.+||+.+|++||+|.+|++.
T Consensus 228 ~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 228 PFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred HHHHHHHHHccCCcccCcCHHHHHHh
Confidence 67788899999999999999999974
No 178
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.94 E-value=2.1e-26 Score=241.03 Aligned_cols=226 Identities=23% Similarity=0.337 Sum_probs=167.5
Q ss_pred cCccccceeccCCCcCEEEEEEc-CCc----EEEEEeccc-----------------------ceEEEEeEeecCCeeEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-DGQ----VIAVKRLSG-----------------------RTIRLMGCSLHGAERIL 470 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~----~vavK~~~~-----------------------~~v~l~g~~~~~~~~~l 470 (664)
++|+..+.||+|+||.||+|... +++ .||+|.+.. ++++++++|... ...+
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~ 85 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL 85 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence 46777899999999999999864 343 578887753 368999988654 5679
Q ss_pred EEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-----------------------
Q 040814 471 VYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT----------------------- 527 (664)
Q Consensus 471 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~----------------------- 527 (664)
++||+++|+|.+++.. ....+++..+..++.||+.||.|||+.+++|+|+++.|.
T Consensus 86 v~e~~~~g~l~~~~~~--~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~ 163 (303)
T cd05110 86 VTQLMPHGCLLDYVHE--HKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE 163 (303)
T ss_pred eehhcCCCCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccCcc
Confidence 9999999999999853 234689999999999999999999999999999998771
Q ss_pred -----ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCC
Q 040814 528 -----NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDG 601 (664)
Q Consensus 528 -----~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 601 (664)
....++..|+|||.+.+..++.++|||||||++|||++ |+.||........ . +++......
T Consensus 164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~---~----------~~~~~~~~~ 230 (303)
T cd05110 164 KEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREI---P----------DLLEKGERL 230 (303)
T ss_pred cccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH---H----------HHHHCCCCC
Confidence 01123557999999998999999999999999999998 8898854321111 1 111111111
Q ss_pred CCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhccccccc--------ccccCCCCCCCccccC
Q 040814 602 PCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQHFS--------SVLLLRSSKVPRINQG 660 (664)
Q Consensus 602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~--------~~~~~~~p~~p~~~~~ 660 (664)
..+......+.+++..||..+|++||+++++++.|+.+..... ....+|.|..+.++.+
T Consensus 231 ~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (303)
T cd05110 231 PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDPQRYLVIQGDDRMKLPSPNDSKFFQN 297 (303)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhchhhheeeccCCcCCCCCCchhhHHhc
Confidence 1122234567788899999999999999999999987643221 2344566665555543
No 179
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.94 E-value=7.9e-27 Score=246.80 Aligned_cols=194 Identities=18% Similarity=0.168 Sum_probs=153.2
Q ss_pred ceeccCCCcCEEEEEEcC-CcEEEEEeccc--------------------------ceEEEEeEeecCCeeEEEEeccCC
Q 040814 425 NKLGEGGFGPVYKGKLLD-GQVIAVKRLSG--------------------------RTIRLMGCSLHGAERILVYEFMPN 477 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~--------------------------~~v~l~g~~~~~~~~~lV~Ey~~~ 477 (664)
+.||+|+||.||+++... ++.||+|++.+ +++++++++..++..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 469999999999999854 78899998742 257888999999999999999999
Q ss_pred CchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------cccc
Q 040814 478 KSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NRVV 531 (664)
Q Consensus 478 gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~~~ 531 (664)
|+|..++. +...+.+.....++.||++||.|||+.+++|+|+++.|. ....
T Consensus 81 ~~L~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 157 (325)
T cd05602 81 GELFYHLQ---RERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFC 157 (325)
T ss_pred CcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCccccc
Confidence 99999984 345688889999999999999999999999999998761 1235
Q ss_pred ccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHH
Q 040814 532 GTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRC 611 (664)
Q Consensus 532 Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l 611 (664)
||+.|||||++.+..++.++|||||||++|||++|+.||......+. .. .+.... ...+......+
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~---~~---------~i~~~~--~~~~~~~~~~~ 223 (325)
T cd05602 158 GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM---YD---------NILNKP--LQLKPNITNSA 223 (325)
T ss_pred CCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHH---HH---------HHHhCC--cCCCCCCCHHH
Confidence 88999999999999999999999999999999999999864332111 11 011110 11222334556
Q ss_pred HHHHHhcccccCCCCCCHHHHHHH
Q 040814 612 IHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 612 ~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
.+++.+|++.+|.+||++.+.+..
T Consensus 224 ~~li~~~l~~~p~~R~~~~~~~~~ 247 (325)
T cd05602 224 RHLLEGLLQKDRTKRLGAKDDFME 247 (325)
T ss_pred HHHHHHHcccCHHHCCCCCCCHHH
Confidence 778888999999999998754433
No 180
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.94 E-value=1.1e-26 Score=250.04 Aligned_cols=211 Identities=18% Similarity=0.205 Sum_probs=159.7
Q ss_pred HHHHHHHhcCccccceeccCCCcCEEEEEEcC-CcEEEEEeccc-------------------------ceEEEEeEeec
Q 040814 411 FQTIAAATNNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG-------------------------RTIRLMGCSLH 464 (664)
Q Consensus 411 ~~~i~~~t~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~-------------------------~~v~l~g~~~~ 464 (664)
+.++....++|++.+.||+|+||.||+++.+. ++.+|+|++.+ +++++++.+..
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 33455566899999999999999999999864 88999998742 36889999999
Q ss_pred CCeeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-----------------
Q 040814 465 GAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT----------------- 527 (664)
Q Consensus 465 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~----------------- 527 (664)
+...++|||||++|+|..++. ...++...+..++.||+.||.|||+.+++|+|+++.|.
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~ 190 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMS----NYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCM 190 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHH----hcCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCcee
Confidence 999999999999999999984 34588999999999999999999999999999998771
Q ss_pred ----------ccccccCCccchhhhccC----CCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhH
Q 040814 528 ----------NRVVGTYGYMAPEYAMNG----IVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASE 593 (664)
Q Consensus 528 ----------~~~~Gt~~Y~APE~~~~~----~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 593 (664)
...+||+.|||||++.+. .++.++|||||||++|||++|+.||...+..... ........
T Consensus 191 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~---~~i~~~~~--- 264 (371)
T cd05622 191 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTY---SKIMNHKN--- 264 (371)
T ss_pred EcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHH---HHHHcCCC---
Confidence 124589999999999753 3889999999999999999999999643321111 00110000
Q ss_pred hhhhhhCCCCCHHHHHHHHHHHHhcccccCCC--CCCHHHHHHH
Q 040814 594 LMEAALDGPCPENELLRCIHAGLLCVHDQAVN--RPTMADVVSC 635 (664)
Q Consensus 594 ~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPt~~evl~~ 635 (664)
.+..+........+.+++.+|++.++.+ ||+++|+++.
T Consensus 265 ----~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 265 ----SLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred ----cccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 0111111223445667777899744433 7889988875
No 181
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.94 E-value=4e-27 Score=246.69 Aligned_cols=215 Identities=21% Similarity=0.311 Sum_probs=167.1
Q ss_pred hcCccccceeccCCCcCEEEEEEcCCcEEEEEeccc-----------------------ceEEEEeEeecCCeeEEEEec
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLLDGQVIAVKRLSG-----------------------RTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV~Ey 474 (664)
.+...+.++||+|.||.|.++....+..||||++++ ++|+++|.|..++..++|+||
T Consensus 537 Rs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EY 616 (807)
T KOG1094|consen 537 RSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEY 616 (807)
T ss_pred hhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHH
Confidence 345566899999999999999997789999999963 489999999999999999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc---------------------------
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------- 527 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------- 527 (664)
|++|+|.+|+..+.. ..+.-..-.+|+.|||.||+||.+.+.+|+|+.+.|.
T Consensus 617 mEnGDLnqFl~ahea-pt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~v 695 (807)
T KOG1094|consen 617 MENGDLNQFLSAHEL-PTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRV 695 (807)
T ss_pred HhcCcHHHHHHhccC-cccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCceee
Confidence 999999999965422 2245566778999999999999999999999888771
Q ss_pred -ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHh--CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCC
Q 040814 528 -NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS--GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCP 604 (664)
Q Consensus 528 -~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt--G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 604 (664)
.+.+-..+|||||.+..+++|.+||||+|||+|||+++ ...||.....++...-...+...+... .-...|
T Consensus 696 qgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~------~~l~~P 769 (807)
T KOG1094|consen 696 QGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQ------VVLSRP 769 (807)
T ss_pred ecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcc------eeccCC
Confidence 11233468999999999999999999999999999876 677775443332221111111111100 011335
Q ss_pred HHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhcc
Q 040814 605 ENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQN 639 (664)
Q Consensus 605 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 639 (664)
.-++..+.+++++||..|.++||+++++...|.+.
T Consensus 770 ~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 770 PACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred CcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 56677788999999999999999999999988764
No 182
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.94 E-value=6e-27 Score=247.75 Aligned_cols=192 Identities=21% Similarity=0.232 Sum_probs=153.4
Q ss_pred ceeccCCCcCEEEEEEc-CCcEEEEEeccc--------------------------ceEEEEeEeecCCeeEEEEeccCC
Q 040814 425 NKLGEGGFGPVYKGKLL-DGQVIAVKRLSG--------------------------RTIRLMGCSLHGAERILVYEFMPN 477 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~--------------------------~~v~l~g~~~~~~~~~lV~Ey~~~ 477 (664)
+.||+|+||.||+++.. +|+.||+|++.+ +++++++.+..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46999999999999974 589999998742 258889999999999999999999
Q ss_pred CchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc--------------------------ccccc
Q 040814 478 KSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN--------------------------TNRVV 531 (664)
Q Consensus 478 gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n--------------------------~~~~~ 531 (664)
|+|..++. +...+++..+..++.||++||.|||+.+++|+|+++.| .....
T Consensus 81 ~~L~~~l~---~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~ 157 (325)
T cd05604 81 GELFFHLQ---RERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFC 157 (325)
T ss_pred CCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCccccc
Confidence 99998884 34679999999999999999999999999999998876 11235
Q ss_pred ccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCC--CCCHHHHH
Q 040814 532 GTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDG--PCPENELL 609 (664)
Q Consensus 532 Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~ 609 (664)
||+.|||||++.+..++.++|||||||++|||++|+.||...+..+ +.+..+.. ..+.....
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~----------------~~~~~~~~~~~~~~~~~~ 221 (325)
T cd05604 158 GTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAE----------------MYDNILHKPLVLRPGASL 221 (325)
T ss_pred CChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHH----------------HHHHHHcCCccCCCCCCH
Confidence 8899999999999999999999999999999999999986432111 11111111 11222345
Q ss_pred HHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 610 RCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 610 ~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
.+.+++.+|++.+|.+||++.+.++.
T Consensus 222 ~~~~ll~~ll~~~p~~R~~~~~~~~~ 247 (325)
T cd05604 222 TAWSILEELLEKDRQRRLGAKEDFLE 247 (325)
T ss_pred HHHHHHHHHhccCHHhcCCCCCCHHH
Confidence 56778888999999999988644433
No 183
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.94 E-value=1e-26 Score=245.41 Aligned_cols=187 Identities=20% Similarity=0.241 Sum_probs=151.6
Q ss_pred ceeccCCCcCEEEEEEc-CCcEEEEEeccc--------------------------ceEEEEeEeecCCeeEEEEeccCC
Q 040814 425 NKLGEGGFGPVYKGKLL-DGQVIAVKRLSG--------------------------RTIRLMGCSLHGAERILVYEFMPN 477 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~--------------------------~~v~l~g~~~~~~~~~lV~Ey~~~ 477 (664)
+.||+|+||.||+|+.. +++.||+|++.+ +++++++.+.+.+..++|||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999985 488999998742 258888999999999999999999
Q ss_pred CchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------cccc
Q 040814 478 KSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NRVV 531 (664)
Q Consensus 478 gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~~~ 531 (664)
|+|..++. +...+++..+..++.||+.||.|||+.+++|+|+++.|. ....
T Consensus 81 ~~L~~~l~---~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (321)
T cd05603 81 GELFFHLQ---RERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFC 157 (321)
T ss_pred CCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCcccccc
Confidence 99988884 346788999999999999999999999999999998771 1235
Q ss_pred ccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhC--CCCCHHHHH
Q 040814 532 GTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALD--GPCPENELL 609 (664)
Q Consensus 532 Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~ 609 (664)
||+.|+|||.+.+..++.++|||||||++|||++|+.||...+.. ++.+.... ...+.....
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~----------------~~~~~i~~~~~~~~~~~~~ 221 (321)
T cd05603 158 GTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVS----------------QMYDNILHKPLQLPGGKTV 221 (321)
T ss_pred CCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHH----------------HHHHHHhcCCCCCCCCCCH
Confidence 788999999999989999999999999999999999998643211 11111111 122334455
Q ss_pred HHHHHHHhcccccCCCCCCHH
Q 040814 610 RCIHAGLLCVHDQAVNRPTMA 630 (664)
Q Consensus 610 ~l~~l~~~Cl~~dP~~RPt~~ 630 (664)
.+.+++.+||+.||.+||++.
T Consensus 222 ~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 222 AACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred HHHHHHHHHccCCHhhcCCCC
Confidence 678888999999999999764
No 184
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.94 E-value=3.8e-26 Score=234.70 Aligned_cols=205 Identities=24% Similarity=0.362 Sum_probs=155.4
Q ss_pred cccceeccCCCcCEEEEEEcC-Cc--EEEEEeccc------------------------ceEEEEeEeecC------Cee
Q 040814 422 STTNKLGEGGFGPVYKGKLLD-GQ--VIAVKRLSG------------------------RTIRLMGCSLHG------AER 468 (664)
Q Consensus 422 ~~~~~lg~G~fg~Vy~~~~~~-~~--~vavK~~~~------------------------~~v~l~g~~~~~------~~~ 468 (664)
.+.+.||+|+||.||+|...+ ++ .+|+|.+.. +++++++++.+. ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 456889999999999999755 33 689997632 368899887542 246
Q ss_pred EEEEeccCCCchhHHhhccc---ccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc------------------
Q 040814 469 ILVYEFMPNKSLDFFIFDSV---KKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------ 527 (664)
Q Consensus 469 ~lV~Ey~~~gsL~~~l~~~~---~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------ 527 (664)
++|||||++|+|..++.... ....+++.....++.||+.||.|||+.+++|+|+++.|.
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 161 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKK 161 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcccc
Confidence 89999999999999884321 234589999999999999999999999999999998871
Q ss_pred ----------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhh
Q 040814 528 ----------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELME 596 (664)
Q Consensus 528 ----------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d 596 (664)
....+++.|+|||.+.+..++.++|||||||++|||++ |+.||...... ...... ..+..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~~~~~~-~~~~~----- 232 (272)
T cd05075 162 IYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS---EIYDYL-RQGNR----- 232 (272)
T ss_pred cCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHHHH-HcCCC-----
Confidence 01124457999999999899999999999999999999 78887543211 111111 11110
Q ss_pred hhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhcc
Q 040814 597 AALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQN 639 (664)
Q Consensus 597 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 639 (664)
...+......+.+++.+||+.+|++|||+.+|++.|+++
T Consensus 233 ----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 233 ----LKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred ----CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 011223445578889999999999999999999999864
No 185
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.94 E-value=4.1e-26 Score=233.63 Aligned_cols=201 Identities=22% Similarity=0.336 Sum_probs=159.5
Q ss_pred CccccceeccCCCcCEEEEEEcCCcEEEEEecc----------------------------cceEEEEeEeecCCeeEEE
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLLDGQVIAVKRLS----------------------------GRTIRLMGCSLHGAERILV 471 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~----------------------------~~~v~l~g~~~~~~~~~lV 471 (664)
+|...+.||+|+||.||+|...+++.+|+|.+. ++++++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 467789999999999999998789999999763 2368999999999999999
Q ss_pred EeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc------------------------
Q 040814 472 YEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------------ 527 (664)
Q Consensus 472 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------------ 527 (664)
+||+++++|.+++. +...+++..+..++.|++.||.|||+.+++|.++++.|.
T Consensus 81 ~e~~~~~~L~~~l~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 157 (265)
T cd06631 81 MEFVPGGSISSILN---RFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGL 157 (265)
T ss_pred EecCCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccc
Confidence 99999999999994 335789999999999999999999999999998887761
Q ss_pred --------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhh
Q 040814 528 --------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAAL 599 (664)
Q Consensus 528 --------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 599 (664)
....|+..|+|||++.+..++.++|||||||++|||++|+.||...+....... .... ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~----~~~~-------~~~ 226 (265)
T cd06631 158 HGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFY----IGAH-------RGL 226 (265)
T ss_pred cccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHH----hhhc-------cCC
Confidence 112467789999999988899999999999999999999999864322111000 0000 000
Q ss_pred CCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 600 DGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
....+......+.+++.+||+.+|++||++.|+++
T Consensus 227 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 227 MPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred CCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 11122334456778888999999999999999875
No 186
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=4e-27 Score=247.32 Aligned_cols=207 Identities=23% Similarity=0.326 Sum_probs=171.6
Q ss_pred CccccceeccCCCcCEEEEEEcC-CcEEEEEecc---------------------cceEEEEeEeecCCeeEEEEeccCC
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLS---------------------GRTIRLMGCSLHGAERILVYEFMPN 477 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~---------------------~~~v~l~g~~~~~~~~~lV~Ey~~~ 477 (664)
+.....+||-|.||.||.|.++. .-.||||.++ +++|+|+|.|.++..+|||.|||.+
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~y 347 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCY 347 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccC
Confidence 44557899999999999999966 6789999885 3579999999999999999999999
Q ss_pred CchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccccc----c-----------------------
Q 040814 478 KSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTNR----V----------------------- 530 (664)
Q Consensus 478 gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~~----~----------------------- 530 (664)
|+|.+||.+. ++..++--..+.++.||+.||+||.++..+|+|+...|+-. +
T Consensus 348 GNLLdYLRec-nr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGA 426 (1157)
T KOG4278|consen 348 GNLLDYLREC-NRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGA 426 (1157)
T ss_pred ccHHHHHHHh-chhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCc
Confidence 9999999653 45677788889999999999999999999999887766210 0
Q ss_pred cccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHH
Q 040814 531 VGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELL 609 (664)
Q Consensus 531 ~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 609 (664)
.-...|.|||-+....++.|+|||+|||+||||.| |-.|+.+.+-. ...++++...+-..|+.++.
T Consensus 427 KFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlS-------------qVY~LLEkgyRM~~PeGCPp 493 (1157)
T KOG4278|consen 427 KFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-------------QVYGLLEKGYRMDGPEGCPP 493 (1157)
T ss_pred cCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHH-------------HHHHHHhccccccCCCCCCH
Confidence 11246999999999999999999999999999999 77776543211 23345555556666778888
Q ss_pred HHHHHHHhcccccCCCCCCHHHHHHHHhccc
Q 040814 610 RCIHAGLLCVHDQAVNRPTMADVVSCLRQNN 640 (664)
Q Consensus 610 ~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 640 (664)
.+.+++..||+..|.+||+++|+.+.+|.+.
T Consensus 494 kVYeLMraCW~WsPsDRPsFaeiHqafEtmf 524 (1157)
T KOG4278|consen 494 KVYELMRACWNWSPSDRPSFAEIHQAFETMF 524 (1157)
T ss_pred HHHHHHHHHhcCCcccCccHHHHHHHHHHHh
Confidence 9999999999999999999999999887643
No 187
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=1.2e-26 Score=240.59 Aligned_cols=214 Identities=21% Similarity=0.265 Sum_probs=163.1
Q ss_pred hcCccccceeccCCCcCEEEEEE-cCCcEEEEEecc------------------------cceEEEEeEeecC--CeeEE
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKL-LDGQVIAVKRLS------------------------GRTIRLMGCSLHG--AERIL 470 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~------------------------~~~v~l~g~~~~~--~~~~l 470 (664)
.+.|+.+++||+|.||.||+|+. .+|+.||+|++. +++++|.+...+. ..+||
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 45677789999999999999996 569999999884 3578999988776 67999
Q ss_pred EEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc------------------------
Q 040814 471 VYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN------------------------ 526 (664)
Q Consensus 471 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n------------------------ 526 (664)
|+|||++ +|.-++.. ..-.|++.++..++.|++.||+|+|..+++|+|++..|
T Consensus 196 VFeYMdh-DL~GLl~~--p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~ 272 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSS--PGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSG 272 (560)
T ss_pred EEecccc-hhhhhhcC--CCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCC
Confidence 9999987 78777732 34589999999999999999999999999999999887
Q ss_pred ---cccccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCC---hh--Hhhhh
Q 040814 527 ---TNRVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGK---AS--ELMEA 597 (664)
Q Consensus 527 ---~~~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~---~~--~~~d~ 597 (664)
.+..+-|..|.|||.+.+ ..|+.++|+||.||||.||++|++.+.+..+.+++..+..+..... +. .+...
T Consensus 273 ~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~ 352 (560)
T KOG0600|consen 273 SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHA 352 (560)
T ss_pred CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcc
Confidence 233456889999999987 5699999999999999999999999988877777666644322111 00 00000
Q ss_pred -hhCC--CCCH-------HHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 598 -ALDG--PCPE-------NELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 598 -~~~~--~~~~-------~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
.+.. ++.. ......++++...|..||.+|.|+.++++
T Consensus 353 ~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 353 TIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred cccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 0000 1100 11233555666677789999999998875
No 188
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.94 E-value=2.4e-26 Score=238.96 Aligned_cols=215 Identities=22% Similarity=0.293 Sum_probs=163.5
Q ss_pred ccHHHHHHHhcCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc----------------------ceEEEEeEeecC
Q 040814 409 FNFQTIAAATNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG----------------------RTIRLMGCSLHG 465 (664)
Q Consensus 409 ~~~~~i~~~t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~----------------------~~v~l~g~~~~~ 465 (664)
+.++++..++++|++.+.||+|+||.||++... +++.+|+|++.. +++++++++...
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~ 91 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKA 91 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence 445566677899999999999999999999984 488999998742 368888888653
Q ss_pred -----CeeEEEEeccCCCchhHHhhccc-ccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc------------
Q 040814 466 -----AERILVYEFMPNKSLDFFIFDSV-KKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------ 527 (664)
Q Consensus 466 -----~~~~lV~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------ 527 (664)
...++||||+++++|.+++.... ....+++..+..++.|++.||.|||+.+++|.|+++.|.
T Consensus 92 ~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~d 171 (291)
T cd06639 92 DKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVD 171 (291)
T ss_pred cccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEee
Confidence 35899999999999999885422 245789999999999999999999999999998888761
Q ss_pred --------------ccccccCCccchhhhccC-----CCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhc
Q 040814 528 --------------NRVVGTYGYMAPEYAMNG-----IVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKE 588 (664)
Q Consensus 528 --------------~~~~Gt~~Y~APE~~~~~-----~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~ 588 (664)
....|+..|+|||.+... .++.++|||||||++|||++|+.||......... . . ...
T Consensus 172 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~--~-~-~~~ 247 (291)
T cd06639 172 FGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTL--F-K-IPR 247 (291)
T ss_pred cccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHH--H-H-Hhc
Confidence 123467789999998643 3689999999999999999999998643221110 0 0 000
Q ss_pred CChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 589 GKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 589 ~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
.....+ ..+......+.+++.+||+.+|++||++.|+++
T Consensus 248 ~~~~~~-------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 248 NPPPTL-------LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred CCCCCC-------CcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 100000 112223346788899999999999999999986
No 189
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.94 E-value=1.6e-26 Score=249.14 Aligned_cols=212 Identities=21% Similarity=0.255 Sum_probs=157.5
Q ss_pred CccccceeccCCCcCEEEEEEc-CCcEEEEEeccc------------------------ceEEEEeEeecCC-----eeE
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG------------------------RTIRLMGCSLHGA-----ERI 469 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~------------------------~~v~l~g~~~~~~-----~~~ 469 (664)
+|+..+.||+|+||.||++... +++.||||++.. +++++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4778899999999999999974 589999998742 3577888887766 789
Q ss_pred EEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc----------------------
Q 040814 470 LVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT---------------------- 527 (664)
Q Consensus 470 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~---------------------- 527 (664)
+|+||+. ++|..++. ....+++..+..++.||+.||.|||+.+++|+|+++.|.
T Consensus 81 lv~e~~~-~~l~~~~~---~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~ 156 (372)
T cd07853 81 VVTELMQ-SDLHKIIV---SPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPD 156 (372)
T ss_pred EEeeccc-cCHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccC
Confidence 9999997 57777773 346799999999999999999999999999999998871
Q ss_pred -----ccccccCCccchhhhccC-CCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhh------
Q 040814 528 -----NRVVGTYGYMAPEYAMNG-IVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELM------ 595 (664)
Q Consensus 528 -----~~~~Gt~~Y~APE~~~~~-~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------ 595 (664)
....+|..|+|||++.+. .++.++|||||||++|||++|+.||...+.......+..........++.
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 236 (372)
T cd07853 157 ESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGA 236 (372)
T ss_pred ccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHH
Confidence 112467889999999874 58999999999999999999999997654433222221111111111000
Q ss_pred -hhhhCC-----------CCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 596 -EAALDG-----------PCPENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 596 -d~~~~~-----------~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
...... .........+.+++.+||+.||++|||+.|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 237 RAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 000000 0111224567788999999999999999999864
No 190
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.94 E-value=3.4e-26 Score=237.31 Aligned_cols=203 Identities=23% Similarity=0.290 Sum_probs=156.9
Q ss_pred ccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEEec
Q 040814 421 FSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 421 ~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~Ey 474 (664)
|+..+.||+|+||.||+|... +++.+|+|.+.+ +++++.+++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 666789999999999999974 589999998742 257788888889999999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-------------------------cc
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-------------------------NR 529 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-------------------------~~ 529 (664)
+++++|..++... ....+++..+..++.|++.||.|||+.+++|+|+++.|. ..
T Consensus 82 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05632 82 MNGGDLKFHIYNM-GNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRG 160 (285)
T ss_pred ccCccHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccC
Confidence 9999999888542 234699999999999999999999999999999888660 12
Q ss_pred ccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHH
Q 040814 530 VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELL 609 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 609 (664)
..|+..|+|||++.+..++.++|||||||++|||++|+.||...........+... +... ....+.....
T Consensus 161 ~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~--------~~~~--~~~~~~~~~~ 230 (285)
T cd05632 161 RVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRR--------VLET--EEVYSAKFSE 230 (285)
T ss_pred CCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh--------hhcc--ccccCccCCH
Confidence 35788999999999889999999999999999999999998644322111111000 0000 0112222334
Q ss_pred HHHHHHHhcccccCCCCCC-----HHHHHH
Q 040814 610 RCIHAGLLCVHDQAVNRPT-----MADVVS 634 (664)
Q Consensus 610 ~l~~l~~~Cl~~dP~~RPt-----~~evl~ 634 (664)
.+.+++..||+.||++||+ +.++++
T Consensus 231 ~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 231 EAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred HHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 5677888899999999999 556654
No 191
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.94 E-value=4.8e-27 Score=247.65 Aligned_cols=190 Identities=22% Similarity=0.230 Sum_probs=151.8
Q ss_pred ceeccCCCcCEEEEEE----cCCcEEEEEeccc------------------------ceEEEEeEeecCCeeEEEEeccC
Q 040814 425 NKLGEGGFGPVYKGKL----LDGQVIAVKRLSG------------------------RTIRLMGCSLHGAERILVYEFMP 476 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~----~~~~~vavK~~~~------------------------~~v~l~g~~~~~~~~~lV~Ey~~ 476 (664)
+.||+|+||.||+++. .+|+.||+|++.+ +++++++++..++..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 6799999999999875 3488999998752 36889999999999999999999
Q ss_pred CCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc--------------------------cccc
Q 040814 477 NKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN--------------------------TNRV 530 (664)
Q Consensus 477 ~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n--------------------------~~~~ 530 (664)
+|+|.+++. +...+++..+..++.||++||.|||+.+++|+|+++.| ....
T Consensus 82 ~~~L~~~l~---~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 158 (318)
T cd05582 82 GGDLFTRLS---KEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 158 (318)
T ss_pred CCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecc
Confidence 999999984 34579999999999999999999999999999988876 1123
Q ss_pred cccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHH
Q 040814 531 VGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLR 610 (664)
Q Consensus 531 ~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 610 (664)
.||+.|+|||.+.+..++.++|||||||++|||++|+.||......+. ... +... ....+......
T Consensus 159 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~---~~~---------i~~~--~~~~p~~~~~~ 224 (318)
T cd05582 159 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKET---MTM---------ILKA--KLGMPQFLSPE 224 (318)
T ss_pred cCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHH---HHH---------HHcC--CCCCCCCCCHH
Confidence 578899999999988899999999999999999999999864322111 100 1100 11223333455
Q ss_pred HHHHHHhcccccCCCCCCHHH
Q 040814 611 CIHAGLLCVHDQAVNRPTMAD 631 (664)
Q Consensus 611 l~~l~~~Cl~~dP~~RPt~~e 631 (664)
+.+++.+||+.||++||++.+
T Consensus 225 ~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 225 AQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred HHHHHHHHhhcCHhHcCCCCC
Confidence 677888899999999999555
No 192
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.94 E-value=3.8e-26 Score=235.22 Aligned_cols=207 Identities=25% Similarity=0.375 Sum_probs=161.0
Q ss_pred cCccccceeccCCCcCEEEEEEc------CCcEEEEEeccc-----------------------ceEEEEeEeecCCeeE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL------DGQVIAVKRLSG-----------------------RTIRLMGCSLHGAERI 469 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~------~~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~ 469 (664)
++|++...||+|+||.||+|+.+ +.+.|++|.+.. +++++++++.+....+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 56788899999999999999964 246799997742 3688999999988999
Q ss_pred EEEeccCCCchhHHhhccccc------CCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc----------------
Q 040814 470 LVYEFMPNKSLDFFIFDSVKK------KQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT---------------- 527 (664)
Q Consensus 470 lV~Ey~~~gsL~~~l~~~~~~------~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~---------------- 527 (664)
+||||+++|+|.+++...... ..+++..+..++.|++.||.|||+.+++|.|+++.|.
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~ 164 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLS 164 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccccc
Confidence 999999999999999643211 2689999999999999999999999999999998871
Q ss_pred -----------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhh
Q 040814 528 -----------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELM 595 (664)
Q Consensus 528 -----------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (664)
....++..|+|||.+.+..++.++||||||+++|||++ |..||........ .. ....+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~---~~-~~~~~------ 234 (275)
T cd05046 165 KDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEV---LN-RLQAG------ 234 (275)
T ss_pred cccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHH---HH-HHHcC------
Confidence 11234556999999988889999999999999999999 7778753322111 10 00100
Q ss_pred hhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHh
Q 040814 596 EAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLR 637 (664)
Q Consensus 596 d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~ 637 (664)
......+......+.+++.+||+.+|++|||+.|++++|.
T Consensus 235 --~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 235 --KLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred --CcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 1111112233456888999999999999999999999885
No 193
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.94 E-value=2.7e-26 Score=243.64 Aligned_cols=209 Identities=23% Similarity=0.318 Sum_probs=162.4
Q ss_pred cCccccceeccCCCcCEEEEEEcC--------CcEEEEEeccc------------------------ceEEEEeEeecCC
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD--------GQVIAVKRLSG------------------------RTIRLMGCSLHGA 466 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~--------~~~vavK~~~~------------------------~~v~l~g~~~~~~ 466 (664)
.+|.+.+.||+|+||.||+++... ...||+|.+.. +++++++++.+++
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 468888999999999999997421 23689997642 3689999999999
Q ss_pred eeEEEEeccCCCchhHHhhccc-------------ccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc-----
Q 040814 467 ERILVYEFMPNKSLDFFIFDSV-------------KKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN----- 528 (664)
Q Consensus 467 ~~~lV~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~----- 528 (664)
..+++|||+++|+|.+++.... ....+++..+..++.||+.||.|||+.+++|+|+++.|.-
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~~ 171 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDN 171 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCC
Confidence 9999999999999999996421 1245899999999999999999999999999999988710
Q ss_pred -----------------------cccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhh
Q 040814 529 -----------------------RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGY 584 (664)
Q Consensus 529 -----------------------~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~ 584 (664)
...++..|||||++.+..++.++|||||||++|||++ |..||......+...
T Consensus 172 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~---- 247 (334)
T cd05100 172 VMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFK---- 247 (334)
T ss_pred cEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHH----
Confidence 0112346999999999999999999999999999998 888875432111110
Q ss_pred HHhcCChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhccc
Q 040814 585 LWKEGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNN 640 (664)
Q Consensus 585 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 640 (664)
.+........+......+.+++.+||+.+|++|||+.|+++.|+.+.
T Consensus 248 ---------~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~ 294 (334)
T cd05100 248 ---------LLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVL 294 (334)
T ss_pred ---------HHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence 01011111223334456778899999999999999999999999876
No 194
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.94 E-value=3.2e-26 Score=236.64 Aligned_cols=205 Identities=23% Similarity=0.290 Sum_probs=157.1
Q ss_pred cCccccceeccCCCcCEEEEEE-cCCcEEEEEeccc-----------------------ceEEEEeEeecCCeeEEEEec
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKL-LDGQVIAVKRLSG-----------------------RTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV~Ey 474 (664)
++|+..+.||+|+||.||+|.. .+++.||+|++.. +++++++++...+..++||||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 3577789999999999999987 4588999998742 368999999999999999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc------------------------cccc
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN------------------------TNRV 530 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n------------------------~~~~ 530 (664)
+++++|..+. .+++..+..++.|++.||.|||+.+++|.|+++.| ....
T Consensus 81 ~~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~ 153 (279)
T cd06619 81 MDGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTY 153 (279)
T ss_pred CCCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCC
Confidence 9999996543 47888999999999999999999999999988877 1224
Q ss_pred cccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHH
Q 040814 531 VGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLR 610 (664)
Q Consensus 531 ~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 610 (664)
.||..|+|||++.+..++.++|||||||++|||++|+.||............... ...+.+.............+
T Consensus 154 ~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 228 (279)
T cd06619 154 VGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQL-----LQCIVDEDPPVLPVGQFSEK 228 (279)
T ss_pred CCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHH-----HHHHhccCCCCCCCCcCCHH
Confidence 6788999999999889999999999999999999999998643222111000000 00000000000001123345
Q ss_pred HHHHHHhcccccCCCCCCHHHHHHH
Q 040814 611 CIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 611 l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
+.+++.+||+.+|++||+++|+++.
T Consensus 229 ~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 229 FVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred HHHHHHHHhhCChhhCCCHHHHhcC
Confidence 7788889999999999999999864
No 195
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.94 E-value=4.3e-27 Score=254.52 Aligned_cols=207 Identities=23% Similarity=0.312 Sum_probs=167.3
Q ss_pred ccceeccCCCcCEEEEEE-cCC----cEEEEEeccc-----------------------ceEEEEeEeecCCeeEEEEec
Q 040814 423 TTNKLGEGGFGPVYKGKL-LDG----QVIAVKRLSG-----------------------RTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 423 ~~~~lg~G~fg~Vy~~~~-~~~----~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV~Ey 474 (664)
..++||+|+||+||+|.+ ++| -+||+|++.. +++||+|+|.... ..||++|
T Consensus 700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~ 778 (1177)
T KOG1025|consen 700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQL 778 (1177)
T ss_pred hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHh
Confidence 358999999999999986 443 4789998843 3689999998876 8899999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc---------------------------
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------- 527 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------- 527 (664)
|+.|.|.+|++. .+..+.-+..+.+..|||+||.|||++..+|+|+...|.
T Consensus 779 mP~G~LlDyvr~--hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~ 856 (1177)
T KOG1025|consen 779 MPLGCLLDYVRE--HRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYS 856 (1177)
T ss_pred cccchHHHHHHH--hhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCccccccc
Confidence 999999999965 456888999999999999999999999999998776651
Q ss_pred -ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCH
Q 040814 528 -NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPE 605 (664)
Q Consensus 528 -~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 605 (664)
....-.+.|||-|.+....|+.++|||||||++||++| |..|++....++ +.++++...+-+.|+
T Consensus 857 ~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e-------------I~dlle~geRLsqPp 923 (1177)
T KOG1025|consen 857 APGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE-------------IPDLLEKGERLSQPP 923 (1177)
T ss_pred ccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH-------------hhHHHhccccCCCCC
Confidence 11112345889999999999999999999999999999 999986544332 233444444456677
Q ss_pred HHHHHHHHHHHhcccccCCCCCCHHHHHHHHhcccccccc
Q 040814 606 NELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQHFSS 645 (664)
Q Consensus 606 ~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~~~~~ 645 (664)
.+..++..++.+||..|+..||+++++...+.......+.
T Consensus 924 iCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardpqr 963 (1177)
T KOG1025|consen 924 ICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDPQR 963 (1177)
T ss_pred CccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCcce
Confidence 8888899999999999999999999999888766544333
No 196
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.94 E-value=1.4e-26 Score=248.55 Aligned_cols=214 Identities=19% Similarity=0.257 Sum_probs=168.1
Q ss_pred CccccceeccCCCcCEEEEEEc-CCcEEEEEecccc---------------------------eEEEEeEeecCCeeEEE
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSGR---------------------------TIRLMGCSLHGAERILV 471 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~---------------------------~v~l~g~~~~~~~~~lV 471 (664)
+|.+.+.||+|.||.|-+|... +++.||||+++++ +|++++++.+.++.|||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciV 266 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIV 266 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeee
Confidence 7889999999999999999974 4999999999753 69999999999999999
Q ss_pred EeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc------------------------
Q 040814 472 YEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------------ 527 (664)
Q Consensus 472 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------------ 527 (664)
+|.+. -+|.+||... +...|+...+..|+.||+.||.+||+.+++|.|+||+|.
T Consensus 267 fELL~-~NLYellK~n-~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~ 344 (586)
T KOG0667|consen 267 FELLS-TNLYELLKNN-KFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQR 344 (586)
T ss_pred ehhhh-hhHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCCc
Confidence 99985 4999999653 445799999999999999999999999999999999981
Q ss_pred -ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhH--------H----------hc
Q 040814 528 -NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYL--------W----------KE 588 (664)
Q Consensus 528 -~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~--------~----------~~ 588 (664)
...+.+..|.|||++.+.+|+.+.||||||||+.||++|.+-|.+.++.+++..+... + ..
T Consensus 345 vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~ 424 (586)
T KOG0667|consen 345 VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTS 424 (586)
T ss_pred ceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhc
Confidence 1234567899999999999999999999999999999998888777665554433221 0 00
Q ss_pred -CCh------hH--------hhhh-----hhCCCCC-----------HHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 589 -GKA------SE--------LMEA-----ALDGPCP-----------ENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 589 -~~~------~~--------~~d~-----~~~~~~~-----------~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
... .+ .... ......| ...-..+++++.+|++.||.+|+|..|.++.
T Consensus 425 ~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~H 502 (586)
T KOG0667|consen 425 LKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNH 502 (586)
T ss_pred cCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 000 00 0000 0110111 1233457899999999999999999999864
No 197
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.94 E-value=4.4e-26 Score=236.42 Aligned_cols=213 Identities=18% Similarity=0.224 Sum_probs=155.0
Q ss_pred CccccceeccCCCcCEEEEEEc-CCcEEEEEeccc---------------------------ceEEEEeEeec-----CC
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG---------------------------RTIRLMGCSLH-----GA 466 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~---------------------------~~v~l~g~~~~-----~~ 466 (664)
+|++.+.||+|+||.||+|+.+ +++.||+|.+.. +++++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4788899999999999999985 489999997642 36778887654 34
Q ss_pred eeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-------------------
Q 040814 467 ERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------- 527 (664)
Q Consensus 467 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------- 527 (664)
..++||||+++ +|..++... ....+++..+..++.||+.||.|||+.+++|+|+++.|.
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~ 158 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKV-PPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIY 158 (288)
T ss_pred eEEEEEccccc-CHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccc
Confidence 57899999985 888888532 234689999999999999999999999999999998761
Q ss_pred ------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHh---h---
Q 040814 528 ------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASEL---M--- 595 (664)
Q Consensus 528 ------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~--- 595 (664)
....||..|+|||++.+..++.++|||||||++|||++|++||...........+............ .
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T cd07863 159 SCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLP 238 (288)
T ss_pred cCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccccccc
Confidence 1235688899999999889999999999999999999999998654332221111100000000000 0
Q ss_pred hhhhCC-------CCCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 596 EAALDG-------PCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 596 d~~~~~-------~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
...... .........+.+++.+|++.||++|||+.|++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 239 RGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred ccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 000000 001122345678889999999999999999874
No 198
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.94 E-value=8.3e-26 Score=242.16 Aligned_cols=152 Identities=22% Similarity=0.289 Sum_probs=131.8
Q ss_pred HHhcCccccceeccCCCcCEEEEEEcC-CcEEEEEecc----------------cceEEEEeEeecCCeeEEEEeccCCC
Q 040814 416 AATNNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLS----------------GRTIRLMGCSLHGAERILVYEFMPNK 478 (664)
Q Consensus 416 ~~t~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~----------------~~~v~l~g~~~~~~~~~lV~Ey~~~g 478 (664)
....+|++.+.||+|+||.||+|.... ++.||+|+.. ++++++++++.++...++|+||+. +
T Consensus 63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 141 (357)
T PHA03209 63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS-S 141 (357)
T ss_pred hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC-C
Confidence 445689999999999999999999854 7899999753 358999999999999999999995 5
Q ss_pred chhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-------------------------cccccc
Q 040814 479 SLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-------------------------NRVVGT 533 (664)
Q Consensus 479 sL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-------------------------~~~~Gt 533 (664)
+|..++.. ....+++..+..|+.||+.||.|||+.+++|+|+++.|. ....||
T Consensus 142 ~l~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~gt 219 (357)
T PHA03209 142 DLYTYLTK--RSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLAGT 219 (357)
T ss_pred cHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccCccccccccc
Confidence 88888743 346799999999999999999999999999999998771 123588
Q ss_pred CCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCC
Q 040814 534 YGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNN 570 (664)
Q Consensus 534 ~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~ 570 (664)
+.|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 220 ~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 220 VETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred ccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 9999999999999999999999999999999976654
No 199
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.94 E-value=5.6e-26 Score=231.01 Aligned_cols=204 Identities=24% Similarity=0.336 Sum_probs=162.0
Q ss_pred hcCccccceeccCCCcCEEEEEEcC-CcEEEEEeccc--------------------ceEEEEeEeecCCeeEEEEeccC
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG--------------------RTIRLMGCSLHGAERILVYEFMP 476 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~--------------------~~v~l~g~~~~~~~~~lV~Ey~~ 476 (664)
.++|+..+.||+|+||.||+|...+ ++.+++|.+.. +++++++++..+...++++||++
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 81 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCG 81 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCC
Confidence 3678889999999999999999865 88999998752 46899999999999999999999
Q ss_pred CCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------ccc
Q 040814 477 NKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NRV 530 (664)
Q Consensus 477 ~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~~ 530 (664)
+++|.+++.. ....+++..+..++.|++.||.|||+.+++|+++++.|. ...
T Consensus 82 ~~~L~~~l~~--~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 159 (256)
T cd06612 82 AGSVSDIMKI--TNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTV 159 (256)
T ss_pred CCcHHHHHHh--CccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCccccccc
Confidence 9999999843 246789999999999999999999999999999887761 112
Q ss_pred cccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHH
Q 040814 531 VGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLR 610 (664)
Q Consensus 531 ~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 610 (664)
.|+..|+|||++.+..++.++|||||||++|||++|+.|+............ ... .......+......
T Consensus 160 ~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~----~~~-------~~~~~~~~~~~~~~ 228 (256)
T cd06612 160 IGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMI----PNK-------PPPTLSDPEKWSPE 228 (256)
T ss_pred cCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhh----ccC-------CCCCCCchhhcCHH
Confidence 3677899999999889999999999999999999999998643322111000 000 00000112223345
Q ss_pred HHHHHHhcccccCCCCCCHHHHHH
Q 040814 611 CIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 611 l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
+.+++.+||+.+|++|||+.||++
T Consensus 229 ~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 229 FNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred HHHHHHHHHhcChhhCcCHHHHhc
Confidence 778888999999999999999986
No 200
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.94 E-value=2.1e-26 Score=254.78 Aligned_cols=207 Identities=18% Similarity=0.212 Sum_probs=166.9
Q ss_pred HhcCccccceeccCCCcCEEEEEEcCC-cEEEEEec-----------------------ccceEEEEeEee-c------C
Q 040814 417 ATNNFSTTNKLGEGGFGPVYKGKLLDG-QVIAVKRL-----------------------SGRTIRLMGCSL-H------G 465 (664)
Q Consensus 417 ~t~~~~~~~~lg~G~fg~Vy~~~~~~~-~~vavK~~-----------------------~~~~v~l~g~~~-~------~ 465 (664)
...++++.+.|.+|||+.||.++...+ ..+|+|++ |+++|.+++... . .
T Consensus 35 g~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~ 114 (738)
T KOG1989|consen 35 GSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV 114 (738)
T ss_pred CCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence 445677889999999999999998665 99999987 345788888322 1 2
Q ss_pred CeeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcC--ccccccccccc----------------
Q 040814 466 AERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYS--RLRMNESKVNT---------------- 527 (664)
Q Consensus 466 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~--~~h~d~~~~n~---------------- 527 (664)
-+.+|.||||++|+|-+|+..+.. ..|++.++++|+.|+++|+++||... ++|+|+|-+|.
T Consensus 115 ~EvllLmEyC~gg~Lvd~mn~Rlq-~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSa 193 (738)
T KOG1989|consen 115 WEVLLLMEYCKGGSLVDFMNTRLQ-TRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSA 193 (738)
T ss_pred eEEEeehhhccCCcHHHHHHHHHh-ccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCccccc
Confidence 468899999999999999965543 34999999999999999999999887 99999998871
Q ss_pred -------------------ccccccCCccchhhh---ccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhH
Q 040814 528 -------------------NRVVGTYGYMAPEYA---MNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYL 585 (664)
Q Consensus 528 -------------------~~~~Gt~~Y~APE~~---~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~ 585 (664)
-....|+.|+|||.+ .+..+++|+|||++||+||-|+....||+...
T Consensus 194 tt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg----------- 262 (738)
T KOG1989|consen 194 TTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESG----------- 262 (738)
T ss_pred ccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCc-----------
Confidence 001368899999987 47889999999999999999999999986432
Q ss_pred HhcCChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhccc
Q 040814 586 WKEGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNN 640 (664)
Q Consensus 586 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 640 (664)
...+++....-+-.+....++..|+..||+.+|++||++-||+..+..+.
T Consensus 263 -----~laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~ 312 (738)
T KOG1989|consen 263 -----KLAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELA 312 (738)
T ss_pred -----ceeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHh
Confidence 12333433343444567788888889999999999999999998876654
No 201
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.94 E-value=4.3e-26 Score=261.62 Aligned_cols=211 Identities=15% Similarity=0.220 Sum_probs=163.5
Q ss_pred cCccccceeccCCCcCEEEEEEcC-CcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVY 472 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~ 472 (664)
++|++.++||+|+||.||+|.... ++.||+|++.. +++++++++.+++..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 578999999999999999999754 89999998742 3688999999999999999
Q ss_pred eccCCCchhHHhhcccc--------cCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-----------------
Q 040814 473 EFMPNKSLDFFIFDSVK--------KKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT----------------- 527 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~~--------~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~----------------- 527 (664)
||+++|+|.+++..... ...+++..++.|+.||++||+|||+.+++|+|++|.|.
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk 161 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAI 161 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcce
Confidence 99999999999853211 23467788899999999999999999999999999871
Q ss_pred ---------------------------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchh
Q 040814 528 ---------------------------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLN 580 (664)
Q Consensus 528 ---------------------------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~ 580 (664)
...+||+.|||||++.+..++.++|||||||++|||+||+.||.........
T Consensus 162 ~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~- 240 (932)
T PRK13184 162 FKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKIS- 240 (932)
T ss_pred ecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhh-
Confidence 0135899999999999999999999999999999999999998653221110
Q ss_pred hhhhHHhcCChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCC-CHHHHHHHHhccc
Q 040814 581 LVGYLWKEGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRP-TMADVVSCLRQNN 640 (664)
Q Consensus 581 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-t~~evl~~L~~~~ 640 (664)
.. ..+.++.... ........+.+++.+|++.||++|| +++++.+.|+...
T Consensus 241 -----~~----~~i~~P~~~~-p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~l 291 (932)
T PRK13184 241 -----YR----DVILSPIEVA-PYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHL 291 (932)
T ss_pred -----hh----hhccChhhcc-ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 00 0000000000 0112234567888899999999996 5777888777654
No 202
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.94 E-value=4.7e-26 Score=237.60 Aligned_cols=202 Identities=21% Similarity=0.302 Sum_probs=160.0
Q ss_pred cCccccceeccCCCcCEEEEEE-cCCcEEEEEeccc----------------------ceEEEEeEeecCCeeEEEEecc
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKL-LDGQVIAVKRLSG----------------------RTIRLMGCSLHGAERILVYEFM 475 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~----------------------~~v~l~g~~~~~~~~~lV~Ey~ 475 (664)
.+|+..+.||.|++|.||+|.. .+++.||+|.+.. +++++++++..++..++|+||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 4688899999999999999986 4589999997742 3689999999999999999999
Q ss_pred CCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------cc
Q 040814 476 PNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NR 529 (664)
Q Consensus 476 ~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~ 529 (664)
++++|..++. ...+++.++..++.|++.||.|||+.+.+|.|+++.|. ..
T Consensus 99 ~~~~L~~~~~----~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 174 (296)
T cd06655 99 AGGSLTDVVT----ETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRST 174 (296)
T ss_pred CCCcHHHHHH----hcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccccCCC
Confidence 9999999883 34689999999999999999999999999999888761 12
Q ss_pred ccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHH
Q 040814 530 VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELL 609 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 609 (664)
..|+..|+|||.+.+..++.++|||||||++|||++|+.||...+....... ... ... + ....+.....
T Consensus 175 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~---~~~-~~~-----~--~~~~~~~~~~ 243 (296)
T cd06655 175 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL---IAT-NGT-----P--ELQNPEKLSP 243 (296)
T ss_pred cCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHh-cCC-----c--ccCCcccCCH
Confidence 3567789999999988899999999999999999999999865432211100 000 000 0 0011222334
Q ss_pred HHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 610 RCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 610 ~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
.+.+++.+||+.||++|||+.+|++.
T Consensus 244 ~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 244 IFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred HHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 56778889999999999999999853
No 203
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.94 E-value=3.8e-26 Score=236.64 Aligned_cols=217 Identities=22% Similarity=0.305 Sum_probs=159.9
Q ss_pred CccccceeccCCCcCEEEEEE-----cCCcEEEEEeccc-----------------------ceEEEEeEeecC--CeeE
Q 040814 420 NFSTTNKLGEGGFGPVYKGKL-----LDGQVIAVKRLSG-----------------------RTIRLMGCSLHG--AERI 469 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~-----~~~~~vavK~~~~-----------------------~~v~l~g~~~~~--~~~~ 469 (664)
.|++.+.||+|+||.||++.. .+++.||+|.++. +++++.+++... ...+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 467789999999999999984 2478899998852 368888888765 5688
Q ss_pred EEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc----------------------
Q 040814 470 LVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT---------------------- 527 (664)
Q Consensus 470 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~---------------------- 527 (664)
+||||+++++|.+++... ...+++..+..++.||+.||.|||+.+.+|+|+++.|.
T Consensus 85 lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~ 162 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRN--KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD 162 (284)
T ss_pred EEEEccCCCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccC
Confidence 999999999999998432 34689999999999999999999999999999998871
Q ss_pred -------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChh---Hhhhh
Q 040814 528 -------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKAS---ELMEA 597 (664)
Q Consensus 528 -------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~d~ 597 (664)
....++..|+|||++.+..++.++|||||||++|||++++.|....... ..........+.... ..+..
T Consensus 163 ~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 241 (284)
T cd05079 163 KEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTL-FLKMIGPTHGQMTVTRLVRVLEE 241 (284)
T ss_pred ccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccch-hhhhcccccccccHHHHHHHHHc
Confidence 0123445699999999888999999999999999999988764321100 000000000000001 11111
Q ss_pred hhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhcc
Q 040814 598 ALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQN 639 (664)
Q Consensus 598 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 639 (664)
....+.+......+.+++.+||+.+|++|||+.++++.|+.+
T Consensus 242 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 242 GKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred CccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 111122334456788999999999999999999999999865
No 204
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.94 E-value=8.7e-28 Score=233.38 Aligned_cols=203 Identities=23% Similarity=0.330 Sum_probs=168.8
Q ss_pred CccccceeccCCCcCEEEEEEcC-CcEEEEEeccc--------------------ceEEEEeEeecCCeeEEEEeccCCC
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG--------------------RTIRLMGCSLHGAERILVYEFMPNK 478 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~--------------------~~v~l~g~~~~~~~~~lV~Ey~~~g 478 (664)
-|.+..+||+|+||.|||+.++. |+.+|||++.- ..|+++|.+.....+++|||||..|
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAG 113 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAG 113 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCC
Confidence 46778999999999999999865 99999998853 2589999999999999999999999
Q ss_pred chhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc--------------------------cccccc
Q 040814 479 SLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN--------------------------TNRVVG 532 (664)
Q Consensus 479 sL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n--------------------------~~~~~G 532 (664)
++.+.+. .++++|++.++..|+++.++||+|||....+|+|++..| .+.+.|
T Consensus 114 SiSDI~R--~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVIG 191 (502)
T KOG0574|consen 114 SISDIMR--ARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVIG 191 (502)
T ss_pred cHHHHHH--HhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCcccc
Confidence 9999985 356899999999999999999999999999999988766 356789
Q ss_pred cCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHH
Q 040814 533 TYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRCI 612 (664)
Q Consensus 533 t~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~ 612 (664)
|+.|||||++..-.|+.++||||+|++..||.-|++|+...+.....-++. -.+...-..|+....++.
T Consensus 192 TPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIP-----------T~PPPTF~KPE~WS~~F~ 260 (502)
T KOG0574|consen 192 TPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIP-----------TKPPPTFKKPEEWSSEFN 260 (502)
T ss_pred CcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEecc-----------CCCCCCCCChHhhhhHHH
Confidence 999999999999999999999999999999999999987655443321110 001111123556667788
Q ss_pred HHHHhcccccCCCCCCHHHHHHH
Q 040814 613 HAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 613 ~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
+++..||-+.|++|-|+.++++.
T Consensus 261 DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 261 DFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred HHHHHHhcCCHHHHHHHHHHhhh
Confidence 88889999999999999888753
No 205
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.94 E-value=6.1e-26 Score=230.94 Aligned_cols=200 Identities=33% Similarity=0.442 Sum_probs=159.8
Q ss_pred ceeccCCCcCEEEEEEcC----CcEEEEEeccc-----------------------ceEEEEeEeecCCeeEEEEeccCC
Q 040814 425 NKLGEGGFGPVYKGKLLD----GQVIAVKRLSG-----------------------RTIRLMGCSLHGAERILVYEFMPN 477 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~~----~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV~Ey~~~ 477 (664)
+.||+|+||.||+|.... +..||+|.++. +++++++++..+...++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 469999999999999754 78899998863 257889999998999999999999
Q ss_pred CchhHHhhcccc------cCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc------------------------
Q 040814 478 KSLDFFIFDSVK------KKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------------ 527 (664)
Q Consensus 478 gsL~~~l~~~~~------~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------------ 527 (664)
++|.+++..... ...+++..+..++.|++.||.|||+.+.+|+|+++.|.
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~ 160 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDY 160 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccccc
Confidence 999999965321 36799999999999999999999999999999988771
Q ss_pred ----ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCC
Q 040814 528 ----NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGP 602 (664)
Q Consensus 528 ----~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 602 (664)
....++..|+|||.+....++.++||||+||++|||++ |+.||......+ ..... . ......
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~~~---------~-~~~~~~ 227 (262)
T cd00192 161 YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE---VLEYL---------R-KGYRLP 227 (262)
T ss_pred cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHH---HHHHH---------H-cCCCCC
Confidence 11345778999999998899999999999999999999 688886542211 11110 0 011112
Q ss_pred CCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHh
Q 040814 603 CPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLR 637 (664)
Q Consensus 603 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~ 637 (664)
.+.....++.+++.+||+.+|++|||+.|+++.|+
T Consensus 228 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 228 KPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred CCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 23334567888899999999999999999999874
No 206
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.94 E-value=2.4e-26 Score=234.16 Aligned_cols=204 Identities=25% Similarity=0.380 Sum_probs=160.4
Q ss_pred ccccceeccCCCcCEEEEEEcC-CcEEEEEeccc------------------------ceEEEEeEeecCCeeEEEEecc
Q 040814 421 FSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG------------------------RTIRLMGCSLHGAERILVYEFM 475 (664)
Q Consensus 421 ~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~------------------------~~v~l~g~~~~~~~~~lV~Ey~ 475 (664)
|+..+.||+|+||.||+++... ++.+|+|++.. +++++++++.+....++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 5678999999999999999865 67999999854 2688999999999999999999
Q ss_pred CCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc--------------------------ccc
Q 040814 476 PNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN--------------------------TNR 529 (664)
Q Consensus 476 ~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n--------------------------~~~ 529 (664)
++++|.+++. +...+++..+..++.||++||.|||+.+++|+|+++.| ...
T Consensus 81 ~~~~L~~~l~---~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 157 (260)
T PF00069_consen 81 PGGSLQDYLQ---KNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNP 157 (260)
T ss_dssp TTEBHHHHHH---HHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSS
T ss_pred cccccccccc---ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999995 45789999999999999999999999999999999887 112
Q ss_pred ccccCCccchhhhc-cCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHH
Q 040814 530 VVGTYGYMAPEYAM-NGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENEL 608 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~-~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 608 (664)
..++..|+|||++. +..++.++||||+|+++|||++|+.|+............... ......... .......
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~----~~~~~~~~~---~~~~~~~ 230 (260)
T PF00069_consen 158 FVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKI----LKRPLPSSS---QQSREKS 230 (260)
T ss_dssp SSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHH----HHTHHHHHT---TSHTTSH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhc----ccccccccc---cccchhH
Confidence 34778899999998 888999999999999999999999998644111111111000 000000000 0001112
Q ss_pred HHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 609 LRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 609 ~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
..+.+++.+||+.||++||++.++++
T Consensus 231 ~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 231 EELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 67888888999999999999999985
No 207
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.94 E-value=8.7e-26 Score=233.53 Aligned_cols=196 Identities=19% Similarity=0.234 Sum_probs=153.0
Q ss_pred eeccCCCcCEEEEEEc-CCcEEEEEeccc----------------------------ceEEEEeEeecCCeeEEEEeccC
Q 040814 426 KLGEGGFGPVYKGKLL-DGQVIAVKRLSG----------------------------RTIRLMGCSLHGAERILVYEFMP 476 (664)
Q Consensus 426 ~lg~G~fg~Vy~~~~~-~~~~vavK~~~~----------------------------~~v~l~g~~~~~~~~~lV~Ey~~ 476 (664)
.||+|+||.||++... +++.+|+|.+.+ +++++.+.+..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999975 489999997742 14667778888889999999999
Q ss_pred CCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc------------------------ccccc
Q 040814 477 NKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------------NRVVG 532 (664)
Q Consensus 477 ~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------------~~~~G 532 (664)
+|+|..++. ..+.+++..+..|+.|++.||.|||+.+++|+|+++.|. ....|
T Consensus 81 ~~~L~~~i~---~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 157 (279)
T cd05633 81 GGDLHYHLS---QHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG 157 (279)
T ss_pred CCCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCC
Confidence 999999884 345799999999999999999999999999999998761 11257
Q ss_pred cCCccchhhhc-cCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHH
Q 040814 533 TYGYMAPEYAM-NGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRC 611 (664)
Q Consensus 533 t~~Y~APE~~~-~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l 611 (664)
|..|+|||.+. +..++.++|||||||++|||++|+.||.......... +.. .........+.....++
T Consensus 158 ~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~-~~~----------~~~~~~~~~~~~~~~~~ 226 (279)
T cd05633 158 THGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDR----------MTLTVNVELPDSFSPEL 226 (279)
T ss_pred CcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHH-HHH----------HhhcCCcCCccccCHHH
Confidence 88999999986 4568999999999999999999999986543222110 000 00011122333344567
Q ss_pred HHHHHhcccccCCCCC-----CHHHHHHH
Q 040814 612 IHAGLLCVHDQAVNRP-----TMADVVSC 635 (664)
Q Consensus 612 ~~l~~~Cl~~dP~~RP-----t~~evl~~ 635 (664)
.+++.+||+.||++|| +++++++.
T Consensus 227 ~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 227 KSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred HHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 7888899999999999 59998875
No 208
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.94 E-value=4.2e-27 Score=223.92 Aligned_cols=212 Identities=22% Similarity=0.228 Sum_probs=163.8
Q ss_pred HhcCccccceeccCCCcCEEEEE-EcCCcEEEEEeccc----------------------ceEEEEeEeecC-----Cee
Q 040814 417 ATNNFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRLSG----------------------RTIRLMGCSLHG-----AER 468 (664)
Q Consensus 417 ~t~~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~~~~----------------------~~v~l~g~~~~~-----~~~ 468 (664)
..++|.+.+.||+|||+.||.++ +.+++.+|+|++.- +++++++++..+ .+.
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 34678999999999999999998 45689999998842 245666655433 348
Q ss_pred EEEEeccCCCchhHHhhcccc-cCCCCHHHHHHHHHHHHHHHHHhhhcC--cccccccccccc-----------------
Q 040814 469 ILVYEFMPNKSLDFFIFDSVK-KKQLNWSKRITIIEGIAQGLIYLHKYS--RLRMNESKVNTN----------------- 528 (664)
Q Consensus 469 ~lV~Ey~~~gsL~~~l~~~~~-~~~l~~~~~~~I~~~ia~gL~yLH~~~--~~h~d~~~~n~~----------------- 528 (664)
+|+++|...|+|.+.+..... +..+++.+.+.|+.+|++||++||+.. ..|+|++|.|.-
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~ 178 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQ 178 (302)
T ss_pred EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccc
Confidence 999999999999999965433 448999999999999999999999988 899999999810
Q ss_pred ------------------cccccCCccchhhhc---cCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHh
Q 040814 529 ------------------RVVGTYGYMAPEYAM---NGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWK 587 (664)
Q Consensus 529 ------------------~~~Gt~~Y~APE~~~---~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~ 587 (664)
.-.-|..|.|||.+. +..+++++|||||||+||+|+.|..||+..-+
T Consensus 179 a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~------------ 246 (302)
T KOG2345|consen 179 APIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ------------ 246 (302)
T ss_pred cceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh------------
Confidence 012467799999885 46689999999999999999999999964221
Q ss_pred cCChh--HhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhccc
Q 040814 588 EGKAS--ELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNN 640 (664)
Q Consensus 588 ~~~~~--~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 640 (664)
+|... .+....+..+-.....+.+.+++.+|++.||.+||++.+++..++.+.
T Consensus 247 ~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 247 QGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred cCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 12111 111222222222235677889999999999999999999999887653
No 209
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.94 E-value=1.8e-26 Score=249.78 Aligned_cols=151 Identities=21% Similarity=0.270 Sum_probs=133.8
Q ss_pred CccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEEe
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVYE 473 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~E 473 (664)
.|+..++||+|+||.||+|+.. +++.||+|++.+ +++++++.+.+++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5788999999999999999974 488999998753 26899999999999999999
Q ss_pred ccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc-------------------------
Q 040814 474 FMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN------------------------- 528 (664)
Q Consensus 474 y~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~------------------------- 528 (664)
||++|+|.+++.. ...+++.....++.||+.||.|||+.+++|+|+++.|.-
T Consensus 82 ~~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~ 158 (382)
T cd05625 82 YIPGGDMMSLLIR---MGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 158 (382)
T ss_pred CCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCcccccccccc
Confidence 9999999999843 357899999999999999999999999999999887710
Q ss_pred ------------------------------------------------cccccCCccchhhhccCCCCccchHHHHHHHH
Q 040814 529 ------------------------------------------------RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLL 560 (664)
Q Consensus 529 ------------------------------------------------~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL 560 (664)
..+||+.|||||++.+..++.++|||||||+|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil 238 (382)
T cd05625 159 YYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 238 (382)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHH
Confidence 13589999999999999999999999999999
Q ss_pred HHHHhCCCCCCCC
Q 040814 561 LEIVSGRKNNNCY 573 (664)
Q Consensus 561 ~ElltG~~p~~~~ 573 (664)
|||++|+.||...
T Consensus 239 ~elltG~~Pf~~~ 251 (382)
T cd05625 239 YEMLVGQPPFLAQ 251 (382)
T ss_pred HHHHhCCCCCCCC
Confidence 9999999999654
No 210
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.94 E-value=8e-26 Score=237.28 Aligned_cols=213 Identities=19% Similarity=0.255 Sum_probs=159.0
Q ss_pred cCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-----------------------ceEEEEeEeecCCeeEEEEec
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-----------------------RTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV~Ey 474 (664)
++|...++||+|+||.||+|+.+ +++.||+|+++. +++++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 56888999999999999999975 488999998752 368999999999999999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------c
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------N 528 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~ 528 (664)
+++ +|..++.. ....+++..+..++.||+.||.|||+.+++|+|+++.|. .
T Consensus 86 ~~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 162 (309)
T cd07872 86 LDK-DLKQYMDD--CGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYS 162 (309)
T ss_pred CCC-CHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCccccc
Confidence 985 78887743 234689999999999999999999999999999998771 1
Q ss_pred cccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCCh---------hHhhhhh
Q 040814 529 RVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKA---------SELMEAA 598 (664)
Q Consensus 529 ~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~---------~~~~d~~ 598 (664)
...+|+.|+|||.+.+ ..++.++|||||||++|||+||+.||...+..+....+......... .+..+..
T Consensus 163 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
T cd07872 163 NEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYN 242 (309)
T ss_pred cccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhh
Confidence 2346788999999865 56899999999999999999999999755433322222111110000 0000000
Q ss_pred hCCC-------CCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 599 LDGP-------CPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 599 ~~~~-------~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
.... ........+.+++.+|++.||.+|||+.|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 243 FPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred cCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 0000 00112345678889999999999999999986
No 211
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.94 E-value=1.2e-25 Score=231.00 Aligned_cols=209 Identities=19% Similarity=0.201 Sum_probs=161.5
Q ss_pred HHHHHhcCcccccee--ccCCCcCEEEEEEc-CCcEEEEEeccc------------------ceEEEEeEeecCCeeEEE
Q 040814 413 TIAAATNNFSTTNKL--GEGGFGPVYKGKLL-DGQVIAVKRLSG------------------RTIRLMGCSLHGAERILV 471 (664)
Q Consensus 413 ~i~~~t~~~~~~~~l--g~G~fg~Vy~~~~~-~~~~vavK~~~~------------------~~v~l~g~~~~~~~~~lV 471 (664)
++....++|++.+.+ |+|+||.||++..+ +++.+|+|.+.+ +++++++++..++..++|
T Consensus 8 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv 87 (267)
T PHA03390 8 ELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAIEPMVHQLMKDNPNFIKLYYSVTTLKGHVLI 87 (267)
T ss_pred HHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchhhHHHHHHhhcCCCEEEEEEEEecCCeeEEE
Confidence 344445677776776 99999999999974 488899998743 368999999999999999
Q ss_pred EeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-----------------------c
Q 040814 472 YEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-----------------------N 528 (664)
Q Consensus 472 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-----------------------~ 528 (664)
|||+++++|.+++.. ...+++..+..++.||++||.|||+.+.+|+|+++.|. .
T Consensus 88 ~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~ 164 (267)
T PHA03390 88 MDYIKDGDLFDLLKK---EGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPS 164 (267)
T ss_pred EEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCCc
Confidence 999999999999943 34899999999999999999999999999999888771 1
Q ss_pred cccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHH
Q 040814 529 RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENEL 608 (664)
Q Consensus 529 ~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 608 (664)
...|+..|+|||++.+..++.++|||||||++|||++|+.||....... ........ .... ....+....
T Consensus 165 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~-~~~~~~~~-------~~~~--~~~~~~~~~ 234 (267)
T PHA03390 165 CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE-LDLESLLK-------RQQK--KLPFIKNVS 234 (267)
T ss_pred cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcch-hhHHHHHH-------hhcc--cCCcccccC
Confidence 1246788999999998899999999999999999999999987432221 11110000 0000 111222344
Q ss_pred HHHHHHHHhcccccCCCCCC-HHHHHH
Q 040814 609 LRCIHAGLLCVHDQAVNRPT-MADVVS 634 (664)
Q Consensus 609 ~~l~~l~~~Cl~~dP~~RPt-~~evl~ 634 (664)
..+.+++.+||+.+|.+||+ ++|+++
T Consensus 235 ~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 235 KNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred HHHHHHHHHHhccChhhCCchHHHHhc
Confidence 56778888999999999996 688874
No 212
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.94 E-value=9.8e-26 Score=229.52 Aligned_cols=201 Identities=22% Similarity=0.276 Sum_probs=157.7
Q ss_pred CccccceeccCCCcCEEEEEEcC-CcEEEEEeccc------------------------ceEEEEeEeec-CCeeEEEEe
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG------------------------RTIRLMGCSLH-GAERILVYE 473 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~------------------------~~v~l~g~~~~-~~~~~lV~E 473 (664)
+|++.+.||+|++|.||++..+. ++.||+|++.. +++++.+.+.. ....++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 47889999999999999999754 78999998742 25777776654 345789999
Q ss_pred ccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------
Q 040814 474 FMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-------------------------- 527 (664)
Q Consensus 474 y~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-------------------------- 527 (664)
|+++++|.+++... ....+++.++..++.|++.||.|||+.+.+|.|+++.|.
T Consensus 81 ~~~~~~l~~~l~~~-~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~ 159 (257)
T cd08223 81 FCEGGDLYHKLKEQ-KGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMA 159 (257)
T ss_pred ccCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccCCcc
Confidence 99999999999642 345689999999999999999999999999999998871
Q ss_pred ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHH
Q 040814 528 NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENE 607 (664)
Q Consensus 528 ~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 607 (664)
....+++.|+|||++.+..++.++|||||||+++||++|+.||...+... .. +....+. ....+...
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~---~~-~~~~~~~---------~~~~~~~~ 226 (257)
T cd08223 160 STLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNS---LV-YRIIEGK---------LPPMPKDY 226 (257)
T ss_pred ccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH---HH-HHHHhcC---------CCCCcccc
Confidence 12347789999999999999999999999999999999999986432111 10 0011110 11223344
Q ss_pred HHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 608 LLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 608 ~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
...+.+++.+||+.+|++|||+.++++
T Consensus 227 ~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 227 SPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred CHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 566888999999999999999999986
No 213
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.94 E-value=3e-26 Score=232.64 Aligned_cols=203 Identities=21% Similarity=0.230 Sum_probs=166.9
Q ss_pred cCccccceeccCCCcCEEEEEEcC-CcEEEEEecccc-------------------------eEEEEeEeecCCeeEEEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSGR-------------------------TIRLMGCSLHGAERILVY 472 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~~-------------------------~v~l~g~~~~~~~~~lV~ 472 (664)
++|+..+.||.|.-|+||++++++ +..+|+|++.+. +..|++.+..++..+|||
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 345667999999999999999966 689999999763 478999999999999999
Q ss_pred eccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc--------------------------
Q 040814 473 EFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN-------------------------- 526 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n-------------------------- 526 (664)
|||+||+|...++. ...+.+++..+.-++.+|+.||+|||-.|++-+|+||+|
T Consensus 157 eyCpGGdL~~Lrqk-Qp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~ 235 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQK-QPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTL 235 (459)
T ss_pred ecCCCccHHHHHhh-CCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCee
Confidence 99999999988754 456789999999999999999999999999998888877
Q ss_pred --------------------------------------------------------cccccccCCccchhhhccCCCCcc
Q 040814 527 --------------------------------------------------------TNRVVGTYGYMAPEYAMNGIVSMK 550 (664)
Q Consensus 527 --------------------------------------------------------~~~~~Gt~~Y~APE~~~~~~~s~k 550 (664)
.+..+||-.|+|||++.+...+.+
T Consensus 236 ~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsA 315 (459)
T KOG0610|consen 236 VKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSA 315 (459)
T ss_pred eccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCch
Confidence 112468899999999999999999
Q ss_pred chHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCC--
Q 040814 551 ADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPT-- 628 (664)
Q Consensus 551 sDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-- 628 (664)
+|.|+|||+||||+.|+.||.+.+..+.+. .++-+.+.-+........+.+++.+.|.+||.+|.-
T Consensus 316 VDWWtfGIflYEmLyG~TPFKG~~~~~Tl~------------NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~ 383 (459)
T KOG0610|consen 316 VDWWTFGIFLYEMLYGTTPFKGSNNKETLR------------NIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSK 383 (459)
T ss_pred hhHHHHHHHHHHHHhCCCCcCCCCchhhHH------------HHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccc
Confidence 999999999999999999998876655432 222222222222344566778888899999999998
Q ss_pred --HHHHHH
Q 040814 629 --MADVVS 634 (664)
Q Consensus 629 --~~evl~ 634 (664)
+.||-+
T Consensus 384 rGA~eIK~ 391 (459)
T KOG0610|consen 384 RGAAEIKR 391 (459)
T ss_pred cchHHhhc
Confidence 666654
No 214
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.94 E-value=2.6e-26 Score=220.56 Aligned_cols=214 Identities=21% Similarity=0.246 Sum_probs=167.0
Q ss_pred cCccccceeccCCCcCEEEEEE-cCCcEEEEEeccc------------------------ceEEEEeEeecCCeeEEEEe
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKL-LDGQVIAVKRLSG------------------------RTIRLMGCSLHGAERILVYE 473 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~------------------------~~v~l~g~~~~~~~~~lV~E 473 (664)
++|...++||+|.||.||+|+. .+|+.||||++.. +++.+++++.+.+..-||+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 4677789999999999999997 4599999999852 36889999999999999999
Q ss_pred ccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------
Q 040814 474 FMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-------------------------- 527 (664)
Q Consensus 474 y~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-------------------------- 527 (664)
||+. +|+..|.+ +...|+-.++..++.++++||+|||++.++|+|++|.|.
T Consensus 82 fm~t-dLe~vIkd--~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~ 158 (318)
T KOG0659|consen 82 FMPT-DLEVVIKD--KNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQ 158 (318)
T ss_pred eccc-cHHHHhcc--cccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCccc
Confidence 9986 89998854 456899999999999999999999999999999999881
Q ss_pred ccccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhH--------HhcCC-hhHhhhh
Q 040814 528 NRVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYL--------WKEGK-ASELMEA 597 (664)
Q Consensus 528 ~~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~--------~~~~~-~~~~~d~ 597 (664)
...+-|..|.|||.+.+ ..|+..+||||.|||+.||+-|.+-|.+.++-+++..+-.. |.+-. ..+..+-
T Consensus 159 ~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~ 238 (318)
T KOG0659|consen 159 THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKI 238 (318)
T ss_pred ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHH
Confidence 11256788999999987 46999999999999999999998888776665555444321 11110 0111110
Q ss_pred h-----hCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 598 A-----LDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 598 ~-----~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
. .....-.......++++..++..||.+|+|++|++++
T Consensus 239 ~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 239 QQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred hcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 0 0011222344556888999999999999999999875
No 215
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.94 E-value=5.2e-26 Score=235.39 Aligned_cols=214 Identities=19% Similarity=0.263 Sum_probs=157.1
Q ss_pred CccccceeccCCCcCEEEEEEc-CCcEEEEEecc------------------------cceEEEEeEeecCCeeEEEEec
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLS------------------------GRTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~------------------------~~~v~l~g~~~~~~~~~lV~Ey 474 (664)
+|++.+.||+|++|.||+|... +++.||||++. ++++++++++..+...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4778899999999999999985 48999999874 2368999999999999999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------c
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------N 528 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~ 528 (664)
++ ++|.+++........+++..+..++.||+.||.|||+.+++|+|+++.|. .
