Your job contains 1 sequence.
>040816
AVMLESQTIKHMVEDGCADSVIPLLNVRGTILSMVIEYLKKHVEAKTTEDDLKNWDVDFA
KLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQNDFTPEEEEEI
RTETPRAF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 040816
(128 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2165825 - symbol:ASK2 "AT5G42190" species:3702... 256 6.4e-37 2
TAIR|locus:2204435 - symbol:SKP1 "AT1G75950" species:3702... 378 6.5e-35 1
TAIR|locus:2124281 - symbol:SK11 "AT4G34210" species:3702... 358 8.5e-33 1
TAIR|locus:2139504 - symbol:SK12 "AT4G34470" species:3702... 348 9.8e-32 1
TAIR|locus:2198621 - symbol:SK4 "AT1G20140" species:3702 ... 340 6.9e-31 1
TAIR|locus:2080532 - symbol:SK13 "AT3G60010" species:3702... 330 7.9e-30 1
TAIR|locus:2050281 - symbol:SK3 "AT2G25700" species:3702 ... 329 1.0e-29 1
TAIR|locus:2080542 - symbol:SK5 "AT3G60020" species:3702 ... 314 3.9e-28 1
TAIR|locus:2093094 - symbol:SK10 "AT3G21860" species:3702... 312 6.4e-28 1
TAIR|locus:2056956 - symbol:SK14 "AT2G03170" species:3702... 308 1.7e-27 1
TAIR|locus:2093084 - symbol:SK9 "AT3G21850" species:3702 ... 306 2.8e-27 1
TAIR|locus:2056931 - symbol:SK16 "AT2G03190" species:3702... 173 2.1e-25 2
DICTYBASE|DDB_G0269230 - symbol:fpaA "ubiquitin ligase su... 283 7.6e-25 1
DICTYBASE|DDB_G0273615 - symbol:fpaB-2 "ubiquitin ligase ... 280 1.6e-24 1
DICTYBASE|DDB_G0273251 - symbol:fpaB-1 "ubiquitin ligase ... 280 1.6e-24 1
TAIR|locus:2056966 - symbol:SK19 "AT2G03160" species:3702... 176 2.4e-24 2
FB|FBgn0025637 - symbol:skpA "skpA" species:7227 "Drosoph... 274 6.8e-24 1
WB|WBGene00004807 - symbol:skr-1 species:6239 "Caenorhabd... 266 4.8e-23 1
UNIPROTKB|G5ECU1 - symbol:skr-1 "Protein SKR-1" species:6... 266 4.8e-23 1
TAIR|locus:2093064 - symbol:SK8 "AT3G21830" species:3702 ... 264 7.8e-23 1
UNIPROTKB|Q5ZKF5 - symbol:SKP1 "S-phase kinase-associated... 263 1.0e-22 1
UNIPROTKB|Q3ZCF3 - symbol:SKP1 "S-phase kinase-associated... 263 1.0e-22 1
UNIPROTKB|E2RRW0 - symbol:SKP1 "Uncharacterized protein" ... 263 1.0e-22 1
UNIPROTKB|F8W8N3 - symbol:SKP1 "S-phase kinase-associated... 263 1.0e-22 1
UNIPROTKB|P63208 - symbol:SKP1 "S-phase kinase-associated... 263 1.0e-22 1
UNIPROTKB|P63209 - symbol:SKP1 "S-phase kinase-associated... 263 1.0e-22 1
UNIPROTKB|Q4R5B9 - symbol:SKP1 "S-phase kinase-associated... 263 1.0e-22 1
UNIPROTKB|Q5R512 - symbol:SKP1 "S-phase kinase-associated... 263 1.0e-22 1
UNIPROTKB|Q71U00 - symbol:skp1 "S-phase kinase-associated... 263 1.0e-22 1
MGI|MGI:103575 - symbol:Skp1a "S-phase kinase-associated ... 263 1.0e-22 1
RGD|1359648 - symbol:Skp1 "S-phase kinase-associated prot... 263 1.0e-22 1
ZFIN|ZDB-GENE-040426-1707 - symbol:skp1 "S-phase kinase-a... 263 1.0e-22 1
FB|FBgn0026176 - symbol:skpB "skpB" species:7227 "Drosoph... 261 1.6e-22 1
ASPGD|ASPL0000044827 - symbol:sconC species:162425 "Emeri... 257 4.3e-22 1
FB|FBgn0034863 - symbol:skpF "skpF" species:7227 "Drosoph... 255 7.0e-22 1
TAIR|locus:2061709 - symbol:MEO "AT2G20160" species:3702 ... 254 9.0e-22 1
UNIPROTKB|E7ERH2 - symbol:SKP1 "S-phase kinase-associated... 245 8.0e-21 1
WB|WBGene00004808 - symbol:skr-2 species:6239 "Caenorhabd... 243 1.3e-20 1
UNIPROTKB|G5EDD8 - symbol:skr-2 "SKR-2" species:6239 "Cae... 243 1.3e-20 1
UNIPROTKB|G4N3J5 - symbol:MGG_04978 "E3 ubiquitin ligase ... 240 2.7e-20 1
UNIPROTKB|G3MZV0 - symbol:G3MZV0 "Uncharacterized protein... 237 5.7e-20 1
POMBASE|SPBC409.05 - symbol:skp1 "SCF ubiquitin ligase co... 235 9.2e-20 1
WB|WBGene00004809 - symbol:skr-3 species:6239 "Caenorhabd... 231 2.5e-19 1
SGD|S000002736 - symbol:SKP1 "Evolutionarily conserved ki... 230 3.1e-19 1
TAIR|locus:2085201 - symbol:SK6 "AT3G53060" species:3702 ... 223 1.7e-18 1
FB|FBgn0026175 - symbol:skpC "skpC" species:7227 "Drosoph... 222 2.2e-18 1
UNIPROTKB|E5RJR5 - symbol:SKP1 "S-phase kinase-associated... 222 2.2e-18 1
TAIR|locus:2093074 - symbol:SK7 "AT3G21840" species:3702 ... 219 4.6e-18 1
CGD|CAL0001786 - symbol:SKP1 species:5476 "Candida albica... 216 9.5e-18 1
WB|WBGene00004811 - symbol:skr-5 species:6239 "Caenorhabd... 216 9.5e-18 1
WB|WBGene00004814 - symbol:skr-8 species:6239 "Caenorhabd... 214 1.6e-17 1
WB|WBGene00004813 - symbol:skr-7 species:6239 "Caenorhabd... 213 2.0e-17 1
FB|FBgn0026174 - symbol:skpD "skpD" species:7227 "Drosoph... 211 3.2e-17 1
WB|WBGene00004815 - symbol:skr-9 species:6239 "Caenorhabd... 210 4.1e-17 1
WB|WBGene00004816 - symbol:skr-10 species:6239 "Caenorhab... 207 8.6e-17 1
TAIR|locus:2102370 - symbol:SK15 "AT3G25650" species:3702... 191 4.2e-15 1
WB|WBGene00004810 - symbol:skr-4 species:6239 "Caenorhabd... 191 4.2e-15 1
WB|WBGene00004818 - symbol:skr-12 species:6239 "Caenorhab... 183 3.0e-14 1
WB|WBGene00004812 - symbol:skr-6 species:6239 "Caenorhabd... 180 6.2e-14 1
WB|WBGene00004820 - symbol:skr-14 species:6239 "Caenorhab... 180 6.2e-14 1
WB|WBGene00004819 - symbol:skr-13 species:6239 "Caenorhab... 179 7.9e-14 1
WB|WBGene00004823 - symbol:skr-17 species:6239 "Caenorhab... 161 6.4e-12 1
FB|FBgn0031074 - symbol:skpE "skpE" species:7227 "Drosoph... 154 3.5e-11 1
WB|WBGene00004821 - symbol:skr-15 species:6239 "Caenorhab... 145 3.2e-10 1
WB|WBGene00004822 - symbol:skr-16 species:6239 "Caenorhab... 138 1.8e-09 1
WB|WBGene00004826 - symbol:skr-20 species:6239 "Caenorhab... 137 2.2e-09 1
UNIPROTKB|G5EE98 - symbol:skr-20 "Protein SKR-20" species... 137 2.2e-09 1
TAIR|locus:505006407 - symbol:SK21 "AT3G61415" species:37... 142 3.1e-09 1
TAIR|locus:2050709 - symbol:SK20 "AT2G45950" species:3702... 141 4.1e-09 1
DICTYBASE|DDB_G0284889 - symbol:DDB_G0284889 species:4468... 125 2.9e-07 1
WB|WBGene00004825 - symbol:skr-19 species:6239 "Caenorhab... 102 1.1e-05 1
WB|WBGene00018935 - symbol:skr-18 species:6239 "Caenorhab... 97 5.9e-05 1
FB|FBgn0034904 - symbol:CG15800 species:7227 "Drosophila ... 91 0.00017 1
UNIPROTKB|E5RGM3 - symbol:SKP1 "S-phase kinase-associated... 89 0.00027 1
>TAIR|locus:2165825 [details] [associations]
symbol:ASK2 "AT5G42190" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0005737
"cytoplasm" evidence=NAS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA;RCA;TAS] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009793 "embryo development ending in seed
dormancy" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0042752 "regulation of circadian rhythm"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0019048 GO:GO:0007059 GO:GO:0009734
GO:GO:0009873 GO:GO:0009793 GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 EMBL:AB017067 GO:GO:0006511
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
UniGene:At.23304 OMA:KNWDADF EMBL:U97021 EMBL:AF059295
EMBL:BT004798 EMBL:AK227773 IPI:IPI00540947 RefSeq:NP_568603.1
UniGene:At.71056 ProteinModelPortal:Q9FHW7 SMR:Q9FHW7
DIP:DIP-31326N IntAct:Q9FHW7 STRING:Q9FHW7 PaxDb:Q9FHW7
PRIDE:Q9FHW7 EnsemblPlants:AT5G42190.1 GeneID:834224
KEGG:ath:AT5G42190 GeneFarm:4982 TAIR:At5g42190 InParanoid:Q9FHW7
PhylomeDB:Q9FHW7 ProtClustDB:CLSN2917730 Genevestigator:Q9FHW7
GermOnline:AT5G42190 Uniprot:Q9FHW7
Length = 171
Score = 256 (95.2 bits), Expect = 6.4e-37, Sum P(2) = 6.4e-37
Identities = 47/70 (67%), Positives = 61/70 (87%)
Query: 43 VEAKTTEDDLKNWDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEI 102
V + ++++DLK WD +F K+ Q TLFDL++AANYL+IK LLDL CQTVADMIKGK+PEEI
Sbjct: 85 VASGSSDEDLKTWDSEFIKVDQGTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEI 144
Query: 103 RQTFHIQNDF 112
R+TF+I+NDF
Sbjct: 145 RKTFNIKNDF 154
Score = 157 (60.3 bits), Expect = 6.4e-37, Sum P(2) = 6.4e-37
Identities = 35/54 (64%), Positives = 39/54 (72%)
Query: 1 AVMLESQTIKHMVEDGCADSVIPLLNVRGTILSMVIEYLKKHVEA----KTTED 50
AV LESQTIKHM+ED C D+ IPL NV ILS VIEY K+HVEA +TT D
Sbjct: 22 AVALESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYCKRHVEAAEKSETTAD 75
>TAIR|locus:2204435 [details] [associations]
symbol:SKP1 "AT1G75950" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA;NAS]
[GO:0005737 "cytoplasm" evidence=NAS] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007140 "male meiosis" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=TAS] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0045910 "negative regulation of DNA recombination"
evidence=IMP] [GO:0046686 "response to cadmium ion" evidence=IEP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0000226 "microtubule cytoskeleton organization"
evidence=IMP] [GO:0007067 "mitosis" evidence=RCA;TAS] [GO:0042023
"DNA endoreduplication" evidence=RCA] [GO:0042752 "regulation of
circadian rhythm" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051510
"regulation of unidimensional cell growth" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0007275 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005634 GO:GO:0046686 GO:GO:0019048
GO:GO:0007059 GO:GO:0000226 GO:GO:0009734 GO:GO:0009873
GO:GO:0005819 EMBL:AC007396 GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 eggNOG:COG5201
HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 GO:GO:0009524 GO:GO:0045910
PDB:3OGK PDB:3OGL PDB:3OGM PDBsum:3OGK PDBsum:3OGL PDBsum:3OGM
PDB:2P1N PDB:2P1O PDB:2P1Q PDBsum:2P1N PDBsum:2P1O PDBsum:2P1Q
EMBL:U60981 EMBL:U97020 EMBL:AF059294 EMBL:AY080884 EMBL:AY113971
EMBL:U70034 IPI:IPI00540205 PIR:T51309 RefSeq:NP_565123.1
UniGene:At.23531 PDB:2P1M PDB:2P1P PDB:3C6N PDB:3C6O PDB:3C6P
PDBsum:2P1M PDBsum:2P1P PDBsum:3C6N PDBsum:3C6O PDBsum:3C6P
ProteinModelPortal:Q39255 SMR:Q39255 DIP:DIP-31325N IntAct:Q39255
STRING:Q39255 PaxDb:Q39255 PRIDE:Q39255 EnsemblPlants:AT1G75950.1
GeneID:843928 KEGG:ath:AT1G75950 GeneFarm:4981 TAIR:At1g75950
InParanoid:Q39255 OMA:DDLKAWD PhylomeDB:Q39255
EvolutionaryTrace:Q39255 Genevestigator:Q39255 GermOnline:AT1G75950
Uniprot:Q39255
Length = 160
Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
Identities = 78/123 (63%), Positives = 93/123 (75%)
Query: 1 AVMLESQTIKHMVEDGCADSVIPLLNVRGTILSMVIEYLKKHVEAK-----------TTE 49
AV LESQTI HMVED C D+ +PL NV IL+ VIEY K+HVEA T++
Sbjct: 21 AVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSD 80
Query: 50 DDLKNWDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQ 109
DDLK WD DF K+ Q TLF+L++AANYL+IK+LLDL CQTVADMIKGK+PEEIR TF+I+
Sbjct: 81 DDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIK 140
Query: 110 NDF 112
NDF
Sbjct: 141 NDF 143
>TAIR|locus:2124281 [details] [associations]
symbol:SK11 "AT4G34210" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 EMBL:AL021961
EMBL:AL161585 HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 EMBL:DQ446893 EMBL:DQ653243 IPI:IPI00541308
PIR:T05415 RefSeq:NP_567959.1 UniGene:At.54598
ProteinModelPortal:O49484 SMR:O49484 IntAct:O49484 STRING:O49484
EnsemblPlants:AT4G34210.1 GeneID:829569 KEGG:ath:AT4G34210
TAIR:At4g34210 InParanoid:O49484 OMA:HHVDEAN PhylomeDB:O49484
ProtClustDB:CLSN2689755 Genevestigator:O49484 Uniprot:O49484
Length = 152
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 74/115 (64%), Positives = 86/115 (74%)
Query: 1 AVMLESQTIKHMVEDGCADSVIPLLNVRGTILSMVIEYLKKHV--EAKT-TEDDLKNWDV 57
AV ++SQTI HMVED C IPL NV IL VIEY KKH EA +E+DL NWD
Sbjct: 21 AVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKKHHVDEANPISEEDLNNWDE 80
Query: 58 DFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQNDF 112
F L Q T+F+L++AANYL+IKSLLDL CQTVADMIKGK+PEEIR TF+I+NDF
Sbjct: 81 KFMDLEQSTIFELILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRSTFNIENDF 135
>TAIR|locus:2139504 [details] [associations]
symbol:SK12 "AT4G34470" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISS]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 EMBL:AL161585
EMBL:AL023094 HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 ProtClustDB:CLSN2689755 IPI:IPI00526402 PIR:T05267
RefSeq:NP_567967.1 UniGene:At.65453 ProteinModelPortal:O65674
SMR:O65674 IntAct:O65674 STRING:O65674 EnsemblPlants:AT4G34470.1
GeneID:829598 KEGG:ath:AT4G34470 TAIR:At4g34470 InParanoid:O65674
OMA:IRRAFNI PhylomeDB:O65674 Genevestigator:O65674 Uniprot:O65674
Length = 152
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 73/115 (63%), Positives = 85/115 (73%)
Query: 1 AVMLESQTIKHMVEDGCADSVIPLLNVRGTILSMVIEYLKK-HV-EAKT-TEDDLKNWDV 57
AV ++SQTI HMVED C IPL NV IL VIEY KK HV EA +E+DL WD
Sbjct: 21 AVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKKYHVDEANPISEEDLNKWDE 80
Query: 58 DFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQNDF 112
F L Q T+F+L++AANYL+IKSL DL CQTVADMIKGK+PEEIR TF+I+NDF
Sbjct: 81 KFMDLEQSTIFELILAANYLNIKSLFDLTCQTVADMIKGKTPEEIRSTFNIENDF 135
