BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040826
(347 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 164/310 (52%), Gaps = 14/310 (4%)
Query: 35 KRKSPK------PTKEIYSTTWSGLYRFSKDEIENAINNDWDRRFLGRGSAGLVYKGVLP 88
+RK P+ P +E L RFS E++ A +N ++ LGRG G VYKG L
Sbjct: 1 RRKKPQDHFFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA 60
Query: 89 SGQVVAIKHIYKSNNTD---SFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
G +VA+K + + F EVE +S H NL+ L G C+ E+ LVY + A G
Sbjct: 61 DGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANG 120
Query: 146 NLAQHLLRK---DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLE 202
++A L + L W +R +I A L YLH + D I+HRD+K NILL E+ E
Sbjct: 121 SVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFE 180
Query: 203 PKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQ 262
+ DFGLAK++ ++ V VRGTIG++ PEY++ K + +D++ +G++ L+L++GQ
Sbjct: 181 AVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ 240
Query: 263 KVIELDFDARDQLTRKARDVS--MGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKS 320
+ +L A D V + ++ ++ D L GN + E ++++A+LC S
Sbjct: 241 RAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSS 300
Query: 321 SKGRPTIDVV 330
RP + V
Sbjct: 301 PMERPKMSEV 310
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 166 bits (421), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 158/298 (53%), Gaps = 8/298 (2%)
Query: 41 PTKEIYSTTWSGLYRFSKDEIENAINNDWDRRFLGRGSAGLVYKGVLPSGQVVAIKHIYK 100
P +E L RFS E++ A +N ++ LGRG G VYKG L G +VA+K + +
Sbjct: 5 PAEEDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKE 64
Query: 101 SNNTD---SFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRK--- 154
F EVE +S H NL+ L G C+ E+ LVY + A G++A L +
Sbjct: 65 ERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPES 124
Query: 155 DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKML 214
L W +R +I A L YLH + D I+HRD+K NILL E+ E + DFGLAK++
Sbjct: 125 QPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 184
Query: 215 GMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQ 274
++ V VRG IG++ PEY++ K + +D++ +G++ L+L++GQ+ +L A D
Sbjct: 185 DYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDD 244
Query: 275 LTRKARDVS--MGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVV 330
V + ++ ++ D L GN + E ++++A+LC S RP + V
Sbjct: 245 DVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEV 302
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 157/294 (53%), Gaps = 13/294 (4%)
Query: 54 YRFSKDEIENAINNDWDRRFL-GRGSAGLVYKGVLPSGQVVAIKH--IYKSNNTDSFSRE 110
YR ++E A NN +D +FL G G G VYKGVL G VA+K S + F E
Sbjct: 27 YRVPLVDLEEATNN-FDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETE 85
Query: 111 VEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKD---SVLTWERRVKIL 167
+E LS RHP+LV L G C E E L+Y++ GNL +HL D ++WE+R++I
Sbjct: 86 IETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEIC 145
Query: 168 RDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKM-LGMEESKVFTDVR 226
A L YLH I+HRD+K NILL E PK++DFG++K ++++ + V+
Sbjct: 146 IGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVK 202
Query: 227 GTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDV-SMG 285
GT+GY+DPEY +LT SD+YSFG+V ++L + I R+ + V S
Sbjct: 203 GTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSL-PREMVNLAEWAVESHN 261
Query: 286 KRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWK 339
++ DP L I AV C+A SS+ RP++ V +++ A +
Sbjct: 262 NGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/295 (37%), Positives = 157/295 (53%), Gaps = 15/295 (5%)
Query: 54 YRFSKDEIENAINNDWDRRFL-GRGSAGLVYKGVLPSGQVVAIKH--IYKSNNTDSFSRE 110
YR ++E A NN +D +FL G G G VYKGVL G VA+K S + F E
Sbjct: 27 YRVPLVDLEEATNN-FDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETE 85
Query: 111 VEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKD---SVLTWERRVKIL 167
+E LS RHP+LV L G C E E L+Y++ GNL +HL D ++WE+R++I
Sbjct: 86 IETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEIC 145
Query: 168 RDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME--ESKVFTDV 225
A L YLH I+HRD+K NILL E PK++DFG++K G E ++ + V
Sbjct: 146 IGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKK-GTELGQTHLXXVV 201
Query: 226 RGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDV-SM 284
+GT+GY+DPEY +LT SD+YSFG+V ++L + I R+ + V S
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSL-PREMVNLAEWAVESH 260
Query: 285 GKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWK 339
++ DP L I AV C+A SS+ RP++ V +++ A +
Sbjct: 261 NNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 149/296 (50%), Gaps = 24/296 (8%)
Query: 53 LYRFSKDEIENAINNDWDRRF------LGRGSAGLVYKGVLPSGQVV-----AIKHIYKS 101
+ FS E++N NN +R +G G G+VYKG + + V A+ I
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 71
Query: 102 NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHL--LRKDSVLT 159
F +E++ +++ +H NLV L G +G + LVY + G+L L L L+
Sbjct: 72 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLS 131
Query: 160 WERRVKILRDCALALRYLH--HYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKML-GM 216
W R KI + A + +LH H+I HRDIK NILL E K+SDFGLA+
Sbjct: 132 WHMRCKIAQGAANGINFLHENHHI-----HRDIKSANILLDEAFTAKISDFGLARASEKF 186
Query: 217 EESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLT 276
++ + + + GT YM PE + ++T SDIYSFG+V L++++G ++ + + L
Sbjct: 187 AQTVMXSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-LLL 244
Query: 277 RKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332
++ ++ I+D+ D ++N + + E++ +A C+ + RP I V +
Sbjct: 245 DIKEEIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 299
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 148/296 (50%), Gaps = 24/296 (8%)
Query: 53 LYRFSKDEIENAINNDWDRRF------LGRGSAGLVYKGVLPSGQVV-----AIKHIYKS 101
+ FS E++N NN +R +G G G+VYKG + + V A+ I
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 71
Query: 102 NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHL--LRKDSVLT 159
F +E++ +++ +H NLV L G +G + LVY + G+L L L L+
Sbjct: 72 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLS 131
Query: 160 WERRVKILRDCALALRYLH--HYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKML-GM 216
W R KI + A + +LH H+I HRDIK NILL E K+SDFGLA+
Sbjct: 132 WHMRCKIAQGAANGINFLHENHHI-----HRDIKSANILLDEAFTAKISDFGLARASEKF 186
Query: 217 EESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLT 276
++ + + GT YM PE + ++T SDIYSFG+V L++++G ++ + + L
Sbjct: 187 AQTVMXXRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-LLL 244
Query: 277 RKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332