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYT 159 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCccccc
Confidence 98 68888885443446799999999999999999999999999999888761 1
Q ss_pred cccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhh--------hHHhcCChhHhhhhhh
Q 040814 529 RVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVG--------YLWKEGKASELMEAAL 599 (664)
Q Consensus 529 ~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~--------~~~~~~~~~~~~d~~~ 599 (664)
...+++.|+|||++.+ ..++.++|||||||++|||+||+.||............. ..|.............
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (285)
T cd07861 160 HEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTF 239 (285)
T ss_pred CCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhc
Confidence 1235778999999875 457899999999999999999999986543211110000 0000000000000000
Q ss_pred CC-------CCCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 600 DG-------PCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 600 ~~-------~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
.. ........++.+++.+||+.||++|||+.+|++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 240 PKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred cccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00 000112345678888999999999999999875
No 216
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.93 E-value=1e-25 Score=228.59 Aligned_cols=198 Identities=26% Similarity=0.381 Sum_probs=157.5
Q ss_pred ceeccCCCcCEEEEEEcCCcEEEEEeccc-----------------------ceEEEEeEeecCCeeEEEEeccCCCchh
Q 040814 425 NKLGEGGFGPVYKGKLLDGQVIAVKRLSG-----------------------RTIRLMGCSLHGAERILVYEFMPNKSLD 481 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~~~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV~Ey~~~gsL~ 481 (664)
++||+|+||.||++...+++.||+|++.. +++++++++......++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 46999999999999987799999998652 2688999999999999999999999999
Q ss_pred HHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc----------------------------ccccc
Q 040814 482 FFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN----------------------------RVVGT 533 (664)
Q Consensus 482 ~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~----------------------------~~~Gt 533 (664)
+++... ...+++..+..++.+++.||.|||+.+.+|+|+++.|.- ...++
T Consensus 81 ~~l~~~--~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~ 158 (251)
T cd05041 81 TFLRKK--KNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIP 158 (251)
T ss_pred HHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcce
Confidence 998532 346889999999999999999999999999999988710 01123
Q ss_pred CCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHH
Q 040814 534 YGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRCI 612 (664)
Q Consensus 534 ~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~ 612 (664)
..|+|||.+.++.++.++|||||||++|||+| |..||......... ..+........+......+.
T Consensus 159 ~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~ 225 (251)
T cd05041 159 IKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTR-------------ERIESGYRMPAPQLCPEEIY 225 (251)
T ss_pred eccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHH-------------HHHhcCCCCCCCccCCHHHH
Confidence 45999999998899999999999999999999 78887543221111 11111111222334456788
Q ss_pred HHHHhcccccCCCCCCHHHHHHHHh
Q 040814 613 HAGLLCVHDQAVNRPTMADVVSCLR 637 (664)
Q Consensus 613 ~l~~~Cl~~dP~~RPt~~evl~~L~ 637 (664)
+++.+||+.+|.+|||+.|+++.|+
T Consensus 226 ~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 226 RLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHHhccChhhCcCHHHHHHHhh
Confidence 8999999999999999999999886
No 217
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.93 E-value=5.9e-26 Score=231.06 Aligned_cols=204 Identities=25% Similarity=0.347 Sum_probs=159.0
Q ss_pred cCccccceeccCCCcCEEEEEEcCCcEEEEEeccc--------------------ceEEEEeEeecCCeeEEEEeccCCC
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLDGQVIAVKRLSG--------------------RTIRLMGCSLHGAERILVYEFMPNK 478 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~--------------------~~v~l~g~~~~~~~~~lV~Ey~~~g 478 (664)
++|++.+.||+|+||.||++.. .++.||+|.++. +++++++++.++ ..++||||++++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~~~ 83 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMSKG 83 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcchHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCCCC
Confidence 4578889999999999999975 678899998753 368888888654 579999999999
Q ss_pred chhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-----------------------ccccccCC
Q 040814 479 SLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-----------------------NRVVGTYG 535 (664)
Q Consensus 479 sL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-----------------------~~~~Gt~~ 535 (664)
+|.+++... ....+++..+..++.|++.||.|||+.+.+|+|+++.|. .....+..
T Consensus 84 ~L~~~l~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 162 (254)
T cd05083 84 NLVNFLRTR-GRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVK 162 (254)
T ss_pred CHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceeccccCCCCCCCce
Confidence 999999543 234689999999999999999999999999999998871 01112456
Q ss_pred ccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHHHH
Q 040814 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRCIHA 614 (664)
Q Consensus 536 Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l 614 (664)
|+|||.+.+..++.++|||||||++|||++ |+.||......+. . +.+........+......+.++
T Consensus 163 y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~---~----------~~~~~~~~~~~~~~~~~~~~~l 229 (254)
T cd05083 163 WTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEV---K----------ECVEKGYRMEPPEGCPADVYVL 229 (254)
T ss_pred ecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHH---H----------HHHhCCCCCCCCCcCCHHHHHH
Confidence 999999998899999999999999999998 8988864322111 0 0111111111122334567788
Q ss_pred HHhcccccCCCCCCHHHHHHHHhc
Q 040814 615 GLLCVHDQAVNRPTMADVVSCLRQ 638 (664)
Q Consensus 615 ~~~Cl~~dP~~RPt~~evl~~L~~ 638 (664)
+.+||+.+|++||+++++++.|+.
T Consensus 230 i~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 230 MTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred HHHHcCCChhhCcCHHHHHHHHcc
Confidence 899999999999999999999875
No 218
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.93 E-value=1.3e-25 Score=228.61 Aligned_cols=198 Identities=17% Similarity=0.246 Sum_probs=159.7
Q ss_pred CccccceeccCCCcCEEEEEEc-CCcEEEEEecc------------------------cceEEEEeEeecCCeeEEEEec
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLS------------------------GRTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~------------------------~~~v~l~g~~~~~~~~~lV~Ey 474 (664)
+|+..+.||+|+||.+|++... +++.||+|++. ++++++.+++...+..++|+||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 4788899999999999999974 48899999774 2368899999999999999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------c
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------N 528 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~ 528 (664)
+++++|.+++... ....+++..+..++.|++.||.|||+.+.+|.++++.|. .
T Consensus 81 ~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~ 159 (256)
T cd08218 81 CEGGDLYKKINAQ-RGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELAR 159 (256)
T ss_pred CCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhh
Confidence 9999999988532 234689999999999999999999999999998887661 1
Q ss_pred cccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCC---CCCH
Q 040814 529 RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDG---PCPE 605 (664)
Q Consensus 529 ~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~ 605 (664)
...|++.|+|||++.+..++.++|||||||+++||++|+.|+..... .+.++..+.+ ..+.
T Consensus 160 ~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~----------------~~~~~~~~~~~~~~~~~ 223 (256)
T cd08218 160 TCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM----------------KNLVLKIIRGSYPPVSS 223 (256)
T ss_pred hccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCH----------------HHHHHHHhcCCCCCCcc
Confidence 13477889999999988999999999999999999999999753211 1112222211 1223
Q ss_pred HHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 606 NELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 606 ~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
.....+.+++.+||+.+|++||+|.+|++
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 224 HYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred cCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 34456788888999999999999999986
No 219
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.93 E-value=8.3e-26 Score=235.87 Aligned_cols=201 Identities=22% Similarity=0.316 Sum_probs=160.5
Q ss_pred cCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc----------------------ceEEEEeEeecCCeeEEEEecc
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG----------------------RTIRLMGCSLHGAERILVYEFM 475 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~----------------------~~v~l~g~~~~~~~~~lV~Ey~ 475 (664)
.+|+..+.||+|+||.||+|... +++.||+|.+.. +++++++++..++..++||||+
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 98 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence 57888999999999999999974 589999998842 3689999999999999999999
Q ss_pred CCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------cc
Q 040814 476 PNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NR 529 (664)
Q Consensus 476 ~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~ 529 (664)
++++|.+++. ...+++..+..++.|++.||.|||+.+++|+|+++.|. ..
T Consensus 99 ~~~~L~~~~~----~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~ 174 (297)
T cd06656 99 AGGSLTDVVT----ETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST 174 (297)
T ss_pred CCCCHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccCcCc
Confidence 9999999983 34689999999999999999999999999999888761 12
Q ss_pred ccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHH
Q 040814 530 VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELL 609 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 609 (664)
..+++.|+|||.+.+..++.++|||||||++|||++|+.||...+........ ...+ ......+.....
T Consensus 175 ~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~---~~~~--------~~~~~~~~~~~~ 243 (297)
T cd06656 175 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI---ATNG--------TPELQNPERLSA 243 (297)
T ss_pred ccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeee---ccCC--------CCCCCCccccCH
Confidence 35677899999999988999999999999999999999998654322111000 0000 000011222334
Q ss_pred HHHHHHHhcccccCCCCCCHHHHHH
Q 040814 610 RCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 610 ~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
.+.+++.+||+.+|++||+++++++
T Consensus 244 ~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 244 VFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhc
Confidence 5677888999999999999999987
No 220
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.93 E-value=1.1e-25 Score=230.71 Aligned_cols=203 Identities=23% Similarity=0.384 Sum_probs=161.6
Q ss_pred CccccceeccCCCcCEEEEEE-cCCcEEEEEeccc----------------------------ceEEEEeEeecCCeeEE
Q 040814 420 NFSTTNKLGEGGFGPVYKGKL-LDGQVIAVKRLSG----------------------------RTIRLMGCSLHGAERIL 470 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~----------------------------~~v~l~g~~~~~~~~~l 470 (664)
+|+..+.||+|+||.||+|.. .+++.||+|++.. +++++++++.+++..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477789999999999999986 4589999998742 36889999999999999
Q ss_pred EEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-----------------------
Q 040814 471 VYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT----------------------- 527 (664)
Q Consensus 471 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~----------------------- 527 (664)
|+||+++++|.+++. +...+++..+..++.||+.||.|||+.+.+|+++++.|.
T Consensus 81 v~e~~~~~~L~~~l~---~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~ 157 (268)
T cd06630 81 FVEWMAGGSVSHLLS---KYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAK 157 (268)
T ss_pred EEeccCCCcHHHHHH---HhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccccccc
Confidence 999999999999984 345789999999999999999999999999998887661
Q ss_pred --------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhh
Q 040814 528 --------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAAL 599 (664)
Q Consensus 528 --------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 599 (664)
....|+..|+|||.+.+..++.++||||+|+++|||++|+.||...........+ .+......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~---------~~~~~~~~ 228 (268)
T cd06630 158 GTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALI---------FKIASATT 228 (268)
T ss_pred cccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHH---------HHHhccCC
Confidence 0124677899999999888999999999999999999999998643322111111 01111111
Q ss_pred CCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 600 DGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
....+......+.+++.+||+.+|++|||+.++++
T Consensus 229 ~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 229 APSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred CCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 22344445567888999999999999999999875
No 221
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.93 E-value=6.6e-26 Score=234.51 Aligned_cols=202 Identities=20% Similarity=0.299 Sum_probs=157.0
Q ss_pred ccccceeccCCCcCEEEEEEcC-CcEEEEEeccc----------------------ceEEEEeEeecCCeeEEEEeccCC
Q 040814 421 FSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG----------------------RTIRLMGCSLHGAERILVYEFMPN 477 (664)
Q Consensus 421 ~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~----------------------~~v~l~g~~~~~~~~~lV~Ey~~~ 477 (664)
|++.+.||+|+||.||+|.... +..+++|.+.. +++++++++..++..++||||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 5677899999999999999865 78899998742 368999999999999999999999
Q ss_pred CchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------cccc
Q 040814 478 KSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NRVV 531 (664)
Q Consensus 478 gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~~~ 531 (664)
++|..++.. ....+++..+..++.||+.||.|||+.+++|+|+++.|. ....
T Consensus 87 ~~l~~~~~~--~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 164 (282)
T cd06643 87 GAVDAVMLE--LERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI 164 (282)
T ss_pred CcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccccccccccc
Confidence 999988853 245799999999999999999999999999999998872 1234
Q ss_pred ccCCccchhhhc-----cCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHH
Q 040814 532 GTYGYMAPEYAM-----NGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPEN 606 (664)
Q Consensus 532 Gt~~Y~APE~~~-----~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 606 (664)
++..|+|||++. +..++.++|||||||++|||++|+.||......+. .... ...... ....+..
T Consensus 165 ~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~---~~~~-~~~~~~-------~~~~~~~ 233 (282)
T cd06643 165 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRV---LLKI-AKSEPP-------TLAQPSR 233 (282)
T ss_pred ccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHH---HHHH-hhcCCC-------CCCCccc
Confidence 778899999984 45578899999999999999999999864332111 0000 000000 0011222
Q ss_pred HHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 607 ELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 607 ~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
....+.+++.+||+.+|.+||++.++++.
T Consensus 234 ~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 234 WSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 33567788889999999999999998754
No 222
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.93 E-value=6.9e-26 Score=234.03 Aligned_cols=205 Identities=20% Similarity=0.281 Sum_probs=159.6
Q ss_pred hcCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc----------------------ceEEEEeEeecCCeeEEEEec
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG----------------------RTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~----------------------~~v~l~g~~~~~~~~~lV~Ey 474 (664)
.++|++.+.||+|+||.||+|... +++.+|+|.++. +++++++.+..+...++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 467888999999999999999975 489999998742 378999999999999999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------c
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------N 528 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~ 528 (664)
+++++|..++.. ....+++..+..++.|++.||.|||+.+++|.|+++.|. .
T Consensus 84 ~~~~~L~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~ 161 (280)
T cd06611 84 CDGGALDSIMLE--LERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRD 161 (280)
T ss_pred cCCCcHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhcccccccc
Confidence 999999999853 235799999999999999999999999999999888761 1
Q ss_pred cccccCCccchhhhc-----cCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCC
Q 040814 529 RVVGTYGYMAPEYAM-----NGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPC 603 (664)
Q Consensus 529 ~~~Gt~~Y~APE~~~-----~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 603 (664)
...|++.|+|||.+. ...++.++|||||||++|||++|+.||........ ... ...... +. ...
T Consensus 162 ~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~---~~~-~~~~~~-----~~--~~~ 230 (280)
T cd06611 162 TFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRV---LLK-ILKSEP-----PT--LDQ 230 (280)
T ss_pred eeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHH---HHH-HhcCCC-----CC--cCC
Confidence 124788899999985 34578899999999999999999999864322111 100 000000 00 011
Q ss_pred CHHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 604 PENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 604 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
+......+.+++..||+.+|.+||++.++++.
T Consensus 231 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 231 PSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred cccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 22233456778888999999999999999764
No 223
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.93 E-value=1.1e-25 Score=229.20 Aligned_cols=199 Identities=27% Similarity=0.317 Sum_probs=155.1
Q ss_pred ceeccCCCcCEEEEEEcC--C--cEEEEEeccc-----------------------ceEEEEeEeecCCeeEEEEeccCC
Q 040814 425 NKLGEGGFGPVYKGKLLD--G--QVIAVKRLSG-----------------------RTIRLMGCSLHGAERILVYEFMPN 477 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~~--~--~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV~Ey~~~ 477 (664)
+.||+|++|.||+|.+.+ + ..||||.+.. +++++++.+.. ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999999743 3 3699998753 36888888887 889999999999
Q ss_pred CchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-----------------------------c
Q 040814 478 KSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-----------------------------N 528 (664)
Q Consensus 478 gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-----------------------------~ 528 (664)
++|.+++.+... ..+++.....++.|++.||.|||+.+.+|.++++.|. .
T Consensus 80 ~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 158 (257)
T cd05040 80 GSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEE 158 (257)
T ss_pred CcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceeccc
Confidence 999999965322 5789999999999999999999999999999988871 0
Q ss_pred cccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHH
Q 040814 529 RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENE 607 (664)
Q Consensus 529 ~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 607 (664)
...++..|+|||++.+..++.++|||||||++|||++ |+.|+......+.. ...... ......+...
T Consensus 159 ~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~---~~~~~~---------~~~~~~~~~~ 226 (257)
T cd05040 159 HLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQIL---KKIDKE---------GERLERPEAC 226 (257)
T ss_pred CCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHH---HHHHhc---------CCcCCCCccC
Confidence 1235568999999998899999999999999999999 99998543222111 111000 0011122233
Q ss_pred HHHHHHHHHhcccccCCCCCCHHHHHHHHh
Q 040814 608 LLRCIHAGLLCVHDQAVNRPTMADVVSCLR 637 (664)
Q Consensus 608 ~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~ 637 (664)
+..+.+++.+||+.+|++||++.++++.|.
T Consensus 227 ~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 227 PQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred CHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 456778889999999999999999999885
No 224
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.93 E-value=6.7e-26 Score=232.47 Aligned_cols=201 Identities=26% Similarity=0.401 Sum_probs=155.7
Q ss_pred ceeccCCCcCEEEEEEcC-------CcEEEEEeccc-----------------------ceEEEEeEeecCCeeEEEEec
Q 040814 425 NKLGEGGFGPVYKGKLLD-------GQVIAVKRLSG-----------------------RTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~~-------~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV~Ey 474 (664)
+.||+|+||.||+|...+ ++.+|+|.+.+ +++++++++...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 369999999999998743 25789987642 368999999998999999999
Q ss_pred cCCCchhHHhhccc----ccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc----------------------
Q 040814 475 MPNKSLDFFIFDSV----KKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN---------------------- 528 (664)
Q Consensus 475 ~~~gsL~~~l~~~~----~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~---------------------- 528 (664)
+++++|.+++.... ....+++..+..++.|++.||.|||+.+.+|.|+++.|.-
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~ 160 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARD 160 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccccc
Confidence 99999999996432 2245889999999999999999999999999988877610
Q ss_pred -----------cccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhh
Q 040814 529 -----------RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELME 596 (664)
Q Consensus 529 -----------~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d 596 (664)
...++..|+|||++.+..++.++|||||||++|||++ |+.||...... ....+. .
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~---~~~~~~----------~ 227 (269)
T cd05044 161 IYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ---EVLQHV----------T 227 (269)
T ss_pred cccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH---HHHHHH----------h
Confidence 0122467999999999999999999999999999998 99998533211 111111 1
Q ss_pred hhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhc
Q 040814 597 AALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQ 638 (664)
Q Consensus 597 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 638 (664)
.......+......+.+++.+||+.+|.+||++.+|++.|++
T Consensus 228 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 228 AGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred cCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 111112223345667889999999999999999999999863
No 225
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.93 E-value=3.7e-26 Score=242.31 Aligned_cols=206 Identities=16% Similarity=0.166 Sum_probs=153.8
Q ss_pred cCccccceeccCCCcCEEEEEEcC-CcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVY 472 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~ 472 (664)
++|++.+.||+|+||.||+++... ++.||+|++.+ +++++++++..++..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 578999999999999999999754 88999998743 2578899999999999999
Q ss_pred eccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-------------------------
Q 040814 473 EFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------------- 527 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------------- 527 (664)
||+++|+|..++... ...+++..+..++.||+.||.|||+.+++|+|+++.|.
T Consensus 81 Ey~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 158 (331)
T cd05624 81 DYYVGGDLLTLLSKF--EDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTV 158 (331)
T ss_pred eCCCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCce
Confidence 999999999999532 35789999999999999999999999999999998771
Q ss_pred --ccccccCCccchhhhcc-----CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhC
Q 040814 528 --NRVVGTYGYMAPEYAMN-----GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALD 600 (664)
Q Consensus 528 --~~~~Gt~~Y~APE~~~~-----~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 600 (664)
....||+.|||||++.+ +.++.++|||||||+||||++|+.||...+..+. ............ +.
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~---~~~i~~~~~~~~-----~p 230 (331)
T cd05624 159 QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET---YGKIMNHEERFQ-----FP 230 (331)
T ss_pred eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHH---HHHHHcCCCccc-----CC
Confidence 11358999999999875 5688999999999999999999999864332111 111111000000 00
Q ss_pred CCCCHHHHHHHHHHHHhcccccCCC--CCCHHHHHHH
Q 040814 601 GPCPENELLRCIHAGLLCVHDQAVN--RPTMADVVSC 635 (664)
Q Consensus 601 ~~~~~~~~~~l~~l~~~Cl~~dP~~--RPt~~evl~~ 635 (664)
........++.+++.+|++.++.+ |++++++++.
T Consensus 231 -~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 231 -SHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred -CccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 001112345666666777654433 5688888754
No 226
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.93 E-value=1e-25 Score=232.70 Aligned_cols=207 Identities=24% Similarity=0.357 Sum_probs=161.3
Q ss_pred cCccccceeccCCCcCEEEEEEcC-Cc----EEEEEeccc-----------------------ceEEEEeEeecCCeeEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD-GQ----VIAVKRLSG-----------------------RTIRLMGCSLHGAERIL 470 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~----~vavK~~~~-----------------------~~v~l~g~~~~~~~~~l 470 (664)
++|+..+.||+|+||.||+|..++ ++ .+|+|.+.+ +++++++++.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 467788999999999999998743 33 689998743 36889998887 78899
Q ss_pred EEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc----------------------
Q 040814 471 VYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN---------------------- 528 (664)
Q Consensus 471 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~---------------------- 528 (664)
||||+++|+|.+++... ...+++..+..++.||+.||+|||+.+++|+|+++.|.-
T Consensus 86 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~ 163 (279)
T cd05057 86 ITQLMPLGCLLDYVRNH--KDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDE 163 (279)
T ss_pred EEecCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCcc
Confidence 99999999999999542 346999999999999999999999999999999987710
Q ss_pred ------cccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCC
Q 040814 529 ------RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDG 601 (664)
Q Consensus 529 ------~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 601 (664)
...++..|+|||.+....++.++||||||+++||+++ |+.||......+. . +.+......
T Consensus 164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~---~----------~~~~~~~~~ 230 (279)
T cd05057 164 KEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEI---P----------DLLEKGERL 230 (279)
T ss_pred cceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHH---H----------HHHhCCCCC
Confidence 0112457999999988899999999999999999999 9999864322111 1 111111111
Q ss_pred CCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhcccc
Q 040814 602 PCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQ 641 (664)
Q Consensus 602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~ 641 (664)
..+......+.+++.+||..+|.+||++.++++.|++...
T Consensus 231 ~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 231 PQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 2223334567788889999999999999999999998753
No 227
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.93 E-value=1.9e-26 Score=247.41 Aligned_cols=153 Identities=23% Similarity=0.320 Sum_probs=135.5
Q ss_pred cCccccceeccCCCcCEEEEEEcC-CcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVY 472 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~ 472 (664)
++|+..+.||+|+||.||++..+. ++.||||++++ +++++++.+.+++..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 478889999999999999999854 89999998852 2688999999999999999
Q ss_pred eccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-------------------------
Q 040814 473 EFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------------- 527 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------------- 527 (664)
|||++|+|.+++. +...+++..+..++.||+.||.|||+.+++|+|+++.|.
T Consensus 81 E~~~gg~L~~~l~---~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~ 157 (360)
T cd05627 81 EFLPGGDMMTLLM---KKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRT 157 (360)
T ss_pred eCCCCccHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCccccccccc
Confidence 9999999999984 346799999999999999999999999999999988771
Q ss_pred ------------------------------------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCC
Q 040814 528 ------------------------------------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNN 571 (664)
Q Consensus 528 ------------------------------------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~ 571 (664)
...+||+.|||||++.+..++.++|||||||++|||++|+.||.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~ 237 (360)
T cd05627 158 EFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC 237 (360)
T ss_pred ccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCC
Confidence 01358999999999999999999999999999999999999986
Q ss_pred CCC
Q 040814 572 CYD 574 (664)
Q Consensus 572 ~~~ 574 (664)
...
T Consensus 238 ~~~ 240 (360)
T cd05627 238 SET 240 (360)
T ss_pred CCC
Confidence 543
No 228
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.93 E-value=1.3e-25 Score=229.44 Aligned_cols=201 Identities=27% Similarity=0.334 Sum_probs=151.5
Q ss_pred ceeccCCCcCEEEEEEcC----CcEEEEEeccc-----------------------ceEEEEeEee-cCCeeEEEEeccC
Q 040814 425 NKLGEGGFGPVYKGKLLD----GQVIAVKRLSG-----------------------RTIRLMGCSL-HGAERILVYEFMP 476 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~~----~~~vavK~~~~-----------------------~~v~l~g~~~-~~~~~~lV~Ey~~ 476 (664)
+.||+|+||.||+|...+ ...||+|++.. +++++++++. .+...++|+||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 468999999999998632 46799998742 2588889776 4556789999999
Q ss_pred CCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-----------------------------
Q 040814 477 NKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT----------------------------- 527 (664)
Q Consensus 477 ~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~----------------------------- 527 (664)
+|+|.+++... ...+++..+..++.||+.||.|||+.+.+|+|+++.|.
T Consensus 81 ~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 158 (262)
T cd05058 81 HGDLRNFIRSE--THNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHN 158 (262)
T ss_pred CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeecc
Confidence 99999999532 34578888899999999999999999999999988871
Q ss_pred -ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCC-CCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCH
Q 040814 528 -NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGR-KNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPE 605 (664)
Q Consensus 528 -~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 605 (664)
....++..|+|||.+.+..++.++|||||||++|||++|. +|+.... ........... .....+.
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~---~~~~~~~~~~~----------~~~~~~~ 225 (262)
T cd05058 159 HTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD---SFDITVYLLQG----------RRLLQPE 225 (262)
T ss_pred cccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC---HHHHHHHHhcC----------CCCCCCC
Confidence 0112355799999999889999999999999999999964 4553221 11111111110 0111122
Q ss_pred HHHHHHHHHHHhcccccCCCCCCHHHHHHHHhccc
Q 040814 606 NELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNN 640 (664)
Q Consensus 606 ~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 640 (664)
..+..+.+++..||+.+|++||++.||++.|+++.
T Consensus 226 ~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 226 YCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred cCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 23456788999999999999999999999998764
No 229
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.93 E-value=1.1e-25 Score=228.97 Aligned_cols=201 Identities=20% Similarity=0.271 Sum_probs=158.7
Q ss_pred CccccceeccCCCcCEEEEEEc-CCcEEEEEeccc------------------------ceEEEEeEeecCCeeEEEEec
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG------------------------RTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~------------------------~~v~l~g~~~~~~~~~lV~Ey 474 (664)
+|+..+.||+|+||.||++... +++.+|+|++.. +++++++.+..++..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 4788899999999999999874 488999998742 256788888888899999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------c
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------N 528 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~ 528 (664)
+++++|.+++... ....+++..+..++.|+++||.|||+.+.+|+|+++.|. .
T Consensus 81 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~ 159 (256)
T cd08220 81 APGGTLAEYIQKR-CNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAY 159 (256)
T ss_pred CCCCCHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcccc
Confidence 9999999999542 234689999999999999999999999999998887661 1
Q ss_pred cccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHH
Q 040814 529 RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENEL 608 (664)
Q Consensus 529 ~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 608 (664)
...|+..|+|||.+.+..++.++||||||+++|||++|+.||...+... .... ... ......+....
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~---~~~~---------~~~-~~~~~~~~~~~ 226 (256)
T cd08220 160 TVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPA---LVLK---------IMS-GTFAPISDRYS 226 (256)
T ss_pred ccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHH---HHHH---------HHh-cCCCCCCCCcC
Confidence 1346778999999998889999999999999999999999986433211 1100 000 00112222344
Q ss_pred HHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 609 LRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 609 ~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
..+.+++.+||+.+|++|||+.|+++
T Consensus 227 ~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 227 PDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred HHHHHHHHHHccCChhhCCCHHHHhh
Confidence 56778889999999999999999986
No 230
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.93 E-value=5.8e-26 Score=234.61 Aligned_cols=218 Identities=23% Similarity=0.323 Sum_probs=162.0
Q ss_pred cCccccceeccCCCcCEEEEEEc-----CCcEEEEEeccc-----------------------ceEEEEeEeec--CCee
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-----DGQVIAVKRLSG-----------------------RTIRLMGCSLH--GAER 468 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-----~~~~vavK~~~~-----------------------~~v~l~g~~~~--~~~~ 468 (664)
++|+..+.||+|+||.||++.+. .++.+|||++.. +++++++++.. +...
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 35667799999999999999863 368999998853 25788888876 5678
Q ss_pred EEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc--------------------
Q 040814 469 ILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN-------------------- 528 (664)
Q Consensus 469 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~-------------------- 528 (664)
++||||+++++|.+++... ...+++..+..++.|++.||+|||+.+++|.|+++.|.-
T Consensus 84 ~lv~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 161 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRH--RDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPE 161 (284)
T ss_pred EEEEecCCCCCHHHHHHhC--ccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEccccccccccc
Confidence 9999999999999999542 336999999999999999999999999999999987710
Q ss_pred ---------cccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCCh---hHhhh
Q 040814 529 ---------RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKA---SELME 596 (664)
Q Consensus 529 ---------~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~d 596 (664)
...++..|+|||.+.+..++.++||||||+++|||++|+.|+....... ............. .+.+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 240 (284)
T cd05038 162 DKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEF-LRMIGIAQGQMIVTRLLELLK 240 (284)
T ss_pred CCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchh-ccccccccccccHHHHHHHHH
Confidence 0112345999999998899999999999999999999999975432111 0000000000001 11111
Q ss_pred hhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhcc
Q 040814 597 AALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQN 639 (664)
Q Consensus 597 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 639 (664)
.....+.+.....++.+++.+||+.+|++||||.||+++|+.+
T Consensus 241 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 241 EGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred cCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 1111222333446788899999999999999999999999875
No 231
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.93 E-value=1.2e-25 Score=230.24 Aligned_cols=198 Identities=23% Similarity=0.353 Sum_probs=157.9
Q ss_pred ccccceeccCCCcCEEEEEEc-CCcEEEEEecc-------------------------------cceEEEEeEeecCCee
Q 040814 421 FSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLS-------------------------------GRTIRLMGCSLHGAER 468 (664)
Q Consensus 421 ~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~-------------------------------~~~v~l~g~~~~~~~~ 468 (664)
|.+...||+|++|.||+|... +++.+|+|.+. ++++++++++.+.+..
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL 81 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence 667789999999999999874 48899999663 2368999999999999
Q ss_pred EEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc---------------------
Q 040814 469 ILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------- 527 (664)
Q Consensus 469 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------- 527 (664)
++||||+++++|..++. ....+++..+..++.|++.||.|||+.+.+|+|+++.|.
T Consensus 82 ~lv~e~~~~~~L~~~l~---~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06628 82 NIFLEYVPGGSVAALLN---NYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEA 158 (267)
T ss_pred EEEEEecCCCCHHHHHH---hccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCccccc
Confidence 99999999999999994 346789999999999999999999999999998887761
Q ss_pred -----------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhh
Q 040814 528 -----------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELME 596 (664)
Q Consensus 528 -----------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d 596 (664)
....|+..|+|||.+.+..++.++|||||||++|||++|+.||........ + ..+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~---~---------~~~~~ 226 (267)
T cd06628 159 NSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQA---I---------FKIGE 226 (267)
T ss_pred ccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHH---H---------HHHhc
Confidence 012467789999999988899999999999999999999999864322110 0 00000
Q ss_pred hhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 597 AALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 597 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
......+......+.+++.+||+.||.+||++.||++
T Consensus 227 -~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 227 -NASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred -cCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 1111223334456778888999999999999999886
No 232
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.93 E-value=7.8e-26 Score=231.83 Aligned_cols=204 Identities=22% Similarity=0.302 Sum_probs=157.1
Q ss_pred cCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc----------------------ceEEEEeEeecCCeeEEEEecc
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG----------------------RTIRLMGCSLHGAERILVYEFM 475 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~----------------------~~v~l~g~~~~~~~~~lV~Ey~ 475 (664)
++|+..+.||+|+||.||+|... +++.||+|.++. +++++++.+..++..++||||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 46778899999999999999874 489999998642 3688999999999999999999
Q ss_pred CCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------cc
Q 040814 476 PNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NR 529 (664)
Q Consensus 476 ~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~ 529 (664)
++++|.+++. ..+.+++.++..++.|++.||.|||+.+++|.|+++.|. ..
T Consensus 89 ~~~~L~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 165 (267)
T cd06645 89 GGGSLQDIYH---VTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKS 165 (267)
T ss_pred CCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCccccccc
Confidence 9999999984 345799999999999999999999999999998887761 12
Q ss_pred ccccCCccchhhhc---cCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHH
Q 040814 530 VVGTYGYMAPEYAM---NGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPEN 606 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~---~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 606 (664)
..|+..|+|||++. ...++.++|||||||++|||++|+.|+.......... ....... ..+.... ...
T Consensus 166 ~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~----~~~~~~~---~~~~~~~--~~~ 236 (267)
T cd06645 166 FIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF----LMTKSNF---QPPKLKD--KMK 236 (267)
T ss_pred ccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHH----hhhccCC---CCCcccc--cCC
Confidence 35788999999984 4568899999999999999999999985432211110 0000000 0000000 001
Q ss_pred HHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 607 ELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 607 ~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
....+.+++.+||+.+|++||++++|++
T Consensus 237 ~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 237 WSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred CCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 2235678888999999999999999875
No 233
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.93 E-value=1e-25 Score=232.92 Aligned_cols=203 Identities=23% Similarity=0.342 Sum_probs=156.1
Q ss_pred cCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc------------------------ceEEEEeEeecCCeeEEEEe
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG------------------------RTIRLMGCSLHGAERILVYE 473 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~------------------------~~v~l~g~~~~~~~~~lV~E 473 (664)
++|++.+.||+|+||.||++... +|+.||+|++.. +++++++++..+...++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 47888999999999999999985 499999998742 36899999999999999999
Q ss_pred ccCCCchhHHhhcc-cccCCCCHHHHHHHHHHHHHHHHHhhhc-Cccccccccccc------------------------
Q 040814 474 FMPNKSLDFFIFDS-VKKKQLNWSKRITIIEGIAQGLIYLHKY-SRLRMNESKVNT------------------------ 527 (664)
Q Consensus 474 y~~~gsL~~~l~~~-~~~~~l~~~~~~~I~~~ia~gL~yLH~~-~~~h~d~~~~n~------------------------ 527 (664)
||+ |+|..++... .....+++..+..++.||+.||.|||+. +.+|+|+++.|.
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~ 159 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVA 159 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccccc
Confidence 997 6888887542 2235799999999999999999999997 899998887651
Q ss_pred -ccccccCCccchhhhcc----CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCC
Q 040814 528 -NRVVGTYGYMAPEYAMN----GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGP 602 (664)
Q Consensus 528 -~~~~Gt~~Y~APE~~~~----~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 602 (664)
....|+..|+|||.+.+ ..++.++|||||||++|||++|+.||...... ..... ..... ....
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~---------~~~~~-~~~~ 227 (283)
T cd06617 160 KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP--FQQLK---------QVVEE-PSPQ 227 (283)
T ss_pred cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC--HHHHH---------HHHhc-CCCC
Confidence 11346788999998864 45789999999999999999999998532211 11110 11110 0111
Q ss_pred CCH-HHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 603 CPE-NELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 603 ~~~-~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
.+. .....+.+++.+||+.+|++||++.++++
T Consensus 228 ~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 228 LPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred CCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111 12355778888999999999999999986
No 234
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.93 E-value=1.6e-25 Score=228.92 Aligned_cols=207 Identities=22% Similarity=0.336 Sum_probs=161.1
Q ss_pred cCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-----------------------ceEEEEeEeecCCeeEEEEec
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-----------------------RTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV~Ey 474 (664)
++|++.+.||+|+||.||+|... +++.+|+|++.. +++++++.+..++..++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 47888999999999999999974 488999998742 258889999999999999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc---------------------------
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------- 527 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------- 527 (664)
+++++|.+++........+++.....++.|++.||.|||+.+++|.++++.|.
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~ 160 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTR 160 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccc
Confidence 99999999996433335789999999999999999999999999998887661
Q ss_pred ---ccccccCCccchhhhccC-CCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCC
Q 040814 528 ---NRVVGTYGYMAPEYAMNG-IVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPC 603 (664)
Q Consensus 528 ---~~~~Gt~~Y~APE~~~~~-~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 603 (664)
....|+..|+|||.+... .++.++|||||||++|||++|+.||......... .. .... . .+......
T Consensus 161 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~--~~-~~~~-~-----~~~~~~~~ 231 (267)
T cd06610 161 KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVL--ML-TLQN-D-----PPSLETGA 231 (267)
T ss_pred cccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhH--HH-HhcC-C-----CCCcCCcc
Confidence 112477889999999876 7899999999999999999999998644322111 00 0000 0 00011110
Q ss_pred -CHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 604 -PENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 604 -~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
.......+.+++.+||+.||++||++.++++
T Consensus 232 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 232 DYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred ccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 1133456778888999999999999999986
No 235
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.93 E-value=1.4e-26 Score=241.91 Aligned_cols=204 Identities=20% Similarity=0.291 Sum_probs=160.4
Q ss_pred hcCccccceeccCCCcCEEEEEEcCCcEEEEEecc-------------------------cceEEEEeEeecCCeeEEEE
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLLDGQVIAVKRLS-------------------------GRTIRLMGCSLHGAERILVY 472 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~-------------------------~~~v~l~g~~~~~~~~~lV~ 472 (664)
-..|++.++||+||.+.||++...+.+.+|+|++. .++|+|++|-..++.++|||
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm 439 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM 439 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence 34678889999999999999998888889988773 13799999999999999999
Q ss_pred eccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc--------------------------
Q 040814 473 EFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN-------------------------- 526 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n-------------------------- 526 (664)
||= ..+|..+|... .....+| .+..+..|++.++.++|++|++|.|++|.|
T Consensus 440 E~G-d~DL~kiL~k~-~~~~~~~-~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVkG~LKLIDFGIA~aI~~DTTsI 516 (677)
T KOG0596|consen 440 ECG-DIDLNKILKKK-KSIDPDW-FLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVKGRLKLIDFGIANAIQPDTTSI 516 (677)
T ss_pred ecc-cccHHHHHHhc-cCCCchH-HHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEeeeEEeeeechhcccCccccce
Confidence 985 56999999542 2334445 778899999999999999999999999998
Q ss_pred -cccccccCCccchhhhccC-----------CCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHh
Q 040814 527 -TNRVVGTYGYMAPEYAMNG-----------IVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASEL 594 (664)
Q Consensus 527 -~~~~~Gt~~Y~APE~~~~~-----------~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (664)
....+||+.||+||.+... +++.++||||+|||||+|+.|+.||..+. +.+ .+...+
T Consensus 517 ~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~-----n~~------aKl~aI 585 (677)
T KOG0596|consen 517 VKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII-----NQI------AKLHAI 585 (677)
T ss_pred eeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH-----HHH------HHHHhh
Confidence 2335799999999999532 25689999999999999999999985321 111 123445
Q ss_pred hhhhhCCCCCHH-HHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 595 MEAALDGPCPEN-ELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 595 ~d~~~~~~~~~~-~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
.++...-++|.. ...++++++..||+.||.+|||+.++++.
T Consensus 586 ~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 586 TDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred cCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 555444344331 12238999999999999999999999863
No 236
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.93 E-value=2.9e-26 Score=237.33 Aligned_cols=213 Identities=19% Similarity=0.239 Sum_probs=156.8
Q ss_pred cCccccceeccCCCcCEEEEEEcC-CcEEEEEeccc------------------------ceEEEEeEeecCCeeEEEEe
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG------------------------RTIRLMGCSLHGAERILVYE 473 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~------------------------~~v~l~g~~~~~~~~~lV~E 473 (664)
++|+..++||+|+||.||+|..++ ++.||+|++.+ +++++++++..+...++|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 468889999999999999999864 89999998742 25778888888899999999
Q ss_pred ccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------
Q 040814 474 FMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-------------------------- 527 (664)
Q Consensus 474 y~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-------------------------- 527 (664)
|+++++|..+.. ....+++..+..++.||++||.|||+.+++|.++++.|.
T Consensus 81 ~~~~~~l~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~ 157 (286)
T cd07846 81 FVDHTVLDDLEK---YPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVY 157 (286)
T ss_pred cCCccHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcccc
Confidence 999999988763 234589999999999999999999999999998887761
Q ss_pred ccccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhc--CChhHh------hhhh
Q 040814 528 NRVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKE--GKASEL------MEAA 598 (664)
Q Consensus 528 ~~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~--~~~~~~------~d~~ 598 (664)
....++..|+|||++.+ ..++.++|||||||++|||++|++||......+....+...... ...... .+..
T Consensus 158 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (286)
T cd07846 158 TDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGM 237 (286)
T ss_pred CcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhcc
Confidence 11346778999999875 45789999999999999999999988643321111000000000 000000 0000
Q ss_pred hCCC---------CCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 599 LDGP---------CPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 599 ~~~~---------~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
.... ........+.+++.+||+.+|++||++.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 238 RLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred ccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 0000 01123456888999999999999999999875
No 237
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.93 E-value=1e-25 Score=237.05 Aligned_cols=203 Identities=20% Similarity=0.214 Sum_probs=160.4
Q ss_pred cCccccceeccCCCcCEEEEEEcC-CcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVY 472 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~ 472 (664)
++|+..+.||+|+||.||++...+ ++.+|+|.+.+ +++++++.+.++...++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 468889999999999999999865 89999998853 2578889999999999999
Q ss_pred eccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc------------------------
Q 040814 473 EFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN------------------------ 528 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~------------------------ 528 (664)
||+++++|.+++... ....+++..+..++.||+.||+|||+.+.+|.|+++.|.-
T Consensus 81 e~~~~~~L~~~~~~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~ 159 (316)
T cd05574 81 DYCPGGELFRLLQRQ-PGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPP 159 (316)
T ss_pred EecCCCCHHHHHHhC-CCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhcccccccc
Confidence 999999999998532 3467999999999999999999999999999998886610
Q ss_pred -------------------------------cccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCC
Q 040814 529 -------------------------------RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEER 577 (664)
Q Consensus 529 -------------------------------~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~ 577 (664)
...||..|+|||++.+..++.++||||||+++|||++|+.||...+...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~ 239 (316)
T cd05574 160 VSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDE 239 (316)
T ss_pred cccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHH
Confidence 1256788999999998889999999999999999999999986443221
Q ss_pred chhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCC----HHHHHH
Q 040814 578 PLNLVGYLWKEGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPT----MADVVS 634 (664)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt----~~evl~ 634 (664)
.. ..+.+..............+.+++.+||+.+|++||| ++|+++
T Consensus 240 ~~------------~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 240 TF------------SNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred HH------------HHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 11 1111111111111124566888889999999999999 666554
No 238
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.93 E-value=2.3e-25 Score=230.48 Aligned_cols=213 Identities=18% Similarity=0.252 Sum_probs=158.6
Q ss_pred cCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc------------------------ceEEEEeEeecCCeeEEEEe
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG------------------------RTIRLMGCSLHGAERILVYE 473 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~------------------------~~v~l~g~~~~~~~~~lV~E 473 (664)
++|+..+.||+|+||.||+|..+ +++.||+|++.. +++++++++..+...++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 46888899999999999999986 489999997631 36889999999999999999
Q ss_pred ccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------
Q 040814 474 FMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-------------------------- 527 (664)
Q Consensus 474 y~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-------------------------- 527 (664)
|++++.|..++. ....+++..+..++.||+.||.|||+.+++|+|+++.|.
T Consensus 81 ~~~~~~l~~~~~---~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 157 (286)
T cd07847 81 YCDHTVLNELEK---NPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDY 157 (286)
T ss_pred ccCccHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcccc
Confidence 999999988763 345699999999999999999999999999999988771
Q ss_pred ccccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcC--ChhHhh---------
Q 040814 528 NRVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEG--KASELM--------- 595 (664)
Q Consensus 528 ~~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~--------- 595 (664)
....++..|+|||.+.+ ..++.++|||||||++|||++|+.||......+....+....... ...+..
T Consensus 158 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (286)
T cd07847 158 TDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGL 237 (286)
T ss_pred cCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccc
Confidence 11235678999999876 568999999999999999999999987544322211111000000 000000
Q ss_pred -hhhhCCCCC-----HHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 596 -EAALDGPCP-----ENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 596 -d~~~~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
.+......+ ......+.+++.+||+.+|++|||+.|++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 238 SIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred cCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 000000000 012355778999999999999999999875
No 239
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.93 E-value=8.5e-26 Score=231.95 Aligned_cols=208 Identities=24% Similarity=0.304 Sum_probs=159.1
Q ss_pred HHhcCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc----------------------ceEEEEeEeecCC------
Q 040814 416 AATNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG----------------------RTIRLMGCSLHGA------ 466 (664)
Q Consensus 416 ~~t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~----------------------~~v~l~g~~~~~~------ 466 (664)
.++++|++.+.||+|++|.||+|..+ +++.+++|++.. +++++++++....
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD 82 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence 45789999999999999999999985 478999998742 3688899886544
Q ss_pred eeEEEEeccCCCchhHHhhccc-ccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc------------------
Q 040814 467 ERILVYEFMPNKSLDFFIFDSV-KKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------ 527 (664)
Q Consensus 467 ~~~lV~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------ 527 (664)
..++||||+++++|.+++.... ....+++..+..++.|++.||.|||+.+.+|.++++.|.
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~ 162 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQ 162 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCcccee
Confidence 4899999999999999985422 246799999999999999999999999999998887661
Q ss_pred --------ccccccCCccchhhhcc-----CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHh
Q 040814 528 --------NRVVGTYGYMAPEYAMN-----GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASEL 594 (664)
Q Consensus 528 --------~~~~Gt~~Y~APE~~~~-----~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (664)
....|+..|+|||++.. ..++.++|||||||++|||++|+.||........ .... .....
T Consensus 163 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~---~~~~-~~~~~--- 235 (275)
T cd06608 163 LDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRA---LFKI-PRNPP--- 235 (275)
T ss_pred cccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHH---HHHh-hccCC---
Confidence 12346778999999853 3478899999999999999999999864322111 1000 00000
Q ss_pred hhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 595 MEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 595 ~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
.....+......+.+++.+||+.||++|||+.|+++
T Consensus 236 ----~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 236 ----PTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred ----CCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 011112224456788899999999999999999986
No 240
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.93 E-value=1.4e-25 Score=233.43 Aligned_cols=203 Identities=22% Similarity=0.357 Sum_probs=157.9
Q ss_pred cCccccceeccCCCcCEEEEEEcC-CcEEEEEeccc----------------------ceEEEEeEeecCCeeEEEEecc
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG----------------------RTIRLMGCSLHGAERILVYEFM 475 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~----------------------~~v~l~g~~~~~~~~~lV~Ey~ 475 (664)
+.|++.++||+|+||.||+|+... ++.+|+|.+.. +++++++++..+...++||||+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 568888999999999999999855 89999998753 3689999999889999999999
Q ss_pred CCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------cc
Q 040814 476 PNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NR 529 (664)
Q Consensus 476 ~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~ 529 (664)
++++|..++.+ ....+++..+..++.|++.||.|||+.+.+|+|+++.|. ..
T Consensus 92 ~~~~l~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 169 (292)
T cd06644 92 PGGAVDAIMLE--LDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDS 169 (292)
T ss_pred CCCcHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceeccccccccce
Confidence 99999888743 235689999999999999999999999999999998871 11
Q ss_pred ccccCCccchhhhc-----cCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCC
Q 040814 530 VVGTYGYMAPEYAM-----NGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCP 604 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~-----~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 604 (664)
..++..|+|||++. ...++.++|||||||++|||++|+.||......... . ....... + ....+
T Consensus 170 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~--~--~~~~~~~-----~--~~~~~ 238 (292)
T cd06644 170 FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVL--L--KIAKSEP-----P--TLSQP 238 (292)
T ss_pred ecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHH--H--HHhcCCC-----c--cCCCC
Confidence 23677899999984 345788999999999999999999998643321100 0 0000000 0 00112
Q ss_pred HHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 605 ENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 605 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
......+.+++.+||+.+|++||+++++++
T Consensus 239 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 239 SKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred cccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 233345778889999999999999999975
No 241
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.93 E-value=8.9e-26 Score=233.93 Aligned_cols=207 Identities=21% Similarity=0.314 Sum_probs=159.7
Q ss_pred cCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-----------------------ceEEEEeEeecCCeeEEEEec
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-----------------------RTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV~Ey 474 (664)
++|++.+.||+|+||.||++... +++.||+|.+.. +++++++++...+..++||||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 46788899999999999999986 589999997742 257888888889999999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhh-cCccccccccccc------------------------cc
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK-YSRLRMNESKVNT------------------------NR 529 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~-~~~~h~d~~~~n~------------------------~~ 529 (664)
+++++|..++........+++..+..++.||+.||.|||+ .+++|.|+++.|. ..
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 160 (286)
T cd06622 81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKT 160 (286)
T ss_pred cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCcccc
Confidence 9999999998543223479999999999999999999996 5899999888761 11
Q ss_pred ccccCCccchhhhccC------CCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCC
Q 040814 530 VVGTYGYMAPEYAMNG------IVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPC 603 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~~~------~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 603 (664)
..++..|+|||.+.+. .++.++|||||||++|||++|+.||............ ..+.+ ......
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~---------~~~~~-~~~~~~ 230 (286)
T cd06622 161 NIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQL---------SAIVD-GDPPTL 230 (286)
T ss_pred CCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHH---------HHHhh-cCCCCC
Confidence 2467789999998543 3588999999999999999999998643221111100 01111 111223
Q ss_pred CHHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 604 PENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 604 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
+......+.+++.+||+.+|++||++++++..
T Consensus 231 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 231 PSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred CcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 44455667888899999999999999999863
No 242
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.93 E-value=1.5e-25 Score=228.10 Aligned_cols=200 Identities=25% Similarity=0.357 Sum_probs=158.0
Q ss_pred CccccceeccCCCcCEEEEEEc-CCcEEEEEeccc---------------------------ceEEEEeEeecCCeeEEE
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG---------------------------RTIRLMGCSLHGAERILV 471 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~---------------------------~~v~l~g~~~~~~~~~lV 471 (664)
+|+..+.||+|+||.||+|..+ +++.|++|.+.. +++++++++..+...++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 3667789999999999999986 689999997632 357899999999999999
Q ss_pred EeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc------------------------
Q 040814 472 YEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------------ 527 (664)
Q Consensus 472 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------------ 527 (664)
+||+++++|.+++. +...+++..+..++.||+.||.|||+.+++|.++++.|.
T Consensus 81 ~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~ 157 (258)
T cd06632 81 LELVPGGSLAKLLK---KYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSF 157 (258)
T ss_pred EEecCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceecccccc
Confidence 99999999999984 335689999999999999999999999999998888761
Q ss_pred -ccccccCCccchhhhccCC-CCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCH
Q 040814 528 -NRVVGTYGYMAPEYAMNGI-VSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPE 605 (664)
Q Consensus 528 -~~~~Gt~~Y~APE~~~~~~-~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 605 (664)
....|+..|+|||.+.... ++.++|+|||||++|||++|+.||....... .. +. ..........+.
T Consensus 158 ~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~---~~---~~------~~~~~~~~~~~~ 225 (258)
T cd06632 158 AKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVA---AV---FK------IGRSKELPPIPD 225 (258)
T ss_pred ccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHH---HH---HH------HHhcccCCCcCC
Confidence 1234678899999998766 8999999999999999999999986433111 11 00 000000112233
Q ss_pred HHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 606 NELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 606 ~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
.....+.+++.+||+.+|++||++.++++
T Consensus 226 ~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 226 HLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred CcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 33456778888999999999999999975
No 243
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.93 E-value=1.5e-25 Score=230.26 Aligned_cols=206 Identities=22% Similarity=0.292 Sum_probs=159.6
Q ss_pred cCccccceeccCCCcCEEEEEEcC----CcEEEEEeccc-----------------------ceEEEEeEeecCCeeEEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD----GQVIAVKRLSG-----------------------RTIRLMGCSLHGAERILV 471 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~----~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV 471 (664)
++|.+.+.||+|+||.||+|...+ ...||||.... +++++++++.. +..++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 457788999999999999998643 24689997752 36888888765 567899
Q ss_pred EeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc-----------------------
Q 040814 472 YEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN----------------------- 528 (664)
Q Consensus 472 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~----------------------- 528 (664)
|||+++|+|.+++... ...+++..+..++.|++.||.|||+.+.+|.|+++.|.-
T Consensus 85 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~ 162 (270)
T cd05056 85 MELAPLGELRSYLQVN--KYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESY 162 (270)
T ss_pred EEcCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecccccc
Confidence 9999999999999532 346899999999999999999999999999999988710
Q ss_pred ----cccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCC
Q 040814 529 ----RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPC 603 (664)
Q Consensus 529 ----~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 603 (664)
...++..|+|||.+....++.++|||||||++|||++ |+.||......+.. .. ...+. ....
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~---~~-~~~~~---------~~~~ 229 (270)
T cd05056 163 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVI---GR-IENGE---------RLPM 229 (270)
T ss_pred eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHH---HH-HHcCC---------cCCC
Confidence 0112357999999988889999999999999999996 99998654322111 11 11110 1112
Q ss_pred CHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhccc
Q 040814 604 PENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNN 640 (664)
Q Consensus 604 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 640 (664)
+......+.+++.+||..+|++|||+.++++.|+++.
T Consensus 230 ~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~ 266 (270)
T cd05056 230 PPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDIL 266 (270)
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 2334456888889999999999999999999998865
No 244
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.93 E-value=3.4e-25 Score=225.48 Aligned_cols=202 Identities=20% Similarity=0.264 Sum_probs=160.8
Q ss_pred CccccceeccCCCcCEEEEEEc-CCcEEEEEecc------------------------cceEEEEeEeecCCeeEEEEec
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLS------------------------GRTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~------------------------~~~v~l~g~~~~~~~~~lV~Ey 474 (664)
+|+..+.||+|+||.||.++.. +++.+++|++. ++++++++++.+++..+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 5788899999999999999864 48899999754 2379999999999999999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc--------------------------cc
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN--------------------------TN 528 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n--------------------------~~ 528 (664)
+++++|.+++... ....+++..+..++.|+++||.|||+.+.+|.|+++.| ..
T Consensus 81 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (256)
T cd08221 81 ANGGTLYDKIVRQ-KGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAE 159 (256)
T ss_pred cCCCcHHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEccccccccc
Confidence 9999999998543 24568999999999999999999999999999988876 01
Q ss_pred cccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHH
Q 040814 529 RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENEL 608 (664)
Q Consensus 529 ~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 608 (664)
...|++.|+|||.+.+..++.++||||||+++|||++|+.||......+ .... ...+. . ...+....
T Consensus 160 ~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~---~~~~-~~~~~--------~-~~~~~~~~ 226 (256)
T cd08221 160 TVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLN---LVVK-IVQGN--------Y-TPVVSVYS 226 (256)
T ss_pred ccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHH---HHHH-HHcCC--------C-CCCccccC
Confidence 2457889999999998889999999999999999999999985432111 1100 00110 0 11122334
Q ss_pred HHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 609 LRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 609 ~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
..+.+++.+||+.+|++||++.++++.
T Consensus 227 ~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 227 SELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred HHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 567788889999999999999999875
No 245
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.93 E-value=1.7e-25 Score=240.06 Aligned_cols=213 Identities=19% Similarity=0.145 Sum_probs=155.6
Q ss_pred HhcCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc------------------------ceEEEEeEeecCC-----
Q 040814 417 ATNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG------------------------RTIRLMGCSLHGA----- 466 (664)
Q Consensus 417 ~t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~------------------------~~v~l~g~~~~~~----- 466 (664)
..++|+..+.||+|+||.||++... +++.||||++.. +++++++++....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 3578999999999999999999874 489999998842 3688888876442
Q ss_pred -eeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc------------------
Q 040814 467 -ERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------ 527 (664)
Q Consensus 467 -~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------ 527 (664)
..++||||+++ +|...+. ..+++..+..++.||+.||.|||+.+++|+|+++.|.
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~ 172 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIH-----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 172 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHh-----ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccc
Confidence 47999999976 5655552 3588999999999999999999999999999998871
Q ss_pred -------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCC----------
Q 040814 528 -------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGK---------- 590 (664)
Q Consensus 528 -------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~---------- 590 (664)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...+.......+........
T Consensus 173 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (359)
T cd07876 173 ACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPT 252 (359)
T ss_pred cccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 123578899999999999999999999999999999999999975432211110000000000
Q ss_pred hhHhhhhh--hC-------------C---CCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 591 ASELMEAA--LD-------------G---PCPENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 591 ~~~~~d~~--~~-------------~---~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
........ .. . .........+.+++.+||+.||++|||+.|+++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 253 VRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00000000 00 0 0011123457788899999999999999999864
No 246
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.93 E-value=9.2e-26 Score=259.86 Aligned_cols=207 Identities=20% Similarity=0.259 Sum_probs=158.0
Q ss_pred HHHhcCccccceeccCCCcCEEEEEEcC-CcEEEEEecc------------------------cceEEEEeEeec--CCe
Q 040814 415 AAATNNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLS------------------------GRTIRLMGCSLH--GAE 467 (664)
Q Consensus 415 ~~~t~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~------------------------~~~v~l~g~~~~--~~~ 467 (664)
....++|.+.+.||+|+||.||++.... ++.||+|.+. +++|++++++.+ ...
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ 88 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK 88 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence 3345789999999999999999999855 7889999874 236899998754 356
Q ss_pred eEEEEeccCCCchhHHhhccc-ccCCCCHHHHHHHHHHHHHHHHHhhhcC-------cccccccccccc-----------
Q 040814 468 RILVYEFMPNKSLDFFIFDSV-KKKQLNWSKRITIIEGIAQGLIYLHKYS-------RLRMNESKVNTN----------- 528 (664)
Q Consensus 468 ~~lV~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~I~~~ia~gL~yLH~~~-------~~h~d~~~~n~~----------- 528 (664)
.+|||||+++|+|..+|.... ....+++..++.|+.||+.||.|||+.+ ++|+|++|.|.-
T Consensus 89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i 168 (1021)
T PTZ00266 89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI 168 (1021)
T ss_pred EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence 899999999999999996432 2357999999999999999999999854 899999887721
Q ss_pred -------------------------------cccccCCccchhhhcc--CCCCccchHHHHHHHHHHHHhCCCCCCCCCC
Q 040814 529 -------------------------------RVVGTYGYMAPEYAMN--GIVSMKADVFSFGVLLLEIVSGRKNNNCYDE 575 (664)
Q Consensus 529 -------------------------------~~~Gt~~Y~APE~~~~--~~~s~ksDVySfGvvL~ElltG~~p~~~~~~ 575 (664)
...||+.|+|||++.+ ..++.++||||||||||||++|+.||.....
T Consensus 169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~ 248 (1021)
T PTZ00266 169 TAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN 248 (1021)
T ss_pred cccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc
Confidence 1257899999999864 4589999999999999999999999864322
Q ss_pred CCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 576 ERPLNLVGYLWKEGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
.. .++. ..... ...+ .......+.+++..||+.+|.+||++.|++.
T Consensus 249 ~~--qli~-~lk~~---------p~lp-i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 249 FS--QLIS-ELKRG---------PDLP-IKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred HH--HHHH-HHhcC---------CCCC-cCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 11 1110 00000 0000 0112355778888899999999999999983
No 247
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.93 E-value=8e-26 Score=239.89 Aligned_cols=153 Identities=21% Similarity=0.255 Sum_probs=132.9
Q ss_pred cCccccceeccCCCcCEEEEEEcC-CcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVY 472 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~ 472 (664)
++|++.++||+|+||.||+++.+. ++.+|+|++.+ +++++++++..++..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 478889999999999999999865 78899998742 2578889999999999999
Q ss_pred eccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-------------------------
Q 040814 473 EFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------------- 527 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------------- 527 (664)
||+++|+|.+++.. ....+++..+..++.||+.||.|||+.+++|+|+++.|.
T Consensus 81 ey~~~g~L~~~l~~--~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~ 158 (332)
T cd05623 81 DYYVGGDLLTLLSK--FEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV 158 (332)
T ss_pred eccCCCcHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCcc
Confidence 99999999999953 235789999999999999999999999999999998771
Q ss_pred --ccccccCCccchhhhc-----cCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 040814 528 --NRVVGTYGYMAPEYAM-----NGIVSMKADVFSFGVLLLEIVSGRKNNNCY 573 (664)
Q Consensus 528 --~~~~Gt~~Y~APE~~~-----~~~~s~ksDVySfGvvL~ElltG~~p~~~~ 573 (664)
....||+.|||||++. ...++.++|||||||++|||++|+.||...
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~ 211 (332)
T cd05623 159 QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAE 211 (332)
T ss_pred eecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCC
Confidence 1235899999999986 346899999999999999999999998643
No 248
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.93 E-value=1.8e-25 Score=242.66 Aligned_cols=214 Identities=17% Similarity=0.175 Sum_probs=161.0
Q ss_pred hcCccccceeccCCCcCEEEEEEc---CCcEEEEEeccc-----------------ceEEEEeEeecCCeeEEEEeccCC
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLL---DGQVIAVKRLSG-----------------RTIRLMGCSLHGAERILVYEFMPN 477 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~---~~~~vavK~~~~-----------------~~v~l~g~~~~~~~~~lV~Ey~~~ 477 (664)
..+|.+.+.||+|+||.||++... .++.||+|.+.. +++++++++......++||||+.
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~- 169 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGKTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYK- 169 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcC-
Confidence 457999999999999999999753 367899998743 47899999999999999999996
Q ss_pred CchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc----------------------------cc
Q 040814 478 KSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT----------------------------NR 529 (664)
Q Consensus 478 gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~----------------------------~~ 529 (664)
++|..++ .....+++..++.|+.||+.||.|||+.+++|+|+++.|. ..
T Consensus 170 ~~l~~~l---~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~ 246 (392)
T PHA03207 170 CDLFTYV---DRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYG 246 (392)
T ss_pred CCHHHHH---HhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcccccccccc
Confidence 6888888 2456799999999999999999999999999999998771 12
Q ss_pred ccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHh----------cCChhHhh----
Q 040814 530 VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWK----------EGKASELM---- 595 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~----------~~~~~~~~---- 595 (664)
..||+.|+|||++.+..++.++|||||||++|||++|+.||...........+..... ......+.
T Consensus 247 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~ 326 (392)
T PHA03207 247 WSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFK 326 (392)
T ss_pred cccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHH
Confidence 3589999999999999999999999999999999999999865443221111111000 00000000
Q ss_pred --hhhhCCCCCH-------HHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 596 --EAALDGPCPE-------NELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 596 --d~~~~~~~~~-------~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
.......... .....+.+++.+||+.||++|||+.|++..
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 327 QYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred hhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000111110 112356677889999999999999999875
No 249
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.93 E-value=2.3e-25 Score=229.89 Aligned_cols=198 Identities=24% Similarity=0.338 Sum_probs=158.0
Q ss_pred ccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-----------------------ceEEEEeEeecCCeeEEEEeccC
Q 040814 421 FSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-----------------------RTIRLMGCSLHGAERILVYEFMP 476 (664)
Q Consensus 421 ~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV~Ey~~ 476 (664)
|+..+.||+|+||.||+|... +++.||+|.+.. +++++++++..+...++||||++
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 85 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence 566789999999999999874 588999998642 36899999999999999999999
Q ss_pred CCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------ccc
Q 040814 477 NKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NRV 530 (664)
Q Consensus 477 ~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~~ 530 (664)
+++|..++. ...+++..+..++.|++.||.|||+.+.+|.|+++.|. ...
T Consensus 86 ~~~l~~~i~----~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~ 161 (277)
T cd06641 86 GGSALDLLE----PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF 161 (277)
T ss_pred CCcHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchhhhccc
Confidence 999999983 35689999999999999999999999999998887761 112
Q ss_pred cccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHH
Q 040814 531 VGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLR 610 (664)
Q Consensus 531 ~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 610 (664)
.++..|+|||.+.+..++.++|||||||++|||++|+.|+......... ..+........+......
T Consensus 162 ~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~ 228 (277)
T cd06641 162 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVL-------------FLIPKNNPPTLEGNYSKP 228 (277)
T ss_pred cCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHH-------------HHHhcCCCCCCCcccCHH
Confidence 4677899999999888999999999999999999999998643221110 001011111122233455
Q ss_pred HHHHHHhcccccCCCCCCHHHHHHH
Q 040814 611 CIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 611 l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
+.+++.+||+.+|++||++.++++.
T Consensus 229 ~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 229 LKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred HHHHHHHHccCChhhCcCHHHHHhC
Confidence 7788889999999999999999984
No 250
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.93 E-value=2.4e-26 Score=243.65 Aligned_cols=191 Identities=23% Similarity=0.263 Sum_probs=147.8
Q ss_pred eccCCCcCEEEEEEcC-CcEEEEEeccc----------------------------ceEEEEeEeecCCeeEEEEeccCC
Q 040814 427 LGEGGFGPVYKGKLLD-GQVIAVKRLSG----------------------------RTIRLMGCSLHGAERILVYEFMPN 477 (664)
Q Consensus 427 lg~G~fg~Vy~~~~~~-~~~vavK~~~~----------------------------~~v~l~g~~~~~~~~~lV~Ey~~~ 477 (664)
||+|+||.||+|+... ++.||||++.+ ++++++..+.+.+..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 7999999999999754 89999998742 246777888888999999999999
Q ss_pred CchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------cccc
Q 040814 478 KSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NRVV 531 (664)
Q Consensus 478 gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~~~ 531 (664)
|+|..++. +...+++..+..++.||++||+|||+.+++|+|+++.|. ....
T Consensus 81 g~L~~~l~---~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 157 (330)
T cd05586 81 GELFWHLQ---KEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFC 157 (330)
T ss_pred ChHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCcc
Confidence 99999884 346799999999999999999999999999999988771 1245
Q ss_pred ccCCccchhhhccC-CCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCH-HHHH
Q 040814 532 GTYGYMAPEYAMNG-IVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPE-NELL 609 (664)
Q Consensus 532 Gt~~Y~APE~~~~~-~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~ 609 (664)
||+.|||||++.+. .++.++|||||||++|||++|+.||......+. .... ..+. ...+. ....
T Consensus 158 gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~---~~~i-~~~~----------~~~~~~~~~~ 223 (330)
T cd05586 158 GTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQM---YRNI-AFGK----------VRFPKNVLSD 223 (330)
T ss_pred CCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHH---HHHH-HcCC----------CCCCCccCCH
Confidence 88999999999764 489999999999999999999999864322111 1000 0000 01111 1234
Q ss_pred HHHHHHHhcccccCCCCCC----HHHHHH
Q 040814 610 RCIHAGLLCVHDQAVNRPT----MADVVS 634 (664)
Q Consensus 610 ~l~~l~~~Cl~~dP~~RPt----~~evl~ 634 (664)
.+.+++.+||+.||.+||+ +.++++
T Consensus 224 ~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 224 EGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred HHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 5667788899999999984 555544
No 251
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.93 E-value=1.8e-25 Score=229.88 Aligned_cols=204 Identities=21% Similarity=0.283 Sum_probs=156.1
Q ss_pred CccccceeccCCCcCEEEEEEc-CCcEEEEEecc--------------------------------cceEEEEeEeecCC
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLS--------------------------------GRTIRLMGCSLHGA 466 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~--------------------------------~~~v~l~g~~~~~~ 466 (664)
+|...+.||+|+||.||+|... +++.||+|.++ ++++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4667889999999999999864 58999999763 12578999999999
Q ss_pred eeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-------------------
Q 040814 467 ERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------- 527 (664)
Q Consensus 467 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------- 527 (664)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||+.+.+|.|+++.|.
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~ 158 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRT---YGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKS 158 (272)
T ss_pred ceEEEEecCCCCcHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeeccccccc
Confidence 99999999999999999843 36799999999999999999999999999999888761
Q ss_pred ---------ccccccCCccchhhhccCC--CCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhh
Q 040814 528 ---------NRVVGTYGYMAPEYAMNGI--VSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELME 596 (664)
Q Consensus 528 ---------~~~~Gt~~Y~APE~~~~~~--~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d 596 (664)
....|+..|+|||.+.... ++.++||||||+++||+++|..|+........ ..........
T Consensus 159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~---~~~~~~~~~~----- 230 (272)
T cd06629 159 DDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAA---MFKLGNKRSA----- 230 (272)
T ss_pred cccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHH---HHHhhccccC-----
Confidence 1124677899999987654 89999999999999999999999853221110 0000000000
Q ss_pred hhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 597 AALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 597 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
..............+.+++.+||+.+|++|||+++|++
T Consensus 231 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 231 PPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred CcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 00011111123456778888999999999999999886
No 252
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.93 E-value=2.4e-25 Score=229.53 Aligned_cols=199 Identities=21% Similarity=0.333 Sum_probs=155.8
Q ss_pred CccccceeccCCCcCEEEEEE-cCCcEEEEEecc--------------------------cceEEEEeEeecCCeeEEEE
Q 040814 420 NFSTTNKLGEGGFGPVYKGKL-LDGQVIAVKRLS--------------------------GRTIRLMGCSLHGAERILVY 472 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~--------------------------~~~v~l~g~~~~~~~~~lV~ 472 (664)
.|+..+.||+|+||.||+|.. .+++.||+|.+. ++++++++++..+...++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 477789999999999999997 458999999763 23678999999999999999
Q ss_pred eccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc--------------------------
Q 040814 473 EFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN-------------------------- 526 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n-------------------------- 526 (664)
||+++++|.+++. ...+++.....++.|++.||.|||+.+++|.++++.|
T Consensus 82 e~~~~~~L~~~~~----~~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~ 157 (277)
T cd06917 82 EYAEGGSVRTLMK----AGPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSK 157 (277)
T ss_pred ecCCCCcHHHHHH----ccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCccc
Confidence 9999999999883 2479999999999999999999999999999888776
Q ss_pred cccccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCH
Q 040814 527 TNRVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPE 605 (664)
Q Consensus 527 ~~~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 605 (664)
.....|+..|+|||.+.+ ..++.++|||||||++|||++|+.||........... .... .....+.
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~----~~~~---------~~~~~~~ 224 (277)
T cd06917 158 RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMML----IPKS---------KPPRLED 224 (277)
T ss_pred cccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhc----cccC---------CCCCCCc
Confidence 112347778999999875 4578999999999999999999999864322111100 0000 0011111
Q ss_pred -HHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 606 -NELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 606 -~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
.....+.+++.+||+.||++||++.++++.
T Consensus 225 ~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 225 NGYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred ccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 134567788889999999999999999863
No 253
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.93 E-value=6.3e-25 Score=227.90 Aligned_cols=212 Identities=25% Similarity=0.299 Sum_probs=160.1
Q ss_pred cCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-----------------------ceEEEEeEeecC--CeeEEEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-----------------------RTIRLMGCSLHG--AERILVY 472 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-----------------------~~v~l~g~~~~~--~~~~lV~ 472 (664)
++|...+.||.|++|.||++... +++.+|+|.+.. +++++++++... ...++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 46888899999999999999985 489999998752 368899988653 4689999
Q ss_pred eccCCCchhHHhhccc-ccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc------------------------
Q 040814 473 EFMPNKSLDFFIFDSV-KKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------------ 527 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------------ 527 (664)
||+++++|.+++.... ....+++.....|+.||+.||.|||+.+.+|.++++.|.
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 160 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLA 160 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeecccccccccccc
Confidence 9999999999875322 245689999999999999999999999999998887661
Q ss_pred ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCC--CCchhhhhhHHhcCChhHhhhhhhCCCCCH
Q 040814 528 NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDE--ERPLNLVGYLWKEGKASELMEAALDGPCPE 605 (664)
Q Consensus 528 ~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 605 (664)
....++..|+|||.+.+..++.++|||||||++|||++|+.||..... ........+... .....+.+. .....
T Consensus 161 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~ 236 (287)
T cd06621 161 GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVN-MPNPELKDE---PGNGI 236 (287)
T ss_pred ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhc-CCchhhccC---CCCCC
Confidence 123467789999999989999999999999999999999999875422 111112211111 011111000 00001
Q ss_pred HHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 606 NELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 606 ~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
.....+.+++.+||+.+|++|||+.||++
T Consensus 237 ~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 237 KWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred chHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 23456789999999999999999999987
No 254
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.93 E-value=1.3e-25 Score=240.53 Aligned_cols=213 Identities=18% Similarity=0.146 Sum_probs=156.0
Q ss_pred HhcCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc------------------------ceEEEEeEeecC------
Q 040814 417 ATNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG------------------------RTIRLMGCSLHG------ 465 (664)
Q Consensus 417 ~t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~------------------------~~v~l~g~~~~~------ 465 (664)
..++|+..+.||+|+||.||++... .++.||||++.. +++++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4578999999999999999999874 488999998852 357888877543
Q ss_pred CeeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc------------------
Q 040814 466 AERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------ 527 (664)
Q Consensus 466 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------ 527 (664)
...++||||+++ +|..++. ..+++..+..++.||++||.|||+.+++|+|+++.|.
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~ 168 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 168 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHh-----hcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCccccc
Confidence 347899999975 5666662 3588999999999999999999999999999998871
Q ss_pred -------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcC----------C
Q 040814 528 -------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEG----------K 590 (664)
Q Consensus 528 -------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~----------~ 590 (664)
....||..|+|||++.+..++.++|||||||++|||++|+.||...+..+............ .
T Consensus 169 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (355)
T cd07874 169 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 248 (355)
T ss_pred CCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHH
Confidence 12357889999999999999999999999999999999999996543221111000000000 0
Q ss_pred hhHhhhh---------------h-h--CCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 591 ASELMEA---------------A-L--DGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 591 ~~~~~d~---------------~-~--~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
.....+. . . ....+......+.+++.+|++.||++|||+.|+++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 249 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 0000000 0 0 000111123467889999999999999999999874
No 255
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.93 E-value=2.4e-25 Score=227.20 Aligned_cols=206 Identities=20% Similarity=0.277 Sum_probs=161.1
Q ss_pred hcCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc----------------------ceEEEEeEeecCCeeEEEEec
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG----------------------RTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~----------------------~~v~l~g~~~~~~~~~lV~Ey 474 (664)
.++|+..+.||+|+||.||+|... +++.+|+|.+.. +++++++++..+...+++|||
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY 81 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence 367889999999999999999975 478899998742 368999999999999999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------c
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------N 528 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~ 528 (664)
+++++|.+++.. ....+++..+..++.|++.||.|||+.+++|.|+++.|. .
T Consensus 82 ~~~~~l~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~ 159 (262)
T cd06613 82 CGGGSLQDIYQV--TRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRK 159 (262)
T ss_pred CCCCcHHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhhccc
Confidence 999999998843 235799999999999999999999999999999888760 1
Q ss_pred cccccCCccchhhhccC---CCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCH
Q 040814 529 RVVGTYGYMAPEYAMNG---IVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPE 605 (664)
Q Consensus 529 ~~~Gt~~Y~APE~~~~~---~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 605 (664)
...++..|+|||.+.+. .++.++|||||||++|||++|+.|+........... ..... ..... .....
T Consensus 160 ~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~----~~~~~---~~~~~--~~~~~ 230 (262)
T cd06613 160 SFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFL----ISKSN---FPPPK--LKDKE 230 (262)
T ss_pred cccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH----HHhcc---CCCcc--ccchh
Confidence 12467789999999876 889999999999999999999999864332211100 00000 00000 01122
Q ss_pred HHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 606 NELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 606 ~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
.....+.+++.+||+.+|.+|||+++|+.
T Consensus 231 ~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 231 KWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred hhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 34456888999999999999999999875
No 256
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.93 E-value=1.6e-25 Score=229.87 Aligned_cols=204 Identities=20% Similarity=0.273 Sum_probs=148.1
Q ss_pred ceeccCCCcCEEEEEEcC---CcEEEEEecc-----------------------cceEEEEeEeecCCeeEEEEeccCCC
Q 040814 425 NKLGEGGFGPVYKGKLLD---GQVIAVKRLS-----------------------GRTIRLMGCSLHGAERILVYEFMPNK 478 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~~---~~~vavK~~~-----------------------~~~v~l~g~~~~~~~~~lV~Ey~~~g 478 (664)
+.||+|+||.||+|...+ ...+|+|.+. ++++++++.+.+....++||||+++|
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 369999999999997543 4578899763 23689999999999999999999999
Q ss_pred chhHHhhcccc--cCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc----------------------------c
Q 040814 479 SLDFFIFDSVK--KKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT----------------------------N 528 (664)
Q Consensus 479 sL~~~l~~~~~--~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~----------------------------~ 528 (664)
+|.+++..... ....++.....++.||+.||+|||+.+++|+|+++.|. .