>TAIR|locus:2198621 [details] [associations]
symbol:SK4 "AT1G20140" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005737 GO:GO:0005730
GO:GO:0016567 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 GO:GO:0019005 EMBL:AC022472 HSSP:P63208
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
UniGene:At.26484 ProtClustDB:CLSN2687877 EMBL:AY058205
EMBL:AY098980 IPI:IPI00526578 PIR:B86335 RefSeq:NP_564105.1
UniGene:At.26612 ProteinModelPortal:Q9LNT9 SMR:Q9LNT9 IntAct:Q9LNT9
STRING:Q9LNT9 PRIDE:Q9LNT9 EnsemblPlants:AT1G20140.1 GeneID:838604
KEGG:ath:AT1G20140 TAIR:At1g20140 InParanoid:Q9LNT9 OMA:SAENDEL
Genevestigator:Q9LNT9 Uniprot:Q9LNT9
Length = 163
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 69/124 (55%), Positives = 89/124 (71%)
Query: 1 AVMLESQTIKHMVEDGCADSVIPLLNVRGTILSMVIEYLKKHVEA------------KTT 48
AV ++SQTIKHM+ED CAD+ IPL NV G IL+ VIEY KKHVEA
Sbjct: 23 AVAVKSQTIKHMIEDDCADNGIPLPNVTGAILAKVIEYCKKHVEAAAEAGGDKDFYGSAE 82
Query: 49 EDDLKNWDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHI 108
D+LKNWD +F K+ Q TLFDL++AANYL+I LLDL C+ VAD ++GK+PE++R F+I
Sbjct: 83 NDELKNWDSEFVKVDQPTLFDLILAANYLNIGGLLDLTCKAVADQMRGKTPEQMRAHFNI 142
Query: 109 QNDF 112
+ND+
Sbjct: 143 KNDY 146
>TAIR|locus:2080532 [details] [associations]
symbol:SK13 "AT3G60010" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051510
"regulation of unidimensional cell growth" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
EMBL:AL138647 HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 IPI:IPI00542124 PIR:T47825 RefSeq:NP_567090.1
UniGene:At.65295 ProteinModelPortal:Q9M1X5 SMR:Q9M1X5 IntAct:Q9M1X5
STRING:Q9M1X5 PaxDb:Q9M1X5 PRIDE:Q9M1X5 EnsemblPlants:AT3G60010.1
GeneID:825171 KEGG:ath:AT3G60010 TAIR:At3g60010 InParanoid:Q9M1X5
OMA:AVQSQTI PhylomeDB:Q9M1X5 ProtClustDB:CLSN2917465
Genevestigator:Q9M1X5 Uniprot:Q9M1X5
Length = 154
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 70/118 (59%), Positives = 86/118 (72%)
Query: 1 AVMLESQTIKHMVEDGCADSVIPLLNVRGTILSMVIEYLKKHV--EAKTTE--DDLKNWD 56
AV ++SQTI HM+ED C + +P+ NV G ILS VIEY KKHV ++ T E D+LK WD
Sbjct: 20 AVAVQSQTIAHMIEDDCVANGVPIANVTGVILSKVIEYCKKHVVSDSPTEESKDELKKWD 79
Query: 57 VDFAK-LGQD-TLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQNDF 112
+F K L Q TLFD+++AANYL+IK LLDL CQTVADMI GK P+EIR I+NDF
Sbjct: 80 AEFMKALEQSSTLFDVMLAANYLNIKDLLDLGCQTVADMITGKKPDEIRALLGIENDF 137
>TAIR|locus:2050281 [details] [associations]
symbol:SK3 "AT2G25700" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 HSSP:P63208
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 EMBL:AC006053
EMBL:AY052700 EMBL:AY139806 IPI:IPI00526397 PIR:F84651
RefSeq:NP_565604.1 UniGene:At.26484 ProteinModelPortal:Q9SL93
SMR:Q9SL93 IntAct:Q9SL93 STRING:Q9SL93 EnsemblPlants:AT2G25700.1
GeneID:817111 KEGG:ath:AT2G25700 TAIR:At2g25700 InParanoid:Q9SL93
OMA:CCKTIAN ProtClustDB:CLSN2687877 Genevestigator:Q9SL93
Uniprot:Q9SL93
Length = 163
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 69/124 (55%), Positives = 88/124 (70%)
Query: 1 AVMLESQTIKHMVEDGCADSVIPLLNVRGTILSMVIEYLKKHVEAK-----------TTE 49
AV +ESQTIKHM+ED C D+ IPL NV G IL+ VIEY KKHVEA +TE
Sbjct: 23 AVAVESQTIKHMIEDDCVDNGIPLPNVTGAILAKVIEYCKKHVEAAAEAGGDKDFYGSTE 82
Query: 50 D-DLKNWDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHI 108
+ +LK WD DF K+ TLFDLL AANYL+I LLDL C+ VAD ++GK+P ++R+ F+I
Sbjct: 83 NHELKTWDNDFVKVDHPTLFDLLRAANYLNISGLLDLTCKAVADQMRGKTPAQMREHFNI 142
Query: 109 QNDF 112
+ND+
Sbjct: 143 KNDY 146
>TAIR|locus:2080542 [details] [associations]
symbol:SK5 "AT3G60020" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
EMBL:AL138647 HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 EMBL:DQ056631 IPI:IPI00544108 PIR:T47826
RefSeq:NP_567091.1 UniGene:At.62418 ProteinModelPortal:Q9M1X4
SMR:Q9M1X4 IntAct:Q9M1X4 STRING:Q9M1X4 PRIDE:Q9M1X4
EnsemblPlants:AT3G60020.1 GeneID:825172 KEGG:ath:AT3G60020
TAIR:At3g60020 InParanoid:Q9M1X4 OMA:EWDADFM
ProtClustDB:CLSN2917466 Genevestigator:Q9M1X4 Uniprot:Q9M1X4
Length = 153
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 66/116 (56%), Positives = 85/116 (73%)
Query: 2 VMLESQTIKHMVEDGCADSVIPLLNVRGTILSMVIEYLKKHVEAKTTEDDLKNWDVDFAK 61
V +S I HMVEDGCA VIPL NV IL +VI+Y +KHV++K E+DLK WD DF K
Sbjct: 21 VARKSIAINHMVEDGCATDVIPLRNVTSKILKIVIDYCEKHVKSKE-EEDLKEWDADFMK 79
Query: 62 LGQDT-LFDLLMAANYLDIKSLLDLLCQTV-----ADMIKGKSPEEIRQTFHIQND 111
+ T LFD++MAANYL+I+SLLDL C+TV AD++ GK+P+EIR F+I+ND
Sbjct: 80 TIETTILFDVMMAANYLNIQSLLDLTCKTVSDLLQADLLSGKTPDEIRAHFNIEND 135
>TAIR|locus:2093094 [details] [associations]
symbol:SK10 "AT3G21860" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051510
"regulation of unidimensional cell growth" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 EMBL:AB025634
GO:GO:0006511 GO:GO:0019005 EMBL:DQ056602 IPI:IPI00548110
RefSeq:NP_566695.1 UniGene:At.70381 HSSP:P63208
ProteinModelPortal:Q9LSX8 SMR:Q9LSX8 IntAct:Q9LSX8 STRING:Q9LSX8
EnsemblPlants:AT3G21860.1 GeneID:821740 KEGG:ath:AT3G21860
TAIR:At3g21860 eggNOG:COG5201 HOGENOM:HOG000172184
InParanoid:Q9LSX8 KO:K03094 OMA:IFDLIMA ProtClustDB:CLSN2688652
Genevestigator:Q9LSX8 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 Uniprot:Q9LSX8
Length = 152
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 64/111 (57%), Positives = 80/111 (72%)
Query: 5 ESQTIKHMVEDGCADSVIPLLNVRGTILSMVIEYLKKH-VEAKT--TEDDLKNWDVDFAK 61
+ QTI HM ED C D+ IPL V G IL MVIEY KH V+A +++DLK WD +F +
Sbjct: 25 QCQTIAHMSEDDCTDNGIPLPEVTGKILEMVIEYCNKHHVDAANPCSDEDLKKWDKEFME 84
Query: 62 LGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQNDF 112
Q T+FDL+MAANYL+IKSLLDL CQTVADMIK + E R+ F+I+ND+
Sbjct: 85 KYQSTIFDLIMAANYLNIKSLLDLACQTVADMIKDNTVEHTRKFFNIENDY 135
>TAIR|locus:2056956 [details] [associations]
symbol:SK14 "AT2G03170" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 HSSP:P63208
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 EMBL:AC005313
EMBL:DQ056526 IPI:IPI00517714 PIR:T02709 RefSeq:NP_565296.1
UniGene:At.52615 ProteinModelPortal:O81057 SMR:O81057 IntAct:O81057
STRING:O81057 PaxDb:O81057 PRIDE:O81057 EnsemblPlants:AT2G03170.1
GeneID:814846 KEGG:ath:AT2G03170 TAIR:At2g03170 InParanoid:O81057
OMA:KTWDEEF PhylomeDB:O81057 ProtClustDB:CLSN2687939
Genevestigator:O81057 Uniprot:O81057
Length = 149
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 62/113 (54%), Positives = 82/113 (72%)
Query: 1 AVMLESQTIKHMVEDGCADSVIPLLNVRGTILSMVIEYLKKHVEAKTTEDDLKNWDVDFA 60
AV + + ++HM+ED C + +PL NV G ILS+V+EY KKHV + + D+ K WD +F
Sbjct: 21 AVARKLKIVEHMIEDDCVVTEVPLQNVTGKILSIVVEYCKKHVVDEES-DEFKTWDEEFM 79
Query: 61 K-LGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQNDF 112
K Q T+F LL+AANYL+IK LLDL QTVAD IK K+PEEIR+ F+I+NDF
Sbjct: 80 KKFDQPTVFQLLLAANYLNIKGLLDLSAQTVADRIKDKTPEEIREIFNIENDF 132
>TAIR|locus:2093084 [details] [associations]
symbol:SK9 "AT3G21850" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051510
"regulation of unidimensional cell growth" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 GO:GO:0007346 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016567 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
EMBL:AB025634 GO:GO:0006511 HSSP:P63208 eggNOG:COG5201
HOGENOM:HOG000172184 KO:K03094 ProtClustDB:CLSN2688652
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 EMBL:DQ446683 EMBL:DQ653099 IPI:IPI00543724
RefSeq:NP_566694.1 UniGene:At.70382 ProteinModelPortal:Q9LSX9
SMR:Q9LSX9 IntAct:Q9LSX9 STRING:Q9LSX9 PaxDb:Q9LSX9 PRIDE:Q9LSX9
EnsemblPlants:AT3G21850.1 GeneID:821739 KEGG:ath:AT3G21850
TAIR:At3g21850 InParanoid:Q9LSX9 OMA:ARQCQII Genevestigator:Q9LSX9
Uniprot:Q9LSX9
Length = 153
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 61/106 (57%), Positives = 79/106 (74%)
Query: 9 IKHMVEDGCADSVIPLLNVRGTILSMVIEYLKKH-VEAKT--TEDDLKNWDVDFAKLGQD 65
I HM E+ C D+ IPL NV G IL+MVIEY KH V+A ++DDLK WD +F +
Sbjct: 30 IAHMSENDCTDNGIPLPNVTGKILAMVIEYCNKHHVDAANPCSDDDLKKWDKEFMEKDTS 89
Query: 66 TLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQND 111
T+FDL+ AANYL+IKSL DL CQTVA++IKG +PE+IR+ F+I+ND
Sbjct: 90 TIFDLIKAANYLNIKSLFDLACQTVAEIIKGNTPEQIREFFNIEND 135
>TAIR|locus:2056931 [details] [associations]
symbol:SK16 "AT2G03190" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 GO:GO:0019005
HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 EMBL:AC005313 EMBL:BT015070 EMBL:BT015726
IPI:IPI00519862 PIR:T02707 RefSeq:NP_565297.1 UniGene:At.50066
ProteinModelPortal:O81055 SMR:O81055 IntAct:O81055 STRING:O81055
PaxDb:O81055 PRIDE:O81055 EnsemblPlants:AT2G03190.1 GeneID:814848
KEGG:ath:AT2G03190 TAIR:At2g03190 InParanoid:O81055 OMA:CADKAIP
PhylomeDB:O81055 ProtClustDB:CLSN2917046 Genevestigator:O81055
Uniprot:O81055
Length = 170
Score = 173 (66.0 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
Identities = 30/65 (46%), Positives = 48/65 (73%)
Query: 49 EDDLKNWDVDFAK-LGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFH 107
+++L+ WD +F K +T+ L++A NYL+++ LL L CQTVAD +K SPEE+R+ F+
Sbjct: 86 KNELRTWDAEFMKEFDMETVMKLILAVNYLNVQDLLGLTCQTVADHMKDMSPEEVRELFN 145
Query: 108 IQNDF 112
I+ND+
Sbjct: 146 IENDY 150
Score = 130 (50.8 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
Identities = 26/51 (50%), Positives = 33/51 (64%)
Query: 1 AVMLESQTIKHMVEDGCADSVIPLLNVRGTILSMVIEYLKKHVEAKTTEDD 51
AV + + I HM++D CAD IPL NV G IL++VIEY KKHV + D
Sbjct: 21 AVARKLKVIAHMIDDDCADKAIPLENVTGNILALVIEYCKKHVLDDVDDSD 71
>DICTYBASE|DDB_G0269230 [details] [associations]
symbol:fpaA "ubiquitin ligase subunit SKP1"
species:44689 "Dictyostelium discoideum" [GO:0005515 "protein
binding" evidence=IPI] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0005938 "cell cortex" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016567 "protein ubiquitination"
evidence=TAS] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 dictyBase:DDB_G0269230
GO:GO:0005938 GO:GO:0005634 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0030587 GO:GO:0006511
GO:GO:0019005 eggNOG:COG5201 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 EMBL:U18063
EMBL:U73685 PIR:A55969 RefSeq:XP_646453.1 ProteinModelPortal:P52285
SMR:P52285 IntAct:P52285 GlycoSuiteDB:P52285 PRIDE:P52285
EnsemblProtists:DDB0191107 GeneID:8617413 KEGG:ddi:DDB_G0269230
OMA:KNWDADF ProtClustDB:CLSZ2729221 Uniprot:P52285
Length = 162
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 61/118 (51%), Positives = 84/118 (71%)
Query: 6 SQTIKHMVED-GCADSVIPLLNVRGTILSMVIEYLKKHVEAKTTE----------DDLKN 54
S TIK+M+ED G +DS IPL NV TIL V++Y + H + + + DD+
Sbjct: 24 SVTIKNMIEDIGESDSPIPLPNVTSTILEKVLDYCRHHHQHPSPQGDDKKDEKRLDDIPP 83
Query: 55 WDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQNDF 112
+D DF K+ Q TLF+L++AANYLDIK LLD+ C+TVA+MI+GK+PEEIR+ F+I+NDF
Sbjct: 84 YDRDFCKVDQPTLFELILAANYLDIKPLLDVTCKTVANMIRGKTPEEIRKIFNIKNDF 141
>DICTYBASE|DDB_G0273615 [details] [associations]
symbol:fpaB-2 "ubiquitin ligase subunit SKP1"
species:44689 "Dictyostelium discoideum" [GO:0030587 "sorocarp
development" evidence=IMP] [GO:0005938 "cell cortex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0016567 "protein
ubiquitination" evidence=TAS] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 dictyBase:DDB_G0273615
dictyBase:DDB_G0273251 GO:GO:0005938 GO:GO:0005634
GenomeReviews:CM000151_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0030587 EMBL:AAFI02000011
EMBL:AAFI02000009 GO:GO:0006511 GO:GO:0019005 HSSP:P63208
eggNOG:COG5201 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 PIR:A55969
ProtClustDB:CLSZ2729221 EMBL:U73686 RefSeq:XP_644424.1
RefSeq:XP_644826.1 ProteinModelPortal:Q557E4 SMR:Q557E4
PRIDE:Q557E4 EnsemblProtists:DDB0185043 EnsemblProtists:DDB0266780
GeneID:8618928 GeneID:8619049 KEGG:ddi:DDB_G0273251
KEGG:ddi:DDB_G0273615 OMA:VIQWCTY Uniprot:Q557E4
Length = 162
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 60/118 (50%), Positives = 84/118 (71%)
Query: 6 SQTIKHMVED-GCADSVIPLLNVRGTILSMVIEYLKKHVEAKTTE----------DDLKN 54
S TIK+M+ED G +D+ IPL NV TIL V++Y + H + + + DD+
Sbjct: 24 SVTIKNMIEDIGESDAPIPLPNVTSTILEKVLDYCRHHHQHPSPQGDDKKDEKRLDDIPP 83
Query: 55 WDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQNDF 112
+D DF K+ Q TLF+L++AANYLDIK LLD+ C+TVA+MI+GK+PEEIR+ F+I+NDF
Sbjct: 84 YDRDFCKVDQPTLFELILAANYLDIKPLLDVTCKTVANMIRGKTPEEIRKIFNIKNDF 141
>DICTYBASE|DDB_G0273251 [details] [associations]
symbol:fpaB-1 "ubiquitin ligase subunit SKP1"
species:44689 "Dictyostelium discoideum" [GO:0030587 "sorocarp
development" evidence=IMP] [GO:0005938 "cell cortex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0016567 "protein