++ ++ I+D+ D ++N + + E++ +A C+ + RP I V +
Sbjct: 245 DIKEEIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 299
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 145/296 (48%), Gaps = 24/296 (8%)
Query: 53 LYRFSKDEIENAINNDWDRRF------LGRGSAGLVYKGVLPSGQVV-----AIKHIYKS 101
+ FS E++N NN +R +G G G+VYKG + + V A+ I
Sbjct: 6 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 65
Query: 102 NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHL--LRKDSVLT 159
F +E++ +++ +H NLV L G +G + LVY + G+L L L L+
Sbjct: 66 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLS 125
Query: 160 WERRVKILRDCALALRYLH--HYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217
W R KI + A + +LH H+I HRDIK NILL E K+SDFGLA+
Sbjct: 126 WHMRCKIAQGAANGINFLHENHHI-----HRDIKSANILLDEAFTAKISDFGLARASEKF 180
Query: 218 ESKVFTD-VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLT 276
V + GT YM PE + ++T SDIYSFG+V L++++G ++ + L
Sbjct: 181 AQXVMXXRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVD-EHREPQLLL 238
Query: 277 RKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332
++ ++ I+D+ D ++N + + E++ +A C+ + RP I V +
Sbjct: 239 DIKEEIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 293
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 144/297 (48%), Gaps = 26/297 (8%)
Query: 53 LYRFSKDEIENAINNDWDRRFL-------GRGSAGLVYKGVLPSGQVV-----AIKHIYK 100
+ FS E++N NN +D R + G G G+VYKG + + V A+ I
Sbjct: 3 FHSFSFYELKNVTNN-FDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITT 61
Query: 101 SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHL--LRKDSVL 158
F +E++ ++ +H NLV L G +G + LVY + G+L L L L
Sbjct: 62 EELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPL 121
Query: 159 TWERRVKILRDCALALRYLH--HYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKML-G 215
+W R KI + A + +LH H+I HRDIK NILL E K+SDFGLA+
Sbjct: 122 SWHXRCKIAQGAANGINFLHENHHI-----HRDIKSANILLDEAFTAKISDFGLARASEK 176
Query: 216 MEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQL 275
+ + + GT Y PE + ++T SDIYSFG+V L++++G ++ + + L
Sbjct: 177 FAQXVXXSRIVGTTAYXAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-LL 234
Query: 276 TRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332
++ ++ I+D+ D + N + + E+ +A C+ + RP I V +
Sbjct: 235 LDIKEEIEDEEKTIEDYIDKKXN-DADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQ 290
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 101/190 (53%), Gaps = 5/190 (2%)
Query: 74 LGRGSAGLVYKGVL-PSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG GS G VYK + +GQ+VAIK + ++ +E+ + + P++V +G +
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKN 96
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKL 192
+ ++V E+C AG+++ + ++ LT + IL+ L YLH +HRDIK
Sbjct: 97 TDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK---IHRDIKA 153
Query: 193 TNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFG 252
NILL + KL+DFG+A L +K V GT +M PE + C +DI+S G
Sbjct: 154 GNILLNTEGHAKLADFGVAGQLTDXMAK-RNXVIGTPFWMAPEVIQEIGYNCVADIWSLG 212
Query: 253 IVALQLLSGQ 262
I A+++ G+
Sbjct: 213 ITAIEMAEGK 222
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 121/255 (47%), Gaps = 19/255 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYK-SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
+G G GLV+ G + VAIK I + S + D F E E + ++ HP LV L+G C+E
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQ 94
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKL 192
LV+EF G L+ +L + + E + + D + YL + C++HRD+
Sbjct: 95 APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAA 151
Query: 193 TNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFG 252
N L+ E K+SDFG+ + + ++ T + + + PE + ++ + SD++SFG
Sbjct: 152 RNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFG 211
Query: 253 IVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKI 312
++ ++ S K+ ++ R + D+S G R K PRL + +I
Sbjct: 212 VLMWEVFSEGKI---PYENRSN-SEVVEDISTGFRLYK----PRLAST-------HVYQI 256
Query: 313 AVLCVAKSSKGRPTI 327
C + + RP
Sbjct: 257 MNHCWKERPEDRPAF 271
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 121/255 (47%), Gaps = 19/255 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYK-SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
+G G GLV+ G + VAIK I + + + + F E E + ++ HP LV L+G C+E
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 72
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKL 192
LV+EF G L+ +L + + E + + D + YL + C++HRD+
Sbjct: 73 APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAA 129
Query: 193 TNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFG 252
N L+ E K+SDFG+ + + ++ T + + + PE + ++ + SD++SFG
Sbjct: 130 RNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFG 189
Query: 253 IVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKI 312
++ ++ S K+ ++ R + D+S G R K PRL + +I
Sbjct: 190 VLMWEVFSEGKI---PYENRSN-SEVVEDISTGFRLYK----PRLAST-------HVYQI 234
Query: 313 AVLCVAKSSKGRPTI 327
C + + RP
Sbjct: 235 MNHCWKERPEDRPAF 249
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 121/255 (47%), Gaps = 19/255 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYK-SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
+G G GLV+ G + VAIK I + + + + F E E + ++ HP LV L+G C+E
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKL 192
LV+EF G L+ +L + + E + + D + YL + C++HRD+
Sbjct: 75 APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAA 131
Query: 193 TNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFG 252
N L+ E K+SDFG+ + + ++ T + + + PE + ++ + SD++SFG
Sbjct: 132 RNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFG 191
Query: 253 IVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKI 312
++ ++ S K+ ++ R + D+S G R K PRL + +I
Sbjct: 192 VLMWEVFSEGKI---PYENRSN-SEVVEDISTGFRLYK----PRLAST-------HVYQI 236
Query: 313 AVLCVAKSSKGRPTI 327
C + + RP
Sbjct: 237 MNHCWKERPEDRPAF 251
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 113/225 (50%), Gaps = 12/225 (5%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYK-SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
+G G GLV+ G + VAIK I + + + + F E E + ++ HP LV L+G C+E
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 77
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKL 192
LV+EF G L+ +L + + E + + D + YL + C++HRD+
Sbjct: 78 APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAA 134
Query: 193 TNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFG 252
N L+ E K+SDFG+ + + ++ T + + + PE + ++ + SD++SFG
Sbjct: 135 RNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFG 194