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~ 160 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKD 160 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchheeccC
Confidence 99999965322 23457888899999999999999999999999998871 0
Q ss_pred cccccCCccchhhhcc-------CCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhC
Q 040814 529 RVVGTYGYMAPEYAMN-------GIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALD 600 (664)
Q Consensus 529 ~~~Gt~~Y~APE~~~~-------~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 600 (664)
...++..|+|||++.. ..++.++|||||||++|||++ |..||......+ .......+. ...+..+
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~---~~~~~~~~~-~~~~~~~--- 233 (269)
T cd05042 161 CHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ---VLKQVVREQ-DIKLPKP--- 233 (269)
T ss_pred CCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH---HHHHHhhcc-CccCCCC---
Confidence 0123456999999743 457889999999999999999 777875432211 111111111 1111111
Q ss_pred CCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHh
Q 040814 601 GPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLR 637 (664)
Q Consensus 601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~ 637 (664)
..+......+.+++..|| .||++|||+++|+++|.
T Consensus 234 -~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 234 -QLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred -cccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 112223344556677788 49999999999999874
No 257
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.93 E-value=2.1e-25 Score=245.01 Aligned_cols=151 Identities=18% Similarity=0.218 Sum_probs=131.7
Q ss_pred hcCccccceeccCCCcCEEEEEEcC-CcEEEEEec----------------ccceEEEEeEeecCCeeEEEEeccCCCch
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRL----------------SGRTIRLMGCSLHGAERILVYEFMPNKSL 480 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~----------------~~~~v~l~g~~~~~~~~~lV~Ey~~~gsL 480 (664)
..+|.+.+.||+|+||.||++.... ++.||||.. ++++|++++++..+...++||||+. ++|
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~-~~L 246 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWYASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR-SDL 246 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-CCH
Confidence 4579999999999999999999865 889999964 3468999999999999999999995 688
Q ss_pred hHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc----------------------------ccccc
Q 040814 481 DFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT----------------------------NRVVG 532 (664)
Q Consensus 481 ~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~----------------------------~~~~G 532 (664)
..++.. ....++|..++.|+.||++||.|||+.+++|+|+++.|. ....|
T Consensus 247 ~~~l~~--~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~G 324 (461)
T PHA03211 247 YTYLGA--RLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAG 324 (461)
T ss_pred HHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccccccccCC
Confidence 888743 234799999999999999999999999999999998871 12358
Q ss_pred cCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCC
Q 040814 533 TYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNN 571 (664)
Q Consensus 533 t~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~ 571 (664)
|..|||||++.+..++.++|||||||+||||++|..|+.
T Consensus 325 T~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf 363 (461)
T PHA03211 325 TVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLF 363 (461)
T ss_pred CcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcc
Confidence 999999999999999999999999999999999887654
No 258
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.93 E-value=2.6e-25 Score=228.03 Aligned_cols=200 Identities=23% Similarity=0.326 Sum_probs=151.5
Q ss_pred cCccccceeccCCCcCEEEEEEc-CCcEEEEEecc---------------------------cceEEEEeEeec--CCee
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLS---------------------------GRTIRLMGCSLH--GAER 468 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~---------------------------~~~v~l~g~~~~--~~~~ 468 (664)
.+|+..+.||+|+||.||+|... +++.||+|++. ++++++++++.+ +...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 47888999999999999999975 48999999763 136788888765 3567
Q ss_pred EEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc---------------------
Q 040814 469 ILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------- 527 (664)
Q Consensus 469 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------- 527 (664)
++++||+++++|.+++. +...+++..+..++.|++.||.|||+.+++|.++++.|.
T Consensus 82 ~l~~e~~~~~~L~~~l~---~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd06651 82 TIFMEYMPGGSVKDQLK---AYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQT 158 (266)
T ss_pred EEEEeCCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcccccc
Confidence 89999999999999984 335689999999999999999999999999998777650
Q ss_pred --------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhh
Q 040814 528 --------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAAL 599 (664)
Q Consensus 528 --------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 599 (664)
....++..|+|||++.+..++.++|||||||++|||++|+.||....... .+.. ......
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~---~~~~---------~~~~~~ 226 (266)
T cd06651 159 ICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMA---AIFK---------IATQPT 226 (266)
T ss_pred ccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHH---HHHH---------HhcCCC
Confidence 01246778999999998889999999999999999999999986432111 1100 000001
Q ss_pred CCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 600 DGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
....+......+..+ +.||..+|++||+|+||++
T Consensus 227 ~~~~~~~~~~~~~~l-i~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 227 NPQLPSHISEHARDF-LGCIFVEARHRPSAEELLR 260 (266)
T ss_pred CCCCchhcCHHHHHH-HHHhcCChhhCcCHHHHhc
Confidence 112222222333333 3688899999999999975
No 259
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.93 E-value=1.8e-25 Score=234.22 Aligned_cols=205 Identities=17% Similarity=0.218 Sum_probs=160.9
Q ss_pred cCccccceeccCCCcCEEEEEEcC-CcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVY 472 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~ 472 (664)
++|+..+.||+|+||.||++.... ++.||+|.+.+ +++++++.+..++..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 478889999999999999999754 78999998742 2688999999999999999
Q ss_pred eccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc---------------c---------
Q 040814 473 EFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT---------------N--------- 528 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~---------------~--------- 528 (664)
||+++++|.+++. ....+++..+..++.|++.||.|||+.+.+|+|+++.|. .
T Consensus 81 e~~~g~~L~~~l~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~ 157 (305)
T cd05609 81 EYVEGGDCATLLK---NIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTT 157 (305)
T ss_pred ecCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccc
Confidence 9999999999994 345789999999999999999999999999999888771 0
Q ss_pred -----------------cccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCCh
Q 040814 529 -----------------RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKA 591 (664)
Q Consensus 529 -----------------~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 591 (664)
...++..|+|||.+.+..++.++|||||||++|||++|+.||......+ ....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~---~~~~------- 227 (305)
T cd05609 158 NLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE---LFGQ------- 227 (305)
T ss_pred cccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHH-------
Confidence 1235678999999998889999999999999999999999986432111 1100
Q ss_pred hHhhhhhhCC-CCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhc
Q 040814 592 SELMEAALDG-PCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQ 638 (664)
Q Consensus 592 ~~~~d~~~~~-~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 638 (664)
........ .........+.+++.+||+.+|++||++.++.++|+.
T Consensus 228 --~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 228 --VISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred --HHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 00000000 0011233456788889999999999998777777765
No 260
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.93 E-value=6.5e-26 Score=233.26 Aligned_cols=202 Identities=20% Similarity=0.255 Sum_probs=162.6
Q ss_pred HHHhcCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc------------------------------------ceEE
Q 040814 415 AAATNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG------------------------------------RTIR 457 (664)
Q Consensus 415 ~~~t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~------------------------------------~~v~ 457 (664)
.+..++|++.+.||+|.||.|-+|+.. +++.||||++++ ++|+
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~ 172 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK 172 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence 345678999999999999999999974 599999999864 2589
Q ss_pred EEeEeecC--CeeEEEEeccCCCchhHHhhcccccCC-CCHHHHHHHHHHHHHHHHHhhhcCcccccccccc--------
Q 040814 458 LMGCSLHG--AERILVYEFMPNKSLDFFIFDSVKKKQ-LNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN-------- 526 (664)
Q Consensus 458 l~g~~~~~--~~~~lV~Ey~~~gsL~~~l~~~~~~~~-l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n-------- 526 (664)
|+.+..+. +..|||+|||..|.+...= ..+. |++.+++++++++..||+|||.++++|+|++|.|
T Consensus 173 LiEvLDDP~s~~~YlVley~s~G~v~w~p----~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~ 248 (576)
T KOG0585|consen 173 LIEVLDDPESDKLYLVLEYCSKGEVKWCP----PDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGT 248 (576)
T ss_pred EEEeecCcccCceEEEEEeccCCccccCC----CCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCc
Confidence 99988764 6789999999999875322 2334 9999999999999999999999999999999988
Q ss_pred -----------------------cccccccCCccchhhhccCC----CCccchHHHHHHHHHHHHhCCCCCCCCCCCCch
Q 040814 527 -----------------------TNRVVGTYGYMAPEYAMNGI----VSMKADVFSFGVLLLEIVSGRKNNNCYDEERPL 579 (664)
Q Consensus 527 -----------------------~~~~~Gt~~Y~APE~~~~~~----~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~ 579 (664)
....+||+.|||||.+.++. .+.+.||||+||+||.|+.|+.||....
T Consensus 249 VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~----- 323 (576)
T KOG0585|consen 249 VKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDF----- 323 (576)
T ss_pred EEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccch-----
Confidence 12357999999999997633 3578899999999999999999986432
Q ss_pred hhhhhHHhcCChhHhhhhhhC----CCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHH
Q 040814 580 NLVGYLWKEGKASELMEAALD----GPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCL 636 (664)
Q Consensus 580 ~~~~~~~~~~~~~~~~d~~~~----~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L 636 (664)
..++.+++.. .+...+..+++.+++++.|++||+.|.+..+|....
T Consensus 324 -----------~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hp 373 (576)
T KOG0585|consen 324 -----------ELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHP 373 (576)
T ss_pred -----------HHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecc
Confidence 1233344333 333345677788899999999999999999987553
No 261
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.93 E-value=1.8e-25 Score=231.59 Aligned_cols=213 Identities=19% Similarity=0.261 Sum_probs=158.5
Q ss_pred cCccccceeccCCCcCEEEEEEcC-CcEEEEEeccc------------------------ceEEEEeEeecCCeeEEEEe
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG------------------------RTIRLMGCSLHGAERILVYE 473 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~------------------------~~v~l~g~~~~~~~~~lV~E 473 (664)
++|+..+.||+|+||.||+|..++ ++.||+|+++. +++++++++..++..++|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 468889999999999999999864 88999997742 36888999999999999999
Q ss_pred ccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------
Q 040814 474 FMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-------------------------- 527 (664)
Q Consensus 474 y~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-------------------------- 527 (664)
|++++.+..++. +...+++..+..++.||+.||.|||+.+.+|+++++.|.
T Consensus 81 ~~~~~~l~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~ 157 (288)
T cd07833 81 YVERTLLELLEA---SPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASP 157 (288)
T ss_pred cCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcccc
Confidence 999988876652 345689999999999999999999999999998887651
Q ss_pred -ccccccCCccchhhhccC-CCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhc------------CCh--
Q 040814 528 -NRVVGTYGYMAPEYAMNG-IVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKE------------GKA-- 591 (664)
Q Consensus 528 -~~~~Gt~~Y~APE~~~~~-~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~------------~~~-- 591 (664)
....++..|+|||++.+. .++.++||||||+++|||++|+.||......+........+.. ...
T Consensus 158 ~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T cd07833 158 LTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAG 237 (288)
T ss_pred ccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccc
Confidence 123456789999999887 8899999999999999999999998644322111111000000 000
Q ss_pred ---hHhhhh-hhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 592 ---SELMEA-ALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 592 ---~~~~d~-~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
.+..+. .....++......+.+++.+||+.+|++|||++++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 238 VAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred cccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 000000 0000112223566888999999999999999999875
No 262
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.93 E-value=3.2e-25 Score=229.12 Aligned_cols=196 Identities=20% Similarity=0.244 Sum_probs=152.9
Q ss_pred eeccCCCcCEEEEEEc-CCcEEEEEeccc----------------------------ceEEEEeEeecCCeeEEEEeccC
Q 040814 426 KLGEGGFGPVYKGKLL-DGQVIAVKRLSG----------------------------RTIRLMGCSLHGAERILVYEFMP 476 (664)
Q Consensus 426 ~lg~G~fg~Vy~~~~~-~~~~vavK~~~~----------------------------~~v~l~g~~~~~~~~~lV~Ey~~ 476 (664)
.||+|+||.||++... +++.||+|.+.+ +++++.+++..++..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999874 488999997742 24677888888889999999999
Q ss_pred CCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc------------------------ccccc
Q 040814 477 NKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------------NRVVG 532 (664)
Q Consensus 477 ~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------------~~~~G 532 (664)
+|+|..++. +...+++..+..++.|+++||.|||+.+++|+|+++.|. ....|
T Consensus 81 g~~L~~~l~---~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 157 (278)
T cd05606 81 GGDLHYHLS---QHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG 157 (278)
T ss_pred CCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCC
Confidence 999999884 345799999999999999999999999999999888761 12357
Q ss_pred cCCccchhhhccC-CCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHH
Q 040814 533 TYGYMAPEYAMNG-IVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRC 611 (664)
Q Consensus 533 t~~Y~APE~~~~~-~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l 611 (664)
+..|+|||.+.++ .++.++|||||||++|||++|+.||........... . . .........+......+
T Consensus 158 ~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~-~---------~-~~~~~~~~~~~~~s~~~ 226 (278)
T cd05606 158 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI-D---------R-MTLTMAVELPDSFSPEL 226 (278)
T ss_pred CcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHH-H---------H-HhhccCCCCCCcCCHHH
Confidence 8899999999754 689999999999999999999999865422211100 0 0 00011112233334567
Q ss_pred HHHHHhcccccCCCCC-----CHHHHHHH
Q 040814 612 IHAGLLCVHDQAVNRP-----TMADVVSC 635 (664)
Q Consensus 612 ~~l~~~Cl~~dP~~RP-----t~~evl~~ 635 (664)
.+++.+|++.+|.+|| ++.++++.
T Consensus 227 ~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 227 RSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred HHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 7888899999999999 99999854
No 263
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.93 E-value=3.5e-25 Score=226.84 Aligned_cols=200 Identities=22% Similarity=0.291 Sum_probs=154.5
Q ss_pred cCccccceeccCCCcCEEEEEEcC-CcEEEEEeccc---------------------------ceEEEEeEeecC--Cee
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG---------------------------RTIRLMGCSLHG--AER 468 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~---------------------------~~v~l~g~~~~~--~~~ 468 (664)
++|++.+.||+|+||.||+|...+ ++.||||.+.. +++++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 478889999999999999999754 89999997631 257888887663 457
Q ss_pred EEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc---------------------
Q 040814 469 ILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------- 527 (664)
Q Consensus 469 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------- 527 (664)
++||||+++++|.+++. +...+++....+++.|++.||.|||+.+++|.|+++.|.
T Consensus 82 ~~v~e~~~~~~L~~~l~---~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~ 158 (265)
T cd06652 82 SIFMEHMPGGSIKDQLK---SYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQT 158 (265)
T ss_pred EEEEEecCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCcccccccc
Confidence 79999999999999984 335689999999999999999999999999998887660
Q ss_pred --------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhh
Q 040814 528 --------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAAL 599 (664)
Q Consensus 528 --------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 599 (664)
....|+..|+|||.+.+..++.++|||||||++|||++|+.||........ + .+......
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~---~---------~~~~~~~~ 226 (265)
T cd06652 159 ICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAA---I---------FKIATQPT 226 (265)
T ss_pred ccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHH---H---------HHHhcCCC
Confidence 113467789999999988899999999999999999999999854321110 0 00111111
Q ss_pred CCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 600 DGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
....+......+..++.+|+. +|++||+++||++
T Consensus 227 ~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 227 NPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred CCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 122344444566777778885 8999999999875
No 264
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=99.93 E-value=1.2e-25 Score=222.28 Aligned_cols=214 Identities=19% Similarity=0.188 Sum_probs=159.2
Q ss_pred cCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc------------------------ceEEEEeEee--cCCeeEEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG------------------------RTIRLMGCSL--HGAERILV 471 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~------------------------~~v~l~g~~~--~~~~~~lV 471 (664)
+.|+..+.|++|.||.||+|+.+ +++.||+|+++. |||.+..... +-+..+||
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V 155 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV 155 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence 46777899999999999999975 489999999853 3566655544 33569999
Q ss_pred EeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc-------------------------
Q 040814 472 YEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN------------------------- 526 (664)
Q Consensus 472 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n------------------------- 526 (664)
||||+. +|...+... ..++...++..+..|+++||+|||...++|+|+++.|
T Consensus 156 Me~~Eh-DLksl~d~m--~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k 232 (419)
T KOG0663|consen 156 MEYVEH-DLKSLMETM--KQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLK 232 (419)
T ss_pred HHHHHh-hHHHHHHhc--cCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCcc
Confidence 999987 888888542 3689999999999999999999999999999999988
Q ss_pred -cccccccCCccchhhhccC-CCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHH--------hcCChhHhh-
Q 040814 527 -TNRVVGTYGYMAPEYAMNG-IVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLW--------KEGKASELM- 595 (664)
Q Consensus 527 -~~~~~Gt~~Y~APE~~~~~-~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~--------~~~~~~~~~- 595 (664)
.+..+-|..|.|||.+.+. .|++..|+||+|||+.||+++++-|.+..+.++++.+..+. ..-.....+
T Consensus 233 ~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k 312 (419)
T KOG0663|consen 233 PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVK 312 (419)
T ss_pred cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhh
Confidence 2345668899999999874 59999999999999999999999998877766665543321 111111111
Q ss_pred --------hhhhCCCCCHH-HHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 596 --------EAALDGPCPEN-ELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 596 --------d~~~~~~~~~~-~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
...++..++.. ..+.-.++.-..+..||.+|.|++|.++.
T Consensus 313 ~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 313 KMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred ccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 11111111111 11333455555788899999999998753
No 265
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.93 E-value=1.5e-25 Score=237.57 Aligned_cols=153 Identities=22% Similarity=0.275 Sum_probs=132.6
Q ss_pred cCccccceeccCCCcCEEEEEEcC-CcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVY 472 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~ 472 (664)
++|++.+.||+|+||.||+++... ++.||+|++++ +++++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 478899999999999999999754 89999998742 2678899999999999999
Q ss_pred eccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-------------------------
Q 040814 473 EFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------------- 527 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------------- 527 (664)
||+++|+|.+++.. ....+++..+..++.||+.||.|||+.+++|+|+++.|.
T Consensus 81 e~~~g~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 158 (331)
T cd05597 81 DYYVGGDLLTLLSK--FEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTV 158 (331)
T ss_pred ecCCCCcHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCc
Confidence 99999999999943 245789999999999999999999999999999888761
Q ss_pred --ccccccCCccchhhhcc-----CCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 040814 528 --NRVVGTYGYMAPEYAMN-----GIVSMKADVFSFGVLLLEIVSGRKNNNCY 573 (664)
Q Consensus 528 --~~~~Gt~~Y~APE~~~~-----~~~s~ksDVySfGvvL~ElltG~~p~~~~ 573 (664)
....||+.|||||++.. ..++.++|||||||++|||++|+.||...
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~ 211 (331)
T cd05597 159 QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 211 (331)
T ss_pred cccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCC
Confidence 11358999999999963 45788999999999999999999998643
No 266
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.93 E-value=1.6e-25 Score=228.56 Aligned_cols=201 Identities=17% Similarity=0.143 Sum_probs=156.3
Q ss_pred ceeccCCCcCEEEEEEc-CCcEEEEEeccc--------------------------ceEEEEeEeecCCeeEEEEeccCC
Q 040814 425 NKLGEGGFGPVYKGKLL-DGQVIAVKRLSG--------------------------RTIRLMGCSLHGAERILVYEFMPN 477 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~--------------------------~~v~l~g~~~~~~~~~lV~Ey~~~ 477 (664)
+.||+|+||.||+|... +++.||+|.+.+ +++++++++..++..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 57999999999999875 489999998742 258899999999999999999999
Q ss_pred CchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc----------------------ccccccCC
Q 040814 478 KSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT----------------------NRVVGTYG 535 (664)
Q Consensus 478 gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~----------------------~~~~Gt~~ 535 (664)
++|..++. ....+++..+..++.||+.||.|||+.+++|.++++.|. ....|+..
T Consensus 82 ~~L~~~l~---~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 158 (260)
T cd05611 82 GDCASLIK---TLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPD 158 (260)
T ss_pred CCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccccccCCCCcC
Confidence 99999984 345789999999999999999999999999999888761 12357788
Q ss_pred ccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHHHHH
Q 040814 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRCIHAG 615 (664)
Q Consensus 536 Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~ 615 (664)
|+|||.+.+..++.++||||||+++|||++|..||........ ... ...... .............+.+++
T Consensus 159 y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~---~~~-~~~~~~------~~~~~~~~~~~~~~~~~i 228 (260)
T cd05611 159 YLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAV---FDN-ILSRRI------NWPEEVKEFCSPEAVDLI 228 (260)
T ss_pred ccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHH---HHH-HHhccc------CCCCcccccCCHHHHHHH
Confidence 9999999888899999999999999999999999864322111 000 000000 001111112345678888
Q ss_pred HhcccccCCCCCCHHHHHHHHhc
Q 040814 616 LLCVHDQAVNRPTMADVVSCLRQ 638 (664)
Q Consensus 616 ~~Cl~~dP~~RPt~~evl~~L~~ 638 (664)
.+||+.+|++||++.++.+.|+.
T Consensus 229 ~~~l~~~p~~R~~~~~~~~~l~~ 251 (260)
T cd05611 229 NRLLCMDPAKRLGANGYQEIKSH 251 (260)
T ss_pred HHHccCCHHHccCCCcHHHHHcC
Confidence 99999999999988777665543
No 267
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.93 E-value=5.5e-25 Score=224.64 Aligned_cols=204 Identities=24% Similarity=0.306 Sum_probs=163.6
Q ss_pred cCccccceeccCCCcCEEEEEEcC-CcEEEEEeccc-----------------------ceEEEEeEeecCCeeEEEEec
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG-----------------------RTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV~Ey 474 (664)
++|++.+.||+|++|.||++.... ++.||||++.. +++++++++..++..++||||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 468888999999999999999865 99999998753 368899999999999999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhh-cCccccccccccc--------------------------
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK-YSRLRMNESKVNT-------------------------- 527 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~-~~~~h~d~~~~n~-------------------------- 527 (664)
+++++|.+++.. ...+++..+..++.|+++||.|||+ .+.+|.++++.|.
T Consensus 81 ~~~~~L~~~l~~---~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~ 157 (264)
T cd06623 81 MDGGSLADLLKK---VGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQC 157 (264)
T ss_pred cCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCcc
Confidence 999999999943 3679999999999999999999999 9999998887761
Q ss_pred ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHH-
Q 040814 528 NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPEN- 606 (664)
Q Consensus 528 ~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~- 606 (664)
....++..|+|||.+.+..++.++||||||+++|||++|+.|+................ . ......+..
T Consensus 158 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~---------~-~~~~~~~~~~ 227 (264)
T cd06623 158 NTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAIC---------D-GPPPSLPAEE 227 (264)
T ss_pred cceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHh---------c-CCCCCCCccc
Confidence 12346788999999998899999999999999999999999986543211111111111 0 011112222
Q ss_pred HHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 607 ELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 607 ~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
....+.+++.+||+.+|++||++.|+++.
T Consensus 228 ~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 228 FSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred CCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 44668888889999999999999999874
No 268
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.93 E-value=2.2e-25 Score=226.73 Aligned_cols=201 Identities=19% Similarity=0.261 Sum_probs=158.1
Q ss_pred CccccceeccCCCcCEEEEEEcC-CcEEEEEeccc------------------------ceEEEEeEeecCCeeEEEEec
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG------------------------RTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~------------------------~~v~l~g~~~~~~~~~lV~Ey 474 (664)
+|+..+.||+|+||.||+|..+. ++.+|+|.+.. +++++++.+.++...++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 47788999999999999999854 88999998742 357888999999999999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc---------------------------
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------- 527 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------- 527 (664)
+++++|.+++.+. ....+++..+..++.|++.||.|||+.+.+|.|+++.|.
T Consensus 81 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~ 159 (257)
T cd08225 81 CDGGDLMKRINRQ-RGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELA 159 (257)
T ss_pred CCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCcccc
Confidence 9999999998542 234689999999999999999999999999998887651
Q ss_pred ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHH
Q 040814 528 NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENE 607 (664)
Q Consensus 528 ~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 607 (664)
....|++.|+|||++.+..++.++|||||||++|||++|+.|+......+ .+. +...... ...+...
T Consensus 160 ~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~---~~~---------~~~~~~~-~~~~~~~ 226 (257)
T cd08225 160 YTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQ---LVL---------KICQGYF-APISPNF 226 (257)
T ss_pred cccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH---HHH---------HHhcccC-CCCCCCC
Confidence 11246778999999988889999999999999999999999985432111 111 1111111 1112223
Q ss_pred HHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 608 LLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 608 ~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
...+.+++.+||+.+|++|||+.|+++
T Consensus 227 ~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 227 SRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred CHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 345778888999999999999999986
No 269
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.93 E-value=3.4e-25 Score=225.66 Aligned_cols=195 Identities=25% Similarity=0.405 Sum_probs=150.1
Q ss_pred ceeccCCCcCEEEEEEcC-C----------cEEEEEeccc---------------------ceEEEEeEeecCCeeEEEE
Q 040814 425 NKLGEGGFGPVYKGKLLD-G----------QVIAVKRLSG---------------------RTIRLMGCSLHGAERILVY 472 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~~-~----------~~vavK~~~~---------------------~~v~l~g~~~~~~~~~lV~ 472 (664)
+.||+|+||.||+|...+ + ..|++|.+.. +++++++++.. ...++||
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~ 79 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE 79 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence 469999999999999865 3 2578886642 36889999888 7789999
Q ss_pred eccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-----c-------------------
Q 040814 473 EFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-----N------------------- 528 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-----~------------------- 528 (664)
||+++|+|.+++... ...+++..+..++.||+.||.|||+.+++|+|+++.|. .
T Consensus 80 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~ 157 (259)
T cd05037 80 EYVKFGPLDVFLHRE--KNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPIT 157 (259)
T ss_pred EcCCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCcccc
Confidence 999999999999542 23789999999999999999999999999999999881 1
Q ss_pred -----cccccCCccchhhhccC--CCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhC
Q 040814 529 -----RVVGTYGYMAPEYAMNG--IVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALD 600 (664)
Q Consensus 529 -----~~~Gt~~Y~APE~~~~~--~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 600 (664)
...++..|+|||++.+. .++.++|||||||++|||++ |..|+......+... .+. . .
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~----~~~--------~---~ 222 (259)
T cd05037 158 VLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKER----FYQ--------D---Q 222 (259)
T ss_pred cccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHH----HHh--------c---C
Confidence 12356789999999876 78999999999999999999 466665432111110 000 0 0
Q ss_pred CCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHh
Q 040814 601 GPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLR 637 (664)
Q Consensus 601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~ 637 (664)
...+......+.+++.+||+.+|.+|||+.+|++.|+
T Consensus 223 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 223 HRLPMPDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred CCCCCCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 1111111266788889999999999999999999874
No 270
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.93 E-value=1.2e-25 Score=234.08 Aligned_cols=198 Identities=19% Similarity=0.257 Sum_probs=153.5
Q ss_pred ccceeccCCCcCEEEEEEc-CCcEEEEEeccc----------------------ceEEEEeEeecCCeeEEEEeccCCCc
Q 040814 423 TTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG----------------------RTIRLMGCSLHGAERILVYEFMPNKS 479 (664)
Q Consensus 423 ~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~----------------------~~v~l~g~~~~~~~~~lV~Ey~~~gs 479 (664)
....||+|+||.||++... +++.||||++.. +++++++.+..++..++||||+++++
T Consensus 26 ~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~ 105 (292)
T cd06658 26 SFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGA 105 (292)
T ss_pred hhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCc
Confidence 3467999999999999975 488999998742 35777888888899999999999999
Q ss_pred hhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------cccccc
Q 040814 480 LDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NRVVGT 533 (664)
Q Consensus 480 L~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~~~Gt 533 (664)
|.+++. ...+++..+..++.||+.||.|||+.+++|+|+++.|. ....|+
T Consensus 106 L~~~~~----~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~ 181 (292)
T cd06658 106 LTDIVT----HTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGT 181 (292)
T ss_pred HHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecC
Confidence 999883 34689999999999999999999999999999888761 123477
Q ss_pred CCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHHH
Q 040814 534 YGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRCIH 613 (664)
Q Consensus 534 ~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~ 613 (664)
..|+|||.+.+..++.++|||||||++|||++|+.||........... .. ......... .......+..
T Consensus 182 ~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~----~~-----~~~~~~~~~--~~~~~~~~~~ 250 (292)
T cd06658 182 PYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRR----IR-----DNLPPRVKD--SHKVSSVLRG 250 (292)
T ss_pred ccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH----HH-----hcCCCcccc--ccccCHHHHH
Confidence 889999999988899999999999999999999999864322111100 00 001111111 1122334667
Q ss_pred HHHhcccccCCCCCCHHHHHHH
Q 040814 614 AGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 614 l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
++.+||+.||.+|||++|+++.
T Consensus 251 li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 251 FLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred HHHHHccCChhHCcCHHHHhhC
Confidence 7778999999999999999864
No 271
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.93 E-value=2.4e-25 Score=231.97 Aligned_cols=202 Identities=22% Similarity=0.315 Sum_probs=159.3
Q ss_pred cCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc----------------------ceEEEEeEeecCCeeEEEEecc
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG----------------------RTIRLMGCSLHGAERILVYEFM 475 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~----------------------~~v~l~g~~~~~~~~~lV~Ey~ 475 (664)
++|...+.||+|+||.||++... +++.||+|.+.. +++++++.+..++..++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 57888899999999999999864 588999998742 3688889999999999999999
Q ss_pred CCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------cc
Q 040814 476 PNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NR 529 (664)
Q Consensus 476 ~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~ 529 (664)
++++|.+++. ...+++..+..++.|++.||.|||+.+.+|.|+++.|. ..
T Consensus 99 ~~~~L~~~~~----~~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~ 174 (293)
T cd06647 99 AGGSLTDVVT----ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST 174 (293)
T ss_pred CCCcHHHHHh----hcCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccccccc
Confidence 9999999983 34688999999999999999999999999998887661 11
Q ss_pred ccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHH
Q 040814 530 VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELL 609 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 609 (664)
..|++.|+|||.+.+..++.++|||||||++||+++|+.||...........+ ...+ ......+.....
T Consensus 175 ~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~---~~~~--------~~~~~~~~~~~~ 243 (293)
T cd06647 175 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI---ATNG--------TPELQNPEKLSA 243 (293)
T ss_pred ccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeeh---hcCC--------CCCCCCccccCH
Confidence 24677899999998888999999999999999999999998654322211100 0000 000111222334
Q ss_pred HHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 610 RCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 610 ~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
.+.+++.+||+.+|++||++.+++..
T Consensus 244 ~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 244 IFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcC
Confidence 57778889999999999999999865
No 272
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.93 E-value=1.7e-25 Score=240.50 Aligned_cols=213 Identities=18% Similarity=0.155 Sum_probs=155.3
Q ss_pred HhcCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc------------------------ceEEEEeEeecC------
Q 040814 417 ATNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG------------------------RTIRLMGCSLHG------ 465 (664)
Q Consensus 417 ~t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~------------------------~~v~l~g~~~~~------ 465 (664)
..++|+..+.||+|+||.||++... .++.||||++.. +++++++.+...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 3578999999999999999999975 488999998852 256777766433
Q ss_pred CeeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc------------------
Q 040814 466 AERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------ 527 (664)
Q Consensus 466 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------ 527 (664)
...++||||+++ +|..++. ..+++..+..++.|+++||.|||+.+++|+|+++.|.
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~ 175 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 175 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHH-----hcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccc
Confidence 357999999975 6666662 3588999999999999999999999999999998771
Q ss_pred -------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcC----------C
Q 040814 528 -------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEG----------K 590 (664)
Q Consensus 528 -------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~----------~ 590 (664)
....||..|+|||++.+..++.++|||||||++|||++|+.||...+..+....+....... .
T Consensus 176 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (364)
T cd07875 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPT 255 (364)
T ss_pred cCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHH
Confidence 22367889999999999999999999999999999999999997544322111110000000 0
Q ss_pred hhHhhhh---------------hh---CCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 591 ASELMEA---------------AL---DGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 591 ~~~~~d~---------------~~---~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
....... .. ...........+.+++.+|++.||.+|||+.|+++.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000000 00 000011123457788999999999999999999874
No 273
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.93 E-value=2.9e-25 Score=232.12 Aligned_cols=213 Identities=18% Similarity=0.257 Sum_probs=157.9
Q ss_pred cCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-----------------------ceEEEEeEeecCCeeEEEEec
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-----------------------RTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV~Ey 474 (664)
++|...+.||+|+||.||+|..+ +++.||+|.+.. +++++++++..+...++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 56888999999999999999975 488999998742 368999999999999999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------c
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------N 528 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~ 528 (664)
++ ++|..++.. ....+++..+..++.||++||.|||+.+++|.|+++.|. .
T Consensus 86 ~~-~~l~~~l~~--~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 162 (301)
T cd07873 86 LD-KDLKQYLDD--CGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYS 162 (301)
T ss_pred cc-cCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCccc
Confidence 97 589888853 245689999999999999999999999999999888761 1
Q ss_pred cccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhc---CChhHhhh--------
Q 040814 529 RVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKE---GKASELME-------- 596 (664)
Q Consensus 529 ~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~d-------- 596 (664)
...+++.|+|||.+.+ ..++.++|||||||++|||++|+.||...+..+....+...... .....+..
T Consensus 163 ~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (301)
T cd07873 163 NEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYN 242 (301)
T ss_pred ccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccc
Confidence 1245778999999875 45889999999999999999999998754432222111110000 00000000
Q ss_pred -hhhCCCC----CHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 597 -AALDGPC----PENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 597 -~~~~~~~----~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
+.....+ .......+.+++.+|++.||.+|||++|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 243 YPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred cCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0000000 0112335678889999999999999999986
No 274
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.93 E-value=6.8e-26 Score=227.78 Aligned_cols=215 Identities=17% Similarity=0.210 Sum_probs=163.3
Q ss_pred CccccceeccCCCcCEEEEEEcC-CcEEEEEec------------------ccceEEEEeEeecCCe-----eEEEEecc
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRL------------------SGRTIRLMGCSLHGAE-----RILVYEFM 475 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~------------------~~~~v~l~g~~~~~~~-----~~lV~Ey~ 475 (664)
.|...+++|.|+||.||+|.+.. ++.||||+. |+|+|+|+-++.+..+ ..||||||
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleym 104 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYM 104 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhc
Confidence 35556899999999999999855 799999987 3568999888765322 35999999
Q ss_pred CCCchhHHhhcc-cccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------c
Q 040814 476 PNKSLDFFIFDS-VKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------N 528 (664)
Q Consensus 476 ~~gsL~~~l~~~-~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~ 528 (664)
|. +|.+++.+. ..+..++.-.+.-+..||.+||.|||+.++.|+|+||.|. .
T Consensus 105 P~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epni 183 (364)
T KOG0658|consen 105 PE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPNI 183 (364)
T ss_pred hH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeeccCCCce
Confidence 97 888888542 1246788888889999999999999999999999999981 1
Q ss_pred cccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhh----------h
Q 040814 529 RVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELME----------A 597 (664)
Q Consensus 529 ~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d----------~ 597 (664)
...-|..|.|||.+.+ ..|+.+.||||.|||+.||+-|++-|.+.+..+++..+-.++.-...+++.. +
T Consensus 184 SYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p 263 (364)
T KOG0658|consen 184 SYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFP 263 (364)
T ss_pred eEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCc
Confidence 1234678999999987 5699999999999999999999999988776666555544333222222211 1
Q ss_pred hhCC-----CCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 598 ALDG-----PCPENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 598 ~~~~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
.+.. -.......+.++++.++++.+|.+|.++.|++..
T Consensus 264 ~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 264 QIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred ccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 1111 1222445668889999999999999999998743
No 275
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.93 E-value=1.6e-25 Score=224.96 Aligned_cols=217 Identities=22% Similarity=0.299 Sum_probs=167.2
Q ss_pred HHHHHHHhcCccccceeccCCCcCEEEEEEcC------CcEEEEEeccc-----------------------ceEEEEeE
Q 040814 411 FQTIAAATNNFSTTNKLGEGGFGPVYKGKLLD------GQVIAVKRLSG-----------------------RTIRLMGC 461 (664)
Q Consensus 411 ~~~i~~~t~~~~~~~~lg~G~fg~Vy~~~~~~------~~~vavK~~~~-----------------------~~v~l~g~ 461 (664)
..++....++++....+-+|.||+||.|.+.+ .+.|-+|.++. ++..+.+.
T Consensus 276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V 355 (563)
T KOG1024|consen 276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV 355 (563)
T ss_pred HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence 34566667788888999999999999996533 35566776643 46778888
Q ss_pred eecC-CeeEEEEeccCCCchhHHhh-----cccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------
Q 040814 462 SLHG-AERILVYEFMPNKSLDFFIF-----DSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-------- 527 (664)
Q Consensus 462 ~~~~-~~~~lV~Ey~~~gsL~~~l~-----~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-------- 527 (664)
+.++ +..+++|.++.-|+|..||. +......++-.+...++.|++.|++|||+++.+|-|+...|.
T Consensus 356 ~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqV 435 (563)
T KOG1024|consen 356 SIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQV 435 (563)
T ss_pred EeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeE
Confidence 7764 55789999999999999997 433445688888999999999999999999999988776651
Q ss_pred ---------------cccc-----ccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHH
Q 040814 528 ---------------NRVV-----GTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLW 586 (664)
Q Consensus 528 ---------------~~~~-----Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~ 586 (664)
.... ....||+||.+.+..|+.++|||||||+||||+| |+.|+...++.+ +..+ .
T Consensus 436 kltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfE---m~~y-l 511 (563)
T KOG1024|consen 436 KLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFE---MEHY-L 511 (563)
T ss_pred EeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHH---HHHH-H
Confidence 0011 2357999999999999999999999999999999 888875433222 1111 1
Q ss_pred hcCChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhccc
Q 040814 587 KEGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNN 640 (664)
Q Consensus 587 ~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 640 (664)
++ ..+-.-|.+++.++..++..||...|++||+++|++..|.+-.
T Consensus 512 kd---------GyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~ 556 (563)
T KOG1024|consen 512 KD---------GYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFH 556 (563)
T ss_pred hc---------cceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence 11 1222335567788999999999999999999999999997654
No 276
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.93 E-value=5.7e-25 Score=228.00 Aligned_cols=206 Identities=24% Similarity=0.296 Sum_probs=162.0
Q ss_pred HhcCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc---------------------ceEEEEeEeecCCeeEEEEec
Q 040814 417 ATNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG---------------------RTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 417 ~t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~---------------------~~v~l~g~~~~~~~~~lV~Ey 474 (664)
.+++|+..+.||+|++|.||+|..+ +++.+|+|++.. +++++++++..+...++|+||
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 96 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEY 96 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEec
Confidence 4567888899999999999999986 588999998852 368899999999999999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------c
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------N 528 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~ 528 (664)
+++++|.+++... ...+++..+..++.|++.||.|||+.+++|.++++.|. .
T Consensus 97 ~~~~~L~~~l~~~--~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 174 (286)
T cd06614 97 MDGGSLTDIITQN--FVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRN 174 (286)
T ss_pred cCCCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhc
Confidence 9999999999542 13899999999999999999999999999999888771 1
Q ss_pred cccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHH
Q 040814 529 RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENEL 608 (664)
Q Consensus 529 ~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 608 (664)
...++..|+|||++.+..++.++|||||||++|||++|+.|+......... .. ....... ....+....
T Consensus 175 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~---~~-~~~~~~~-------~~~~~~~~~ 243 (286)
T cd06614 175 SVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRAL---FL-ITTKGIP-------PLKNPEKWS 243 (286)
T ss_pred cccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHH---HH-HHhcCCC-------CCcchhhCC
Confidence 123667899999999888999999999999999999999998643221111 00 0000000 001111133
Q ss_pred HHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 609 LRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 609 ~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
..+.+++.+||+.+|.+|||+.+|++.
T Consensus 244 ~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 244 PEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred HHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 557788899999999999999999863
No 277
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.93 E-value=4.5e-25 Score=225.08 Aligned_cols=203 Identities=18% Similarity=0.230 Sum_probs=159.5
Q ss_pred CccccceeccCCCcCEEEEEEc-CCcEEEEEeccc------------------------ceEEEEeEeec--CCeeEEEE
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG------------------------RTIRLMGCSLH--GAERILVY 472 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~------------------------~~v~l~g~~~~--~~~~~lV~ 472 (664)
+|++.+.||.|+||.||++... +++.+|+|++.. +++++++++.. +...+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 4778899999999999999874 588999998742 35788887653 45578999
Q ss_pred eccCCCchhHHhhccc-ccCCCCHHHHHHHHHHHHHHHHHhh-----hcCcccccccccc--------------------
Q 040814 473 EFMPNKSLDFFIFDSV-KKKQLNWSKRITIIEGIAQGLIYLH-----KYSRLRMNESKVN-------------------- 526 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~I~~~ia~gL~yLH-----~~~~~h~d~~~~n-------------------- 526 (664)
||+++++|.+++.... ....+++..++.++.||+.||.||| +.+.+|.|+++.|
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 9999999999985432 2467999999999999999999999 8889999888776
Q ss_pred ------cccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhC
Q 040814 527 ------TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALD 600 (664)
Q Consensus 527 ------~~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 600 (664)
.....|+..|+|||.+.+..++.++||||||+++|||++|+.|+...+.. .+. +.+.....
T Consensus 161 ~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~----------~~~~~~~~ 227 (265)
T cd08217 161 GHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL---QLA----------SKIKEGKF 227 (265)
T ss_pred cCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH---HHH----------HHHhcCCC
Confidence 11235788999999999888999999999999999999999998654311 111 11111111
Q ss_pred CCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 601 GPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
...+......+.+++.+||+.+|++|||+.+|++.
T Consensus 228 ~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 228 RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred CCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 22334455678889999999999999999999864
No 278
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.93 E-value=3.9e-25 Score=227.13 Aligned_cols=204 Identities=18% Similarity=0.267 Sum_probs=147.0
Q ss_pred ceeccCCCcCEEEEEEcCC---cEEEEEecc-----------------------cceEEEEeEeecCCeeEEEEeccCCC
Q 040814 425 NKLGEGGFGPVYKGKLLDG---QVIAVKRLS-----------------------GRTIRLMGCSLHGAERILVYEFMPNK 478 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~~~---~~vavK~~~-----------------------~~~v~l~g~~~~~~~~~lV~Ey~~~g 478 (664)
++||+|+||.||+|...++ ..+++|.+. ++++++++.|......++||||+++|
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 3699999999999986442 356677553 24689999999999999999999999
Q ss_pred chhHHhhcccc-cCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc----------------------------cc
Q 040814 479 SLDFFIFDSVK-KKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT----------------------------NR 529 (664)
Q Consensus 479 sL~~~l~~~~~-~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~----------------------------~~ 529 (664)
+|.+++..... ...+++.....++.||++||.|||+.+++|+|+++.|. ..
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 160 (268)
T cd05086 81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDD 160 (268)
T ss_pred cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcccC
Confidence 99999965322 24567788889999999999999999999999998871 11
Q ss_pred ccccCCccchhhhcc-------CCCCccchHHHHHHHHHHHHhC-CCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCC
Q 040814 530 VVGTYGYMAPEYAMN-------GIVSMKADVFSFGVLLLEIVSG-RKNNNCYDEERPLNLVGYLWKEGKASELMEAALDG 601 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~~-------~~~s~ksDVySfGvvL~ElltG-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 601 (664)
..++..|+|||++.. ..++.++|||||||++|||+++ ..||...... ........+ ....+.++.+..
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~ 236 (268)
T cd05086 161 KCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDR---EVLNHVIKD-QQVKLFKPQLEL 236 (268)
T ss_pred CcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHHhh-cccccCCCccCC
Confidence 235678999999853 2457899999999999999974 5676433221 111111111 111222222221
Q ss_pred CCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHh
Q 040814 602 PCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLR 637 (664)
Q Consensus 602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~ 637 (664)
....++.+++..|| .+|++||++++|++.|.
T Consensus 237 ----~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 237 ----PYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred ----CCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 22345666777799 57999999999999874
No 279
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.93 E-value=8.6e-25 Score=226.10 Aligned_cols=214 Identities=20% Similarity=0.252 Sum_probs=158.5
Q ss_pred CccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-----------------------ceEEEEeEeecCCeeEEEEecc
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-----------------------RTIRLMGCSLHGAERILVYEFM 475 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV~Ey~ 475 (664)
+|+..+.||+|++|.||+|+.. +++.||||++.. +++++++++.+.+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 5788899999999999999985 489999997742 3689999999999999999999
Q ss_pred CCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------cc
Q 040814 476 PNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NR 529 (664)
Q Consensus 476 ~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~ 529 (664)
++ +|.+++........+++..+..++.||+.||.|||+.+.+|.|+++.|. ..
T Consensus 81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~ 159 (284)
T cd07836 81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSN 159 (284)
T ss_pred Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcccccc
Confidence 85 8888886544345799999999999999999999999999999888761 12
Q ss_pred ccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCC---hhHhhh-hhhCC---
Q 040814 530 VVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGK---ASELME-AALDG--- 601 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~d-~~~~~--- 601 (664)
..++..|+|||.+.+ ..++.++|||||||++|||++|+.||...+..+....+........ ...+.+ +....
T Consensus 160 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd07836 160 EVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFP 239 (284)
T ss_pred ccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhccccc
Confidence 345778999999876 4578999999999999999999999875543322111100000000 000000 00000
Q ss_pred --------CCCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 602 --------PCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 602 --------~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
.........+.+++.+|++.||++||++.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 240 RYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred CCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 001122345778888999999999999999875
No 280
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.92 E-value=7.7e-25 Score=223.71 Aligned_cols=200 Identities=24% Similarity=0.398 Sum_probs=156.6
Q ss_pred CccccceeccCCCcCEEEEEEc-CCcEEEEEeccc------------------------ceEEEEeEeecCCeeEEEEec
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG------------------------RTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~------------------------~~v~l~g~~~~~~~~~lV~Ey 474 (664)
+|+..+.||+|+||.||+|... +++.||+|.+.. +++++++.+...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 4778899999999999999975 589999998753 257889999889999999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc---------------------------
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------- 527 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------- 527 (664)
+++++|.+++.. ...+++..+..|+.|+++||.|||+.+++|.|+++.|.
T Consensus 81 ~~~~~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~ 157 (264)
T cd06626 81 CSGGTLEELLEH---GRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMG 157 (264)
T ss_pred CCCCcHHHHHhh---cCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCccc
Confidence 999999999843 34689999999999999999999999999998887661
Q ss_pred ---ccccccCCccchhhhccCC---CCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCC
Q 040814 528 ---NRVVGTYGYMAPEYAMNGI---VSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDG 601 (664)
Q Consensus 528 ---~~~~Gt~~Y~APE~~~~~~---~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 601 (664)
....++..|+|||++.+.. ++.++||||||+++|||++|+.||........ ..+....+ ...
T Consensus 158 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~---~~~~~~~~---------~~~ 225 (264)
T cd06626 158 EEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQ---IMFHVGAG---------HKP 225 (264)
T ss_pred ccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHH---HHHHHhcC---------CCC
Confidence 0134677899999998766 89999999999999999999999864321111 00000000 011
Q ss_pred CCCHH--HHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 602 PCPEN--ELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 602 ~~~~~--~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
..+.. ....+.+++.+||+.+|++|||+.|++.
T Consensus 226 ~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 226 PIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred CCCcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 11221 2455678888999999999999999874
No 281
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.92 E-value=4.9e-25 Score=225.41 Aligned_cols=204 Identities=23% Similarity=0.327 Sum_probs=160.6
Q ss_pred cCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-----------------------ceEEEEeEeecCCeeEEEEec
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-----------------------RTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV~Ey 474 (664)
++|+..+.||+|+||.||++..+ +++.+|+|++.. +++++++.+..+...++|+||
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 46777899999999999999986 489999998753 257788888888999999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhh-cCccccccccccc------------------------cc
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK-YSRLRMNESKVNT------------------------NR 529 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~-~~~~h~d~~~~n~------------------------~~ 529 (664)
+++++|.+++... ...+++..+..++.|++.||.|||+ .+.+|.|+++.|. ..
T Consensus 81 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~ 158 (265)
T cd06605 81 MDGGSLDKILKEV--QGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKT 158 (265)
T ss_pred cCCCcHHHHHHHc--cCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhc
Confidence 9999999998532 2678999999999999999999999 9999999887761 11
Q ss_pred ccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCC---CCCHH
Q 040814 530 VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDG---PCPEN 606 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~ 606 (664)
..++..|+|||.+.+..++.++||||||+++|||++|+.|+........ ...+.++..... ..+..
T Consensus 159 ~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~ 227 (265)
T cd06605 159 FVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPD-----------GIFELLQYIVNEPPPRLPSG 227 (265)
T ss_pred ccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccc-----------cHHHHHHHHhcCCCCCCChh
Confidence 3577889999999998999999999999999999999999864422111 011111111111 11222
Q ss_pred -HHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 607 -ELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 607 -~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
....+.+++.+||..+|++|||+.|++..
T Consensus 228 ~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 228 KFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred hcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 34557788889999999999999998753
No 282
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.92 E-value=5.8e-25 Score=233.73 Aligned_cols=205 Identities=21% Similarity=0.189 Sum_probs=169.2
Q ss_pred HhcCccccceeccCCCcCEEEEEEcC-CcEEEEEeccc--------------------------ceEEEEeEeecCCeeE
Q 040814 417 ATNNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG--------------------------RTIRLMGCSLHGAERI 469 (664)
Q Consensus 417 ~t~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~--------------------------~~v~l~g~~~~~~~~~ 469 (664)
..+.|++.+.||+|.||.||+++.+. |+.+|+|.+.+ ++|.+.+.+......+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 34578888999999999999999866 99999998843 4799999999999999
Q ss_pred EEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc-----------------------
Q 040814 470 LVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN----------------------- 526 (664)
Q Consensus 470 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n----------------------- 526 (664)
+|||+|.+|.|.+.|... .+++.....++.||+.++.|||+.+++|+|++|+|
T Consensus 113 lvmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~ 188 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKF 188 (382)
T ss_pred EEEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceE
Confidence 999999999999999543 39999999999999999999999999999999987
Q ss_pred ------cccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhC
Q 040814 527 ------TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALD 600 (664)
Q Consensus 527 ------~~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 600 (664)
...++||+.|+|||++....|+..+||||.||++|.|++|.+||........... ...++. ...
T Consensus 189 ~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~----i~~~~~------~f~ 258 (382)
T KOG0032|consen 189 IKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLA----ILRGDF------DFT 258 (382)
T ss_pred ccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHH----HHcCCC------CCC
Confidence 2346799999999999999999999999999999999999999976554332211 111111 112
Q ss_pred CCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 601 GPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
.+.-......+.+++..++..||.+|+|+.++++.
T Consensus 259 ~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 259 SEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred CCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 22223345566677778999999999999999983
No 283
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=5e-26 Score=238.36 Aligned_cols=200 Identities=28% Similarity=0.388 Sum_probs=158.9
Q ss_pred ccccceeccCCCcCEEEEEE-cCCcEEEEEecc-------------------------cceEEEEeEeecCCeeEEEEec
Q 040814 421 FSTTNKLGEGGFGPVYKGKL-LDGQVIAVKRLS-------------------------GRTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 421 ~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~-------------------------~~~v~l~g~~~~~~~~~lV~Ey 474 (664)
|+..+.||.|+||.||-++. .+.+.||||+++ ++.|.+.||+..+...+|||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 56678999999999999997 458999999984 3468899999999999999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc----------------------cccccc
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN----------------------TNRVVG 532 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n----------------------~~~~~G 532 (664)
|- ||-.+.|. ...++|.+.++..|+.+.+.||.|||+++.+|+|++..| .+.++|
T Consensus 108 Cl-GSAsDlle--VhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsFvG 184 (948)
T KOG0577|consen 108 CL-GSASDLLE--VHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSFVG 184 (948)
T ss_pred Hh-ccHHHHHH--HHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCchhcccC
Confidence 96 46666663 235789999999999999999999999999999999877 456789
Q ss_pred cCCccchhhhc---cCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHH
Q 040814 533 TYGYMAPEYAM---NGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELL 609 (664)
Q Consensus 533 t~~Y~APE~~~---~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 609 (664)
||.|||||++. .+.|+-|+||||+||++.||.-.++|....+.. ..+.++ .+.+. +.+. ..+...
T Consensus 185 TPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAM---SALYHI-AQNes-----PtLq---s~eWS~ 252 (948)
T KOG0577|consen 185 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM---SALYHI-AQNES-----PTLQ---SNEWSD 252 (948)
T ss_pred CccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHH---HHHHHH-HhcCC-----CCCC---CchhHH
Confidence 99999999985 578999999999999999999999996543321 111111 11111 1111 234556
Q ss_pred HHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 610 RCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 610 ~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
.+..++-.||++-|.+|||.+++++.
T Consensus 253 ~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 253 YFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred HHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 67777778999999999999988753
No 284
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.92 E-value=7.1e-25 Score=228.61 Aligned_cols=213 Identities=21% Similarity=0.201 Sum_probs=156.6
Q ss_pred CccccceeccCCCcCEEEEEEc-CCcEEEEEeccc---------------------------ceEEEEeEeecCCeeEEE
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG---------------------------RTIRLMGCSLHGAERILV 471 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~---------------------------~~v~l~g~~~~~~~~~lV 471 (664)
+|+..+.||+|+||.||+|... +++.||||++.. +++++++++.+++..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4777899999999999999975 489999998742 257888899888899999
Q ss_pred EeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc------------------------
Q 040814 472 YEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------------ 527 (664)
Q Consensus 472 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------------ 527 (664)
|||+ +|+|.+++... ...+++..+..++.||++||.|||+.+++|.|+++.|.
T Consensus 81 ~e~~-~~~L~~~i~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~ 157 (298)
T cd07841 81 FEFM-ETDLEKVIKDK--SIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNR 157 (298)
T ss_pred Eccc-CCCHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCc
Confidence 9999 89999999532 23799999999999999999999999999999988771
Q ss_pred --ccccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcC---------ChhHhh
Q 040814 528 --NRVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEG---------KASELM 595 (664)
Q Consensus 528 --~~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 595 (664)
....+++.|+|||.+.+ ..++.++|||||||++|||++|.+||......+....+....... ......
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (298)
T cd07841 158 KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYV 237 (298)
T ss_pred cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccc
Confidence 01134567999999865 467999999999999999999987776443322111110000000 000000
Q ss_pred hhhhCCCC-----CHHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 596 EAALDGPC-----PENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 596 d~~~~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
........ .......+.+++.+||+.+|++|||+.|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 238 EFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred cccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 00000011 12234568889999999999999999999984
No 285
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.92 E-value=7e-25 Score=225.44 Aligned_cols=206 Identities=24% Similarity=0.341 Sum_probs=155.6
Q ss_pred ccccceeccCCCcCEEEEEEc----CCcEEEEEeccc------------------------ceEEEEeEeecCC------
Q 040814 421 FSTTNKLGEGGFGPVYKGKLL----DGQVIAVKRLSG------------------------RTIRLMGCSLHGA------ 466 (664)
Q Consensus 421 ~~~~~~lg~G~fg~Vy~~~~~----~~~~vavK~~~~------------------------~~v~l~g~~~~~~------ 466 (664)
|.+.+.||+|+||.||+|.+. .++.||||++.. +++++++++...+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 456789999999999999863 368899997753 2578888776532
Q ss_pred eeEEEEeccCCCchhHHhhccc---ccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc----------------
Q 040814 467 ERILVYEFMPNKSLDFFIFDSV---KKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT---------------- 527 (664)
Q Consensus 467 ~~~lV~Ey~~~gsL~~~l~~~~---~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~---------------- 527 (664)
..++++||+++|+|..++.... +...+++.....++.||+.||+|||+.+++|+|+++.|.
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~ 160 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLS 160 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECccccc
Confidence 2378999999999998875321 123588999999999999999999999999999998871
Q ss_pred ------------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHh
Q 040814 528 ------------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASEL 594 (664)
Q Consensus 528 ------------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (664)
....++..|++||.+.+..++.++|||||||++|||++ |+.||...... ....+.....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~---~~~~~~~~~~----- 232 (273)
T cd05074 161 KKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS---EIYNYLIKGN----- 232 (273)
T ss_pred ccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH---HHHHHHHcCC-----
Confidence 00113457999999998889999999999999999999 88887543221 1111111100
Q ss_pred hhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhcc
Q 040814 595 MEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQN 639 (664)
Q Consensus 595 ~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 639 (664)
....+......+.+++.+||+.+|++||++.++++.|+++
T Consensus 233 -----~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 233 -----RLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred -----cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0111223446788899999999999999999999999865
No 286
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.92 E-value=7.2e-25 Score=229.85 Aligned_cols=202 Identities=25% Similarity=0.347 Sum_probs=155.7
Q ss_pred cCccccceeccCCCcCEEEEEEc-CCcEEEEEecc-------------------------cceEEEEeEeecCCeeEEEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLS-------------------------GRTIRLMGCSLHGAERILVY 472 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~-------------------------~~~v~l~g~~~~~~~~~lV~ 472 (664)
+.|+..+.||+|+||.||+|... +++.||+|++. ++++++.+++..++..++|+
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 45778899999999999999975 48999999874 23689999999999999999
Q ss_pred eccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc----------------------ccc
Q 040814 473 EFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT----------------------NRV 530 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~----------------------~~~ 530 (664)
||++ |+|.+++.. ....+++..+..++.||+.||.|||+.+++|+++++.|. ...
T Consensus 95 e~~~-g~l~~~~~~--~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~~ 171 (307)
T cd06607 95 EYCL-GSASDILEV--HKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSF 171 (307)
T ss_pred HhhC-CCHHHHHHH--cccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCCCCc
Confidence 9997 566666632 235699999999999999999999999999999988771 123
Q ss_pred cccCCccchhhhc---cCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHH
Q 040814 531 VGTYGYMAPEYAM---NGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENE 607 (664)
Q Consensus 531 ~Gt~~Y~APE~~~---~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 607 (664)
.++..|+|||++. ...++.++||||||+++|||++|+.|+...+.... .... .... .....+...
T Consensus 172 ~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~---~~~~-~~~~--------~~~~~~~~~ 239 (307)
T cd06607 172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA---LYHI-AQND--------SPTLSSNDW 239 (307)
T ss_pred cCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHH---HHHH-hcCC--------CCCCCchhh
Confidence 4678899999884 45688999999999999999999999854321110 0000 0000 000111223
Q ss_pred HHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 608 LLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 608 ~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
...+.+++.+||+.+|++||++.+|+..
T Consensus 240 ~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 240 SDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred CHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 4567888899999999999999999864
No 287
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.92 E-value=9.1e-25 Score=222.10 Aligned_cols=201 Identities=31% Similarity=0.463 Sum_probs=157.0
Q ss_pred cccceeccCCCcCEEEEEEcC-----CcEEEEEeccc-----------------------ceEEEEeEeecCCeeEEEEe
Q 040814 422 STTNKLGEGGFGPVYKGKLLD-----GQVIAVKRLSG-----------------------RTIRLMGCSLHGAERILVYE 473 (664)
Q Consensus 422 ~~~~~lg~G~fg~Vy~~~~~~-----~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV~E 473 (664)
++.+.||+|+||.||++...+ ++.||+|++.. +++++++++...+..+++||
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e 81 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME 81 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence 456899999999999999854 38899998863 25889999999999999999
Q ss_pred ccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------
Q 040814 474 FMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-------------------------- 527 (664)
Q Consensus 474 y~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-------------------------- 527 (664)
|+++++|.+++.... ...+++..+..++.|++.||.|||+.+.+|.|+++.|.
T Consensus 82 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 160 (258)
T smart00219 82 YMEGGDLLDYLRKNR-PKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYK 160 (258)
T ss_pred ccCCCCHHHHHHhhh-hccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecccccccc
Confidence 999999999985421 12299999999999999999999999999999988771
Q ss_pred -ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCH
Q 040814 528 -NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPE 605 (664)
Q Consensus 528 -~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 605 (664)
....+++.|+|||.+.+..++.++||||+|++++||++ |+.|+....... ..... .. ......+.
T Consensus 161 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~---~~~~~-~~---------~~~~~~~~ 227 (258)
T smart00219 161 KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEE---VLEYL-KK---------GYRLPKPE 227 (258)
T ss_pred cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHH-hc---------CCCCCCCC
Confidence 01125678999999988889999999999999999999 778775422111 11111 00 01111222
Q ss_pred HHHHHHHHHHHhcccccCCCCCCHHHHHHHH
Q 040814 606 NELLRCIHAGLLCVHDQAVNRPTMADVVSCL 636 (664)
Q Consensus 606 ~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L 636 (664)
....++.+++.+||+.+|++|||+.|+++.|
T Consensus 228 ~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 228 NCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred cCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 3455678889999999999999999999865
No 288
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=3.3e-25 Score=228.89 Aligned_cols=205 Identities=20% Similarity=0.310 Sum_probs=175.0
Q ss_pred CccccceeccCCCcCEEEEEE-cCCcEEEEEeccc------------------------ceEEEEeEeecCCeeEEEEec
Q 040814 420 NFSTTNKLGEGGFGPVYKGKL-LDGQVIAVKRLSG------------------------RTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~------------------------~~v~l~g~~~~~~~~~lV~Ey 474 (664)
-|...+.||+|.|..|-++++ -.|+.||||++.+ |+|+|+........+|||+|.
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL 98 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL 98 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence 366678999999999999985 5799999999854 479999999999999999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc--------------------------cc
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN--------------------------TN 528 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n--------------------------~~ 528 (664)
=.+|+|++||..+ ...+.+....+++.||+.|+.|+|+...+|+|++|+| .+
T Consensus 99 GD~GDl~DyImKH--e~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~ 176 (864)
T KOG4717|consen 99 GDGGDLFDYIMKH--EEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLT 176 (864)
T ss_pred cCCchHHHHHHhh--hccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCcchhh
Confidence 9999999999643 4579999999999999999999999999999999998 24
Q ss_pred cccccCCccchhhhccCCCC-ccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHH
Q 040814 529 RVVGTYGYMAPEYAMNGIVS-MKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENE 607 (664)
Q Consensus 529 ~~~Gt~~Y~APE~~~~~~~s-~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 607 (664)
..+|+..|-|||++.+..|+ +++||||+|||||.|++|+.||+..++.+.+.+ ++|.. -..|...
T Consensus 177 TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTm------------ImDCK--YtvPshv 242 (864)
T KOG4717|consen 177 TSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTM------------IMDCK--YTVPSHV 242 (864)
T ss_pred cccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhh------------hhccc--ccCchhh
Confidence 46899999999999998887 688999999999999999999987666555433 33332 2457778
Q ss_pred HHHHHHHHHhcccccCCCCCCHHHHHHH--Hhccc
Q 040814 608 LLRCIHAGLLCVHDQAVNRPTMADVVSC--LRQNN 640 (664)
Q Consensus 608 ~~~l~~l~~~Cl~~dP~~RPt~~evl~~--L~~~~ 640 (664)
..+|.+++..+|..||.+|.+.++|+.. |+...
T Consensus 243 S~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D 277 (864)
T KOG4717|consen 243 SKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGD 277 (864)
T ss_pred hHHHHHHHHHHHhcCchhhccHHHHhccccccCCC
Confidence 8889999999999999999999999853 44444
No 289
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.92 E-value=3.2e-25 Score=236.25 Aligned_cols=214 Identities=20% Similarity=0.240 Sum_probs=155.0
Q ss_pred HHhcCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc------------------------ceEEEEeEeecC-----
Q 040814 416 AATNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG------------------------RTIRLMGCSLHG----- 465 (664)
Q Consensus 416 ~~t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~------------------------~~v~l~g~~~~~----- 465 (664)
...++|+..+.||+|+||.||+|... +++.||||++.. +++++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 34578999999999999999999974 588999998753 246677665432
Q ss_pred -CeeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-----------------
Q 040814 466 -AERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT----------------- 527 (664)
Q Consensus 466 -~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~----------------- 527 (664)
...++++|++ +++|..++ +...+++..+..|+.||+.||.|||+.+++|+|+++.|.
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~ 166 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIV----KCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLAR 166 (343)
T ss_pred cCcEEEEeecC-CCCHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccce
Confidence 4578999998 77898877 345799999999999999999999999999999999871
Q ss_pred ------ccccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhh---
Q 040814 528 ------NRVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEA--- 597 (664)
Q Consensus 528 ------~~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~--- 597 (664)
....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+....+...... ...+....
T Consensus 167 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 245 (343)
T cd07878 167 QADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGT-PSPEVLKKISS 245 (343)
T ss_pred ecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCC-CCHHHHHhcch
Confidence 12357899999999977 56899999999999999999999998654322111111000000 00000000
Q ss_pred -----hhC--CCCCH--------HHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 598 -----ALD--GPCPE--------NELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 598 -----~~~--~~~~~--------~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
... ...+. .....+.+++.+|++.||++|||+.|+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 246 EHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred hhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000 00011 112246788899999999999999999854
No 290
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.92 E-value=1.1e-25 Score=239.93 Aligned_cols=199 Identities=25% Similarity=0.282 Sum_probs=162.6
Q ss_pred cccceeccCCCcCEEEEEEcC--C--cEEEEEeccc-----------------------ceEEEEeEeecCCeeEEEEec
Q 040814 422 STTNKLGEGGFGPVYKGKLLD--G--QVIAVKRLSG-----------------------RTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 422 ~~~~~lg~G~fg~Vy~~~~~~--~--~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV~Ey 474 (664)
...++||+|.||.|++|.+.. | ..||||.+.. ++|+|+|...+ ....||+|.
T Consensus 113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~EL 191 (1039)
T KOG0199|consen 113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFEL 191 (1039)
T ss_pred HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhh
Confidence 345899999999999999854 4 3689998853 37999999988 778999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc--------------------------
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN-------------------------- 528 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~-------------------------- 528 (664)
++.|||.+.|++ .....|-......++.|||.||.||..++.+|+|+...|..
T Consensus 192 aplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yv 270 (1039)
T KOG0199|consen 192 APLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYV 270 (1039)
T ss_pred cccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCCCcceE
Confidence 999999999976 45678889999999999999999999999999987766610
Q ss_pred ---cccccCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCC
Q 040814 529 ---RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCP 604 (664)
Q Consensus 529 ---~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 604 (664)
...-.+.|+|||.+....|+.++|||+|||+||||+| |+.|+.+....+ +.+.+|..-.-+-+
T Consensus 271 m~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~q-------------IL~~iD~~erLpRP 337 (1039)
T KOG0199|consen 271 MAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQ-------------ILKNIDAGERLPRP 337 (1039)
T ss_pred ecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHH-------------HHHhccccccCCCC
Confidence 0112346999999999999999999999999999999 777875443322 22334443344567
Q ss_pred HHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 605 ENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 605 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
..+.+++.+++..||..+|++|||+..|.+.
T Consensus 338 k~csedIY~imk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 338 KYCSEDIYQIMKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred CCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence 7889999999999999999999999999744
No 291
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.92 E-value=1.7e-24 Score=228.03 Aligned_cols=150 Identities=26% Similarity=0.382 Sum_probs=121.8
Q ss_pred cceeccCCCcCEEEEEEc---CCcEEEEEeccc--------------------ceEEEEeEeec--CCeeEEEEeccCCC
Q 040814 424 TNKLGEGGFGPVYKGKLL---DGQVIAVKRLSG--------------------RTIRLMGCSLH--GAERILVYEFMPNK 478 (664)
Q Consensus 424 ~~~lg~G~fg~Vy~~~~~---~~~~vavK~~~~--------------------~~v~l~g~~~~--~~~~~lV~Ey~~~g 478 (664)
.++||+|+||.||+|+.+ +++.||+|.+.. +++++++.+.. +...++||||+.+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~- 84 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH- 84 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC-
Confidence 368999999999999864 367899998742 46888887754 4567899999965
Q ss_pred chhHHhhccc------ccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-------------------------
Q 040814 479 SLDFFIFDSV------KKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------------- 527 (664)
Q Consensus 479 sL~~~l~~~~------~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------------- 527 (664)
+|..++.... +...+++..+..|+.||+.||.|||+.+++|+|+++.|.
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~ 164 (317)
T cd07868 85 DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 164 (317)
T ss_pred CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCC
Confidence 7877764221 123589999999999999999999999999999988761
Q ss_pred --------ccccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 040814 528 --------NRVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYD 574 (664)
Q Consensus 528 --------~~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~ 574 (664)
....||+.|+|||++.+ ..++.++||||+||++|||++|++||....
T Consensus 165 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~ 220 (317)
T cd07868 165 PLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred CCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCc
Confidence 12356888999999986 458999999999999999999999996543
No 292
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.92 E-value=7.1e-25 Score=228.16 Aligned_cols=215 Identities=18% Similarity=0.210 Sum_probs=153.6
Q ss_pred cCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-------------------------ceEEEEeEeecCCe-----
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-------------------------RTIRLMGCSLHGAE----- 467 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-------------------------~~v~l~g~~~~~~~----- 467 (664)
++|+..+.||+|+||.||+|... +++.||+|+++. +++++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 46888999999999999999975 589999997642 35778888876655
Q ss_pred eEEEEeccCCCchhHHhhcccc--cCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-----c------------
Q 040814 468 RILVYEFMPNKSLDFFIFDSVK--KKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-----N------------ 528 (664)
Q Consensus 468 ~~lV~Ey~~~gsL~~~l~~~~~--~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-----~------------ 528 (664)
.++||||+++ +|.+++..... ...+++..+..++.||+.||.|||+.+++|+++++.|. .
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~ 159 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGR 159 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccce
Confidence 7999999986 78888854322 35689999999999999999999999999999888761 0
Q ss_pred ----------cccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCCh------
Q 040814 529 ----------RVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKA------ 591 (664)
Q Consensus 529 ----------~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~------ 591 (664)
...+++.|+|||++.+ ..++.++||||||+++|||++|+.||...........+.........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (295)
T cd07837 160 AFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGV 239 (295)
T ss_pred ecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcch
Confidence 0124567999999865 45799999999999999999999998654322111000000000000
Q ss_pred hHhhhhhhCC--------CCCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 592 SELMEAALDG--------PCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 592 ~~~~d~~~~~--------~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
....+..... .........+.+++.+||+.+|.+||++.|++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 240 SKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred hhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0000000000 000123455778889999999999999999875
No 293
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.92 E-value=1e-24 Score=226.73 Aligned_cols=199 Identities=20% Similarity=0.222 Sum_probs=159.2
Q ss_pred cCccccceeccCCCcCEEEEEEc-CCcEEEEEecc-------------------------cceEEEEeEeecCCeeEEEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLS-------------------------GRTIRLMGCSLHGAERILVY 472 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~-------------------------~~~v~l~g~~~~~~~~~lV~ 472 (664)
++|+..+.||+|+||.||++... +++.||+|++. ++++++++++.++...++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 47888999999999999999975 48999999874 23689999999999999999
Q ss_pred eccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-----------------------cc
Q 040814 473 EFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-----------------------NR 529 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-----------------------~~ 529 (664)
||+++++|.+++. +...+++..+..++.||+.||.|||+.+++|.|+++.|. ..
T Consensus 81 e~~~~~~L~~~~~---~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~ 157 (290)
T cd05580 81 EYVPGGELFSHLR---KSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYT 157 (290)
T ss_pred ecCCCCCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCC
Confidence 9999999999984 346799999999999999999999999999999888761 12
Q ss_pred ccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHH
Q 040814 530 VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELL 609 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 609 (664)
..|++.|+|||.+.+...+.++||||||+++|||++|+.||........ .. .+... ....+.....
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~---------~~~~~--~~~~~~~~~~ 223 (290)
T cd05580 158 LCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQI---YE---------KILEG--KVRFPSFFSP 223 (290)
T ss_pred CCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHH---HH---------HHhcC--CccCCccCCH
Confidence 3478889999999888899999999999999999999999864331110 00 01100 1122333345
Q ss_pred HHHHHHHhcccccCCCCC-----CHHHHHH
Q 040814 610 RCIHAGLLCVHDQAVNRP-----TMADVVS 634 (664)
Q Consensus 610 ~l~~l~~~Cl~~dP~~RP-----t~~evl~ 634 (664)
.+.+++.+||+.+|.+|| +++|+++
T Consensus 224 ~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 224 DAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred HHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 677888899999999999 6666653
No 294
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.92 E-value=1e-24 Score=225.72 Aligned_cols=212 Identities=18% Similarity=0.258 Sum_probs=156.9
Q ss_pred CccccceeccCCCcCEEEEEEc-CCcEEEEEeccc------------------------ceEEEEeEeecCCeeEEEEec
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG------------------------RTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~------------------------~~v~l~g~~~~~~~~~lV~Ey 474 (664)
+|++.+.||+|+||.||+|... +++.||+|++.. +++++++++..+...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4778899999999999999975 589999998852 258899999999999999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc---------------------------
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------- 527 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------- 527 (664)
+ +++|.+++... ...+++.++..++.||++||.|||+.+++|.|+++.|.
T Consensus 81 ~-~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~ 157 (286)
T cd07832 81 M-PSDLSEVLRDE--ERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLY 157 (286)
T ss_pred c-CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCcc
Confidence 9 99999998542 36799999999999999999999999999999887661
Q ss_pred ccccccCCccchhhhccC-CCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCCh------hHhhh--hh
Q 040814 528 NRVVGTYGYMAPEYAMNG-IVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKA------SELME--AA 598 (664)
Q Consensus 528 ~~~~Gt~~Y~APE~~~~~-~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~------~~~~d--~~ 598 (664)
....|+..|+|||.+.+. .++.++||||+||++|||++|++||...........+......... .++.+ ..
T Consensus 158 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (286)
T cd07832 158 SHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKI 237 (286)
T ss_pred ccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcc
Confidence 123467889999998654 4689999999999999999998777543322111111000000000 00000 00
Q ss_pred ---hCC-----CCCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 599 ---LDG-----PCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 599 ---~~~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
... ....+....+.+++.+||+.+|++|||++++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 238 TFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred cCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 000 001122367788899999999999999999986
No 295
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.92 E-value=1.5e-24 Score=228.25 Aligned_cols=148 Identities=27% Similarity=0.380 Sum_probs=120.4
Q ss_pred ceeccCCCcCEEEEEEcC---CcEEEEEeccc--------------------ceEEEEeEeec--CCeeEEEEeccCCCc
Q 040814 425 NKLGEGGFGPVYKGKLLD---GQVIAVKRLSG--------------------RTIRLMGCSLH--GAERILVYEFMPNKS 479 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~~---~~~vavK~~~~--------------------~~v~l~g~~~~--~~~~~lV~Ey~~~gs 479 (664)
.+||+|+||.||+|+..+ ++.||+|.++. +++++++++.. +...++|+||+++ +
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~-~ 85 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH-D 85 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC-c
Confidence 689999999999999753 57899998753 46888888753 4567899999975 6
Q ss_pred hhHHhhcc------cccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc-------------------------
Q 040814 480 LDFFIFDS------VKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN------------------------- 528 (664)
Q Consensus 480 L~~~l~~~------~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~------------------------- 528 (664)
|.+++... .....+++..+..|+.||+.||.|||+.+++|+|+++.|.-
T Consensus 86 l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~ 165 (317)
T cd07867 86 LWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSP 165 (317)
T ss_pred HHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCC
Confidence 76666321 11235889999999999999999999999999999887621
Q ss_pred --------cccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 040814 529 --------RVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCY 573 (664)
Q Consensus 529 --------~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~ 573 (664)
...||+.|+|||++.+ ..++.++|||||||++|||+||+.||...