ubiquitination" evidence=TAS] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 dictyBase:DDB_G0273615
dictyBase:DDB_G0273251 GO:GO:0005938 GO:GO:0005634
GenomeReviews:CM000151_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0030587 EMBL:AAFI02000011
EMBL:AAFI02000009 GO:GO:0006511 GO:GO:0019005 HSSP:P63208
eggNOG:COG5201 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 PIR:A55969
ProtClustDB:CLSZ2729221 EMBL:U73686 RefSeq:XP_644424.1
RefSeq:XP_644826.1 ProteinModelPortal:Q557E4 SMR:Q557E4
PRIDE:Q557E4 EnsemblProtists:DDB0185043 EnsemblProtists:DDB0266780
GeneID:8618928 GeneID:8619049 KEGG:ddi:DDB_G0273251
KEGG:ddi:DDB_G0273615 OMA:VIQWCTY Uniprot:Q557E4
Length = 162
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 60/118 (50%), Positives = 84/118 (71%)
Query: 6 SQTIKHMVED-GCADSVIPLLNVRGTILSMVIEYLKKHVEAKTTE----------DDLKN 54
S TIK+M+ED G +D+ IPL NV TIL V++Y + H + + + DD+
Sbjct: 24 SVTIKNMIEDIGESDAPIPLPNVTSTILEKVLDYCRHHHQHPSPQGDDKKDEKRLDDIPP 83
Query: 55 WDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQNDF 112
+D DF K+ Q TLF+L++AANYLDIK LLD+ C+TVA+MI+GK+PEEIR+ F+I+NDF
Sbjct: 84 YDRDFCKVDQPTLFELILAANYLDIKPLLDVTCKTVANMIRGKTPEEIRKIFNIKNDF 141
>TAIR|locus:2056966 [details] [associations]
symbol:SK19 "AT2G03160" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 HSSP:P63208
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 EMBL:AC005313
EMBL:DQ056525 IPI:IPI00531321 PIR:T02710 RefSeq:NP_565295.1
UniGene:At.52614 ProteinModelPortal:O81058 SMR:O81058 IntAct:O81058
STRING:O81058 PaxDb:O81058 PRIDE:O81058 EnsemblPlants:AT2G03160.1
GeneID:814845 KEGG:ath:AT2G03160 TAIR:At2g03160 InParanoid:O81058
OMA:VVETHES PhylomeDB:O81058 ProtClustDB:CLSN2917045
Genevestigator:O81058 Uniprot:O81058
Length = 200
Score = 176 (67.0 bits), Expect = 2.4e-24, Sum P(2) = 2.4e-24
Identities = 32/70 (45%), Positives = 49/70 (70%)
Query: 44 EAKTTEDDLKNWDVDFAK-LGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEI 102
EA+ ++ L WD F K T+FD+++AANYL+++ L DL +T+AD IK +PEE+
Sbjct: 104 EAEDKKEKLNEWDAKFMKDFDIKTIFDIILAANYLNVQGLFDLCSKTIADYIKDMTPEEV 163
Query: 103 RQTFHIQNDF 112
R+ F+I+NDF
Sbjct: 164 RELFNIENDF 173
Score = 117 (46.2 bits), Expect = 2.4e-24, Sum P(2) = 2.4e-24
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 7 QTIKHMVEDGCADSVIPLLNVRGTILSMVIEYLKKHVEAKTTEDDL 52
Q + H++ED CA + IP+ NV G IL+ VIEY KKHVE +DD+
Sbjct: 27 QIVGHIIEDDCATNKIPIPNVTGEILAKVIEYCKKHVE---DDDDV 69
>FB|FBgn0025637 [details] [associations]
symbol:skpA "skpA" species:7227 "Drosophila melanogaster"
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0051298 "centrosome duplication" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IMP] [GO:0042023
"DNA endoreduplication" evidence=IMP] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IDA;NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0005819 "spindle"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0010824
"regulation of centrosome duplication" evidence=IMP] [GO:0007067
"mitosis" evidence=IMP] [GO:0031647 "regulation of protein
stability" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007095 "mitotic G2 DNA damage checkpoint"
evidence=IGI] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 GO:GO:0005813 GO:GO:0005875
GO:GO:0007095 GO:GO:0007067 GO:GO:0051298 GO:GO:0022008
GO:GO:0005819 GO:GO:0045931 EMBL:AE014298 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0031647 GO:GO:0006511
GO:GO:0019005 GO:GO:0030261 eggNOG:COG5201 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GO:GO:0042023 EMBL:AL031581 GO:GO:0010824
OMA:VIQWCTY GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:AF220066
EMBL:AY069297 EMBL:BT099582 EMBL:BT099610 PIR:T13390
RefSeq:NP_001033818.1 RefSeq:NP_477390.1 RefSeq:NP_726690.1
RefSeq:NP_726691.1 RefSeq:NP_726692.1 RefSeq:NP_726693.1
RefSeq:NP_726694.1 RefSeq:NP_726695.1 UniGene:Dm.7039 SMR:O77430
DIP:DIP-18869N IntAct:O77430 MINT:MINT-318247 STRING:O77430
EnsemblMetazoa:FBtr0070123 EnsemblMetazoa:FBtr0070124
EnsemblMetazoa:FBtr0070125 EnsemblMetazoa:FBtr0070126
EnsemblMetazoa:FBtr0070127 EnsemblMetazoa:FBtr0070128
EnsemblMetazoa:FBtr0070129 EnsemblMetazoa:FBtr0100530 GeneID:31016
KEGG:dme:Dmel_CG16983 UCSC:CG16983-RA CTD:31016 FlyBase:FBgn0025637
InParanoid:O77430 OrthoDB:EOG4BG7CC GenomeRNAi:31016 NextBio:771500
Uniprot:O77430
Length = 162
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 62/121 (51%), Positives = 83/121 (68%)
Query: 6 SQTIKHMVED-GCAD---SVIPLLNVRGTILSMVIEYLKKHVE-AKTTEDD--------- 51
S TIK M+ED G D +++PL NV TIL V+ + H + + TEDD
Sbjct: 24 SGTIKTMLEDCGMEDDENAIVPLPNVNSTILRKVLTWAHYHKDDPQPTEDDESKEKRTDD 83
Query: 52 LKNWDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQND 111
+ +WD DF K+ Q TLF+L++AANYLDIK LL+L C+TVA+MIKGK+PEEIR+TF+I+ D
Sbjct: 84 IISWDADFLKVDQGTLFELILAANYLDIKGLLELTCKTVANMIKGKTPEEIRKTFNIKKD 143
Query: 112 F 112
F
Sbjct: 144 F 144
>WB|WBGene00004807 [details] [associations]
symbol:skr-1 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0008406 "gonad development"
evidence=IMP] [GO:0016477 "cell migration" evidence=IMP]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 GO:GO:0008340 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0016477 GO:GO:0008406 GO:GO:0002119 GO:GO:0016246
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0040035
GO:GO:0006511 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 OMA:VIQWCTY
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:Z81072 EMBL:Z81084
PIR:T21573 RefSeq:NP_492513.1 ProteinModelPortal:G5ECU1 SMR:G5ECU1
IntAct:G5ECU1 EnsemblMetazoa:F46A9.5.1 EnsemblMetazoa:F46A9.5.2
EnsemblMetazoa:F46A9.5.3 GeneID:172775 KEGG:cel:CELE_F46A9.5
CTD:172775 WormBase:F46A9.5 NextBio:876957 Uniprot:G5ECU1
Length = 176
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 57/109 (52%), Positives = 76/109 (69%)
Query: 14 EDGCADSVIPLLNVRGTILSMVIEYLKKH-VEAKTTED---------DLKNWDVDFAKLG 63
E+G IP+ NV +IL VI + H + +TED D+ +WDV+F K+
Sbjct: 51 EEGTNAEPIPVQNVTASILKKVISWCNHHHSDPISTEDSDNREKRTDDIGSWDVEFLKVD 110
Query: 64 QDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQNDF 112
Q TLF+L++AANYLDIK LLD+ C+TVA+MIKGKSPEEIR+TF+I+NDF
Sbjct: 111 QGTLFELILAANYLDIKGLLDVTCKTVANMIKGKSPEEIRRTFNIKNDF 159
>UNIPROTKB|G5ECU1 [details] [associations]
symbol:skr-1 "Protein SKR-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 GO:GO:0008340 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0016477 GO:GO:0008406 GO:GO:0002119 GO:GO:0016246
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0040035
GO:GO:0006511 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 OMA:VIQWCTY
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:Z81072 EMBL:Z81084
PIR:T21573 RefSeq:NP_492513.1 ProteinModelPortal:G5ECU1 SMR:G5ECU1
IntAct:G5ECU1 EnsemblMetazoa:F46A9.5.1 EnsemblMetazoa:F46A9.5.2
EnsemblMetazoa:F46A9.5.3 GeneID:172775 KEGG:cel:CELE_F46A9.5
CTD:172775 WormBase:F46A9.5 NextBio:876957 Uniprot:G5ECU1
Length = 176
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 57/109 (52%), Positives = 76/109 (69%)
Query: 14 EDGCADSVIPLLNVRGTILSMVIEYLKKH-VEAKTTED---------DLKNWDVDFAKLG 63
E+G IP+ NV +IL VI + H + +TED D+ +WDV+F K+
Sbjct: 51 EEGTNAEPIPVQNVTASILKKVISWCNHHHSDPISTEDSDNREKRTDDIGSWDVEFLKVD 110
Query: 64 QDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQNDF 112
Q TLF+L++AANYLDIK LLD+ C+TVA+MIKGKSPEEIR+TF+I+NDF
Sbjct: 111 QGTLFELILAANYLDIKGLLDVTCKTVANMIKGKSPEEIRRTFNIKNDF 159
>TAIR|locus:2093064 [details] [associations]
symbol:SK8 "AT3G21830" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 EMBL:AB025634
GO:GO:0006511 GO:GO:0019005 HSSP:P63208 eggNOG:COG5201
HOGENOM:HOG000172184 KO:K03094 ProtClustDB:CLSN2688652
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 EMBL:DQ056601 IPI:IPI00519509 RefSeq:NP_566692.1
UniGene:At.62404 ProteinModelPortal:Q9LSY1 SMR:Q9LSY1 IntAct:Q9LSY1
EnsemblPlants:AT3G21830.1 GeneID:821737 KEGG:ath:AT3G21830
TAIR:At3g21830 InParanoid:Q9LSY1 OMA:HNEALNE Genevestigator:Q9LSY1
Uniprot:Q9LSY1
Length = 152
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 55/110 (50%), Positives = 77/110 (70%)
Query: 5 ESQTIKHMVEDGCADSVIPLLNVRGTILSMVIEYLKKH-VEAKT--TEDDLKNWDVDFAK 61
+ QTI HM+E C D+VI +L + IL MVIEY KH V+A ++DDL+ WD +F +
Sbjct: 25 QCQTIAHMIEAECTDNVILVLKMTSEILEMVIEYCNKHHVDAANPCSDDDLEKWDKEFME 84
Query: 62 LGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQND 111
+ T+F L AAN+L+ KSLL L QTVADMIKG +P+++R+ F+I+ND
Sbjct: 85 KDKSTIFALTNAANFLNNKSLLHLAGQTVADMIKGNTPKQMREFFNIEND 134
>UNIPROTKB|Q5ZKF5 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9031 "Gallus gallus" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0031519 "PcG protein complex"
evidence=IEA] [GO:0035518 "histone H2A monoubiquitination"
evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=ISS] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
UniPathway:UPA00143 GO:GO:0005829 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 GO:GO:0019005
GO:GO:0004842 HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GO:GO:0035518 GO:GO:0031519 OMA:VIQWCTY CTD:6500
GeneTree:ENSGT00390000012652 HOVERGEN:HBG057008 OrthoDB:EOG498V26
EMBL:AJ720129 IPI:IPI00591045 RefSeq:NP_001006153.1
UniGene:Gga.1718 ProteinModelPortal:Q5ZKF5 SMR:Q5ZKF5 STRING:Q5ZKF5
PRIDE:Q5ZKF5 Ensembl:ENSGALT00000010461 GeneID:416319
KEGG:gga:416319 InParanoid:Q5ZKF5 NextBio:20819793 Uniprot:Q5ZKF5
Length = 163
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 62/124 (50%), Positives = 81/124 (65%)
Query: 5 ESQTIKHMVED-GCADS----VIPLLNVRGTILSMVIEYLKKHVE-----------AKTT 48
+S TIK M+ED G D +PL NV IL VI++ H + K T
Sbjct: 23 QSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 82
Query: 49 EDDLKNWDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHI 108
DD+ WD +F K+ Q TLF+L++AANYLDIK LLD+ C+TVA+MIKGK+PEEIR+TF+I
Sbjct: 83 -DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNI 141
Query: 109 QNDF 112
+NDF
Sbjct: 142 KNDF 145
>UNIPROTKB|Q3ZCF3 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9913 "Bos taurus" [GO:0005829 "cytosol" evidence=ISS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA] [GO:0031519 "PcG protein complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
UniPathway:UPA00143 GO:GO:0005829 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0019005 GO:GO:0004842
HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GO:GO:0035518 GO:GO:0031519 GO:GO:0031146
OMA:VIQWCTY EMBL:BT029901 EMBL:BC102435 IPI:IPI00699118
RefSeq:NP_001029953.1 UniGene:Bt.87240 ProteinModelPortal:Q3ZCF3
SMR:Q3ZCF3 STRING:Q3ZCF3 PRIDE:Q3ZCF3 Ensembl:ENSBTAT00000035306
GeneID:615427 KEGG:bta:615427 CTD:6500 GeneTree:ENSGT00390000012652
HOVERGEN:HBG057008 InParanoid:Q3ZCF3 OrthoDB:EOG498V26
NextBio:20899611 Uniprot:Q3ZCF3
Length = 163
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 62/124 (50%), Positives = 81/124 (65%)
Query: 5 ESQTIKHMVED-GCADS----VIPLLNVRGTILSMVIEYLKKHVE-----------AKTT 48
+S TIK M+ED G D +PL NV IL VI++ H + K T
Sbjct: 23 QSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 82
Query: 49 EDDLKNWDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHI 108
DD+ WD +F K+ Q TLF+L++AANYLDIK LLD+ C+TVA+MIKGK+PEEIR+TF+I
Sbjct: 83 -DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNI 141
Query: 109 QNDF 112
+NDF
Sbjct: 142 KNDF 145
>UNIPROTKB|E2RRW0 [details] [associations]
symbol:SKP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035518 "histone H2A monoubiquitination"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=IEA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
GO:GO:0005829 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 GO:GO:0019005 GO:GO:0004842 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 GO:GO:0035518
GO:GO:0031519 GeneTree:ENSGT00390000012652 OMA:IMNILEV
EMBL:AAEX03007782 Ensembl:ENSCAFT00000001535 Uniprot:E2RRW0
Length = 163
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 62/124 (50%), Positives = 81/124 (65%)
Query: 5 ESQTIKHMVED-GCADS----VIPLLNVRGTILSMVIEYLKKHVE-----------AKTT 48
+S TIK M+ED G D +PL NV IL VI++ H + K T
Sbjct: 23 QSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 82
Query: 49 EDDLKNWDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHI 108
DD+ WD +F K+ Q TLF+L++AANYLDIK LLD+ C+TVA+MIKGK+PEEIR+TF+I
Sbjct: 83 -DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNI 141
Query: 109 QNDF 112
+NDF
Sbjct: 142 KNDF 145
>UNIPROTKB|F8W8N3 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 HGNC:HGNC:10899 ChiTaRS:SKP1