Query: 253 IVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRL 297
++ ++ S K+ ++ R + D+S G R K PRL
Sbjct: 195 VLMWEVFSEGKI---PYENRSN-SEVVEDISTGFRLYK----PRL 231
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 120/255 (47%), Gaps = 19/255 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYK-SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
+G G GLV+ G + VAIK I + + + + F E E + ++ HP LV L+G C+E
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 75
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKL 192
LV EF G L+ +L + + E + + D + YL + C++HRD+
Sbjct: 76 APICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAA 132
Query: 193 TNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFG 252
N L+ E K+SDFG+ + + ++ T + + + PE + ++ + SD++SFG
Sbjct: 133 RNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFG 192
Query: 253 IVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKI 312
++ ++ S K+ ++ R + D+S G R K PRL + +I
Sbjct: 193 VLMWEVFSEGKI---PYENRSN-SEVVEDISTGFRLYK----PRLAST-------HVYQI 237
Query: 313 AVLCVAKSSKGRPTI 327
C + + RP
Sbjct: 238 MNHCWRERPEDRPAF 252
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 120/255 (47%), Gaps = 19/255 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYK-SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
+G G GLV+ G + VAIK I + + + + F E E + ++ HP LV L+G C+E
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKL 192
LV+EF G L+ +L + + E + + D + YL + ++HRD+
Sbjct: 75 APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EASVIHRDLAA 131
Query: 193 TNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFG 252
N L+ E K+SDFG+ + + ++ T + + + PE + ++ + SD++SFG
Sbjct: 132 RNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFG 191
Query: 253 IVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKI 312
++ ++ S K+ ++ R + D+S G R K PRL + +I
Sbjct: 192 VLMWEVFSEGKI---PYENRSN-SEVVEDISTGFRLYK----PRLAST-------HVYQI 236
Query: 313 AVLCVAKSSKGRPTI 327
C + + RP
Sbjct: 237 MNHCWKERPEDRPAF 251
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 113/231 (48%), Gaps = 24/231 (10%)
Query: 72 RFLGRGS-AGLVYKGVLPSGQVVAIK-----HIYKSNNTDSFSREVEGLSRVRHPNLVCL 125
+ LG GS + +V L + + AIK HI K N +RE + +SR+ HP V L
Sbjct: 43 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 102
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+ C + + Y + G L +++ + S R + AL YLH I
Sbjct: 103 YFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH---GKGI 158
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAKLTC 244
+HRD+K NILL E + +++DFG AK+L E + + GT Y+ PE +T
Sbjct: 159 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 218
Query: 245 ASDIYSFGIVALQLLSG-------------QKVIELDFDARDQLTRKARDV 282
+SD+++ G + QL++G QK+I+L++D ++ KARD+
Sbjct: 219 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDL 269
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 108/226 (47%), Gaps = 15/226 (6%)
Query: 44 EIYSTTWSGLYRFSKDEIENAINNDWDRRFLGRGSAGLVYKG--VLPSGQ--VVAIKHI- 98
E Y +++F+K+ + I + R +G G G V G LP + VAIK +
Sbjct: 24 ETYEDPNRAVHQFAKELDASCIKIE---RVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLK 80
Query: 99 --YKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDS 156
Y F E + + HPN+V L G G +V EF G L L + D
Sbjct: 81 VGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDG 140
Query: 157 VLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM 216
T + V +LR A +RYL D VHRD+ NIL+ L K+SDFGL++++
Sbjct: 141 QFTVIQLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIED 197
Query: 217 EESKVFTDVRGTIG--YMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
+ V+T G I + PE + K T ASD++S+GIV +++S
Sbjct: 198 DPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 105/200 (52%), Gaps = 17/200 (8%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHI----YKSNNTDSFSREVEGLSRVRHPNLVCLFGCC 129
+G GS G V++ G VA+K + + + + F REV + R+RHPN+V G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 130 VEGGEQYLVYEFCAAGNLAQHLLRKDSV---LTWERRVKILRDCALALRYLHHYIDGCIV 186
+ +V E+ + G+L + LL K L RR+ + D A + YLH+ + IV
Sbjct: 104 TQPPNLSIVTEYLSRGSLYR-LLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIV 161
Query: 187 HRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVR---GTIGYMDPEYMTNAKLT 243
HRD+K N+L+ +K K+ DFGL+++ ++ F + GT +M PE + +
Sbjct: 162 HRDLKSPNLLVDKKYTVKVCDFGLSRL----KASXFLXSKXAAGTPEWMAPEVLRDEPSN 217
Query: 244 CASDIYSFGIVALQLLSGQK 263
SD+YSFG++ +L + Q+
Sbjct: 218 EKSDVYSFGVILWELATLQQ 237
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 111/229 (48%), Gaps = 23/229 (10%)
Query: 73 FLGRGSAGLVYKG-VLPSGQVVAIKHI-----YKSNNTDSFSREVEGLSRVRHPNLVCLF 126
LG+GS VY+ + +G VAIK I YK+ EV+ +++HP+++ L+
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 127 GCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIV 186
+ YLV E C G + ++L + + + + YLH + I+
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH---GIL 134
Query: 187 HRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCAS 246
HRD+ L+N+LLT + K++DFGLA L M K +T + GT Y+ PE T + S
Sbjct: 135 HRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-LCGTPNYISPEIATRSAHGLES 193
Query: 247 DIYSFGIVALQLLSGQ-------------KVIELDFDARDQLTRKARDV 282
D++S G + LL G+ KV+ D++ L+ +A+D+
Sbjct: 194 DVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDL 242
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 105/200 (52%), Gaps = 17/200 (8%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHI----YKSNNTDSFSREVEGLSRVRHPNLVCLFGCC 129
+G GS G V++ G VA+K + + + + F REV + R+RHPN+V G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 130 VEGGEQYLVYEFCAAGNLAQHLLRKDSV---LTWERRVKILRDCALALRYLHHYIDGCIV 186
+ +V E+ + G+L + LL K L RR+ + D A + YLH+ + IV
Sbjct: 104 TQPPNLSIVTEYLSRGSLYR-LLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIV 161
Query: 187 HRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVR---GTIGYMDPEYMTNAKLT 243
HR++K N+L+ +K K+ DFGL+++ ++ F + GT +M PE + +
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRL----KASTFLSSKSAAGTPEWMAPEVLRDEPSN 217
Query: 244 CASDIYSFGIVALQLLSGQK 263
SD+YSFG++ +L + Q+
Sbjct: 218 EKSDVYSFGVILWELATLQQ 237
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 105/210 (50%), Gaps = 15/210 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNT----DSFSREVEGLSRVRHPNLVCLFGCC 129
+G GS G VYKG VA+K + + T +F EV L + RH N++ G
Sbjct: 20 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 130 VEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRD 189
+ + +V ++C +L HL ++ ++ + I R A + YLH I+HRD
Sbjct: 78 TKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRD 133