T Consensus 166 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 166 LKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred cccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 1246788999999976 45899999999999999999999998654
No 296
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.92 E-value=1.2e-24 Score=225.67 Aligned_cols=199 Identities=20% Similarity=0.251 Sum_probs=156.1
Q ss_pred ccccceeccCCCcCEEEEEEc-CCcEEEEEecc----------------------cceEEEEeEeecCCeeEEEEeccCC
Q 040814 421 FSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLS----------------------GRTIRLMGCSLHGAERILVYEFMPN 477 (664)
Q Consensus 421 ~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~----------------------~~~v~l~g~~~~~~~~~lV~Ey~~~ 477 (664)
|...+.||+|++|.||++... +++.+|+|+++ ++++++++++..++..++|+||+++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~ 100 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG 100 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence 344579999999999999974 58899999773 2368999999999999999999999
Q ss_pred CchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------cccc
Q 040814 478 KSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NRVV 531 (664)
Q Consensus 478 gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~~~ 531 (664)
++|.+++.. ..+++..+..++.|++.||.|||+.+++|+++++.|. ....
T Consensus 101 ~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 176 (285)
T cd06648 101 GALTDIVTH----TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLV 176 (285)
T ss_pred CCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCccccccc
Confidence 999999843 5689999999999999999999999999999888771 1124
Q ss_pred ccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHH
Q 040814 532 GTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRC 611 (664)
Q Consensus 532 Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l 611 (664)
|+..|+|||.+.+..++.++|||||||++|||++|+.||...... ....... ... .+.. ..+......+
T Consensus 177 ~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~---~~~~~~~-~~~-----~~~~--~~~~~~~~~l 245 (285)
T cd06648 177 GTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPL---QAMKRIR-DNL-----PPKL--KNLHKVSPRL 245 (285)
T ss_pred CCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHH---HHHHHHH-hcC-----CCCC--cccccCCHHH
Confidence 778899999999888999999999999999999999998542211 1111100 000 0000 0111233567
Q ss_pred HHHHHhcccccCCCCCCHHHHHH
Q 040814 612 IHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 612 ~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
.+++.+||+.+|++|||+.++++
T Consensus 246 ~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 246 RSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred HHHHHHHcccChhhCcCHHHHcc
Confidence 88889999999999999999986
No 297
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.92 E-value=1.7e-24 Score=228.13 Aligned_cols=205 Identities=24% Similarity=0.321 Sum_probs=157.4
Q ss_pred ccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEEec
Q 040814 421 FSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 421 ~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~Ey 474 (664)
|+..+.||+|+||.||+++.. +++.||+|++.. +++++++++..+...++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 566789999999999999975 489999998742 368999999999999999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc----------------------ccccc
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT----------------------NRVVG 532 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~----------------------~~~~G 532 (664)
+++ +|.+++.. ....+++..+..++.||+.||.|||+.+++|+++++.|. ....|
T Consensus 107 ~~g-~l~~~~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 183 (317)
T cd06635 107 CLG-SASDLLEV--HKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVG 183 (317)
T ss_pred CCC-CHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCCcccccC
Confidence 975 77776643 245699999999999999999999999999999988771 12357
Q ss_pred cCCccchhhhc---cCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHH
Q 040814 533 TYGYMAPEYAM---NGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELL 609 (664)
Q Consensus 533 t~~Y~APE~~~---~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 609 (664)
+..|+|||++. .+.++.++|||||||++|||++|+.||........ ... +...............
T Consensus 184 ~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~---~~~---------~~~~~~~~~~~~~~~~ 251 (317)
T cd06635 184 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA---LYH---------IAQNESPTLQSNEWSD 251 (317)
T ss_pred CccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH---HHH---------HHhccCCCCCCccccH
Confidence 78899999984 45689999999999999999999999854321111 100 1110011111123344
Q ss_pred HHHHHHHhcccccCCCCCCHHHHHHHHhccc
Q 040814 610 RCIHAGLLCVHDQAVNRPTMADVVSCLRQNN 640 (664)
Q Consensus 610 ~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 640 (664)
.+.+++.+||+.+|.+||++.+|++.+-...
T Consensus 252 ~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 282 (317)
T cd06635 252 YFRNFVDSCLQKIPQDRPTSEELLKHMFVLR 282 (317)
T ss_pred HHHHHHHHHccCCcccCcCHHHHHhChhhhc
Confidence 5778888999999999999999998654433
No 298
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.92 E-value=1.6e-24 Score=223.71 Aligned_cols=210 Identities=19% Similarity=0.229 Sum_probs=154.1
Q ss_pred ccccceeccCCCcCEEEEEEc-CCcEEEEEeccc------------------------ceEEEEeEeecC--CeeEEEEe
Q 040814 421 FSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG------------------------RTIRLMGCSLHG--AERILVYE 473 (664)
Q Consensus 421 ~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~------------------------~~v~l~g~~~~~--~~~~lV~E 473 (664)
|++.++||+|+||.||+|... +++.||+|++++ +++++++++.++ +..++|+|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 566789999999999999975 589999998753 257888888877 78999999
Q ss_pred ccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc------------------------cc
Q 040814 474 FMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------------NR 529 (664)
Q Consensus 474 y~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------------~~ 529 (664)
|++ ++|.+++.. ....+++..+..++.||+.||.|||+.+++|+++++.|. ..
T Consensus 81 ~~~-~~l~~~l~~--~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~~~~kl~dfg~~~~~~~~~~~~~ 157 (282)
T cd07831 81 LMD-MNLYELIKG--RKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKDDILKLADFGSCRGIYSKPPYTE 157 (282)
T ss_pred cCC-ccHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcCCCeEEEecccccccccCCCcCC
Confidence 997 578777743 235799999999999999999999999999998887661 12
Q ss_pred ccccCCccchhhhc-cCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhh-----hCCCC
Q 040814 530 VVGTYGYMAPEYAM-NGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAA-----LDGPC 603 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~-~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-----~~~~~ 603 (664)
..++..|+|||.+. +..++.++|||||||++|||++|+.||...+..+.......... ....++.... .....
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 236 (282)
T cd07831 158 YISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLG-TPDAEVLKKFRKSRHMNYNF 236 (282)
T ss_pred CCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcC-CCCHHHHHhhcccccccccC
Confidence 24677899999875 45678999999999999999999999865433221111100000 0000000000 00000
Q ss_pred -----------CHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 604 -----------PENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 604 -----------~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
.......+.+++.+||+.+|++||+++++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 237 PSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred cccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 1123567889999999999999999999885
No 299
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.92 E-value=4.8e-25 Score=230.11 Aligned_cols=197 Identities=20% Similarity=0.264 Sum_probs=154.4
Q ss_pred cceeccCCCcCEEEEEEc-CCcEEEEEeccc----------------------ceEEEEeEeecCCeeEEEEeccCCCch
Q 040814 424 TNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG----------------------RTIRLMGCSLHGAERILVYEFMPNKSL 480 (664)
Q Consensus 424 ~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~----------------------~~v~l~g~~~~~~~~~lV~Ey~~~gsL 480 (664)
...||+|+||.||++... +++.||+|.+.. +++++++++..++..++|+||+++++|
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L 105 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGAL 105 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCH
Confidence 467999999999999875 589999998742 257888889889999999999999999
Q ss_pred hHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------ccccccC
Q 040814 481 DFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NRVVGTY 534 (664)
Q Consensus 481 ~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~~~Gt~ 534 (664)
..++. ...+++..+..++.|++.||.|||+.+++|+|+++.|. ....|+.
T Consensus 106 ~~~~~----~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~ 181 (297)
T cd06659 106 TDIVS----QTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTP 181 (297)
T ss_pred HHHHh----hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecCc
Confidence 98873 35689999999999999999999999999999888771 1235788
Q ss_pred CccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHHHH
Q 040814 535 GYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRCIHA 614 (664)
Q Consensus 535 ~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l 614 (664)
.|+|||++.+..++.++|||||||++|||++|+.||......+... . ...... .. ..........+.++
T Consensus 182 ~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~---~-~~~~~~-----~~--~~~~~~~~~~l~~~ 250 (297)
T cd06659 182 YWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK---R-LRDSPP-----PK--LKNAHKISPVLRDF 250 (297)
T ss_pred cccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH---H-HhccCC-----CC--ccccCCCCHHHHHH
Confidence 9999999998899999999999999999999999986432211110 0 000000 00 00111223446778
Q ss_pred HHhcccccCCCCCCHHHHHHH
Q 040814 615 GLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 615 ~~~Cl~~dP~~RPt~~evl~~ 635 (664)
+.+||+.+|++||+++++++.
T Consensus 251 i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 251 LERMLTREPQERATAQELLDH 271 (297)
T ss_pred HHHHhcCCcccCcCHHHHhhC
Confidence 888999999999999999984
No 300
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.92 E-value=1.7e-24 Score=224.96 Aligned_cols=213 Identities=19% Similarity=0.265 Sum_probs=155.6
Q ss_pred cCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-----------------------ceEEEEeEeecCCeeEEEEec
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-----------------------RTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV~Ey 474 (664)
++|+..+.||+|++|.||+|..+ +++.||+|.+.. +++++++++..++..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 67888999999999999999975 589999998742 368899999999999999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------c
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------N 528 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~ 528 (664)
+++ +|.+++.+. ...+++.....++.||+.||.|||+.+++|+|+++.|. .
T Consensus 85 ~~~-~L~~~~~~~--~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 161 (291)
T cd07844 85 LDT-DLKQYMDDC--GGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYS 161 (291)
T ss_pred CCC-CHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCcccc
Confidence 985 899888542 34789999999999999999999999999999888661 0
Q ss_pred cccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCCC-CchhhhhhHHhcCC---hhHhh--------
Q 040814 529 RVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEE-RPLNLVGYLWKEGK---ASELM-------- 595 (664)
Q Consensus 529 ~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~-~~~~~~~~~~~~~~---~~~~~-------- 595 (664)
...++..|+|||.+.+ ..++.++|||||||++|||++|+.||...... +....+........ .....
T Consensus 162 ~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (291)
T cd07844 162 NEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPY 241 (291)
T ss_pred ccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccc
Confidence 1235678999999875 55899999999999999999999998643311 11111100000000 00000
Q ss_pred ------hhhhCCCC-CHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 596 ------EAALDGPC-PENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 596 ------d~~~~~~~-~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
...+.... .......+.+++.+|++.+|++|||+.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 242 SFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred cccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 00000000 0011255678889999999999999999875
No 301
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.92 E-value=1.1e-24 Score=226.65 Aligned_cols=213 Identities=18% Similarity=0.225 Sum_probs=156.5
Q ss_pred cCccccceeccCCCcCEEEEEEc-CCcEEEEEecc------------------------cceEEEEeEeecC--CeeEEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLS------------------------GRTIRLMGCSLHG--AERILV 471 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~------------------------~~~v~l~g~~~~~--~~~~lV 471 (664)
++|+..+.||+|+||.||+|..+ +++.+|+|.+. ++++++++++... ...++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 56888899999999999999986 48899999874 2368888888777 789999
Q ss_pred EeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc------------------------
Q 040814 472 YEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------------ 527 (664)
Q Consensus 472 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------------ 527 (664)
|||+++ +|.+++... ...+++..+..++.||+.||.|||+.+++|.|+++.|.
T Consensus 85 ~e~~~~-~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~ 161 (293)
T cd07843 85 MEYVEH-DLKSLMETM--KQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLK 161 (293)
T ss_pred ehhcCc-CHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCcc
Confidence 999984 898888532 34699999999999999999999999999999888761
Q ss_pred --ccccccCCccchhhhccC-CCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhc----------------
Q 040814 528 --NRVVGTYGYMAPEYAMNG-IVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKE---------------- 588 (664)
Q Consensus 528 --~~~~Gt~~Y~APE~~~~~-~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~---------------- 588 (664)
....+++.|+|||.+.+. .++.++||||||+++|||++|+.||...........+...+..
T Consensus 162 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (293)
T cd07843 162 PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAK 241 (293)
T ss_pred ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhc
Confidence 112356789999998764 4789999999999999999999998754332211111000000
Q ss_pred -CChhHhhhhhhCCCCCHH-HHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 589 -GKASELMEAALDGPCPEN-ELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 589 -~~~~~~~d~~~~~~~~~~-~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
..........+...++.. ....+.+++.+||+.+|++|||+.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 242 KKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred ccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 000000001111112211 2455778888999999999999999985
No 302
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.92 E-value=1.4e-24 Score=229.83 Aligned_cols=210 Identities=17% Similarity=0.221 Sum_probs=153.9
Q ss_pred ceeccC--CCcCEEEEEEc-CCcEEEEEeccc------------------------ceEEEEeEeecCCeeEEEEeccCC
Q 040814 425 NKLGEG--GFGPVYKGKLL-DGQVIAVKRLSG------------------------RTIRLMGCSLHGAERILVYEFMPN 477 (664)
Q Consensus 425 ~~lg~G--~fg~Vy~~~~~-~~~~vavK~~~~------------------------~~v~l~g~~~~~~~~~lV~Ey~~~ 477 (664)
..||+| +||+||++... +++.||+|++.. +++++++++..++..++|+||+++
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 456766 88999999974 599999998742 368999999999999999999999
Q ss_pred CchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccccc----------------------------
Q 040814 478 KSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTNR---------------------------- 529 (664)
Q Consensus 478 gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~~---------------------------- 529 (664)
++|.+++... ....+++..+..++.||+.||.|||+.+++|+|+++.|.-.
T Consensus 84 ~~l~~~l~~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (328)
T cd08226 84 GSANSLLKTY-FPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVY 162 (328)
T ss_pred CCHHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccc
Confidence 9999998543 23458999999999999999999999999999999988210
Q ss_pred -----ccccCCccchhhhccC--CCCccchHHHHHHHHHHHHhCCCCCCCCCCCCch-hhhhh----------------H
Q 040814 530 -----VVGTYGYMAPEYAMNG--IVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPL-NLVGY----------------L 585 (664)
Q Consensus 530 -----~~Gt~~Y~APE~~~~~--~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~-~~~~~----------------~ 585 (664)
..++..|||||++.+. .++.++|||||||++|||++|+.||......... ..... .
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (328)
T cd08226 163 DFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESR 242 (328)
T ss_pred cccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhh
Confidence 0123459999999763 4789999999999999999999998654321110 00000 0
Q ss_pred HhcC----------------ChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 586 WKEG----------------KASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 586 ~~~~----------------~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
+... ....+.+..+..+.+......+.+++.+||+.||++|||++|+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 243 MKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred hccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 0000 0000001111112223455678899999999999999999999743
No 303
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=99.92 E-value=1.1e-24 Score=219.45 Aligned_cols=216 Identities=21% Similarity=0.258 Sum_probs=162.3
Q ss_pred cCccccceeccCCCcCEEEEEEc-CCcEEEEEecc------------------------cc-eEEEEeEeecCC------
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLS------------------------GR-TIRLMGCSLHGA------ 466 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~------------------------~~-~v~l~g~~~~~~------ 466 (664)
..|...++||+|.||+||+|+.+ +|+.||+|++. .+ +|++++++...+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 34666788999999999999974 58999999884 23 799999998877
Q ss_pred eeEEEEeccCCCchhHHhhccccc-CCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc-------------------
Q 040814 467 ERILVYEFMPNKSLDFFIFDSVKK-KQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN------------------- 526 (664)
Q Consensus 467 ~~~lV~Ey~~~gsL~~~l~~~~~~-~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n------------------- 526 (664)
..+||+||++. +|..++...... ..++...+..++.||++||+|||+++++|+|++|.|
T Consensus 91 ~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra 169 (323)
T KOG0594|consen 91 KLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARA 169 (323)
T ss_pred eEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHH
Confidence 68899999965 899998543221 457778999999999999999999999999999998
Q ss_pred -------cccccccCCccchhhhccC-CCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhc---CChhHhh
Q 040814 527 -------TNRVVGTYGYMAPEYAMNG-IVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKE---GKASELM 595 (664)
Q Consensus 527 -------~~~~~Gt~~Y~APE~~~~~-~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~ 595 (664)
-...++|..|.|||++.+. .|+...||||+|||+.||++++.-|.+..+.+++..+...... ..+..+.
T Consensus 170 ~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~ 249 (323)
T KOG0594|consen 170 FSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVS 249 (323)
T ss_pred hcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCcc
Confidence 1234688899999999986 7999999999999999999999888877664443333221111 1111110
Q ss_pred ---hh--hhCC---CCC--H---HHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 596 ---EA--ALDG---PCP--E---NELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 596 ---d~--~~~~---~~~--~---~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
+- .... ..+ . .......+++.+|++.+|.+|.|++.++.+
T Consensus 250 ~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 250 SLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred ccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 00 0000 000 0 011367788999999999999999999876
No 304
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.92 E-value=2.7e-24 Score=218.22 Aligned_cols=201 Identities=22% Similarity=0.326 Sum_probs=160.3
Q ss_pred CccccceeccCCCcCEEEEEEc-CCcEEEEEeccc------------------------ceEEEEeEeecC--CeeEEEE
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG------------------------RTIRLMGCSLHG--AERILVY 472 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~------------------------~~v~l~g~~~~~--~~~~lV~ 472 (664)
+|+..+.||+|++|.||+|... +++.|++|++.. +++++++.+... ...++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4677899999999999999986 589999998742 368889998888 8899999
Q ss_pred eccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc--------------------------
Q 040814 473 EFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN-------------------------- 526 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n-------------------------- 526 (664)
||+++++|.+++.. ...+++..+..++.|+++||.|||+.+.+|.++++.|
T Consensus 81 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 157 (260)
T cd06606 81 EYVSGGSLSSLLKK---FGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG 157 (260)
T ss_pred EecCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccccccc
Confidence 99999999999953 3489999999999999999999999999999887765
Q ss_pred --cccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCC
Q 040814 527 --TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCP 604 (664)
Q Consensus 527 --~~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 604 (664)
.....++..|+|||.+.+...+.++||||||++++||++|+.||..... ..... + .+.........+
T Consensus 158 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~~~---~------~~~~~~~~~~~~ 226 (260)
T cd06606 158 EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN--PMAAL---Y------KIGSSGEPPEIP 226 (260)
T ss_pred ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc--hHHHH---H------hccccCCCcCCC
Confidence 0123467789999999988899999999999999999999999865441 11110 0 011111112233
Q ss_pred HHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 605 ENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 605 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
......+.+++.+|++.+|++||++.|+++
T Consensus 227 ~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 227 EHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred cccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 344567888889999999999999999985
No 305
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.92 E-value=1.2e-24 Score=225.14 Aligned_cols=212 Identities=17% Similarity=0.195 Sum_probs=153.0
Q ss_pred CccccceeccCCCcCEEEEEEc-CCcEEEEEeccc------------------------ceEEEEeEeecCCeeEEEEec
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG------------------------RTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~------------------------~~v~l~g~~~~~~~~~lV~Ey 474 (664)
+|+..+.||+|+||.||+|... +|+.||+|++.. +++++++++.+....++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4777899999999999999985 489999998742 357888888888899999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------c
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------N 528 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~ 528 (664)
+++ +|..++.. ....+++..+..++.||++||.|||+.+++|+|+++.|. .
T Consensus 81 ~~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 157 (284)
T cd07839 81 CDQ-DLKKYFDS--CNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYS 157 (284)
T ss_pred CCC-CHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcC
Confidence 974 77777643 245699999999999999999999999999999887761 1
Q ss_pred cccccCCccchhhhccC-CCCccchHHHHHHHHHHHHhCCCCCCCCCCCC-chhhhhhHHhcCC------hhHhhhhhhC
Q 040814 529 RVVGTYGYMAPEYAMNG-IVSMKADVFSFGVLLLEIVSGRKNNNCYDEER-PLNLVGYLWKEGK------ASELMEAALD 600 (664)
Q Consensus 529 ~~~Gt~~Y~APE~~~~~-~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~-~~~~~~~~~~~~~------~~~~~d~~~~ 600 (664)
...++..|+|||++.+. .++.++|||||||++|||++|+.|+....... ....+........ ..+..+....
T Consensus 158 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd07839 158 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPY 237 (284)
T ss_pred CCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhccccccc
Confidence 12357789999998764 47999999999999999999999864332211 1110000000000 0000000000
Q ss_pred CC---------CCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 601 GP---------CPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 601 ~~---------~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
.. ........+.+++.+||+.||.+|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 238 PMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred CCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 00 01122356678889999999999999999875
No 306
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.92 E-value=2.8e-24 Score=223.43 Aligned_cols=213 Identities=20% Similarity=0.271 Sum_probs=155.5
Q ss_pred HhcCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-----------------------ceEEEEeEeecCCeeEEEE
Q 040814 417 ATNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-----------------------RTIRLMGCSLHGAERILVY 472 (664)
Q Consensus 417 ~t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV~ 472 (664)
++++|.+.+.||+|+||.||+|... +++.||+|++.. +++++.+++..++..++|+
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 4578999999999999999999874 588999998742 3688999999999999999
Q ss_pred eccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-------------------------
Q 040814 473 EFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------------- 527 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------------- 527 (664)
||++ ++|..++.. ....+++..+..++.||+.||.|||+.+++|.|+++.|.
T Consensus 83 e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~ 159 (291)
T cd07870 83 EYMH-TDLAQYMIQ--HPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQT 159 (291)
T ss_pred eccc-CCHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCC
Confidence 9996 677776643 234678899999999999999999999999999988771
Q ss_pred -ccccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhc-C-----------ChhH
Q 040814 528 -NRVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKE-G-----------KASE 593 (664)
Q Consensus 528 -~~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~-~-----------~~~~ 593 (664)
....+++.|+|||++.+ ..++.++|||||||++|||++|+.||...... ...+...+.. + ....
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (291)
T cd07870 160 YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDV--FEQLEKIWTVLGVPTEDTWPGVSKLPN 237 (291)
T ss_pred CCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhH--HHHHHHHHHHcCCCChhhhhhhhhccc
Confidence 11235778999999875 45889999999999999999999998654321 1111100000 0 0000
Q ss_pred hhhhhhCCCCC---------HHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 594 LMEAALDGPCP---------ENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 594 ~~d~~~~~~~~---------~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
..........+ ......+.+++.+|++.||++|||+.|++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 238 YKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred ccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 00000000000 011345667888999999999999999874
No 307
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.92 E-value=1.9e-25 Score=228.43 Aligned_cols=199 Identities=24% Similarity=0.295 Sum_probs=159.3
Q ss_pred HhcCccccceeccCCCcCEEEEEEcC-CcEEEEEecccc-------------------------eEEEEeEeecCCeeEE
Q 040814 417 ATNNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSGR-------------------------TIRLMGCSLHGAERIL 470 (664)
Q Consensus 417 ~t~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~~-------------------------~v~l~g~~~~~~~~~l 470 (664)
..+.|..-++||+||||.||-++.++ |+.+|+|++.+. +|.+--.+...+.++|
T Consensus 183 t~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LCl 262 (591)
T KOG0986|consen 183 TKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCL 262 (591)
T ss_pred cccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEE
Confidence 34667888999999999999999755 999999988642 4666666777899999
Q ss_pred EEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc------------------------
Q 040814 471 VYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN------------------------ 526 (664)
Q Consensus 471 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n------------------------ 526 (664)
|+..|.||+|..+|++.. ...+++..++.++.+|+.||++||+..++-+|.+|+|
T Consensus 263 VLtlMNGGDLkfHiyn~g-~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~ 341 (591)
T KOG0986|consen 263 VLTLMNGGDLKFHIYNHG-NPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGK 341 (591)
T ss_pred EEEeecCCceeEEeeccC-CCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCCCC
Confidence 999999999999997643 3579999999999999999999999999999999998
Q ss_pred -cccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhh-C--CC
Q 040814 527 -TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAAL-D--GP 602 (664)
Q Consensus 527 -~~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~--~~ 602 (664)
....+||.||||||++.++.|+...|.||+||+||||+.|+.||........ .+-+|... . ..
T Consensus 342 ~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk-------------~eEvdrr~~~~~~e 408 (591)
T KOG0986|consen 342 PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVK-------------REEVDRRTLEDPEE 408 (591)
T ss_pred ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhh-------------HHHHHHHHhcchhh
Confidence 2234899999999999999999999999999999999999999965432211 11122221 1 23
Q ss_pred CCHHHHHHHHHHHHhcccccCCCCCCH
Q 040814 603 CPENELLRCIHAGLLCVHDQAVNRPTM 629 (664)
Q Consensus 603 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~ 629 (664)
++....+++..+....|+.||++|.-.
T Consensus 409 y~~kFS~eakslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 409 YSDKFSEEAKSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred cccccCHHHHHHHHHHHccCHHHhccC
Confidence 444445556666666899999999654
No 308
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.92 E-value=2.6e-24 Score=222.69 Aligned_cols=212 Identities=18% Similarity=0.234 Sum_probs=156.2
Q ss_pred ccccceeccCCCcCEEEEEEcC-CcEEEEEecc---------------------------cceEEEEeEeecCCe-----
Q 040814 421 FSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLS---------------------------GRTIRLMGCSLHGAE----- 467 (664)
Q Consensus 421 ~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~---------------------------~~~v~l~g~~~~~~~----- 467 (664)
|++.+.||+|+||.||+|..+. ++.+|+|++. ++++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 5677899999999999999865 8999999884 135788999887766
Q ss_pred eEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------
Q 040814 468 RILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-------------------- 527 (664)
Q Consensus 468 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-------------------- 527 (664)
.+++|||+++ +|.+++... ....+++..+..++.||++||.|||+.+.+|.++++.|.
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~-~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~ 158 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKC-PKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYS 158 (287)
T ss_pred eEEEehhccc-CHHHHHHHc-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceecc
Confidence 8999999975 888888532 224699999999999999999999999999998888771
Q ss_pred -----ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCCh----------h
Q 040814 528 -----NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKA----------S 592 (664)
Q Consensus 528 -----~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~----------~ 592 (664)
....++..|+|||++.+..++.++|||||||++|||++|+.||......+....+......... .
T Consensus 159 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T cd07838 159 FEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPR 238 (287)
T ss_pred CCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccch
Confidence 1223677899999999999999999999999999999999998654432211111000000000 0
Q ss_pred HhhhhhhCC---CCCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 593 ELMEAALDG---PCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 593 ~~~d~~~~~---~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
......... .........+.+++.+||+.||++||++.|++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 239 SSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred hhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 000000000 011123456778899999999999999999874
No 309
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.92 E-value=2.2e-24 Score=224.85 Aligned_cols=209 Identities=15% Similarity=0.154 Sum_probs=148.1
Q ss_pred hcCccccceeccCCCcCEEEEEEcC----CcEEEEEecc---------------------------------cceEEEEe
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLLD----GQVIAVKRLS---------------------------------GRTIRLMG 460 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~~----~~~vavK~~~---------------------------------~~~v~l~g 460 (664)
.++|++.++||+|+||.||+|...+ +..+|+|+.. .+++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 3679999999999999999999754 3566666432 12456666
Q ss_pred EeecCC----eeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc---------
Q 040814 461 CSLHGA----ERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------- 527 (664)
Q Consensus 461 ~~~~~~----~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------- 527 (664)
++.... ..++++|++.. ++.+.+. .....++..+..|+.|+++||.|||+.+++|+|+++.|.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~ 166 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLVE-NTKEIFK---RIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGY 166 (294)
T ss_pred eeeEecCCceEEEEEEehhcc-CHHHHHH---hhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEE
Confidence 554432 34677887643 5555552 223467888999999999999999999999999998871
Q ss_pred ------------------------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhh
Q 040814 528 ------------------------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVG 583 (664)
Q Consensus 528 ------------------------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~ 583 (664)
....||+.|+|||+..+..++.++|||||||++|||++|+.||......... +.
T Consensus 167 l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~--~~ 244 (294)
T PHA02882 167 IIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNL--IH 244 (294)
T ss_pred EEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHH--HH
Confidence 1135899999999999999999999999999999999999999765322211 10
Q ss_pred hHHhcCChhHhhhhhhCCC-CCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHh
Q 040814 584 YLWKEGKASELMEAALDGP-CPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLR 637 (664)
Q Consensus 584 ~~~~~~~~~~~~d~~~~~~-~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~ 637 (664)
.. . .+......... ........+.+++..||+.+|++||++.++++.|+
T Consensus 245 ~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 245 AA-K----CDFIKRLHEGKIKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred Hh-H----HHHHHHhhhhhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 00 0 01111111110 01122355777778899999999999999998763
No 310
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.92 E-value=2e-24 Score=223.52 Aligned_cols=211 Identities=22% Similarity=0.281 Sum_probs=154.3
Q ss_pred CccccceeccCCCcCEEEEEEc-CCcEEEEEeccc------------------------ceEEEEeEeecCCeeEEEEec
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG------------------------RTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~------------------------~~v~l~g~~~~~~~~~lV~Ey 474 (664)
+|+..+.||+|++|.||+|... +++.||||++.. +++++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4788899999999999999975 489999997742 368899999999999999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------c
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------N 528 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~ 528 (664)
++ ++|..++... ....+++..+..++.||+.||+|||+.+++|.++++.|. .
T Consensus 81 ~~-~~l~~~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (284)
T cd07860 81 LH-QDLKKFMDAS-PLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT 158 (284)
T ss_pred cc-cCHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCccccc
Confidence 96 6888888542 345789999999999999999999999999998887761 1
Q ss_pred cccccCCccchhhhccCC-CCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhh--------h--h
Q 040814 529 RVVGTYGYMAPEYAMNGI-VSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELM--------E--A 597 (664)
Q Consensus 529 ~~~Gt~~Y~APE~~~~~~-~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--------d--~ 597 (664)
...++..|+|||.+.+.. ++.++|||||||++|||+||+.||......... ....-..+...... + .
T Consensus 159 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd07860 159 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL--FRIFRTLGTPDEVVWPGVTSLPDYKP 236 (284)
T ss_pred cccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH--HHHHHHhCCCChhhhhhhhHHHHHHh
Confidence 123567899999887644 689999999999999999999998644322111 00000000000000 0 0
Q ss_pred hhC---C----CCCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 598 ALD---G----PCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 598 ~~~---~----~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
... . .........+.+++.+||+.||++|||++++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 237 SFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred hcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 000 0 000112244678889999999999999999875
No 311
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.92 E-value=4.1e-24 Score=215.89 Aligned_cols=200 Identities=25% Similarity=0.340 Sum_probs=158.8
Q ss_pred CccccceeccCCCcCEEEEEEc-CCcEEEEEeccc----------------------ceEEEEeEeecCCeeEEEEeccC
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG----------------------RTIRLMGCSLHGAERILVYEFMP 476 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~----------------------~~v~l~g~~~~~~~~~lV~Ey~~ 476 (664)
+|+..+.||+|++|.||++... +++.+++|++.. +++++++++......++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 4677899999999999999985 588999998743 25789999999999999999999
Q ss_pred CCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-------------------------cccc
Q 040814 477 NKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-------------------------NRVV 531 (664)
Q Consensus 477 ~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-------------------------~~~~ 531 (664)
+++|.+++... ...+++..+..++.|++.||.|||+.+.+|.|+++.|. ....
T Consensus 81 ~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~ 158 (253)
T cd05122 81 GGSLKDLLKST--NQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMV 158 (253)
T ss_pred CCcHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccccccccee
Confidence 99999998532 25799999999999999999999999999999887661 2344
Q ss_pred ccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHH--HHH
Q 040814 532 GTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPEN--ELL 609 (664)
Q Consensus 532 Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--~~~ 609 (664)
++..|+|||.+.+..++.++||||||+++|||++|+.|+...+..... ... .. ......+.. ...
T Consensus 159 ~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~---~~~-~~---------~~~~~~~~~~~~~~ 225 (253)
T cd05122 159 GTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKAL---FKI-AT---------NGPPGLRNPEKWSD 225 (253)
T ss_pred cCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHH---HHH-Hh---------cCCCCcCcccccCH
Confidence 678899999999888999999999999999999999998643321111 000 00 000111111 145
Q ss_pred HHHHHHHhcccccCCCCCCHHHHHH
Q 040814 610 RCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 610 ~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
.+.+++.+||+.||++|||+.|+++
T Consensus 226 ~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 226 EFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred HHHHHHHHHccCChhhCCCHHHHhc
Confidence 6778888999999999999999875
No 312
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.92 E-value=9.2e-25 Score=222.69 Aligned_cols=200 Identities=21% Similarity=0.206 Sum_probs=158.2
Q ss_pred CccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEEe
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVYE 473 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~E 473 (664)
+|++.+.||+|+||.||++... +++.||+|.+.+ +++++++++..++..++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 5788899999999999999986 489999998852 24677778888889999999
Q ss_pred ccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-------------------------c
Q 040814 474 FMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-------------------------N 528 (664)
Q Consensus 474 y~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-------------------------~ 528 (664)
|+++++|..++.. ...+++..+..++.||++||.|||+.+.+|.++++.|. .
T Consensus 81 ~~~~~~L~~~l~~---~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~ 157 (258)
T cd05578 81 LLLGGDLRYHLSQ---KVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTT 157 (258)
T ss_pred CCCCCCHHHHHHh---cCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCcccc
Confidence 9999999999843 35899999999999999999999999999998887761 1
Q ss_pred cccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHH
Q 040814 529 RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENEL 608 (664)
Q Consensus 529 ~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 608 (664)
...|+..|+|||.+.+..++.++||||||+++|||++|+.|+............ ..... .....+....
T Consensus 158 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~----------~~~~~-~~~~~~~~~~ 226 (258)
T cd05578 158 STSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIR----------AKQET-ADVLYPATWS 226 (258)
T ss_pred ccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHH----------HHhcc-ccccCcccCc
Confidence 244677899999999888999999999999999999999998754432111111 00000 1122333444
Q ss_pred HHHHHHHHhcccccCCCCCCH--HHHH
Q 040814 609 LRCIHAGLLCVHDQAVNRPTM--ADVV 633 (664)
Q Consensus 609 ~~l~~l~~~Cl~~dP~~RPt~--~evl 633 (664)
..+.+++.+||+.||.+||++ +|++
T Consensus 227 ~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 227 TEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred HHHHHHHHHHccCChhHcCCccHHHHh
Confidence 678888899999999999999 5543
No 313
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.92 E-value=9.6e-25 Score=225.63 Aligned_cols=212 Identities=24% Similarity=0.311 Sum_probs=154.6
Q ss_pred ccccceeccCCCcCEEEEEEcC-CcEEEEEeccc------------------------ceEEEEeEeecCCeeEEEEecc
Q 040814 421 FSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG------------------------RTIRLMGCSLHGAERILVYEFM 475 (664)
Q Consensus 421 ~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~------------------------~~v~l~g~~~~~~~~~lV~Ey~ 475 (664)
|++.+.||+|++|.||+|...+ ++.||||++.. +++++++++..++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 5667899999999999999864 88999998642 3567778888888999999999
Q ss_pred CCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-------------------------ccc
Q 040814 476 PNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-------------------------NRV 530 (664)
Q Consensus 476 ~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-------------------------~~~ 530 (664)
+|+|.+++... ....+++..+..++.|++.+|.|||+.+.+|.|+++.|. ...
T Consensus 81 -~~~l~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~ 158 (283)
T cd07830 81 -EGNLYQLMKDR-KGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDY 158 (283)
T ss_pred -CCCHHHHHHhc-ccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCC
Confidence 88998888542 134789999999999999999999999999999888771 123
Q ss_pred cccCCccchhhhc-cCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhH--------HhcCC-hhHhhhhhhC
Q 040814 531 VGTYGYMAPEYAM-NGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYL--------WKEGK-ASELMEAALD 600 (664)
Q Consensus 531 ~Gt~~Y~APE~~~-~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~--------~~~~~-~~~~~d~~~~ 600 (664)
.++..|+|||++. ...++.++||||||++++||++|+.||............... +.+.. .....+....
T Consensus 159 ~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd07830 159 VSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFP 238 (283)
T ss_pred CCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccccc
Confidence 4677899999885 456899999999999999999999998654332211111000 00000 0000000000
Q ss_pred C-------CCCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 601 G-------PCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 601 ~-------~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
. .........+.+++.+||+.+|++|||+.|++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 239 QFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred ccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 0 000111356889999999999999999999875
No 314
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.92 E-value=3.8e-26 Score=216.55 Aligned_cols=198 Identities=20% Similarity=0.222 Sum_probs=160.6
Q ss_pred hcCccccceeccCCCcCEEEEEE-cCCcEEEEEecc------------------------cceEEEEeEeecCCeeEEEE
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKL-LDGQVIAVKRLS------------------------GRTIRLMGCSLHGAERILVY 472 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~------------------------~~~v~l~g~~~~~~~~~lV~ 472 (664)
+++|++.+.||+|.|+.||++.. ++|+.+|+|.++ +++++|.....+....+||+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 46788889999999999999986 458888888763 34799999999999999999
Q ss_pred eccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc--------------------------
Q 040814 473 EFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN-------------------------- 526 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n-------------------------- 526 (664)
|+|.+++|..-|- .+..+++..+-..++||+.+|.|+|..+++|+|.+|.|
T Consensus 90 e~m~G~dl~~eIV---~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g 166 (355)
T KOG0033|consen 90 DLVTGGELFEDIV---AREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDG 166 (355)
T ss_pred ecccchHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCc
Confidence 9999999976552 44677888889999999999999999999999999987
Q ss_pred --cccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCC--
Q 040814 527 --TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGP-- 602 (664)
Q Consensus 527 --~~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-- 602 (664)
....+|||+|||||+++..+|+..+|||+.|||||-|+.|..||...+. ..+.+.++.+.
T Consensus 167 ~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~----------------~rlye~I~~g~yd 230 (355)
T KOG0033|consen 167 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ----------------HRLYEQIKAGAYD 230 (355)
T ss_pred cccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccH----------------HHHHHHHhccccC
Confidence 1235699999999999999999999999999999999999999864322 22222333221
Q ss_pred ----CCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 603 ----CPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 603 ----~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
.-....+...+++.++|..||.+|.|+.|.++
T Consensus 231 ~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 231 YPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred CCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 11233445667777899999999999998773
No 315
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.92 E-value=1.3e-24 Score=230.84 Aligned_cols=217 Identities=23% Similarity=0.261 Sum_probs=155.9
Q ss_pred hcCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-----------------------ceEEEEeEeecC-----Cee
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-----------------------RTIRLMGCSLHG-----AER 468 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-----------------------~~v~l~g~~~~~-----~~~ 468 (664)
+++|++.+.||+|+||.||+|... +++.||+|++.+ +++++++++... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 478999999999999999999874 589999998742 246677665443 357
Q ss_pred EEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc---------------------
Q 040814 469 ILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------- 527 (664)
Q Consensus 469 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------- 527 (664)
++|+||+++ +|..++ ....+++..+..++.|++.||.|||+.+++|+|+++.|.
T Consensus 84 ~lv~e~~~~-~l~~~~----~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~ 158 (336)
T cd07849 84 YIVQELMET-DLYKLI----KTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADP 158 (336)
T ss_pred EEEehhccc-CHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeeccc
Confidence 999999975 777776 345799999999999999999999999999999888761
Q ss_pred --------ccccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChh---Hhh
Q 040814 528 --------NRVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKAS---ELM 595 (664)
Q Consensus 528 --------~~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~ 595 (664)
....||..|+|||.+.+ ..++.++|||||||++|||++|+.||...+.......+.......... .+.
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (336)
T cd07849 159 EHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCII 238 (336)
T ss_pred cccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhh
Confidence 11356788999998764 568999999999999999999999986433221111111111111000 000
Q ss_pred hhh-------h--CCCCC-----HHHHHHHHHHHHhcccccCCCCCCHHHHHHH--Hhcc
Q 040814 596 EAA-------L--DGPCP-----ENELLRCIHAGLLCVHDQAVNRPTMADVVSC--LRQN 639 (664)
Q Consensus 596 d~~-------~--~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~--L~~~ 639 (664)
+.. . ....+ ......+.+++.+||+.+|++|||+.|+++. ++..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~ 298 (336)
T cd07849 239 SLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQY 298 (336)
T ss_pred chhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCcccccc
Confidence 000 0 00001 1123457889999999999999999999876 5544
No 316
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.92 E-value=1.6e-24 Score=224.74 Aligned_cols=206 Identities=22% Similarity=0.341 Sum_probs=153.3
Q ss_pred CccccceeccCCCcCEEEEEEcC-CcEEEEEeccc------------------------ceEEEEeEeecCCeeEEEEec
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG------------------------RTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~------------------------~~v~l~g~~~~~~~~~lV~Ey 474 (664)
+|...+.||+|+||.||++.... ++.+|+|++.. +++++++++..+...+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 45566899999999999999754 89999998742 368999999998999999999
Q ss_pred cCCCchhHH---hhcccccCCCCHHHHHHHHHHHHHHHHHhhhc-Cccccccccccc-----------------------
Q 040814 475 MPNKSLDFF---IFDSVKKKQLNWSKRITIIEGIAQGLIYLHKY-SRLRMNESKVNT----------------------- 527 (664)
Q Consensus 475 ~~~gsL~~~---l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~-~~~h~d~~~~n~----------------------- 527 (664)
+.. +|..+ +.. .....+++..+..++.|++.||+|||+. +++|+|+++.|.
T Consensus 85 ~~~-~l~~l~~~~~~-~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 162 (288)
T cd06616 85 MDI-SLDKFYKYVYE-VLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI 162 (288)
T ss_pred ccC-CHHHHHHHHHH-hhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCC
Confidence 874 54443 322 1236799999999999999999999975 899999888771
Q ss_pred --ccccccCCccchhhhccC---CCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCC
Q 040814 528 --NRVVGTYGYMAPEYAMNG---IVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGP 602 (664)
Q Consensus 528 --~~~~Gt~~Y~APE~~~~~---~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 602 (664)
....|+..|+|||.+.+. .++.++|||||||++|||++|+.||..... ....+.... .+. .+.+...
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~~~~-~~~-----~~~~~~~ 234 (288)
T cd06616 163 AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS--VFDQLTQVV-KGD-----PPILSNS 234 (288)
T ss_pred ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch--HHHHHhhhc-CCC-----CCcCCCc
Confidence 123467889999999865 689999999999999999999999864321 110000000 000 0111111
Q ss_pred CCHHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 603 CPENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 603 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
.+......+.+++.+||+.+|++|||+.+|++.
T Consensus 235 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 235 EEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred CCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 222345568888999999999999999999864
No 317
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.92 E-value=1.2e-24 Score=225.09 Aligned_cols=212 Identities=21% Similarity=0.261 Sum_probs=153.9
Q ss_pred ccccceeccCCCcCEEEEEEc-CCcEEEEEeccc------------------------ceEEEEeEeecCCeeEEEEecc
Q 040814 421 FSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG------------------------RTIRLMGCSLHGAERILVYEFM 475 (664)
Q Consensus 421 ~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~------------------------~~v~l~g~~~~~~~~~lV~Ey~ 475 (664)
|+..+.||+|++|.||+|... +|+.||+|++.. +++++++++..++..+++|||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 566789999999999999975 599999998742 3588899999999999999999
Q ss_pred CCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------cc
Q 040814 476 PNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NR 529 (664)
Q Consensus 476 ~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~ 529 (664)
+ ++|.+++... ....+++..+..++.||++||.|||+.+.+|.|+++.|. ..
T Consensus 81 ~-~~l~~~~~~~-~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 158 (283)
T cd07835 81 D-LDLKKYMDSS-PLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTH 158 (283)
T ss_pred C-cCHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCc
Confidence 5 6899988532 224689999999999999999999999999998887661 11
Q ss_pred ccccCCccchhhhccC-CCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchh-hhhhH-------Hhc-CChhHhhhhhh
Q 040814 530 VVGTYGYMAPEYAMNG-IVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLN-LVGYL-------WKE-GKASELMEAAL 599 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~~~-~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~-~~~~~-------~~~-~~~~~~~d~~~ 599 (664)
..++..|+|||++.+. .++.++|||||||++|||++|+.||.......... ..... +.. ....+......
T Consensus 159 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd07835 159 EVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFP 238 (283)
T ss_pred cccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcc
Confidence 2347789999988764 57999999999999999999999986443211110 00000 000 00000000000
Q ss_pred CC------CCCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 600 DG------PCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 600 ~~------~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
.. .........+.+++.+||+.+|++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 239 KWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred cccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 00 011122356778999999999999999999975
No 318
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.92 E-value=2.7e-24 Score=219.83 Aligned_cols=189 Identities=21% Similarity=0.238 Sum_probs=150.8
Q ss_pred eccCCCcCEEEEEEcC-CcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEEeccCCCch
Q 040814 427 LGEGGFGPVYKGKLLD-GQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVYEFMPNKSL 480 (664)
Q Consensus 427 lg~G~fg~Vy~~~~~~-~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~Ey~~~gsL 480 (664)
||.|+||.||++.... ++.+|+|++.+ +++++++.+.++...++|+||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 6899999999999854 89999998743 368899999999999999999999999
Q ss_pred hHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-------------------------ccccccCC
Q 040814 481 DFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-------------------------NRVVGTYG 535 (664)
Q Consensus 481 ~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-------------------------~~~~Gt~~ 535 (664)
.+++.. ...+++..+..++.||+.||.|||+.+.+|.++++.|. ....|+..
T Consensus 81 ~~~l~~---~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~ 157 (262)
T cd05572 81 WTILRD---RGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPE 157 (262)
T ss_pred HHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcC
Confidence 999943 35689999999999999999999999999998887761 11346788
Q ss_pred ccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHHHHH
Q 040814 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRCIHAG 615 (664)
Q Consensus 536 Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~ 615 (664)
|+|||.+.+..++.++|+||||+++|||++|+.||...... ...... .+.+.......+......+.+++
T Consensus 158 ~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~i 227 (262)
T cd05572 158 YVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDED-PMEIYN---------DILKGNGKLEFPNYIDKAAKDLI 227 (262)
T ss_pred ccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCC-HHHHHH---------HHhccCCCCCCCcccCHHHHHHH
Confidence 99999998888999999999999999999999998654321 111110 11111112233333456788999
Q ss_pred HhcccccCCCCCC
Q 040814 616 LLCVHDQAVNRPT 628 (664)
Q Consensus 616 ~~Cl~~dP~~RPt 628 (664)
.+||+.+|++||+
T Consensus 228 ~~~l~~~p~~R~~ 240 (262)
T cd05572 228 KQLLRRNPEERLG 240 (262)
T ss_pred HHHccCChhhCcC
Confidence 9999999999999
No 319
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.91 E-value=2.7e-24 Score=218.54 Aligned_cols=202 Identities=26% Similarity=0.291 Sum_probs=160.9
Q ss_pred CccccceeccCCCcCEEEEEEc-CCcEEEEEeccc------------------------ceEEEEeEeecCCeeEEEEec
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG------------------------RTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~------------------------~~v~l~g~~~~~~~~~lV~Ey 474 (664)
+|++.+.||+|+||.||++... +++.+|+|++.. +++++.+++.++...++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4778899999999999999864 588999998752 257778888888999999999
Q ss_pred cCCCchhHHhhccc-ccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc------------------------cc
Q 040814 475 MPNKSLDFFIFDSV-KKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------------NR 529 (664)
Q Consensus 475 ~~~gsL~~~l~~~~-~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------------~~ 529 (664)
+++++|..++.+.. ....+++..+..++.|++.||.|||+.+.+|.++++.|. ..
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~ 160 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKT 160 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccCCccc
Confidence 99999999985432 235789999999999999999999999999999888771 11
Q ss_pred ccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHH
Q 040814 530 VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELL 609 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 609 (664)
..++..|+|||.+.+..++.++|+||||+++|||++|+.||...+..+ +.. . +........+.....
T Consensus 161 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~---~~~-~---------~~~~~~~~~~~~~~~ 227 (256)
T cd08530 161 QIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD---LRY-K---------VQRGKYPPIPPIYSQ 227 (256)
T ss_pred ccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHH-H---------HhcCCCCCCchhhCH
Confidence 247789999999999999999999999999999999999986433211 000 0 111111122334556
Q ss_pred HHHHHHHhcccccCCCCCCHHHHHH
Q 040814 610 RCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 610 ~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
.+.+++.+||+.+|++||++.++++
T Consensus 228 ~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 228 DLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred HHHHHHHHHcCCCcccCCCHHHHhc
Confidence 7889999999999999999999985
No 320
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.91 E-value=2.1e-25 Score=224.98 Aligned_cols=192 Identities=23% Similarity=0.313 Sum_probs=158.4
Q ss_pred cCccccceeccCCCcCEEEEEEcC-CcEEEEEecccc--------------------------eEEEEeEeecCCeeEEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSGR--------------------------TIRLMGCSLHGAERILV 471 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~~--------------------------~v~l~g~~~~~~~~~lV 471 (664)
.+|.....||+|+||.|.++.-+. .+.+|||++++. ++++..++..-+.++.|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 467778999999999999998755 788999999874 24555667777889999
Q ss_pred EeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc-------------------------
Q 040814 472 YEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN------------------------- 526 (664)
Q Consensus 472 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n------------------------- 526 (664)
|||+.+|+|-.+|. +-+.+.+..+.-+|.+||-||-|||+.+++.+|++..|
T Consensus 429 MEyvnGGDLMyhiQ---Q~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~ 505 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQ---QVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGV 505 (683)
T ss_pred EEEecCchhhhHHH---HhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccccCCc
Confidence 99999999998883 56789999999999999999999999999999888776
Q ss_pred -cccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCH
Q 040814 527 -TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPE 605 (664)
Q Consensus 527 -~~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 605 (664)
+...+||+.|+|||++..++|+..+|.|||||+||||+.|++||++.++++... .+.+. ...+|.
T Consensus 506 TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~------------aI~eh--nvsyPK 571 (683)
T KOG0696|consen 506 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQ------------AIMEH--NVSYPK 571 (683)
T ss_pred ceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHH------------HHHHc--cCcCcc
Confidence 456789999999999999999999999999999999999999998766554332 12222 234555
Q ss_pred HHHHHHHHHHHhcccccCCCCC
Q 040814 606 NELLRCIHAGLLCVHDQAVNRP 627 (664)
Q Consensus 606 ~~~~~l~~l~~~Cl~~dP~~RP 627 (664)
....+.+.+...-+.+.|.+|.
T Consensus 572 slSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 572 SLSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred cccHHHHHHHHHHhhcCCcccc
Confidence 5666667776677888999994
No 321
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.91 E-value=5.2e-25 Score=216.04 Aligned_cols=202 Identities=24% Similarity=0.295 Sum_probs=159.2
Q ss_pred cceeccCCCcCEEEEE-EcCCcEEEEEecccc-----------------------eEEEEeEeecCCeeEEEEeccCCCc
Q 040814 424 TNKLGEGGFGPVYKGK-LLDGQVIAVKRLSGR-----------------------TIRLMGCSLHGAERILVYEFMPNKS 479 (664)
Q Consensus 424 ~~~lg~G~fg~Vy~~~-~~~~~~vavK~~~~~-----------------------~v~l~g~~~~~~~~~lV~Ey~~~gs 479 (664)
.+.||+|+|+.|--+. +.+|+.+|||++.++ +++|+.++.++...|||||-|.+|+
T Consensus 83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGp 162 (463)
T KOG0607|consen 83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGP 162 (463)
T ss_pred HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCch
Confidence 3789999999999887 467999999999753 6889999999999999999999999
Q ss_pred hhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc---------------------------------
Q 040814 480 LDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN--------------------------------- 526 (664)
Q Consensus 480 L~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n--------------------------------- 526 (664)
|..+|+ +++.+++.++.++..+||.||.|||.+|+.|+|.+|+|
T Consensus 163 lLshI~---~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spas 239 (463)
T KOG0607|consen 163 LLSHIQ---KRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPAS 239 (463)
T ss_pred HHHHHH---HhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCC
Confidence 999995 56789999999999999999999999999999999998
Q ss_pred ---cccccccCCccchhhhc-----cCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCCh-----hH
Q 040814 527 ---TNRVVGTYGYMAPEYAM-----NGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKA-----SE 593 (664)
Q Consensus 527 ---~~~~~Gt~~Y~APE~~~-----~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~-----~~ 593 (664)
....+|+..|||||+.. ...|+.++|.||+|||||-|++|.+||.+..+.+-- |.+++. ..
T Consensus 240 tP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCG------WdrGe~Cr~CQ~~ 313 (463)
T KOG0607|consen 240 TPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCG------WDRGEVCRVCQNK 313 (463)
T ss_pred CccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCC------ccCCCccHHHHHH
Confidence 12235777899999874 245899999999999999999999999876553321 333332 22
Q ss_pred hhhhhhCC--CCCH----HHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 594 LMEAALDG--PCPE----NELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 594 ~~d~~~~~--~~~~----~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
+++.+..+ ++|. ....+..+++...+-.|+.+|.++.++++
T Consensus 314 LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 314 LFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred HHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 33333333 2333 22334445555567789999999999886
No 322
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.91 E-value=2.4e-25 Score=234.47 Aligned_cols=203 Identities=21% Similarity=0.303 Sum_probs=158.5
Q ss_pred cCccccceeccCCCcCEEEEEEcC-CcEEEEEecc----------------------cceEEEEeEeecCCeeEEEEecc
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLS----------------------GRTIRLMGCSLHGAERILVYEFM 475 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~----------------------~~~v~l~g~~~~~~~~~lV~Ey~ 475 (664)
+.|.++..||.|+||.||++..++ +-..|.|++. +.+|+|++.+..++.++++.|||
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC 111 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC 111 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence 456778999999999999998765 4445566664 23688888888899999999999
Q ss_pred CCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc--------------------------ccc
Q 040814 476 PNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN--------------------------TNR 529 (664)
Q Consensus 476 ~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n--------------------------~~~ 529 (664)
.||-.+..+.+ -...|++.++.-+++|++.||.|||+..++|+|++..| ...
T Consensus 112 ~GGAVDaimlE--L~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDs 189 (1187)
T KOG0579|consen 112 GGGAVDAIMLE--LGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDS 189 (1187)
T ss_pred CCchHhHHHHH--hccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchhHHhhhcc
Confidence 99999998864 35689999999999999999999999999999988877 234
Q ss_pred ccccCCccchhhhc-----cCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCC
Q 040814 530 VVGTYGYMAPEYAM-----NGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCP 604 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~-----~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 604 (664)
++||+.|||||+++ ..+|+.++||||||++|.||.-+.+|-...+....+ -. +.......+ --|
T Consensus 190 FIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVl---lK-iaKSePPTL-------lqP 258 (1187)
T KOG0579|consen 190 FIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVL---LK-IAKSEPPTL-------LQP 258 (1187)
T ss_pred ccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHH---HH-HhhcCCCcc-------cCc
Confidence 68999999999885 578999999999999999999999995432221111 00 001111111 123
Q ss_pred HHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 605 ENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 605 ~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
......+.++..+||.++|..||+++++++
T Consensus 259 S~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 259 SHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred chhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 455666778888899999999999999874
No 323
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.91 E-value=3.5e-24 Score=223.02 Aligned_cols=214 Identities=20% Similarity=0.195 Sum_probs=154.7
Q ss_pred cCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc------------------------ceEEEEeEeecCCeeEEEEe
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG------------------------RTIRLMGCSLHGAERILVYE 473 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~------------------------~~v~l~g~~~~~~~~~lV~E 473 (664)
++|+..+.||+|++|.||+|..+ +++.||+|++.. +++++++++..+...++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 57888999999999999999975 589999997742 36899999999999999999
Q ss_pred ccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------
Q 040814 474 FMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-------------------------- 527 (664)
Q Consensus 474 y~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-------------------------- 527 (664)
|++ ++|..++... ....+++.....++.||+.||.|||+.+++|+++++.|.
T Consensus 82 ~~~-~~l~~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~ 159 (294)
T PLN00009 82 YLD-LDLKKHMDSS-PDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRT 159 (294)
T ss_pred ccc-ccHHHHHHhC-CCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCccc
Confidence 996 5777777432 233468888899999999999999999999999888761
Q ss_pred -ccccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCC---------hhHhhh
Q 040814 528 -NRVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGK---------ASELME 596 (664)
Q Consensus 528 -~~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~---------~~~~~d 596 (664)
....+++.|+|||++.+ ..++.++|||||||++|||+||+.||......+............. ......
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (294)
T PLN00009 160 FTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKS 239 (294)
T ss_pred cccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhh
Confidence 01134678999999876 4579999999999999999999999865432211110000000000 000000
Q ss_pred h--hhCCC----CCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 597 A--ALDGP----CPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 597 ~--~~~~~----~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
. ..... ........+.+++.+|++.+|++||++.++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 240 AFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred hcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 00000 01122345778889999999999999999986
No 324
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.91 E-value=2.9e-24 Score=222.19 Aligned_cols=211 Identities=20% Similarity=0.246 Sum_probs=154.4
Q ss_pred ccccceeccCCCcCEEEEEEcC-CcEEEEEeccc------------------------ceEEEEeEeecC--CeeEEEEe
Q 040814 421 FSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG------------------------RTIRLMGCSLHG--AERILVYE 473 (664)
Q Consensus 421 ~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~------------------------~~v~l~g~~~~~--~~~~lV~E 473 (664)
|++.+.||+|+||.||+|...+ ++.+|+|++.. +++++++++... ...++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 5677899999999999999865 89999998853 257888888877 78999999
Q ss_pred ccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------
Q 040814 474 FMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-------------------------- 527 (664)
Q Consensus 474 y~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-------------------------- 527 (664)
|+++ +|..++... ...+++..+..++.||++||.|||+.+.+|.++++.|.
T Consensus 81 ~~~~-~l~~~~~~~--~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~ 157 (287)
T cd07840 81 YMDH-DLTGLLDSP--EVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSAD 157 (287)
T ss_pred cccc-cHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCccc
Confidence 9985 888888432 25799999999999999999999999999998887650
Q ss_pred -ccccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCC------hhHh-----
Q 040814 528 -NRVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGK------ASEL----- 594 (664)
Q Consensus 528 -~~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~------~~~~----- 594 (664)
....++..|+|||.+.+ ..++.++||||||+++|||++|+.||...........+........ ...+
T Consensus 158 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (287)
T cd07840 158 YTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFEN 237 (287)
T ss_pred ccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhh
Confidence 11245677999998765 4689999999999999999999999865443222111111000000 0000
Q ss_pred ------hhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 595 ------MEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 595 ------~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
....+.......+...+.+++.+||+.+|++||++.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 238 LKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred ccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0000000001112456888999999999999999999875
No 325
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.91 E-value=7.2e-24 Score=222.72 Aligned_cols=214 Identities=19% Similarity=0.236 Sum_probs=153.7
Q ss_pred CccccceeccCCCcCEEEEEEc---CCcEEEEEeccc-------------------------ceEEEEeEeecC--CeeE
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLL---DGQVIAVKRLSG-------------------------RTIRLMGCSLHG--AERI 469 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~---~~~~vavK~~~~-------------------------~~v~l~g~~~~~--~~~~ 469 (664)
+|++.+.||+|+||.||+|... +++.||+|.+.. +++++++++... ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4778899999999999999974 478999998864 257899999887 7899
Q ss_pred EEEeccCCCchhHHhhcccc--cCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------
Q 040814 470 LVYEFMPNKSLDFFIFDSVK--KKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-------------------- 527 (664)
Q Consensus 470 lV~Ey~~~gsL~~~l~~~~~--~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-------------------- 527 (664)
+||||+++ +|..++..... ...+++..+..|+.||+.||.|||+.+++|+|+++.|.
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 99999986 56666543222 23789999999999999999999999999998887651
Q ss_pred -------------ccccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhh------hhh---
Q 040814 528 -------------NRVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNL------VGY--- 584 (664)
Q Consensus 528 -------------~~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~------~~~--- 584 (664)
....++..|+|||.+.+ ..++.++|||||||++|||++|+.||........... +..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (316)
T cd07842 160 RLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFE 239 (316)
T ss_pred cccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHH
Confidence 01235677999998876 4589999999999999999999999875443320000 000
Q ss_pred HHhc------------CChhHhhhhhhCCCCC----H-------HHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 585 LWKE------------GKASELMEAALDGPCP----E-------NELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 585 ~~~~------------~~~~~~~d~~~~~~~~----~-------~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
.... .......+.......+ . ....++.+++.+||+.||++|||+.|+++
T Consensus 240 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 240 VLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0000 0000000000011111 0 22345788999999999999999999875
No 326
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.91 E-value=2.9e-24 Score=223.92 Aligned_cols=204 Identities=22% Similarity=0.341 Sum_probs=153.7
Q ss_pred cCccccceeccCCCcCEEEEEEcC-CcEEEEEeccc------------------------ceEEEEeEeecCCeeEEEEe
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG------------------------RTIRLMGCSLHGAERILVYE 473 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~------------------------~~v~l~g~~~~~~~~~lV~E 473 (664)
++|++.+.||+|+||.||+|..++ ++.||||++++ +++++++++..+...++|||
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 94 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME 94 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence 567888999999999999999865 89999998753 25778899999999999999
Q ss_pred ccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhh-cCccccccccccc-------------------------
Q 040814 474 FMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK-YSRLRMNESKVNT------------------------- 527 (664)
Q Consensus 474 y~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~-~~~~h~d~~~~n~------------------------- 527 (664)
|+++ +|..++.. ....+++..+..|+.||++||.|||+ .+++|+|+++.|.
T Consensus 95 ~~~~-~l~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~ 171 (296)
T cd06618 95 LMST-CLDKLLKR--IQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAK 171 (296)
T ss_pred ccCc-CHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCcc
Confidence 9864 67666633 23479999999999999999999997 5899998887661
Q ss_pred ccccccCCccchhhhccCC----CCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCC
Q 040814 528 NRVVGTYGYMAPEYAMNGI----VSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPC 603 (664)
Q Consensus 528 ~~~~Gt~~Y~APE~~~~~~----~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 603 (664)
....++..|+|||.+.+.. ++.++||||||+++|||++|+.||...... ........... . + ..+.
T Consensus 172 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~~~~~~~~-~-----~--~~~~ 241 (296)
T cd06618 172 TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE--FEVLTKILQEE-P-----P--SLPP 241 (296)
T ss_pred cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH--HHHHHHHhcCC-C-----C--CCCC
Confidence 1123567899999987543 889999999999999999999998542211 11111111100 0 0 0001
Q ss_pred CHHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 604 PENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 604 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
......++.+++.+||+.||++||++.++++.
T Consensus 242 ~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 242 NEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred CCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11234567888899999999999999999865
No 327
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.91 E-value=4.6e-24 Score=221.39 Aligned_cols=207 Identities=19% Similarity=0.243 Sum_probs=157.4
Q ss_pred CccccceeccCCCcCEEEEEE----cCCcEEEEEeccc---------------------------ceEEEEeEeecCCee
Q 040814 420 NFSTTNKLGEGGFGPVYKGKL----LDGQVIAVKRLSG---------------------------RTIRLMGCSLHGAER 468 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~----~~~~~vavK~~~~---------------------------~~v~l~g~~~~~~~~ 468 (664)
+|++.+.||+|++|.||++.. .+++.||||.+.+ +++++++.+..+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 477789999999999999985 2478899998742 145677777788889
Q ss_pred EEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc---------------------
Q 040814 469 ILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------- 527 (664)
Q Consensus 469 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------- 527 (664)
++||||+++|+|..++. ....+++..+..++.|+++||.|||+.+.+|+|+++.|.
T Consensus 81 ~lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 157 (288)
T cd05583 81 HLILDYVNGGELFTHLY---QREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLA 157 (288)
T ss_pred EEEEecCCCCcHHHHHh---hcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECcccccccc
Confidence 99999999999999984 345789999999999999999999999999998887661
Q ss_pred ------ccccccCCccchhhhccCC--CCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhh
Q 040814 528 ------NRVVGTYGYMAPEYAMNGI--VSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAAL 599 (664)
Q Consensus 528 ------~~~~Gt~~Y~APE~~~~~~--~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 599 (664)
....|+..|+|||.+.+.. .+.++||||||+++|||++|+.||...........+.. .....
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~--------~~~~~-- 227 (288)
T cd05583 158 EEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISR--------RILKS-- 227 (288)
T ss_pred ccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHH--------HHHcc--
Confidence 1124788999999987655 78999999999999999999999854322111110000 01100
Q ss_pred CCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhcc
Q 040814 600 DGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQN 639 (664)
Q Consensus 600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 639 (664)
....+......+.+++.+||+.+|++|||+.++.+.|+..
T Consensus 228 ~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 228 KPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred CCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 1122223334567888899999999999999988887654
No 328
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.91 E-value=8.3e-24 Score=221.52 Aligned_cols=214 Identities=19% Similarity=0.253 Sum_probs=153.2
Q ss_pred hcCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc------------------------ceEEEEeEeecCC------
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG------------------------RTIRLMGCSLHGA------ 466 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~------------------------~~v~l~g~~~~~~------ 466 (664)
.++|+..++||+|+||.||+|... +++.||||++.. ++++++++|...+
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 457899999999999999999975 489999997731 3578888876544
Q ss_pred --eeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-----------------
Q 040814 467 --ERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT----------------- 527 (664)
Q Consensus 467 --~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~----------------- 527 (664)
..++||||+.+ +|..++.. ....+++.++..++.||+.||.|||+.+.+|.|+++.|.
T Consensus 91 ~~~~~lv~e~~~~-~l~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 167 (310)
T cd07865 91 KGSFYLVFEFCEH-DLAGLLSN--KNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLAR 167 (310)
T ss_pred CceEEEEEcCCCc-CHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCcc
Confidence 34999999975 78777742 234789999999999999999999999999998887761
Q ss_pred -------------ccccccCCccchhhhccC-CCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhc-----
Q 040814 528 -------------NRVVGTYGYMAPEYAMNG-IVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKE----- 588 (664)
Q Consensus 528 -------------~~~~Gt~~Y~APE~~~~~-~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~----- 588 (664)
....++..|+|||.+.+. .++.++||||||+++|||++|+.||...........+......
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (310)
T cd07865 168 AFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEV 247 (310)
T ss_pred cccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Confidence 012356779999998764 4789999999999999999999998654433222222211110
Q ss_pred ---CChhHhhhhhh-CCCC---------CHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 589 ---GKASELMEAAL-DGPC---------PENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 589 ---~~~~~~~d~~~-~~~~---------~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
....+..+... .... +......+.+++.+||+.||++|||++|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 248 WPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred cccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 00000000000 0000 0011234668899999999999999999875
No 329
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.91 E-value=9.7e-24 Score=217.77 Aligned_cols=197 Identities=22% Similarity=0.290 Sum_probs=151.2
Q ss_pred eccCCCcCEEEEEEc-CCcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEEeccCCCch
Q 040814 427 LGEGGFGPVYKGKLL-DGQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVYEFMPNKSL 480 (664)
Q Consensus 427 lg~G~fg~Vy~~~~~-~~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~Ey~~~gsL 480 (664)
||+|+||.||++... +++.+|+|.+.+ +++++++.+...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999875 489999998742 257888888888999999999999999
Q ss_pred hHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-------------------------ccccccCC
Q 040814 481 DFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-------------------------NRVVGTYG 535 (664)
Q Consensus 481 ~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-------------------------~~~~Gt~~ 535 (664)
.+++... ....+++..+..++.|++.||.|||+.+.+|.|+++.|. ....++..
T Consensus 81 ~~~l~~~-~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 159 (277)
T cd05577 81 KYHIYNV-GEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPG 159 (277)
T ss_pred HHHHHHc-CcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCCC
Confidence 9999643 224789999999999999999999999999998887761 11245678
Q ss_pred ccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHHHHH
Q 040814 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRCIHAG 615 (664)
Q Consensus 536 Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~ 615 (664)
|+|||++.+..++.++|||||||++|||++|+.||...........+. +.. . ......+......+.+++
T Consensus 160 y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~----~~~----~--~~~~~~~~~~~~~~~~li 229 (277)
T cd05577 160 YMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELK----RRT----L--EMAVEYPDKFSPEAKDLC 229 (277)
T ss_pred cCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHH----hcc----c--cccccCCccCCHHHHHHH
Confidence 999999988889999999999999999999999986543211111110 000 0 001122223345677888
Q ss_pred HhcccccCCCCC-----CHHHHHH
Q 040814 616 LLCVHDQAVNRP-----TMADVVS 634 (664)
Q Consensus 616 ~~Cl~~dP~~RP-----t~~evl~ 634 (664)
.+||+.+|++|| ++.++++
T Consensus 230 ~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 230 EALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred HHHccCChhHccCCCcccHHHHHh
Confidence 899999999999 6666654
No 330
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.91 E-value=3.1e-24 Score=219.09 Aligned_cols=202 Identities=20% Similarity=0.244 Sum_probs=154.0
Q ss_pred CccccceeccCCCcCEEEEEEcC-CcEEEEEecc---------------------------cceEEEEeEeecCCeeEEE
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLS---------------------------GRTIRLMGCSLHGAERILV 471 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~---------------------------~~~v~l~g~~~~~~~~~lV 471 (664)
+|.+.+.||+|+||.||++.... +..+++|.++ ++++++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 47778999999999999998743 3444444432 1356777888888889999
Q ss_pred EeccCCCchhHHhhcc-cccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-----------------------
Q 040814 472 YEFMPNKSLDFFIFDS-VKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT----------------------- 527 (664)
Q Consensus 472 ~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~----------------------- 527 (664)
|||+++++|..++... .....+++..+..++.|+++||.|||+.+.+|.++++.|.
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~~~~~l~d~g~~~~~~~~~~ 160 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKNNLLKIGDFGVSRLLMGSCD 160 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeecCCEeecccCceeecCCCcc
Confidence 9999999999988642 2345799999999999999999999999999998887761
Q ss_pred --ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCH
Q 040814 528 --NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPE 605 (664)
Q Consensus 528 --~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 605 (664)
....|+..|+|||.+.+..++.++||||||+++|||++|..||..... ..... .... ......+.
T Consensus 161 ~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~---~~~~~---------~~~~-~~~~~~~~ 227 (260)
T cd08222 161 LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF---LSVVL---------RIVE-GPTPSLPE 227 (260)
T ss_pred cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH---HHHHH---------HHHc-CCCCCCcc
Confidence 123467789999999888899999999999999999999999853221 11110 0000 01112233
Q ss_pred HHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 606 NELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 606 ~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
.....+.+++.+||+.+|++||++.|+++
T Consensus 228 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 228 TYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred hhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 44567788899999999999999999985
No 331
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.91 E-value=5.1e-24 Score=221.85 Aligned_cols=193 Identities=20% Similarity=0.259 Sum_probs=152.4
Q ss_pred ceeccCCCcCEEEEEEc-CCcEEEEEeccc----------------------ceEEEEeEeecCCeeEEEEeccCCCchh
Q 040814 425 NKLGEGGFGPVYKGKLL-DGQVIAVKRLSG----------------------RTIRLMGCSLHGAERILVYEFMPNKSLD 481 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~----------------------~~v~l~g~~~~~~~~~lV~Ey~~~gsL~ 481 (664)
.+||+|+||.||++..+ +++.||||++.. +++++++++..++..++||||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 68999999999999874 589999998742 3688899999999999999999999999
Q ss_pred HHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------ccccccCC
Q 040814 482 FFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NRVVGTYG 535 (664)
Q Consensus 482 ~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~~~Gt~~ 535 (664)
+++. ...+++.....++.|++.||+|||+.+.+|.|+++.|. ....|+..
T Consensus 106 ~~~~----~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~ 181 (292)
T cd06657 106 DIVT----HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPY 181 (292)
T ss_pred HHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCcc
Confidence 8873 34689999999999999999999999999998887761 11346788
Q ss_pred ccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCC--CCHHHHHHHHH
Q 040814 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGP--CPENELLRCIH 613 (664)
Q Consensus 536 Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~~~~~l~~ 613 (664)
|+|||.+.+..++.++|||||||++|||++|+.||.......... .+....... ........+.+
T Consensus 182 y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~ 248 (292)
T cd06657 182 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK-------------MIRDNLPPKLKNLHKVSPSLKG 248 (292)
T ss_pred ccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-------------HHHhhCCcccCCcccCCHHHHH
Confidence 999999988889999999999999999999999986432211110 011111110 11122345667
Q ss_pred HHHhcccccCCCCCCHHHHHH
Q 040814 614 AGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 614 l~~~Cl~~dP~~RPt~~evl~ 634 (664)
++.+||+.+|.+||++.++++
T Consensus 249 li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 249 FLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred HHHHHHhCCcccCcCHHHHhc
Confidence 888899999999999999887
No 332
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.91 E-value=8.2e-24 Score=214.75 Aligned_cols=202 Identities=20% Similarity=0.280 Sum_probs=160.3
Q ss_pred CccccceeccCCCcCEEEEEEc-CCcEEEEEeccc------------------------ceEEEEeEeecCCeeEEEEec
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG------------------------RTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~------------------------~~v~l~g~~~~~~~~~lV~Ey 474 (664)
+|+..+.||+|+||.||++... +++.+|+|++.. +++++.+.+..+...++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4778899999999999999985 489999998852 247788888888999999999
Q ss_pred cCCCchhHHhhccc-ccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------
Q 040814 475 MPNKSLDFFIFDSV-KKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-------------------------- 527 (664)
Q Consensus 475 ~~~gsL~~~l~~~~-~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-------------------------- 527 (664)
+++++|.+++.... ....+++..+..++.+++.||.|||+.+.+|.|+++.|.
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~ 160 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLA 160 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCccee
Confidence 99999999986431 136799999999999999999999999999998887761
Q ss_pred ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHH
Q 040814 528 NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENE 607 (664)
Q Consensus 528 ~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 607 (664)
....|++.|+|||.+.+..++.++||||+|++++||++|+.|+...... ....... . ......+...
T Consensus 161 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~---~~~~~~~-~---------~~~~~~~~~~ 227 (258)
T cd08215 161 KTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLL---ELALKIL-K---------GQYPPIPSQY 227 (258)
T ss_pred cceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHH---HHHHHHh-c---------CCCCCCCCCC
Confidence 1134677899999999888999999999999999999999998543211 1111110 0 0011223334
Q ss_pred HHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 608 LLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 608 ~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
...+.+++.+||+.+|++|||+.++++
T Consensus 228 ~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 228 SSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 456788888999999999999999886
No 333
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.91 E-value=9.7e-24 Score=213.98 Aligned_cols=199 Identities=25% Similarity=0.374 Sum_probs=158.5
Q ss_pred CccccceeccCCCcCEEEEEEc-CCcEEEEEeccc------------------------ceEEEEeEeecCCeeEEEEec
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG------------------------RTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~------------------------~~v~l~g~~~~~~~~~lV~Ey 474 (664)
+|+..+.||+|++|.||++... +++.||+|.+.. +++++++++..++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4777899999999999999875 488999998743 257888888888999999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------c
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------N 528 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~ 528 (664)
+++++|.+++. ....+++..+..++.|++.||.|||+.+++|.|+++.|. .
T Consensus 81 ~~~~~L~~~~~---~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 157 (254)
T cd06627 81 AENGSLRQIIK---KFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDA 157 (254)
T ss_pred CCCCcHHHHHH---hccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccccc
Confidence 99999999984 336799999999999999999999999999999988761 1
Q ss_pred cccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHH
Q 040814 529 RVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENEL 608 (664)
Q Consensus 529 ~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 608 (664)
...++..|+|||...+..++.++||||+|+++|||++|+.|+....... .. +. .. .......+....
T Consensus 158 ~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~---~~---~~------~~-~~~~~~~~~~~~ 224 (254)
T cd06627 158 SVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMA---AL---FR------IV-QDDHPPLPEGIS 224 (254)
T ss_pred ccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHH---HH---HH------Hh-ccCCCCCCCCCC
Confidence 2346778999999988889999999999999999999999986432111 00 00 00 011112233334
Q ss_pred HHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 609 LRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 609 ~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
..+.+++.+||+.+|++|||+.+++.