EMBL:AC104109 EMBL:AC011336 IPI:IPI00985006
ProteinModelPortal:F8W8N3 SMR:F8W8N3 Ensembl:ENST00000328392
ArrayExpress:F8W8N3 Bgee:F8W8N3 Uniprot:F8W8N3
Length = 158
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 62/124 (50%), Positives = 81/124 (65%)
Query: 5 ESQTIKHMVED-GCADS----VIPLLNVRGTILSMVIEYLKKHVE-----------AKTT 48
+S TIK M+ED G D +PL NV IL VI++ H + K T
Sbjct: 23 QSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 82
Query: 49 EDDLKNWDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHI 108
DD+ WD +F K+ Q TLF+L++AANYLDIK LLD+ C+TVA+MIKGK+PEEIR+TF+I
Sbjct: 83 -DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNI 141
Query: 109 QNDF 112
+NDF
Sbjct: 142 KNDF 145
>UNIPROTKB|P63208 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9606 "Homo sapiens" [GO:0005515 "protein binding"
evidence=IPI] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0035518
"histone H2A monoubiquitination" evidence=IDA] [GO:0031519 "PcG
protein complex" evidence=IDA] [GO:0000080 "G1 phase of mitotic
cell cycle" evidence=TAS] [GO:0000082 "G1/S transition of mitotic
cell cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell
cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0007219 "Notch signaling pathway" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0051437 "positive regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051439
"regulation of ubiquitin-protein ligase activity involved in
mitotic cell cycle" evidence=TAS] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0016032 EMBL:CH471062
GO:GO:0000082 GO:GO:0007219 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0019005 GO:GO:0004842 GO:GO:0000084
GO:GO:0031145 GO:GO:0051437 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GO:GO:0000080 GO:GO:0035518 Reactome:REACT_24941
GO:GO:0031146 PDB:2AST PDBsum:2AST PDB:2ASS PDBsum:2ASS PDB:1P22
PDBsum:1P22 PDB:1LDK PDBsum:1LDK PDB:2E31 PDB:2E32 PDBsum:2E31
PDBsum:2E32 PDB:3L2O PDBsum:3L2O PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR OMA:VIQWCTY CTD:6500
HOVERGEN:HBG057008 OrthoDB:EOG498V26 EMBL:U33760 EMBL:Z47087
EMBL:BC009839 EMBL:BC020798 EMBL:BC025673 EMBL:BC065730 EMBL:U37558
IPI:IPI00172421 IPI:IPI00301364 PIR:I39170 RefSeq:NP_008861.2
RefSeq:NP_733779.1 UniGene:Hs.171626 PDB:1FQV PDB:1FS1 PDB:1FS2
PDBsum:1FQV PDBsum:1FS1 PDBsum:1FS2 ProteinModelPortal:P63208
SMR:P63208 DIP:DIP-31606N IntAct:P63208 MINT:MINT-5001195
STRING:P63208 PhosphoSite:P63208 DMDM:52783797 SWISS-2DPAGE:P63208
PaxDb:P63208 PeptideAtlas:P63208 PRIDE:P63208 DNASU:6500
Ensembl:ENST00000353411 Ensembl:ENST00000517625
Ensembl:ENST00000522552 Ensembl:ENST00000522855 GeneID:6500
KEGG:hsa:6500 UCSC:uc003kzc.4 UCSC:uc003kzd.4 GeneCards:GC05M133521
H-InvDB:HIX0129723 HGNC:HGNC:10899 HPA:CAB012982 MIM:601434
neXtProt:NX_P63208 PharmGKB:PA162403424 InParanoid:P63208
PhylomeDB:P63208 ChiTaRS:SKP1 EvolutionaryTrace:P63208
GenomeRNAi:6500 NextBio:25267 ArrayExpress:P63208 Bgee:P63208
CleanEx:HS_SKP1 Genevestigator:P63208 GermOnline:ENSG00000113558
Uniprot:P63208
Length = 163
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 62/124 (50%), Positives = 81/124 (65%)
Query: 5 ESQTIKHMVED-GCADS----VIPLLNVRGTILSMVIEYLKKHVE-----------AKTT 48
+S TIK M+ED G D +PL NV IL VI++ H + K T
Sbjct: 23 QSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 82
Query: 49 EDDLKNWDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHI 108
DD+ WD +F K+ Q TLF+L++AANYLDIK LLD+ C+TVA+MIKGK+PEEIR+TF+I
Sbjct: 83 -DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNI 141
Query: 109 QNDF 112
+NDF
Sbjct: 142 KNDF 145
>UNIPROTKB|P63209 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:10141 "Cavia porcellus" [GO:0005829 "cytosol" evidence=ISS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0019005
eggNOG:COG5201 HOGENOM:HOG000172184 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 GO:GO:0031146
CTD:6500 HOVERGEN:HBG057008 OrthoDB:EOG498V26 EMBL:Z35481
PIR:A57630 RefSeq:NP_001166486.1 ProteinModelPortal:P63209
SMR:P63209 MINT:MINT-108497 STRING:P63209 PRIDE:P63209
GeneID:100135616 InParanoid:P63209 Uniprot:P63209
Length = 163
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 62/124 (50%), Positives = 81/124 (65%)
Query: 5 ESQTIKHMVED-GCADS----VIPLLNVRGTILSMVIEYLKKHVE-----------AKTT 48
+S TIK M+ED G D +PL NV IL VI++ H + K T
Sbjct: 23 QSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 82
Query: 49 EDDLKNWDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHI 108
DD+ WD +F K+ Q TLF+L++AANYLDIK LLD+ C+TVA+MIKGK+PEEIR+TF+I
Sbjct: 83 -DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNI 141
Query: 109 QNDF 112
+NDF
Sbjct: 142 KNDF 145
>UNIPROTKB|Q4R5B9 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9541 "Macaca fascicularis" [GO:0005829 "cytosol"
evidence=ISS] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=ISS] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005829 GO:GO:0016567 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0019005 HSSP:P63208 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 GO:GO:0031146
HOVERGEN:HBG057008 EMBL:AB169346 EMBL:AB169625
ProteinModelPortal:Q4R5B9 SMR:Q4R5B9 PRIDE:Q4R5B9 Uniprot:Q4R5B9
Length = 163
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 62/124 (50%), Positives = 81/124 (65%)
Query: 5 ESQTIKHMVED-GCADS----VIPLLNVRGTILSMVIEYLKKHVE-----------AKTT 48
+S TIK M+ED G D +PL NV IL VI++ H + K T
Sbjct: 23 QSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 82
Query: 49 EDDLKNWDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHI 108
DD+ WD +F K+ Q TLF+L++AANYLDIK LLD+ C+TVA+MIKGK+PEEIR+TF+I
Sbjct: 83 -DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNI 141
Query: 109 QNDF 112
+NDF
Sbjct: 142 KNDF 145
>UNIPROTKB|Q5R512 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9601 "Pongo abelii" [GO:0005829 "cytosol" evidence=ISS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0019005
HSSP:P63208 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 GO:GO:0031146 OMA:VIQWCTY
CTD:6500 GeneTree:ENSGT00390000012652 HOVERGEN:HBG057008
EMBL:CR860371 EMBL:CR861073 RefSeq:NP_001127637.1 UniGene:Pab.18558
ProteinModelPortal:Q5R512 SMR:Q5R512 PRIDE:Q5R512
Ensembl:ENSPPYT00000018360 GeneID:100174716 KEGG:pon:100174716
InParanoid:Q5R512 Uniprot:Q5R512
Length = 163
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 62/124 (50%), Positives = 81/124 (65%)
Query: 5 ESQTIKHMVED-GCADS----VIPLLNVRGTILSMVIEYLKKHVE-----------AKTT 48
+S TIK M+ED G D +PL NV IL VI++ H + K T
Sbjct: 23 QSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 82
Query: 49 EDDLKNWDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHI 108
DD+ WD +F K+ Q TLF+L++AANYLDIK LLD+ C+TVA+MIKGK+PEEIR+TF+I
Sbjct: 83 -DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNI 141
Query: 109 QNDF 112
+NDF
Sbjct: 142 KNDF 145
>UNIPROTKB|Q71U00 [details] [associations]
symbol:skp1 "S-phase kinase-associated protein 1"
species:8355 "Xenopus laevis" [GO:0005515 "protein binding"
evidence=IPI] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=ISS] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
UniPathway:UPA00143 GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 GO:GO:0019005
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 CTD:6500 HOVERGEN:HBG057008 EMBL:AF176352
EMBL:AF169342 EMBL:BC054184 RefSeq:NP_001080844.1 UniGene:Xl.57174
ProteinModelPortal:Q71U00 SMR:Q71U00 IntAct:Q71U00 PRIDE:Q71U00
GeneID:380538 KEGG:xla:380538 Xenbase:XB-GENE-919643 Uniprot:Q71U00
Length = 163
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 62/124 (50%), Positives = 81/124 (65%)
Query: 5 ESQTIKHMVED-GCADS----VIPLLNVRGTILSMVIEYLKKHVE-----------AKTT 48
+S TIK M+ED G D +PL NV IL VI++ H + K T
Sbjct: 23 QSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 82
Query: 49 EDDLKNWDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHI 108
DD+ WD +F K+ Q TLF+L++AANYLDIK LLD+ C+TVA+MIKGK+PEEIR+TF+I
Sbjct: 83 -DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNI 141
Query: 109 QNDF 112
+NDF
Sbjct: 142 KNDF 145
>MGI|MGI:103575 [details] [associations]
symbol:Skp1a "S-phase kinase-associated protein 1A"
species:10090 "Mus musculus" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISO;IC] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=ISO;IC] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO;IDA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO;IDA]
[GO:0035518 "histone H2A monoubiquitination" evidence=ISO]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
MGI:MGI:103575 GO:GO:0005829 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0019005 GO:GO:0004842 eggNOG:COG5201
HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 GO:GO:0035518 GO:GO:0031519
GO:GO:0031146 OMA:VIQWCTY GeneTree:ENSGT00390000012652
HOVERGEN:HBG057008 OrthoDB:EOG498V26 ChiTaRS:SKP1 EMBL:AF083214
EMBL:AK002983 EMBL:AK010628 EMBL:AK012498 EMBL:AK014245
EMBL:AK027909 EMBL:AK078330 EMBL:AK088339 EMBL:BC002115
IPI:IPI00331163 RefSeq:NP_035673.3 UniGene:Mm.42944
ProteinModelPortal:Q9WTX5 SMR:Q9WTX5 IntAct:Q9WTX5 STRING:Q9WTX5
PhosphoSite:Q9WTX5 REPRODUCTION-2DPAGE:Q9WTX5 PaxDb:Q9WTX5
PRIDE:Q9WTX5 Ensembl:ENSMUST00000037324 Ensembl:ENSMUST00000109072
GeneID:21402 KEGG:mmu:21402 CTD:21402 InParanoid:Q9WTX5
NextBio:300668 Bgee:Q9WTX5 CleanEx:MM_SKP1A Genevestigator:Q9WTX5
GermOnline:ENSMUSG00000036309 Uniprot:Q9WTX5
Length = 163
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 62/124 (50%), Positives = 81/124 (65%)
Query: 5 ESQTIKHMVED-GCADS----VIPLLNVRGTILSMVIEYLKKHVE-----------AKTT 48
+S TIK M+ED G D +PL NV IL VI++ H + K T
Sbjct: 23 QSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 82
Query: 49 EDDLKNWDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHI 108
DD+ WD +F K+ Q TLF+L++AANYLDIK LLD+ C+TVA+MIKGK+PEEIR+TF+I
Sbjct: 83 -DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNI 141
Query: 109 QNDF 112
+NDF
Sbjct: 142 KNDF 145
>RGD|1359648 [details] [associations]
symbol:Skp1 "S-phase kinase-associated protein 1" species:10116
"Rattus norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=ISO;ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;ISS]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;ISS] [GO:0031519 "PcG protein
complex" evidence=IEA;ISO] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA;ISO] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 RGD:1359648 GO:GO:0005829
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0019005
GO:GO:0004842 eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GO:GO:0035518 GO:GO:0031519 GO:GO:0031146
OMA:VIQWCTY CTD:6500 GeneTree:ENSGT00390000012652
HOVERGEN:HBG057008 OrthoDB:EOG498V26 EMBL:BC058152 IPI:IPI00369350
RefSeq:NP_001007609.1 UniGene:Rn.3477 ProteinModelPortal:Q6PEC4
SMR:Q6PEC4 DIP:DIP-29863N IntAct:Q6PEC4 STRING:Q6PEC4
PhosphoSite:Q6PEC4 PRIDE:Q6PEC4 Ensembl:ENSRNOT00000007676
GeneID:287280 KEGG:rno:287280 UCSC:RGD:1359648 InParanoid:Q6PEC4
NextBio:625795 ArrayExpress:Q6PEC4 Genevestigator:Q6PEC4
GermOnline:ENSRNOG00000005828 Uniprot:Q6PEC4
Length = 163
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 62/124 (50%), Positives = 81/124 (65%)
Query: 5 ESQTIKHMVED-GCADS----VIPLLNVRGTILSMVIEYLKKHVE-----------AKTT 48
+S TIK M+ED G D +PL NV IL VI++ H + K T
Sbjct: 23 QSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 82
Query: 49 EDDLKNWDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHI 108
DD+ WD +F K+ Q TLF+L++AANYLDIK LLD+ C+TVA+MIKGK+PEEIR+TF+I
Sbjct: 83 -DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNI 141
Query: 109 QNDF 112
+NDF
Sbjct: 142 KNDF 145
>ZFIN|ZDB-GENE-040426-1707 [details] [associations]
symbol:skp1 "S-phase kinase-associated protein 1"
species:7955 "Danio rerio" [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0016310 "phosphorylation"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 ZFIN:ZDB-GENE-040426-1707
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0016301
GO:GO:0006511 eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 OMA:KNWDADF CTD:6500 GeneTree:ENSGT00390000012652
HOVERGEN:HBG057008 OrthoDB:EOG498V26 EMBL:FP017197 EMBL:BC059536
EMBL:AY648843 IPI:IPI00501108 RefSeq:NP_957037.1 UniGene:Dr.83245
SMR:Q6PBY8 STRING:Q6PBY8 Ensembl:ENSDART00000008454 GeneID:393716
KEGG:dre:393716 InParanoid:Q6PBY8 NextBio:20814718 Uniprot:Q6PBY8
Length = 163
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 62/124 (50%), Positives = 81/124 (65%)