Query: 190 IKLTNILLTEKLEPKLSDFGLAKMLG-MEESKVFTDVRGTIGYMDPEYM---TNAKLTCA 245
+K NI L E K+ DFGLA + S F + G+I +M PE + + +
Sbjct: 134 LKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 193
Query: 246 SDIYSFGIVALQLLSGQKVIELDFDARDQL 275
SD+Y+FGIV +L++GQ + + + RDQ+
Sbjct: 194 SDVYAFGIVLYELMTGQ-LPYSNINNRDQI 222
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 112/231 (48%), Gaps = 24/231 (10%)
Query: 72 RFLGRGS-AGLVYKGVLPSGQVVAIK-----HIYKSNNTDSFSREVEGLSRVRHPNLVCL 125
+ LG GS + +V L + + AIK HI K N +RE + +SR+ HP V L
Sbjct: 16 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 75
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+ + + Y + G L +++ + S R + AL YLH I
Sbjct: 76 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH---GKGI 131
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAKLTC 244
+HRD+K NILL E + +++DFG AK+L E + + GT Y+ PE +T
Sbjct: 132 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 191
Query: 245 ASDIYSFGIVALQLLSG-------------QKVIELDFDARDQLTRKARDV 282
+SD+++ G + QL++G QK+I+L++D ++ KARD+
Sbjct: 192 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDL 242
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 112/231 (48%), Gaps = 24/231 (10%)
Query: 72 RFLGRGS-AGLVYKGVLPSGQVVAIK-----HIYKSNNTDSFSREVEGLSRVRHPNLVCL 125
+ LG GS + +V L + + AIK HI K N +RE + +SR+ HP V L
Sbjct: 15 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 74
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+ + + Y + G L +++ + S R + AL YLH I
Sbjct: 75 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH---GKGI 130
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAKLTC 244
+HRD+K NILL E + +++DFG AK+L E + + GT Y+ PE +T
Sbjct: 131 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 190
Query: 245 ASDIYSFGIVALQLLSG-------------QKVIELDFDARDQLTRKARDV 282
+SD+++ G + QL++G QK+I+L++D ++ KARD+
Sbjct: 191 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDL 241
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 112/231 (48%), Gaps = 24/231 (10%)
Query: 72 RFLGRGS-AGLVYKGVLPSGQVVAIK-----HIYKSNNTDSFSREVEGLSRVRHPNLVCL 125
+ LG GS + +V L + + AIK HI K N +RE + +SR+ HP V L
Sbjct: 13 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 72
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+ + + Y + G L +++ + S R + AL YLH I
Sbjct: 73 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH---GKGI 128
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAKLTC 244
+HRD+K NILL E + +++DFG AK+L E + + GT Y+ PE +T
Sbjct: 129 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 188
Query: 245 ASDIYSFGIVALQLLSG-------------QKVIELDFDARDQLTRKARDV 282
+SD+++ G + QL++G QK+I+L++D ++ KARD+
Sbjct: 189 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDL 239
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 112/231 (48%), Gaps = 24/231 (10%)
Query: 72 RFLGRGS-AGLVYKGVLPSGQVVAIK-----HIYKSNNTDSFSREVEGLSRVRHPNLVCL 125
+ LG GS + +V L + + AIK HI K N +RE + +SR+ HP V L
Sbjct: 14 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 73
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+ + + Y + G L +++ + S R + AL YLH I
Sbjct: 74 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH---GKGI 129
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAKLTC 244
+HRD+K NILL E + +++DFG AK+L E + + GT Y+ PE +T
Sbjct: 130 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 189
Query: 245 ASDIYSFGIVALQLLSG-------------QKVIELDFDARDQLTRKARDV 282
+SD+++ G + QL++G QK+I+L++D ++ KARD+
Sbjct: 190 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDL 240
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 103/210 (49%), Gaps = 15/210 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNT----DSFSREVEGLSRVRHPNLVCLFGCC 129
+G GS G VYKG VA+K + + T +F EV L + RH N++ G
Sbjct: 18 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 130 VEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRD 189
+ + +V ++C +L HL ++ + + I R A + YLH I+HRD
Sbjct: 76 TKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 131
Query: 190 IKLTNILLTEKLEPKLSDFGLAKMLG-MEESKVFTDVRGTIGYMDPEYM---TNAKLTCA 245
+K NI L E L K+ DFGLA + S F + G+I +M PE + +
Sbjct: 132 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 191
Query: 246 SDIYSFGIVALQLLSGQKVIELDFDARDQL 275
SD+Y+FGIV +L++GQ + + RDQ+
Sbjct: 192 SDVYAFGIVLYELMTGQLPYS-NINNRDQI 220
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 104/210 (49%), Gaps = 15/210 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNT----DSFSREVEGLSRVRHPNLVCLFGCC 129
+G GS G VYKG VA+K + + T +F EV L + RH N++ G
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 130 VEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRD 189
+ + +V ++C +L HL ++ + + I R A + YLH I+HRD
Sbjct: 79 TKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 134
Query: 190 IKLTNILLTEKLEPKLSDFGLAKMLG-MEESKVFTDVRGTIGYMDPEYM---TNAKLTCA 245
+K NI L E L K+ DFGLA + S F + G+I +M PE + +
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 194
Query: 246 SDIYSFGIVALQLLSGQKVIELDFDARDQL 275
SD+Y+FGIV +L++GQ + + + RDQ+
Sbjct: 195 SDVYAFGIVLYELMTGQ-LPYSNINNRDQI 223
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 112/231 (48%), Gaps = 24/231 (10%)
Query: 72 RFLGRGS-AGLVYKGVLPSGQVVAIK-----HIYKSNNTDSFSREVEGLSRVRHPNLVCL 125
+ LG GS + +V L + + AIK HI K N +RE + +SR+ HP V L
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+ + + Y + G L +++ + S R + AL YLH I
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH---GKGI 151
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVR-GTIGYMDPEYMTNAKLTC 244
+HRD+K NILL E + +++DFG AK+L E + + GT Y+ PE +T
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACK 211
Query: 245 ASDIYSFGIVALQLLSG-------------QKVIELDFDARDQLTRKARDV 282
+SD+++ G + QL++G QK+I+L++D ++ KARD+
Sbjct: 212 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDL 262
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 103/210 (49%), Gaps = 15/210 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNT----DSFSREVEGLSRVRHPNLVCLFGCC 129
+G GS G VYKG VA+K + + T +F EV L + RH N++ G
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 130 VEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRD 189
+ + +V ++C +L HL ++ + + I R A + YLH I+HRD
Sbjct: 74 TKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 129
Query: 190 IKLTNILLTEKLEPKLSDFGLAKMLG-MEESKVFTDVRGTIGYMDPEYM---TNAKLTCA 245
+K NI L E L K+ DFGLA + S F + G+I +M PE + +
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 246 SDIYSFGIVALQLLSGQKVIELDFDARDQL 275
SD+Y+FGIV +L++GQ + + RDQ+
Sbjct: 190 SDVYAFGIVLYELMTGQLPYS-NINNRDQI 218