T Consensus 225 ~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 225 PELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred HHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 56778889999999999999999874
No 334
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.91 E-value=7.9e-24 Score=221.04 Aligned_cols=215 Identities=20% Similarity=0.245 Sum_probs=154.6
Q ss_pred HHhcCccccceeccCCCcCEEEEEEcC-CcEEEEEeccc------------------------ceEEEEeEeecCC----
Q 040814 416 AATNNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG------------------------RTIRLMGCSLHGA---- 466 (664)
Q Consensus 416 ~~t~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~------------------------~~v~l~g~~~~~~---- 466 (664)
...++|++.+.||+|+||.||+|..+. ++.||+|+++. +++++++++....
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 456789999999999999999999854 89999998842 2578888876654
Q ss_pred ------eeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-------------
Q 040814 467 ------ERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------- 527 (664)
Q Consensus 467 ------~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------- 527 (664)
..++|+||+++ +|..++.. ....+++..+..|+.||+.||.|||+.+++|.++++.|.
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~df 160 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLES--GLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADF 160 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCcc
Confidence 78999999986 66666632 234799999999999999999999999999998887651
Q ss_pred --------------ccccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCCh-
Q 040814 528 --------------NRVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKA- 591 (664)
Q Consensus 528 --------------~~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~- 591 (664)
....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...........+.........
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (302)
T cd07864 161 GLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPA 240 (302)
T ss_pred cccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChh
Confidence 01134667999998865 45789999999999999999999998643322211111111110000
Q ss_pred --hHhhh--------------hhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 592 --SELME--------------AALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 592 --~~~~d--------------~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
..+.. ...... .......+.+++.+||+.+|.+||++.++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 241 VWPDVIKLPYFNTMKPKKQYRRRLREE-FSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred hcccccccccccccccccccccchhhh-cCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00000 000000 0112356778888999999999999999875
No 335
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.91 E-value=1e-23 Score=221.73 Aligned_cols=200 Identities=27% Similarity=0.331 Sum_probs=152.7
Q ss_pred ccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEEec
Q 040814 421 FSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 421 ~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~Ey 474 (664)
|...+.||+|+||.||+|+.. +++.||+|++.. +++++++++.++...++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 555678999999999999974 489999998742 258899999999999999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc----------------------ccccc
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT----------------------NRVVG 532 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~----------------------~~~~G 532 (664)
+. |+|.+++.. ....+++..+..++.||+.||.|||+.+++|.++++.|. ....|
T Consensus 103 ~~-~~l~~~l~~--~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~ 179 (313)
T cd06633 103 CL-GSASDLLEV--HKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVG 179 (313)
T ss_pred CC-CCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCCCCCccc
Confidence 96 577777642 245799999999999999999999999999999888761 22357
Q ss_pred cCCccchhhhc---cCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHH
Q 040814 533 TYGYMAPEYAM---NGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELL 609 (664)
Q Consensus 533 t~~Y~APE~~~---~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 609 (664)
+..|+|||++. ...++.++|||||||++|||++|+.|+......... ...... .. ..........
T Consensus 180 ~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~---~~~~~~-~~--------~~~~~~~~~~ 247 (313)
T cd06633 180 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL---YHIAQN-DS--------PTLQSNEWTD 247 (313)
T ss_pred cccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH---HHHHhc-CC--------CCCCccccCH
Confidence 78899999984 466899999999999999999999998643321111 110000 00 0001111223
Q ss_pred HHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 610 RCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 610 ~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
.+.+++.+||+.+|.+||++.++++.
T Consensus 248 ~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 248 SFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcC
Confidence 46778889999999999999999853
No 336
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.91 E-value=8.9e-24 Score=221.71 Aligned_cols=215 Identities=19% Similarity=0.257 Sum_probs=154.6
Q ss_pred hcCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc------------------------ceEEEEeEeecC--CeeEE
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG------------------------RTIRLMGCSLHG--AERIL 470 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~------------------------~~v~l~g~~~~~--~~~~l 470 (664)
.++|++.+.||+|+||.||+|... +|+.||+|+++. +++++++++... +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 467899999999999999999985 489999998742 257788887654 46899
Q ss_pred EEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-----------------------
Q 040814 471 VYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT----------------------- 527 (664)
Q Consensus 471 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~----------------------- 527 (664)
||||+++ +|.+++... ...+++..+..++.||++||.|||+.+.+|+|+++.|.
T Consensus 86 v~e~~~~-~l~~~l~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~ 162 (309)
T cd07845 86 VMEYCEQ-DLASLLDNM--PTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPA 162 (309)
T ss_pred EEecCCC-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCcc
Confidence 9999975 788887432 36799999999999999999999999999999888761
Q ss_pred ---ccccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCC--h-hHhh-----
Q 040814 528 ---NRVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGK--A-SELM----- 595 (664)
Q Consensus 528 ---~~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~--~-~~~~----- 595 (664)
....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...+..+....+........ . ....
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (309)
T cd07845 163 KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLV 242 (309)
T ss_pred CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhccccc
Confidence 11124567999999875 5689999999999999999999999875443322211111000000 0 0000
Q ss_pred hh-hhCC-CCC------HHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 596 EA-ALDG-PCP------ENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 596 d~-~~~~-~~~------~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
.. .... ... ......+.+++.+|++.||++|||+.|+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 243 GKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred ccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00 0000 000 0123456778889999999999999999863
No 337
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.91 E-value=7.7e-24 Score=226.61 Aligned_cols=213 Identities=19% Similarity=0.159 Sum_probs=155.8
Q ss_pred HhcCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc------------------------ceEEEEeEeecC------
Q 040814 417 ATNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG------------------------RTIRLMGCSLHG------ 465 (664)
Q Consensus 417 ~t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~------------------------~~v~l~g~~~~~------ 465 (664)
..++|+..+.||+|+||.||+|... +++.||+|++.+ +++++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 4578999999999999999999975 589999998742 257888877533
Q ss_pred CeeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc------------------
Q 040814 466 AERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------ 527 (664)
Q Consensus 466 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------ 527 (664)
...++||||+.+ +|.+.+.. .+++..+..++.|++.||+|||+.+++|+|+++.|.
T Consensus 94 ~~~~lv~e~~~~-~l~~~~~~-----~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 167 (353)
T cd07850 94 QDVYLVMELMDA-NLCQVIQM-----DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 167 (353)
T ss_pred CcEEEEEeccCC-CHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCcccee
Confidence 346999999964 88777732 289999999999999999999999999999988761
Q ss_pred -------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcC-----------
Q 040814 528 -------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEG----------- 589 (664)
Q Consensus 528 -------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~----------- 589 (664)
....++..|+|||.+.+..++.++|||||||++|||++|+.||...+.......+.......
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (353)
T cd07850 168 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPT 247 (353)
T ss_pred CCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhh
Confidence 12346788999999999999999999999999999999999986543211111000000000
Q ss_pred --------------ChhHhhhhhhC----CCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 590 --------------KASELMEAALD----GPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 590 --------------~~~~~~d~~~~----~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
...++...... ...+......+.+++.+||+.||++|||+.|+++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 248 VRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred hhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000000000 00011234567889999999999999999999854
No 338
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.91 E-value=1.3e-23 Score=215.20 Aligned_cols=200 Identities=23% Similarity=0.271 Sum_probs=155.1
Q ss_pred cCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc---------------------------ceEEEEeEeecC--Cee
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG---------------------------RTIRLMGCSLHG--AER 468 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~---------------------------~~v~l~g~~~~~--~~~ 468 (664)
.+|++.+.||+|+||.||+|... +++.||+|.+.. +++++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 47888999999999999999974 489999997631 257888887654 457
Q ss_pred EEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc---------------------
Q 040814 469 ILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------- 527 (664)
Q Consensus 469 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------- 527 (664)
++|+||+++++|.+++. +...+++.....++.||+.||.|||+.+.+|.++++.|.
T Consensus 82 ~~v~e~~~~~~L~~~~~---~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 158 (264)
T cd06653 82 SIFVEYMPGGSIKDQLK---AYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQT 158 (264)
T ss_pred EEEEEeCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcccccccccc
Confidence 89999999999999984 335689999999999999999999999999998877650
Q ss_pred --------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhh
Q 040814 528 --------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAAL 599 (664)
Q Consensus 528 --------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 599 (664)
....|+..|+|||++.+..++.++|||||||++|||++|+.||....... .+ .+......
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~---------~~~~~~~~ 226 (264)
T cd06653 159 ICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMA---AI---------FKIATQPT 226 (264)
T ss_pred ccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHH---HH---------HHHHcCCC
Confidence 11347788999999998889999999999999999999999985322111 00 11111111
Q ss_pred CCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 600 DGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
....+......+.+++.+||+ +|..||+..+++.
T Consensus 227 ~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 227 KPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred CCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 223344455667888888999 5799999998765
No 339
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.91 E-value=9.9e-24 Score=221.37 Aligned_cols=202 Identities=26% Similarity=0.329 Sum_probs=154.2
Q ss_pred CccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEEe
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVYE 473 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~E 473 (664)
.|+..+.||+|+||.||+|+.. +++.+|+|.+.. +++++.+++..+...++|||
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 3666789999999999999975 488999998742 25889999999999999999
Q ss_pred ccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc----------------------ccccc
Q 040814 474 FMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN----------------------TNRVV 531 (664)
Q Consensus 474 y~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n----------------------~~~~~ 531 (664)
|+. |+|.+++.. ....+++.++..++.|++.||.|||+.+.+|+|+++.| .....
T Consensus 96 ~~~-~~l~~~~~~--~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 172 (308)
T cd06634 96 YCL-GSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV 172 (308)
T ss_pred ccC-CCHHHHHHH--cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCccccc
Confidence 997 577777643 23568999999999999999999999999999998876 11234
Q ss_pred ccCCccchhhhc---cCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHH
Q 040814 532 GTYGYMAPEYAM---NGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENEL 608 (664)
Q Consensus 532 Gt~~Y~APE~~~---~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 608 (664)
|+..|+|||.+. ...++.++|||||||++|||++|+.|+.......... ...... ..........
T Consensus 173 ~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~----~~~~~~--------~~~~~~~~~~ 240 (308)
T cd06634 173 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY----HIAQNE--------SPALQSGHWS 240 (308)
T ss_pred CCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHH----HHhhcC--------CCCcCccccc
Confidence 788999999985 3568899999999999999999999975432211110 000000 0011112334
Q ss_pred HHHHHHHHhcccccCCCCCCHHHHHHHH
Q 040814 609 LRCIHAGLLCVHDQAVNRPTMADVVSCL 636 (664)
Q Consensus 609 ~~l~~l~~~Cl~~dP~~RPt~~evl~~L 636 (664)
..+.+++.+||+.+|++||++.++++..
T Consensus 241 ~~~~~li~~cl~~~P~~Rp~~~~ll~~~ 268 (308)
T cd06634 241 EYFRNFVDSCLQKIPQDRPTSEVLLKHR 268 (308)
T ss_pred HHHHHHHHHHhhCCcccCCCHHHHhhCc
Confidence 5577888899999999999999998764
No 340
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.91 E-value=2e-24 Score=217.58 Aligned_cols=198 Identities=20% Similarity=0.251 Sum_probs=164.5
Q ss_pred cCccccceeccCCCcCEEEEEE-cCCcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKL-LDGQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVY 472 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~ 472 (664)
.+|++.+.||+|.||.|-++.. ..|+.||||.+++ +++.++..+...+...|||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM 132 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence 4577789999999999999986 5699999998864 3789999999999999999
Q ss_pred eccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc-------------------------c
Q 040814 473 EFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN-------------------------T 527 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n-------------------------~ 527 (664)
||..+|.|.+|+. .++.|++.+...+++||..|+.|+|+++.+|+|++.+| .
T Consensus 133 EYaS~GeLYDYiS---er~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfL 209 (668)
T KOG0611|consen 133 EYASGGELYDYIS---ERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFL 209 (668)
T ss_pred EecCCccHHHHHH---HhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccccHH
Confidence 9999999999994 56789999999999999999999999999999988776 2
Q ss_pred ccccccCCccchhhhccCCCC-ccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCC-H
Q 040814 528 NRVVGTYGYMAPEYAMNGIVS-MKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCP-E 605 (664)
Q Consensus 528 ~~~~Gt~~Y~APE~~~~~~~s-~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~ 605 (664)
..++|++-|.+||++.+.+|. +.+|-||+||+||-|+.|..||++.+.. .++.++-.+.+. +
T Consensus 210 qTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk----------------~lvrQIs~GaYrEP 273 (668)
T KOG0611|consen 210 QTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHK----------------RLVRQISRGAYREP 273 (668)
T ss_pred HHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHH----------------HHHHHhhcccccCC
Confidence 456899999999999999885 8999999999999999999999764321 222223333221 2
Q ss_pred HHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 606 NELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 606 ~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
+.+....-++.|+|..+|++|.|+.+|...
T Consensus 274 ~~PSdA~gLIRwmLmVNP~RRATieDiAsH 303 (668)
T KOG0611|consen 274 ETPSDASGLIRWMLMVNPERRATIEDIASH 303 (668)
T ss_pred CCCchHHHHHHHHHhcCcccchhHHHHhhh
Confidence 233345567778999999999999999854
No 341
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.91 E-value=1.3e-23 Score=222.48 Aligned_cols=217 Identities=19% Similarity=0.246 Sum_probs=158.6
Q ss_pred HHHHhcCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc------------------------ceEEEEeEeec-CCe
Q 040814 414 IAAATNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG------------------------RTIRLMGCSLH-GAE 467 (664)
Q Consensus 414 i~~~t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~------------------------~~v~l~g~~~~-~~~ 467 (664)
+...+++|+..+.||+|+||.||++... +++.||||++.+ +++++.+++.. +..
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 84 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLED 84 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence 3456789999999999999999999875 589999997632 36888888765 567
Q ss_pred eEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------
Q 040814 468 RILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-------------------- 527 (664)
Q Consensus 468 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-------------------- 527 (664)
.++|+||+ +++|..++. ...+++.....++.|+++||.|||+.+++|+++++.|.
T Consensus 85 ~~lv~e~~-~~~L~~~~~----~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~ 159 (328)
T cd07856 85 IYFVTELL-GTDLHRLLT----SRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQD 159 (328)
T ss_pred EEEEeehh-ccCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccC
Confidence 89999998 468988873 34688899999999999999999999999998887761
Q ss_pred ---ccccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHH-----------hcCChh
Q 040814 528 ---NRVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLW-----------KEGKAS 592 (664)
Q Consensus 528 ---~~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~-----------~~~~~~ 592 (664)
....++..|+|||++.+ ..++.++|||||||++|||++|+.||...........+.... ......
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (328)
T cd07856 160 PQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTL 239 (328)
T ss_pred CCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhH
Confidence 11346778999999865 568999999999999999999999986543211111100000 000111
Q ss_pred Hhhhhh-hCCCCCH-----HHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 593 ELMEAA-LDGPCPE-----NELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 593 ~~~d~~-~~~~~~~-----~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
++.... .....+. .....+.+++.+||+.+|++|||+++++..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 240 RFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 111110 0111111 123567888999999999999999998764
No 342
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.91 E-value=6.4e-24 Score=225.71 Aligned_cols=214 Identities=19% Similarity=0.218 Sum_probs=155.5
Q ss_pred HhcCccccceeccCCCcCEEEEEEc-CCcEEEEEecc-------------------------cceEEEEeEeecC--Cee
Q 040814 417 ATNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLS-------------------------GRTIRLMGCSLHG--AER 468 (664)
Q Consensus 417 ~t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~-------------------------~~~v~l~g~~~~~--~~~ 468 (664)
..++|++.+.||+|+||.||+|... +++.+|+|++. ++++++++++... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 4567888999999999999999975 48899999763 2368888887643 468
Q ss_pred EEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc---------------------
Q 040814 469 ILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------- 527 (664)
Q Consensus 469 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------- 527 (664)
++||||++ ++|..++.. ..+++..+..++.||+.||.|||+.+++|+|+++.|.
T Consensus 85 ~lv~e~~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~ 159 (337)
T cd07852 85 YLVFEYME-TDLHAVIRA----NILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSE 159 (337)
T ss_pred EEEecccc-cCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhcccc
Confidence 99999997 599888832 3789999999999999999999999999998887760
Q ss_pred ----------ccccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHh---------
Q 040814 528 ----------NRVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWK--------- 587 (664)
Q Consensus 528 ----------~~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~--------- 587 (664)
....|+..|+|||.+.+ ..++.++||||||+++|||++|+.||......+....+.....
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (337)
T cd07852 160 LEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIES 239 (337)
T ss_pred ccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence 01246778999998865 5688999999999999999999999865432221111100000
Q ss_pred --cCChhHhhhhhhCCC------CCHHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 588 --EGKASELMEAALDGP------CPENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 588 --~~~~~~~~d~~~~~~------~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
......+++...... ........+.+++.+||+.+|++|||+.++++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 240 IKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 000011111000000 001124567888999999999999999999865
No 343
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.91 E-value=8e-24 Score=221.76 Aligned_cols=214 Identities=20% Similarity=0.254 Sum_probs=151.3
Q ss_pred hcCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc------------------------ceEEEEeEeecC-------
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG------------------------RTIRLMGCSLHG------- 465 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~------------------------~~v~l~g~~~~~------- 465 (664)
.++|++.++||+|+||.||+|... +++.+|||++.. +++++++++...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 578999999999999999999975 488999998732 256677665433
Q ss_pred -CeeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-----------------
Q 040814 466 -AERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT----------------- 527 (664)
Q Consensus 466 -~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~----------------- 527 (664)
...++|+||+.. +|...+.. ....+++..+..++.||++||.|||+.+++|+|+++.|.
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~--~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 163 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLEN--PSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLAR 163 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccch
Confidence 346899999975 67666643 245799999999999999999999999999999887651
Q ss_pred --------------------ccccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHH
Q 040814 528 --------------------NRVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLW 586 (664)
Q Consensus 528 --------------------~~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~ 586 (664)
....+++.|+|||.+.+ ..++.++|||||||++|||++|++||...........+....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~ 243 (311)
T cd07866 164 PYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLC 243 (311)
T ss_pred hccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 01234677999998865 458999999999999999999999986544322211111110
Q ss_pred hcCCh---------hHhhhhhhCCCCC-------HHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 587 KEGKA---------SELMEAALDGPCP-------ENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 587 ~~~~~---------~~~~d~~~~~~~~-------~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
..... ....+.......+ ......+.+++.+||+.+|++|||+.|++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 244 GTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred CCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 00000 0000000000000 112245778899999999999999999875
No 344
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.91 E-value=1.6e-25 Score=253.57 Aligned_cols=205 Identities=23% Similarity=0.325 Sum_probs=162.9
Q ss_pred HHhcCccccceeccCCCcCEEEEEEc-CCcEEEEEecc------------------------cceEEEEeEeecCCeeEE
Q 040814 416 AATNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLS------------------------GRTIRLMGCSLHGAERIL 470 (664)
Q Consensus 416 ~~t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~------------------------~~~v~l~g~~~~~~~~~l 470 (664)
..+-+++...+||.|.||.||-|... +|+..|+|-+. +++|+.+|.-.|.++.+|
T Consensus 1232 nV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~I 1311 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYI 1311 (1509)
T ss_pred cceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHH
Confidence 34556777889999999999999864 48999998663 457999999999999999
Q ss_pred EEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc------------------------
Q 040814 471 VYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN------------------------ 526 (664)
Q Consensus 471 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n------------------------ 526 (664)
.||||++|+|.+.+. .....++..-..+..|++.|+.|||++|++|+|+++.|
T Consensus 1312 FMEyC~~GsLa~ll~---~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~ 1388 (1509)
T KOG4645|consen 1312 FMEYCEGGSLASLLE---HGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNA 1388 (1509)
T ss_pred HHHHhccCcHHHHHH---hcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCch
Confidence 999999999999983 34557777777889999999999999999999999998
Q ss_pred ------cccccccCCccchhhhccCC---CCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhh
Q 040814 527 ------TNRVVGTYGYMAPEYAMNGI---VSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEA 597 (664)
Q Consensus 527 ------~~~~~Gt~~Y~APE~~~~~~---~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 597 (664)
.+..+||+.|||||++.+.. -.-+.||||+|||++||+||++|+...+..- .+-|....+
T Consensus 1389 ~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~---aIMy~V~~g-------- 1457 (1509)
T KOG4645|consen 1389 QTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEW---AIMYHVAAG-------- 1457 (1509)
T ss_pred hcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchh---HHHhHHhcc--------
Confidence 12357999999999997643 4578999999999999999999986544321 111111111
Q ss_pred hhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 598 ALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 598 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
-...+|.....+-.+++..|++.||++|.++.|+++.
T Consensus 1458 -h~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1458 -HKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred -CCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 1234555555666777888999999999999888764
No 345
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.91 E-value=1.4e-23 Score=217.93 Aligned_cols=200 Identities=20% Similarity=0.251 Sum_probs=153.6
Q ss_pred CccccceeccCCCcCEEEEEE----cCCcEEEEEeccc---------------------------ceEEEEeEeecCCee
Q 040814 420 NFSTTNKLGEGGFGPVYKGKL----LDGQVIAVKRLSG---------------------------RTIRLMGCSLHGAER 468 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~----~~~~~vavK~~~~---------------------------~~v~l~g~~~~~~~~ 468 (664)
+|++.+.||+|+||.||++.. .+|+.||+|++.. +++++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477789999999999999986 3689999998742 246777888888889
Q ss_pred EEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc---------------------
Q 040814 469 ILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------- 527 (664)
Q Consensus 469 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------- 527 (664)
++||||+++++|.+++. ....+++..+..++.||++||.|||+.+.+|+|+++.|.
T Consensus 81 ~lv~e~~~~~~L~~~l~---~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 157 (290)
T cd05613 81 HLILDYINGGELFTHLS---QRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHE 157 (290)
T ss_pred EEEEecCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceeccc
Confidence 99999999999999984 345789999999999999999999999999998887761
Q ss_pred ------ccccccCCccchhhhcc--CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhh
Q 040814 528 ------NRVVGTYGYMAPEYAMN--GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAAL 599 (664)
Q Consensus 528 ------~~~~Gt~~Y~APE~~~~--~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 599 (664)
....|+..|+|||.+.. ..++.++||||||+++|||++|+.|+......... .++.+...
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~------------~~~~~~~~ 225 (290)
T cd05613 158 DEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQ------------AEISRRIL 225 (290)
T ss_pred ccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccH------------HHHHHHhh
Confidence 12347788999999875 34788999999999999999999998643221111 11111111
Q ss_pred --CCCCCHHHHHHHHHHHHhcccccCCCCC-----CHHHHHH
Q 040814 600 --DGPCPENELLRCIHAGLLCVHDQAVNRP-----TMADVVS 634 (664)
Q Consensus 600 --~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~evl~ 634 (664)
..+.+......+.+++.+||+.+|++|| ++.+++.
T Consensus 226 ~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 226 KSEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred ccCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 1122333445677888899999999997 5666654
No 346
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.91 E-value=5.8e-24 Score=241.43 Aligned_cols=211 Identities=25% Similarity=0.362 Sum_probs=165.1
Q ss_pred HhcCccccceeccCCCcCEEEEEEcC--------CcEEEEEeccc------------------------ceEEEEeEeec
Q 040814 417 ATNNFSTTNKLGEGGFGPVYKGKLLD--------GQVIAVKRLSG------------------------RTIRLMGCSLH 464 (664)
Q Consensus 417 ~t~~~~~~~~lg~G~fg~Vy~~~~~~--------~~~vavK~~~~------------------------~~v~l~g~~~~ 464 (664)
..++..+.+.||+|.||.|++|.... ...||||.+.. +++.++|+|..
T Consensus 294 ~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~ 373 (609)
T KOG0200|consen 294 PRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQ 373 (609)
T ss_pred chhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeecc
Confidence 33444556799999999999998531 45799998853 47999999999
Q ss_pred CCeeEEEEeccCCCchhHHhhccc-----c------c--CCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc----
Q 040814 465 GAERILVYEFMPNKSLDFFIFDSV-----K------K--KQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT---- 527 (664)
Q Consensus 465 ~~~~~lV~Ey~~~gsL~~~l~~~~-----~------~--~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~---- 527 (664)
....++|+||++.|+|..||...+ . . ..|+....+.++.|||.|++||++...+|+|+...|.
T Consensus 374 ~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~ 453 (609)
T KOG0200|consen 374 DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITK 453 (609)
T ss_pred CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecC
Confidence 999999999999999999997543 0 0 2388999999999999999999999999997766550
Q ss_pred --------------------cc---ccc--cCCccchhhhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhh
Q 040814 528 --------------------NR---VVG--TYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNL 581 (664)
Q Consensus 528 --------------------~~---~~G--t~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~ 581 (664)
.. ..| ...|||||.+....|+.|+|||||||+||||+| |..|+....... .+
T Consensus 454 ~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~--~l 531 (609)
T KOG0200|consen 454 NKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTE--EL 531 (609)
T ss_pred CCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHH--HH
Confidence 11 111 245999999999999999999999999999999 777875311111 11
Q ss_pred hhhHHhcCChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhcc
Q 040814 582 VGYLWKEGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQN 639 (664)
Q Consensus 582 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~ 639 (664)
.+.+....+...|..+..++.+++..||+.+|++||++.++++.++..
T Consensus 532 ----------~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 532 ----------LEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred ----------HHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 122233333355667778888999999999999999999999999884
No 347
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.91 E-value=9.8e-24 Score=224.83 Aligned_cols=216 Identities=19% Similarity=0.227 Sum_probs=154.5
Q ss_pred hcCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc------------------------ceEEEEeEeecC------C
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG------------------------RTIRLMGCSLHG------A 466 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~------------------------~~v~l~g~~~~~------~ 466 (664)
.++|...+.||+|+||.||+|... +++.||||++.+ +++++++++... .
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 378999999999999999999974 589999998752 257777777643 3
Q ss_pred eeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-------------------
Q 040814 467 ERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------- 527 (664)
Q Consensus 467 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------- 527 (664)
+.++|+||+.. +|..++ ...+++..+..++.|+++||.|||+.+++|+|+++.|.
T Consensus 94 ~~~lv~e~~~~-~l~~~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~ 167 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIM-----GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHA 167 (342)
T ss_pred eEEEEeccccc-CHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCC
Confidence 46899999974 676654 24689999999999999999999999999999988761
Q ss_pred ----ccccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhh---
Q 040814 528 ----NRVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAAL--- 599 (664)
Q Consensus 528 ----~~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--- 599 (664)
....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...+.......+.... .....+..+...
T Consensus 168 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 246 (342)
T cd07879 168 DAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVT-GVPGPEFVQKLEDKA 246 (342)
T ss_pred CCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc-CCCCHHHHHHhcccc
Confidence 12346778999999876 468999999999999999999999997543221111100000 000000000000
Q ss_pred -------CCCCC--------HHHHHHHHHHHHhcccccCCCCCCHHHHHHH--Hhccc
Q 040814 600 -------DGPCP--------ENELLRCIHAGLLCVHDQAVNRPTMADVVSC--LRQNN 640 (664)
Q Consensus 600 -------~~~~~--------~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~--L~~~~ 640 (664)
....+ ......+.+++.+||+.||++||++++++.. ++...
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~ 304 (342)
T cd07879 247 AKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR 304 (342)
T ss_pred hHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence 00000 0123457788899999999999999999854 55443
No 348
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.91 E-value=5.1e-24 Score=219.48 Aligned_cols=199 Identities=20% Similarity=0.240 Sum_probs=157.9
Q ss_pred cCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc--------------------------ceEEEEeEeecCCeeEEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG--------------------------RTIRLMGCSLHGAERILV 471 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~--------------------------~~v~l~g~~~~~~~~~lV 471 (664)
++|...+.||+|+||.||++... +++.||+|++.+ +++++++++..++..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 47888999999999999999985 589999998753 245667777788899999
Q ss_pred EeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc------------------------
Q 040814 472 YEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------------ 527 (664)
Q Consensus 472 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------------ 527 (664)
|||+++++|.+++. +...+++..+..|+.|++.||.|||+.+.+|.|+++.|.
T Consensus 81 ~e~~~~~~L~~~l~---~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~ 157 (280)
T cd05581 81 LEYAPNGELLQYIR---KYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSS 157 (280)
T ss_pred EcCCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCccc
Confidence 99999999999994 345799999999999999999999999999998877651
Q ss_pred ----------------------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhH
Q 040814 528 ----------------------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYL 585 (664)
Q Consensus 528 ----------------------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~ 585 (664)
....++..|+|||++.+..++.++||||||++++|+++|+.|+.........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~------ 231 (280)
T cd05581 158 PESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTF------ 231 (280)
T ss_pred cccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHH------
Confidence 0123578899999999888999999999999999999999998644311110
Q ss_pred HhcCChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCH----HHHHH
Q 040814 586 WKEGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTM----ADVVS 634 (664)
Q Consensus 586 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~----~evl~ 634 (664)
.... ......+......+.+++.+||+.+|++||++ +++++
T Consensus 232 ------~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 232 ------QKIL--KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred ------HHHH--hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 0111 11122333345667888899999999999999 66653
No 349
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.90 E-value=5.8e-24 Score=226.11 Aligned_cols=218 Identities=20% Similarity=0.220 Sum_probs=157.5
Q ss_pred hcCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc------------------------ceEEEEeEeecC-----Ce
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG------------------------RTIRLMGCSLHG-----AE 467 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~------------------------~~v~l~g~~~~~-----~~ 467 (664)
.++|.+.+.||+|+||.||+|... +++.||||+++. +++++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 457899999999999999999974 489999998753 256777766543 34
Q ss_pred eEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------
Q 040814 468 RILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-------------------- 527 (664)
Q Consensus 468 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-------------------- 527 (664)
.++||||+. ++|.+++. ....+++..+..++.||+.||.|||+.+.+|+++++.|.
T Consensus 84 ~~lv~e~~~-~~L~~~~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~ 159 (337)
T cd07858 84 VYIVYELMD-TDLHQIIR---SSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTS 159 (337)
T ss_pred EEEEEeCCC-CCHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccC
Confidence 799999996 68888883 346799999999999999999999999999999888761
Q ss_pred ------ccccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhc-----------C
Q 040814 528 ------NRVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKE-----------G 589 (664)
Q Consensus 528 ------~~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~-----------~ 589 (664)
....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...+.......+...... .
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (337)
T cd07858 160 EKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNE 239 (337)
T ss_pred CCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCch
Confidence 11246778999999875 56899999999999999999999998654322111111111000 0
Q ss_pred ChhHhhhhhhCC------CCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHH--Hhcc
Q 040814 590 KASELMEAALDG------PCPENELLRCIHAGLLCVHDQAVNRPTMADVVSC--LRQN 639 (664)
Q Consensus 590 ~~~~~~d~~~~~------~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~--L~~~ 639 (664)
.....+...... .........+.+++.+||+.+|++|||++|+++. ++..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 240 KARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred hhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence 000001000000 0011234567889999999999999999999876 5544
No 350
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.90 E-value=6e-24 Score=225.67 Aligned_cols=214 Identities=16% Similarity=0.240 Sum_probs=155.7
Q ss_pred hcCccccceeccCCCcCEEEEEEc-CCcEEEEEecccc------------------------eEEEEeEee----cCCee
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSGR------------------------TIRLMGCSL----HGAER 468 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~------------------------~v~l~g~~~----~~~~~ 468 (664)
.++|++.+.||+|+||.||+|... +++.||+|++... ++++.+++. .....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 368899999999999999999975 4899999987531 355555554 23467
Q ss_pred EEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc---------------------
Q 040814 469 ILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------- 527 (664)
Q Consensus 469 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------- 527 (664)
++||||+. ++|.+++. ....+++..+..++.||++||.|||+.+++|+++++.|.
T Consensus 84 ~lv~e~~~-~~l~~~~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 159 (334)
T cd07855 84 YVVMDLME-SDLHHIIH---SDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSS 159 (334)
T ss_pred EEEEehhh-hhHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecc
Confidence 99999996 68988884 345699999999999999999999999999998887760
Q ss_pred ---------ccccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHh----------
Q 040814 528 ---------NRVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWK---------- 587 (664)
Q Consensus 528 ---------~~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~---------- 587 (664)
....|+..|+|||.+.+ ..++.++|||||||++|||++|+.||...+.......+.....
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~ 239 (334)
T cd07855 160 SPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRI 239 (334)
T ss_pred cCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhh
Confidence 12357788999999865 5689999999999999999999999965433222211111100
Q ss_pred -cCChhHhhhhhh-CCCCC-----HHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 588 -EGKASELMEAAL-DGPCP-----ENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 588 -~~~~~~~~d~~~-~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
.....+..+... ....+ ......+.+++.+||+.+|++|||+++++..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 240 GSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred chhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 000111111000 01111 1234668889999999999999999998864
No 351
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.90 E-value=1.1e-23 Score=217.60 Aligned_cols=211 Identities=23% Similarity=0.273 Sum_probs=155.9
Q ss_pred ccccceeccCCCcCEEEEEEc-CCcEEEEEeccc------------------------ceEEEEeEeecCCeeEEEEecc
Q 040814 421 FSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG------------------------RTIRLMGCSLHGAERILVYEFM 475 (664)
Q Consensus 421 ~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~------------------------~~v~l~g~~~~~~~~~lV~Ey~ 475 (664)
|+..+.||+|++|.||++... +++.+++|++.. +++++++++..+...++|+||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 456789999999999999975 589999998743 2577888888889999999999
Q ss_pred CCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------cc
Q 040814 476 PNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NR 529 (664)
Q Consensus 476 ~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~ 529 (664)
++ +|.+++.. ....+++..+..++.||+.||.|||+.+++|.|+++.|. ..
T Consensus 81 ~~-~l~~~l~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~ 157 (283)
T cd05118 81 DT-DLYKLIKD--RQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTH 157 (283)
T ss_pred CC-CHHHHHHh--hcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccC
Confidence 85 88888743 235799999999999999999999999999999887761 11
Q ss_pred ccccCCccchhhhccC-CCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCC---hhHhhh------hhh
Q 040814 530 VVGTYGYMAPEYAMNG-IVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGK---ASELME------AAL 599 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~~~-~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~d------~~~ 599 (664)
..++..|+|||.+.+. .++.++||||||+++|||++|+.||...+..+....+........ .....+ ...
T Consensus 158 ~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd05118 158 YVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSF 237 (283)
T ss_pred ccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhh
Confidence 3466779999999876 789999999999999999999999865443222111111000000 000000 000
Q ss_pred CC-------CCCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 600 DG-------PCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 600 ~~-------~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
.. .........+.+++.+||+.||.+||++++++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 238 PKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred ccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 00 011223467889999999999999999999985
No 352
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.90 E-value=8.1e-24 Score=213.30 Aligned_cols=181 Identities=15% Similarity=0.045 Sum_probs=143.9
Q ss_pred CCCcCEEEEEEc-CCcEEEEEeccc-----------------ceEEEEeEeecCCeeEEEEeccCCCchhHHhhcccccC
Q 040814 430 GGFGPVYKGKLL-DGQVIAVKRLSG-----------------RTIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKK 491 (664)
Q Consensus 430 G~fg~Vy~~~~~-~~~~vavK~~~~-----------------~~v~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~ 491 (664)
|.+|.||+++.. +++.+|+|++.+ +++++++++.+.+..++||||+++|+|.+++.. ..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~ 80 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSEYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK---FL 80 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhhhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH---hc
Confidence 889999999975 489999999864 368888988889999999999999999999843 34
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-----------------------ccccccCCccchhhhccCCCC
Q 040814 492 QLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-----------------------NRVVGTYGYMAPEYAMNGIVS 548 (664)
Q Consensus 492 ~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-----------------------~~~~Gt~~Y~APE~~~~~~~s 548 (664)
.+++..+..++.|++.||.|||+.+++|+|+++.|. ....++..|+|||.+.+..++
T Consensus 81 ~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 160 (237)
T cd05576 81 NIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGGISEET 160 (237)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCcccCCCCCC
Confidence 699999999999999999999999999999998771 112345679999999888899
Q ss_pred ccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCC
Q 040814 549 MKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPT 628 (664)
Q Consensus 549 ~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt 628 (664)
.++||||+||++|||++|+.|+....... ........+......+.+++.+|++.||++||+
T Consensus 161 ~~~DvwslG~il~el~~g~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~ 222 (237)
T cd05576 161 EACDWWSLGAILFELLTGKTLVECHPSGI------------------NTHTTLNIPEWVSEEARSLLQQLLQFNPTERLG 222 (237)
T ss_pred chhhHHHHHHHHHHHHHCcchhhcCchhc------------------ccccccCCcccCCHHHHHHHHHHccCCHHHhcC
Confidence 99999999999999999998864321100 000001122223455777888899999999999
Q ss_pred HHH
Q 040814 629 MAD 631 (664)
Q Consensus 629 ~~e 631 (664)
+.+
T Consensus 223 ~~~ 225 (237)
T cd05576 223 AGV 225 (237)
T ss_pred CCc
Confidence 743
No 353
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.90 E-value=2.6e-24 Score=206.94 Aligned_cols=203 Identities=21% Similarity=0.235 Sum_probs=161.1
Q ss_pred cCccccceeccCCCcCEEEEEEc-CCcEEEEEecc-------------------------------cceEEEEeEeecCC
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLS-------------------------------GRTIRLMGCSLHGA 466 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~-------------------------------~~~v~l~g~~~~~~ 466 (664)
+.|...+.||+|..+.|-++..+ .|+..|+|++. +.++++.+.+..+.
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s 96 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA 96 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc
Confidence 45777899999999999998874 48999999884 23799999999999
Q ss_pred eeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc--------------------
Q 040814 467 ERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN-------------------- 526 (664)
Q Consensus 467 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n-------------------- 526 (664)
..++|+|.|+.|.|.++|. ....+++.+..+|++|+..|++|||..+++|+|++++|
T Consensus 97 F~FlVFdl~prGELFDyLt---s~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l 173 (411)
T KOG0599|consen 97 FVFLVFDLMPRGELFDYLT---SKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQL 173 (411)
T ss_pred hhhhhhhhcccchHHHHhh---hheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeecc
Confidence 9999999999999999993 45689999999999999999999999999999999988
Q ss_pred -----cccccccCCccchhhhcc------CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhh
Q 040814 527 -----TNRVVGTYGYMAPEYAMN------GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELM 595 (664)
Q Consensus 527 -----~~~~~Gt~~Y~APE~~~~------~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (664)
....+||++|+|||.+.- ..|+..+|+|+.|||+|-|+.|.+||-.... +-++ ..+.+++.
T Consensus 174 ~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQ---mlML-R~ImeGky---- 245 (411)
T KOG0599|consen 174 EPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQ---MLML-RMIMEGKY---- 245 (411)
T ss_pred CCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHH---HHHH-HHHHhccc----
Confidence 234689999999999852 3488999999999999999999999842110 0000 01111111
Q ss_pred hhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 596 EAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 596 d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
....+.-.+......+++.+|++.||.+|.|++|++.
T Consensus 246 --qF~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 246 --QFRSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred --ccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 0011112345566778888999999999999999874
No 354
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.90 E-value=7.1e-24 Score=216.26 Aligned_cols=195 Identities=21% Similarity=0.262 Sum_probs=152.4
Q ss_pred eccCCCcCEEEEEEcC-CcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEEEeccCCCch
Q 040814 427 LGEGGFGPVYKGKLLD-GQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILVYEFMPNKSL 480 (664)
Q Consensus 427 lg~G~fg~Vy~~~~~~-~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV~Ey~~~gsL 480 (664)
||+|+||.||++...+ ++.+|+|.+.. +++++++.+..+...++||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 6899999999999865 99999998743 246777888888899999999999999
Q ss_pred hHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc---------------------------------
Q 040814 481 DFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------------- 527 (664)
Q Consensus 481 ~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------------- 527 (664)
.+++.. ...+++..+..++.||+.||.|||+.+.+|.|+++.|.
T Consensus 81 ~~~l~~---~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 157 (265)
T cd05579 81 ASLLEN---VGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKE 157 (265)
T ss_pred HHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccccc
Confidence 999943 34799999999999999999999999999998887661
Q ss_pred -ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHH
Q 040814 528 -NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPEN 606 (664)
Q Consensus 528 -~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 606 (664)
....++..|+|||...+...+.++||||||+++|||++|+.||......+.. . .+.... ...+..
T Consensus 158 ~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~---~---------~~~~~~--~~~~~~ 223 (265)
T cd05579 158 DKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIF---Q---------NILNGK--IEWPED 223 (265)
T ss_pred ccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHH---H---------HHhcCC--cCCCcc
Confidence 1124667899999999888999999999999999999999998643321111 0 000000 011111
Q ss_pred --HHHHHHHHHHhcccccCCCCCCHHHHHHHHhc
Q 040814 607 --ELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQ 638 (664)
Q Consensus 607 --~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 638 (664)
....+..++.+||+.+|++|||+.++.+.|+.
T Consensus 224 ~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~ 257 (265)
T cd05579 224 VEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNH 257 (265)
T ss_pred ccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcC
Confidence 14567788889999999999999777776654
No 355
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.90 E-value=8e-24 Score=212.53 Aligned_cols=214 Identities=21% Similarity=0.253 Sum_probs=162.5
Q ss_pred hcCccccceeccCCCcCEEEEEEc-CCcEEEEEecc------------------------cceEEEEeEeec-----CCe
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLS------------------------GRTIRLMGCSLH-----GAE 467 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~------------------------~~~v~l~g~~~~-----~~~ 467 (664)
...|...+.||+|+||.|..+..+ +|+.||||++. +|++.+...... -+.
T Consensus 21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D 100 (359)
T KOG0660|consen 21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND 100 (359)
T ss_pred cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence 345555789999999999999974 49999999985 235666666554 356
Q ss_pred eEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc---------------------
Q 040814 468 RILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN--------------------- 526 (664)
Q Consensus 468 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n--------------------- 526 (664)
.++|+|+| .-+|...|. ....|+......++.||++||.|+|+.+++|+|.+|.|
T Consensus 101 vYiV~elM-etDL~~iik---~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~ 176 (359)
T KOG0660|consen 101 VYLVFELM-ETDLHQIIK---SQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLD 176 (359)
T ss_pred eEEehhHH-hhHHHHHHH---cCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeecc
Confidence 89999999 458888883 34459999999999999999999999999999999988
Q ss_pred -------cccccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChh------
Q 040814 527 -------TNRVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKAS------ 592 (664)
Q Consensus 527 -------~~~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~------ 592 (664)
.+..+-|..|.|||.+.. ..||.+.||||.|||+.||++|++-|.+.+..++++++..........
T Consensus 177 ~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~ 256 (359)
T KOG0660|consen 177 KFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIR 256 (359)
T ss_pred ccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhc
Confidence 123456889999999864 679999999999999999999999998887777776665433222111
Q ss_pred -----HhhhhhhC-CCCC-----HHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 593 -----ELMEAALD-GPCP-----ENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 593 -----~~~d~~~~-~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
..+..... ...+ +......+++..++|..||.+|+|++|.++.
T Consensus 257 s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 257 SEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred cHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 11111000 0111 1233457788888999999999999998754
No 356
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.90 E-value=1.3e-24 Score=243.46 Aligned_cols=159 Identities=23% Similarity=0.276 Sum_probs=140.2
Q ss_pred HHHHHHHhcCccccceeccCCCcCEEEEEEcC-CcEEEEEecccc-------------------------eEEEEeEeec
Q 040814 411 FQTIAAATNNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSGR-------------------------TIRLMGCSLH 464 (664)
Q Consensus 411 ~~~i~~~t~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~~-------------------------~v~l~g~~~~ 464 (664)
..++....++|.+.+.||+|+||.|..++.+. ++.+|+|++++- ++++.-.+.+
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD 146 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD 146 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence 34566667899999999999999999999865 899999999762 4666667788
Q ss_pred CCeeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc------------------
Q 040814 465 GAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN------------------ 526 (664)
Q Consensus 465 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n------------------ 526 (664)
+.++|||||||+||+|..++. +...+++..+..++..|..||.-||+.|.+|+|++|.|
T Consensus 147 ~~~LYlVMdY~pGGDlltLlS---k~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsCl 223 (1317)
T KOG0612|consen 147 ERYLYLVMDYMPGGDLLTLLS---KFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCL 223 (1317)
T ss_pred ccceEEEEecccCchHHHHHh---hcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHH
Confidence 899999999999999999994 34479999999999999999999999999999999998
Q ss_pred ---------cccccccCCccchhhhc----c-CCCCccchHHHHHHHHHHHHhCCCCCCC
Q 040814 527 ---------TNRVVGTYGYMAPEYAM----N-GIVSMKADVFSFGVLLLEIVSGRKNNNC 572 (664)
Q Consensus 527 ---------~~~~~Gt~~Y~APE~~~----~-~~~s~ksDVySfGvvL~ElltG~~p~~~ 572 (664)
....+|||.|++||++. + +.|+..+|.||+||++|||+.|..||..
T Consensus 224 km~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa 283 (1317)
T KOG0612|consen 224 KMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA 283 (1317)
T ss_pred hcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH
Confidence 34568999999999995 3 5799999999999999999999999964
No 357
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.90 E-value=2.5e-24 Score=216.83 Aligned_cols=214 Identities=18% Similarity=0.219 Sum_probs=171.0
Q ss_pred hcCccccceeccCCCcCEEEEEEcC-CcEEEEEeccc---------------------------ceEEEEeEeecCCeeE
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG---------------------------RTIRLMGCSLHGAERI 469 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~---------------------------~~v~l~g~~~~~~~~~ 469 (664)
+++|.+..++|+|.||.|-.+.... +..||||+++. ..|.+.+++...++.+
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiC 167 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHIC 167 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceE
Confidence 6789999999999999999998744 78999998863 1478889999999999
Q ss_pred EEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc-----------------------
Q 040814 470 LVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN----------------------- 526 (664)
Q Consensus 470 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n----------------------- 526 (664)
||+|.| |-|+.+||.++ +..+++...+..|+.|++++++|||+.+.+|.|++|+|
T Consensus 168 ivfell-G~S~~dFlk~N-~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~ 245 (415)
T KOG0671|consen 168 IVFELL-GLSTFDFLKEN-NYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRP 245 (415)
T ss_pred EEEecc-ChhHHHHhccC-CccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceecc
Confidence 999988 55999999542 45689999999999999999999999999999999998
Q ss_pred --------------------cccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHH
Q 040814 527 --------------------TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLW 586 (664)
Q Consensus 527 --------------------~~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~ 586 (664)
...++.|..|.|||++.+..++..+||||+||||+|+.||..-|...+..+.+.+++...
T Consensus 246 ~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIl 325 (415)
T KOG0671|consen 246 LKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERIL 325 (415)
T ss_pred CCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhh
Confidence 123467889999999999999999999999999999999999998776656554444322
Q ss_pred hcCChhHhhhhh-------------------------hCC--------CCCHHHHHHHHHHHHhcccccCCCCCCHHHHH
Q 040814 587 KEGKASELMEAA-------------------------LDG--------PCPENELLRCIHAGLLCVHDQAVNRPTMADVV 633 (664)
Q Consensus 587 ~~~~~~~~~d~~-------------------------~~~--------~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl 633 (664)
.. -...++... .+. .....+..++.+++..++..||.+|+|+.|++
T Consensus 326 Gp-~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL 404 (415)
T KOG0671|consen 326 GP-IPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREAL 404 (415)
T ss_pred CC-CcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHh
Confidence 11 000111000 000 11235566799999999999999999999987
Q ss_pred H
Q 040814 634 S 634 (664)
Q Consensus 634 ~ 634 (664)
.
T Consensus 405 ~ 405 (415)
T KOG0671|consen 405 S 405 (415)
T ss_pred c
Confidence 5
No 358
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.90 E-value=2.3e-23 Score=218.90 Aligned_cols=207 Identities=15% Similarity=0.173 Sum_probs=147.3
Q ss_pred ceeccCCCcCEEEEEEcCCcEEEEEeccc------------------------ceEEEEeEeecCCeeEEEEeccCCCch
Q 040814 425 NKLGEGGFGPVYKGKLLDGQVIAVKRLSG------------------------RTIRLMGCSLHGAERILVYEFMPNKSL 480 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~~~~~vavK~~~~------------------------~~v~l~g~~~~~~~~~lV~Ey~~~gsL 480 (664)
+.+|.|+++.||++.. +++.||||++.. +++++++++...+..+++|||+++|+|
T Consensus 8 ~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l 86 (314)
T cd08216 8 KCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSC 86 (314)
T ss_pred HhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCH
Confidence 4445555555555544 689999998742 357888899889999999999999999
Q ss_pred hHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc---------------------------------
Q 040814 481 DFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------------- 527 (664)
Q Consensus 481 ~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------------- 527 (664)
.+++... ....+++.....++.|+++||.|||+.+++|+|+++.|.
T Consensus 87 ~~~l~~~-~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~ 165 (314)
T cd08216 87 EDLLKTH-FPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFP 165 (314)
T ss_pred HHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeecccccccccccccc
Confidence 9999643 234688999999999999999999999999999988771
Q ss_pred ccccccCCccchhhhcc--CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhH-------HhcCC-------h
Q 040814 528 NRVVGTYGYMAPEYAMN--GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYL-------WKEGK-------A 591 (664)
Q Consensus 528 ~~~~Gt~~Y~APE~~~~--~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~-------~~~~~-------~ 591 (664)
....++..|+|||++.. ..++.++|||||||++|||++|+.||........ ..... ..... .
T Consensus 166 ~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (314)
T cd08216 166 KSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQM--LLEKVRGTVPCLLDKSTYPLYEDSM 243 (314)
T ss_pred ccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHhccCccccccCchhhhcCCc
Confidence 01235567999999976 3588999999999999999999999875432111 00000 00000 0
Q ss_pred hH----hhhh----hhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 592 SE----LMEA----ALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 592 ~~----~~d~----~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
.. ..+. ............++.+++.+||+.||++|||++|+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 244 SQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred CcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 00 0000 00111122334567889999999999999999999864
No 359
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.90 E-value=2.2e-23 Score=221.42 Aligned_cols=213 Identities=22% Similarity=0.240 Sum_probs=154.1
Q ss_pred cCccc-cceeccCCCcCEEEEEEc-CCcEEEEEecc------------------------------------cceEEEEe
Q 040814 419 NNFST-TNKLGEGGFGPVYKGKLL-DGQVIAVKRLS------------------------------------GRTIRLMG 460 (664)
Q Consensus 419 ~~~~~-~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~------------------------------------~~~v~l~g 460 (664)
++|.. .+.||+|+||.||+|... +++.||||++. ++++++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 44543 467999999999999975 48999999763 23578899
Q ss_pred EeecCCeeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-------------
Q 040814 461 CSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------- 527 (664)
Q Consensus 461 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------- 527 (664)
++..++..++||||++ |+|.+++. ....+++.....++.|++.||.|||+.+++|.|+++.|.
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~---~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~df 163 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVD---RKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADF 163 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCc
Confidence 9999999999999997 68988883 345789999999999999999999999999998887761
Q ss_pred --c-------------------------cccccCCccchhhhccC-CCCccchHHHHHHHHHHHHhCCCCCCCCCCCCch
Q 040814 528 --N-------------------------RVVGTYGYMAPEYAMNG-IVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPL 579 (664)
Q Consensus 528 --~-------------------------~~~Gt~~Y~APE~~~~~-~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~ 579 (664)
. ...++..|+|||.+.+. .++.++|||||||++|||++|+.||......+..
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~ 243 (335)
T PTZ00024 164 GLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQL 243 (335)
T ss_pred cceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 0 11246679999999764 4799999999999999999999998755433222
Q ss_pred hhhhhHHhcCChh---Hhh-----hh---hhCC---CCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 580 NLVGYLWKEGKAS---ELM-----EA---ALDG---PCPENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 580 ~~~~~~~~~~~~~---~~~-----d~---~~~~---~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
..+.......... +.. .+ .... .........+.+++.+||+.+|++|||++|++..
T Consensus 244 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~ 313 (335)
T PTZ00024 244 GRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKH 313 (335)
T ss_pred HHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence 1111111000000 000 00 0000 0011223557788899999999999999999863
No 360
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.90 E-value=1.8e-23 Score=221.45 Aligned_cols=217 Identities=20% Similarity=0.216 Sum_probs=158.2
Q ss_pred CccccceeccCCCcCEEEEEEcC-CcEEEEEeccc------------------------ceEEEEeEeecCC-----eeE
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG------------------------RTIRLMGCSLHGA-----ERI 469 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~------------------------~~v~l~g~~~~~~-----~~~ 469 (664)
+|++.+.||+|+||.||+|.... ++.||||++.+ +++++.+++.... ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 47788999999999999999854 89999998754 2466777776664 789
Q ss_pred EEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc----------------------
Q 040814 470 LVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT---------------------- 527 (664)
Q Consensus 470 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~---------------------- 527 (664)
+||||++ ++|.+++. +...+++..+..++.||+.||.|||+.+++|+|+++.|.
T Consensus 81 lv~e~~~-~~l~~~l~---~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~ 156 (330)
T cd07834 81 IVTELME-TDLHKVIK---SPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPD 156 (330)
T ss_pred EEecchh-hhHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccc
Confidence 9999998 48888884 334899999999999999999999999999999888761
Q ss_pred -------ccccccCCccchhhhccC-CCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHh-----------c
Q 040814 528 -------NRVVGTYGYMAPEYAMNG-IVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWK-----------E 588 (664)
Q Consensus 528 -------~~~~Gt~~Y~APE~~~~~-~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~-----------~ 588 (664)
....++..|+|||++.+. .++.++||||||+++|||++|+.||......+....+..... .
T Consensus 157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 236 (330)
T cd07834 157 EDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITS 236 (330)
T ss_pred ccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccc
Confidence 112457789999999887 799999999999999999999999875543221111111000 0
Q ss_pred CChhHhhhhhhC-CC-----CCHHHHHHHHHHHHhcccccCCCCCCHHHHHHH--Hhccc
Q 040814 589 GKASELMEAALD-GP-----CPENELLRCIHAGLLCVHDQAVNRPTMADVVSC--LRQNN 640 (664)
Q Consensus 589 ~~~~~~~d~~~~-~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~--L~~~~ 640 (664)
......+..... .. ........+.+++.+||+.+|++|||++++++. +++..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~ 296 (330)
T cd07834 237 EKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLH 296 (330)
T ss_pred cchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhc
Confidence 000111110000 00 011134557788999999999999999999874 44443
No 361
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.90 E-value=2.6e-23 Score=214.58 Aligned_cols=211 Identities=20% Similarity=0.259 Sum_probs=153.6
Q ss_pred ccccceeccCCCcCEEEEEEcC-CcEEEEEeccc------------------------ceEEEEeEeecCCeeEEEEecc
Q 040814 421 FSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG------------------------RTIRLMGCSLHGAERILVYEFM 475 (664)
Q Consensus 421 ~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~------------------------~~v~l~g~~~~~~~~~lV~Ey~ 475 (664)
|+..+.||+|++|.||+|...+ ++.+|+|++.. +++++.+++...+..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 4566889999999999999865 89999998764 1466778888888999999999
Q ss_pred CCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------cc
Q 040814 476 PNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NR 529 (664)
Q Consensus 476 ~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~ 529 (664)
+ ++|.+++... ...+++..+..++.|+++||.|||+.+++|.++++.|. ..
T Consensus 81 ~-~~l~~~i~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~ 157 (282)
T cd07829 81 D-MDLKKYLDKR--PGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTH 157 (282)
T ss_pred C-cCHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCc
Confidence 8 5899999532 14799999999999999999999999999999888761 01
Q ss_pred ccccCCccchhhhccC-CCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChh------Hh--hhhhhC
Q 040814 530 VVGTYGYMAPEYAMNG-IVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKAS------EL--MEAALD 600 (664)
Q Consensus 530 ~~Gt~~Y~APE~~~~~-~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~------~~--~d~~~~ 600 (664)
..++..|+|||.+.+. .++.++|||||||++|||++|+.||...........+.......... .+ .+....
T Consensus 158 ~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (282)
T cd07829 158 EVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFP 237 (282)
T ss_pred cccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccccccccc
Confidence 2245679999999776 78999999999999999999999986543221111110000000000 00 000000
Q ss_pred C-------CCCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 601 G-------PCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 601 ~-------~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
. .........+.+++.+||+.+|++||++++++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 238 KFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred ccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 0 000012456888999999999999999999875
No 362
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.90 E-value=3.6e-23 Score=220.46 Aligned_cols=211 Identities=15% Similarity=0.165 Sum_probs=149.0
Q ss_pred cCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc----------------------ceEEEEeEeecC----------
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG----------------------RTIRLMGCSLHG---------- 465 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~----------------------~~v~l~g~~~~~---------- 465 (664)
.+|...+.||+|+||.||+|... +++.||+|++.. +++++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 57889999999999999999975 489999998742 245555544332
Q ss_pred ----CeeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------
Q 040814 466 ----AERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-------------- 527 (664)
Q Consensus 466 ----~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-------------- 527 (664)
...++||||++ ++|..++. ...+++..+..++.||+.||.|||+.+++|+|+++.|.
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~df 159 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLE----QGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDF 159 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCc
Confidence 35789999997 58888873 34689999999999999999999999999998887651
Q ss_pred ----------------ccccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHh---
Q 040814 528 ----------------NRVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWK--- 587 (664)
Q Consensus 528 ----------------~~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~--- 587 (664)
....++..|+|||.+.+ ..++.++|||||||++|||++|+.||.................
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 239 (342)
T cd07854 160 GLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVR 239 (342)
T ss_pred ccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 01135678999998754 5688999999999999999999999965432211111000000
Q ss_pred ---cCC----hhHhhh-hhhCCCCC-----HHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 588 ---EGK----ASELME-AALDGPCP-----ENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 588 ---~~~----~~~~~d-~~~~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
... ...... .......+ .....++.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 240 EEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred hHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 000 000000 00000011 112345778889999999999999999985
No 363
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.90 E-value=6e-23 Score=219.03 Aligned_cols=219 Identities=22% Similarity=0.231 Sum_probs=158.0
Q ss_pred HHHHHHHhcCccccceeccCCCcCEEEEEE-cCCcEEEEEeccc------------------------ceEEEEeEeecC
Q 040814 411 FQTIAAATNNFSTTNKLGEGGFGPVYKGKL-LDGQVIAVKRLSG------------------------RTIRLMGCSLHG 465 (664)
Q Consensus 411 ~~~i~~~t~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~------------------------~~v~l~g~~~~~ 465 (664)
..++...+++|.+.+.||+|+||.||+|.. .+++.||+|++.. +++++.+++...
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~ 88 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA 88 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence 445667889999999999999999999986 4589999998742 257777776532
Q ss_pred ------CeeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc------------
Q 040814 466 ------AERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------ 527 (664)
Q Consensus 466 ------~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------ 527 (664)
...++++|++ +++|.+++. ...+++..+..++.||++||.|||+.+++|+++++.|.
T Consensus 89 ~~~~~~~~~~lv~~~~-~~~L~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~d 163 (345)
T cd07877 89 RSLEEFNDVYLVTHLM-GADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 163 (345)
T ss_pred ccccccccEEEEehhc-ccCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEec
Confidence 3467888886 789988773 34699999999999999999999999999999988761
Q ss_pred -----------ccccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhh
Q 040814 528 -----------NRVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELM 595 (664)
Q Consensus 528 -----------~~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (664)
....++..|+|||++.+ ..++.++|||||||++|||++|+.||...........+.... ......+.
T Consensus 164 fg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~ 242 (345)
T cd07877 164 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV-GTPGAELL 242 (345)
T ss_pred ccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh-CCCCHHHH
Confidence 12356788999999876 568899999999999999999999986433221111110000 00000000
Q ss_pred -----------hhhh----CCCC---CHHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 596 -----------EAAL----DGPC---PENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 596 -----------d~~~----~~~~---~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
...+ .... .......+.+++.+|++.||.+||++.++++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 243 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred hhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 0000 0000 00123457788899999999999999998854
No 364
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.89 E-value=1.2e-22 Score=216.41 Aligned_cols=214 Identities=19% Similarity=0.236 Sum_probs=154.6
Q ss_pred HHhcCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc------------------------ceEEEEeEeecCC----
Q 040814 416 AATNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG------------------------RTIRLMGCSLHGA---- 466 (664)
Q Consensus 416 ~~t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~------------------------~~v~l~g~~~~~~---- 466 (664)
...++|+..+.||+|+||.||++... +++.||||++.. +++++++++..+.
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence 35678999999999999999999864 589999998742 3577888776543
Q ss_pred --eeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-----------------
Q 040814 467 --ERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT----------------- 527 (664)
Q Consensus 467 --~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~----------------- 527 (664)
..++||||+ +++|..++. ...+++..+..++.||++||.|||+.+++|+|+++.|.
T Consensus 92 ~~~~~lv~e~~-~~~l~~~~~----~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~ 166 (343)
T cd07880 92 FHDFYLVMPFM-GTDLGKLMK----HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR 166 (343)
T ss_pred cceEEEEEecC-CCCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeccccc
Confidence 458999999 679988873 35799999999999999999999999999999988761
Q ss_pred ------ccccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhh-hh----------HHhcC
Q 040814 528 ------NRVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLV-GY----------LWKEG 589 (664)
Q Consensus 528 ------~~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~-~~----------~~~~~ 589 (664)
....+++.|+|||.+.+ ..++.++|||||||++|||++|+.||...........+ .. .+...
T Consensus 167 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (343)
T cd07880 167 QTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSE 246 (343)
T ss_pred ccccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcch
Confidence 11346788999999876 45899999999999999999999998644321110000 00 00000
Q ss_pred ChhHhhhhh--hCC----CCCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 590 KASELMEAA--LDG----PCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 590 ~~~~~~d~~--~~~----~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
......... ... .........+.+++.+|++.||++|||+.++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 247 DAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred hHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000000000 000 000122335778899999999999999999984
No 365
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.89 E-value=6.9e-23 Score=230.51 Aligned_cols=214 Identities=17% Similarity=0.170 Sum_probs=141.5
Q ss_pred HhcCccccceeccCCCcCEEEEEEcC-----CcEEEEEecccce------------------EEEE-eE-----eecCCe
Q 040814 417 ATNNFSTTNKLGEGGFGPVYKGKLLD-----GQVIAVKRLSGRT------------------IRLM-GC-----SLHGAE 467 (664)
Q Consensus 417 ~t~~~~~~~~lg~G~fg~Vy~~~~~~-----~~~vavK~~~~~~------------------v~l~-g~-----~~~~~~ 467 (664)
..++|+..++||+|+||.||+|.+.+ ++.||||++.... ..++ ++ +.++.+
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVEIWMNERVRRACPNSCADFVYGFLEPVSSKKEDE 209 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhHHHHHHHHHhhchhhHHHHHHhhhcccccccCCc
Confidence 46789999999999999999999743 6899999876410 0000 10 245677
Q ss_pred eEEEEeccCCCchhHHhhcccc-----------------cCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc---
Q 040814 468 RILVYEFMPNKSLDFFIFDSVK-----------------KKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--- 527 (664)
Q Consensus 468 ~~lV~Ey~~~gsL~~~l~~~~~-----------------~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--- 527 (664)
.+|||||+++++|.+++.+... ........+..|+.||+.||.|||+.+++|+|+++.|.
T Consensus 210 ~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~ 289 (566)
T PLN03225 210 YWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFS 289 (566)
T ss_pred eEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEe
Confidence 9999999999999999854210 00112334567999999999999999999999999871
Q ss_pred -------------------------ccccccCCccchhhhccC----------------------CCCccchHHHHHHHH
Q 040814 528 -------------------------NRVVGTYGYMAPEYAMNG----------------------IVSMKADVFSFGVLL 560 (664)
Q Consensus 528 -------------------------~~~~Gt~~Y~APE~~~~~----------------------~~s~ksDVySfGvvL 560 (664)
....+|+.|||||.+... .++.++|||||||+|
T Consensus 290 ~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL 369 (566)
T PLN03225 290 EGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIF 369 (566)
T ss_pred CCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHH
Confidence 123567899999976422 244577999999999
Q ss_pred HHHHhCCCCCCCCCCCCchhhhhhHHhcC-ChhHhhhhhhCCCCCH----------HHHHHHHHHHHhcccccCCCCCCH
Q 040814 561 LEIVSGRKNNNCYDEERPLNLVGYLWKEG-KASELMEAALDGPCPE----------NELLRCIHAGLLCVHDQAVNRPTM 629 (664)
Q Consensus 561 ~ElltG~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~----------~~~~~l~~l~~~Cl~~dP~~RPt~ 629 (664)
|||+++..+++. ....+...+...+ ...... ......... .......+++.+|++.||++|||+
T Consensus 370 ~el~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta 444 (566)
T PLN03225 370 LQMAFPNLRSDS----NLIQFNRQLKRNDYDLVAWR-KLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISA 444 (566)
T ss_pred HHHHhCcCCCch----HHHHHHHHHHhcCCcHHHHH-HhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCH
Confidence 999997765421 1111111000000 000100 000000000 111234578889999999999999
Q ss_pred HHHHHH
Q 040814 630 ADVVSC 635 (664)
Q Consensus 630 ~evl~~ 635 (664)
.|+++.
T Consensus 445 ~e~L~H 450 (566)
T PLN03225 445 KAALAH 450 (566)
T ss_pred HHHhCC
Confidence 999864
No 366
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.89 E-value=3.8e-24 Score=210.23 Aligned_cols=194 Identities=22% Similarity=0.241 Sum_probs=153.0
Q ss_pred HhcCccccceeccCCCcCEEEEEEcC-CcEEEEEecccceE-------------------------EEEeEeecCCeeEE
Q 040814 417 ATNNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSGRTI-------------------------RLMGCSLHGAERIL 470 (664)
Q Consensus 417 ~t~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~~~v-------------------------~l~g~~~~~~~~~l 470 (664)
.-++|+..++||+|.||.|-+++-+. ++.+|+|++++..| .+.-.+...+.+|.
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCF 245 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCF 245 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEE
Confidence 34678889999999999999999754 99999999987421 12223445678999
Q ss_pred EEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc------------------------
Q 040814 471 VYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN------------------------ 526 (664)
Q Consensus 471 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n------------------------ 526 (664)
||||+.+|.|..+|. +...+++.....+-.+|..||.|||+.+++.+|++.+|
T Consensus 246 VMeyanGGeLf~HLs---rer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g 322 (516)
T KOG0690|consen 246 VMEYANGGELFFHLS---RERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYG 322 (516)
T ss_pred EEEEccCceEeeehh---hhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhccccc
Confidence 999999999998883 45789999999999999999999999999999888776
Q ss_pred --cccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCC
Q 040814 527 --TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCP 604 (664)
Q Consensus 527 --~~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 604 (664)
+...+||+.|+|||++....|...+|.|.+||++|||++|+.||...+.+....++ +-. .-.+|
T Consensus 323 ~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLI------------l~e--d~kFP 388 (516)
T KOG0690|consen 323 DTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELI------------LME--DLKFP 388 (516)
T ss_pred ceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHH------------Hhh--hccCC
Confidence 45679999999999999999999999999999999999999999755443332222 001 11233
Q ss_pred HHHHHHHHHHHHhcccccCCCCC
Q 040814 605 ENELLRCIHAGLLCVHDQAVNRP 627 (664)
Q Consensus 605 ~~~~~~l~~l~~~Cl~~dP~~RP 627 (664)
.....+...+..-.|.+||.+|.
T Consensus 389 r~ls~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 389 RTLSPEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred ccCCHHHHHHHHHHhhcChHhhc
Confidence 33334455556667899999994
No 367
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.89 E-value=2.2e-23 Score=222.17 Aligned_cols=212 Identities=20% Similarity=0.234 Sum_probs=153.0
Q ss_pred HhcCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc------------------------ceEEEEeEeecCCe----
Q 040814 417 ATNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG------------------------RTIRLMGCSLHGAE---- 467 (664)
Q Consensus 417 ~t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~------------------------~~v~l~g~~~~~~~---- 467 (664)
..++|+..+.||+|++|.||+|+.. +++.||||++.. +++++++++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 4678999999999999999999985 488999998753 12444555544443
Q ss_pred --eEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc------------------
Q 040814 468 --RILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------ 527 (664)
Q Consensus 468 --~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------ 527 (664)
.++|+||+ +++|.+++. ...+++..+..++.||++||.|||+.+++|+++++.|.
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~----~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~ 167 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVK----CQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARH 167 (343)
T ss_pred ccEEEEEecC-CCCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccc
Confidence 89999999 569988883 35799999999999999999999999999999888761
Q ss_pred -----ccccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHh-------
Q 040814 528 -----NRVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASEL------- 594 (664)
Q Consensus 528 -----~~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~------- 594 (664)
....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...........+.... .....++
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~ 246 (343)
T cd07851 168 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLV-GTPDEELLQKISSE 246 (343)
T ss_pred ccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhc-CCCCHHHHhhccch
Confidence 12346778999999865 468899999999999999999999986443221111110000 0000000
Q ss_pred -----hhhhhCC---CC---CHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 595 -----MEAALDG---PC---PENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 595 -----~d~~~~~---~~---~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
+...... .. .......+.+++.+||+.+|++|||+.+|++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 247 SARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred hHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 0000000 00 0112456888999999999999999999875
No 368
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.89 E-value=1.4e-23 Score=226.10 Aligned_cols=155 Identities=24% Similarity=0.359 Sum_probs=135.2
Q ss_pred cccceeccCCCcCEEEEEEc-CCcEEEEEeccc-----------------------ceEEEEeEeecC------CeeEEE
Q 040814 422 STTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-----------------------RTIRLMGCSLHG------AERILV 471 (664)
Q Consensus 422 ~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-----------------------~~v~l~g~~~~~------~~~~lV 471 (664)
...+.||+|+||.||+|+.+ .|+.||||.+++ |+|++.+.-... ...++|
T Consensus 16 ~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlv 95 (732)
T KOG4250|consen 16 EMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLV 95 (732)
T ss_pred eehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEE
Confidence 34578999999999999964 599999998854 367777665443 357899
Q ss_pred EeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc-------------------------
Q 040814 472 YEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN------------------------- 526 (664)
Q Consensus 472 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n------------------------- 526 (664)
||||.+|||+..|.+..+...|++.+.+.+..+++.||.|||+.+++|+|+||.|
T Consensus 96 mEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~ 175 (732)
T KOG4250|consen 96 MEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELD 175 (732)
T ss_pred EeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCC
Confidence 9999999999999888888899999999999999999999999999999999998
Q ss_pred ----cccccccCCccchhhhc-cCCCCccchHHHHHHHHHHHHhCCCCCCCCCCC
Q 040814 527 ----TNRVVGTYGYMAPEYAM-NGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEE 576 (664)
Q Consensus 527 ----~~~~~Gt~~Y~APE~~~-~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~ 576 (664)
...++||..|.+||.+. .+.|+..+|.|||||++||++||..||......
T Consensus 176 d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~p 230 (732)
T KOG4250|consen 176 DNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGP 230 (732)
T ss_pred CCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCc
Confidence 24467999999999998 488999999999999999999999999765443
No 369
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.89 E-value=2.9e-22 Score=212.57 Aligned_cols=211 Identities=20% Similarity=0.207 Sum_probs=149.7
Q ss_pred CccccceeccCCCcCEEEEEEc-C--CcEEEEEeccc-------------------------ceEEEEeEeecC----Ce
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLL-D--GQVIAVKRLSG-------------------------RTIRLMGCSLHG----AE 467 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~-~--~~~vavK~~~~-------------------------~~v~l~g~~~~~----~~ 467 (664)
+|++.+.||+|+||.||++... . ++.||+|++.. +++++++.+... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4778899999999999999974 3 77899997642 246777764332 44
Q ss_pred eEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------
Q 040814 468 RILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-------------------- 527 (664)
Q Consensus 468 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-------------------- 527 (664)
.++++||+. ++|..++. ....+++..+..++.||+.||.|||+.+++|+|+++.|.
T Consensus 81 ~~~~~e~~~-~~L~~~l~---~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~ 156 (332)
T cd07857 81 LYLYEELME-ADLHQIIR---SGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFS 156 (332)
T ss_pred EEEEEeccc-CCHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecc
Confidence 688899986 68988883 346799999999999999999999999999999888761
Q ss_pred ----------ccccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHh---------
Q 040814 528 ----------NRVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWK--------- 587 (664)
Q Consensus 528 ----------~~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~--------- 587 (664)
....||..|+|||++.+ ..++.++|||||||++|||++|+.||...+.......+.....
T Consensus 157 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (332)
T cd07857 157 ENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSR 236 (332)
T ss_pred cccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 11357889999998865 5689999999999999999999999865432211111000000
Q ss_pred --cCChhHhhhhhhCC-C-----CCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 588 --EGKASELMEAALDG-P-----CPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 588 --~~~~~~~~d~~~~~-~-----~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
...........-.. . ........+.+++.+|++.||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 237 IGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred hhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00000000000000 0 00112346778899999999999999999874
No 370
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.89 E-value=2.5e-23 Score=202.91 Aligned_cols=207 Identities=18% Similarity=0.155 Sum_probs=159.1
Q ss_pred HhcCcccc-ceeccCCCcCEEEEEEcC-CcEEEEEecc------------------cceEEEEeEeec----CCeeEEEE
Q 040814 417 ATNNFSTT-NKLGEGGFGPVYKGKLLD-GQVIAVKRLS------------------GRTIRLMGCSLH----GAERILVY 472 (664)
Q Consensus 417 ~t~~~~~~-~~lg~G~fg~Vy~~~~~~-~~~vavK~~~------------------~~~v~l~g~~~~----~~~~~lV~ 472 (664)
.|++|++. ++||-|-.|.|-.+..+. ++.+|+|++. +++|.+++.+.. ...+++||
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVm 138 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVM 138 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeee
Confidence 46677653 679999999999998754 8999999884 247888887653 35578999
Q ss_pred eccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc--------------------------
Q 040814 473 EFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN-------------------------- 526 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n-------------------------- 526 (664)
|.|+||.|+..+.++ ....++++++-+|++||+.|+.|||+.++.|+|++++|
T Consensus 139 E~meGGeLfsriq~~-g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~ 217 (400)
T KOG0604|consen 139 ECMEGGELFSRIQDR-GDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEP 217 (400)
T ss_pred ecccchHHHHHHHHc-ccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccCCC
Confidence 999999999999653 45679999999999999999999999999999999998
Q ss_pred --cccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCC
Q 040814 527 --TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCP 604 (664)
Q Consensus 527 --~~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 604 (664)
....+-|+.|.|||++...+|+..+|+||+||++|-|++|.+||......... .+-...+..... .+|
T Consensus 218 ~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~ais--------pgMk~rI~~gqy--~FP 287 (400)
T KOG0604|consen 218 GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS--------PGMKRRIRTGQY--EFP 287 (400)
T ss_pred ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCC--------hhHHhHhhccCc--cCC
Confidence 12235688999999999999999999999999999999999999755442111 110111111111 222
Q ss_pred H----HHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 605 E----NELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 605 ~----~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
. ...+...+++...|..+|++|.|+.++..
T Consensus 288 ~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 288 EPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred ChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 2 23344556666678899999999999875
No 371
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.88 E-value=4.8e-23 Score=219.53 Aligned_cols=192 Identities=21% Similarity=0.291 Sum_probs=149.8
Q ss_pred cceeccCCCcCEEEEEEcC-CcEEEEE-------------------------ec-ccceEEEEeEeecCCe--eEEEEec
Q 040814 424 TNKLGEGGFGPVYKGKLLD-GQVIAVK-------------------------RL-SGRTIRLMGCSLHGAE--RILVYEF 474 (664)
Q Consensus 424 ~~~lg~G~fg~Vy~~~~~~-~~~vavK-------------------------~~-~~~~v~l~g~~~~~~~--~~lV~Ey 474 (664)
..+||+|.|-+||||.+.. |..||-- -+ |+++|+++.++.+... .-+|.|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 4689999999999998743 7666632 11 3578999999987665 6789999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhc--Ccccccccccc-------------------------c
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKY--SRLRMNESKVN-------------------------T 527 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~--~~~h~d~~~~n-------------------------~ 527 (664)
|..|+|..|+. +.+.++......+++||++||.|||++ -++|+|++..| .