Query: 5 ESQTIKHMVED-GCADS----VIPLLNVRGTILSMVIEYLKKHVE-----------AKTT 48
+S TIK M+ED G D +PL NV IL VI++ H + K T
Sbjct: 23 QSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 82
Query: 49 EDDLKNWDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHI 108
DD+ WD +F K+ Q TLF+L++AANYLDIK LLD+ C+TVA+MIKGK+PEEIR+TF+I
Sbjct: 83 -DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNI 141
Query: 109 QNDF 112
+NDF
Sbjct: 142 KNDF 145
>FB|FBgn0026176 [details] [associations]
symbol:skpB "skpB" species:7227 "Drosophila melanogaster"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
EMBL:AE013599 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 GeneTree:ENSGT00390000012652
HSSP:P34991 EMBL:AF220067 EMBL:BT023253 RefSeq:NP_610729.1
UniGene:Dm.7613 SMR:Q7KJ69 DIP:DIP-18873N IntAct:Q7KJ69
STRING:Q7KJ69 EnsemblMetazoa:FBtr0088020 GeneID:36298
KEGG:dme:Dmel_CG8881 UCSC:CG8881-RA CTD:36298 FlyBase:FBgn0026176
InParanoid:Q7KJ69 OMA:MPIIRLE OrthoDB:EOG4ZCRMP GenomeRNAi:36298
NextBio:797800 Uniprot:Q7KJ69
Length = 161
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 60/120 (50%), Positives = 79/120 (65%)
Query: 6 SQTIKHMVED-G--CADSVIPLLNVRGTILSMVIEYLKKH---------VEAKTTE-DDL 52
S+TI+ +ED G +SV+PL NV IL V+ + H VE K DD+
Sbjct: 24 SETIRIAIEDLGDESDNSVLPLPNVNSLILKKVLHWATYHKDDPVVTEEVENKEKRTDDI 83
Query: 53 KNWDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQNDF 112
+WD DF K+ Q TLF+L++AANYL+I+ LLD+ C+TVA+MIKGKSP+ IR TF IQNDF
Sbjct: 84 SSWDADFLKVDQGTLFELILAANYLNIQGLLDVTCKTVANMIKGKSPQAIRDTFAIQNDF 143
>ASPGD|ASPL0000044827 [details] [associations]
symbol:sconC species:162425 "Emericella nidulans"
[GO:0006790 "sulfur compound metabolic process" evidence=IEP]
[GO:0045116 "protein neddylation" evidence=IEA] [GO:0007095
"mitotic G2 DNA damage checkpoint" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007035 "vacuolar acidification" evidence=IEA] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045841 "negative regulation of mitotic metaphase/anaphase
transition" evidence=IEA] [GO:0000920 "cytokinetic cell separation"
evidence=IEA] [GO:0000921 "septin ring assembly" evidence=IEA]
[GO:0006998 "nuclear envelope organization" evidence=IEA]
[GO:0051382 "kinetochore assembly" evidence=IEA] [GO:0042493
"response to drug" evidence=IEA] [GO:0043254 "regulation of protein
complex assembly" evidence=IEA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0007096 "regulation of exit
from mitosis" evidence=IEA] [GO:0003688 "DNA replication origin
binding" evidence=IEA] [GO:0043295 "glutathione binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043291 "RAVE
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031518 "CBF3 complex" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
UniPathway:UPA00143 EMBL:BN001307 GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 EMBL:AACD01000038 GO:GO:0006511
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 EMBL:U75874
RefSeq:XP_659906.1 HSSP:P34991 ProteinModelPortal:Q5BAX8 SMR:Q5BAX8
STRING:Q5BAX8 GeneID:2874613 KEGG:ani:AN2302.2 OMA:IMNILEV
OrthoDB:EOG4T1MX2 Uniprot:Q5BAX8
Length = 161
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 57/118 (48%), Positives = 79/118 (66%)
Query: 6 SQTIKHMVED-GCADSVIPLLNVRGTILSMVIEYLKKHVE--AKTTEDD--------LKN 54
S IK+M+ED G IP+ NV +LS V+E+ H + +DD ++
Sbjct: 26 SLLIKNMLEDLGDPTEPIPIPNVSENVLSKVLEWCAHHRNDPPSSADDDDSRRKTTDIEE 85
Query: 55 WDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQNDF 112
WD F ++ Q+ LF++++AANYLDIK LLD+ C+TVA+MIKGKSPEEIR+TF+IQNDF
Sbjct: 86 WDQKFMQVDQEMLFEIILAANYLDIKPLLDIGCKTVANMIKGKSPEEIRKTFNIQNDF 143
>FB|FBgn0034863 [details] [associations]
symbol:skpF "skpF" species:7227 "Drosophila melanogaster"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0000152 "nuclear ubiquitin ligase complex" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
EMBL:AE013599 GO:GO:0016567 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0006511 GO:GO:0004842 eggNOG:COG5201
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GeneTree:ENSGT00390000012652 HSSP:P34991
EMBL:AY118610 RefSeq:NP_611796.1 UniGene:Dm.18854 SMR:Q9W1Q0
IntAct:Q9W1Q0 MINT:MINT-783087 STRING:Q9W1Q0
EnsemblMetazoa:FBtr0072022 GeneID:37713 KEGG:dme:Dmel_CG12227
UCSC:CG12227-RA CTD:37713 FlyBase:FBgn0034863 InParanoid:Q9W1Q0
OMA:PVEAEND OrthoDB:EOG45QFWH GenomeRNAi:37713 NextBio:805037
Uniprot:Q9W1Q0
Length = 171
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 59/122 (48%), Positives = 79/122 (64%)
Query: 6 SQTIKHMVEDGCA-----DSVIPLLNVRGTILSMVIEYLKKHVE--AKTTEDD------- 51
S TIK ++ED C D++IPL NV TIL V+ + K H E A+ E++
Sbjct: 24 SSTIKTLLED-CPVEAENDTLIPLPNVNSTILKKVLIWAKHHREDIAEENEEEAAKSVAV 82
Query: 52 -LKNWDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQN 110
+ WD +F + Q TLF+L++AANYLDI +LL+ C TVA+MIKG++ EEIRQTFHI N
Sbjct: 83 QITPWDAEFLSMDQGTLFELILAANYLDIPNLLNAACMTVANMIKGRTTEEIRQTFHITN 142
Query: 111 DF 112
DF
Sbjct: 143 DF 144
>TAIR|locus:2061709 [details] [associations]
symbol:MEO "AT2G20160" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 HSSP:P63208
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 EMBL:AC006081
IPI:IPI00536504 PIR:G84585 RefSeq:NP_565467.1 UniGene:At.66224
ProteinModelPortal:Q9SL65 SMR:Q9SL65 IntAct:Q9SL65 STRING:Q9SL65
EnsemblPlants:AT2G20160.1 GeneID:816536 KEGG:ath:AT2G20160
TAIR:At2g20160 InParanoid:Q9SL65 OMA:LAIIIEY PhylomeDB:Q9SL65
Genevestigator:Q9SL65 Uniprot:Q9SL65
Length = 150
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 50/113 (44%), Positives = 73/113 (64%)
Query: 1 AVMLESQTIKHMVEDGCADSVIPLLNVRGTILSMVIEYLKKHVEAKTTEDDLKNWDVDFA 60
AV + Q + HM++D CAD I L NV G IL+++IEY KKHV+ +++ WD +F
Sbjct: 21 AVARKMQMVAHMIDDDCADKAIRLQNVTGKILAIIIEYCKKHVDDVEAKNEFVTWDAEFV 80
Query: 61 K-LGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQNDF 112
K + DTLF LL AA+YL + L +L+ Q +AD K+ EIR+ F+I+ND+
Sbjct: 81 KNIDMDTLFKLLDAADYLIVIGLKNLIAQAIADYTADKTVNEIRELFNIENDY 133
>UNIPROTKB|E7ERH2 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9606 "Homo sapiens" [GO:0005829 "cytosol" evidence=IEA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 GO:GO:0005829 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0006511 GO:GO:0019005 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 HGNC:HGNC:10899
ChiTaRS:SKP1 EMBL:AC104109 EMBL:AC011336 IPI:IPI00979610
ProteinModelPortal:E7ERH2 SMR:E7ERH2 Ensembl:ENST00000519321
ArrayExpress:E7ERH2 Bgee:E7ERH2 Uniprot:E7ERH2
Length = 142
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 59/121 (48%), Positives = 78/121 (64%)
Query: 5 ESQTIKHMVED-GCADS----VIPLLNVRGTILSMVIEYLKKHVE-----------AKTT 48
+S TIK M+ED G D +PL NV IL VI++ H + K T
Sbjct: 23 QSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 82
Query: 49 EDDLKNWDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHI 108
DD+ WD +F K+ Q TLF+L++AANYLDIK LLD+ C+TVA+MIKGK+PEEIR+TF+I
Sbjct: 83 -DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNI 141
Query: 109 Q 109
+
Sbjct: 142 K 142
>WB|WBGene00004808 [details] [associations]
symbol:skr-2 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0007126 "meiosis" evidence=IMP]
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IMP] [GO:0000239 "pachytene" evidence=IMP] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IPI]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 GO:GO:0008340 GO:GO:0009792
GO:GO:0000132 GO:GO:0040007 GO:GO:0018991 GO:GO:0040010
GO:GO:0008285 GO:GO:0008406 GO:GO:0002119 GO:GO:0040011
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0040035
GO:GO:0006511 GO:GO:0019005 GO:GO:0045132 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 OMA:IRRAFNI GO:GO:0000239
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:Z81084 EMBL:AF440506
PIR:T22268 RefSeq:NP_492512.1 UniGene:Cel.193 SMR:G5EDD8
IntAct:G5EDD8 EnsemblMetazoa:F46A9.4 GeneID:172773
KEGG:cel:CELE_F46A9.4 CTD:172773 WormBase:F46A9.4 NextBio:876949
Uniprot:G5EDD8
Length = 174
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 50/107 (46%), Positives = 71/107 (66%)
Query: 14 EDGCADSVIPLLNVRGTILSMVIEYLKKHVE--------AKTTEDDLKNWDVDFAKLGQD 65
++G IP+ NV +IL VI + KH K T+ +++WD F + Q
Sbjct: 51 DEGTNAEPIPVQNVTASILKKVINWCTKHQSDPIPTEDSEKKTDGSIQDWDKKFLDIDQG 110
Query: 66 TLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQNDF 112
TLF+L++AANYLDIK LLD+ CQ+VA+MIKGKSP+EIR+ F+I++DF
Sbjct: 111 TLFELILAANYLDIKGLLDVACQSVANMIKGKSPDEIRRAFNIKDDF 157
>UNIPROTKB|G5EDD8 [details] [associations]
symbol:skr-2 "SKR-2" species:6239 "Caenorhabditis elegans"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 GO:GO:0008340 GO:GO:0009792 GO:GO:0000132
GO:GO:0040007 GO:GO:0018991 GO:GO:0040010 GO:GO:0008285
GO:GO:0008406 GO:GO:0002119 GO:GO:0040011 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0040035 GO:GO:0006511
GO:GO:0019005 GO:GO:0045132 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 OMA:IRRAFNI
GO:GO:0000239 GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:Z81084
EMBL:AF440506 PIR:T22268 RefSeq:NP_492512.1 UniGene:Cel.193
SMR:G5EDD8 IntAct:G5EDD8 EnsemblMetazoa:F46A9.4 GeneID:172773
KEGG:cel:CELE_F46A9.4 CTD:172773 WormBase:F46A9.4 NextBio:876949
Uniprot:G5EDD8
Length = 174
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 50/107 (46%), Positives = 71/107 (66%)
Query: 14 EDGCADSVIPLLNVRGTILSMVIEYLKKHVE--------AKTTEDDLKNWDVDFAKLGQD 65
++G IP+ NV +IL VI + KH K T+ +++WD F + Q
Sbjct: 51 DEGTNAEPIPVQNVTASILKKVINWCTKHQSDPIPTEDSEKKTDGSIQDWDKKFLDIDQG 110
Query: 66 TLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQNDF 112
TLF+L++AANYLDIK LLD+ CQ+VA+MIKGKSP+EIR+ F+I++DF
Sbjct: 111 TLFELILAANYLDIKGLLDVACQSVANMIKGKSPDEIRRAFNIKDDF 157
>UNIPROTKB|G4N3J5 [details] [associations]
symbol:MGG_04978 "E3 ubiquitin ligase complex SCF subunit
scon-3" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
EMBL:CM001233 GO:GO:0016874 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0006511 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
RefSeq:XP_003712477.1 ProteinModelPortal:G4N3J5 SMR:G4N3J5
EnsemblFungi:MGG_04978T0 GeneID:2675549 KEGG:mgr:MGG_04978
Uniprot:G4N3J5
Length = 168
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 54/127 (42%), Positives = 80/127 (62%)
Query: 1 AVMLESQTIKHMV----EDGCADSVIPLLNVRGTILSMVIEYLKKH-----------VEA 45
AV S+ IK ++ E+ A + IP+ NV +L V+E+ + H E+
Sbjct: 24 AVACRSRLIKDLIGDLGEEMVASTPIPIPNVSEAVLRKVLEWCEHHRNDPVQTSDEDSES 83
Query: 46 KTTEDDLKNWDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQT 105
+ D+ WD F ++ Q+ LF++++A+NYLDIK LLD+ C+TVA+MIKGKSPEEIR+T
Sbjct: 84 RKKTTDIDEWDQKFMQVDQEMLFEIILASNYLDIKPLLDVGCKTVANMIKGKSPEEIRKT 143
Query: 106 FHIQNDF 112
F+I NDF
Sbjct: 144 FNITNDF 150
>UNIPROTKB|G3MZV0 [details] [associations]
symbol:G3MZV0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GeneTree:ENSGT00390000012652 OMA:IMNILEV
EMBL:DAAA02025649 PRIDE:G3MZV0 Ensembl:ENSBTAT00000063619
NextBio:20927407 Uniprot:G3MZV0
Length = 160
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 58/120 (48%), Positives = 77/120 (64%)
Query: 5 ESQTIKHMVED-GCADS----VIPLLNVRGTILSMVIEYLK------KHVEAKTTE-DDL 52
+S TIK ++ED G D +PL NV IL + K + E K DD+
Sbjct: 23 QSVTIKTVLEDLGMDDEGDDDPVPLPNVNAAILKKWCTHHKDDPPPPEDDENKEKRTDDI 82
Query: 53 KNWDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQNDF 112
WD +F K+ Q TLF+L++AANYLDIK LLD+ C+TVA+MIKGK+ EEIR+TF+I+NDF
Sbjct: 83 PVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTREEIRKTFNIKNDF 142
>POMBASE|SPBC409.05 [details] [associations]
symbol:skp1 "SCF ubiquitin ligase complex subunit Skp1"
species:4896 "Schizosaccharomyces pombe" [GO:0000920 "cytokinetic
cell separation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006998 "nuclear envelope organization"
evidence=IMP] [GO:0007035 "vacuolar acidification" evidence=ISO]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IMP]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IGI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0042493
"response to drug" evidence=IGI] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IC] [GO:0043291 "RAVE complex" evidence=IPI]
[GO:0045841 "negative regulation of mitotic metaphase/anaphase
transition" evidence=IMP] [GO:0070072 "vacuolar proton-transporting
V-type ATPase complex assembly" evidence=TAS] [GO:2000060 "positive
regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 PomBase:SPBC409.05
GO:GO:0005829 GO:GO:0005634 GO:GO:0005773 GO:GO:0007095
GO:GO:0007067 GO:GO:0042493 EMBL:CU329671 GenomeReviews:CU329671_GR