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 102/210 (48%), Gaps = 15/210 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNT----DSFSREVEGLSRVRHPNLVCLFGCC 129
+G GS G VYKG VA+K + + T +F EV L + RH N++ G
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 130 VEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRD 189
+ +V ++C +L HL ++ + + I R A + YLH I+HRD
Sbjct: 74 T-APQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 129
Query: 190 IKLTNILLTEKLEPKLSDFGLAKMLG-MEESKVFTDVRGTIGYMDPEYM---TNAKLTCA 245
+K NI L E L K+ DFGLA + S F + G+I +M PE + +
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 246 SDIYSFGIVALQLLSGQKVIELDFDARDQL 275
SD+Y+FGIV +L++GQ + + RDQ+
Sbjct: 190 SDVYAFGIVLYELMTGQLPYS-NINNRDQI 218
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 104/210 (49%), Gaps = 15/210 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNT----DSFSREVEGLSRVRHPNLVCLFGCC 129
+G GS G VYKG VA+K + + T +F EV L + RH N++ G
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 130 VEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRD 189
+ + +V ++C +L HL ++ + + I R A + YLH I+HRD
Sbjct: 79 TKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 134
Query: 190 IKLTNILLTEKLEPKLSDFGLAKMLG-MEESKVFTDVRGTIGYMDPEYM---TNAKLTCA 245
+K NI L E L K+ DFGLA + S F + G+I +M PE + +
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 194
Query: 246 SDIYSFGIVALQLLSGQKVIELDFDARDQL 275
SD+Y+FGIV +L++GQ + + + RDQ+
Sbjct: 195 SDVYAFGIVLYELMTGQ-LPYSNINNRDQI 223
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 104/210 (49%), Gaps = 15/210 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNT----DSFSREVEGLSRVRHPNLVCLFGCC 129
+G GS G VYKG VA+K + + T +F EV L + RH N++ G
Sbjct: 43 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 130 VEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRD 189
+ + +V ++C +L HL ++ + + I R A + YLH I+HRD
Sbjct: 101 TKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 156
Query: 190 IKLTNILLTEKLEPKLSDFGLAKMLG-MEESKVFTDVRGTIGYMDPEYM---TNAKLTCA 245
+K NI L E L K+ DFGLA + S F + G+I +M PE + +
Sbjct: 157 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 216
Query: 246 SDIYSFGIVALQLLSGQKVIELDFDARDQL 275
SD+Y+FGIV +L++GQ + + + RDQ+
Sbjct: 217 SDVYAFGIVLYELMTGQ-LPYSNINNRDQI 245
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 112/231 (48%), Gaps = 24/231 (10%)
Query: 72 RFLGRGS-AGLVYKGVLPSGQVVAIK-----HIYKSNNTDSFSREVEGLSRVRHPNLVCL 125
+ LG GS + +V L + + AIK HI K N +RE + +SR+ HP V L
Sbjct: 20 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 79
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+ + + Y + G L +++ + S R + AL YLH I
Sbjct: 80 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH---GKGI 135
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAKLTC 244
+HRD+K NILL E + +++DFG AK+L E + + GT Y+ PE +T
Sbjct: 136 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 195
Query: 245 ASDIYSFGIVALQLLSG-------------QKVIELDFDARDQLTRKARDV 282
+SD+++ G + QL++G QK+I+L++D ++ KARD+
Sbjct: 196 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDL 246
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 104/210 (49%), Gaps = 15/210 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNT----DSFSREVEGLSRVRHPNLVCLFGCC 129
+G GS G VYKG VA+K + + T +F EV L + RH N++ G
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 130 VEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRD 189
+ + +V ++C +L HL ++ + + I R A + YLH I+HRD
Sbjct: 102 TKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 157
Query: 190 IKLTNILLTEKLEPKLSDFGLAKMLG-MEESKVFTDVRGTIGYMDPEYM---TNAKLTCA 245
+K NI L E L K+ DFGLA + S F + G+I +M PE + +
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 217
Query: 246 SDIYSFGIVALQLLSGQKVIELDFDARDQL 275
SD+Y+FGIV +L++GQ + + + RDQ+
Sbjct: 218 SDVYAFGIVLYELMTGQ-LPYSNINNRDQI 246
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 112/231 (48%), Gaps = 24/231 (10%)
Query: 72 RFLGRGS-AGLVYKGVLPSGQVVAIK-----HIYKSNNTDSFSREVEGLSRVRHPNLVCL 125
+ LG GS + +V L + + AIK HI K N +RE + +SR+ HP V L
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+ + + Y + G L +++ + S R + AL YLH I
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH---GKGI 151
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAKLTC 244
+HRD+K NILL E + +++DFG AK+L E + + GT Y+ PE +T
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 211
Query: 245 ASDIYSFGIVALQLLSG-------------QKVIELDFDARDQLTRKARDV 282
+SD+++ G + QL++G QK+I+L++D ++ KARD+
Sbjct: 212 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDL 262
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 104/210 (49%), Gaps = 15/210 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNT----DSFSREVEGLSRVRHPNLVCLFGCC 129
+G GS G VYKG VA+K + + T +F EV L + RH N++ G
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 130 VEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRD 189
+ + +V ++C +L HL ++ ++ + I R A + YLH I+HRD
Sbjct: 90 TKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRD 145
Query: 190 IKLTNILLTEKLEPKLSDFGLAKMLG-MEESKVFTDVRGTIGYMDPEYM---TNAKLTCA 245
+K NI L E K+ DFGLA S F + G+I +M PE + + +
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 246 SDIYSFGIVALQLLSGQKVIELDFDARDQL 275
SD+Y+FGIV +L++GQ + + + RDQ+
Sbjct: 206 SDVYAFGIVLYELMTGQ-LPYSNINNRDQI 234
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 112/231 (48%), Gaps = 24/231 (10%)
Query: 72 RFLGRGS-AGLVYKGVLPSGQVVAIK-----HIYKSNNTDSFSREVEGLSRVRHPNLVCL 125
+ LG GS + +V L + + AIK HI K N +RE + +SR+ HP V L
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+ + + Y + G L +++ + S R + AL YLH I
Sbjct: 95 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH---GKGI 150
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAKLTC 244
+HRD+K NILL E + +++DFG AK+L E + + GT Y+ PE +T
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 210
Query: 245 ASDIYSFGIVALQLLSG-------------QKVIELDFDARDQLTRKARDV 282
+SD+++ G + QL++G QK+I+L++D ++ KARD+
Sbjct: 211 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDL 261
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 112/231 (48%), Gaps = 24/231 (10%)
Query: 72 RFLGRGS-AGLVYKGVLPSGQVVAIK-----HIYKSNNTDSFSREVEGLSRVRHPNLVCL 125
+ LG GS + +V L + + AIK HI K N +RE + +SR+ HP V L
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+ + + Y + G L +++ + S R + AL YLH I
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH---GKGI 151
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAKLTC 244
+HRD+K NILL E + +++DFG AK+L E + + GT Y+ PE +T