T Consensus 125 ~TSGtLr~Y~k---k~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~a 201 (632)
T KOG0584|consen 125 FTSGTLREYRK---KHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHA 201 (632)
T ss_pred ccCCcHHHHHH---HhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcccc
Confidence 99999999994 567889999999999999999999986 47889888777 2
Q ss_pred ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCH--
Q 040814 528 NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPE-- 605 (664)
Q Consensus 528 ~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-- 605 (664)
..++|||.|||||.+. ..|++.+||||||+.++||+|+..|+.... ...++..+...+..|.
T Consensus 202 ksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~---------------n~AQIYKKV~SGiKP~sl 265 (632)
T KOG0584|consen 202 KSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECT---------------NPAQIYKKVTSGIKPAAL 265 (632)
T ss_pred ceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhC---------------CHHHHHHHHHcCCCHHHh
Confidence 3468999999999998 789999999999999999999999975322 1223333333332221
Q ss_pred --HHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 606 --NELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 606 --~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
-.-.++.+++.+|+.. .++|||+.|+++.
T Consensus 266 ~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 266 SKVKDPEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred hccCCHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 1123456677789998 9999999999864
No 372
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.88 E-value=1.4e-22 Score=205.26 Aligned_cols=188 Identities=22% Similarity=0.261 Sum_probs=148.5
Q ss_pred eccCCCcCEEEEEEcC-CcEEEEEecccc-------------------------eEEEEeEeecCCeeEEEEeccCCCch
Q 040814 427 LGEGGFGPVYKGKLLD-GQVIAVKRLSGR-------------------------TIRLMGCSLHGAERILVYEFMPNKSL 480 (664)
Q Consensus 427 lg~G~fg~Vy~~~~~~-~~~vavK~~~~~-------------------------~v~l~g~~~~~~~~~lV~Ey~~~gsL 480 (664)
||+|+||.||++...+ ++.+|+|.+.+. ++++++.+..+...++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 6999999999999854 899999987542 35566777788889999999999999
Q ss_pred hHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------ccccccC
Q 040814 481 DFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------NRVVGTY 534 (664)
Q Consensus 481 ~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~~~~Gt~ 534 (664)
.+++.. ...+++.....++.|++.||.|||+.+.+|.++++.|. ....++.
T Consensus 81 ~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~ 157 (250)
T cd05123 81 FSHLSK---EGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTP 157 (250)
T ss_pred HHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCc
Confidence 999943 34789999999999999999999999999998888761 1234678
Q ss_pred CccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHHHH
Q 040814 535 GYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRCIHA 614 (664)
Q Consensus 535 ~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l 614 (664)
.|+|||...+...+.++|+||||+++|||++|+.||...+... ... .+.. .....+......+.++
T Consensus 158 ~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~---~~~---------~~~~--~~~~~~~~~~~~l~~~ 223 (250)
T cd05123 158 EYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKE---IYE---------KILK--DPLRFPEFLSPEARDL 223 (250)
T ss_pred cccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH---HHH---------HHhc--CCCCCCCCCCHHHHHH
Confidence 8999999998889999999999999999999999985432211 100 0111 1112333335667888
Q ss_pred HHhcccccCCCCCCHHH
Q 040814 615 GLLCVHDQAVNRPTMAD 631 (664)
Q Consensus 615 ~~~Cl~~dP~~RPt~~e 631 (664)
+.+||+.||++||++.+
T Consensus 224 i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 224 ISGLLQKDPTKRLGSGG 240 (250)
T ss_pred HHHHhcCCHhhCCCccc
Confidence 89999999999999955
No 373
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.88 E-value=7.1e-23 Score=224.71 Aligned_cols=214 Identities=21% Similarity=0.324 Sum_probs=172.0
Q ss_pred ccHHHHHHHhcCccccceeccCCCcCEEEEEE-cCCcEEEEEeccc----------------------ceEEEEeEeec-
Q 040814 409 FNFQTIAAATNNFSTTNKLGEGGFGPVYKGKL-LDGQVIAVKRLSG----------------------RTIRLMGCSLH- 464 (664)
Q Consensus 409 ~~~~~i~~~t~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~----------------------~~v~l~g~~~~- 464 (664)
..++.+...++-|++.+.||.|.+|.||+++. ++++..|+|+++. +.+.++|++..
T Consensus 9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~ 88 (953)
T KOG0587|consen 9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKK 88 (953)
T ss_pred cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEe
Confidence 34455566778899999999999999999996 4589999998853 35788888764
Q ss_pred ----CCeeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc--------------
Q 040814 465 ----GAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN-------------- 526 (664)
Q Consensus 465 ----~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n-------------- 526 (664)
+++++||||||.+||.-+++.+.. ...+.|..+..|++++++||.+||....+|+|++..|
T Consensus 89 ~~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDF 167 (953)
T KOG0587|consen 89 DPGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDF 167 (953)
T ss_pred cCCCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeee
Confidence 578999999999999999996643 7789999999999999999999999999999988876
Q ss_pred ------------cccccccCCccchhhhcc-----CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcC
Q 040814 527 ------------TNRVVGTYGYMAPEYAMN-----GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEG 589 (664)
Q Consensus 527 ------------~~~~~Gt~~Y~APE~~~~-----~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 589 (664)
.+..+||+.|||||++.. ..|+..+|+||+|++..||--|.+|+...+....+-.+
T Consensus 168 GvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~I------- 240 (953)
T KOG0587|consen 168 GVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI------- 240 (953)
T ss_pred eeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccC-------
Confidence 345689999999999953 34788999999999999999999998655443322110
Q ss_pred ChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 590 KASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 590 ~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
...+...-.-+..-.+++.+++..|+.+|-++||++.++++
T Consensus 241 ----pRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 241 ----PRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred ----CCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 01111122235567788999999999999999999988874
No 374
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.88 E-value=1.4e-22 Score=216.86 Aligned_cols=198 Identities=21% Similarity=0.147 Sum_probs=160.4
Q ss_pred hcCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-------------------ceEEEEeEeecCCeeEEEEeccCC
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-------------------RTIRLMGCSLHGAERILVYEFMPN 477 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-------------------~~v~l~g~~~~~~~~~lV~Ey~~~ 477 (664)
+++|.....+|.|+|+.|-.+... +++..+||++.+ +++++.+.+.++.+.++|||++.+
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g 400 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDG 400 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccccccccccchhhhhcCCCcceeecceecCCceeeeeehhccc
Confidence 678888889999999999999874 488899998864 368999999999999999999999
Q ss_pred CchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccccc------------------------cccc
Q 040814 478 KSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTNR------------------------VVGT 533 (664)
Q Consensus 478 gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~~------------------------~~Gt 533 (664)
+-|.+-+. .......++..|+.+|+.++.|||.++.+|+|.++.|.-- .+-|
T Consensus 401 ~ell~ri~----~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~tp~~t 476 (612)
T KOG0603|consen 401 GELLRRIR----SKPEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCDTPALT 476 (612)
T ss_pred cHHHHHHH----hcchhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchhhcccchh
Confidence 98877763 2233337888899999999999999999999999988311 2346
Q ss_pred CCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHHH
Q 040814 534 YGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRCIH 613 (664)
Q Consensus 534 ~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~ 613 (664)
..|.|||++....|++++|+||||++||||++|+.||.....+ .++......+.+.........+
T Consensus 477 ~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~---------------~ei~~~i~~~~~s~~vS~~AKd 541 (612)
T KOG0603|consen 477 LQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG---------------IEIHTRIQMPKFSECVSDEAKD 541 (612)
T ss_pred hcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch---------------HHHHHhhcCCccccccCHHHHH
Confidence 6799999999999999999999999999999999999754433 1222233333333445556777
Q ss_pred HHHhcccccCCCCCCHHHHHH
Q 040814 614 AGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 614 l~~~Cl~~dP~~RPt~~evl~ 634 (664)
++.+||+.||.+||+|+++..
T Consensus 542 Ll~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 542 LLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred HHHHhccCChhhCcChhhhcc
Confidence 888899999999999999874
No 375
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.88 E-value=2.7e-22 Score=224.09 Aligned_cols=218 Identities=17% Similarity=0.183 Sum_probs=147.2
Q ss_pred HhcCccccceeccCCCcCEEEEEEcC--CcEEE------------------EEec---------------------ccce
Q 040814 417 ATNNFSTTNKLGEGGFGPVYKGKLLD--GQVIA------------------VKRL---------------------SGRT 455 (664)
Q Consensus 417 ~t~~~~~~~~lg~G~fg~Vy~~~~~~--~~~va------------------vK~~---------------------~~~~ 455 (664)
..++|++.+.||+|+||.||++..+. +...+ .|.+ ++++
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 45789999999999999999987532 11111 1211 2357
Q ss_pred EEEEeEeecCCeeEEEEeccCCCchhHHhhcccc--cCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc------
Q 040814 456 IRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVK--KKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------ 527 (664)
Q Consensus 456 v~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~--~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------ 527 (664)
+++++++.+++..++|+|++. ++|..++.+... ...........|+.||+.||.|||+.+++|+|+++.|.
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~ 304 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDG 304 (501)
T ss_pred CcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC
Confidence 899999999999999999985 567777643211 12334566778999999999999999999999999871
Q ss_pred ---------------------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCc-hhhhhhH
Q 040814 528 ---------------------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERP-LNLVGYL 585 (664)
Q Consensus 528 ---------------------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~-~~~~~~~ 585 (664)
....||..|+|||++.+..++.++|||||||++|||++|..++........ ..+....
T Consensus 305 ~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~ 384 (501)
T PHA03210 305 KIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKII 384 (501)
T ss_pred CEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHH
Confidence 123689999999999999999999999999999999998865432222111 1111100
Q ss_pred Hh----cC----ChhHhhhhhhCC-------CCCH-----HHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 586 WK----EG----KASELMEAALDG-------PCPE-----NELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 586 ~~----~~----~~~~~~d~~~~~-------~~~~-----~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
.. .. ....+.+..... ..+. .....+.+++.+|++.||.+|||+.|+++.
T Consensus 385 ~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 385 DSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred HhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 00 00 000111100000 0000 011235566788999999999999999864
No 376
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.88 E-value=3.8e-22 Score=229.85 Aligned_cols=103 Identities=19% Similarity=0.291 Sum_probs=89.7
Q ss_pred hcCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-------------------------ceEEEEeEeecCCeeEEE
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-------------------------RTIRLMGCSLHGAERILV 471 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~lV 471 (664)
.++|.+.++||+|+||.||+|... +++.||||++.. +++++++++......+||
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 367899999999999999999986 489999998853 258889899889999999
Q ss_pred EeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccc
Q 040814 472 YEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNES 523 (664)
Q Consensus 472 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~ 523 (664)
|||+++++|..++.. ...+++..++.|+.||+.||.|||+.+++|+|++
T Consensus 83 mEy~~g~~L~~li~~---~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLK 131 (669)
T cd05610 83 MEYLIGGDVKSLLHI---YGYFDEEMAVKYISEVALALDYLHRHGIIHRDLK 131 (669)
T ss_pred EeCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCcc
Confidence 999999999999943 4568999999999999999999999888887433
No 377
>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity. Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....
Probab=99.88 E-value=9e-24 Score=186.14 Aligned_cols=100 Identities=36% Similarity=0.543 Sum_probs=70.7
Q ss_pred CCeEEEccCCCCCCCC-CCceEEEEeCCCceEEEcCCCCcEEEe-ecccCC-ccceEEEeecccEEEEecC---------
Q 040814 84 KPPVWVANRNTPIFHK-ESASLTIDSKDGNLKILREGENPIAIS-SIQEGG-NVTRATLLQSGNFVLQEMN--------- 151 (664)
Q Consensus 84 ~tvVWvANr~~pv~~~-~~~~l~l~~~~G~L~l~~~~~~~vwss-~~~~~~-~~~~a~LldsGNlVl~~~~--------- 151 (664)
+||||+|||+.|+... ...+|.+.. ||+|+|.|.+++.+|++ ++.+.. ....|.|+|+|||||++..
T Consensus 2 ~tvvW~an~~~p~~~~s~~~~L~l~~-dGnLvl~~~~~~~iWss~~t~~~~~~~~~~~L~~~GNlvl~d~~~~~lW~Sf~ 80 (114)
T PF01453_consen 2 RTVVWVANRNSPLTSSSGNYTLILQS-DGNLVLYDSNGSVIWSSNNTSGRGNSGCYLVLQDDGNLVLYDSSGNVLWQSFD 80 (114)
T ss_dssp --------TTEEEEECETTEEEEEET-TSEEEEEETTTEEEEE--S-TTSS-SSEEEEEETTSEEEEEETTSEEEEESTT
T ss_pred cccccccccccccccccccccceECC-CCeEEEEcCCCCEEEEecccCCccccCeEEEEeCCCCEEEEeecceEEEeecC
Confidence 7999999999999531 248999999 99999999999999999 444333 5789999999999999854
Q ss_pred -CCCcccCCCceeeeccCCCeEEEEEecCCCCCC
Q 040814 152 -SDDTLLPGMKIGINLQTGHKWFLQSWIGGDSPA 184 (664)
Q Consensus 152 -PtDTlLPg~kl~~~~~tg~~~~L~Sw~s~~dps 184 (664)
||||+||+|+|+.+..+|.+..|+||++.+|||
T Consensus 81 ~ptdt~L~~q~l~~~~~~~~~~~~~sw~s~~dps 114 (114)
T PF01453_consen 81 YPTDTLLPGQKLGDGNVTGKNDSLTSWSSNTDPS 114 (114)
T ss_dssp SSS-EEEEEET--TSEEEEESTSSEEEESS----
T ss_pred CCccEEEeccCcccCCCccccceEEeECCCCCCC
Confidence 999999999999877777666799999999996
No 378
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.87 E-value=1e-22 Score=200.75 Aligned_cols=201 Identities=20% Similarity=0.326 Sum_probs=158.6
Q ss_pred HhcCccccceeccCCCcCEEEEEEcC-CcEEEEEecccc--------------------------eEEEEeEeecCCeeE
Q 040814 417 ATNNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSGR--------------------------TIRLMGCSLHGAERI 469 (664)
Q Consensus 417 ~t~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~~--------------------------~v~l~g~~~~~~~~~ 469 (664)
..++|.....||+|+|+.|..++++. .+.+|+|++++. +|.+..|+..+..++
T Consensus 248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf 327 (593)
T KOG0695|consen 248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF 327 (593)
T ss_pred ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence 34678889999999999999999854 899999999763 477888888999999
Q ss_pred EEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc-----------------------
Q 040814 470 LVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN----------------------- 526 (664)
Q Consensus 470 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n----------------------- 526 (664)
+|.||+++|+|-.++ .+...|+++.+..+..+|+.||.|||+.|++.+|++..|
T Consensus 328 fvieyv~ggdlmfhm---qrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~ 404 (593)
T KOG0695|consen 328 FVIEYVNGGDLMFHM---QRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGP 404 (593)
T ss_pred EEEEEecCcceeeeh---hhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCCC
Confidence 999999999997666 355789999999999999999999999999999887766
Q ss_pred ---cccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCC-chhhhhhHHhcCChhHhhhhhhCCC
Q 040814 527 ---TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEER-PLNLVGYLWKEGKASELMEAALDGP 602 (664)
Q Consensus 527 ---~~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~ 602 (664)
+...+||+.|+|||++.+..|...+|.|++||+++||+.|+.||+....+. ..+.-.|++ .-+++..+ .
T Consensus 405 gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylf-----qvilekqi--r 477 (593)
T KOG0695|consen 405 GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLF-----QVILEKQI--R 477 (593)
T ss_pred CcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHH-----HHHhhhcc--c
Confidence 466899999999999999999999999999999999999999997432221 112222221 11122222 2
Q ss_pred CCHHHHHHHHHHHHhcccccCCCCC
Q 040814 603 CPENELLRCIHAGLLCVHDQAVNRP 627 (664)
Q Consensus 603 ~~~~~~~~l~~l~~~Cl~~dP~~RP 627 (664)
+|.....+...+...-+.+||.+|.
T Consensus 478 iprslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 478 IPRSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred ccceeehhhHHHHHHhhcCCcHHhc
Confidence 3444444555666678999999984
No 379
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.87 E-value=3.1e-22 Score=213.23 Aligned_cols=200 Identities=19% Similarity=0.238 Sum_probs=164.5
Q ss_pred HhcCccccceeccCCCcCEEEEEEcC-CcEEEEEeccc------------------------ceEEEEeEeecCCeeEEE
Q 040814 417 ATNNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG------------------------RTIRLMGCSLHGAERILV 471 (664)
Q Consensus 417 ~t~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~------------------------~~v~l~g~~~~~~~~~lV 471 (664)
....|.+.+.||+|.|+.|.+|+... +..||||.+++ ++|+++.+...+..+++|
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence 35678889999999999999999754 89999998864 378999999999999999
Q ss_pred EeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc-------------------------
Q 040814 472 YEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN------------------------- 526 (664)
Q Consensus 472 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n------------------------- 526 (664)
|||+.+|.+++||. +...+....+..++.|+.++++|||+++++|+|++..|
T Consensus 134 ~eya~~ge~~~yl~---~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~ 210 (596)
T KOG0586|consen 134 MEYASGGELFDYLV---KHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLM 210 (596)
T ss_pred EEeccCchhHHHHH---hcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeeccccc
Confidence 99999999999994 45667778899999999999999999999999998877
Q ss_pred cccccccCCccchhhhccCCC-CccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCC--CC
Q 040814 527 TNRVVGTYGYMAPEYAMNGIV-SMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDG--PC 603 (664)
Q Consensus 527 ~~~~~Gt~~Y~APE~~~~~~~-s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~ 603 (664)
....+|++.|.|||++.+..| .+++|+||+|++||-|+.|..||++..-. ++-+..+.+ .+
T Consensus 211 lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk----------------~Lr~rvl~gk~rI 274 (596)
T KOG0586|consen 211 LQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLK----------------ELRPRVLRGKYRI 274 (596)
T ss_pred ccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccc----------------cccchheeeeecc
Confidence 234579999999999998775 58999999999999999999999754322 222222222 22
Q ss_pred CHHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 604 PENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 604 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
+.-...+|-+++.+.+-.+|.+|++++++.+.
T Consensus 275 p~~ms~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 275 PFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred cceeechhHHHHHHhhccCccccCCHHHhhhh
Confidence 33344556777777888999999999998643
No 380
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.87 E-value=9.4e-22 Score=216.20 Aligned_cols=213 Identities=16% Similarity=0.194 Sum_probs=141.5
Q ss_pred HhcCccccceeccCCCcCEEEEEE-----------------cCCcEEEEEecccc-------------------------
Q 040814 417 ATNNFSTTNKLGEGGFGPVYKGKL-----------------LDGQVIAVKRLSGR------------------------- 454 (664)
Q Consensus 417 ~t~~~~~~~~lg~G~fg~Vy~~~~-----------------~~~~~vavK~~~~~------------------------- 454 (664)
..++|++.++||+|+||.||+|.+ .+++.||||++...
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999964 23568999997421
Q ss_pred ----------------eEEEEeEeec--------CCeeEEEEeccCCCchhHHhhccc---------------------c
Q 040814 455 ----------------TIRLMGCSLH--------GAERILVYEFMPNKSLDFFIFDSV---------------------K 489 (664)
Q Consensus 455 ----------------~v~l~g~~~~--------~~~~~lV~Ey~~~gsL~~~l~~~~---------------------~ 489 (664)
.++++++|.. ....+|||||+++++|.++|+... .
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 1345555542 356899999999999999986421 1
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-------------------------c--cccccCCccchhhh
Q 040814 490 KKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-------------------------N--RVVGTYGYMAPEYA 542 (664)
Q Consensus 490 ~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-------------------------~--~~~Gt~~Y~APE~~ 542 (664)
...++|..+..|+.|++.||.|||+.+++|+|+++.|. . ...+|+.|+|||.+
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l 382 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEEL 382 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhh
Confidence 12457888999999999999999999999999998771 0 01236789999988
Q ss_pred ccCC--------------------C--CccchHHHHHHHHHHHHhCCC-CCCCCCCCCc-hhhhh---hHHhcCChhHhh
Q 040814 543 MNGI--------------------V--SMKADVFSFGVLLLEIVSGRK-NNNCYDEERP-LNLVG---YLWKEGKASELM 595 (664)
Q Consensus 543 ~~~~--------------------~--s~ksDVySfGvvL~ElltG~~-p~~~~~~~~~-~~~~~---~~~~~~~~~~~~ 595 (664)
.... + ..+.||||+||++|||++|.. |+........ ..... ..|.. ..
T Consensus 383 ~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~-----~~ 457 (507)
T PLN03224 383 VMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRM-----YK 457 (507)
T ss_pred cCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHh-----hc
Confidence 5422 1 235799999999999999875 5532111000 00000 00100 00
Q ss_pred hhhhCCCCCHHHHHHHHHHHHhcccccC---CCCCCHHHHHH
Q 040814 596 EAALDGPCPENELLRCIHAGLLCVHDQA---VNRPTMADVVS 634 (664)
Q Consensus 596 d~~~~~~~~~~~~~~l~~l~~~Cl~~dP---~~RPt~~evl~ 634 (664)
.....-+..........+++.+++..+| .+|+|++|+++
T Consensus 458 ~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 458 GQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred ccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 0000111111233456667777777655 78999999885
No 381
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.86 E-value=5.3e-22 Score=224.28 Aligned_cols=152 Identities=19% Similarity=0.252 Sum_probs=109.7
Q ss_pred eEEEEeccCCCchhHHhhcccccCCC-CHHHHHHHHHHHHHHHHHhhhcCcccccccccc--------------------
Q 040814 468 RILVYEFMPNKSLDFFIFDSVKKKQL-NWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN-------------------- 526 (664)
Q Consensus 468 ~~lV~Ey~~~gsL~~~l~~~~~~~~l-~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n-------------------- 526 (664)
+||-||||+.-.|.+++.++ ... .-...++++++|+.||+|+|+.+++|+|+||.|
T Consensus 671 LYIQMEyCE~~ll~~iI~~N---~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~ 747 (1351)
T KOG1035|consen 671 LYIQMEYCEKTLLRDIIRRN---HFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDL 747 (1351)
T ss_pred EEEEHhhhhhhHHHHHHHhc---ccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhh
Confidence 57889999998888888432 122 467789999999999999999999999999988
Q ss_pred ------------------------cccccccCCccchhhhccC---CCCccchHHHHHHHHHHHHhCCCCCCCCCCCCch
Q 040814 527 ------------------------TNRVVGTYGYMAPEYAMNG---IVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPL 579 (664)
Q Consensus 527 ------------------------~~~~~Gt~~Y~APE~~~~~---~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~ 579 (664)
.+..+||.-|+|||.+.+. .|+.|+|+||+||||+||+. ||. ...+..
T Consensus 748 ~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~--TsMERa 822 (1351)
T KOG1035|consen 748 KENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFG--TSMERA 822 (1351)
T ss_pred hhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCC--chHHHH
Confidence 2335799999999999764 49999999999999999986 342 111111
Q ss_pred hhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 580 NLVGYLWKEGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 580 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
..+..+ +.+....- ..+...+...-.+++.|.++.||.+|||+.|+++
T Consensus 823 ~iL~~L-R~g~iP~~------~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 823 SILTNL-RKGSIPEP------ADFFDPEHPEEASLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred HHHHhc-ccCCCCCC------cccccccchHHHHHHHHHhcCCCccCCCHHHHhh
Confidence 111111 11111110 1122234444567788899999999999999985
No 382
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.85 E-value=4.3e-21 Score=192.33 Aligned_cols=186 Identities=23% Similarity=0.255 Sum_probs=146.7
Q ss_pred CCcCEEEEEEcC-CcEEEEEeccc-----------------------ceEEEEeEeecCCeeEEEEeccCCCchhHHhhc
Q 040814 431 GFGPVYKGKLLD-GQVIAVKRLSG-----------------------RTIRLMGCSLHGAERILVYEFMPNKSLDFFIFD 486 (664)
Q Consensus 431 ~fg~Vy~~~~~~-~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~ 486 (664)
+||.||+|...+ ++.+|+|++.. +++++++++......++++||+++++|..++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 589999999865 89999999853 146778888888899999999999999999853
Q ss_pred ccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc-------------------------cccccccCCccchhh
Q 040814 487 SVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN-------------------------TNRVVGTYGYMAPEY 541 (664)
Q Consensus 487 ~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n-------------------------~~~~~Gt~~Y~APE~ 541 (664)
...+++..+..++.+++++|.|||+.+.+|.++++.| .....++..|++||.
T Consensus 81 ---~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~ 157 (244)
T smart00220 81 ---RGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEV 157 (244)
T ss_pred ---ccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHH
Confidence 2338999999999999999999999999999887765 122456788999999
Q ss_pred hccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCC--CHH---HHHHHHHHHH
Q 040814 542 AMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPC--PEN---ELLRCIHAGL 616 (664)
Q Consensus 542 ~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~---~~~~l~~l~~ 616 (664)
+.+..++.++||||||++++||++|..|+....... .+.+....... ... ....+.+++.
T Consensus 158 ~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 222 (244)
T smart00220 158 LLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLL---------------ELFKKIGKPKPPFPPPEWKISPEAKDLIR 222 (244)
T ss_pred HccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHH---------------HHHHHHhccCCCCccccccCCHHHHHHHH
Confidence 998889999999999999999999999985421111 11111111100 000 3456888999
Q ss_pred hcccccCCCCCCHHHHHH
Q 040814 617 LCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 617 ~Cl~~dP~~RPt~~evl~ 634 (664)
+||..+|++||++.++++
T Consensus 223 ~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 223 KLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHccCCchhccCHHHHhh
Confidence 999999999999999986
No 383
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.85 E-value=7.9e-22 Score=190.13 Aligned_cols=201 Identities=20% Similarity=0.320 Sum_probs=152.8
Q ss_pred cccceeccCCCcCEEEEEEcC-CcEEEEEecccc------------------------eEEEEeEeecCCeeEEEEeccC
Q 040814 422 STTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSGR------------------------TIRLMGCSLHGAERILVYEFMP 476 (664)
Q Consensus 422 ~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~~------------------------~v~l~g~~~~~~~~~lV~Ey~~ 476 (664)
+....||.|..|.|++++.+. |+.+|||.+... +|+.+||+..+....+.||.|.
T Consensus 95 ~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs 174 (391)
T KOG0983|consen 95 ENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMS 174 (391)
T ss_pred hhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHH
Confidence 345789999999999999865 899999999652 6999999999999999999985
Q ss_pred CCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhh-cCcccccccccc-------------------------cccc
Q 040814 477 NKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK-YSRLRMNESKVN-------------------------TNRV 530 (664)
Q Consensus 477 ~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~-~~~~h~d~~~~n-------------------------~~~~ 530 (664)
- -++.+|.. -.+++++...-++...+.+||.||.+ ++++|+|.+|.| .++.
T Consensus 175 ~-C~ekLlkr--ik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtrs 251 (391)
T KOG0983|consen 175 T-CAEKLLKR--IKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTRS 251 (391)
T ss_pred H-HHHHHHHH--hcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecccccccc
Confidence 3 44555532 24678999999999999999999985 789999999988 2334
Q ss_pred cccCCccchhhhc---cCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHH
Q 040814 531 VGTYGYMAPEYAM---NGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENE 607 (664)
Q Consensus 531 ~Gt~~Y~APE~~~---~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 607 (664)
.|.+.|||||.+. ...|+-++||||||++|+||.||+.||.....+ +..+.....+. . +.+... ...
T Consensus 252 AGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td--Fe~ltkvln~e--P----P~L~~~--~gF 321 (391)
T KOG0983|consen 252 AGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD--FEVLTKVLNEE--P----PLLPGH--MGF 321 (391)
T ss_pred cCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc--HHHHHHHHhcC--C----CCCCcc--cCc
Confidence 6889999999996 346899999999999999999999998754322 11111111100 0 111110 113
Q ss_pred HHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 608 LLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 608 ~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
...++++...||++|+.+||.-.++++.
T Consensus 322 Sp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 322 SPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred CHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 4567788888999999999999888753
No 384
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.85 E-value=2.5e-21 Score=204.66 Aligned_cols=205 Identities=19% Similarity=0.234 Sum_probs=161.6
Q ss_pred ccHHHHHHHh---cCccccceeccCCCcCEEEEEEc-CCcEEEEEecccc-------------------------eEEEE
Q 040814 409 FNFQTIAAAT---NNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSGR-------------------------TIRLM 459 (664)
Q Consensus 409 ~~~~~i~~~t---~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~-------------------------~v~l~ 459 (664)
..|-.|+.+. .-|..++.||-|+||+|.+++.- +...+|+|.+++. +|+|+
T Consensus 616 SnYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLy 695 (1034)
T KOG0608|consen 616 SNYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLY 695 (1034)
T ss_pred hhHHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEE
Confidence 3444454443 45778899999999999999864 4788999988752 59999
Q ss_pred eEeecCCeeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc-------------
Q 040814 460 GCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN------------- 526 (664)
Q Consensus 460 g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n------------- 526 (664)
-.+.+.+.+|+||||++||++-.+| .+.+.|.+..+..++.++..|+++.|+.|.+|+|+++.|
T Consensus 696 ySFQDkdnLYFVMdYIPGGDmMSLL---IrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTD 772 (1034)
T KOG0608|consen 696 YSFQDKDNLYFVMDYIPGGDMMSLL---IRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTD 772 (1034)
T ss_pred EEeccCCceEEEEeccCCccHHHHH---HHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeee
Confidence 9999999999999999999999998 456789999999999999999999999999999999988
Q ss_pred -------------------------------------------------------cccccccCCccchhhhccCCCCccc
Q 040814 527 -------------------------------------------------------TNRVVGTYGYMAPEYAMNGIVSMKA 551 (664)
Q Consensus 527 -------------------------------------------------------~~~~~Gt~~Y~APE~~~~~~~s~ks 551 (664)
....+||+.|+|||++....++..+
T Consensus 773 FGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~c 852 (1034)
T KOG0608|consen 773 FGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLC 852 (1034)
T ss_pred ccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccc
Confidence 1234799999999999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCC
Q 040814 552 DVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRP 627 (664)
Q Consensus 552 DVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP 627 (664)
|.||.|||||||+.|+.||-.....+.... -.++...++-...+....++..-+.++ |. +++.|.
T Consensus 853 dwws~gvil~em~~g~~pf~~~tp~~tq~k------v~nw~~~l~~~~~~~ls~e~~~li~kL---c~--sad~RL 917 (1034)
T KOG0608|consen 853 DWWSVGVILYEMLVGQPPFLADTPGETQYK------VINWRNFLHIPYQGNLSKEALDLIQKL---CC--SADSRL 917 (1034)
T ss_pred hhhHhhHHHHHHhhCCCCccCCCCCcceee------eeehhhccccccccccCHHHHHHHHHH---hc--Chhhhh
Confidence 999999999999999999976554433211 112233444444555556665555555 66 466664
No 385
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.84 E-value=8e-22 Score=200.75 Aligned_cols=205 Identities=23% Similarity=0.314 Sum_probs=151.9
Q ss_pred cCccccceeccCCCcCEEEEEE-cCCcEEEEEeccc-----------------------------ceEEEEeEee-cCCe
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKL-LDGQVIAVKRLSG-----------------------------RTIRLMGCSL-HGAE 467 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~-----------------------------~~v~l~g~~~-~~~~ 467 (664)
++|-...+||+|||+.||++.. ...+.||||+-+- ++|++++++. +.+.
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds 542 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS 542 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc
Confidence 4566778999999999999985 4478899997532 2799999885 5567
Q ss_pred eEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcC--cccccccccc-------------------
Q 040814 468 RILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYS--RLRMNESKVN------------------- 526 (664)
Q Consensus 468 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~--~~h~d~~~~n------------------- 526 (664)
+|-|+|||++.+|+.|| ...+.+++.++..|+.||+.||.||.+.. ++|-|++|.|
T Consensus 543 FCTVLEYceGNDLDFYL---KQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGL 619 (775)
T KOG1151|consen 543 FCTVLEYCEGNDLDFYL---KQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGL 619 (775)
T ss_pred ceeeeeecCCCchhHHH---HhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecch
Confidence 89999999999999999 45678999999999999999999999754 6777878776
Q ss_pred -----------------cccccccCCccchhhhcc----CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhH
Q 040814 527 -----------------TNRVVGTYGYMAPEYAMN----GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYL 585 (664)
Q Consensus 527 -----------------~~~~~Gt~~Y~APE~~~~----~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~ 585 (664)
+....||+.|++||.+.- ..++.|+||||.|||+|.++.|++||.........
T Consensus 620 SKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdI------ 693 (775)
T KOG1151|consen 620 SKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDI------ 693 (775)
T ss_pred hhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHH------
Confidence 233569999999998852 35899999999999999999999999754332211
Q ss_pred HhcCChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 586 WKEGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 586 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
..+..+...-+ +.-+..+....+...++.+||+..-++|....++..
T Consensus 694 LqeNTIlkAtE--VqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 694 LQENTILKATE--VQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred Hhhhchhccee--ccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 11111111100 011111122234455667799999999998877753
No 386
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.84 E-value=1.5e-20 Score=180.23 Aligned_cols=155 Identities=17% Similarity=0.085 Sum_probs=105.5
Q ss_pred CchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccc-------------ccccccccCCccchhhhcc
Q 040814 478 KSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKV-------------NTNRVVGTYGYMAPEYAMN 544 (664)
Q Consensus 478 gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~-------------n~~~~~Gt~~Y~APE~~~~ 544 (664)
|+|.+++.. ....++|.++..|+.||++||.|||+.+..+-..... ......||+.|||||++.+
T Consensus 1 GsL~~~l~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~kp~Nil~~~~~~~~~fG~~~~~~~~~~~g~~~y~aPE~~~~ 78 (176)
T smart00750 1 VSLADILEV--RGRPLNEEEIWAVCLQCLRALRELHRQAKSGNILLTWDGLLKLDGSVAFKTPEQSRVDPYFMAPEVIQG 78 (176)
T ss_pred CcHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccEeEcCccceeeccceEeeccccCCCcccccChHHhcC
Confidence 689999953 2456999999999999999999999876221100000 0122368999999999999
Q ss_pred CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHH--HHHHHHHhccccc
Q 040814 545 GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELL--RCIHAGLLCVHDQ 622 (664)
Q Consensus 545 ~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~l~~l~~~Cl~~d 622 (664)
..++.|+|||||||++|||++|+.||....... ............ .++ .....+..... .+.+++.+||+.+
T Consensus 79 ~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~--~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~i~~cl~~~ 152 (176)
T smart00750 79 QSYTEKADIYSLGITLYEALDYELPYNEERELS--AILEILLNGMPA---DDP-RDRSNLESVSAARSFADFMRVCASRL 152 (176)
T ss_pred CCCcchhhHHHHHHHHHHHHhCCCCccccchhc--HHHHHHHHHhcc---CCc-cccccHHHHHhhhhHHHHHHHHHhcc
Confidence 999999999999999999999999985432211 111100000000 000 00011112222 5888999999999
Q ss_pred CCCCCCHHHHHHHHhccc
Q 040814 623 AVNRPTMADVVSCLRQNN 640 (664)
Q Consensus 623 P~~RPt~~evl~~L~~~~ 640 (664)
|++||++.|+++.+....
T Consensus 153 p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 153 PQRREAANHYLAHCRALF 170 (176)
T ss_pred cccccCHHHHHHHHHHHH
Confidence 999999999999886543
No 387
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.84 E-value=3.2e-22 Score=206.99 Aligned_cols=201 Identities=20% Similarity=0.226 Sum_probs=161.1
Q ss_pred cCccccceeccCCCcCEEEEEEcCCc-EEEEEecccc-------------------------eEEEEeEeecCCeeEEEE
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLDGQ-VIAVKRLSGR-------------------------TIRLMGCSLHGAERILVY 472 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~~~-~vavK~~~~~-------------------------~v~l~g~~~~~~~~~lV~ 472 (664)
.+++.+..||-|+||.|=++..+... .+|+|.+++. +|+++.-+.+....|++|
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence 34555678999999999999885533 4888888652 578888888899999999
Q ss_pred eccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc-------------------------c
Q 040814 473 EFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN-------------------------T 527 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n-------------------------~ 527 (664)
|-|-||.|-..| +.++.++..+...++..+.+|++|||+++++.+|++|+| +
T Consensus 500 EaClGGElWTiL---rdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KT 576 (732)
T KOG0614|consen 500 EACLGGELWTIL---RDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKT 576 (732)
T ss_pred HhhcCchhhhhh---hhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccCCce
Confidence 999999999999 456889999999999999999999999999999999998 4
Q ss_pred ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHH
Q 040814 528 NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENE 607 (664)
Q Consensus 528 ~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 607 (664)
-+++||+.|.|||++.+...+.++|.||+|+++|||++|++||...+.....+++- + ..-.-.+|...
T Consensus 577 wTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~IL---k---------Gid~i~~Pr~I 644 (732)
T KOG0614|consen 577 WTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLIL---K---------GIDKIEFPRRI 644 (732)
T ss_pred eeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHH---h---------hhhhhhccccc
Confidence 45789999999999999999999999999999999999999998776555443331 1 11112334444
Q ss_pred HHHHHHHHHhcccccCCCCCC-----HHHHHH
Q 040814 608 LLRCIHAGLLCVHDQAVNRPT-----MADVVS 634 (664)
Q Consensus 608 ~~~l~~l~~~Cl~~dP~~RPt-----~~evl~ 634 (664)
.....+++.+.+..+|.+|.- +.+|-+
T Consensus 645 ~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkk 676 (732)
T KOG0614|consen 645 TKTATDLIKKLCRDNPTERLGYQKGGINDIKK 676 (732)
T ss_pred chhHHHHHHHHHhcCcHhhhccccCChHHHHh
Confidence 455566666667789999975 555543
No 388
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.83 E-value=6.4e-22 Score=190.17 Aligned_cols=206 Identities=22% Similarity=0.282 Sum_probs=152.2
Q ss_pred cccceeccCCCcCEEEEEEcC-CcEEEEEeccc------------------------ceEEEEeEeecCCeeEEEEeccC
Q 040814 422 STTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG------------------------RTIRLMGCSLHGAERILVYEFMP 476 (664)
Q Consensus 422 ~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~------------------------~~v~l~g~~~~~~~~~lV~Ey~~ 476 (664)
+....||.|.||+|+|-.++. |+.+|||+++. ++|+++|.+..+...++.||.|.
T Consensus 67 qdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd 146 (361)
T KOG1006|consen 67 QDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD 146 (361)
T ss_pred HHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh
Confidence 345889999999999998754 99999999963 26899999999999999999995
Q ss_pred CCchhHHhhc--ccccCCCCHHHHHHHHHHHHHHHHHhhh-cCccccccccccc-------------------------c
Q 040814 477 NKSLDFFIFD--SVKKKQLNWSKRITIIEGIAQGLIYLHK-YSRLRMNESKVNT-------------------------N 528 (664)
Q Consensus 477 ~gsL~~~l~~--~~~~~~l~~~~~~~I~~~ia~gL~yLH~-~~~~h~d~~~~n~-------------------------~ 528 (664)
-||+.+-.. ..+...+++...-.|..-+.+||.||.+ ..++|+|.+|.|. +
T Consensus 147 -~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT 225 (361)
T KOG1006|consen 147 -ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKT 225 (361)
T ss_pred -hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhh
Confidence 466654311 1345678999999999999999999985 6899999999982 2
Q ss_pred cccccCCccchhhhcc--CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHH
Q 040814 529 RVVGTYGYMAPEYAMN--GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPEN 606 (664)
Q Consensus 529 ~~~Gt~~Y~APE~~~~--~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 606 (664)
.-.|...|||||.+.. ..|+-+|||||+|++|||+.||+.|+...++. +..+.. ...++...+... .-..+
T Consensus 226 ~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~sv--feql~~-Vv~gdpp~l~~~----~~~~~ 298 (361)
T KOG1006|consen 226 VDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSV--FEQLCQ-VVIGDPPILLFD----KECVH 298 (361)
T ss_pred hccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHH--HHHHHH-HHcCCCCeecCc----ccccc
Confidence 2357788999999964 34899999999999999999999998754431 111110 111111111110 11112
Q ss_pred HHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 607 ELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 607 ~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
....+++.+-.|+-+|.++||...++.++
T Consensus 299 ~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 299 YSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred cCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 34456667777999999999999988754
No 389
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.83 E-value=1e-20 Score=185.56 Aligned_cols=155 Identities=26% Similarity=0.336 Sum_probs=127.1
Q ss_pred hcCccccceeccCCCcCEEEEEEcC-----CcEEEEEeccc------------------------ceEEEEeEeec-CCe
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLLD-----GQVIAVKRLSG------------------------RTIRLMGCSLH-GAE 467 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~~-----~~~vavK~~~~------------------------~~v~l~g~~~~-~~~ 467 (664)
...|+....||+|.||.||++.-++ .+.+|+|+++. +++.|...+.. +..
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK 102 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence 4568888999999999999996432 34799999864 34666666665 777
Q ss_pred eEEEEeccCCCchhHHhhcc--cccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc-------------------
Q 040814 468 RILVYEFMPNKSLDFFIFDS--VKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN------------------- 526 (664)
Q Consensus 468 ~~lV~Ey~~~gsL~~~l~~~--~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n------------------- 526 (664)
.+|++||.+. +|.+.|+-+ .+.+.++-.....|+.||+.|+.|||+.=++|+|++|.|
T Consensus 103 v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlG 181 (438)
T KOG0666|consen 103 VWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLG 181 (438)
T ss_pred EEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeeccc
Confidence 8999999987 677776432 234689999999999999999999999999999999998
Q ss_pred --------------cccccccCCccchhhhccC-CCCccchHHHHHHHHHHHHhCCCCCCCC
Q 040814 527 --------------TNRVVGTYGYMAPEYAMNG-IVSMKADVFSFGVLLLEIVSGRKNNNCY 573 (664)
Q Consensus 527 --------------~~~~~Gt~~Y~APE~~~~~-~~s~ksDVySfGvvL~ElltG~~p~~~~ 573 (664)
...++-|..|.|||.+.+. .||.+.|||+.|||+.||+|-++-|.+.
T Consensus 182 laR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~ 243 (438)
T KOG0666|consen 182 LARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGR 243 (438)
T ss_pred HHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccch
Confidence 1234567889999999874 5999999999999999999998888654
No 390
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.81 E-value=3.1e-19 Score=184.74 Aligned_cols=107 Identities=22% Similarity=0.291 Sum_probs=86.9
Q ss_pred hcCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc-----------------------------ceEEEEeEeec---
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG-----------------------------RTIRLMGCSLH--- 464 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~-----------------------------~~v~l~g~~~~--- 464 (664)
..+|.+.++||=|.|++||++... ..+.||+|+.+. .+|+|++.+.+
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp 156 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP 156 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence 367889999999999999999874 478999999863 16999999875
Q ss_pred -CCeeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhc-Ccccccccccc
Q 040814 465 -GAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKY-SRLRMNESKVN 526 (664)
Q Consensus 465 -~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~-~~~h~d~~~~n 526 (664)
+.+.+||+|+. |.+|..+|.. ...+-++...+.+|++||+.||.|||+. +++|.|++|+|
T Consensus 157 NG~HVCMVfEvL-GdnLLklI~~-s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPEN 218 (590)
T KOG1290|consen 157 NGQHVCMVFEVL-GDNLLKLIKY-SNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPEN 218 (590)
T ss_pred CCcEEEEEehhh-hhHHHHHHHH-hCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcce
Confidence 57899999998 5688888854 2456799999999999999999999975 45565444444
No 391
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.81 E-value=2e-20 Score=180.07 Aligned_cols=202 Identities=19% Similarity=0.262 Sum_probs=152.6
Q ss_pred cceeccCCCcCEEEEEEcCCcEEEEEecc------------------------cceEEEEeEeecCCeeEEEEeccCCCc
Q 040814 424 TNKLGEGGFGPVYKGKLLDGQVIAVKRLS------------------------GRTIRLMGCSLHGAERILVYEFMPNKS 479 (664)
Q Consensus 424 ~~~lg~G~fg~Vy~~~~~~~~~vavK~~~------------------------~~~v~l~g~~~~~~~~~lV~Ey~~~gs 479 (664)
..+|.+...|..|+|++. |..+++|++. ++++.++|.|....+..++..||+.||
T Consensus 195 ~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gs 273 (448)
T KOG0195|consen 195 ITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGS 273 (448)
T ss_pred hhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchH
Confidence 467889999999999984 4455666553 346788999999999999999999999
Q ss_pred hhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccc-----------ccccc---c---------cccccccCCc
Q 040814 480 LDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRM-----------NESKV---N---------TNRVVGTYGY 536 (664)
Q Consensus 480 L~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~-----------d~~~~---n---------~~~~~Gt~~Y 536 (664)
|...|++. .....+-.++.+++.+||+|++|||+...+-. |.... + .....-.+.|
T Consensus 274 lynvlhe~-t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfqe~gr~y~paw 352 (448)
T KOG0195|consen 274 LYNVLHEQ-TSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVGRAYSPAW 352 (448)
T ss_pred HHHHHhcC-ccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeeeccccccCccc
Confidence 99999874 34578889999999999999999998543211 11100 0 1112345789
Q ss_pred cchhhhccCCC---CccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHHH
Q 040814 537 MAPEYAMNGIV---SMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRCIH 613 (664)
Q Consensus 537 ~APE~~~~~~~---s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~ 613 (664)
|+||.++..+- -..+|+|||.++||||.|...||......+.- ..+.-..++..+|+.....+.+
T Consensus 353 mspealqrkped~n~raadmwsfaillwel~trevpfadlspmecg------------mkialeglrv~ippgis~hm~k 420 (448)
T KOG0195|consen 353 MSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECG------------MKIALEGLRVHIPPGISRHMNK 420 (448)
T ss_pred CCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhh------------hhhhhccccccCCCCccHHHHH
Confidence 99999986553 35889999999999999999999765544321 2233344555666666666777
Q ss_pred HHHhcccccCCCCCCHHHHHHHHhcc
Q 040814 614 AGLLCVHDQAVNRPTMADVVSCLRQN 639 (664)
Q Consensus 614 l~~~Cl~~dP~~RPt~~evl~~L~~~ 639 (664)
++.-|+.+||.+||.++.|+-.||..
T Consensus 421 lm~icmnedpgkrpkfdmivpilekm 446 (448)
T KOG0195|consen 421 LMNICMNEDPGKRPKFDMIVPILEKM 446 (448)
T ss_pred HHHHHhcCCCCcCCCcceehhhHHHh
Confidence 77779999999999999999999875
No 392
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.81 E-value=1.7e-20 Score=194.81 Aligned_cols=148 Identities=28% Similarity=0.308 Sum_probs=129.4
Q ss_pred cceeccCCCcCEEEEEEc-CCcEEEEEecccc------------------------eEEEEeEeecCCeeEEEEeccCCC
Q 040814 424 TNKLGEGGFGPVYKGKLL-DGQVIAVKRLSGR------------------------TIRLMGCSLHGAERILVYEFMPNK 478 (664)
Q Consensus 424 ~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~~------------------------~v~l~g~~~~~~~~~lV~Ey~~~g 478 (664)
.+.||+|.||+||-|..+ +|+.||||++++- +|.+...|...+..++|||-+.+
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G- 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG- 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc-
Confidence 478999999999999984 5999999999751 68888889999999999999965
Q ss_pred chhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc----------------------------cccc
Q 040814 479 SLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN----------------------------TNRV 530 (664)
Q Consensus 479 sL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n----------------------------~~~~ 530 (664)
+..++|.. ...+.|+++.-..++.||+.||.|||.++++|.|++|+| ...+
T Consensus 648 DMLEMILS-sEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsV 726 (888)
T KOG4236|consen 648 DMLEMILS-SEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSV 726 (888)
T ss_pred hHHHHHHH-hhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhh
Confidence 54455533 245789999999999999999999999999999999998 2446
Q ss_pred cccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 040814 531 VGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCY 573 (664)
Q Consensus 531 ~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~ 573 (664)
+||+.|+|||++.++.|+..-|+||.|||+|--++|..||...
T Consensus 727 VGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd 769 (888)
T KOG4236|consen 727 VGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED 769 (888)
T ss_pred cCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc
Confidence 8999999999999999999999999999999999999998643
No 393
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.80 E-value=2.8e-20 Score=203.62 Aligned_cols=198 Identities=24% Similarity=0.279 Sum_probs=147.5
Q ss_pred ccccceeccCCCc-CEEEEEEcCCcEEEEEec--------------------ccceEEEEeEeecCCeeEEEEeccCCCc
Q 040814 421 FSTTNKLGEGGFG-PVYKGKLLDGQVIAVKRL--------------------SGRTIRLMGCSLHGAERILVYEFMPNKS 479 (664)
Q Consensus 421 ~~~~~~lg~G~fg-~Vy~~~~~~~~~vavK~~--------------------~~~~v~l~g~~~~~~~~~lV~Ey~~~gs 479 (664)
|...+.+|.|+.| .||+|.. +|+.||||++ |+++||.++.-.+....||..|.|.. +
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~-s 588 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEEFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCAC-S 588 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhhHhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhh-h
Confidence 4456789999988 5799999 7889999988 34689999999999999999999965 9
Q ss_pred hhHHhhccccc-CCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc--------------------------------
Q 040814 480 LDFFIFDSVKK-KQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN-------------------------------- 526 (664)
Q Consensus 480 L~~~l~~~~~~-~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n-------------------------------- 526 (664)
|.+++...... ....-...+.+..|++.||++||+.+++|+|++|.|
T Consensus 589 L~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~ 668 (903)
T KOG1027|consen 589 LQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSF 668 (903)
T ss_pred HHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcchh
Confidence 99999542111 111113456788999999999999999999999988
Q ss_pred --cccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhC-CCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCC
Q 040814 527 --TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSG-RKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPC 603 (664)
Q Consensus 527 --~~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 603 (664)
.....||.||+|||.+....-+..+||+|+|||+|..++| ..||...-. ++.+.+ ... ..+. .-..
T Consensus 669 ~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~-R~~NIl----~~~--~~L~----~L~~ 737 (903)
T KOG1027|consen 669 SRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLE-RQANIL----TGN--YTLV----HLEP 737 (903)
T ss_pred hcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHH-hhhhhh----cCc--ccee----eecc
Confidence 1234589999999999998888899999999999999996 889853211 111111 000 0000 0000
Q ss_pred CHHHHHHHHHHHHhcccccCCCCCCHHHHH
Q 040814 604 PENELLRCIHAGLLCVHDQAVNRPTMADVV 633 (664)
Q Consensus 604 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl 633 (664)
..++ ...+++.+++..+|..||++.+|+
T Consensus 738 ~~d~--eA~dLI~~ml~~dP~~RPsa~~VL 765 (903)
T KOG1027|consen 738 LPDC--EAKDLISRMLNPDPQLRPSATDVL 765 (903)
T ss_pred CchH--HHHHHHHHhcCCCcccCCCHHHHh
Confidence 1111 566778889999999999999997
No 394
>cd00028 B_lectin Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.
Probab=99.80 E-value=4.5e-19 Score=157.57 Aligned_cols=103 Identities=35% Similarity=0.471 Sum_probs=88.1
Q ss_pred CcccCCCCcEEeCCCeEEEeecCCCCCCCeEEEEEecCCCCCCCCCCCeEEEccCCCCCCCCCCceEEEEeCCCceEEEc
Q 040814 38 QQLSDLDEPLVSASGKFMLGFFSPRFSTDKYLGIWYNRPAKESGYYKPPVWVANRNTPIFHKESASLTIDSKDGNLKILR 117 (664)
Q Consensus 38 ~~l~~~~~~lvS~~g~F~lGFf~~~~~~~~y~gIw~~~~~~~~~~~~tvVWvANr~~pv~~~~~~~l~l~~~~G~L~l~~ 117 (664)
++|+ ++++|+|+++.|++|||++......+.+|||.+ .+ +++||.|||+.|.. ..+.|.|.. ||+|+|.|
T Consensus 2 ~~l~-~~~~l~s~~~~f~~G~~~~~~q~~dgnlv~~~~-----~~-~~~vW~snt~~~~~--~~~~l~l~~-dGnLvl~~ 71 (116)
T cd00028 2 NPLS-SGQTLVSSGSLFELGFFKLIMQSRDYNLILYKG-----SS-RTVVWVANRDNPSG--SSCTLTLQS-DGNLVIYD 71 (116)
T ss_pred cCcC-CCCEEEeCCCcEEEecccCCCCCCeEEEEEEeC-----CC-CeEEEECCCCCCCC--CCEEEEEec-CCCeEEEc
Confidence 4677 789999999999999999875534899999987 33 68999999999953 568899998 99999999
Q ss_pred CCCCcEEEeecccCCccceEEEeecccEEEEec
Q 040814 118 EGENPIAISSIQEGGNVTRATLLQSGNFVLQEM 150 (664)
Q Consensus 118 ~~~~~vwss~~~~~~~~~~a~LldsGNlVl~~~ 150 (664)
.+|.+||+|++........|.|+|+|||||++.
T Consensus 72 ~~g~~vW~S~~~~~~~~~~~~L~ddGnlvl~~~ 104 (116)
T cd00028 72 GSGTVVWSSNTTRVNGNYVLVLLDDGNLVLYDS 104 (116)
T ss_pred CCCcEEEEecccCCCCceEEEEeCCCCEEEECC
Confidence 999999999986533467899999999999974
No 395
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.80 E-value=8.3e-21 Score=181.07 Aligned_cols=213 Identities=21% Similarity=0.348 Sum_probs=155.9
Q ss_pred CccccceeccCCCcCEEEEEEcC-CcEEEEEecc------------------------cceEEEEeEeec--------CC
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLS------------------------GRTIRLMGCSLH--------GA 466 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~------------------------~~~v~l~g~~~~--------~~ 466 (664)
.|....+||+|.||.||+++.++ |+.||+|++- ++++.++..|.. ..
T Consensus 18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~ 97 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRA 97 (376)
T ss_pred HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccc
Confidence 34556899999999999999855 7889988652 123445555543 23
Q ss_pred eeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-------------------
Q 040814 467 ERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------- 527 (664)
Q Consensus 467 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------- 527 (664)
..+||+.+|+. +|.-.|.+ ....++..++.+++.++..||.|+|+..++|+|.++.|.
T Consensus 98 t~ylVf~~ceh-DLaGlLsn--~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~f 174 (376)
T KOG0669|consen 98 TFYLVFDFCEH-DLAGLLSN--RKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAF 174 (376)
T ss_pred eeeeeHHHhhh-hHHHHhcC--ccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccce
Confidence 47899999986 88888843 246799999999999999999999999999999998871
Q ss_pred -----------ccccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhH--------Hh
Q 040814 528 -----------NRVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYL--------WK 587 (664)
Q Consensus 528 -----------~~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~--------~~ 587 (664)
++.+-|..|.+||.+.+ ..|+++.|||.-|||+.||+||.+-+....+...+.++..+ |.
T Consensus 175 s~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP 254 (376)
T KOG0669|consen 175 STSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWP 254 (376)
T ss_pred ecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCC
Confidence 12234788999999986 56999999999999999999999998877777776666542 33
Q ss_pred cCChhHhhhhhhCCCCCH-------HHH------HHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 588 EGKASELMEAALDGPCPE-------NEL------LRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 588 ~~~~~~~~d~~~~~~~~~-------~~~------~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
+-+..++....-..+.+. +.+ ...++++...+..||.+|+++++++..
T Consensus 255 ~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 255 NVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred CcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 333333333221111111 111 145566667889999999999998743
No 396
>smart00108 B_lectin Bulb-type mannose-specific lectin.
Probab=99.78 E-value=1.6e-18 Score=153.61 Aligned_cols=102 Identities=33% Similarity=0.510 Sum_probs=87.6
Q ss_pred CcccCCCCcEEeCCCeEEEeecCCCCCCCeEEEEEecCCCCCCCCCCCeEEEccCCCCCCCCCCceEEEEeCCCceEEEc
Q 040814 38 QQLSDLDEPLVSASGKFMLGFFSPRFSTDKYLGIWYNRPAKESGYYKPPVWVANRNTPIFHKESASLTIDSKDGNLKILR 117 (664)
Q Consensus 38 ~~l~~~~~~lvS~~g~F~lGFf~~~~~~~~y~gIw~~~~~~~~~~~~tvVWvANr~~pv~~~~~~~l~l~~~~G~L~l~~ 117 (664)
..|+ .+++|+|+++.|++|||.+... ..+.+|||+. .+ +++||+|||+.|+.+ +..|.+.. ||+|+|.|
T Consensus 2 ~~l~-~~~~l~s~~~~f~~G~~~~~~q-~dgnlV~~~~-----~~-~~~vW~snt~~~~~~--~~~l~l~~-dGnLvl~~ 70 (114)
T smart00108 2 NTLS-SGQTLVSGNSLFELGFFTLIMQ-NDYNLILYKS-----SS-RTVVWVANRDNPVSD--SCTLTLQS-DGNLVLYD 70 (114)
T ss_pred cccC-CCCEEecCCCcEeeeccccCCC-CCEEEEEEEC-----CC-CcEEEECCCCCCCCC--CEEEEEeC-CCCEEEEe
Confidence 4567 7899999999999999998644 7899999988 44 689999999999854 48899998 99999999
Q ss_pred CCCCcEEEeecccCCccceEEEeecccEEEEec
Q 040814 118 EGENPIAISSIQEGGNVTRATLLQSGNFVLQEM 150 (664)
Q Consensus 118 ~~~~~vwss~~~~~~~~~~a~LldsGNlVl~~~ 150 (664)
.+|.+||+|++........|.|+|+|||||++.
T Consensus 71 ~~g~~vW~S~t~~~~~~~~~~L~ddGnlvl~~~ 103 (114)
T smart00108 71 GDGRVVWSSNTTGANGNYVLVLLDDGNLVIYDS 103 (114)
T ss_pred CCCCEEEEecccCCCCceEEEEeCCCCEEEECC
Confidence 999999999886334467899999999999874
No 397
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.78 E-value=1.9e-19 Score=212.39 Aligned_cols=152 Identities=16% Similarity=0.161 Sum_probs=113.4
Q ss_pred CeeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccccc----------------
Q 040814 466 AERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTNR---------------- 529 (664)
Q Consensus 466 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~~---------------- 529 (664)
...++++||+ .++|.++|.. ....+++.+++.|+.||++||.|||+.+++|+|++|.|.--
T Consensus 53 ~~~~~~~e~~-~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~ 129 (793)
T PLN00181 53 DSIVRALECE-DVSLRQWLDN--PDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSD 129 (793)
T ss_pred chhhhhhccC-CccHHHHHhc--ccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCc
Confidence 4577889988 5599999953 24569999999999999999999999999999999987211
Q ss_pred ---------------------------------------------ccccCCccchhhhccCCCCccchHHHHHHHHHHHH
Q 040814 530 ---------------------------------------------VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIV 564 (664)
Q Consensus 530 ---------------------------------------------~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ell 564 (664)
.+||+.|||||++.+..++.++|||||||+||||+
T Consensus 130 ~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl 209 (793)
T PLN00181 130 SGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELF 209 (793)
T ss_pred ccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHh
Confidence 13577799999999999999999999999999999
Q ss_pred hCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 565 SGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 565 tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
+|..|+.... .... .+....+ .+.......+...++.+||+.+|.+||+|.||++.
T Consensus 210 ~~~~~~~~~~-----~~~~---------~~~~~~~-~~~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 210 CPVSSREEKS-----RTMS---------SLRHRVL-PPQILLNWPKEASFCLWLLHPEPSCRPSMSELLQS 265 (793)
T ss_pred hCCCchhhHH-----HHHH---------HHHHhhc-ChhhhhcCHHHHHHHHHhCCCChhhCcChHHHhhc
Confidence 9888753211 0000 0000001 01111123345677788999999999999999853
No 398
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.78 E-value=6.9e-19 Score=159.99 Aligned_cols=160 Identities=21% Similarity=0.339 Sum_probs=129.7
Q ss_pred CccccceeccCCCcCEEEEEEcC-CcEEEEEecc------------------------cceEEEEeEeecCCeeEEEEec
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLS------------------------GRTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~------------------------~~~v~l~g~~~~~~~~~lV~Ey 474 (664)
+|+..++||+|.||+||+|+..+ ++.||+|+++ +++|++++....+...-||+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 45667899999999999999755 8999999884 3589999999999999999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc--------------------------c
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT--------------------------N 528 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~--------------------------~ 528 (664)
|.. +|..|.. .-.+.++......++.|+++||.|+|++..+|+|.+|.|. .
T Consensus 83 cdq-dlkkyfd--slng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvrcys 159 (292)
T KOG0662|consen 83 CDQ-DLKKYFD--SLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYS 159 (292)
T ss_pred hhH-HHHHHHH--hcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEeee
Confidence 964 7777763 2357899999999999999999999999999999999871 1
Q ss_pred cccccCCccchhhhccC-CCCccchHHHHHHHHHHHHhCCCC-CCCCCCCCchhhh
Q 040814 529 RVVGTYGYMAPEYAMNG-IVSMKADVFSFGVLLLEIVSGRKN-NNCYDEERPLNLV 582 (664)
Q Consensus 529 ~~~Gt~~Y~APE~~~~~-~~s~ksDVySfGvvL~ElltG~~p-~~~~~~~~~~~~~ 582 (664)
.-+-|..|.+|.++.+. .|+...|+||-|||+.|+....+| |.+.+-++++..+
T Consensus 160 aevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkri 215 (292)
T KOG0662|consen 160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRI 215 (292)
T ss_pred ceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHH
Confidence 12356789999999875 589999999999999999985555 5444444444333
No 399
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.77 E-value=6.6e-18 Score=164.71 Aligned_cols=162 Identities=28% Similarity=0.447 Sum_probs=138.5
Q ss_pred eccCCCcCEEEEEEcC-CcEEEEEecccc-----------------------eEEEEeEeecCCeeEEEEeccCCCchhH
Q 040814 427 LGEGGFGPVYKGKLLD-GQVIAVKRLSGR-----------------------TIRLMGCSLHGAERILVYEFMPNKSLDF 482 (664)
Q Consensus 427 lg~G~fg~Vy~~~~~~-~~~vavK~~~~~-----------------------~v~l~g~~~~~~~~~lV~Ey~~~gsL~~ 482 (664)
||+|.+|.||++...+ ++.+++|++... ++++++++......++++||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999999865 899999988532 4778888888889999999999999999
Q ss_pred HhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc---------------------------ccccccCC
Q 040814 483 FIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT---------------------------NRVVGTYG 535 (664)
Q Consensus 483 ~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~---------------------------~~~~Gt~~ 535 (664)
++... ...+++..+..++.+++++|.|||+.+.+|.|+++.|. ....+...
T Consensus 81 ~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~ 158 (215)
T cd00180 81 LLKEN--EGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPA 158 (215)
T ss_pred HHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCC
Confidence 98432 14789999999999999999999999999998877661 11235668
Q ss_pred ccchhhhccC-CCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHHHH
Q 040814 536 YMAPEYAMNG-IVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRCIHA 614 (664)
Q Consensus 536 Y~APE~~~~~-~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l 614 (664)
|++||.+... ..+.++|+|++|++++|| ..+.++
T Consensus 159 ~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------------------~~~~~~ 193 (215)
T cd00180 159 YMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------------------PELKDL 193 (215)
T ss_pred ccChhHhcccCCCCchhhhHHHHHHHHHH---------------------------------------------HHHHHH
Confidence 9999999877 889999999999999998 456778
Q ss_pred HHhcccccCCCCCCHHHHHHH
Q 040814 615 GLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 615 ~~~Cl~~dP~~RPt~~evl~~ 635 (664)
+..|++.+|++||++.++++.
T Consensus 194 l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 194 IRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred HHHHhhCCcccCcCHHHHhhC
Confidence 888999999999999999864
No 400
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.76 E-value=1.5e-19 Score=193.16 Aligned_cols=205 Identities=20% Similarity=0.263 Sum_probs=157.0
Q ss_pred HhcCccccceeccCCCcCEEEEEEc-CCcEEEEEeccc----------------------ceEEEEeEeecCCeeEEEEe
Q 040814 417 ATNNFSTTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG----------------------RTIRLMGCSLHGAERILVYE 473 (664)
Q Consensus 417 ~t~~~~~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~----------------------~~v~l~g~~~~~~~~~lV~E 473 (664)
..++|.....+|.|.||.|||++.. .++..|+|+++- ++|.++|.+...+..++.||
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME 92 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME 92 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence 3467888999999999999999974 489999998852 35666777777888999999
Q ss_pred ccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc--------------------------c
Q 040814 474 FMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN--------------------------T 527 (664)
Q Consensus 474 y~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n--------------------------~ 527 (664)
||.+|+|.+.-+ -...+++.++...++...+||+|||+.+.+|+|++-.| .
T Consensus 93 ycgggslQdiy~---~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~Kr 169 (829)
T KOG0576|consen 93 YCGGGSLQDIYH---VTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKR 169 (829)
T ss_pred ecCCCcccceee---ecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhhhhh
Confidence 999999987653 35789999999999999999999999999999998877 2
Q ss_pred ccccccCCccchhhhc---cCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhh-hhCCCC
Q 040814 528 NRVVGTYGYMAPEYAM---NGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEA-ALDGPC 603 (664)
Q Consensus 528 ~~~~Gt~~Y~APE~~~---~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~ 603 (664)
....||+.|||||+.. .+.|..++|||+.|+...|+---++|.......+.+.+. .. ...++ .+++
T Consensus 170 ksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~Lm----Tk----S~~qpp~lkD-- 239 (829)
T KOG0576|consen 170 KSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLM----TK----SGFQPPTLKD-- 239 (829)
T ss_pred hcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHh----hc----cCCCCCcccC--
Confidence 3467999999999873 567999999999999999998888885443333222111 00 01111 1111
Q ss_pred CHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 604 PENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 604 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
+......+-+++..|+-++|.+|||++.++.
T Consensus 240 k~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 240 KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred CccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 2233444666667799999999999987653
No 401
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.75 E-value=1e-19 Score=175.35 Aligned_cols=210 Identities=21% Similarity=0.283 Sum_probs=151.3
Q ss_pred ccceeccCCCcCEEEEEEc-CCcEEEEEeccc------------ceEEEEeEeecC-----------------CeeEEEE
Q 040814 423 TTNKLGEGGFGPVYKGKLL-DGQVIAVKRLSG------------RTIRLMGCSLHG-----------------AERILVY 472 (664)
Q Consensus 423 ~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~~------------~~v~l~g~~~~~-----------------~~~~lV~ 472 (664)
..+.||-|.||.||.+..+ +|+.||+|++.. ..++++.++.++ ++.+++.
T Consensus 57 PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~T 136 (449)
T KOG0664|consen 57 PDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLT 136 (449)
T ss_pred CCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHH
Confidence 3478999999999999974 599999999854 134555555543 2456778
Q ss_pred eccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-------------------------
Q 040814 473 EFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------------- 527 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------------- 527 (664)
|.|.. +|...| .....|+-..+.-+..||++||+|||+.+++|+|+++.|.
T Consensus 137 ELmQS-DLHKII---VSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~ 212 (449)
T KOG0664|consen 137 ELMQS-DLHKII---VSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRL 212 (449)
T ss_pred HHHHh-hhhhee---ccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhhh
Confidence 88854 677666 3456788889999999999999999999999999999871
Q ss_pred --ccccccCCccchhhhccC-CCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHh----------
Q 040814 528 --NRVVGTYGYMAPEYAMNG-IVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASEL---------- 594 (664)
Q Consensus 528 --~~~~Gt~~Y~APE~~~~~-~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~---------- 594 (664)
+.-+-|-.|.|||.+++. .|+.+.||||.|||+.||+-.+.-|......+.+.++..+......+.+
T Consensus 213 hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H 292 (449)
T KOG0664|consen 213 NMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNH 292 (449)
T ss_pred hhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHH
Confidence 112346679999999985 5999999999999999999999999887777777666554333222221
Q ss_pred -hhhhhCC-C--------CCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHH
Q 040814 595 -MEAALDG-P--------CPENELLRCIHAGLLCVHDQAVNRPTMADVVSCL 636 (664)
Q Consensus 595 -~d~~~~~-~--------~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L 636 (664)
+....+. . .+...-.+.+.+.++.+..||++|.+..+.+..+
T Consensus 293 ~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 293 VLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred hhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 1111111 0 1112223344555667889999999988887654
No 402
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.75 E-value=1.5e-18 Score=177.65 Aligned_cols=155 Identities=25% Similarity=0.375 Sum_probs=133.5
Q ss_pred HHHHHhcCccccceeccCCCcCEEEEEEc----CCcEEEEEeccc---------------------ceEEEEeEeecCCe
Q 040814 413 TIAAATNNFSTTNKLGEGGFGPVYKGKLL----DGQVIAVKRLSG---------------------RTIRLMGCSLHGAE 467 (664)
Q Consensus 413 ~i~~~t~~~~~~~~lg~G~fg~Vy~~~~~----~~~~vavK~~~~---------------------~~v~l~g~~~~~~~ 467 (664)
.+....+.|..+++||+|.|++||++.+. ..+.||+|.+.. +++++.++...++.
T Consensus 30 ~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~ 109 (418)
T KOG1167|consen 30 DIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQ 109 (418)
T ss_pred hhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhhccCCe
Confidence 34555677899999999999999999863 368899998853 36899999999999
Q ss_pred eEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc---------------------
Q 040814 468 RILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN--------------------- 526 (664)
Q Consensus 468 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n--------------------- 526 (664)
.++|+||++.....++. ..++...+..+++.+.+||.++|+.|++|+|++|.|
T Consensus 110 v~ivlp~~~H~~f~~l~------~~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~ 183 (418)
T KOG1167|consen 110 VAIVLPYFEHDRFRDLY------RSLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRY 183 (418)
T ss_pred eEEEecccCccCHHHHH------hcCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHH
Confidence 99999999999988887 357789999999999999999999999999999887
Q ss_pred --------------------------------------------------cccccccCCccchhhhcc-CCCCccchHHH
Q 040814 527 --------------------------------------------------TNRVVGTYGYMAPEYAMN-GIVSMKADVFS 555 (664)
Q Consensus 527 --------------------------------------------------~~~~~Gt~~Y~APE~~~~-~~~s~ksDVyS 555 (664)
.....||+||.|||++.. ..-++++||||
T Consensus 184 d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws 263 (418)
T KOG1167|consen 184 DGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWS 263 (418)
T ss_pred HhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceee
Confidence 011349999999999976 44688999999
Q ss_pred HHHHHHHHHhCCCCCCCC
Q 040814 556 FGVLLLEIVSGRKNNNCY 573 (664)
Q Consensus 556 fGvvL~ElltG~~p~~~~ 573 (664)
-|||++-+++++.||...
T Consensus 264 ~GVI~Lslls~~~PFf~a 281 (418)
T KOG1167|consen 264 AGVILLSLLSRRYPFFKA 281 (418)
T ss_pred ccceeehhhccccccccC
Confidence 999999999999998643
No 403
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.75 E-value=1.1e-18 Score=183.53 Aligned_cols=150 Identities=22% Similarity=0.278 Sum_probs=132.2
Q ss_pred cCccccceeccCCCcCEEEEEEcC-CcEEEEEeccc---------------------------------ceEEEEeEeec
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG---------------------------------RTIRLMGCSLH 464 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~---------------------------------~~v~l~g~~~~ 464 (664)
.+|...+.+|+|+||.|+.+.++. ...|+||.+.+ |+++++.++.+
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 458888999999999999999865 67899998853 36899999999
Q ss_pred CCeeEEEEecc-CCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc-----------------
Q 040814 465 GAERILVYEFM-PNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN----------------- 526 (664)
Q Consensus 465 ~~~~~lV~Ey~-~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n----------------- 526 (664)
++..+|+||-. ++-+|++|| .....+++.+...|++||+.|+++||+.+++|+|++++|
T Consensus 641 dd~yyl~te~hg~gIDLFd~I---E~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsa 717 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFI---EFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSA 717 (772)
T ss_pred CCeeEEEecCCCCCcchhhhh---hccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccch
Confidence 99999999965 566999999 346789999999999999999999999999999999998
Q ss_pred -------cccccccCCccchhhhccCCC-CccchHHHHHHHHHHHHhCCCCCC
Q 040814 527 -------TNRVVGTYGYMAPEYAMNGIV-SMKADVFSFGVLLLEIVSGRKNNN 571 (664)
Q Consensus 527 -------~~~~~Gt~~Y~APE~~~~~~~-s~ksDVySfGvvL~ElltG~~p~~ 571 (664)
....+||.+|.|||++.+.+| ...-|||++|++||-++....||.
T Consensus 718 a~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 718 AYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred hhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 234689999999999999887 466799999999999999988874
No 404
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.73 E-value=5.2e-18 Score=160.02 Aligned_cols=211 Identities=14% Similarity=0.195 Sum_probs=153.1
Q ss_pred hcCccccceeccCCCcCEEEEEE-cCCcEEEEEeccc--------------------ceEEEEeEeecCC--eeEEEEec
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKL-LDGQVIAVKRLSG--------------------RTIRLMGCSLHGA--ERILVYEF 474 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~--------------------~~v~l~g~~~~~~--~~~lV~Ey 474 (664)
.++|++.+++|+|.++.||.|.. .+++.++||++++ |++++++...+.. ...||+||
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~ 116 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEY 116 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhh
Confidence 47899999999999999999984 5688999998864 4788888877653 45799999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc--------------------------cc
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN--------------------------TN 528 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n--------------------------~~ 528 (664)
+.+.+....- ..|+-..+..++.++++||.|+|+.|++|+|.+|.| -+
T Consensus 117 v~n~Dfk~ly------~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYn 190 (338)
T KOG0668|consen 117 VNNTDFKQLY------PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN 190 (338)
T ss_pred hccccHHHHh------hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCCceee
Confidence 9998876544 467888889999999999999999999999999988 12
Q ss_pred cccccCCccchhhhcc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCC-CCchhhhhhHHh---------------cCCh
Q 040814 529 RVVGTYGYMAPEYAMN-GIVSMKADVFSFGVLLLEIVSGRKNNNCYDE-ERPLNLVGYLWK---------------EGKA 591 (664)
Q Consensus 529 ~~~Gt~~Y~APE~~~~-~~~s~ksDVySfGvvL~ElltG~~p~~~~~~-~~~~~~~~~~~~---------------~~~~ 591 (664)
..+.+..|..||.+-+ ..|+..-|+|||||+|.+|+..+.||....+ .+++-.+..... ..+.
T Consensus 191 VRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~ 270 (338)
T KOG0668|consen 191 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQF 270 (338)
T ss_pred eeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhH
Confidence 2356677889999875 5688899999999999999999999865432 222211111110 1111
Q ss_pred hHhhhhhhCC-------CCCHH-HHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 592 SELMEAALDG-------PCPEN-ELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 592 ~~~~d~~~~~-------~~~~~-~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
..++....+. ..... ...+.++++-..+..|-.+|||+.|...
T Consensus 271 ~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 271 EDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred hhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 1111111110 00001 1245667777789999999999998763
No 405
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.73 E-value=3.9e-18 Score=158.68 Aligned_cols=157 Identities=25% Similarity=0.354 Sum_probs=129.0
Q ss_pred HHHhcCccccceeccCCCcCEEEEEE-cCCcEEEEEecccc------------------------eEEEEeEeecCCeeE
Q 040814 415 AAATNNFSTTNKLGEGGFGPVYKGKL-LDGQVIAVKRLSGR------------------------TIRLMGCSLHGAERI 469 (664)
Q Consensus 415 ~~~t~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~------------------------~v~l~g~~~~~~~~~ 469 (664)
....++......||+|++|.|-+-++ .+|+..|+|++... .|+++|....+...+
T Consensus 42 eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvw 121 (282)
T KOG0984|consen 42 EVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVW 121 (282)
T ss_pred ccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEE
Confidence 33445555678999999999999887 45999999998631 589999999999999
Q ss_pred EEEeccCCCchhHHhhcc-cccCCCCHHHHHHHHHHHHHHHHHhhh-cCccccccccccc--------------------
Q 040814 470 LVYEFMPNKSLDFFIFDS-VKKKQLNWSKRITIIEGIAQGLIYLHK-YSRLRMNESKVNT-------------------- 527 (664)
Q Consensus 470 lV~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~I~~~ia~gL~yLH~-~~~~h~d~~~~n~-------------------- 527 (664)
+.||.|. -||+.|-.+- .+...+++...-+|+..|.+||.|||+ ...+|+|.+|.|.