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006998
GO:GO:0030163 GO:GO:0000920 GO:GO:0006511 GO:GO:0019005
GO:GO:0070072 HSSP:P63208 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GO:GO:2000060 GO:GO:0007035 GO:GO:0045841
EMBL:AB027472 GO:GO:0043291 OMA:VIQWCTY OrthoDB:EOG4T1MX2
EMBL:AB067633 EMBL:AF071066 PIR:T45459 RefSeq:NP_595455.1
ProteinModelPortal:Q9Y709 SMR:Q9Y709 IntAct:Q9Y709 STRING:Q9Y709
EnsemblFungi:SPBC409.05.1 GeneID:2540917 KEGG:spo:SPBC409.05
NextBio:20802032 Uniprot:Q9Y709
Length = 161
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 54/120 (45%), Positives = 78/120 (65%)
Query: 6 SQTIKHMVED-GCADSVIPLLNVRGTILSMVIEYLKKH---VEAKTTED---------DL 52
S IK+M+ED G + IPL NV +L V+E+ + H + + T E+ D+
Sbjct: 24 SMLIKNMLEDVGEINVPIPLPNVSSNVLRKVLEWCEHHKNDLYSGTEEESDIRLKKSTDI 83
Query: 53 KNWDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQNDF 112
WD F + Q+ LF++++A+NYLDIK LLD C+TVA+MI+GKSPE+IR+TF+I NDF
Sbjct: 84 DEWDRKFMAVDQEMLFEIVLASNYLDIKPLLDTGCKTVANMIRGKSPEDIRKTFNIPNDF 143
>WB|WBGene00004809 [details] [associations]
symbol:skr-3 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IMP]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 GO:GO:0006952
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 OMA:ENDFTHE EMBL:Z83109
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:AF440507 PIR:T22198
RefSeq:NP_507059.1 UniGene:Cel.192 ProteinModelPortal:G5EE67
SMR:G5EE67 EnsemblMetazoa:F44G3.6.1 EnsemblMetazoa:F44G3.6.2
GeneID:180081 KEGG:cel:CELE_F44G3.6 CTD:180081 WormBase:F44G3.6
NextBio:908014 Uniprot:G5EE67
Length = 167
Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 51/125 (40%), Positives = 79/125 (63%)
Query: 2 VMLESQTIKHMVED-GCADS------VIPLLNVRGTILSMVIEYLKKHV--EAKTTED-- 50
V+ +S+TI ++++ G +S IPL V TIL +I + + H E K ++
Sbjct: 26 VISQSKTITDIIQNLGIEESGSTSEDTIPLQKVTSTILEKIITWCEHHADDEPKKVDENK 85
Query: 51 ---DLKNWDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFH 107
D+ WD +F K+ Q TLF++++AANYLDI+ LLD+ Q VA+M+KGK+P +IR F+
Sbjct: 86 KTVDISEWDAEFMKVDQGTLFEIILAANYLDIRGLLDVTTQNVANMMKGKTPSQIRTLFN 145
Query: 108 IQNDF 112
I+NDF
Sbjct: 146 IENDF 150
>SGD|S000002736 [details] [associations]
symbol:SKP1 "Evolutionarily conserved kinetochore protein"
species:4932 "Saccharomyces cerevisiae" [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0000921 "septin ring assembly" evidence=IMP] [GO:0000776
"kinetochore" evidence=IEA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006461 "protein complex assembly" evidence=IDA]
[GO:0003688 "DNA replication origin binding" evidence=IPI]
[GO:0045116 "protein neddylation" evidence=IGI;IMP] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0031518 "CBF3 complex" evidence=IGI;IDA;IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA;IPI]
[GO:0000777 "condensed chromosome kinetochore" evidence=IEA]
[GO:0043291 "RAVE complex" evidence=IPI] [GO:0051382 "kinetochore
assembly" evidence=IMP;IDA] [GO:0043254 "regulation of protein
complex assembly" evidence=IPI] [GO:0007035 "vacuolar
acidification" evidence=IGI;IMP] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0007096 "regulation of
exit from mitosis" evidence=IMP;IPI] [GO:0000910 "cytokinesis"
evidence=IMP] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
UniPathway:UPA00143 SGD:S000002736 GO:GO:0005634 GO:GO:0005773
GO:GO:0000086 GO:GO:0000776 GO:GO:0000082 EMBL:BK006938
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0003688
GO:GO:0000910 GO:GO:0019005 GO:GO:0007096 GO:GO:0000921
GO:GO:0042787 GO:GO:0051382 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 EMBL:U32517 GO:GO:0000777 GO:GO:0007035
GO:GO:0031518 GO:GO:0031146 PDB:1NEX PDB:3MKS PDB:3V7D PDBsum:1NEX
PDBsum:3MKS PDBsum:3V7D GO:GO:0045116 GO:GO:0043254
RefSeq:NP_010619.3 GeneID:851932 KEGG:sce:YDR332W
RefSeq:NP_010615.3 GeneID:851928 KEGG:sce:YDR328C GO:GO:0043291
GeneTree:ENSGT00390000012652 OrthoDB:EOG4T1MX2 EMBL:U43179
EMBL:U61764 EMBL:AY557730 PIR:S59793 ProteinModelPortal:P52286
SMR:P52286 DIP:DIP-1236N IntAct:P52286 MINT:MINT-384072
STRING:P52286 PaxDb:P52286 PeptideAtlas:P52286 PRIDE:P52286
EnsemblFungi:YDR328C OMA:PVEIANG EvolutionaryTrace:P52286
NextBio:969983 Genevestigator:P52286 GermOnline:YDR328C
Uniprot:P52286
Length = 194
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 47/101 (46%), Positives = 72/101 (71%)
Query: 21 VIPLLNVRGTILSMVIEYLKKHVEAK-TTEDD--------LKNWDVDFAKLGQDTLFDLL 71
V+P+ NVR ++L VIE+ + H ++ EDD + +WD +F K+ Q+ L++++
Sbjct: 76 VMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSRKSAPVDSWDREFLKVDQEMLYEII 135
Query: 72 MAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQNDF 112
+AANYL+IK LLD C+ VA+MI+G+SPEEIR+TF+I NDF
Sbjct: 136 LAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDF 176
>TAIR|locus:2085201 [details] [associations]
symbol:SK6 "AT3G53060" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=TAS]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
GO:GO:0019005 eggNOG:COG5201 KO:K03094 PANTHER:PTHR11165
SUPFAM:SSF81382 EMBL:AL132969 EMBL:DQ446762 EMBL:DQ653150
IPI:IPI00533585 PIR:T47563 RefSeq:NP_566978.1 UniGene:At.53910
ProteinModelPortal:Q1PEF6 SMR:Q1PEF6 STRING:Q1PEF6
EnsemblPlants:AT3G53060.1 GeneID:824472 KEGG:ath:AT3G53060
TAIR:At3g53060 InParanoid:Q1PEF6 Genevestigator:Q1PEF6
Uniprot:Q1PEF6
Length = 85
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 47/78 (60%), Positives = 58/78 (74%)
Query: 9 IKHMVEDGCADSVIPLLNVRGTILSMVIEYLKKHVEAKTTEDDLKNWDVDFAK-LGQDTL 67
IK M ED CAD+ IPL NV IL +VIEY KKHV ++ E+DLK WD +F K + Q L
Sbjct: 3 IKGMAEDDCADNGIPLPNVTSKILLLVIEYCKKHV-VESKEEDLKKWDAEFMKKMEQSIL 61
Query: 68 FDLLMAANYLDIKSLLDL 85
FD++MAANYL+I+SLLDL
Sbjct: 62 FDVMMAANYLNIQSLLDL 79
>FB|FBgn0026175 [details] [associations]
symbol:skpC "skpC" species:7227 "Drosophila melanogaster"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
EMBL:AE014298 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 eggNOG:COG5201 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
GeneTree:ENSGT00390000012652 HSSP:P34991 OrthoDB:EOG4K6DMM
EMBL:AF220068 EMBL:BT120007 RefSeq:NP_608358.1 UniGene:Dm.26675
SMR:Q9VWC4 IntAct:Q9VWC4 MINT:MINT-763311 STRING:Q9VWC4
EnsemblMetazoa:FBtr0074797 GeneID:32996 KEGG:dme:Dmel_CG11941
UCSC:CG11941-RA CTD:32996 FlyBase:FBgn0026175 InParanoid:Q9VWC4
OMA:HMIEESS GenomeRNAi:32996 NextBio:781428 Uniprot:Q9VWC4
Length = 158
Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 49/121 (40%), Positives = 77/121 (63%)
Query: 6 SQTIKHMVEDGCADS----VIPLLNVRGTILSMVIEYLKKHVE-----AKTTE------D 50
S+TIK M+E ++ ++PL V ILS ++ ++ H + A+ E
Sbjct: 26 SETIKTMLEVSAVENDENAIVPLPKVNAFILSKILTWIYHHKDDDAHGAEGVELSPQSPH 85
Query: 51 DLKNWDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQN 110
D+ WD +F + Q TLF++++AANYL+IK L+DL C+TVA+MI+GK+PEEIR TF+I +
Sbjct: 86 DISAWDANFINVDQPTLFEIILAANYLEIKGLVDLCCKTVANMIRGKTPEEIRHTFNIPD 145
Query: 111 D 111
+
Sbjct: 146 E 146
>UNIPROTKB|E5RJR5 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 HGNC:HGNC:10899 ChiTaRS:SKP1
EMBL:AC104109 EMBL:AC011336 IPI:IPI00974176
ProteinModelPortal:E5RJR5 SMR:E5RJR5 Ensembl:ENST00000521216
ArrayExpress:E5RJR5 Bgee:E5RJR5 Uniprot:E5RJR5
Length = 163
Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 58/124 (46%), Positives = 73/124 (58%)
Query: 5 ESQTIKHMVED-GCADS----VIPLLNVRGTILSMVIEYLKKHVE-----------AKTT 48
+S TIK M+ED G D +PL NV IL VI++ H + K T
Sbjct: 23 QSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 82
Query: 49 EDDLKNWDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHI 108
DD+ WD +F K L AANYLDIK LLD+ C+TVA+MIKGK+PEEIR+TF+I
Sbjct: 83 -DDIPVWDQEFLKYTLRKTTVSLQAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNI 141
Query: 109 QNDF 112
+NDF
Sbjct: 142 KNDF 145
>TAIR|locus:2093074 [details] [associations]
symbol:SK7 "AT3G21840" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 EMBL:AB025634
GO:GO:0006511 GO:GO:0019005 HSSP:P63208 eggNOG:COG5201
HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 EMBL:BX841469 IPI:IPI00538513
RefSeq:NP_566693.1 UniGene:At.70383 ProteinModelPortal:Q9LSY0
SMR:Q9LSY0 IntAct:Q9LSY0 STRING:Q9LSY0 EnsemblPlants:AT3G21840.1
GeneID:821738 KEGG:ath:AT3G21840 TAIR:At3g21840 InParanoid:Q9LSY0
OMA:LMIIACK Genevestigator:Q9LSY0 Uniprot:Q9LSY0
Length = 125
Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 49/93 (52%), Positives = 62/93 (66%)
Query: 5 ESQTIKHMVEDGCADSVIPLLNVRGTILSMVIEYLKKH-VEAKT--TEDDLKNWDVDFAK 61
+ QTI HM+E C D+VIP+ NV IL MVIEY KH V+A +++DLK WD +F +
Sbjct: 25 QCQTIAHMIEAECTDNVIPVSNVTSEILEMVIEYCNKHHVDAANPCSDEDLKKWDKEFME 84
Query: 62 LGQDTLFDLLMAANYLDIKSLLDLLCQTVADMI 94
Q T+F L+ AA L IKSLL L QTVADM+
Sbjct: 85 KDQYTIFHLMNAAYDLHIKSLLALAYQTVADMV 117
>CGD|CAL0001786 [details] [associations]
symbol:SKP1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0043291 "RAVE complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0031518 "CBF3 complex"
evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0045116 "protein neddylation" evidence=IEA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IEA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0007035 "vacuolar acidification"
evidence=IEA] [GO:0000920 "cytokinetic cell separation"
evidence=IEA] [GO:0045841 "negative regulation of mitotic
metaphase/anaphase transition" evidence=IEA] [GO:0000921 "septin
ring assembly" evidence=IEA] [GO:0006998 "nuclear envelope
organization" evidence=IEA] [GO:0051382 "kinetochore assembly"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0043254 "regulation of protein complex assembly" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0007096 "regulation of exit from mitosis" evidence=IEA]
[GO:0003688 "DNA replication origin binding" evidence=IEA]
[GO:0019237 "centromeric DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 CGD:CAL0001786
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
EMBL:AACQ01000115 EMBL:AACQ01000111 RefSeq:XP_713872.1
RefSeq:XP_714072.1 ProteinModelPortal:Q59WE2 SMR:Q59WE2
STRING:Q59WE2 GeneID:3644272 GeneID:3644485 KEGG:cal:CaO19.11905
KEGG:cal:CaO19.4427 Uniprot:Q59WE2
Length = 164
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 49/122 (40%), Positives = 76/122 (62%)
Query: 5 ESQTIKHMVEDGCADSV-----IPLLNVRGTILSMVIEYLKKHVEAKTTEDD-------- 51
+S IK+M+ D D + IP NVR +L V+E+ + H +D+
Sbjct: 25 KSILIKNMINDLHPDGLEEDFEIPTPNVRANVLCKVLEWCEHHKNTVFQDDEDEDAKKSV 84
Query: 52 -LKNWDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQN 110
++ WD +F K+ Q+ L+++++AANYL+IK LL+ C+ VA+MIK KSPEE+R+TF+I N
Sbjct: 85 PVEEWDRNFLKVDQEMLYEIILAANYLNIKPLLESGCKMVAEMIKSKSPEELRRTFNIIN 144
Query: 111 DF 112
DF
Sbjct: 145 DF 146
>WB|WBGene00004811 [details] [associations]
symbol:skr-5 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 GeneTree:ENSGT00390000012652
HSSP:P34991 EMBL:Z92786 PIR:T22373 RefSeq:NP_507393.1
ProteinModelPortal:Q9XU27 SMR:Q9XU27 STRING:Q9XU27
EnsemblMetazoa:F47H4.10 GeneID:180148 KEGG:cel:CELE_F47H4.10
UCSC:F47H4.10 CTD:180148 WormBase:F47H4.10 InParanoid:Q9XU27
NextBio:908236 ArrayExpress:Q9XU27 Uniprot:Q9XU27
Length = 145
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 47/100 (47%), Positives = 65/100 (65%)
Query: 22 IPLLNVRGTILSMVIEYLKKH----------VEAKTTEDDLKNWDVDFAKLGQDTLFDLL 71
IPL NV I VIE+ + H VE K T DD+ WDV+F K+ + TLF+L+
Sbjct: 43 IPLKNVTSEIFKKVIEWCEYHAEDIPKPPDNVEEKRT-DDIGEWDVEFLKVDKGTLFELV 101
Query: 72 MAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQND 111
+AA YLDIK L ++ C+++A+ IKGKSPEEIR F++ N+
Sbjct: 102 LAATYLDIKGLFNVTCKSIANSIKGKSPEEIRAVFNLGNE 141
>WB|WBGene00004814 [details] [associations]
symbol:skr-8 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0010171
"body morphogenesis" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0000003 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0006511 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:CU457737
EMBL:AF440510 RefSeq:NP_503044.1 UniGene:Cel.189
ProteinModelPortal:G5ECY4 SMR:G5ECY4 EnsemblMetazoa:C52D10.9
GeneID:178495 KEGG:cel:CELE_C52D10.9 CTD:178495 WormBase:C52D10.9
OMA:NINVPEW NextBio:901360 Uniprot:G5ECY4
Length = 194
Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 49/106 (46%), Positives = 65/106 (61%)
Query: 14 EDGCADSVIPLLNVRGTILSMVIEYLKKHV-EAKTTEDDL--KN-----WDVDFAKLGQD 65
ED + IP+ NV G IL MVIE+ +KH EA EDD KN WD +F K+ +
Sbjct: 56 EDVASMDPIPITNVTGNILKMVIEWCEKHKGEALPVEDDSVPKNINVPEWDTNFLKIDNE 115
Query: 66 TLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQND 111
LFDL++A NYLD+ L++ C+ VA+M GKSP+E+R F I D