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 211
Query: 245 ASDIYSFGIVALQLLSG-------------QKVIELDFDARDQLTRKARDV 282
+SD+++ G + QL++G QK+I+L++D ++ KARD+
Sbjct: 212 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDL 262
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 112/231 (48%), Gaps = 24/231 (10%)
Query: 72 RFLGRGS-AGLVYKGVLPSGQVVAIK-----HIYKSNNTDSFSREVEGLSRVRHPNLVCL 125
+ LG GS + +V L + + AIK HI K N +RE + +SR+ HP V L
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+ + + Y + G L +++ + S R + AL YLH I
Sbjct: 95 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH---GKGI 150
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAKLTC 244
+HRD+K NILL E + +++DFG AK+L E + + GT Y+ PE +T
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACK 210
Query: 245 ASDIYSFGIVALQLLSG-------------QKVIELDFDARDQLTRKARDV 282
+SD+++ G + QL++G QK+I+L++D ++ KARD+
Sbjct: 211 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDL 261
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 112/231 (48%), Gaps = 24/231 (10%)
Query: 72 RFLGRGS-AGLVYKGVLPSGQVVAIK-----HIYKSNNTDSFSREVEGLSRVRHPNLVCL 125
+ LG GS + +V L + + AIK HI K N +RE + +SR+ HP V L
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+ + + Y + G L +++ + S R + AL YLH I
Sbjct: 99 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH---GKGI 154
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAKLTC 244
+HRD+K NILL E + +++DFG AK+L E + + GT Y+ PE +T
Sbjct: 155 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 214
Query: 245 ASDIYSFGIVALQLLSG-------------QKVIELDFDARDQLTRKARDV 282
+SD+++ G + QL++G QK+I+L++D ++ KARD+
Sbjct: 215 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDL 265
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 112/231 (48%), Gaps = 24/231 (10%)
Query: 72 RFLGRGS-AGLVYKGVLPSGQVVAIK-----HIYKSNNTDSFSREVEGLSRVRHPNLVCL 125
+ LG GS + +V L + + AIK HI K N +RE + +SR+ HP V L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+ + + Y + G L +++ + S R + AL YLH I
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH---GKGI 153
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAKLTC 244
+HRD+K NILL E + +++DFG AK+L E + + GT Y+ PE +T
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 213
Query: 245 ASDIYSFGIVALQLLSG-------------QKVIELDFDARDQLTRKARDV 282
+SD+++ G + QL++G QK+I+L++D ++ KARD+
Sbjct: 214 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDL 264
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 103/210 (49%), Gaps = 15/210 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNT----DSFSREVEGLSRVRHPNLVCLFGCC 129
+G GS G VYKG VA+K + + T +F EV L + RH N++ G
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 130 VEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRD 189
+ +V ++C +L HL ++ ++ + I R A + YLH I+HRD
Sbjct: 90 T-APQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRD 145
Query: 190 IKLTNILLTEKLEPKLSDFGLAKMLG-MEESKVFTDVRGTIGYMDPEYM---TNAKLTCA 245
+K NI L E K+ DFGLA S F + G+I +M PE + + +
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 246 SDIYSFGIVALQLLSGQKVIELDFDARDQL 275
SD+Y+FGIV +L++GQ + + + RDQ+
Sbjct: 206 SDVYAFGIVLYELMTGQ-LPYSNINNRDQI 234
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 112/231 (48%), Gaps = 24/231 (10%)
Query: 72 RFLGRGS-AGLVYKGVLPSGQVVAIK-----HIYKSNNTDSFSREVEGLSRVRHPNLVCL 125
+ LG GS + +V L + + AIK HI K N +RE + +SR+ HP V L
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+ + + Y + G L +++ + S R + AL YLH I
Sbjct: 99 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH---GKGI 154
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAKLTC 244
+HRD+K NILL E + +++DFG AK+L E + + GT Y+ PE +T
Sbjct: 155 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACK 214
Query: 245 ASDIYSFGIVALQLLSG-------------QKVIELDFDARDQLTRKARDV 282
+SD+++ G + QL++G QK+I+L++D ++ KARD+
Sbjct: 215 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDL 265
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 112/231 (48%), Gaps = 24/231 (10%)
Query: 72 RFLGRGS-AGLVYKGVLPSGQVVAIK-----HIYKSNNTDSFSREVEGLSRVRHPNLVCL 125
+ LG GS + +V L + + AIK HI K N +RE + +SR+ HP V L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+ + + Y + G L +++ + S R + AL YLH I
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH---GKGI 153
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAKLTC 244
+HRD+K NILL E + +++DFG AK+L E + + GT Y+ PE +T
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 213
Query: 245 ASDIYSFGIVALQLLSG-------------QKVIELDFDARDQLTRKARDV 282
+SD+++ G + QL++G QK+I+L++D ++ KARD+
Sbjct: 214 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDL 264
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 113/231 (48%), Gaps = 24/231 (10%)
Query: 72 RFLGRGS-AGLVYKGVLPSGQVVAIK-----HIYKSNNTDSFSREVEGLSRVRHPNLVCL 125
+ LG GS + +V L + + AIK HI K N +RE + +SR+ HP V L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+ + + Y + G L +++ + S R + AL YLH I
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRF-YTAEIVSALEYLH---GKGI 153
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAKLTC 244
+HRD+K NILL E + +++DFG AK+L E + + GT Y+ PE +T +
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASK 213
Query: 245 ASDIYSFGIVALQLLSG-------------QKVIELDFDARDQLTRKARDV 282
+SD+++ G + QL++G QK+I+L++D ++ KARD+
Sbjct: 214 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDL 264
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 112/231 (48%), Gaps = 24/231 (10%)
Query: 72 RFLGRGS-AGLVYKGVLPSGQVVAIK-----HIYKSNNTDSFSREVEGLSRVRHPNLVCL 125
+ LG GS + +V L + + AIK HI K N +RE + +SR+ HP V L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+ + + Y + G L +++ + S R + AL YLH I
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH---GKGI 153
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAKLTC 244
+HRD+K NILL E + +++DFG AK+L E + + GT Y+ PE +T
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 213
Query: 245 ASDIYSFGIVALQLLSG-------------QKVIELDFDARDQLTRKARDV 282
+SD+++ G + QL++G QK+I+L++D ++ KARD+
Sbjct: 214 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDL 264
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 111/231 (48%), Gaps = 24/231 (10%)
Query: 72 RFLGRGS-AGLVYKGVLPSGQVVAIK-----HIYKSNNTDSFSREVEGLSRVRHPNLVCL 125
+ LG GS + V L + + AIK HI K N +RE + +SR+ HP V L
Sbjct: 36 KILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+ + + Y + G L +++ + S R + AL YLH I
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH---GKGI 151
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAKLTC 244
+HRD+K NILL E + +++DFG AK+L E + + GT Y+ PE +T