T Consensus 122 IcME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~ 200 (282)
T KOG0984|consen 122 ICMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLV 200 (282)
T ss_pred EeHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeeh
Confidence 9999995 4887775432 345689999999999999999999997 5789999999881
Q ss_pred -----ccccccCCccchhhhcc----CCCCccchHHHHHHHHHHHHhCCCCCCC
Q 040814 528 -----NRVVGTYGYMAPEYAMN----GIVSMKADVFSFGVLLLEIVSGRKNNNC 572 (664)
Q Consensus 528 -----~~~~Gt~~Y~APE~~~~----~~~s~ksDVySfGvvL~ElltG~~p~~~ 572 (664)
+.-.|.-.|||||.+.. ..|+-||||||+|+++.||.+++.|++.
T Consensus 201 dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~ 254 (282)
T KOG0984|consen 201 DSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES 254 (282)
T ss_pred hhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence 11236678999999853 4699999999999999999999999864
No 406
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.72 E-value=5.1e-17 Score=161.16 Aligned_cols=149 Identities=28% Similarity=0.364 Sum_probs=127.0
Q ss_pred ccccceeccCCCcCEEEEEEcC-CcEEEEEeccc-----------------------ceEEEEeEeecCCeeEEEEeccC
Q 040814 421 FSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG-----------------------RTIRLMGCSLHGAERILVYEFMP 476 (664)
Q Consensus 421 ~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~-----------------------~~v~l~g~~~~~~~~~lV~Ey~~ 476 (664)
|...+.||+|++|.||++...+ ++.+|+|.+.. +++++++++......++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 4567899999999999999865 89999998863 24678888888889999999999
Q ss_pred CCchhHHhhcccccCC-CCHHHHHHHHHHHHHHHHHhhhcCcccccccccc-----------------------c----c
Q 040814 477 NKSLDFFIFDSVKKKQ-LNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN-----------------------T----N 528 (664)
Q Consensus 477 ~gsL~~~l~~~~~~~~-l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n-----------------------~----~ 528 (664)
+++|.+++... .. +++.....++.+++.+|.|||+.+.+|.++++.| . .
T Consensus 81 ~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~ 157 (225)
T smart00221 81 GGDLFDYLRKK---GGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLK 157 (225)
T ss_pred CCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccccccc
Confidence 99999998532 23 8999999999999999999999999999877655 0 2
Q ss_pred cccccCCccchhhh-ccCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 040814 529 RVVGTYGYMAPEYA-MNGIVSMKADVFSFGVLLLEIVSGRKNNNC 572 (664)
Q Consensus 529 ~~~Gt~~Y~APE~~-~~~~~s~ksDVySfGvvL~ElltG~~p~~~ 572 (664)
...++..|++||.+ ....++.++|||+||++++||++|+.||..
T Consensus 158 ~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 158 TVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 34566789999998 667788899999999999999999999853
No 407
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.70 E-value=5.7e-18 Score=176.20 Aligned_cols=159 Identities=19% Similarity=0.195 Sum_probs=134.1
Q ss_pred HHhcCccccceeccCCCcCEEEEEEcC-CcEEEEEecccc---------------------------eEEEEeEeecCCe
Q 040814 416 AATNNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSGR---------------------------TIRLMGCSLHGAE 467 (664)
Q Consensus 416 ~~t~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~~---------------------------~v~l~g~~~~~~~ 467 (664)
..-+.|.+....|+|-|++|-+|.... |+.||||++.+| .++++-.+.+.++
T Consensus 429 ~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknH 508 (752)
T KOG0670|consen 429 LLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNH 508 (752)
T ss_pred hhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcce
Confidence 345688888999999999999999755 889999999875 2567777888999
Q ss_pred eEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccccc------------------
Q 040814 468 RILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTNR------------------ 529 (664)
Q Consensus 468 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~~------------------ 529 (664)
+|||+|-+ .-+|.+.|....+...|....+..++.|+..||..|.+-+++|.|++|.|.-.
T Consensus 509 LClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~ 587 (752)
T KOG0670|consen 509 LCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASFA 587 (752)
T ss_pred eEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCcccccc
Confidence 99999976 45899999665556678889999999999999999999999999999988311
Q ss_pred -------ccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCC
Q 040814 530 -------VVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDE 575 (664)
Q Consensus 530 -------~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~ 575 (664)
..-+..|.|||++.+.+|+...|+||.||+||||.||+.-|.+...
T Consensus 588 ~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TN 640 (752)
T KOG0670|consen 588 SENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTN 640 (752)
T ss_pred ccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCc
Confidence 1123459999999999999999999999999999999998865443
No 408
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.69 E-value=1.7e-17 Score=160.28 Aligned_cols=206 Identities=16% Similarity=0.223 Sum_probs=144.6
Q ss_pred cCccccceeccCCCcCEEEEEEcC-CcEEEEEecccceE----------------------EEE-eEeecCCeeEEEEec
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSGRTI----------------------RLM-GCSLHGAERILVYEF 474 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~~~v----------------------~l~-g~~~~~~~~~lV~Ey 474 (664)
+.|.+.+.||+|.||.+-+++++. .+.+++|.++...+ .-+ ..+...+..+.++||
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~ 103 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEF 103 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeecc
Confidence 568889999999999999999865 78999999876421 111 122334567899999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-----------------ccccc-----
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT-----------------NRVVG----- 532 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~-----------------~~~~G----- 532 (664)
+|.|+|..-+ ....+.+..-.+++.|++.||.|||+++.+|+|++.+|. +...|
T Consensus 104 aP~gdL~snv----~~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~ 179 (378)
T KOG1345|consen 104 APRGDLRSNV----EAAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKY 179 (378)
T ss_pred Cccchhhhhc----CcccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCceehh
Confidence 9999998877 335688888899999999999999999999999999882 11223
Q ss_pred ---cCCccchhhhcc---CC--CCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhh-HHhcCChhHhhhhhhCCCC
Q 040814 533 ---TYGYMAPEYAMN---GI--VSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGY-LWKEGKASELMEAALDGPC 603 (664)
Q Consensus 533 ---t~~Y~APE~~~~---~~--~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~ 603 (664)
+..|.|||.... +. ..+.+|||.||+++|.++||+.|++....++.. ...| .|..+....+.+. -..
T Consensus 180 ~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~-Y~~~~~w~~rk~~~~P~~--F~~- 255 (378)
T KOG1345|consen 180 LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKP-YWEWEQWLKRKNPALPKK--FNP- 255 (378)
T ss_pred hhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCch-HHHHHHHhcccCccCchh--hcc-
Confidence 246899998753 22 467899999999999999999999854433332 2222 3333333222111 111
Q ss_pred CHHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 604 PENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 604 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
...++.++..+-+..+|++|-...++.++
T Consensus 256 ---fs~~a~r~Fkk~lt~~~~drcki~~~kk~ 284 (378)
T KOG1345|consen 256 ---FSEKALRLFKKSLTPRFKDRCKIWTAKKM 284 (378)
T ss_pred ---cCHHHHHHHHHhcCCcccccchhHHHHHH
Confidence 22334445555788888888655555544
No 409
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.64 E-value=2.7e-16 Score=155.69 Aligned_cols=210 Identities=20% Similarity=0.168 Sum_probs=145.4
Q ss_pred cCccccceeccCCCcCEEEEEE-cCCcEEEEEecc------------------------cceEEEEeEeecC------Ce
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKL-LDGQVIAVKRLS------------------------GRTIRLMGCSLHG------AE 467 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~------------------------~~~v~l~g~~~~~------~~ 467 (664)
.+|.....+|.|.- .|-.+.. -.++.||+|++. +++++++.++.-. .+
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 34555677777776 4444432 137888888773 3468888877542 45
Q ss_pred eEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc---------------------
Q 040814 468 RILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN--------------------- 526 (664)
Q Consensus 468 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n--------------------- 526 (664)
.++|||||. .+|...+. -.++-.+...|..|++.|+.|||+.+++|+|++|.|
T Consensus 96 ~y~v~e~m~-~nl~~vi~-----~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~ 169 (369)
T KOG0665|consen 96 VYLVMELMD-ANLCQVIL-----MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTED 169 (369)
T ss_pred HHHHHHhhh-hHHHHHHH-----HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccC
Confidence 789999995 58888884 467888999999999999999999999999999988
Q ss_pred ----cccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHh---------------
Q 040814 527 ----TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWK--------------- 587 (664)
Q Consensus 527 ----~~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~--------------- 587 (664)
.+..+.|..|.|||++.+..+.+.+||||.||++.||++|+.-|.+.+.-++...+.....
T Consensus 170 ~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r 249 (369)
T KOG0665|consen 170 TDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVR 249 (369)
T ss_pred cccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHH
Confidence 1234567889999999988899999999999999999999998875443222211111000
Q ss_pred ---cCC-------hhHhh-hhhhCC--CCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 588 ---EGK-------ASELM-EAALDG--PCPENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 588 ---~~~-------~~~~~-d~~~~~--~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
+.. ..+.+ |..... +.+......+..++.++|-.+|++|-+++++++.
T Consensus 250 ~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 250 NYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred HHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 000 00000 000000 1111223345567778999999999999998864
No 410
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.48 E-value=1.2e-13 Score=148.84 Aligned_cols=184 Identities=19% Similarity=0.284 Sum_probs=130.7
Q ss_pred ccceEEEEeEeecCCeeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCc-ccccccccccc--
Q 040814 452 SGRTIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSR-LRMNESKVNTN-- 528 (664)
Q Consensus 452 ~~~~v~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~-~h~d~~~~n~~-- 528 (664)
+.++.+++|.+..+...++|.+||..|+|.+.+.. ....++|.-...++++|++||.|||..-+ .|...+..|..
T Consensus 6 h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~--~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd 83 (484)
T KOG1023|consen 6 HDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN--EDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLVD 83 (484)
T ss_pred hhhhhhheeeEecCCceEEEEeeecCccHHhHHhc--cccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccceee
Confidence 45788999999999999999999999999999964 35689999999999999999999997544 55544443310
Q ss_pred --------------------------cccccCCccchhhhccC-------CCCccchHHHHHHHHHHHHhCCCCCCCCCC
Q 040814 529 --------------------------RVVGTYGYMAPEYAMNG-------IVSMKADVFSFGVLLLEIVSGRKNNNCYDE 575 (664)
Q Consensus 529 --------------------------~~~Gt~~Y~APE~~~~~-------~~s~ksDVySfGvvL~ElltG~~p~~~~~~ 575 (664)
...-..-|.|||.+.+. ..+.+.||||||++++|+++.+.||.....
T Consensus 84 ~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~ 163 (484)
T KOG1023|consen 84 SRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNL 163 (484)
T ss_pred eeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccc
Confidence 01122358999999763 147789999999999999999999976433
Q ss_pred CCch-hhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhcccc
Q 040814 576 ERPL-NLVGYLWKEGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNNQ 641 (664)
Q Consensus 576 ~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~~ 641 (664)
.... ..+.++ .. .......+.+... .+....++.++..||..+|++||++++|-..++.+..
T Consensus 164 ~~~~~eii~~~-~~-~~~~~~rP~i~~~--~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 164 VEDPDEIILRV-KK-GGSNPFRPSIELL--NELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred cCChHHHHHHH-Hh-cCCCCcCcchhhh--hhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 3221 112111 11 0011111111100 0233368888999999999999999999999887764
No 411
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.47 E-value=1.1e-12 Score=138.58 Aligned_cols=210 Identities=16% Similarity=0.114 Sum_probs=151.0
Q ss_pred CccccceeccCCCcCEEEEEEcCC--cEEEEEecccc--------------------------eEEEEeEe-ecCCeeEE
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLLDG--QVIAVKRLSGR--------------------------TIRLMGCS-LHGAERIL 470 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~~~--~~vavK~~~~~--------------------------~v~l~g~~-~~~~~~~l 470 (664)
+|.+.++||+|+||.||++..... +.+|+|..... ..+++... ..+...++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 799999999999999999997553 57888866431 23344444 35567899
Q ss_pred EEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-----------------------
Q 040814 471 VYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT----------------------- 527 (664)
Q Consensus 471 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~----------------------- 527 (664)
||+.+ +.+|.++..... .+.++-.+..+|+.|++.+|++||+.|.+|+|++|.|.
T Consensus 99 VM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~ 176 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARR 176 (322)
T ss_pred EEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCcc
Confidence 99986 779998764332 57899999999999999999999999999999888760
Q ss_pred ------------------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcC
Q 040814 528 ------------------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEG 589 (664)
Q Consensus 528 ------------------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 589 (664)
....||..|++++...+...+.+.|+||++-++.|++.|..|+...............
T Consensus 177 ~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~---- 252 (322)
T KOG1164|consen 177 FKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKD---- 252 (322)
T ss_pred ccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHH----
Confidence 0123899999999999999999999999999999999999998544332221111000
Q ss_pred ChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhccc
Q 040814 590 KASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNN 640 (664)
Q Consensus 590 ~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 640 (664)
........ .....+.+.. ++...+-..+..++|....+...|++..
T Consensus 253 ~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~~~~~Pdy~~~~~~l~~~~ 298 (322)
T KOG1164|consen 253 PRKLLTDR--FGDLKPEEFA---KILEYIDSLDYEDKPDYEKLAELLKDVF 298 (322)
T ss_pred hhhhcccc--ccCCChHHHH---HHHHHhhccCCcCCCCHHHHHHHHHHHH
Confidence 00000000 1122233333 3333355578999999999998887665
No 412
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.39 E-value=1.3e-11 Score=128.19 Aligned_cols=211 Identities=24% Similarity=0.308 Sum_probs=150.6
Q ss_pred ccccceeccCCCcCEEEEEEcCCcEEEEEeccc--------------------------ceEEEEeEeecCCeeEEEEec
Q 040814 421 FSTTNKLGEGGFGPVYKGKLLDGQVIAVKRLSG--------------------------RTIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 421 ~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~--------------------------~~v~l~g~~~~~~~~~lV~Ey 474 (664)
|...+.||.|+|+.||++... +.+++|.+.. +++++...+......++++||
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 566789999999999999986 7888887742 257777777666668999999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc----------------------------
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN---------------------------- 526 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n---------------------------- 526 (664)
+.+++|.+++........+.......++.|++.++.|+|+.+.+|+|+++.|
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~ 159 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTS 159 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccc
Confidence 9999999776321111278999999999999999999999999999888765
Q ss_pred -----cccccccCCccchhhhcc---CCCCccchHHHHHHHHHHHHhCCCCCCCCCCC-CchhhhhhHHhcCChhHhhhh
Q 040814 527 -----TNRVVGTYGYMAPEYAMN---GIVSMKADVFSFGVLLLEIVSGRKNNNCYDEE-RPLNLVGYLWKEGKASELMEA 597 (664)
Q Consensus 527 -----~~~~~Gt~~Y~APE~~~~---~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~d~ 597 (664)
.....||..|+|||.+.+ ..++...|+||+|++++++++|..|+...... ............... ....
T Consensus 160 ~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 237 (384)
T COG0515 160 SIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP--SLAS 237 (384)
T ss_pred cccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc--cccc
Confidence 033468889999999987 57899999999999999999999996544321 001111111111100 0000
Q ss_pred hhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 598 ALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 598 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
.............+.+++..|+..+|..|.++.+....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 238 PLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred ccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 00000001122456677778999999999998877653
No 413
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.38 E-value=1.8e-13 Score=154.23 Aligned_cols=203 Identities=16% Similarity=0.168 Sum_probs=137.5
Q ss_pred ccceeccCCCcCEEEEEEc-CCcEEEEEecc----cc------------------------eEEEEeEeecCCeeEEEEe
Q 040814 423 TTNKLGEGGFGPVYKGKLL-DGQVIAVKRLS----GR------------------------TIRLMGCSLHGAERILVYE 473 (664)
Q Consensus 423 ~~~~lg~G~fg~Vy~~~~~-~~~~vavK~~~----~~------------------------~v~l~g~~~~~~~~~lV~E 473 (664)
....+|.|.+|.|+..... ..+..+.|... +. ++..+..+.+.....-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 3578999999988877642 23334444322 10 1111111122223334499
Q ss_pred ccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc---------------------------
Q 040814 474 FMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN--------------------------- 526 (664)
Q Consensus 474 y~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n--------------------------- 526 (664)
||++ +|..++. ....+.-.++..++.|+.+|+.|||+.|+.|+|+++.|
T Consensus 402 ~~~~-Dlf~~~~---~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~ 477 (601)
T KOG0590|consen 402 YCPY-DLFSLVM---SNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKN 477 (601)
T ss_pred cccH-HHHHHHh---cccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcchh
Confidence 9999 9999983 23478889999999999999999999999999999988
Q ss_pred ---cccccccCCccchhhhccCCCCc-cchHHHHHHHHHHHHhCCCCCCCCCCCCchh-hhhhHHhcCChhHhhhhhhCC
Q 040814 527 ---TNRVVGTYGYMAPEYAMNGIVSM-KADVFSFGVLLLEIVSGRKNNNCYDEERPLN-LVGYLWKEGKASELMEAALDG 601 (664)
Q Consensus 527 ---~~~~~Gt~~Y~APE~~~~~~~s~-ksDVySfGvvL~ElltG~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~ 601 (664)
...++|+..|+|||++.+..|.+ ..||||.|+++..|++|+.||......+... ...+. ....+. .-..
T Consensus 478 ~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~----~~~~~~--~~~~ 551 (601)
T KOG0590|consen 478 IHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYS----DQRNIF--EGPN 551 (601)
T ss_pred hhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccc----cccccc--cChH
Confidence 22356888999999999999875 5799999999999999999986543332210 00000 000000 0000
Q ss_pred CCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 602 PCPENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
........+...++.+.++.+|.+|-||++|++.
T Consensus 552 ~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 552 RLLSLLPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred HHHHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence 1112344556778888999999999999999864
No 414
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.35 E-value=2.8e-12 Score=122.50 Aligned_cols=154 Identities=18% Similarity=0.265 Sum_probs=128.8
Q ss_pred hcCccccceeccCCCcCEEEEEE-cCCcEEEEEecccc---------------------eEEEEeEeecCCeeEEEEecc
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKL-LDGQVIAVKRLSGR---------------------TIRLMGCSLHGAERILVYEFM 475 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~-~~~~~vavK~~~~~---------------------~v~l~g~~~~~~~~~lV~Ey~ 475 (664)
...|..+++||.|+||.+|.|.. .+|+.||||.-+.+ +.++.-+..++....||||..
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL 93 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL 93 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeecc
Confidence 46899999999999999999985 56999999987642 244556666778889999987
Q ss_pred CCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc-----------------------------
Q 040814 476 PNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN----------------------------- 526 (664)
Q Consensus 476 ~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n----------------------------- 526 (664)
+.||++... --...++..+.+-++-|++.-++|+|..+.+|+|++|.|
T Consensus 94 -GPsLEdLfn--fC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~ 170 (341)
T KOG1163|consen 94 -GPSLEDLFN--FCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTR 170 (341)
T ss_pred -CccHHHHHH--HHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhcccccc
Confidence 778888763 124578899999999999999999999999999999998
Q ss_pred -------cccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 040814 527 -------TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYD 574 (664)
Q Consensus 527 -------~~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~ 574 (664)
..+..||.+|.+--...+..-+.+-|+=|+|-+|...--|..|+++..
T Consensus 171 ~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglk 225 (341)
T KOG1163|consen 171 QHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLK 225 (341)
T ss_pred ccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccc
Confidence 233468899988777776677889999999999999999999997653
No 415
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.32 E-value=9.3e-13 Score=148.71 Aligned_cols=202 Identities=19% Similarity=0.199 Sum_probs=137.4
Q ss_pred CccccceeccCCCcCEEEEEEcCCcEEEEEecccce--E-----------------EEEeEe------ecCCeeEEEEec
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLLDGQVIAVKRLSGRT--I-----------------RLMGCS------LHGAERILVYEF 474 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~--v-----------------~l~g~~------~~~~~~~lV~Ey 474 (664)
++...+.||++.|=+|.+|+.++|. |+||++-++. + +.-.++ ......+||=+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy 102 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY 102 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence 4556789999999999999998887 8999885531 0 000111 112234566677
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc--------------------------
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN-------------------------- 528 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~-------------------------- 528 (664)
..+ +|.+.| ..+.-|..-+..-|+.|++.||.-+|+.++.|.|+|.+|.-
T Consensus 103 vkh-nLyDRl---STRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPa 178 (1431)
T KOG1240|consen 103 VKH-NLYDRL---STRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPA 178 (1431)
T ss_pred Hhh-hhhhhh---ccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCcc
Confidence 755 676666 34556777888899999999999999999999999998810
Q ss_pred -------cccccCCccchhhhcc----------CC-CCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHh-c
Q 040814 529 -------RVVGTYGYMAPEYAMN----------GI-VSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWK-E 588 (664)
Q Consensus 529 -------~~~Gt~~Y~APE~~~~----------~~-~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~-~ 588 (664)
+...-.+|+|||.+-. .. .+++-||||.||++.||++ |+++|. ..++..|.-. .
T Consensus 179 df~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~------LSQL~aYr~~~~ 252 (1431)
T KOG1240|consen 179 DFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFT------LSQLLAYRSGNA 252 (1431)
T ss_pred cceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCccc------HHHHHhHhccCc
Confidence 0011136999998743 12 6789999999999999999 566663 1233333222 1
Q ss_pred CChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhccc
Q 040814 589 GKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQNN 640 (664)
Q Consensus 589 ~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~~~ 640 (664)
...+.+++.. ++ ..+.++++.+++.||++|.++++.++.-+++.
T Consensus 253 ~~~e~~Le~I-ed-------~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~~ 296 (1431)
T KOG1240|consen 253 DDPEQLLEKI-ED-------VSLRNLILSMIQRDPSKRLSAEDYLQKYRGLV 296 (1431)
T ss_pred cCHHHHHHhC-cC-------ccHHHHHHHHHccCchhccCHHHHHHhhhccc
Confidence 1122222221 11 13567778899999999999999998865543
No 416
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.28 E-value=8.9e-12 Score=143.48 Aligned_cols=154 Identities=17% Similarity=0.203 Sum_probs=130.1
Q ss_pred HHHHHhcCccccceeccCCCcCEEEEEEcCCcEEEEEecccc----------------------eEEEEeEeecCCeeEE
Q 040814 413 TIAAATNNFSTTNKLGEGGFGPVYKGKLLDGQVIAVKRLSGR----------------------TIRLMGCSLHGAERIL 470 (664)
Q Consensus 413 ~i~~~t~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~----------------------~v~l~g~~~~~~~~~l 470 (664)
+++...+.|.+.+.||+|+||.||+|...+|+.||+|+=++. +..+..++.-.+.-+|
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~l 771 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYICLQVMERLKPQMLPSIMHISSAHVFQNASVL 771 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeeeehHHHHHhhchhhhcchHHHHHHHccCCccee
Confidence 344556788999999999999999999988999999987652 1222233334566789
Q ss_pred EEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc------------------------
Q 040814 471 VYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN------------------------ 526 (664)
Q Consensus 471 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n------------------------ 526 (664)
|+||.+.|+|.+++. ..+.++|...+.|+.|+++-++.||..+++|.|++|.|
T Consensus 772 v~ey~~~Gtlld~~N---~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~s 848 (974)
T KOG1166|consen 772 VSEYSPYGTLLDLIN---TNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRS 848 (974)
T ss_pred eeeccccccHHHhhc---cCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccc
Confidence 999999999999994 56789999999999999999999999999999999998
Q ss_pred -----------cccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCC
Q 040814 527 -----------TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKN 569 (664)
Q Consensus 527 -----------~~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p 569 (664)
-....+|-++-.+|...|.+++..+|-|.++.+++-|+.|+.-
T Consensus 849 iDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 849 IDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred eeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 1223467788899999999999999999999999999999753
No 417
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.27 E-value=4.5e-12 Score=143.20 Aligned_cols=183 Identities=19% Similarity=0.179 Sum_probs=122.0
Q ss_pred hcCccccceeccCCCcCEEEEEEcC-CcEEEEEecccceEEEEeEeecCCeeEEEEeccCCCchhHHhhcccccCCCCHH
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSGRTIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWS 496 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~~~v~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~ 496 (664)
.++|..++.|..|+||.||..+++. .+.+|+|+-++++| +.+...-.+..+.| |+-...+. .-+.++-.
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~kiNkq~li-lRnilt~a~npfvv------gDc~tllk---~~g~lPvd 151 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQNLI-LRNILTFAGNPFVV------GDCATLLK---NIGPLPVD 151 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcccccchh-hhccccccCCccee------chhhhhcc---cCCCCcch
Confidence 4678889999999999999999865 78899944443332 22221112223333 44444441 22334322
Q ss_pred HHHHHHHHHHHHHHHhhhcCcccccccccc-----------------------------------------cccccccCC
Q 040814 497 KRITIIEGIAQGLIYLHKYSRLRMNESKVN-----------------------------------------TNRVVGTYG 535 (664)
Q Consensus 497 ~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n-----------------------------------------~~~~~Gt~~ 535 (664)
. +.+++|||+.+++|+|.++.| ...++||+.
T Consensus 152 m--------vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPe 223 (1205)
T KOG0606|consen 152 M--------VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPE 223 (1205)
T ss_pred h--------hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCcc
Confidence 2 788999999999999999887 344689999
Q ss_pred ccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHHHHH
Q 040814 536 YMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRCIHAG 615 (664)
Q Consensus 536 Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~ 615 (664)
|+|||++..+.|..-+|.|++|+|+||.+-|+.||.+...++.+..+ ..+ ...-.+.......+..+++
T Consensus 224 yiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~v---isd--------~i~wpE~dea~p~Ea~dli 292 (1205)
T KOG0606|consen 224 YIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQV---ISD--------DIEWPEEDEALPPEAQDLI 292 (1205)
T ss_pred ccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhh---hhh--------hccccccCcCCCHHHHHHH
Confidence 99999999999999999999999999999999999876544433211 110 0000011112223344555
Q ss_pred HhcccccCCCCCCH
Q 040814 616 LLCVHDQAVNRPTM 629 (664)
Q Consensus 616 ~~Cl~~dP~~RPt~ 629 (664)
.+.++.+|..|--.
T Consensus 293 ~~LL~qnp~~Rlgt 306 (1205)
T KOG0606|consen 293 EQLLRQNPLCRLGT 306 (1205)
T ss_pred HHHHHhChHhhccc
Confidence 56788899999633
No 418
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.26 E-value=1.4e-11 Score=125.49 Aligned_cols=153 Identities=18% Similarity=0.133 Sum_probs=105.9
Q ss_pred eeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc-------------------
Q 040814 467 ERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT------------------- 527 (664)
Q Consensus 467 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~------------------- 527 (664)
..+|||.-.+. +|..|+. ....+...+.-|+.|+++|+.|||++++.|+|.|..|.
T Consensus 317 tlylvMkrY~~-tLr~yl~----~~~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGC 391 (598)
T KOG4158|consen 317 TLYLVMKRYRQ-TLREYLW----TRHRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGC 391 (598)
T ss_pred eEEEehhcchh-hHHHHHh----cCCCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccce
Confidence 45788887654 8888883 34667778888999999999999999999999998871
Q ss_pred -----------------ccccccCCccchhhhccC--C----CCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhh
Q 040814 528 -----------------NRVVGTYGYMAPEYAMNG--I----VSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGY 584 (664)
Q Consensus 528 -----------------~~~~Gt~~Y~APE~~~~~--~----~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~ 584 (664)
-..-|.-.-||||+.... + --.|+|.|+.|.+.||+++...||....+. .+....
T Consensus 392 cLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem-~L~~r~- 469 (598)
T KOG4158|consen 392 CLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEM-LLDTRT- 469 (598)
T ss_pred eeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchh-eechhh-
Confidence 011255568999998642 2 236999999999999999999999653221 111111
Q ss_pred HHhcCChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHH
Q 040814 585 LWKEGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCL 636 (664)
Q Consensus 585 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L 636 (664)
+.+ ..-...+......+.+++...++.||++||+..-....|
T Consensus 470 -Yqe---------~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 470 -YQE---------SQLPALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred -hhh---------hhCCCCcccCChHHHHHHHHHhcCCccccCCccHHHhHH
Confidence 111 111223334444566677778999999999865444443
No 419
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.25 E-value=4.5e-12 Score=136.81 Aligned_cols=142 Identities=25% Similarity=0.287 Sum_probs=117.2
Q ss_pred eeccCCCcCEEEEEE----cCCcEEEEEecccc-------------------------eEEEEeEeecCCeeEEEEeccC
Q 040814 426 KLGEGGFGPVYKGKL----LDGQVIAVKRLSGR-------------------------TIRLMGCSLHGAERILVYEFMP 476 (664)
Q Consensus 426 ~lg~G~fg~Vy~~~~----~~~~~vavK~~~~~-------------------------~v~l~g~~~~~~~~~lV~Ey~~ 476 (664)
.+|+|.||.|++++- +.++.+|+|.+.+. +|++.-.+..+...+++++|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 378999999998652 34778888877542 4667677777888999999999
Q ss_pred CCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc----------------------cccccccC
Q 040814 477 NKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN----------------------TNRVVGTY 534 (664)
Q Consensus 477 ~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n----------------------~~~~~Gt~ 534 (664)
+|.|...+ .+...+++.........++-+++++|+.+++++|.++.| .+..+||.
T Consensus 81 gg~lft~l---~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~ 157 (612)
T KOG0603|consen 81 GGDLFTRL---SKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTY 157 (612)
T ss_pred cchhhhcc---ccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhhcccch
Confidence 99998877 345678888888888999999999999999999887776 12237899
Q ss_pred CccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 040814 535 GYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNC 572 (664)
Q Consensus 535 ~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~ 572 (664)
.|||||++. .....+|.||||++++||+||..||..
T Consensus 158 eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 158 EYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred hhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 999999998 567899999999999999999999864
No 420
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.24 E-value=4.3e-12 Score=134.41 Aligned_cols=96 Identities=21% Similarity=0.306 Sum_probs=85.8
Q ss_pred eeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc--------------------
Q 040814 467 ERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN-------------------- 526 (664)
Q Consensus 467 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n-------------------- 526 (664)
..++.|++|.-.+|.+||..+......++.....++.|++.|++| ++.+|+|.++.|
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~ 406 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQ 406 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeec
Confidence 467999999999999999766666788999999999999999999 888888887766
Q ss_pred ------------cccccccCCccchhhhccCCCCccchHHHHHHHHHHHHh
Q 040814 527 ------------TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVS 565 (664)
Q Consensus 527 ------------~~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~Ellt 565 (664)
.+..+||..||+||.+.+..|+.|+||||+|++|+|++.
T Consensus 407 ~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 407 DKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred ccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 233468999999999999999999999999999999998
No 421
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.23 E-value=1.9e-11 Score=122.04 Aligned_cols=152 Identities=20% Similarity=0.322 Sum_probs=127.4
Q ss_pred CccccceeccCCCcCEEEEE-EcCCcEEEEEecccc---------------------eEEEEeEeecCCeeEEEEeccCC
Q 040814 420 NFSTTNKLGEGGFGPVYKGK-LLDGQVIAVKRLSGR---------------------TIRLMGCSLHGAERILVYEFMPN 477 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~-~~~~~~vavK~~~~~---------------------~v~l~g~~~~~~~~~lV~Ey~~~ 477 (664)
+|.+.++||+|.||.+|.|+ +-+++.||||.-... +-..+-+-.++.+.+||+|.. +
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL-G 107 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL-G 107 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-C
Confidence 68889999999999999998 356999999965321 344555556677889999987 6
Q ss_pred CchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc-------------------------------
Q 040814 478 KSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN------------------------------- 526 (664)
Q Consensus 478 gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n------------------------------- 526 (664)
-||+++. + .-...++..++.-||.|+..-++|+|++..+-+|++|.|
T Consensus 108 PSLEDLF-D-~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~Tk 185 (449)
T KOG1165|consen 108 PSLEDLF-D-LCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTK 185 (449)
T ss_pred cCHHHHH-H-HhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCcccc
Confidence 7888875 2 235689999999999999999999999999999999988
Q ss_pred -------cccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 040814 527 -------TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYD 574 (664)
Q Consensus 527 -------~~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~ 574 (664)
.....||.+||+-....+..-+.+-|.=|+|-++...+-|..|+.+..
T Consensus 186 qHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLK 240 (449)
T KOG1165|consen 186 QHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK 240 (449)
T ss_pred ccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccccc
Confidence 123458999999888888888999999999999999999999997643
No 422
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.20 E-value=6.1e-11 Score=120.49 Aligned_cols=186 Identities=17% Similarity=0.209 Sum_probs=120.3
Q ss_pred cccceeccCCCcCEEEEEEcC-CcEEEEEecccc-----------------------------------------eEEEE
Q 040814 422 STTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSGR-----------------------------------------TIRLM 459 (664)
Q Consensus 422 ~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~~-----------------------------------------~v~l~ 459 (664)
...+.||.|+++.||.+++.+ ++.+|||++.-. ++++-
T Consensus 15 ~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~ 94 (288)
T PF14531_consen 15 VRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIP 94 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEET
T ss_pred EEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEc
Confidence 446899999999999999865 999999987310 11111
Q ss_pred e---EeecC---C-----eeEEEEeccCCCchhHHhhc---ccc-cCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccc
Q 040814 460 G---CSLHG---A-----ERILVYEFMPNKSLDFFIFD---SVK-KKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESK 524 (664)
Q Consensus 460 g---~~~~~---~-----~~~lV~Ey~~~gsL~~~l~~---~~~-~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~ 524 (664)
+ +.... . +.+++|+-+ .++|..++.- ... ...+....++.+..|+.+-+++||+.|.+|.|+++
T Consensus 95 ~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~~ 173 (288)
T PF14531_consen 95 GKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIKP 173 (288)
T ss_dssp TS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-SG
T ss_pred CCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccce
Confidence 0 01111 1 346788887 4688877532 111 12344566778889999999999999999999999
Q ss_pred ccc-----------------------ccccccCCccchhhhcc--------CCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 040814 525 VNT-----------------------NRVVGTYGYMAPEYAMN--------GIVSMKADVFSFGVLLLEIVSGRKNNNCY 573 (664)
Q Consensus 525 ~n~-----------------------~~~~Gt~~Y~APE~~~~--------~~~s~ksDVySfGvvL~ElltG~~p~~~~ 573 (664)
.|. .....+..|.+||.... -.++.+.|.|++|+++|.|.++..||...
T Consensus 174 ~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~ 253 (288)
T PF14531_consen 174 ENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLS 253 (288)
T ss_dssp GGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCC
T ss_pred eeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCC
Confidence 881 00234567999997743 24789999999999999999999998754
Q ss_pred CCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCC
Q 040814 574 DEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNR 626 (664)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~R 626 (664)
........ . -..|. +.++.+..++...|+.+|++|
T Consensus 254 ~~~~~~~~----------------~-f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 254 SPEADPEW----------------D-FSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp GGGSTSGG----------------G-GTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred Cccccccc----------------c-chhcC-CcCHHHHHHHHHHccCCcccC
Confidence 32211100 1 12344 556667777788999999988
No 423
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.17 E-value=5.7e-11 Score=125.86 Aligned_cols=98 Identities=19% Similarity=0.196 Sum_probs=75.1
Q ss_pred HHHhcCccccceeccCCCcCEEEEEEc--CCcEEEEEeccc---------------------------ceE-EEEeEeec
Q 040814 415 AAATNNFSTTNKLGEGGFGPVYKGKLL--DGQVIAVKRLSG---------------------------RTI-RLMGCSLH 464 (664)
Q Consensus 415 ~~~t~~~~~~~~lg~G~fg~Vy~~~~~--~~~~vavK~~~~---------------------------~~v-~l~g~~~~ 464 (664)
....++|...+.||+|+||.||+|..+ +++.||||++.. +++ +++.
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---- 89 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---- 89 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE----
Confidence 445678999999999999999999874 477889998531 123 2332
Q ss_pred CCeeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccc-cccc
Q 040814 465 GAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNE-SKVN 526 (664)
Q Consensus 465 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~-~~~n 526 (664)
....+||||||++++|.... ... ...++.++++||.|||+.+++|+|+ +|.|
T Consensus 90 ~~~~~LVmE~~~G~~L~~~~----~~~------~~~~~~~i~~aL~~lH~~gIiHrDL~KP~N 142 (365)
T PRK09188 90 TGKDGLVRGWTEGVPLHLAR----PHG------DPAWFRSAHRALRDLHRAGITHNDLAKPQN 142 (365)
T ss_pred cCCcEEEEEccCCCCHHHhC----ccc------hHHHHHHHHHHHHHHHHCCCeeCCCCCcce
Confidence 24579999999999996321 111 1467899999999999999999999 8887
No 424
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.04 E-value=4.7e-10 Score=108.86 Aligned_cols=101 Identities=20% Similarity=0.218 Sum_probs=77.7
Q ss_pred cceeccCCCcCEEEEEEcCCcEEEEEecccceE-------------EE---------------------------E--e-
Q 040814 424 TNKLGEGGFGPVYKGKLLDGQVIAVKRLSGRTI-------------RL---------------------------M--G- 460 (664)
Q Consensus 424 ~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~v-------------~l---------------------------~--g- 460 (664)
...||+|+||.||+|..++|+.||||++++... ++ . +
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 368999999999999988899999999864211 00 0 0
Q ss_pred ---EeecCCeeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHh-hhcCccccccccccc
Q 040814 461 ---CSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYL-HKYSRLRMNESKVNT 527 (664)
Q Consensus 461 ---~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yL-H~~~~~h~d~~~~n~ 527 (664)
........+|||||++++++...+. ....++..+...++.|++.+|.|| |+.+++|+|++|.|.
T Consensus 82 ~~p~~~~~~~~~iVmE~i~g~~l~~~~~---~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NI 149 (190)
T cd05147 82 PCPEPILLKSHVLVMEFIGDDGWAAPRL---KDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNL 149 (190)
T ss_pred CCCcEEEecCCEEEEEEeCCCCCcchhh---hcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHE
Confidence 0000122379999999988765532 235789999999999999999999 699999999999885
No 425
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.01 E-value=5.1e-10 Score=110.47 Aligned_cols=136 Identities=15% Similarity=0.077 Sum_probs=95.4
Q ss_pred HhcCccccceeccCCCcCEEEEEEcCCcEEEEEecccc-------------------------------eEEEEeEee--
Q 040814 417 ATNNFSTTNKLGEGGFGPVYKGKLLDGQVIAVKRLSGR-------------------------------TIRLMGCSL-- 463 (664)
Q Consensus 417 ~t~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~-------------------------------~v~l~g~~~-- 463 (664)
..++|...+.+|.|+||.||+... ++..+|||.+++. +..+..+..
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 367999999999999999999765 5778999999632 122222222
Q ss_pred ------cCCeeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccccccc------
Q 040814 464 ------HGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTNRVV------ 531 (664)
Q Consensus 464 ------~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~~~~------ 531 (664)
.....+|||||++|.+|.++. .++. ....+|+.+|..||+.+.+|.|.+|.|.-...
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~-------~~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~gi~li 176 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMP-------EISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNGLRII 176 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhh-------hccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCCEEEE
Confidence 124578999999999998764 1222 34669999999999999999999998832110
Q ss_pred ---ccCCccc----hhhhccCCCCccchHHHHHHHHHHHH
Q 040814 532 ---GTYGYMA----PEYAMNGIVSMKADVFSFGVLLLEIV 564 (664)
Q Consensus 532 ---Gt~~Y~A----PE~~~~~~~s~ksDVySfGvvL~Ell 564 (664)
+...+.- ..++....+..++|+||||+++.-..
T Consensus 177 Dfg~~~~~~e~~a~d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 177 DLSGKRCTAQRKAKDRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred ECCCcccccchhhHHHHHHHhHhcccccccceeEeehHHH
Confidence 1111111 11334456778999999999987654
No 426
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=98.97 E-value=1.7e-09 Score=105.07 Aligned_cols=101 Identities=19% Similarity=0.196 Sum_probs=76.5
Q ss_pred cceeccCCCcCEEEEEEcCCcEEEEEecccceEEE-------------EeE-----------------------------
Q 040814 424 TNKLGEGGFGPVYKGKLLDGQVIAVKRLSGRTIRL-------------MGC----------------------------- 461 (664)
Q Consensus 424 ~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~v~l-------------~g~----------------------------- 461 (664)
...||+|+||.||+|...+|+.||||++++..... ...
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 46899999999999998789999999987531100 000
Q ss_pred ----eecCCeeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhh-cCccccccccccc
Q 040814 462 ----SLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK-YSRLRMNESKVNT 527 (664)
Q Consensus 462 ----~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~-~~~~h~d~~~~n~ 527 (664)
.....+.+|||||++++++..... ....++......|+.|++.+|.+||+ .+++|+|++|.|.
T Consensus 82 ~~p~~~~~~~~~lVmE~~~g~~~~~~~l---~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NI 149 (190)
T cd05145 82 PVPEPILLKKNVLVMEFIGDDGSPAPRL---KDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNI 149 (190)
T ss_pred CCceEEEecCCEEEEEEecCCCchhhhh---hhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhE
Confidence 000012379999999986544321 23467888999999999999999999 9999999999885
No 427
>smart00090 RIO RIO-like kinase.
Probab=98.83 E-value=7.4e-09 Score=104.07 Aligned_cols=104 Identities=18% Similarity=0.101 Sum_probs=79.5
Q ss_pred CccccceeccCCCcCEEEEE--EcCCcEEEEEecccce------------------------------------------
Q 040814 420 NFSTTNKLGEGGFGPVYKGK--LLDGQVIAVKRLSGRT------------------------------------------ 455 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~--~~~~~~vavK~~~~~~------------------------------------------ 455 (664)
.|++.+.||+|+||.||+|. ..+|+.||||+++...
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47788999999999999998 4679999999886321
Q ss_pred ---EEEEeEeecCCeeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcC-ccccccccccc
Q 040814 456 ---IRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYS-RLRMNESKVNT 527 (664)
Q Consensus 456 ---v~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~-~~h~d~~~~n~ 527 (664)
+....... ....++||||+++++|..+.. ....+.......++.||+.+|.+||+.+ ++|+|++|.|.
T Consensus 109 ~~~i~~p~~~~-~~~~~lV~E~~~g~~L~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NI 180 (237)
T smart00090 109 EAGVPVPKPIA-WRRNVLVMEFIGGDGLPAPRL---KDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNI 180 (237)
T ss_pred hcCCCCCeeeE-ecCceEEEEEecCCccccccc---ccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhE
Confidence 00001111 123589999999998876542 2334566677899999999999999999 99999999885
No 428
>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation. This is sporophytically controlled by multiple alleles at a single locus (S). There are a total of 50 different S alleles in Brassica oleracea. S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles []. Most of the proteins within this family contain apple-like domain (IPR003609 from INTERPRO), which is predicted to possess protein- and/or carbohydrate-binding functions.; GO: 0048544 recognition of pollen
Probab=98.71 E-value=1.9e-08 Score=88.29 Aligned_cols=55 Identities=33% Similarity=0.764 Sum_probs=50.2
Q ss_pred EeeccCCCCccccccccccc--cCcceEEeecCCeeEEEEEecCCccccccEEEEcCCCCc
Q 040814 218 WKSGILSNGHFNFSDLESIN--QDYNFSFISDEKEQYFSYSVNEDVISLFPMLKIDPEGGL 276 (664)
Q Consensus 218 w~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 276 (664)
||+|+|+|..| +|+|++. ..+.+.|+.+++|.||+|.+.+.+. ++|++||.+|++
T Consensus 1 wrsG~WnG~~f--~g~p~~~~~~~~~~~fv~~~~e~~~t~~~~~~s~--~~r~~ld~~G~l 57 (110)
T PF00954_consen 1 WRSGPWNGQRF--SGIPEMSSNSLYNYSFVSNNEEVYYTYSLSNSSV--LSRLVLDSDGQL 57 (110)
T ss_pred CCccccCCeEE--CCcccccccceeEEEEEECCCeEEEEEecCCCce--EEEEEEeeeeEE
Confidence 89999999999 9999984 5688899999999999999988876 899999999987
No 429
>PRK10345 hypothetical protein; Provisional
Probab=98.70 E-value=4.9e-08 Score=95.90 Aligned_cols=98 Identities=17% Similarity=0.190 Sum_probs=74.9
Q ss_pred cccceeccCCCcCEEEEEEcCCcEEEEEecc---------------------------cceEEEEeEeecCC---e-eEE
Q 040814 422 STTNKLGEGGFGPVYKGKLLDGQVIAVKRLS---------------------------GRTIRLMGCSLHGA---E-RIL 470 (664)
Q Consensus 422 ~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~---------------------------~~~v~l~g~~~~~~---~-~~l 470 (664)
...+.||+|+||.||. .++....+||++. +++++++|++..+. . ..+
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~ 82 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV 82 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence 3457999999999996 4443333688754 35789999988763 3 347
Q ss_pred EEec--cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHH-HHhhhcCccccccccccc
Q 040814 471 VYEF--MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGL-IYLHKYSRLRMNESKVNT 527 (664)
Q Consensus 471 V~Ey--~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL-~yLH~~~~~h~d~~~~n~ 527 (664)
|+|| +++|+|.+++.+ ..+++. ..++.+++.++ +|||+.+++|+|++|.|.
T Consensus 83 I~e~~G~~~~tL~~~l~~----~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NI 136 (210)
T PRK10345 83 IADFDGKPSITLTEFAEQ----CRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNI 136 (210)
T ss_pred EecCCCCcchhHHHHHHc----ccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHE
Confidence 8999 668999999943 345555 35678888888 899999999999999885
No 430
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.70 E-value=1.8e-08 Score=100.98 Aligned_cols=154 Identities=19% Similarity=0.195 Sum_probs=98.8
Q ss_pred CeeEEEEeccCCCchhHHhhcccc-cCCCCHHHHHHHHHHHHHHHHHhhhcCcc--cccccc------cc----------
Q 040814 466 AERILVYEFMPNKSLDFFIFDSVK-KKQLNWSKRITIIEGIAQGLIYLHKYSRL--RMNESK------VN---------- 526 (664)
Q Consensus 466 ~~~~lV~Ey~~~gsL~~~l~~~~~-~~~l~~~~~~~I~~~ia~gL~yLH~~~~~--h~d~~~------~n---------- 526 (664)
.+..++.|||..|+|..||.+..+ .+.+....-.+++-||..||.|||+.... |.+... .|
T Consensus 145 ~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~ngLIkig~~ap 224 (458)
T KOG1266|consen 145 PRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGSVAP 224 (458)
T ss_pred cceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeecCCceEEecccCc
Confidence 456789999999999999976433 35677778889999999999999974321 211100 00
Q ss_pred --------------cccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChh
Q 040814 527 --------------TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKAS 592 (664)
Q Consensus 527 --------------~~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 592 (664)
.....+-++|.|||+-.-...+..+|||+||+..+||..+..-......... .+....
T Consensus 225 ~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~--------~ee~ia 296 (458)
T KOG1266|consen 225 DSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVE--------VEENIA 296 (458)
T ss_pred cccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceee--------hhhhhh
Confidence 1223456789999988777788999999999999999988754211111000 000000
Q ss_pred HhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHH
Q 040814 593 ELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSC 635 (664)
Q Consensus 593 ~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~ 635 (664)
.. ..+..+ ..-...+..|++.+|..||+|.+++..
T Consensus 297 ~~----i~~len----~lqr~~i~kcl~~eP~~rp~ar~llfH 331 (458)
T KOG1266|consen 297 NV----IIGLEN----GLQRGSITKCLEGEPNGRPDARLLLFH 331 (458)
T ss_pred hh----eeeccC----ccccCcCcccccCCCCCCcchhhhhcC
Confidence 00 000000 001123456999999999999988643
No 431
>PRK14879 serine/threonine protein kinase; Provisional
Probab=98.67 E-value=6.4e-08 Score=95.48 Aligned_cols=95 Identities=15% Similarity=0.153 Sum_probs=75.9
Q ss_pred ceeccCCCcCEEEEEEcCCcEEEEEecccc------------------------------eEEEEeEeecCCeeEEEEec
Q 040814 425 NKLGEGGFGPVYKGKLLDGQVIAVKRLSGR------------------------------TIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~------------------------------~v~l~g~~~~~~~~~lV~Ey 474 (664)
+.||+|++|.||+|.. +|..+++|+.... +.....++...+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999987 6778899975321 12233344456678899999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT 527 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~ 527 (664)
+++++|.+++... .+ .+..++.+++.+|.+||+.+.+|.|.++.|.
T Consensus 81 ~~G~~L~~~~~~~------~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Ni 126 (211)
T PRK14879 81 IEGEPLKDLINSN------GM-EELELSREIGRLVGKLHSAGIIHGDLTTSNM 126 (211)
T ss_pred eCCcCHHHHHHhc------cH-HHHHHHHHHHHHHHHHHhCCcccCCCCcccE
Confidence 9999999988421 12 8889999999999999999999999999884
No 432
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=98.58 E-value=1.1e-07 Score=92.79 Aligned_cols=91 Identities=16% Similarity=0.209 Sum_probs=70.3
Q ss_pred eeccCCCcCEEEEEEcCCcEEEEEecccc------------------------------eEEEEeEeecCCeeEEEEecc
Q 040814 426 KLGEGGFGPVYKGKLLDGQVIAVKRLSGR------------------------------TIRLMGCSLHGAERILVYEFM 475 (664)
Q Consensus 426 ~lg~G~fg~Vy~~~~~~~~~vavK~~~~~------------------------------~v~l~g~~~~~~~~~lV~Ey~ 475 (664)
.||+|+||.||+|.. +++.|++|+.... +.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 489999999999985 6788999975321 111122334455678999999
Q ss_pred CCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc
Q 040814 476 PNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT 527 (664)
Q Consensus 476 ~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~ 527 (664)
++++|.+++.... . .++.+++++|.+||+.+.+|.|.++.|.
T Consensus 80 ~g~~l~~~~~~~~---~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Ni 121 (199)
T TIGR03724 80 EGKPLKDVIEEGN---D-------ELLREIGRLVGKLHKAGIVHGDLTTSNI 121 (199)
T ss_pred CCccHHHHHhhcH---H-------HHHHHHHHHHHHHHHCCeecCCCCcceE
Confidence 9999998874311 1 8899999999999999999999999884
No 433
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=98.57 E-value=5.6e-08 Score=95.07 Aligned_cols=106 Identities=17% Similarity=0.124 Sum_probs=78.5
Q ss_pred HHHHHHhcCccccceeccCCCcCEEEEEEcCCcEEEEEecccce------------------------------------
Q 040814 412 QTIAAATNNFSTTNKLGEGGFGPVYKGKLLDGQVIAVKRLSGRT------------------------------------ 455 (664)
Q Consensus 412 ~~i~~~t~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~------------------------------------ 455 (664)
.++......|...+.||+|+||.||++..++|+.||||++....
T Consensus 8 ~~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 87 (198)
T cd05144 8 HTLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAAL 87 (198)
T ss_pred HHHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHH
Confidence 34444444577789999999999999998889999999754210
Q ss_pred -------EEEEeEeecCCeeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc
Q 040814 456 -------IRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT 527 (664)
Q Consensus 456 -------v~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~ 527 (664)
+.+... ......++||||+++++|..... ......++.+++.++.++|+.+++|.|+++.|.
T Consensus 88 ~~l~~~~i~v~~~-~~~~~~~lv~e~~~g~~L~~~~~---------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Ni 156 (198)
T cd05144 88 KALYEEGFPVPKP-IDWNRHAVVMEYIDGVELYRVRV---------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNI 156 (198)
T ss_pred HHHHHcCCCCCce-eecCCceEEEEEeCCcchhhccc---------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccE
Confidence 000000 11234589999999999876541 034567899999999999999999999999884
No 434
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=98.56 E-value=1.2e-07 Score=107.07 Aligned_cols=99 Identities=15% Similarity=0.189 Sum_probs=75.4
Q ss_pred hcCccccceeccCCCcCEEEEEEcCCcEEEEEe-ccc-----------------------------ceEEEEeEeecCCe
Q 040814 418 TNNFSTTNKLGEGGFGPVYKGKLLDGQVIAVKR-LSG-----------------------------RTIRLMGCSLHGAE 467 (664)
Q Consensus 418 t~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~-~~~-----------------------------~~v~l~g~~~~~~~ 467 (664)
...|...++||+|+||.||+|.+.... +++|+ +.+ +++....++..+..
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE 410 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence 344566789999999999999875543 33332 111 12334455556667
Q ss_pred eEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccc
Q 040814 468 RILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTN 528 (664)
Q Consensus 468 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~ 528 (664)
.++||||+++++|.+++. .+..++.+++++|.|||+.+.+|+|+++.|.-
T Consensus 411 ~~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NIL 460 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFI 460 (535)
T ss_pred CEEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEE
Confidence 899999999999998883 45789999999999999999999999999853
No 435
>PRK12274 serine/threonine protein kinase; Provisional
Probab=98.55 E-value=4.7e-07 Score=87.85 Aligned_cols=135 Identities=16% Similarity=0.084 Sum_probs=94.9
Q ss_pred ccceeccCCCcCEEEEEEcCCcEEEEEeccc---------------------------ceEEEEeEeecCCeeEEEEecc
Q 040814 423 TTNKLGEGGFGPVYKGKLLDGQVIAVKRLSG---------------------------RTIRLMGCSLHGAERILVYEFM 475 (664)
Q Consensus 423 ~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~---------------------------~~v~l~g~~~~~~~~~lV~Ey~ 475 (664)
....|++|+||+||.+.- .+..++.+.+.. .+.+++++ +..+++|||+
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI 80 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL 80 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence 457899999999997765 566677655532 13455554 3468999999
Q ss_pred CCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccc-ccccccc-------------------------
Q 040814 476 PNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNE-SKVNTNR------------------------- 529 (664)
Q Consensus 476 ~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~-~~~n~~~------------------------- 529 (664)
.+.+|...+. . ....++.|++++|.++|+.+++|+|+ ++.|.-.
T Consensus 81 ~G~~L~~~~~----~------~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r 150 (218)
T PRK12274 81 AGAAMYQRPP----R------GDLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMR 150 (218)
T ss_pred cCccHHhhhh----h------hhHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHH
Confidence 9999865431 1 12457889999999999999999999 6766100
Q ss_pred --------------ccccCCccchhhhccC-CCC-ccchHHHHHHHHHHHHhCCCCCCC
Q 040814 530 --------------VVGTYGYMAPEYAMNG-IVS-MKADVFSFGVLLLEIVSGRKNNNC 572 (664)
Q Consensus 530 --------------~~Gt~~Y~APE~~~~~-~~s-~ksDVySfGvvL~ElltG~~p~~~ 572 (664)
...++.|++|+...-. ..+ ...+.++-|.-+|.++|++.+.-.
T Consensus 151 ~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 151 LLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 0134556666544321 233 567899999999999999988643
No 436
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=98.52 E-value=1.8e-07 Score=90.34 Aligned_cols=100 Identities=19% Similarity=0.160 Sum_probs=70.7
Q ss_pred cceeccCCCcCEEEEEEcCCcEEEEEecccceE------EE-----------------EeEe------------------
Q 040814 424 TNKLGEGGFGPVYKGKLLDGQVIAVKRLSGRTI------RL-----------------MGCS------------------ 462 (664)
Q Consensus 424 ~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~v------~l-----------------~g~~------------------ 462 (664)
.+.||+|+||.||+|...+++.||||++.+... .. ...+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 468999999999999988899999998765210 00 0000
Q ss_pred ---ecCCeeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhh-cCccccccccccc
Q 040814 463 ---LHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK-YSRLRMNESKVNT 527 (664)
Q Consensus 463 ---~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~-~~~~h~d~~~~n~ 527 (664)
..-...++||||++++.+....... .... .....++.+++.++.++|. .+++|.|+++.|.
T Consensus 82 ~~~~~~~~~~lv~e~~~g~~~~~~~l~~---~~~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Ni 146 (187)
T cd05119 82 PKPIDLNRHVLVMEFIGGDGIPAPRLKD---VRLL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNI 146 (187)
T ss_pred CceEecCCCEEEEEEeCCCCccChhhhh---hhhc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhE
Confidence 0012457999999996543221110 0111 6678899999999999999 9999999999884
No 437
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=98.41 E-value=4.7e-08 Score=110.61 Aligned_cols=205 Identities=17% Similarity=0.177 Sum_probs=141.5
Q ss_pred CccccceeccCCCcCEEEEEEcC--CcEEEEEecc-------------------------cceEEEEeEeecCCeeEEEE
Q 040814 420 NFSTTNKLGEGGFGPVYKGKLLD--GQVIAVKRLS-------------------------GRTIRLMGCSLHGAERILVY 472 (664)
Q Consensus 420 ~~~~~~~lg~G~fg~Vy~~~~~~--~~~vavK~~~-------------------------~~~v~l~g~~~~~~~~~lV~ 472 (664)
.|...+.||+|.|+.|-...... ...+|+|.+. .+.+++++...+.+..+++.
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~ 100 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSL 100 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccccc
Confidence 45556778999999888776522 3445555442 23577888888889999999
Q ss_pred eccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhh-hcCcccccccccc-------------------------
Q 040814 473 EFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLH-KYSRLRMNESKVN------------------------- 526 (664)
Q Consensus 473 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH-~~~~~h~d~~~~n------------------------- 526 (664)
||..++++...+.+ ......+....-.++.|+..++.|+| ..+..|+++++.|
T Consensus 101 ~~s~g~~~f~~i~~-~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~ 179 (601)
T KOG0590|consen 101 SYSDGGSLFSKISH-PDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKN 179 (601)
T ss_pred Cccccccccccccc-CCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccccccC
Confidence 99999999887731 11225667778889999999999999 9999999888876
Q ss_pred -----cccccc-cCCccchhhhccC-CCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhh
Q 040814 527 -----TNRVVG-TYGYMAPEYAMNG-IVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAAL 599 (664)
Q Consensus 527 -----~~~~~G-t~~Y~APE~~~~~-~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 599 (664)
....+| ++.|+|||+..+. ...+..|+||.|+++.-+++|..|+.......... .. |.+.. ...
T Consensus 180 g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~-~~--~~~~~------~~~ 250 (601)
T KOG0590|consen 180 GAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRY-SS--WKSNK------GRF 250 (601)
T ss_pred CcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccc-ee--ecccc------ccc
Confidence 112357 8999999999874 45678999999999999999999986544332110 00 11110 000
Q ss_pred CCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 600 DGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
..............+...++..+|+.|.+.+++..
T Consensus 251 ~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 251 TQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred ccCccccCChhhhhcccccccCCchhccccccccc
Confidence 01111122233455556678789999999887753
No 438
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.06 E-value=4.1e-06 Score=91.17 Aligned_cols=197 Identities=18% Similarity=0.179 Sum_probs=133.7
Q ss_pred ccccceecc--CCCcCEEEEEE---cCCcEEEEEeccc-------------------------ceEEEEeEeecCCeeEE
Q 040814 421 FSTTNKLGE--GGFGPVYKGKL---LDGQVIAVKRLSG-------------------------RTIRLMGCSLHGAERIL 470 (664)
Q Consensus 421 ~~~~~~lg~--G~fg~Vy~~~~---~~~~~vavK~~~~-------------------------~~v~l~g~~~~~~~~~l 470 (664)
|.+...+|. |.+|.+|.+.. .++..+|+|+-+. +.++........+..++
T Consensus 116 ~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfi 195 (524)
T KOG0601|consen 116 FPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFI 195 (524)
T ss_pred cccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCccee
Confidence 455678999 99999999987 3478899987321 13555556666788889
Q ss_pred EEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHH----HHHHhhhcCccccccccccc-------------------
Q 040814 471 VYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQ----GLIYLHKYSRLRMNESKVNT------------------- 527 (664)
Q Consensus 471 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~----gL~yLH~~~~~h~d~~~~n~------------------- 527 (664)
-.|+|. .+|..+.+. ....++....+.+..+... ||..+|...++|-+.++.|.
T Consensus 196 qtE~~~-~sl~~~~~~--~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~ 272 (524)
T KOG0601|consen 196 QTELCG-ESLQSYCHT--PCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSK 272 (524)
T ss_pred eecccc-chhHHhhhc--ccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcceeEE
Confidence 999886 688887754 3445777777888888888 99999999999887777661
Q ss_pred -------------ccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHh
Q 040814 528 -------------NRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASEL 594 (664)
Q Consensus 528 -------------~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (664)
.+..|...|++||... +.++.+.|||++|.+..|..++.......-.. . |.+-+-..+
T Consensus 273 i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~------~--W~~~r~~~i 343 (524)
T KOG0601|consen 273 ISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNS------S--WSQLRQGYI 343 (524)
T ss_pred ccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCC------C--ccccccccC
Confidence 0113566799999876 57899999999999999999987764322000 0 111110001
Q ss_pred hhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHH
Q 040814 595 MEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVS 634 (664)
Q Consensus 595 ~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~ 634 (664)
..++......++-....+.++++|-.|++.+.+..
T Consensus 344 -----p~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 344 -----PLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred -----chhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 11111111122333666789999999998876653
No 439
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=98.00 E-value=1.5e-05 Score=87.50 Aligned_cols=99 Identities=20% Similarity=0.232 Sum_probs=72.2
Q ss_pred cceeccCCCcCEEEEEEcCCcEEEEEecccce------------------------------------------------
Q 040814 424 TNKLGEGGFGPVYKGKLLDGQVIAVKRLSGRT------------------------------------------------ 455 (664)
Q Consensus 424 ~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~------------------------------------------------ 455 (664)
.+.||.|++|.||+|++++|+.||||+.++.+
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 36799999999999999999999999987641
Q ss_pred ------------------EEEEeEee-cCCeeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHH-HHHHhhhc
Q 040814 456 ------------------IRLMGCSL-HGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQ-GLIYLHKY 515 (664)
Q Consensus 456 ------------------v~l~g~~~-~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~-gL~yLH~~ 515 (664)
+.+-..+. .....+|||||++|++|.++.... ...+ .+.+++..+++ .+..+|..
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~--~~~~---~~~~ia~~~~~~~l~ql~~~ 276 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALD--EAGL---DRKALAENLARSFLNQVLRD 276 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHH--hcCC---CHHHHHHHHHHHHHHHHHhC
Confidence 11111111 123468999999999998876321 1112 34567777776 47889999
Q ss_pred Cccccccccccc
Q 040814 516 SRLRMNESKVNT 527 (664)
Q Consensus 516 ~~~h~d~~~~n~ 527 (664)
+.+|.|.+|.|.
T Consensus 277 g~~H~D~hPgNi 288 (437)
T TIGR01982 277 GFFHADLHPGNI 288 (437)
T ss_pred CceeCCCCcccE
Confidence 999999999984
No 440
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=97.97 E-value=3.4e-05 Score=70.68 Aligned_cols=94 Identities=19% Similarity=0.144 Sum_probs=75.8
Q ss_pred ccceeccCCCcCEEEEEEcCCcEEEEEecccc----------------------eEEEEeEeecCCeeEEEEeccCCCch
Q 040814 423 TTNKLGEGGFGPVYKGKLLDGQVIAVKRLSGR----------------------TIRLMGCSLHGAERILVYEFMPNKSL 480 (664)
Q Consensus 423 ~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~----------------------~v~l~g~~~~~~~~~lV~Ey~~~gsL 480 (664)
+.+.||+|.++.||++...+ +.+++|...+. +.+++++...++..+++|||++++.+
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~ 80 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREKGADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETL 80 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeec
Confidence 35789999999999999854 78999988542 24566666666789999999998877
Q ss_pred hHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhc---Cccccccccccc
Q 040814 481 DFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKY---SRLRMNESKVNT 527 (664)
Q Consensus 481 ~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~---~~~h~d~~~~n~ 527 (664)
..+ +......++.+++++|++||.. +.+|.|.++.|.
T Consensus 81 ~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Ni 120 (155)
T cd05120 81 DEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNI 120 (155)
T ss_pred ccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceE
Confidence 532 5677788999999999999985 689999998873
No 441
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=97.91 E-value=6.9e-06 Score=94.22 Aligned_cols=155 Identities=22% Similarity=0.190 Sum_probs=109.2
Q ss_pred HhcCccccceeccCCCcCEEEEEEcC-CcEEEEEeccc------c------------e-------EEEEeEeecCCeeEE
Q 040814 417 ATNNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSG------R------------T-------IRLMGCSLHGAERIL 470 (664)
Q Consensus 417 ~t~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~------~------------~-------v~l~g~~~~~~~~~l 470 (664)
..+++.+.+-+-+|.++.++.+.-.. |...+.|.... + + ++..--+.......|
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 45677777888999999998876322 33333332211 0 1 111111224566789
Q ss_pred EEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc------------------------
Q 040814 471 VYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN------------------------ 526 (664)
Q Consensus 471 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n------------------------ 526 (664)
|++|..+++|...|+.. ...+..-....+..+...++|||...+.|+++++.+
T Consensus 882 ~~~~~~~~~~~Skl~~~---~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~ 958 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNS---GCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIP 958 (1205)
T ss_pred hhHHhccCCchhhhhcC---CCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCcccccccccccc
Confidence 99999999999988542 345555555566678889999998766666544433
Q ss_pred ---------------------------------cccccccCCccchhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 040814 527 ---------------------------------TNRVVGTYGYMAPEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCY 573 (664)
Q Consensus 527 ---------------------------------~~~~~Gt~~Y~APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~ 573 (664)
.....||+.|.+||...+......+|.|++|++++|.++|.+||...
T Consensus 959 p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~ 1038 (1205)
T KOG0606|consen 959 PTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAE 1038 (1205)
T ss_pred CcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCc
Confidence 12346899999999999999999999999999999999999998654
Q ss_pred C
Q 040814 574 D 574 (664)
Q Consensus 574 ~ 574 (664)
.
T Consensus 1039 t 1039 (1205)
T KOG0606|consen 1039 T 1039 (1205)
T ss_pred c
Confidence 3
No 442
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=97.87 E-value=7.7e-05 Score=75.15 Aligned_cols=94 Identities=13% Similarity=0.121 Sum_probs=68.6
Q ss_pred ceec-cCCCcCEEEEEEcCCcEEEEEecccc-------------------------------------eEEEEeEeecCC
Q 040814 425 NKLG-EGGFGPVYKGKLLDGQVIAVKRLSGR-------------------------------------TIRLMGCSLHGA 466 (664)
Q Consensus 425 ~~lg-~G~fg~Vy~~~~~~~~~vavK~~~~~-------------------------------------~v~l~g~~~~~~ 466 (664)
..|| .||.|+||++... +..++||++... ..+.+++...+.
T Consensus 37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 5687 9999999999884 677888876420 133444433221
Q ss_pred ----eeEEEEeccCC-CchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc
Q 040814 467 ----ERILVYEFMPN-KSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT 527 (664)
Q Consensus 467 ----~~~lV~Ey~~~-gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~ 527 (664)
..++|+||+++ .+|.+++.+ ..++.. .+.+|+.+|.+||+.+++|+|+++.|.
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~~----~~l~~~----~~~~i~~~l~~lH~~GI~HrDlkp~NI 173 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQE----APLSEE----QWQAIGQLIARFHDAGVYHADLNAHNI 173 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHhc----CCCCHH----HHHHHHHHHHHHHHCCCCCCCCCchhE
Confidence 12599999997 699888732 344443 367899999999999999999999985
No 443
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=97.78 E-value=1.4e-05 Score=87.12 Aligned_cols=202 Identities=16% Similarity=0.142 Sum_probs=135.2
Q ss_pred HhcCccccceeccCCCcCEEEEEEc--CCcEEEEEecccce-------------------------EEEEeEeecCCeeE
Q 040814 417 ATNNFSTTNKLGEGGFGPVYKGKLL--DGQVIAVKRLSGRT-------------------------IRLMGCSLHGAERI 469 (664)
Q Consensus 417 ~t~~~~~~~~lg~G~fg~Vy~~~~~--~~~~vavK~~~~~~-------------------------v~l~g~~~~~~~~~ 469 (664)
-+.+|..+..||.|.|+.|++...+ ++..+++|.+.+.+ ++....+..-.+.+
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ 342 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY 342 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc
Confidence 3457788899999999999998754 47889999876531 22222333445567
Q ss_pred EEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccccc-------------------
Q 040814 470 LVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTNRV------------------- 530 (664)
Q Consensus 470 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~~~------------------- 530 (664)
+=.|||+++++...+ .-...++...++++..|++.++.++|+...+|.|.++.|....
T Consensus 343 ip~e~~~~~s~~l~~---~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~ 419 (524)
T KOG0601|consen 343 IPLEFCEGGSSSLRS---VTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAF 419 (524)
T ss_pred CchhhhcCcchhhhh---HHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccccce
Confidence 889999999987766 2345788899999999999999999999999999888772111
Q ss_pred -----cccCCcc--chhhhccCCCCccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCC
Q 040814 531 -----VGTYGYM--APEYAMNGIVSMKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPC 603 (664)
Q Consensus 531 -----~Gt~~Y~--APE~~~~~~~s~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 603 (664)
.+.-+++ +|+......+..+.|++|||.-+.|.+++..-......... ...+.. ...
T Consensus 420 ~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~~~-------i~~~~~---------p~~ 483 (524)
T KOG0601|consen 420 SSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQSLT-------IRSGDT---------PNL 483 (524)
T ss_pred ecccccccccccccchhhccccccccccccccccccccccccCcccCccccccee-------eecccc---------cCC
Confidence 1122345 44444567788999999999999999998764321111000 001100 001
Q ss_pred CHHHHHHHHHHHHhcccccCCCCCCHHHHHHHHhc
Q 040814 604 PENELLRCIHAGLLCVHDQAVNRPTMADVVSCLRQ 638 (664)
Q Consensus 604 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L~~ 638 (664)
+... ..+..+....+.+++..||.+.++..+.+-
T Consensus 484 ~~~~-~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~ 517 (524)
T KOG0601|consen 484 PGLK-LQLQVLLKVMINPDRKRRPSAVELSLHSEF 517 (524)
T ss_pred CchH-HhhhhhhhhhcCCccccchhhhhhcccchh
Confidence 1111 233333444778899999998877665443
No 444
>smart00108 B_lectin Bulb-type mannose-specific lectin.
Probab=97.67 E-value=0.00015 Score=64.11 Aligned_cols=73 Identities=23% Similarity=0.369 Sum_probs=53.4
Q ss_pred CCceEEEcCC-CCcEEEeecccCCc-cceEEEeecccEEEEecCCCCcccCCCceeeeccCCCeEEEEEecCCCCCCCCC
Q 040814 110 DGNLKILREG-ENPIAISSIQEGGN-VTRATLLQSGNFVLQEMNSDDTLLPGMKIGINLQTGHKWFLQSWIGGDSPAPGS 187 (664)
Q Consensus 110 ~G~L~l~~~~-~~~vwss~~~~~~~-~~~a~LldsGNlVl~~~~PtDTlLPg~kl~~~~~tg~~~~L~Sw~s~~dps~G~ 187 (664)
||+||+.+.. +.+||+++...+.. ...+.|.++|||||++.+ | -+-|.+.+....|.
T Consensus 29 dgnlV~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~-----------------g----~~vW~S~t~~~~~~ 87 (114)
T smart00108 29 DYNLILYKSSSRTVVWVANRDNPVSDSCTLTLQSDGNLVLYDGD-----------------G----RVVWSSNTTGANGN 87 (114)
T ss_pred CEEEEEEECCCCcEEEECCCCCCCCCCEEEEEeCCCCEEEEeCC-----------------C----CEEEEecccCCCCc
Confidence 8999999775 57999998764322 367899999999998642 1 13477766656788
Q ss_pred ceeeecCCCcceEEEcC
Q 040814 188 FTIRLDSNTGNQLIIHH 204 (664)
Q Consensus 188 ~~~~~~~~~~~~~~~~~ 204 (664)
+.+.++.+ +.++++..
T Consensus 88 ~~~~L~dd-Gnlvl~~~ 103 (114)
T smart00108 88 YVLVLLDD-GNLVIYDS 103 (114)
T ss_pred eEEEEeCC-CCEEEECC
Confidence 89999886 45666654
No 445
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=97.45 E-value=0.00026 Score=78.98 Aligned_cols=35 Identities=26% Similarity=0.401 Sum_probs=30.5
Q ss_pred cCccccceeccCCCcCEEEEEEcC-CcEEEEEecccc
Q 040814 419 NNFSTTNKLGEGGFGPVYKGKLLD-GQVIAVKRLSGR 454 (664)
Q Consensus 419 ~~~~~~~~lg~G~fg~Vy~~~~~~-~~~vavK~~~~~ 454 (664)
..|+. +.||+|++|.||+|++++ |+.||||+.+++
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~ 155 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPD 155 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcc
Confidence 35665 789999999999999988 999999999754
No 446
>cd00028 B_lectin Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.
Probab=97.39 E-value=0.00061 Score=60.36 Aligned_cols=82 Identities=21% Similarity=0.380 Sum_probs=57.1
Q ss_pred CCceEEEcCC-CCcEEEeecccC-CccceEEEeecccEEEEecCCCCcccCCCceeeeccCCCeEEEEEecCCCCCCCCC
Q 040814 110 DGNLKILREG-ENPIAISSIQEG-GNVTRATLLQSGNFVLQEMNSDDTLLPGMKIGINLQTGHKWFLQSWIGGDSPAPGS 187 (664)
Q Consensus 110 ~G~L~l~~~~-~~~vwss~~~~~-~~~~~a~LldsGNlVl~~~~PtDTlLPg~kl~~~~~tg~~~~L~Sw~s~~dps~G~ 187 (664)
||+|++.+.. +.+||++|...+ .....+.|.++|||||.+.+ | -+-|.|....+.+.
T Consensus 30 dgnlv~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~-----------------g----~~vW~S~~~~~~~~ 88 (116)
T cd00028 30 DYNLILYKGSSRTVVWVANRDNPSGSSCTLTLQSDGNLVIYDGS-----------------G----TVVWSSNTTRVNGN 88 (116)
T ss_pred eEEEEEEeCCCCeEEEECCCCCCCCCCEEEEEecCCCeEEEcCC-----------------C----cEEEEecccCCCCc
Confidence 8999998765 579999997642 34567899999999998642 1 12366666545678
Q ss_pred ceeeecCCCcceEEEcCCccccccccccceEeec
Q 040814 188 FTIRLDSNTGNQLIIHHGWLNSIKVEQKDYWKSG 221 (664)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yw~~g 221 (664)
+.+.|+.+ +.+++|... ....|.+.
T Consensus 89 ~~~~L~dd-Gnlvl~~~~--------~~~~W~Sf 113 (116)
T cd00028 89 YVLVLLDD-GNLVLYDSD--------GNFLWQSF 113 (116)
T ss_pred eEEEEeCC-CCEEEECCC--------CCEEEcCC
Confidence 88888886 456666532 15677754
No 447
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=97.08 E-value=0.0022 Score=62.21 Aligned_cols=95 Identities=14% Similarity=0.091 Sum_probs=68.4
Q ss_pred ceeccCCCcCEEEEEEcC-------CcEEEEEecccce------------------------------------------
Q 040814 425 NKLGEGGFGPVYKGKLLD-------GQVIAVKRLSGRT------------------------------------------ 455 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~~-------~~~vavK~~~~~~------------------------------------------ 455 (664)
..||.|.-+.||.|...+ +..+|||+.+...