Sbjct: 116 VLFDLIVACNYLDVPGLMNYGCKMVANMAIGKSPDELRIIFAIPTD 161
>WB|WBGene00004813 [details] [associations]
symbol:skr-7 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0010171 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0006511 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:FO081134
EMBL:AF440509 RefSeq:NP_504221.1 UniGene:Cel.190
ProteinModelPortal:G5EDY3 SMR:G5EDY3 IntAct:G5EDY3
EnsemblMetazoa:Y47D7A.1 GeneID:178840 KEGG:cel:CELE_Y47D7A.1
CTD:178840 WormBase:Y47D7A.1 OMA:QANEAPI NextBio:902772
Uniprot:G5EDY3
Length = 194
Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 49/120 (40%), Positives = 71/120 (59%)
Query: 5 ESQTIKHMVEDGCADSV-----IPLLNVRGTILSMVIEYLKKHV-EAKTTEDDL--KN-- 54
+S T+ +++ A+ V IP+ NV G I+ MVIE+ +KH E EDD KN
Sbjct: 42 QSNTLSNLISTCVANDVASMDPIPITNVTGNIMKMVIEWCEKHKGETLPVEDDSVPKNIT 101
Query: 55 ---WDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQND 111
WD +F K+ D LFDL++A+N+LD+ L+ C+ VA+M GKSP+E+R F I D
Sbjct: 102 VPEWDTNFLKIDNDVLFDLIVASNFLDVPGLMSYACKMVANMAIGKSPDEMRVLFAIPTD 161
>FB|FBgn0026174 [details] [associations]
symbol:skpD "skpD" species:7227 "Drosophila melanogaster"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 HSSP:P34991 EMBL:AY070797 ProteinModelPortal:Q8T976
STRING:Q8T976 FlyBase:FBgn0026174 InParanoid:Q8T976
OrthoDB:EOG4K6DMM Bgee:Q8T976 Uniprot:Q8T976
Length = 182
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 49/121 (40%), Positives = 74/121 (61%)
Query: 6 SQTIKHMVEDGCADS----VIPLLNVRGTILSMVIEYLKKHVE----AKTTED------- 50
S+TIK M+E ++ V+PL V IL ++ + H + A E+
Sbjct: 50 SETIKTMLEVSAVENDENAVVPLPKVNAFILDKILTWAYHHKDDDDQAAEGEELTPQSPH 109
Query: 51 DLKNWDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQN 110
D+ WD +F + Q LF++ +AANYL+IK L DL C+T+A+MI+GK+PEEIRQTF+I++
Sbjct: 110 DISPWDANFINVDQPILFEITVAANYLEIKGLEDLCCKTLANMIRGKTPEEIRQTFNIED 169
Query: 111 D 111
D
Sbjct: 170 D 170
>WB|WBGene00004815 [details] [associations]
symbol:skr-9 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0010171
"body morphogenesis" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0000003 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0006511 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:CU457737
EMBL:AF440511 RefSeq:NP_503043.1 UniGene:Cel.188
ProteinModelPortal:G5EFA9 SMR:G5EFA9 IntAct:G5EFA9
EnsemblMetazoa:C52D10.7 GeneID:178494 KEGG:cel:CELE_C52D10.7
CTD:178494 WormBase:C52D10.7 OMA:KIVAMMA NextBio:901356
Uniprot:G5EFA9
Length = 194
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 48/106 (45%), Positives = 63/106 (59%)
Query: 14 EDGCADSVIPLLNVRGTILSMVIEYLKKHV-EAKTTEDD-------LKNWDVDFAKLGQD 65
ED + IP+ NV G IL MVIE+ +KH EA EDD + WD +F K+ D
Sbjct: 56 EDVASMDPIPITNVIGNILKMVIEWCEKHKGEALPVEDDSVPKHVNVPEWDTNFLKIDND 115
Query: 66 TLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQND 111
LFDL++A NYLD+ L++ C+ VA M GKSP+E+R F I D
Sbjct: 116 VLFDLIVACNYLDVPGLMNYGCKIVAMMAIGKSPDELRIIFAIPTD 161
>WB|WBGene00004816 [details] [associations]
symbol:skr-10 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0002164 "larval development" evidence=IMP]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0040032
"post-embryonic body morphogenesis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IPI] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0008283 GO:GO:0000003 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 GO:GO:0019005
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GO:GO:0040032 EMBL:AL110479
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:AF440512 PIR:T26386
RefSeq:NP_502902.1 UniGene:Cel.187 ProteinModelPortal:G5EG39
SMR:G5EG39 IntAct:G5EG39 EnsemblMetazoa:Y105C5B.13 GeneID:178447
KEGG:cel:CELE_Y105C5B.13 CTD:178447 WormBase:Y105C5B.13 OMA:PARGLTI
NextBio:901170 Uniprot:G5EG39
Length = 192
Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 48/120 (40%), Positives = 70/120 (58%)
Query: 5 ESQTIKHMV-----EDGCADSVIPLLNVRGTILSMVIEYLKKHV-EAKTTEDD------- 51
+S T+ +++ ED + IP+ NV G IL MVIE+ +KH EA +DD
Sbjct: 40 QSNTLSNLISTCAPEDVASMDPIPITNVTGNILKMVIEWCEKHKGEALPVDDDSVPKHIT 99
Query: 52 LKNWDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQND 111
+ WD +F K+ + LFDL++A NYLD+ L++ C+ VA M GKSP+E+R F I D
Sbjct: 100 VPEWDTNFLKIDNEVLFDLIVACNYLDVPGLMNYGCKMVAMMAIGKSPDELRIIFAIPTD 159
>TAIR|locus:2102370 [details] [associations]
symbol:SK15 "AT3G25650" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISS]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
GO:GO:0019005 EMBL:AP001313 eggNOG:COG5201 HOGENOM:HOG000172184
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 EMBL:DQ446700 IPI:IPI00519031 IPI:IPI00759250
RefSeq:NP_566773.1 UniGene:At.66493 ProteinModelPortal:Q1PEL7
SMR:Q1PEL7 IntAct:Q1PEL7 STRING:Q1PEL7 EnsemblPlants:AT3G25650.1
GeneID:822152 KEGG:ath:AT3G25650 TAIR:At3g25650 OMA:ENDFTHE
PhylomeDB:Q1PEL7 Genevestigator:Q1PEL7 Uniprot:Q1PEL7
Length = 177
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 36/74 (48%), Positives = 52/74 (70%)
Query: 40 KKHVEAKTTEDDLKNWDVDFAK-LGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKS 98
KK + +L WD +F K + +T+F L++AANYL+++ LL L CQTVAD IK K+
Sbjct: 76 KKKKPDDEAKQNLDAWDAEFMKNIDMETIFKLILAANYLNVEGLLGLTCQTVADYIKDKT 135
Query: 99 PEEIRQTFHIQNDF 112
PEE+R+ F+I+NDF
Sbjct: 136 PEEVRELFNIENDF 149
Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 32/84 (38%), Positives = 48/84 (57%)
Query: 7 QTIKHMVEDGCADSVIPLLNVRGTILSMVIEYLKKHVEA----KTTEDDLKNWDVDFAKL 62
Q +KH++ED C + IPL NV G ILS+V+EY KKHV+ +E+ K D AK
Sbjct: 27 QIVKHLLEDDCVINEIPLQNVTGNILSIVLEYCKKHVDDVVDDDASEEPKKKKPDDEAKQ 86
Query: 63 GQDTLFDLLMAANYLDIKSLLDLL 86
D +D N +D++++ L+
Sbjct: 87 NLDA-WDAEFMKN-IDMETIFKLI 108
>WB|WBGene00004810 [details] [associations]
symbol:skr-4 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382 OMA:EWDADFM
EMBL:AL117207 GeneTree:ENSGT00390000012652 HSSP:P34991
RefSeq:NP_507857.1 ProteinModelPortal:Q9U1Y9 SMR:Q9U1Y9
STRING:Q9U1Y9 PaxDb:Q9U1Y9 EnsemblMetazoa:Y60A3A.18 GeneID:191762
KEGG:cel:CELE_Y60A3A.18 UCSC:Y60A3A.18 CTD:191762
WormBase:Y60A3A.18 InParanoid:Q9U1Y9 NextBio:950246 Uniprot:Q9U1Y9
Length = 159
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 44/120 (36%), Positives = 68/120 (56%)
Query: 2 VMLESQTIKHMVEDGCADSVIPLLNVRGTILSMVIEYLKKHV--EAKTTED--------- 50
V+ +S+TI ++ IPL V IL +I + + H E K E
Sbjct: 26 VISQSKTISGFT----SEDTIPLPKVTSAILEKIITWCEHHADDEPKKVEKIEKGNKKTV 81
Query: 51 DLKNWDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQN 110
++ WD +F K+ Q TLF++++AANYLDI+ LL++ Q VA+M+KGK+P ++R F I N
Sbjct: 82 EISEWDAEFMKVDQGTLFEIILAANYLDIRGLLEVTTQNVANMMKGKTPSQVRTLFKIDN 141
>WB|WBGene00004818 [details] [associations]
symbol:skr-12 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0045132
"meiotic chromosome segregation" evidence=IMP] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 GO:GO:0045132 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:CU457737 EMBL:U60980
EMBL:AF440513 RefSeq:NP_503045.1 UniGene:Cel.20512
ProteinModelPortal:G5EGD5 SMR:G5EGD5 EnsemblMetazoa:C52D10.6.1
EnsemblMetazoa:C52D10.6.2 GeneID:178496 KEGG:cel:CELE_C52D10.6
CTD:178496 WormBase:C52D10.6 OMA:FDEHANN NextBio:901364
Uniprot:G5EGD5
Length = 172
Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 42/122 (34%), Positives = 72/122 (59%)
Query: 5 ESQTIKHMVED-GCA-DSV-----IPLLNVRGTILSMVIEYLKKHVEAKTTEDDLK---- 53
+S+T+ +++E+ G +++ IP+ NV G ++ V E+ +KH ED++
Sbjct: 34 QSKTLSNLIENLGYTIENIETRDPIPVTNVNGKTMAKVAEWCEKHKADAIPEDNMNVLKT 93
Query: 54 ----NWDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQ 109
WD F K+ + LFDL++A+N+LDIK L+ C+TV++M KGK+ E+R+ F I
Sbjct: 94 LTIPEWDQKFLKIEDEALFDLILASNFLDIKGLMYFGCKTVSNMAKGKTTAELREIFGIN 153
Query: 110 ND 111
D
Sbjct: 154 TD 155
>WB|WBGene00004812 [details] [associations]
symbol:skr-6 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 Gene3D:3.30.710.10
InterPro:IPR011333 GO:GO:0006511 eggNOG:COG5201
HOGENOM:HOG000172184 KO:K03094 PANTHER:PTHR11165 SUPFAM:SSF81382
GeneTree:ENSGT00390000012652 EMBL:AL023837 RefSeq:NP_507574.2
UniGene:Cel.36626 ProteinModelPortal:Q9U2N1 SMR:Q9U2N1
STRING:Q9U2N1 EnsemblMetazoa:Y37H2C.2 GeneID:191763
KEGG:cel:CELE_Y37H2C.2 UCSC:Y37H2C.2 CTD:191763 WormBase:Y37H2C.2
InParanoid:Q9U2N1 OMA:DHIMAAN NextBio:950250 Uniprot:Q9U2N1
Length = 106
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 36/90 (40%), Positives = 55/90 (61%)
Query: 22 IPLLNVRGTILSMVIEYLKKHVEAKTT-EDDLKNWDVDFAKLGQDTLFDLLMAANYLDIK 80
IPL V I +IEY + + ++ WD +F KL Q+TLFDL++AANYL+I+
Sbjct: 4 IPLTKVDAKIFEKIIEYCEHQGTPRPLLNGEIGEWDSEFLKLDQNTLFDLVLAANYLNIE 63
Query: 81 SLLDLLCQTVADMIKGKSPEEIRQTFHIQN 110
+L D+ Q +A+M+K +P +IR F + N
Sbjct: 64 NLFDVTTQFIANMMKNNTPSQIRARFGVSN 93
>WB|WBGene00004820 [details] [associations]
symbol:skr-14 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
HOGENOM:HOG000172184 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 GeneTree:ENSGT00390000012652
HSSP:P34991 EMBL:FO081134 RefSeq:NP_504220.3
ProteinModelPortal:Q9N3U9 SMR:Q9N3U9 STRING:Q9N3U9
EnsemblMetazoa:Y47D7A.8 GeneID:178839 KEGG:cel:CELE_Y47D7A.8
UCSC:Y47D7A.8 CTD:178839 WormBase:Y47D7A.8 InParanoid:Q9N3U9
OMA:RRERCKC NextBio:902768 ArrayExpress:Q9N3U9 Uniprot:Q9N3U9
Length = 197
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 42/122 (34%), Positives = 71/122 (58%)
Query: 5 ESQTIKHMVED-GCA-DSV-----IPLLNVRGTILSMVIEYLKKHVEAKTTEDDLK---- 53
+S+T+ +++E+ G +++ IP+ NV G + V E+ +KH ED++
Sbjct: 63 QSKTLSNLIENLGYTIENIETRDPIPVTNVNGKTMEKVAEWCEKHNADAIPEDNMNVLKT 122
Query: 54 ----NWDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQ 109
WD F K+ + LFDL++A+N+LDIK L+ C+TV++M KGK+ E+R+ F I
Sbjct: 123 LTIPEWDQKFLKIEDEALFDLILASNFLDIKGLMYYGCKTVSNMAKGKTTAELREIFGIN 182
Query: 110 ND 111
D
Sbjct: 183 TD 184
>WB|WBGene00004819 [details] [associations]
symbol:skr-13 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0045132
"meiotic chromosome segregation" evidence=IMP] InterPro:IPR001232
InterPro:IPR016072 InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931
SMART:SM00512 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 GO:GO:0045132 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:CU457737
EMBL:AF440514 RefSeq:NP_503042.1 UniGene:Cel.18172
ProteinModelPortal:G5EEX4 SMR:G5EEX4 EnsemblMetazoa:C52D10.8
GeneID:178493 KEGG:cel:CELE_C52D10.8 CTD:178493 WormBase:C52D10.8
OMA:KEEDTHA NextBio:901352 Uniprot:G5EEX4
Length = 172
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 42/122 (34%), Positives = 71/122 (58%)
Query: 5 ESQTIKHMVED-GCA-DSV-----IPLLNVRGTILSMVIEYLKKHVEAKTTEDDLK---- 53
+S+T+ +++E+ G +++ IP+ NV G ++ V E +KH ED++
Sbjct: 34 QSKTLSNLIENLGYTIENIETRDPIPVTNVNGKTMAKVAELCEKHKADAIPEDNMNVLKT 93
Query: 54 ----NWDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQ 109
WD F K+ + LFDL++A+N+LDIK L+ C+TV++M KGK+ E+R+ F I
Sbjct: 94 LTIPEWDQKFLKIEDEALFDLILASNFLDIKGLMYYGCKTVSNMAKGKTTAELREIFGIN 153
Query: 110 ND 111
D
Sbjct: 154 TD 155
>WB|WBGene00004823 [details] [associations]
symbol:skr-17 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 GO:GO:0040018 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0040035 GO:GO:0006511 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 EMBL:FO080131 GeneTree:ENSGT00390000012652
HSSP:P34991 EMBL:AF440517 PIR:T15426 RefSeq:NP_495638.1
UniGene:Cel.18244 ProteinModelPortal:G5EGN7 SMR:G5EGN7
EnsemblMetazoa:C06A8.4 GeneID:174257 KEGG:cel:CELE_C06A8.4
CTD:174257 WormBase:C06A8.4 OMA:CKTVANS NextBio:883257
Uniprot:G5EGN7
Length = 180
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 47/124 (37%), Positives = 69/124 (55%)
Query: 1 AVMLESQ---TIKHMVEDG--CAD-SVIPLLNVRGTILSMVIEYLKKHVE----AKTTED 50
A++L S TI+ + D CA+ +P+ NV G L ++IE+ KH E E
Sbjct: 41 ALLLSSTLAATIRELGYDKEYCAELKPVPVNNVVGFTLKLLIEWCDKHKEDDPAIALAEK 100
Query: 51 DLKN-----WDVDF-AKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQ 104
D KN WD F ++L LFDL+ AA +LD+ L++ C+TVA+ KGK+ EE+R+
Sbjct: 101 DKKNICIPSWDRHFLSRLPMSNLFDLITAAYHLDVTGLINYGCKTVANSAKGKNAEEMRE 160
Query: 105 TFHI 108
F I
Sbjct: 161 LFGI 164
>FB|FBgn0031074 [details] [associations]
symbol:skpE "skpE" species:7227 "Drosophila melanogaster"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 GO:GO:0022008 EMBL:AE014298
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GeneTree:ENSGT00390000012652 HSSP:P34991
OrthoDB:EOG4K6DMM EMBL:AY752578 EMBL:AY752581 RefSeq:NP_608359.1
UniGene:Dm.17269 SMR:Q9VWC3 IntAct:Q9VWC3 STRING:Q9VWC3
EnsemblMetazoa:FBtr0074806 GeneID:32997 KEGG:dme:Dmel_CG11942