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 211
Query: 245 ASDIYSFGIVALQLLSG-------------QKVIELDFDARDQLTRKARDV 282
+SD+++ G + QL++G QK+I+L++D ++ KARD+
Sbjct: 212 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDL 262
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 103/210 (49%), Gaps = 15/210 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNT----DSFSREVEGLSRVRHPNLVCLFGCC 129
+G GS G VYKG VA+K + + T +F EV L + RH N++ G
Sbjct: 36 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 130 VEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRD 189
+ + +V ++C +L HL ++ + + I R A + YLH I+HRD
Sbjct: 94 TKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 149
Query: 190 IKLTNILLTEKLEPKLSDFGLAKMLG-MEESKVFTDVRGTIGYMDPEYM---TNAKLTCA 245
+K NI L E L K+ DFGLA S F + G+I +M PE + +
Sbjct: 150 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 209
Query: 246 SDIYSFGIVALQLLSGQKVIELDFDARDQL 275
SD+Y+FGIV +L++GQ + + + RDQ+
Sbjct: 210 SDVYAFGIVLYELMTGQ-LPYSNINNRDQI 238
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 102/210 (48%), Gaps = 15/210 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNT----DSFSREVEGLSRVRHPNLVCLFGCC 129
+G GS G VYKG VA+K + + T +F EV L + RH N++ G
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 130 VEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRD 189
+ + +V ++C +L HL ++ + + I R A + YLH I+HRD
Sbjct: 74 TKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 129
Query: 190 IKLTNILLTEKLEPKLSDFGLAKMLG-MEESKVFTDVRGTIGYMDPEYM---TNAKLTCA 245
+K NI L E L K+ DFGLA S F + G+I +M PE + +
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 246 SDIYSFGIVALQLLSGQKVIELDFDARDQL 275
SD+Y+FGIV +L++GQ + + RDQ+
Sbjct: 190 SDVYAFGIVLYELMTGQLPYS-NINNRDQI 218
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 103/210 (49%), Gaps = 15/210 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNT----DSFSREVEGLSRVRHPNLVCLFGCC 129
+G GS G VYKG VA+K + + T +F EV L + RH N++ G
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 130 VEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRD 189
+ + +V ++C +L HL ++ + + I R A + YLH I+HRD
Sbjct: 102 TKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 157
Query: 190 IKLTNILLTEKLEPKLSDFGLAKMLG-MEESKVFTDVRGTIGYMDPEYM---TNAKLTCA 245
+K NI L E L K+ DFGLA S F + G+I +M PE + +
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 217
Query: 246 SDIYSFGIVALQLLSGQKVIELDFDARDQL 275
SD+Y+FGIV +L++GQ + + + RDQ+
Sbjct: 218 SDVYAFGIVLYELMTGQ-LPYSNINNRDQI 246
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 103/192 (53%), Gaps = 9/192 (4%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIK--HIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCV 130
+G+G++G VY + + +GQ VAI+ ++ + + E+ + ++PN+V +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 131 EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDI 190
G E ++V E+ A G+L + ++ + + + R+C AL +LH ++HRDI
Sbjct: 88 VGDELWVVMEYLAGGSLTD--VVTETCMDEGQIAAVCRECLQALEFLH---SNQVIHRDI 142
Query: 191 KLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYS 250
K NILL KL+DFG + E+SK T V GT +M PE +T DI+S
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDIWS 201
Query: 251 FGIVALQLLSGQ 262
GI+A++++ G+
Sbjct: 202 LGIMAIEMIEGE 213
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 107/217 (49%), Gaps = 15/217 (6%)
Query: 53 LYRFSKDEIENAINNDWDRRFLGRGSAGLVYKG--VLPSGQ--VVAIKHI---YKSNNTD 105
++ F+K+ I+ D + +G G G V G LPS + VAIK + Y
Sbjct: 35 VHEFAKELDATNISID---KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR 91
Query: 106 SFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVK 165
F E + + HPN++ L G + +V E+ G+L L + D+ T + V
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG 151
Query: 166 ILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDV 225
+LR A ++YL D VHRD+ NIL+ L K+SDFGLA++L + +T
Sbjct: 152 MLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTR 208
Query: 226 RGTIG--YMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
G I + PE + K T ASD++S+GIV +++S
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 136/304 (44%), Gaps = 40/304 (13%)
Query: 52 GLYRFSKDEIENAINNDWD-RRFLGRGSAGLVYKG-VLPSGQVVAIKHIYKSNNT----- 104
G F K + +N+ + + +G+G GLV+KG ++ VVAIK + ++
Sbjct: 4 GGSEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM 63
Query: 105 ----DSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTW 160
F REV +S + HPN+V L+G +V EF G+L LL K + W
Sbjct: 64 IEKFQEFQREVFIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPIKW 121
Query: 161 ERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLE-----PKLSDFGLAKMLG 215
+++++ D AL + Y+ + + IVHRD++ NI L E K++DFGL++
Sbjct: 122 SVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ--- 177
Query: 216 MEESKVFTDVRGTIGYMDPEYM--TNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARD 273
+ + + G +M PE + T +D YSF ++ +L+G+ + +
Sbjct: 178 -QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI 236
Query: 274 QLTRKARDVSMGKRP-IKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332
+ R+ G RP I + PRL I LC + K RP + +
Sbjct: 237 KFINMIRE--EGLRPTIPEDCPPRLRNVIE------------LCWSGDPKKRPHFSYIVK 282
Query: 333 EIDK 336
E+ +
Sbjct: 283 ELSE 286
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 122/271 (45%), Gaps = 27/271 (9%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSN--NTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
+G GS G VYKG V I + +F EV L + RH N++ G +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK 103
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIK 191
+V ++C +L +HL +++ + + I R A + YLH I+HRD+K
Sbjct: 104 DNLA-IVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMK 159
Query: 192 LTNILLTEKLEPKLSDFGLAKMLG-MEESKVFTDVRGTIGYMDPEYM---TNAKLTCASD 247
NI L E L K+ DFGLA + S+ G++ +M PE + N + SD
Sbjct: 160 SNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSD 219
Query: 248 IYSFGIVALQLLSGQKVIELDF---DARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRA 304
+YS+GIV +L++G EL + + RDQ+ + M R + +L N +A
Sbjct: 220 VYSYGIVLYELMTG----ELPYSHINNRDQI------IFMVGRGYASPDLSKLYKNCPKA 269
Query: 305 DFESILKIAVLCVAKSSKGRPTIDVVYEEID 335
+ ++ CV K + RP + I+
Sbjct: 270 ----MKRLVADCVKKVKEERPLFPQILSSIE 296
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 15/217 (6%)
Query: 53 LYRFSKDEIENAINNDWDRRFLGRGSAGLVYKG--VLPSGQ--VVAIKHI---YKSNNTD 105
++ F+K+ I+ D + +G G G V G LPS + VAIK + Y
Sbjct: 35 VHEFAKELDATNISID---KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR 91
Query: 106 SFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVK 165