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 579999999999998643 4799999875310
Q ss_pred --------EEEEeEeecCCeeEEEEeccCCCchhH-HhhcccccCCCCHHHHHHHHHHHHHHHHHh-hhcCccccccccc
Q 040814 456 --------IRLMGCSLHGAERILVYEFMPNKSLDF-FIFDSVKKKQLNWSKRITIIEGIAQGLIYL-HKYSRLRMNESKV 525 (664)
Q Consensus 456 --------v~l~g~~~~~~~~~lV~Ey~~~gsL~~-~l~~~~~~~~l~~~~~~~I~~~ia~gL~yL-H~~~~~h~d~~~~ 525 (664)
-+.+++ ...+|||||+.+..+.. .| +...++..+...+..+++.+|..| |+.+.+|.|.++.
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~L----kd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~ 154 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKL----KDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEY 154 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhh----hccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHH
Confidence 112211 34579999998764432 22 122445556678889999999999 8999999999988
Q ss_pred cc
Q 040814 526 NT 527 (664)
Q Consensus 526 n~ 527 (664)
|.
T Consensus 155 NI 156 (197)
T cd05146 155 NM 156 (197)
T ss_pred HE
Confidence 74
No 448
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=97.03 E-value=0.0023 Score=60.29 Aligned_cols=90 Identities=18% Similarity=0.062 Sum_probs=66.2
Q ss_pred cceeccCCCcCEEEEEEcCCcEEEEEecccc----------------------eEEEEeEeecCCeeEEEEeccCCCchh
Q 040814 424 TNKLGEGGFGPVYKGKLLDGQVIAVKRLSGR----------------------TIRLMGCSLHGAERILVYEFMPNKSLD 481 (664)
Q Consensus 424 ~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~----------------------~v~l~g~~~~~~~~~lV~Ey~~~gsL~ 481 (664)
.+.|+.|.++.||++... ++.+++|...+. ..+++.+. ....++||||+++.++.
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~ 79 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELL 79 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCccc
Confidence 467899999999999874 778999987542 12344433 23458999999998875
Q ss_pred HHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCc-----cccccccccc
Q 040814 482 FFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSR-----LRMNESKVNT 527 (664)
Q Consensus 482 ~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~-----~h~d~~~~n~ 527 (664)
..- .....++.+++++|..||..+. +|.|.++.|.
T Consensus 80 ~~~-----------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Ni 119 (170)
T cd05151 80 TED-----------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNF 119 (170)
T ss_pred ccc-----------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcE
Confidence 320 1123467899999999999875 9999999884
No 449
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=96.98 E-value=0.0021 Score=63.39 Aligned_cols=88 Identities=16% Similarity=0.191 Sum_probs=68.5
Q ss_pred ceeccCCCcCEEEEEEcCCcEEEEEecccc-------------------------eEEEEeEeecC---CeeEEEEeccC
Q 040814 425 NKLGEGGFGPVYKGKLLDGQVIAVKRLSGR-------------------------TIRLMGCSLHG---AERILVYEFMP 476 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~-------------------------~v~l~g~~~~~---~~~~lV~Ey~~ 476 (664)
+.|+.|..+.+|++...+|+.+++|..... ..+++.+.... +..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 678999999999999877789999987541 12345555443 25689999999
Q ss_pred CCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcC
Q 040814 477 NKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYS 516 (664)
Q Consensus 477 ~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~ 516 (664)
+.++...+. ...++...+..++.++++.|.+||+..
T Consensus 84 G~~l~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~ 119 (223)
T cd05154 84 GRVLRDRLL----RPELSPEERRALARALADTLAALHSVD 119 (223)
T ss_pred CEecCCCCC----CCCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 998876552 145788899999999999999999854
No 450
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=96.94 E-value=0.006 Score=64.23 Aligned_cols=172 Identities=15% Similarity=0.128 Sum_probs=100.7
Q ss_pred eEEEEeccCCCchhHHhhc----ccccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccc-----------------
Q 040814 468 RILVYEFMPNKSLDFFIFD----SVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVN----------------- 526 (664)
Q Consensus 468 ~~lV~Ey~~~gsL~~~l~~----~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n----------------- 526 (664)
.-++|..+++.-=-..++. +......+|.-.++.++.+|.+.+-||..|..-.|..+.+
T Consensus 85 iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsf 164 (637)
T COG4248 85 IGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSF 164 (637)
T ss_pred eEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcccce
Confidence 3456666655422222222 1223568999999999999999999999887666555544
Q ss_pred --------cccccccCCccchhhhc-----cCCCCccchHHHHHHHHHHHHhC-CCCCCCCCCCCc-hhhhhhHHhcCCh
Q 040814 527 --------TNRVVGTYGYMAPEYAM-----NGIVSMKADVFSFGVLLLEIVSG-RKNNNCYDEERP-LNLVGYLWKEGKA 591 (664)
Q Consensus 527 --------~~~~~Gt~~Y~APE~~~-----~~~~s~ksDVySfGvvL~ElltG-~~p~~~~~~~~~-~~~~~~~~~~~~~ 591 (664)
....+|...|.+||.-. +-.-+...|-|.+||++++++.| +.||.+...... .+-.+..+..+..
T Consensus 165 qi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f 244 (637)
T COG4248 165 QINANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRF 244 (637)
T ss_pred eeccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhccee
Confidence 11235778899999654 33457889999999999999997 899865321110 0000000111111
Q ss_pred hHhhhhh--h---CCCCCHHH-HHHHHHHHHhcccc--cCCCCCCHHHHHHHHhcc
Q 040814 592 SELMEAA--L---DGPCPENE-LLRCIHAGLLCVHD--QAVNRPTMADVVSCLRQN 639 (664)
Q Consensus 592 ~~~~d~~--~---~~~~~~~~-~~~l~~l~~~Cl~~--dP~~RPt~~evl~~L~~~ 639 (664)
...-+.. . ....|.+. ...+..+..+|+.. .+.-|||++.-+..|..+
T Consensus 245 ~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al 300 (637)
T COG4248 245 AYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDAL 300 (637)
T ss_pred eechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHH
Confidence 1111100 0 11222222 23344556678764 356899998877766543
No 451
>cd00129 PAN_APPLE PAN/APPLE-like domain; present in N-terminal (N) domains of plasminogen/ hepatocyte growth factor proteins, plasma prekallikrein/coagulation factor XI and microneme antigen proteins, plant receptor-like protein kinases, and various nematode and leech anti-platelet proteins. Common structural features include two disulfide bonds that link the alpha-helix to the central region of the protein. PAN domains have significant functional versatility, fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.
Probab=96.90 E-value=0.0005 Score=56.19 Aligned_cols=40 Identities=15% Similarity=0.176 Sum_probs=30.8
Q ss_pred cC---CCcCccccccCCCCCCCcccccCCC--cceeccCCCCccceeee
Q 040814 277 TE---NCSCFACAPTNSVANTGCEFWSKGA--KFAKISDPNFVRPIYIF 320 (664)
Q Consensus 277 ~~---nCsC~ay~~~~~~~~~GC~~w~~~l--~~~~~~~~~~~~~~~~~ 320 (664)
++ ||||.||+|... +.||..|++++ +.+...+.+ .++|+|
T Consensus 35 l~~~~nCsC~Aya~~~~--~~gC~~W~~~l~~d~~~~~~~g--~~Ly~r 79 (80)
T cd00129 35 EKNGLPFSCKAFVFAKA--RKQCLWFPFNSMSGVRKEFSHG--FDLYEN 79 (80)
T ss_pred hcCCCCCCceeeeccCC--CCCeEEecCcchhhHHhccCCC--ceeEeE
Confidence 68 999999999643 46899999988 566555445 678876
No 452
>PF08276 PAN_2: PAN-like domain; InterPro: IPR013227 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions []. These domains contain a hair-pin loop like structure, similar to knottins, but the pattern of disulphide bonds differs
Probab=96.84 E-value=0.00037 Score=54.85 Aligned_cols=27 Identities=37% Similarity=0.695 Sum_probs=22.4
Q ss_pred cCCCcCccccccCCCCCCCcccccCCC
Q 040814 277 TENCSCFACAPTNSVANTGCEFWSKGA 303 (664)
Q Consensus 277 ~~nCsC~ay~~~~~~~~~GC~~w~~~l 303 (664)
++||||.||+|.+..++.||.+|+++|
T Consensus 37 l~nCsC~Ayay~~~~~~~~C~lW~~~L 63 (66)
T PF08276_consen 37 LSNCSCTAYAYSNLSGGGGCLLWYGDL 63 (66)
T ss_pred CCCCCEeeEEeeccCCCCEEEEEcCEe
Confidence 899999999997532467899999876
No 453
>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity. Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....
Probab=96.63 E-value=0.016 Score=51.09 Aligned_cols=84 Identities=25% Similarity=0.276 Sum_probs=54.3
Q ss_pred CcEEeCCCeEEEeecCCCCCCCeEEEEEecCCCCCCCCCCCeEEEc-cCCCCCCCCCCceEEEEeCCCceEEEcCCCCcE
Q 040814 45 EPLVSASGKFMLGFFSPRFSTDKYLGIWYNRPAKESGYYKPPVWVA-NRNTPIFHKESASLTIDSKDGNLKILREGENPI 123 (664)
Q Consensus 45 ~~lvS~~g~F~lGFf~~~~~~~~y~gIw~~~~~~~~~~~~tvVWvA-Nr~~pv~~~~~~~l~l~~~~G~L~l~~~~~~~v 123 (664)
+.+.+.+|.+.|-|-..|+ |-| |.. ..++||.. +...+-. ....+.|.. +|||||.|..+.++
T Consensus 12 ~p~~~~s~~~~L~l~~dGn-----Lvl-~~~-------~~~~iWss~~t~~~~~--~~~~~~L~~-~GNlvl~d~~~~~l 75 (114)
T PF01453_consen 12 SPLTSSSGNYTLILQSDGN-----LVL-YDS-------NGSVIWSSNNTSGRGN--SGCYLVLQD-DGNLVLYDSSGNVL 75 (114)
T ss_dssp EEEEECETTEEEEEETTSE-----EEE-EET-------TTEEEEE--S-TTSS---SSEEEEEET-TSEEEEEETTSEEE
T ss_pred cccccccccccceECCCCe-----EEE-EcC-------CCCEEEEecccCCccc--cCeEEEEeC-CCCEEEEeecceEE
Confidence 4565655888888876653 333 333 14679999 4333331 246889988 99999999999999
Q ss_pred EEeecccCCccceEEEee--cccEE
Q 040814 124 AISSIQEGGNVTRATLLQ--SGNFV 146 (664)
Q Consensus 124 wss~~~~~~~~~~a~Lld--sGNlV 146 (664)
|+|..- ...+....++ .||++
T Consensus 76 W~Sf~~--ptdt~L~~q~l~~~~~~ 98 (114)
T PF01453_consen 76 WQSFDY--PTDTLLPGQKLGDGNVT 98 (114)
T ss_dssp EESTTS--SS-EEEEEET--TSEEE
T ss_pred EeecCC--CccEEEeccCcccCCCc
Confidence 998322 2344455555 78887
No 454
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=96.47 E-value=0.00054 Score=76.16 Aligned_cols=128 Identities=19% Similarity=0.214 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHHHhhh-cCccccccccccccc-----------------------------------ccccCCccchh
Q 040814 497 KRITIIEGIAQGLIYLHK-YSRLRMNESKVNTNR-----------------------------------VVGTYGYMAPE 540 (664)
Q Consensus 497 ~~~~I~~~ia~gL~yLH~-~~~~h~d~~~~n~~~-----------------------------------~~Gt~~Y~APE 540 (664)
....=+.+++.||.|+|. .+.+|..+.+..... ..-...|.|||
T Consensus 100 ~~f~nl~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE 179 (700)
T KOG2137|consen 100 DGFANLGNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPE 179 (700)
T ss_pred HhhhhhhcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccch
Confidence 334445667799999996 467776655543100 01224599999
Q ss_pred hhccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCCCCchhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHHHHHHhcc
Q 040814 541 YAMNGIVSMKADVFSFGVLLLEIVS-GRKNNNCYDEERPLNLVGYLWKEGKASELMEAALDGPCPENELLRCIHAGLLCV 619 (664)
Q Consensus 541 ~~~~~~~s~ksDVySfGvvL~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl 619 (664)
++.+...+.++|+||+||++|-+.. |+.-+............. ...+.-. ..+..+.+.++.+-+.+.+
T Consensus 180 ~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~------~~~~~~~----~~~s~~~p~el~~~l~k~l 249 (700)
T KOG2137|consen 180 YLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSR------NLLNAGA----FGYSNNLPSELRESLKKLL 249 (700)
T ss_pred hhccccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhh------ccccccc----ccccccCcHHHHHHHHHHh
Confidence 9999888999999999999999995 444443322211111110 0000000 1111222333444445568
Q ss_pred cccCCCCCCHHHHHH
Q 040814 620 HDQAVNRPTMADVVS 634 (664)
Q Consensus 620 ~~dP~~RPt~~evl~ 634 (664)
..++..||++.++..
T Consensus 250 ~~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 250 NGDSAVRPTLDLLLS 264 (700)
T ss_pred cCCcccCcchhhhhc
Confidence 889999998877653
No 455
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=96.38 E-value=0.0085 Score=66.70 Aligned_cols=131 Identities=22% Similarity=0.251 Sum_probs=83.3
Q ss_pred eeccCCCcCEEEEEEcCCcEE-----EEEec----ccceEEEEeEeecCCeeEEEEeccCCCchhHHhhcccccCCCCHH
Q 040814 426 KLGEGGFGPVYKGKLLDGQVI-----AVKRL----SGRTIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWS 496 (664)
Q Consensus 426 ~lg~G~fg~Vy~~~~~~~~~v-----avK~~----~~~~v~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~ 496 (664)
.-..|++-.||.....++..+ |+|++ |+++++++.....+...+||+|-+. -|..++. .+...
T Consensus 33 ~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk------~l~~~ 104 (690)
T KOG1243|consen 33 RKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLK------ELGKE 104 (690)
T ss_pred eeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHH------HhHHH
Confidence 344567777777776555221 34444 4578999999999999999999774 5666662 23355
Q ss_pred HHHHHHHHHHHHHHHhhhcC-cccccccccc------cccccccCC--------------------ccchhhhccCCCCc
Q 040814 497 KRITIIEGIAQGLIYLHKYS-RLRMNESKVN------TNRVVGTYG--------------------YMAPEYAMNGIVSM 549 (664)
Q Consensus 497 ~~~~I~~~ia~gL~yLH~~~-~~h~d~~~~n------~~~~~Gt~~--------------------Y~APE~~~~~~~s~ 549 (664)
...-.+.||+.||.|||+.+ .+|.+..... -.-..|... |..|+.+.... -
T Consensus 105 ~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~--~ 182 (690)
T KOG1243|consen 105 EVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSE--W 182 (690)
T ss_pred HHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCccc--c
Confidence 66677899999999998654 4454433221 011112222 33333322111 2
Q ss_pred cchHHHHHHHHHHHHhC
Q 040814 550 KADVFSFGVLLLEIVSG 566 (664)
Q Consensus 550 ksDVySfGvvL~ElltG 566 (664)
..|.|-||++++|++.|
T Consensus 183 s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 183 SIDSWGLGCLIEELFNG 199 (690)
T ss_pred chhhhhHHHHHHHHhCc
Confidence 45999999999999999
No 456
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=95.89 E-value=0.11 Score=56.52 Aligned_cols=135 Identities=21% Similarity=0.307 Sum_probs=90.0
Q ss_pred CcCEEEEEE-cCCcEEEEEeccc----------------------ceEEEEeEee----cCCeeEEEEeccCC-CchhHH
Q 040814 432 FGPVYKGKL-LDGQVIAVKRLSG----------------------RTIRLMGCSL----HGAERILVYEFMPN-KSLDFF 483 (664)
Q Consensus 432 fg~Vy~~~~-~~~~~vavK~~~~----------------------~~v~l~g~~~----~~~~~~lV~Ey~~~-gsL~~~ 483 (664)
-.+.||+.. -||..+++|+++. ++|++...+. ++.-.++||+|.|+ ++|.++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 346788886 4699999999953 2466655554 35568999999986 477766
Q ss_pred hhccc------------ccCCCCHHHHHHHHHHHHHHHHHhhhcCcccccccccccccccccC-------Cccchhhhcc
Q 040814 484 IFDSV------------KKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNTNRVVGTY-------GYMAPEYAMN 544 (664)
Q Consensus 484 l~~~~------------~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~~~~~Gt~-------~Y~APE~~~~ 544 (664)
-+... ....+++...+.++.|+..||.++|+.|.......+.+.- +.|++ +.| |++..
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIl-v~G~~RIriS~C~i~--Dvl~~ 445 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKIL-VTGKMRIRISGCGIM--DVLQE 445 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeE-eeCcceEEEecccce--eeecC
Confidence 65421 1235788999999999999999999988765443333211 12221 111 12221
Q ss_pred CC-----CCccchHHHHHHHHHHHHhCCCC
Q 040814 545 GI-----VSMKADVFSFGVLLLEIVSGRKN 569 (664)
Q Consensus 545 ~~-----~s~ksDVySfGvvL~ElltG~~p 569 (664)
.+ --.+-|.=.||.+++.|.||...
T Consensus 446 d~~~~le~~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 446 DPTEPLESQQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred CCCcchhHHhhhhHHHHHHHHHHHhhcccc
Confidence 11 12467888999999999999765
No 457
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=95.50 E-value=0.058 Score=51.22 Aligned_cols=92 Identities=15% Similarity=0.200 Sum_probs=66.5
Q ss_pred ceeccCCCcCEEEEEEcCCcEEEEEe-cccc-----------------------------eEEEEeEeecCCeeEEEEec
Q 040814 425 NKLGEGGFGPVYKGKLLDGQVIAVKR-LSGR-----------------------------TIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~~~~~vavK~-~~~~-----------------------------~v~l~g~~~~~~~~~lV~Ey 474 (664)
..+++|+-+.+|.+.+.+ ..+++|. +.+. +-.-+-+..+.....|+|||
T Consensus 2 ~~i~~GAEa~i~~~~~~g-~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFLG-LPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeeccC-cceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 467899999999997643 3455553 2221 01112234566778899999
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT 527 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~ 527 (664)
+++..|.++|... +..++..|-+-+.-||+.+++|.|+...|.
T Consensus 81 I~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~~givHGDLTtsNi 123 (204)
T COG3642 81 IEGELLKDALEEA----------RPDLLREVGRLVGKLHKAGIVHGDLTTSNI 123 (204)
T ss_pred eCChhHHHHHHhc----------chHHHHHHHHHHHHHHhcCeecCCCccceE
Confidence 9999999888432 367778888888899999999999998884
No 458
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=95.38 E-value=0.086 Score=49.95 Aligned_cols=103 Identities=16% Similarity=0.201 Sum_probs=71.1
Q ss_pred ccceeccCCCcCEEEEEEcCCcEEEEE-ecccc-----------------------------eEEEEeEeecCCeeEEEE
Q 040814 423 TTNKLGEGGFGPVYKGKLLDGQVIAVK-RLSGR-----------------------------TIRLMGCSLHGAERILVY 472 (664)
Q Consensus 423 ~~~~lg~G~fg~Vy~~~~~~~~~vavK-~~~~~-----------------------------~v~l~g~~~~~~~~~lV~ 472 (664)
....|-+|+-+.|+++.. .|+...|| ++.+. +..-.-++.+...-.|+|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 357899999999999988 56666666 33321 011112334455667999
Q ss_pred eccCC-CchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc
Q 040814 473 EFMPN-KSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT 527 (664)
Q Consensus 473 Ey~~~-gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~ 527 (664)
||+++ .++.+|+.........+ .....++..|-+-+.-||..+++|.|+...|.
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d-~~~~~~~~~iG~~igklH~ndiiHGDLTTSNi 144 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESED-EGLAELARRIGELIGKLHDNDIIHGDLTTSNI 144 (229)
T ss_pred EeccchhHHHHHHHHHccCcccc-hhHHHHHHHHHHHHHHhhhCCeecccccccce
Confidence 99977 47888886433222222 22267888999999999999999999988874
No 459
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=95.33 E-value=0.054 Score=60.32 Aligned_cols=97 Identities=15% Similarity=0.172 Sum_probs=67.5
Q ss_pred ceeccCCCcCEEEEEEcCCcEEEEEecccce-------------------------------------------------
Q 040814 425 NKLGEGGFGPVYKGKLLDGQVIAVKRLSGRT------------------------------------------------- 455 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~------------------------------------------------- 455 (664)
+.|+.++-|.||+|++++|+.||||+.++++
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 6799999999999999999999999998751
Q ss_pred -----------------EEEEeEeec-CCeeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHH-HHHhhhcC
Q 040814 456 -----------------IRLMGCSLH-GAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQG-LIYLHKYS 516 (664)
Q Consensus 456 -----------------v~l~g~~~~-~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~g-L~yLH~~~ 516 (664)
+++=..+.+ .....|+|||++|-.+.+...- +...++ +..|+..++++ +.-+-..|
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l--~~~g~d---~k~ia~~~~~~f~~q~~~dg 285 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAAL--KSAGID---RKELAELLVRAFLRQLLRDG 285 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHH--HhcCCC---HHHHHHHHHHHHHHHHHhcC
Confidence 233233332 3567899999999999887522 123344 33444444443 23334578
Q ss_pred cccccccccc
Q 040814 517 RLRMNESKVN 526 (664)
Q Consensus 517 ~~h~d~~~~n 526 (664)
.+|.|..|.|
T Consensus 286 ffHaDpHpGN 295 (517)
T COG0661 286 FFHADPHPGN 295 (517)
T ss_pred ccccCCCccc
Confidence 8999988887
No 460
>cd01098 PAN_AP_plant Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization.
Probab=95.32 E-value=0.011 Score=48.74 Aligned_cols=42 Identities=29% Similarity=0.560 Sum_probs=30.0
Q ss_pred cCCCcCccccccCCCCCCCcccccCCC-cceeccCCCCccceeeecc
Q 040814 277 TENCSCFACAPTNSVANTGCEFWSKGA-KFAKISDPNFVRPIYIFEP 322 (664)
Q Consensus 277 ~~nCsC~ay~~~~~~~~~GC~~w~~~l-~~~~~~~~~~~~~~~~~~~ 322 (664)
+.||+|.||++.++ +.+|..|...+ +.+.....+ ..+|+|++
T Consensus 42 l~nCsC~a~~~~~~--~~~C~~~~~~~~~~~~~~~~~--~~~yiKv~ 84 (84)
T cd01098 42 LSNCSCTAYAYNNG--SGGCLLWNGLLNNLRSLSSGG--GTLYLRLA 84 (84)
T ss_pred hcCCCcceeeecCC--CCeEEEEeceecceEeecCCC--cEEEEEeC
Confidence 79999999999743 56799998877 544433333 57888864
No 461
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=95.11 E-value=0.19 Score=51.41 Aligned_cols=60 Identities=12% Similarity=0.039 Sum_probs=49.5
Q ss_pred eeEEEEeccCCC-chhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc
Q 040814 467 ERILVYEFMPNK-SLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT 527 (664)
Q Consensus 467 ~~~lV~Ey~~~g-sL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~ 527 (664)
.-+||+|++++- +|.+++.+.. ....+...+..++.+++..+.-||+.|+.|.|..+.|.
T Consensus 109 ~s~LVte~l~~~~sL~~~~~~~~-~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~Ni 169 (268)
T PRK15123 109 TSFIITEDLAPTISLEDYCADWA-TNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHF 169 (268)
T ss_pred eeEEEEeeCCCCccHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhE
Confidence 468999999986 8998874321 23456677889999999999999999999999998885
No 462
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=94.40 E-value=0.12 Score=57.59 Aligned_cols=31 Identities=19% Similarity=0.313 Sum_probs=27.9
Q ss_pred cceeccCCCcCEEEEEEcCCcEEEEEecccc
Q 040814 424 TNKLGEGGFGPVYKGKLLDGQVIAVKRLSGR 454 (664)
Q Consensus 424 ~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~ 454 (664)
.+.||.-+.|.||+|++++|+.||||+-++.
T Consensus 166 ~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~ 196 (538)
T KOG1235|consen 166 EEPIAAASLAQVHRARLKNGEDVAVKVQHPG 196 (538)
T ss_pred cchhhhcchhheEEEEecCCCEEEEEecCcC
Confidence 3679999999999999999999999988763
No 463
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=94.36 E-value=0.11 Score=50.09 Aligned_cols=56 Identities=23% Similarity=0.300 Sum_probs=36.9
Q ss_pred eeEEEEeccC--CCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHH-hhhcCccccccccccc
Q 040814 467 ERILVYEFMP--NKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIY-LHKYSRLRMNESKVNT 527 (664)
Q Consensus 467 ~~~lV~Ey~~--~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~y-LH~~~~~h~d~~~~n~ 527 (664)
..+|||||++ +..+..+. + ..++......++.+++..+.. +|+.+++|.|....|.
T Consensus 80 ~~~ivME~I~~~G~~~~~l~-~----~~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NI 138 (188)
T PF01163_consen 80 RNVIVMEYIGEDGVPLPRLK-D----VDLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNI 138 (188)
T ss_dssp TTEEEEE--EETTEEGGCHH-H----CGGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSE
T ss_pred CCEEEEEecCCCccchhhHH-h----ccccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhE
Confidence 3579999998 65554433 1 122245667788888886666 5799999999998874
No 464
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=93.99 E-value=0.38 Score=47.30 Aligned_cols=99 Identities=15% Similarity=0.123 Sum_probs=68.9
Q ss_pred HhcCccccceeccCCCcCEEEEEEcCCcEEEEEecccc----------------------------------eEEEEeEe
Q 040814 417 ATNNFSTTNKLGEGGFGPVYKGKLLDGQVIAVKRLSGR----------------------------------TIRLMGCS 462 (664)
Q Consensus 417 ~t~~~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~----------------------------------~v~l~g~~ 462 (664)
..++|...+.+-......|.+... +|+.+++|...+. ...++...
T Consensus 29 ~~~~~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ 107 (229)
T PF06176_consen 29 LDNNYKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAA 107 (229)
T ss_pred HhCCceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeee
Confidence 456788888888887777777776 5788999987642 01111111
Q ss_pred -----ecCCeeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc
Q 040814 463 -----LHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT 527 (664)
Q Consensus 463 -----~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~ 527 (664)
.-....+|+|||++|..|.++. .++. .++..|+.++.-||+.|..|.|..+.|.
T Consensus 108 ekk~~~~~~~~~ll~EYIeG~~l~d~~-------~i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNF 166 (229)
T PF06176_consen 108 EKKIFRYTSSYVLLMEYIEGVELNDIE-------DIDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNF 166 (229)
T ss_pred eeeeccceeEEEEEEEEecCeecccch-------hcCH----HHHHHHHHHHHHHHHcCCccCCCCcCcE
Confidence 1123457999999998886543 1222 3556677889999999999999999883
No 465
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=93.68 E-value=0.05 Score=59.14 Aligned_cols=80 Identities=16% Similarity=0.159 Sum_probs=43.4
Q ss_pred ccchHHHHHHHHHHHHhCCCCCCCCCCCCchhhhhhHHh-cCChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCC
Q 040814 549 MKADVFSFGVLLLEIVSGRKNNNCYDEERPLNLVGYLWK-EGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRP 627 (664)
Q Consensus 549 ~ksDVySfGvvL~ElltG~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP 627 (664)
+|+||||+|.++.|+.-|..-+......+....+..... ......+.... .+-.+.....+.+...|+-..|..||
T Consensus 110 pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~~~d~~~~~~a~e~---~~~~~~d~~~~~~~~~c~~~~~~ir~ 186 (725)
T KOG1093|consen 110 PKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYYTDDQELLSTAMEH---LIQLLADKKRLPLLKKCLWLEPIIRP 186 (725)
T ss_pred cchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHH---HHHHhhhHhHHHHhccCCcccccccc
Confidence 599999999999999998765432222211111111111 11111111000 11223445577778889999998887
Q ss_pred CHHH
Q 040814 628 TMAD 631 (664)
Q Consensus 628 t~~e 631 (664)
...+
T Consensus 187 l~~~ 190 (725)
T KOG1093|consen 187 LPME 190 (725)
T ss_pred chhH
Confidence 5443
No 466
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=91.60 E-value=0.46 Score=56.72 Aligned_cols=156 Identities=15% Similarity=0.131 Sum_probs=95.0
Q ss_pred eEEEEeEeecCCee----EEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccc-----
Q 040814 455 TIRLMGCSLHGAER----ILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKV----- 525 (664)
Q Consensus 455 ~v~l~g~~~~~~~~----~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~----- 525 (664)
.++++++..+.... .+..||+..-++...+. ....++....+.+..++.+||.|+|+....|.-....
T Consensus 244 ~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q---~v~~i~~~~~r~~~~~~~~GL~~~h~~~l~~v~L~~s~~~~~ 320 (1351)
T KOG1035|consen 244 LGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQ---SVGSIPLETLRILHQKLLEGLAYLHSLSLEHVVLSASSSKES 320 (1351)
T ss_pred ccceeEEeehhhcchHHHHHHHhhcCccchHHHHh---hccccCHHHHHHHHHHHhhhHHHHHHhccceeEEeccccccc
Confidence 44555555443222 24457888888877773 3467888899999999999999999864333211000
Q ss_pred ---------------c----------cccccccCCccchhhhccCCCC--ccchHHHHHHHHHHHHhCCCCCCCCCCCCc
Q 040814 526 ---------------N----------TNRVVGTYGYMAPEYAMNGIVS--MKADVFSFGVLLLEIVSGRKNNNCYDEERP 578 (664)
Q Consensus 526 ---------------n----------~~~~~Gt~~Y~APE~~~~~~~s--~ksDVySfGvvL~ElltG~~p~~~~~~~~~ 578 (664)
+ .....-+..+.|||......+. .+.|+|.+|..+..+..|..+-...
T Consensus 321 ~~~~e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~~----- 395 (1351)
T KOG1035|consen 321 TVDGEGVVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQLSQGEDISEKS----- 395 (1351)
T ss_pred ccCccceeecchhhhcccccCCCcccchhhcCccccccccccccccchhhhhhHHHHHHHHHhhhhhcCcccccc-----
Confidence 0 0001123346677766654444 4479999999999999987663210
Q ss_pred hhhhhhHHhcCChhHhhhhhhCCCCCHHHHHHHHHHHHhcccccCCCCCCHHHHHHHH
Q 040814 579 LNLVGYLWKEGKASELMEAALDGPCPENELLRCIHAGLLCVHDQAVNRPTMADVVSCL 636 (664)
Q Consensus 579 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~evl~~L 636 (664)
......+...... .+......|+..++++|+...+++...
T Consensus 396 --------------~~~~~~l~~~~~~----~~~d~~~~~~~~~~~~Rl~~~~ll~~~ 435 (1351)
T KOG1035|consen 396 --------------AVPVSLLDVLSTS----ELLDALPKCLDEDSEERLSALELLTHP 435 (1351)
T ss_pred --------------cchhhhhccccch----hhhhhhhhhcchhhhhccchhhhhhch
Confidence 1111111111111 233445669999999999999998764
No 467
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=90.88 E-value=0.023 Score=63.07 Aligned_cols=146 Identities=13% Similarity=0.070 Sum_probs=98.8
Q ss_pred ccceeccCCCcCEEEEEEcCCcEEEEEeccc-----------------c-eEEEEeEeecCCeeEEEEeccCCC-chhHH
Q 040814 423 TTNKLGEGGFGPVYKGKLLDGQVIAVKRLSG-----------------R-TIRLMGCSLHGAERILVYEFMPNK-SLDFF 483 (664)
Q Consensus 423 ~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~-----------------~-~v~l~g~~~~~~~~~lV~Ey~~~g-sL~~~ 483 (664)
.-.-+++++++.++|.+-...+....+.+.. + .++.++-+..+...+++++|+..+ +-..-
T Consensus 246 ~fh~fvK~altknpKkRptaeklL~h~fvs~~l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs~~~~ 325 (829)
T KOG0576|consen 246 FFHNFVKGALTKNPKKRPTAEKLLQHPFVSQTLSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRSSALE 325 (829)
T ss_pred HHHHHHHHHhcCCCccCCChhhheeceeeccchhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCcccccc
Confidence 3456889999999998753333334554432 2 356666666677788999999877 22111
Q ss_pred hhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccc--cccc------------------ccccccccCCccchhhhc
Q 040814 484 IFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMN--ESKV------------------NTNRVVGTYGYMAPEYAM 543 (664)
Q Consensus 484 l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d--~~~~------------------n~~~~~Gt~~Y~APE~~~ 543 (664)
.. .....+...+...+.+.-.++|+|||+.-.+|+| .... ..+...+|+.++|||+..
T Consensus 326 ~~--~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d~~l~s~~~~~~~~~~v~~~L~~~~~~~t~~~~~~~~~pev~~ 403 (829)
T KOG0576|consen 326 MT--VSEIALEQYQFAYPLRKETRPLAELHSSYKVHRDNILGSEEEVKLLDFAVPPQLTRTMKPRTAIGTPEPLAPEVIQ 403 (829)
T ss_pred CC--hhhHhhhhhhhhhhhhhhcccccccccccccCcccccccccccccccccCCcccCcccccccCCCCCCCCCchhhc
Confidence 10 1122344455566777788999999987666664 1100 134456889999999999
Q ss_pred cCCCCccchHHHHHHHHHHHHhCCCCC
Q 040814 544 NGIVSMKADVFSFGVLLLEIVSGRKNN 570 (664)
Q Consensus 544 ~~~~s~ksDVySfGvvL~ElltG~~p~ 570 (664)
+..+..+.|+|+.|+--.++--|-+|.
T Consensus 404 ~~~~~~~p~~~~~~~~~~~~ap~~pPr 430 (829)
T KOG0576|consen 404 ENTIDGCPDSGSLAVSAIQMAPGLPPR 430 (829)
T ss_pred ccccccCCCccCCCcchhhcCCCCCCC
Confidence 999999999999998777777777764
No 468
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=90.76 E-value=1.7 Score=42.21 Aligned_cols=42 Identities=29% Similarity=0.517 Sum_probs=34.1
Q ss_pred cccccccHHHHHHHhcCccccceeccCCC-cCEEEEEEcCCcEEEEEec
Q 040814 404 HELKGFNFQTIAAATNNFSTTNKLGEGGF-GPVYKGKLLDGQVIAVKRL 451 (664)
Q Consensus 404 ~~~~~~~~~~i~~~t~~~~~~~~lg~G~f-g~Vy~~~~~~~~~vavK~~ 451 (664)
..++.|+. .+.+++..+.||.|.. |.||++++ +|+.+|+|.+
T Consensus 27 PKL~~F~~-----h~~~I~flefLg~g~~~~~V~kv~I-~g~~YALKlf 69 (207)
T PF13095_consen 27 PKLEPFTH-----HGDDIEFLEFLGHGSHDGYVFKVEI-DGRIYALKLF 69 (207)
T ss_pred CCcCCcCC-----CCCcEeeeeecCCCCceeEEEEEEE-CCeEEEEEEe
Confidence 44555655 2277888999999999 99999999 6789999993
No 469
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=89.73 E-value=0.65 Score=46.91 Aligned_cols=99 Identities=19% Similarity=0.128 Sum_probs=66.2
Q ss_pred ccccceeccCCCcCEEEEEEcCCcEEEEEecccc------------------------------------eEEEEeE--e
Q 040814 421 FSTTNKLGEGGFGPVYKGKLLDGQVIAVKRLSGR------------------------------------TIRLMGC--S 462 (664)
Q Consensus 421 ~~~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~------------------------------------~v~l~g~--~ 462 (664)
..+.++||-|.-+.||.|..+.|.++|||.-+-. +.+|... -
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 3456899999999999999999999999954310 0112111 1
Q ss_pred e----cCCeeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc
Q 040814 463 L----HGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT 527 (664)
Q Consensus 463 ~----~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~ 527 (664)
. .-+...+||||+++--|.. -.++-...-.|+..|++-+.-+-+.|.+|.|.++.|.
T Consensus 173 VP~P~~~nRHaVvMe~ieG~eL~~--------~r~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNI 233 (304)
T COG0478 173 VPKPIAWNRHAVVMEYIEGVELYR--------LRLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNI 233 (304)
T ss_pred CCCccccccceeeeehcccceeec--------ccCcccCHHHHHHHHHHHHHHHHHcCccccCCchheE
Confidence 1 1234579999999866532 1223444555566666666555688999999998873
No 470
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=89.48 E-value=0.69 Score=45.28 Aligned_cols=58 Identities=21% Similarity=0.237 Sum_probs=48.7
Q ss_pred eeEEEEeccCCC-chhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc
Q 040814 467 ERILVYEFMPNK-SLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT 527 (664)
Q Consensus 467 ~~~lV~Ey~~~g-sL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~ 527 (664)
.-+||+|++++- +|.+++.+. ..++...+..++.++++.+.-||+.++.|.|..+.|.
T Consensus 91 ~s~lite~l~~~~~L~~~~~~~---~~~~~~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NI 149 (206)
T PF06293_consen 91 RSYLITEALPGAQDLRDLLQQW---EQLDPSQRRELLRALARLIAKLHDAGIYHGDLNPSNI 149 (206)
T ss_pred eEEEEEEeCCCcccHHHHHHhh---cccchhhHHHHHHHHHHHHHHHHHCcCCCCCCCcccE
Confidence 357999999984 899988432 2367778889999999999999999999999998884
No 471
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=86.96 E-value=5 Score=39.26 Aligned_cols=82 Identities=21% Similarity=0.273 Sum_probs=63.2
Q ss_pred cceeccCCCcCEEEEEEcCCcEEEEEecccc----------------------eEEEEeEeec---CCeeEEEEeccCCC
Q 040814 424 TNKLGEGGFGPVYKGKLLDGQVIAVKRLSGR----------------------TIRLMGCSLH---GAERILVYEFMPNK 478 (664)
Q Consensus 424 ~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~----------------------~v~l~g~~~~---~~~~~lV~Ey~~~g 478 (664)
++.|+.|..+.||+....+ ..+++|..... ..+++.++.. ....+++||++++.
T Consensus 2 i~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~ 80 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD-GRYVLKFYRPPDAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGR 80 (239)
T ss_dssp EEEEEESSSSEEEEEEETT-SEEEEEEESSHHHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSE
T ss_pred CccCCCCCeeeEEEEEECC-cEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEeccc
Confidence 4679999999999999876 68999988542 2355654432 23468999999998
Q ss_pred chhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhc
Q 040814 479 SLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKY 515 (664)
Q Consensus 479 sL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~ 515 (664)
.+.. ..+......++.++++.|.-||+.
T Consensus 81 ~~~~---------~~~~~~~~~~~~~~~~~l~~lh~~ 108 (239)
T PF01636_consen 81 PLDD---------ELSPEQRPELLRQLGRALAQLHQV 108 (239)
T ss_dssp EHHH---------TSTHHHHHHHHHHHHHHHHHHHHS
T ss_pred cccc---------cccccccccccccchhhhhhcccc
Confidence 8865 456778889999999999999986
No 472
>PRK10593 hypothetical protein; Provisional
Probab=86.79 E-value=2.5 Score=43.96 Aligned_cols=83 Identities=13% Similarity=0.128 Sum_probs=58.8
Q ss_pred cceeccCCCcCEEEEEEcCCcEEEEEecccc-----------------------eEEEEeEeec---CCeeEEEEeccCC
Q 040814 424 TNKLGEGGFGPVYKGKLLDGQVIAVKRLSGR-----------------------TIRLMGCSLH---GAERILVYEFMPN 477 (664)
Q Consensus 424 ~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~-----------------------~v~l~g~~~~---~~~~~lV~Ey~~~ 477 (664)
.+.||.|..+.||+....+++ +.+|..+.. ..++++.|.. .+..+||||++++
T Consensus 19 ~~~i~~G~~~~vy~~~~~~~~-~~~k~~~~~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G 97 (297)
T PRK10593 19 VECISEQPYAALWALYDSQGN-PMPLMARSFSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLRG 97 (297)
T ss_pred eeecCCccceeEEEEEcCCCC-EEEEEecccccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccCC
Confidence 468999999999998775564 455544321 2467777654 3558999999999
Q ss_pred CchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhc
Q 040814 478 KSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKY 515 (664)
Q Consensus 478 gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~ 515 (664)
+++.+. ..+......+..+++++|+-||+.
T Consensus 98 ~~~~~~--------~~~~~~~~~l~~~l~~~La~LH~~ 127 (297)
T PRK10593 98 VSVEAP--------ARTPERWEQLKDQIVEGLLAWHRI 127 (297)
T ss_pred EecCCC--------CCCHHHHHHHHHHHHHHHHHHhCC
Confidence 887641 123344567778899999999984
No 473
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=86.78 E-value=3.2 Score=41.27 Aligned_cols=81 Identities=25% Similarity=0.215 Sum_probs=59.1
Q ss_pred ceeccCCCcCEEEEEEcCCcEEEEEecccc----------------------eEEEEeEeecCCeeEEEEeccCCCc-hh
Q 040814 425 NKLGEGGFGPVYKGKLLDGQVIAVKRLSGR----------------------TIRLMGCSLHGAERILVYEFMPNKS-LD 481 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~----------------------~v~l~g~~~~~~~~~lV~Ey~~~gs-L~ 481 (664)
..||+|..+.||+. .+..+++|..++. ..+.+.++...+...+|||+++|.. +.
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~~ 83 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGFDKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSFS 83 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccchh
Confidence 67999999999984 2446778887652 2456777767777789999999963 33
Q ss_pred HHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhc
Q 040814 482 FFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKY 515 (664)
Q Consensus 482 ~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~ 515 (664)
..+ ..+......++..+++.+.-||+.
T Consensus 84 ~~~-------~~~~~~~~~l~~~la~~l~~lH~~ 110 (226)
T TIGR02172 84 RII-------SDNPSRLEEIAKIFAEMAKKLHST 110 (226)
T ss_pred hhh-------cCCHHHHHHHHHHHHHHHHHHhCC
Confidence 332 234456677899999999999974
No 474
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=86.50 E-value=3.1 Score=41.68 Aligned_cols=123 Identities=20% Similarity=0.167 Sum_probs=75.6
Q ss_pred ccccHHHHHHHhcCccccce---eccCCCcCEEEEEEcCCcEEEEEecccce----------------------------
Q 040814 407 KGFNFQTIAAATNNFSTTNK---LGEGGFGPVYKGKLLDGQVIAVKRLSGRT---------------------------- 455 (664)
Q Consensus 407 ~~~~~~~i~~~t~~~~~~~~---lg~G~fg~Vy~~~~~~~~~vavK~~~~~~---------------------------- 455 (664)
...+++.+....+...+... |++|.-+.||+|...++..+|||++....
T Consensus 33 D~~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~ 112 (268)
T COG1718 33 DKRTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVF 112 (268)
T ss_pred hhHHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHH
Confidence 33455556655555555554 55777779999998889999999986421
Q ss_pred ----------EEEEeEee------cCCeeEEEEeccCCCchh-HHhhcccccCCCCHHHHHHHHHHHHHHHHHhhh-cCc
Q 040814 456 ----------IRLMGCSL------HGAERILVYEFMPNKSLD-FFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK-YSR 517 (664)
Q Consensus 456 ----------v~l~g~~~------~~~~~~lV~Ey~~~gsL~-~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~-~~~ 517 (664)
-+++..-. .-.+..|||||+....+. -.| +...+.......+..++++++.-|-. .+.
T Consensus 113 ~W~~kEf~NL~R~~eAGVrvP~Pi~~~~nVLvMEfIg~~g~pAP~L----kDv~~e~~e~~~~~~~~v~~~~~l~~~a~L 188 (268)
T COG1718 113 AWARKEFRNLKRAYEAGVRVPEPIAFRNNVLVMEFIGDDGLPAPRL----KDVPLELEEAEGLYEDVVEYMRRLYKEAGL 188 (268)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCceeecCCeEEEEeccCCCCCCCCc----ccCCcCchhHHHHHHHHHHHHHHHHHhcCc
Confidence 01111100 012347999999764221 111 11223333567778888888888776 889
Q ss_pred cccccccccccccccc
Q 040814 518 LRMNESKVNTNRVVGT 533 (664)
Q Consensus 518 ~h~d~~~~n~~~~~Gt 533 (664)
+|.|++..|.-.-.|+
T Consensus 189 VHgDLSEyNiL~~~~~ 204 (268)
T COG1718 189 VHGDLSEYNILVHDGE 204 (268)
T ss_pred ccccchhhheEEECCe
Confidence 9999999885433333
No 475
>PRK09902 hypothetical protein; Provisional
Probab=86.32 E-value=6.5 Score=38.58 Aligned_cols=98 Identities=15% Similarity=0.123 Sum_probs=68.7
Q ss_pred eccCCCcCEEEEEEcCCcEEEEEecccc------------------------------eEEEEeEee-c----CCeeEEE
Q 040814 427 LGEGGFGPVYKGKLLDGQVIAVKRLSGR------------------------------TIRLMGCSL-H----GAERILV 471 (664)
Q Consensus 427 lg~G~fg~Vy~~~~~~~~~vavK~~~~~------------------------------~v~l~g~~~-~----~~~~~lV 471 (664)
-|+||-+-|++-.+ +|+.+=+|+-... ..+.. ++. . .-.-+||
T Consensus 26 ~~rgG~SgV~r~~~-~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVER-NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEe-CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 46788889999877 4456888876521 11222 221 1 1235799
Q ss_pred EeccCC-CchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc
Q 040814 472 YEFMPN-KSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT 527 (664)
Q Consensus 472 ~Ey~~~-gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~ 527 (664)
+|-+++ .+|.+++.+. ...+.+...+..|+.+|++.+.-||+.+..|.+..+.+.
T Consensus 104 Te~L~g~~~L~~~l~~~-~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khI 159 (216)
T PRK09902 104 TEDMAGFISIADWYAQH-AVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHI 159 (216)
T ss_pred EEeCCCCccHHHHHhcC-CcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhhe
Confidence 997764 5898888432 223567788899999999999999999999998776664
No 476
>PLN02876 acyl-CoA dehydrogenase
Probab=85.81 E-value=2.9 Score=50.09 Aligned_cols=87 Identities=14% Similarity=0.192 Sum_probs=61.9
Q ss_pred cceeccCCCcCEEEEEEcCC---cEEEEEecccc--------------------------eEEEEeEeecC---CeeEEE
Q 040814 424 TNKLGEGGFGPVYKGKLLDG---QVIAVKRLSGR--------------------------TIRLMGCSLHG---AERILV 471 (664)
Q Consensus 424 ~~~lg~G~fg~Vy~~~~~~~---~~vavK~~~~~--------------------------~v~l~g~~~~~---~~~~lV 471 (664)
.+.++.|.+..+|+....++ +.+++|+.... ..+++.+|.+. ...++|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence 57789999999999887553 46777765321 24566776653 356899
Q ss_pred EeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhc
Q 040814 472 YEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKY 515 (664)
Q Consensus 472 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~ 515 (664)
|||+++..+.+- .-..++..++..++.++++.|..||+.
T Consensus 123 ME~v~G~~~~~~-----~~~~~~~~~r~~l~~~l~~~La~LH~v 161 (822)
T PLN02876 123 MEYLEGRIFVDP-----KLPGVAPERRRAIYRATAKVLAALHSA 161 (822)
T ss_pred EEecCCcccCCc-----cCCCCCHHHHHHHHHHHHHHHHHHhCC
Confidence 999998654321 112456677889999999999999974
No 477
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=85.59 E-value=0.24 Score=43.88 Aligned_cols=31 Identities=26% Similarity=0.357 Sum_probs=28.7
Q ss_pred cceeccCCCcCEEEEEEcCCcEEEEEecccc
Q 040814 424 TNKLGEGGFGPVYKGKLLDGQVIAVKRLSGR 454 (664)
Q Consensus 424 ~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~ 454 (664)
.+.|+.|+.|.||+|++++|+.||||+.++.
T Consensus 16 ~~PlasASiaQVh~a~l~~g~~VaVKV~rP~ 46 (119)
T PF03109_consen 16 PEPLASASIAQVHRARLKDGEEVAVKVQRPG 46 (119)
T ss_pred cchhhheehhhheeeeecccchhhhhhcchH
Confidence 3789999999999999999999999999885
No 478
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=85.03 E-value=0.63 Score=41.98 Aligned_cols=9 Identities=33% Similarity=0.933 Sum_probs=4.0
Q ss_pred CeEEeeehh
Q 040814 328 QWRVFVIVG 336 (664)
Q Consensus 328 ~~~~~~i~~ 336 (664)
+|+++++++
T Consensus 1 RW~l~~iii 9 (130)
T PF12273_consen 1 RWVLFAIII 9 (130)
T ss_pred CeeeHHHHH
Confidence 455543333
No 479
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=82.42 E-value=3.6 Score=43.60 Aligned_cols=101 Identities=21% Similarity=0.255 Sum_probs=69.1
Q ss_pred cceeccCCCcCEEEEEEcCCcEEEEEecccceE-------------EE-EeEeecCC-----------------------
Q 040814 424 TNKLGEGGFGPVYKGKLLDGQVIAVKRLSGRTI-------------RL-MGCSLHGA----------------------- 466 (664)
Q Consensus 424 ~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~~v-------------~l-~g~~~~~~----------------------- 466 (664)
...|..|.-+.||.+.-.+|..+|||+++..++ ++ .|||.+..
T Consensus 149 nGCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aGI 228 (520)
T KOG2270|consen 149 NGCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAGI 228 (520)
T ss_pred ccccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcCC
Confidence 356889999999999998999999999976542 22 34665522
Q ss_pred ---------eeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcC-ccccccccccc
Q 040814 467 ---------ERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYS-RLRMNESKVNT 527 (664)
Q Consensus 467 ---------~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~-~~h~d~~~~n~ 527 (664)
...|||+|+...... .-..+...++...+..+-.|+++-|.-|-+.| .+|.|+...|.
T Consensus 229 P~PePIlLk~hVLVM~FlGrdgw~---aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~ 296 (520)
T KOG2270|consen 229 PCPEPILLKNHVLVMEFLGRDGWA---APKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNL 296 (520)
T ss_pred CCCCceeeecceEeeeeccCCCCc---CcccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhh
Confidence 125999998643221 11123456777778888788888777776554 56888777774
No 480
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=71.98 E-value=5.8 Score=38.19 Aligned_cols=69 Identities=22% Similarity=0.100 Sum_probs=46.4
Q ss_pred ceEEEEeEeecCCeeEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhh---cCcccccccccc
Q 040814 454 RTIRLMGCSLHGAERILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK---YSRLRMNESKVN 526 (664)
Q Consensus 454 ~~v~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~---~~~~h~d~~~~n 526 (664)
...+++|.|- .++|.||.+.+++...-..-...-.-+|..|.+||.++++.+.+|+. ....-.|.++.|
T Consensus 21 ~~pk~lG~CG----~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~n 92 (188)
T PF12260_consen 21 PFPKLLGSCG----RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDN 92 (188)
T ss_pred CCCCeeeECC----CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHH
Confidence 4578889884 47899999987663210000112357899999999999999999997 232233555544
No 481
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=67.54 E-value=23 Score=35.30 Aligned_cols=80 Identities=14% Similarity=0.132 Sum_probs=55.9
Q ss_pred eeccCCC-cCEEEEEEcCCcEEEEEecccc--------------------eEEEEeEeecCCeeEEEEeccCCCchhHHh
Q 040814 426 KLGEGGF-GPVYKGKLLDGQVIAVKRLSGR--------------------TIRLMGCSLHGAERILVYEFMPNKSLDFFI 484 (664)
Q Consensus 426 ~lg~G~f-g~Vy~~~~~~~~~vavK~~~~~--------------------~v~l~g~~~~~~~~~lV~Ey~~~gsL~~~l 484 (664)
.|..|.. ..||+...+ +..+.||+.... ..+++++...++..++|||+++|.+|....
T Consensus 5 ~~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~ 83 (244)
T cd05150 5 RVTEGQSGATVYRLDGK-NPGLYLKIAPSGPTYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAALW 83 (244)
T ss_pred ecCCCCCcCeEEEEcCC-CCcEEEEecCCCcccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHhh
Confidence 4555555 688998764 467888876542 235666666656678999999998885432
Q ss_pred hcccccCCCCHHHHHHHHHHHHHHHHHhhhc
Q 040814 485 FDSVKKKQLNWSKRITIIEGIAQGLIYLHKY 515 (664)
Q Consensus 485 ~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~ 515 (664)
. ...+..++.++++.|.-||+.
T Consensus 84 ~---------~~~~~~~~~~l~~~l~~lH~i 105 (244)
T cd05150 84 E---------ELEPERLVDALAEALRRLHAL 105 (244)
T ss_pred c---------ccCHHHHHHHHHHHHHHHhcC
Confidence 1 123457889999999999974
No 482
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=66.73 E-value=21 Score=38.78 Aligned_cols=80 Identities=18% Similarity=0.218 Sum_probs=50.8
Q ss_pred cceeccCCCcCEEEEEEcCC-cEEEEEecccc--------------------------------eEEEEeEeecCCeeEE
Q 040814 424 TNKLGEGGFGPVYKGKLLDG-QVIAVKRLSGR--------------------------------TIRLMGCSLHGAERIL 470 (664)
Q Consensus 424 ~~~lg~G~fg~Vy~~~~~~~-~~vavK~~~~~--------------------------------~v~l~g~~~~~~~~~l 470 (664)
.+.||.|.+..||++...+| +.|+||.-.+. ..+++.+ +.+..++
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~l 108 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVT 108 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEE
Confidence 36799999999999999776 58999973210 1334444 3455789
Q ss_pred EEeccCCCc-hhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhh
Q 040814 471 VYEFMPNKS-LDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLH 513 (664)
Q Consensus 471 V~Ey~~~gs-L~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH 513 (664)
||||+++.. +.+.|.. .... -.++.+|...|.-+|
T Consensus 109 VME~L~~~~~lr~~Ll~---g~~~-----p~~a~~iG~~LA~~~ 144 (401)
T PRK09550 109 VMEDLSDHKILRKGLID---GKKY-----PKLAEHIGEFLARTL 144 (401)
T ss_pred EEecCCCccHHHHHHhc---CCcc-----HHHHHHHHHHHHHHH
Confidence 999998754 5555532 1111 234455555555555
No 483
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=66.54 E-value=7.4 Score=37.05 Aligned_cols=56 Identities=20% Similarity=0.267 Sum_probs=38.8
Q ss_pred cceeccCCCcCEEEEEEcCCcEEEEEecccc--------------e-------EEEEeEeecCCeeEEEEeccCCCchhH
Q 040814 424 TNKLGEGGFGPVYKGKLLDGQVIAVKRLSGR--------------T-------IRLMGCSLHGAERILVYEFMPNKSLDF 482 (664)
Q Consensus 424 ~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~--------------~-------v~l~g~~~~~~~~~lV~Ey~~~gsL~~ 482 (664)
.+.|++|.+|.||+|.+. |..+|+|+-... + -+++.+- +..+.|||..|-.|..
T Consensus 27 ~~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~ds~r~~l~kEakiLeil~g~~~~p~vy~yg----~~~i~me~i~G~~L~~ 101 (201)
T COG2112 27 EKELAKGTTSVVYLGEWR-GGEVALKVRRRDSPRRNLEKEAKILEILAGEGVTPEVYFYG----EDFIRMEYIDGRPLGK 101 (201)
T ss_pred hhhhhcccccEEEEeecc-CceEEEEEecCCcchhhHHHHHHHHHHhhhcCCCceEEEec----hhhhhhhhhcCcchhh
Confidence 478999999999999984 557888866431 0 2233332 2345599999988866
Q ss_pred Hh
Q 040814 483 FI 484 (664)
Q Consensus 483 ~l 484 (664)
.-
T Consensus 102 ~~ 103 (201)
T COG2112 102 LE 103 (201)
T ss_pred hh
Confidence 54
No 484
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=64.35 E-value=30 Score=34.10 Aligned_cols=78 Identities=22% Similarity=0.265 Sum_probs=51.9
Q ss_pred cceeccCCCcCEEEEEEcC--CcEEEEEecccc----------------------eEEEEeEeecCCeeEEEEeccCCCc
Q 040814 424 TNKLGEGGFGPVYKGKLLD--GQVIAVKRLSGR----------------------TIRLMGCSLHGAERILVYEFMPNKS 479 (664)
Q Consensus 424 ~~~lg~G~fg~Vy~~~~~~--~~~vavK~~~~~----------------------~v~l~g~~~~~~~~~lV~Ey~~~gs 479 (664)
.+.|..|-...+|+....+ ++.+++|..... ..++++.+. ..+||||+++.+
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e~i~G~~ 78 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYEFIPGRT 78 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEEeeCCCc
Confidence 3567788888999998764 678889977542 133443332 247999998866
Q ss_pred hhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcC
Q 040814 480 LDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYS 516 (664)
Q Consensus 480 L~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~ 516 (664)
+..-. + ..-.++.++++.|.-||+..
T Consensus 79 l~~~~--------~---~~~~~~~~la~~l~~lH~~~ 104 (235)
T cd05157 79 LEPED--------L---RNPKIYRLIARELAKLHSIK 104 (235)
T ss_pred CCHHH--------c---cChHHHHHHHHHHHHHhccc
Confidence 64221 0 11346788999999999754
No 485
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=58.47 E-value=18 Score=39.00 Aligned_cols=55 Identities=13% Similarity=-0.040 Sum_probs=37.5
Q ss_pred eEEEEeccCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHh-hhcCcccccccccc
Q 040814 468 RILVYEFMPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYL-HKYSRLRMNESKVN 526 (664)
Q Consensus 468 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yL-H~~~~~h~d~~~~n 526 (664)
..||-+|+++-++..++. .+..++..+.+++.--+++|.-+ --.+.+|.|..|.|
T Consensus 320 ~vl~E~~~~Gl~v~~~v~----~~~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGN 375 (565)
T KOG1236|consen 320 LVLVETYERGLSVLRFVK----WKSQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGN 375 (565)
T ss_pred ceeeeeccccccHHhhhh----cccChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCc
Confidence 457778999999999983 34455556666666666665443 34567788877776
No 486
>KOG4649 consensus PQQ (pyrrolo-quinoline quinone) repeat protein [Secondary metabolites biosynthesis, transport and catabolism]
Probab=56.64 E-value=36 Score=34.18 Aligned_cols=47 Identities=28% Similarity=0.454 Sum_probs=34.6
Q ss_pred CCCCeEEEccCCCCCCCCC---CceEEEEeCCCceEEEcCCCCcEEEeec
Q 040814 82 YYKPPVWVANRNTPIFHKE---SASLTIDSKDGNLKILREGENPIAISSI 128 (664)
Q Consensus 82 ~~~tvVWvANr~~pv~~~~---~~~l~l~~~~G~L~l~~~~~~~vwss~~ 128 (664)
.+.++.|-|.|..|+-... +....++.-||+|.-.|..|+.||...+
T Consensus 167 ~~~~~~w~~~~~~PiF~splcv~~sv~i~~VdG~l~~f~~sG~qvwr~~t 216 (354)
T KOG4649|consen 167 YSSTEFWAATRFGPIFASPLCVGSSVIITTVDGVLTSFDESGRQVWRPAT 216 (354)
T ss_pred CCcceehhhhcCCccccCceeccceEEEEEeccEEEEEcCCCcEEEeecC
Confidence 3468999999999997521 2334444339999999999999996544
No 487
>smart00473 PAN_AP divergent subfamily of APPLE domains. Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions.
Probab=49.98 E-value=12 Score=29.45 Aligned_cols=25 Identities=36% Similarity=0.821 Sum_probs=18.9
Q ss_pred cC-CCcCccccccCCCCCCCccccc-CCC
Q 040814 277 TE-NCSCFACAPTNSVANTGCEFWS-KGA 303 (664)
Q Consensus 277 ~~-nCsC~ay~~~~~~~~~GC~~w~-~~l 303 (664)
+. +|+|.++.|.. .+.+|.+|. +.+
T Consensus 35 ~~~~~~C~s~~y~~--~~~~C~l~~~~~~ 61 (78)
T smart00473 35 LNSNCSCRSFTYNN--GTKGCLLWSESSL 61 (78)
T ss_pred CCCCCceEEEEEcC--CCCEEEEeeCCcc
Confidence 56 99999998864 356799998 443
No 488
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=47.32 E-value=14 Score=33.19 Aligned_cols=11 Identities=9% Similarity=0.440 Sum_probs=4.7
Q ss_pred ehhHHHHHHHH
Q 040814 334 IVGALLVLLMC 344 (664)
Q Consensus 334 i~~~~l~~~~~ 344 (664)
+.+++++++++
T Consensus 4 l~~iii~~i~l 14 (130)
T PF12273_consen 4 LFAIIIVAILL 14 (130)
T ss_pred eHHHHHHHHHH
Confidence 33444444443
No 489
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=47.01 E-value=74 Score=32.89 Aligned_cols=74 Identities=20% Similarity=0.242 Sum_probs=44.0
Q ss_pred ccceeccCCCcCEEEEEEcCCcEEEEEecccc----------------------eEEEEeEeecCCeeEEEEeccCCCch
Q 040814 423 TTNKLGEGGFGPVYKGKLLDGQVIAVKRLSGR----------------------TIRLMGCSLHGAERILVYEFMPNKSL 480 (664)
Q Consensus 423 ~~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~----------------------~v~l~g~~~~~~~~~lV~Ey~~~gsL 480 (664)
..+.++.|....+|+.. .+++.+-||.-... ..+.+++....+..+||+||++.+..
T Consensus 21 ~~~~v~GG~i~~a~~~~-~~~~~~FvK~~~~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~~~~~ 99 (288)
T PF03881_consen 21 SIEPVSGGDINEAYRLD-TDGGSYFVKVNSESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLEMGSP 99 (288)
T ss_dssp EEEEE--SSSSEEEEEE-TTS-EEEEEEEEGGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE-------
T ss_pred eeEecCCCChhheEEEE-CCCccEEEEecChhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeecCCCC
Confidence 35678989999999987 56888999977531 35677777666677999999976511
Q ss_pred hHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhh
Q 040814 481 DFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK 514 (664)
Q Consensus 481 ~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~ 514 (664)
..- -...+.++|+-||+
T Consensus 100 ----------~~~-------~~~~lg~~LA~LH~ 116 (288)
T PF03881_consen 100 ----------SPP-------DWEELGRQLAALHQ 116 (288)
T ss_dssp -----------CC-------HHHHHHHHHHHHHH
T ss_pred ----------Cch-------hHHHHHHHHHHHhh
Confidence 111 12456788888998
No 490
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=40.46 E-value=1.5e+02 Score=28.70 Aligned_cols=94 Identities=17% Similarity=0.191 Sum_probs=63.2
Q ss_pred cceeccCCCcCEEEEEEcCCcEEEEEecccc--------------------------------------------eEEEE
Q 040814 424 TNKLGEGGFGPVYKGKLLDGQVIAVKRLSGR--------------------------------------------TIRLM 459 (664)
Q Consensus 424 ~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~--------------------------------------------~v~l~ 459 (664)
...||+|+.-.||.- ++.....||++.+. +.+++
T Consensus 6 ~~~i~~G~~R~cy~H--P~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~ 83 (199)
T PF10707_consen 6 SDLIAQGGERDCYQH--PDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY 83 (199)
T ss_pred CcccccCCCceEEEC--CCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence 468999999999974 44455667766431 35678
Q ss_pred eEeecCCeeEEEEeccCC--C----chhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhhcCccccccccccc
Q 040814 460 GCSLHGAERILVYEFMPN--K----SLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHKYSRLRMNESKVNT 527 (664)
Q Consensus 460 g~~~~~~~~~lV~Ey~~~--g----sL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~~~~~h~d~~~~n~ 527 (664)
|+...+...-+|+|.+.+ | +|.+++ +...++. ...+.+. +=..||-+..++..|.++.|.
T Consensus 84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l----~~~~~~~-~~~~~L~---~f~~~l~~~~Iv~~dl~~~NI 149 (199)
T PF10707_consen 84 GFVETNLGLGLVVELIRDADGNISPTLEDYL----KEGGLTE-ELRQALD---EFKRYLLDHHIVIRDLNPHNI 149 (199)
T ss_pred EEEecCCceEEEEEEEECCCCCcCccHHHHH----HcCCccH-HHHHHHH---HHHHHHHHcCCeecCCCcccE
Confidence 888888888899987633 3 466666 3345555 3333333 445677788888889888884
No 491
>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []. Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process
Probab=39.70 E-value=66 Score=32.57 Aligned_cols=79 Identities=20% Similarity=0.256 Sum_probs=51.2
Q ss_pred ceeccCCCcCEEEEEEcCCcEEEEEecccc--------------------eEEEEeEeecCCeeEEEEecc-CCCchhHH
Q 040814 425 NKLGEGGFGPVYKGKLLDGQVIAVKRLSGR--------------------TIRLMGCSLHGAERILVYEFM-PNKSLDFF 483 (664)
Q Consensus 425 ~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~--------------------~v~l~g~~~~~~~~~lV~Ey~-~~gsL~~~ 483 (664)
..+..|..+.|+.++..+|++.++|...+. .|+++..- .+...|++|.+ ++.+|.+.
T Consensus 8 ~~~~~g~~s~V~pv~~~dG~~avLKl~~p~~~~~~E~~g~~~L~~w~G~GaVrll~~d--~~~~AlLLErl~~g~~L~~~ 85 (253)
T PF04655_consen 8 GPPAHGSSSLVVPVRRADGTPAVLKLAPPHAEAEHEARGEAALRWWNGRGAVRLLAAD--PERGALLLERLDPGRSLASL 85 (253)
T ss_pred CCCCCCcceEEEEEEcCCCCeEEEEecCCcccchhhhhHHhHhheeCCCCceeeeccc--cccchhhhhhccCCCchhhc
Confidence 456778899999999999999999998742 24555443 23467888888 45566544
Q ss_pred hhcccccCCCCHHHHHHHHHHHHHHHHHhhh
Q 040814 484 IFDSVKKKQLNWSKRITIIEGIAQGLIYLHK 514 (664)
Q Consensus 484 l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~ 514 (664)
..+ -.-.++..|+.++++ -||.
T Consensus 86 ~~~------g~d~~a~~i~a~l~~---~L~~ 107 (253)
T PF04655_consen 86 PRE------GDDDEATRIAAGLLR---RLHR 107 (253)
T ss_pred ccc------cCchHHHHHHHHHHH---HHhC
Confidence 311 112455666665544 4564
No 492
>PF15102 TMEM154: TMEM154 protein family
Probab=38.84 E-value=17 Score=33.07 Aligned_cols=13 Identities=8% Similarity=0.365 Sum_probs=5.7
Q ss_pred HHHhhhhhhcccc
Q 040814 345 ILCCLTWRKYKEK 357 (664)
Q Consensus 345 ~~~~~~~rr~~~~ 357 (664)
+++++++||+|.+
T Consensus 76 V~lv~~~kRkr~K 88 (146)
T PF15102_consen 76 VCLVIYYKRKRTK 88 (146)
T ss_pred HHheeEEeecccC
Confidence 3444444444443
No 493
>PLN02756 S-methyl-5-thioribose kinase
Probab=38.70 E-value=1.4e+02 Score=32.57 Aligned_cols=81 Identities=10% Similarity=0.046 Sum_probs=52.4
Q ss_pred cceeccCCCcCEEEEEEcCCcEEEEEecccc--------------------------------eEEEEeEeecCCeeEEE
Q 040814 424 TNKLGEGGFGPVYKGKLLDGQVIAVKRLSGR--------------------------------TIRLMGCSLHGAERILV 471 (664)
Q Consensus 424 ~~~lg~G~fg~Vy~~~~~~~~~vavK~~~~~--------------------------------~v~l~g~~~~~~~~~lV 471 (664)
.+.||.|....||+.... ++.++||+-.+. ..+++.+|. +..+++
T Consensus 37 ~~eiggGn~N~VyrV~~~-~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~vlv 113 (418)
T PLN02756 37 IKEVGDGNLNFVYIVVSS-SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMALIG 113 (418)
T ss_pred EEEcCCCceeeEEEEEcC-CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCEEE
Confidence 478899999999998864 556889866411 235666665 456889
Q ss_pred EeccCC--CchhHHhhcccccCCCCHHHHHHHHHHHHHHHHH
Q 040814 472 YEFMPN--KSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIY 511 (664)
Q Consensus 472 ~Ey~~~--gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~y 511 (664)
|||+++ ..+.+-+- .+......+..|...+++.|-|
T Consensus 114 ME~L~~~~~ilr~~Ll----~G~~~p~~a~~ig~~la~tLf~ 151 (418)
T PLN02756 114 MRYLEPPHIILRKGLI----AGIEYPLLAEHMSDYMAKTLFF 151 (418)
T ss_pred EeecCCcceehhhhhc----cCCCCHHHHHHHHHHHHHHHhh
Confidence 999977 35555552 2222245556666666666444
No 494
>PF02009 Rifin_STEVOR: Rifin/stevor family; InterPro: IPR002858 Malaria is still a major cause of mortality in many areas of the world. Plasmodium falciparum causes the most severe human form of the disease and is responsible for most fatalities. Severe cases of malaria can occur when the parasite invades and then proliferates within red blood cell erythrocytes. The parasite produces many variant antigenic proteins, encoded by multigene families, which are present on the surface of the infected erythrocyte and play important roles in virulence. A crucial survival mechanism for the malaria parasite is its ability to evade the immune response by switching these variant surface antigens. The high virulence of P. falciparum relative to other malarial parasites is in large part due to the fact that in this organism many of these surface antigens mediate the binding of infected erythrocytes to the vascular endothelium (cytoadherence) and non-infected erythrocytes (rosetting). This can lead to the accumulation of infected cells in the vasculature of a variety of organs, blocking the blood flow and reducing the oxygen supply. Clinical symptoms of severe infection can include fever, progressive anaemia, multi-organ dysfunction and coma. For more information see []. Several multicopy gene families have been described in Plasmodium falciparum, including the stevor family of subtelomeric open reading frames and the rif interspersed repetitive elements. Both families contain three predicted transmembrane segments. It has been proposed that stevor and rif are members of a larger superfamily that code for variant surface antigens [].
Probab=38.63 E-value=17 Score=37.62 Aligned_cols=16 Identities=25% Similarity=0.436 Sum_probs=9.2
Q ss_pred HHHHHHhhhhhhcccc
Q 040814 342 LMCILCCLTWRKYKEK 357 (664)
Q Consensus 342 ~~~~~~~~~~rr~~~~ 357 (664)
++++.++|++||+++.
T Consensus 272 MvIIYLILRYRRKKKm 287 (299)
T PF02009_consen 272 MVIIYLILRYRRKKKM 287 (299)
T ss_pred HHHHHHHHHHHHHhhh
Confidence 3445566777775543
No 495
>TIGR01478 STEVOR variant surface antigen, stevor family. This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.
Probab=38.31 E-value=16 Score=36.87 Aligned_cols=16 Identities=25% Similarity=0.497 Sum_probs=9.6
Q ss_pred HHHHHHHhhhhhhccc
Q 040814 341 LLMCILCCLTWRKYKE 356 (664)
Q Consensus 341 ~~~~~~~~~~~rr~~~ 356 (664)
++++++++|.+|||++
T Consensus 273 vvliiLYiWlyrrRK~ 288 (295)
T TIGR01478 273 VVLIILYIWLYRRRKK 288 (295)
T ss_pred HHHHHHHHHHHHhhcc
Confidence 4455666677776553
No 496
>PTZ00370 STEVOR; Provisional
Probab=37.38 E-value=17 Score=36.79 Aligned_cols=16 Identities=25% Similarity=0.490 Sum_probs=9.7
Q ss_pred HHHHHHHhhhhhhccc
Q 040814 341 LLMCILCCLTWRKYKE 356 (664)
Q Consensus 341 ~~~~~~~~~~~rr~~~ 356 (664)
++++++++|.+|||++
T Consensus 269 vvliilYiwlyrrRK~ 284 (296)
T PTZ00370 269 VVLIILYIWLYRRRKN 284 (296)
T ss_pred HHHHHHHHHHHHhhcc
Confidence 4455666777776653
No 497
>PF04478 Mid2: Mid2 like cell wall stress sensor; InterPro: IPR007567 This family represents a region near the C terminus of Mid2, which contains a transmembrane region. The remainder of the protein sequence is serine-rich and of low complexity, and is therefore impossible to align accurately. Mid2 is thought to act as a mechanosensor of cell wall stress. The C-terminal cytoplasmic region of Mid2 is known to interact with Rom2, a guanine nucleotide exchange factor (GEF) for Rho1, which is part of the cell wall integrity signalling pathway [].
Probab=37.06 E-value=19 Score=32.98 Aligned_cols=7 Identities=57% Similarity=0.880 Sum_probs=2.9
Q ss_pred EEe-eehh
Q 040814 330 RVF-VIVG 336 (664)
Q Consensus 330 ~~~-~i~~ 336 (664)
+++ +++|
T Consensus 50 IVIGvVVG 57 (154)
T PF04478_consen 50 IVIGVVVG 57 (154)
T ss_pred EEEEEEec
Confidence 444 4443
No 498
>PF11883 DUF3403: Domain of unknown function (DUF3403); InterPro: IPR021820 This functionally uncharacterised domain of around 50 amino acids is found in the C terminus of eukaryotic S-locus receptor kinase proteins. ; GO: 0004674 protein serine/threonine kinase activity
Probab=36.39 E-value=20 Score=26.05 Aligned_cols=17 Identities=24% Similarity=0.159 Sum_probs=14.3
Q ss_pred ccCCCCCCCccccCCCC
Q 040814 647 LLLRSSKVPRINQGIIV 663 (664)
Q Consensus 647 ~~~~~p~~p~~~~~~~~ 663 (664)
..||.|++|.|+.++.+
T Consensus 4 ~~LP~PKqPgF~~~r~~ 20 (48)
T PF11883_consen 4 ATLPQPKQPGFFTGRSP 20 (48)
T ss_pred ccCCCCCCCCEEeEcCC
Confidence 37999999999987754
No 499
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=34.55 E-value=58 Score=20.41 Aligned_cols=21 Identities=29% Similarity=0.653 Sum_probs=0.0
Q ss_pred eEEEEeCCCceEEEcCCCCcEE
Q 040814 103 SLTIDSKDGNLKILREGENPIA 124 (664)
Q Consensus 103 ~l~l~~~~G~L~l~~~~~~~vw 124 (664)
.+.++. +|++++.|.++.-||
T Consensus 6 gvav~~-~g~i~VaD~~n~rV~ 26 (28)
T PF01436_consen 6 GVAVDS-DGNIYVADSGNHRVQ 26 (28)
T ss_dssp EEEEET-TSEEEEEECCCTEEE
T ss_pred EEEEeC-CCCEEEEECCCCEEE
No 500
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=32.71 E-value=1e+02 Score=31.65 Aligned_cols=76 Identities=25% Similarity=0.329 Sum_probs=0.0
Q ss_pred cceeccCCCcCEEEEEEcC-------CcEEEEEecccc----------------------eEEEEeEeecCCeeEEEEec
Q 040814 424 TNKLGEGGFGPVYKGKLLD-------GQVIAVKRLSGR----------------------TIRLMGCSLHGAERILVYEF 474 (664)
Q Consensus 424 ~~~lg~G~fg~Vy~~~~~~-------~~~vavK~~~~~----------------------~v~l~g~~~~~~~~~lV~Ey 474 (664)
++.+..|-...+|+....+ ++.+++|+.... ..++++++... +|+||
T Consensus 3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~~----~v~e~ 78 (302)
T cd05156 3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERNLGPKLYGIFPNG----RIEEF 78 (302)
T ss_pred EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCCCCCceEEEeCCC----chhhe
Q ss_pred cCCCchhHHhhcccccCCCCHHHHHHHHHHHHHHHHHhhh
Q 040814 475 MPNKSLDFFIFDSVKKKQLNWSKRITIIEGIAQGLIYLHK 514 (664)
Q Consensus 475 ~~~gsL~~~l~~~~~~~~l~~~~~~~I~~~ia~gL~yLH~ 514 (664)
++|..+....... -.++.++|+.|.-||+
T Consensus 79 i~G~~l~~~~~~~-----------~~~~~~ia~~L~~lH~ 107 (302)
T cd05156 79 IPSRTLTTEELRD-----------PDISAEIARRMAKLHS 107 (302)
T ss_pred eCCCcCCHhHcCC-----------cHHHHHHHHHHHHhhC
Done!