UCSC:CG11942-RA CTD:32997 FlyBase:FBgn0031074 InParanoid:Q9VWC3
OMA:QNDENAI GenomeRNAi:32997 NextBio:781433 Uniprot:Q9VWC3
Length = 167
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 42/125 (33%), Positives = 69/125 (55%)
Query: 2 VMLESQTIKHMVEDGCA----DSVIPLLNVRGTILSMVIEYLKKHVEA--KTTE-DDLKN 54
V + S+TIK M++ ++++PL +V L ++ + H + ++TE ++LK
Sbjct: 22 VAMVSETIKTMLDHFAVQNDENAIVPLHSVSTFTLGKILAWANHHKDDDDQSTEGEELKP 81
Query: 55 --------WDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTF 106
WD F + TL ++++AA L IK LL+L VA+MI+GK+PEEIR F
Sbjct: 82 RRPYAISPWDAIFLMVNSTTLLEIILAAKQLQIKGLLELTYNVVANMIRGKTPEEIRFIF 141
Query: 107 HIQND 111
+I D
Sbjct: 142 NIPED 146
>WB|WBGene00004821 [details] [associations]
symbol:skr-15 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
GO:GO:0040010 GO:GO:0006974 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0006511 KO:K03094 InterPro:IPR016897
PANTHER:PTHR11165 PIRSF:PIRSF028729 SUPFAM:SSF81382
GeneTree:ENSGT00390000012652 HSSP:P34991 EMBL:AF440516
EMBL:FO080579 PIR:T33615 RefSeq:NP_494662.1 UniGene:Cel.185
ProteinModelPortal:G5EE88 SMR:G5EE88 EnsemblMetazoa:F54D10.1
GeneID:173729 KEGG:cel:CELE_F54D10.1 CTD:173729 WormBase:F54D10.1
OMA:YSIESND NextBio:880833 Uniprot:G5EE88
Length = 184
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 35/96 (36%), Positives = 53/96 (55%)
Query: 22 IPLLNVRGTILSMVIEYLKKHV-----EAKTTEDD-LKNWDVDFAKLGQDTLFDLLMAAN 75
IP+ V G L +V+E+ + H EA + + L WD F + D L DL+ A+N
Sbjct: 64 IPIEKVNGKTLKLVVEWCEHHKADPVPEAYPSGNTVLPVWDRKFVDIEHDALTDLVNASN 123
Query: 76 YLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQND 111
+L++ +LL C+ +A + KG SPEE+R F I D
Sbjct: 124 FLEVMTLLTYCCKFIAGLAKGMSPEEMRVFFCIPTD 159
>WB|WBGene00004822 [details] [associations]
symbol:skr-16 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
eggNOG:COG5201 KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165
PIRSF:PIRSF028729 SUPFAM:SSF81382 GeneTree:ENSGT00390000012652
EMBL:FO080771 PIR:T34158 RefSeq:NP_501128.2
ProteinModelPortal:Q18567 SMR:Q18567 STRING:Q18567 PaxDb:Q18567
EnsemblMetazoa:C42D4.6 GeneID:191765 KEGG:cel:CELE_C42D4.6
UCSC:C42D4.6 CTD:191765 WormBase:C42D4.6 HOGENOM:HOG000018058
InParanoid:Q18567 OMA:NMAKGKN NextBio:950258 Uniprot:Q18567
Length = 181
Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 35/100 (35%), Positives = 54/100 (54%)
Query: 19 DSVIPLLNVRGTILSMVIEYLKKHVE-AKTTED-----DLKNWDVDFAK-LGQDTLFDLL 71
D+ I + V+G L+ V+E+ H + K L WD + K L L DL+
Sbjct: 66 DTPIQVEKVQGDTLNRVLEWCNNHRDDGKYVSQCGPSLRLPQWDFRWLKDLDNQELVDLI 125
Query: 72 MAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQND 111
A+N L ++ L+D C+TVA+M KGK+P ++R+ F I D
Sbjct: 126 NASNDLQMQQLMDYACKTVANMAKGKNPAQLRELFGILTD 165
>WB|WBGene00004826 [details] [associations]
symbol:skr-20 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
KO:K03094 InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GeneTree:ENSGT00390000012652 HSSP:P34991
EMBL:Z50755 EMBL:AF440519 PIR:T24207 RefSeq:NP_510192.1
UniGene:Cel.183 SMR:G5EE98 IntAct:G5EE98 EnsemblMetazoa:R12H7.5
GeneID:181445 KEGG:cel:CELE_R12H7.5 CTD:181445 WormBase:R12H7.5
OMA:FINQKFI NextBio:913974 Uniprot:G5EE98
Length = 173
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 35/116 (30%), Positives = 60/116 (51%)
Query: 4 LESQTIKHMVEDGCADSVIPLL-NVRGTILSMVIEYLKKHVE-------AKTTEDDLKNW 55
+ + I H V D + P+L +I+ VIE+L + + +K D W
Sbjct: 33 INQKFIDHGVNDRNCERADPILVPFHSSIVQAVIEWLYHYQDNPLARRDSKIRYHDFSEW 92
Query: 56 DVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQND 111
D F + LF LL A++ L ++ L+++ C A++I+GKS EEIR+ + I++D
Sbjct: 93 DKQFFNVESGVLFALLNASHALGVEDLMNMGCAAAAELIRGKSTEEIRKIYGIRSD 148
>UNIPROTKB|G5EE98 [details] [associations]
symbol:skr-20 "Protein SKR-20" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GeneTree:ENSGT00390000012652 HSSP:P34991
EMBL:Z50755 EMBL:AF440519 PIR:T24207 RefSeq:NP_510192.1
UniGene:Cel.183 SMR:G5EE98 IntAct:G5EE98 EnsemblMetazoa:R12H7.5
GeneID:181445 KEGG:cel:CELE_R12H7.5 CTD:181445 WormBase:R12H7.5
OMA:FINQKFI NextBio:913974 Uniprot:G5EE98
Length = 173
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 35/116 (30%), Positives = 60/116 (51%)
Query: 4 LESQTIKHMVEDGCADSVIPLL-NVRGTILSMVIEYLKKHVE-------AKTTEDDLKNW 55
+ + I H V D + P+L +I+ VIE+L + + +K D W
Sbjct: 33 INQKFIDHGVNDRNCERADPILVPFHSSIVQAVIEWLYHYQDNPLARRDSKIRYHDFSEW 92
Query: 56 DVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHIQND 111
D F + LF LL A++ L ++ L+++ C A++I+GKS EEIR+ + I++D
Sbjct: 93 DKQFFNVESGVLFALLNASHALGVEDLMNMGCAAAAELIRGKSTEEIRKIYGIRSD 148
>TAIR|locus:505006407 [details] [associations]
symbol:SK21 "AT3G61415" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132962
GO:GO:0016567 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
GO:GO:0006511 GO:GO:0019005 HSSP:P63208 eggNOG:COG5201
PANTHER:PTHR11165 SUPFAM:SSF81382 HOGENOM:HOG000034103
ProtClustDB:CLSN2689298 EMBL:AY084971 IPI:IPI00527962
IPI:IPI00892309 RefSeq:NP_001118876.1 RefSeq:NP_567113.1
UniGene:At.34286 ProteinModelPortal:Q8LF97 SMR:Q8LF97
EnsemblPlants:AT3G61415.1 GeneID:825314 KEGG:ath:AT3G61415
TAIR:At3g61415 InParanoid:Q8LF97 OMA:MEDDIFT PhylomeDB:Q8LF97
Genevestigator:Q8LF97 Uniprot:Q8LF97
Length = 351
Score = 142 (55.0 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 29/85 (34%), Positives = 51/85 (60%)
Query: 27 VRGTILSMVIEYLKKHVEAKTTEDDLKNWDVDFAKLGQDTLFDLLMAANYLDIKSLLDLL 86
V +LS++ +Y + H + + K +D F ++ L +L AA+ L +K L+DL
Sbjct: 64 VNPAMLSLIFDYCRFHQVPGRSNKERKVYDEKFIRMDTKRLCELTSAADSLQLKPLVDLT 123
Query: 87 CQTVADMIKGKSPEEIRQTFHIQND 111
+ +A +I+GK+PEEIR+ FH+ +D
Sbjct: 124 SRALARIIEGKTPEEIREIFHLPDD 148
>TAIR|locus:2050709 [details] [associations]
symbol:SK20 "AT2G45950" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
InterPro:IPR001232 InterPro:IPR016072 InterPro:IPR016073
Pfam:PF01466 Pfam:PF03931 SMART:SM00512 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
GO:GO:0019005 eggNOG:COG5201 PANTHER:PTHR11165 SUPFAM:SSF81382
EMBL:AC004665 EMBL:AF370493 EMBL:AY081697 IPI:IPI00524579
IPI:IPI00846808 IPI:IPI00877396 PIR:T02452 RefSeq:NP_001078065.1
RefSeq:NP_566058.2 UniGene:At.12716 UniGene:At.49380
ProteinModelPortal:A8MQG7 SMR:A8MQG7 IntAct:A8MQG7
EnsemblPlants:AT2G45950.2 GeneID:819203 KEGG:ath:AT2G45950
TAIR:At2g45950 HOGENOM:HOG000034103 InParanoid:A8MQG7 OMA:DEIDPAM
PhylomeDB:A8MQG7 ProtClustDB:CLSN2689298 Genevestigator:A8MQG7
Uniprot:A8MQG7
Length = 352
Score = 141 (54.7 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 28/85 (32%), Positives = 51/85 (60%)
Query: 27 VRGTILSMVIEYLKKHVEAKTTEDDLKNWDVDFAKLGQDTLFDLLMAANYLDIKSLLDLL 86
V + S++++Y + H + + K +D F ++ L +L AA+ L +K L+DL
Sbjct: 64 VNPAMFSLILDYCRFHQLPGRSNKERKTYDERFIRMDTKRLCELTSAADSLQLKPLVDLT 123
Query: 87 CQTVADMIKGKSPEEIRQTFHIQND 111
+ +A +I+GK+PEEIR+ FH+ +D
Sbjct: 124 SRALARIIEGKNPEEIREIFHLPDD 148
>DICTYBASE|DDB_G0284889 [details] [associations]
symbol:DDB_G0284889 species:44689 "Dictyostelium
discoideum" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
Pfam:PF01466 dictyBase:DDB_G0284889 EMBL:AAFI02000073
Gene3D:3.30.710.10 InterPro:IPR011333 GO:GO:0006511 eggNOG:COG5201
PANTHER:PTHR11165 SUPFAM:SSF81382 RefSeq:XP_639912.1
ProteinModelPortal:Q54P05 EnsemblProtists:DDB0186240 GeneID:8624824
KEGG:ddi:DDB_G0284889 InParanoid:Q54P05 OMA:TEPRDEN Uniprot:Q54P05
Length = 404
Score = 125 (49.1 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 29/81 (35%), Positives = 47/81 (58%)
Query: 26 NVRGTILSMVIEYLKKHVEAKTTEDDLKNWDVDFAKLGQDTLFDLLMAANYLDIKSLLDL 85
++RG +L+ ++E+ K H T+ +D +F + L +L A+ +LDIKSL+ L
Sbjct: 127 DIRGCVLNSILEFCKFH-STNTSPILATQFDFNFIQKKPLNLCELASASYFLDIKSLVSL 185
Query: 86 LCQTVADMIKGKSPEEIRQTF 106
+ +A I KS EE+RQTF
Sbjct: 186 TSKEIATQISQKSAEELRQTF 206
>WB|WBGene00004825 [details] [associations]
symbol:skr-19 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GeneTree:ENSGT00390000012652 HSSP:P34991
EMBL:Z50755 EMBL:AF440518 RefSeq:NP_510193.4 UniGene:Cel.184
ProteinModelPortal:G5EC92 SMR:G5EC92 EnsemblMetazoa:R12H7.3
GeneID:181446 KEGG:cel:CELE_R12H7.3 CTD:181446 WormBase:R12H7.3
OMA:RKVIEWC Uniprot:G5EC92
Length = 155
Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 26/92 (28%), Positives = 46/92 (50%)
Query: 18 ADSVIPL-LNVRGTILSMVIEYLKKHV------EAKTTEDDLKNWDVDFAKLGQDTLFDL 70
AD + P+ L + T++ VIE+ H E++ +D+ +WD F + + LFD+
Sbjct: 47 ADQLQPIQLEIPATVMRKVIEWCDHHKHDPPYDESEPETNDIPDWDASFLMVRHNMLFDI 106
Query: 71 LMAANYLDIKSLLDLLCQTVADMIKGKSPEEI 102
+ AA + L + C+ V G++P EI
Sbjct: 107 IRAARDFTVPGLFAMCCRVV-----GQNPREI 133
>WB|WBGene00018935 [details] [associations]
symbol:skr-18 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] InterPro:IPR001232 InterPro:IPR016072
InterPro:IPR016073 Pfam:PF01466 Pfam:PF03931 SMART:SM00512
GO:GO:0002009 GO:GO:0006898 GO:GO:0040010 GO:GO:0040011
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0040035
GO:GO:0006511 eggNOG:COG5201 HOGENOM:HOG000172184 KO:K03094
InterPro:IPR016897 PANTHER:PTHR11165 PIRSF:PIRSF028729
SUPFAM:SSF81382 GeneTree:ENSGT00390000012652 HSSP:P34991
EMBL:FO081484 RefSeq:NP_741300.1 UniGene:Cel.25436
ProteinModelPortal:Q8WSN2 SMR:Q8WSN2 STRING:Q8WSN2
EnsemblMetazoa:F56B3.12 GeneID:260116 KEGG:cel:CELE_F56B3.12
CTD:260116 WormBase:F56B3.12 InParanoid:Q8WSN2 NextBio:952880
Uniprot:Q8WSN2
Length = 183
Score = 97 (39.2 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 39/116 (33%), Positives = 57/116 (49%)
Query: 6 SQTIKHMVED--GCAD-SVIPLLNVRGTILSMVIEYLKKHVE-----AKTTEDDLK---- 53
S TIK + D CA+ IP+ T L ++I++ +H AK + K
Sbjct: 53 STTIKELGYDKEDCAEIKPIPVDEHEYT-LDLLIKWCDQHKGDDPEIAKAEKGKKKVVIP 111
Query: 54 NWDVDF-AKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPEEIRQTFHI 108
+WD F + L L ++ AA LDI L++ QTVA I GKS EE+R+ F +
Sbjct: 112 SWDQHFFSVLPMGNLLAVIKAAYDLDITGLVNYGTQTVASRINGKSAEEMREIFQL 167
>FB|FBgn0034904 [details] [associations]
symbol:CG15800 species:7227 "Drosophila melanogaster"
[GO:0000152 "nuclear ubiquitin ligase complex" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001232 InterPro:IPR016072 Pfam:PF01466
EMBL:AE013599 GO:GO:0016567 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0006511 GO:GO:0004842 KO:K03094
PANTHER:PTHR11165 SUPFAM:SSF81382 GeneTree:ENSGT00390000012652
RefSeq:NP_611828.1 UniGene:Dm.33986 ProteinModelPortal:Q9W1J7
SMR:Q9W1J7 IntAct:Q9W1J7 MINT:MINT-4080370 STRING:Q9W1J7
PRIDE:Q9W1J7 EnsemblMetazoa:FBtr0072245 GeneID:37763
KEGG:dme:Dmel_CG15800 UCSC:CG15800-RA FlyBase:FBgn0034904
InParanoid:Q9W1J7 OMA:DWDKEFL OrthoDB:EOG415DWP PhylomeDB:Q9W1J7
GenomeRNAi:37763 NextBio:805295 Bgee:Q9W1J7 Uniprot:Q9W1J7
Length = 157
Score = 91 (37.1 bits), Expect = 0.00017, P = 0.00017
Identities = 30/113 (26%), Positives = 52/113 (46%)
Query: 2 VMLESQTIKHMVEDGCADSVIPLLNVRGTILSMVI---EYLKKHVE-----------AKT 47
V+ E + + ED D V+PL + +L ++ EY +KH E A+
Sbjct: 24 VIREMCRVGQVPED--EDFVLPLHGIHSNVLLKILLWAEYHEKHEEPAWVDSKDPLPAEE 81
Query: 48 TEDDLKNWDVDFAKLGQDTLFDLLMAANYLDIKSLLDLLCQTVADMIKGKSPE 100
E + +WD +F ++ D++ ++ NYLDI L L Q + + + PE
Sbjct: 82 IELQISDWDKEFLRVEIDSICKIMEGCNYLDIPWLYKLCAQKLV-FLSSREPE 133
>UNIPROTKB|E5RGM3 [details] [associations]
symbol:SKP1 "S-phase kinase-associated protein 1"
species:9606 "Homo sapiens" [GO:0005829 "cytosol" evidence=IEA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001232
InterPro:IPR016073 Pfam:PF03931 SMART:SM00512 GO:GO:0005829
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0006511
GO:GO:0019005 PANTHER:PTHR11165 HGNC:HGNC:10899 ChiTaRS:SKP1
EMBL:AC104109 EMBL:AC011336 IPI:IPI00978800
ProteinModelPortal:E5RGM3 SMR:E5RGM3 Ensembl:ENST00000520417
ArrayExpress:E5RGM3 Bgee:E5RGM3 Uniprot:E5RGM3
Length = 102
Score = 89 (36.4 bits), Expect = 0.00027, P = 0.00027
Identities = 30/81 (37%), Positives = 40/81 (49%)
Query: 5 ESQTIKHMVED-GCADS----VIPLLNVRGTILSMVIEYLKKHVE-----------AKTT 48
+S TIK M+ED G D +PL NV IL VI++ H + K T
Sbjct: 23 QSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 82
Query: 49 EDDLKNWDVDFAKLGQDTLFD 69
DD+ WD +F K+ Q TLF+
Sbjct: 83 -DDIPVWDQEFLKVDQGTLFE 102
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.136 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 128 114 0.00091 102 3 11 22 0.44 30
29 0.44 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 74
No. of states in DFA: 570 (61 KB)
Total size of DFA: 119 KB (2077 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.82u 0.11s 12.93t Elapsed: 00:00:00
Total cpu time: 12.82u 0.11s 12.93t Elapsed: 00:00:01
Start: Sat May 11 13:38:06 2013 End: Sat May 11 13:38:07 2013