F E + + HPN++ L G + +V E+ G+L L + D+ T + V
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG 151
Query: 166 ILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDV 225
+LR A ++YL D VHRD+ NIL+ L K+SDFGL+++L + +T
Sbjct: 152 MLRGIASGMKYLS---DMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 226 RGTIG--YMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
G I + PE + K T ASD++S+GIV +++S
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 104/192 (54%), Gaps = 9/192 (4%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIK--HIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCV 130
+G+G++G VY + + +GQ VAI+ ++ + + E+ + ++PN+V +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 131 EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDI 190
G E ++V E+ A G+L + ++ + + + R+C AL +LH ++HRDI
Sbjct: 88 VGDELWVVMEYLAGGSLTD--VVTETCMDEGQIAAVCRECLQALEFLH---SNQVIHRDI 142
Query: 191 KLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYS 250
K NILL KL+DFG + E+SK +++ GT +M PE +T DI+S
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSEMVGTPYWMAPEVVTRKAYGPKVDIWS 201
Query: 251 FGIVALQLLSGQ 262
GI+A++++ G+
Sbjct: 202 LGIMAIEMIEGE 213
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 111/231 (48%), Gaps = 24/231 (10%)
Query: 72 RFLGRGS-AGLVYKGVLPSGQVVAIK-----HIYKSNNTDSFSREVEGLSRVRHPNLVCL 125
+ LG GS + +V L + + AIK HI K N +RE + +SR+ HP V L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+ + + Y + G L +++ + S R + AL YLH I
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH---GKGI 153
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAKLTC 244
+HRD+K NILL E + +++DFG AK+L E + + GT Y+ PE +T
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXK 213
Query: 245 ASDIYSFGIVALQLLSG-------------QKVIELDFDARDQLTRKARDV 282
+SD+++ G + QL++G K+I+L++D ++ KARD+
Sbjct: 214 SSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDL 264
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 15/217 (6%)
Query: 53 LYRFSKDEIENAINNDWDRRFLGRGSAGLVYKG--VLPSGQ--VVAIKHI---YKSNNTD 105
++ F+K+ I+ D + +G G G V G LPS + VAIK + Y
Sbjct: 6 VHEFAKELDATNISID---KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR 62
Query: 106 SFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVK 165
F E + + HPN++ L G + +V E+ G+L L + D+ T + V
Sbjct: 63 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG 122
Query: 166 ILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDV 225
+LR A ++YL D VHRD+ NIL+ L K+SDFGL+++L + +T
Sbjct: 123 MLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
Query: 226 RGTIG--YMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
G I + PE + K T ASD++S+GIV +++S
Sbjct: 180 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 15/217 (6%)
Query: 53 LYRFSKDEIENAINNDWDRRFLGRGSAGLVYKG--VLPSGQ--VVAIKHI---YKSNNTD 105
++ F+K+ I+ D + +G G G V G LPS + VAIK + Y
Sbjct: 23 VHEFAKELDATNISID---KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR 79
Query: 106 SFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVK 165
F E + + HPN++ L G + +V E+ G+L L + D+ T + V
Sbjct: 80 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG 139
Query: 166 ILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDV 225
+LR A ++YL D VHRD+ NIL+ L K+SDFGL+++L + +T
Sbjct: 140 MLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 196
Query: 226 RGTIG--YMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
G I + PE + K T ASD++S+GIV +++S
Sbjct: 197 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 110/231 (47%), Gaps = 24/231 (10%)
Query: 72 RFLGRGS-AGLVYKGVLPSGQVVAIK-----HIYKSNNTDSFSREVEGLSRVRHPNLVCL 125
+ LG GS + +V L + + AIK HI K N +RE + +SR+ HP V L
Sbjct: 41 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 100
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+ + + Y + G L +++ + S R + AL YLH I
Sbjct: 101 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH---GKGI 156
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAKLTC 244
+HRD+K NILL E + +++DFG AK+L E + + GT Y+ PE +T
Sbjct: 157 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 216
Query: 245 ASDIYSFGIVALQLLSG-------------QKVIELDFDARDQLTRKARDV 282
+SD+++ G + QL++G QK+I+L++D KARD+
Sbjct: 217 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFPKARDL 267
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 15/217 (6%)
Query: 53 LYRFSKDEIENAINNDWDRRFLGRGSAGLVYKG--VLPSGQ--VVAIKHI---YKSNNTD 105
++ F+K+ I+ D + +G G G V G LPS + VAIK + Y
Sbjct: 33 VHEFAKELDATNISID---KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR 89
Query: 106 SFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVK 165
F E + + HPN++ L G + +V E+ G+L L + D+ T + V
Sbjct: 90 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG 149
Query: 166 ILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDV 225
+LR A ++YL D VHRD+ NIL+ L K+SDFGL+++L + +T
Sbjct: 150 MLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 206
Query: 226 RGTIG--YMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
G I + PE + K T ASD++S+GIV +++S
Sbjct: 207 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 15/217 (6%)
Query: 53 LYRFSKDEIENAINNDWDRRFLGRGSAGLVYKG--VLPSGQ--VVAIKHI---YKSNNTD 105
++ F+K+ I+ D + +G G G V G LPS + VAIK + Y
Sbjct: 35 VHEFAKELDATNISID---KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR 91
Query: 106 SFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVK 165
F E + + HPN++ L G + +V E+ G+L L + D+ T + V
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG 151
Query: 166 ILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDV 225
+LR A ++YL D VHRD+ NIL+ L K+SDFGL+++L + +T
Sbjct: 152 MLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 226 RGTIG--YMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
G I + PE + K T ASD++S+GIV +++S
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 15/217 (6%)
Query: 53 LYRFSKDEIENAINNDWDRRFLGRGSAGLVYKG--VLPSGQ--VVAIKHI---YKSNNTD 105
++ F+K+ I+ D + +G G G V G LPS + VAIK + Y
Sbjct: 35 VHEFAKELDATNISID---KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR 91
Query: 106 SFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVK 165
F E + + HPN++ L G + +V E+ G+L L + D+ T + V
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG 151
Query: 166 ILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDV 225
+LR A ++YL D VHRD+ NIL+ L K+SDFGL+++L + +T
Sbjct: 152 MLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 226 RGTIG--YMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
G I + PE + K T ASD++S+GIV +++S
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 15/217 (6%)
Query: 53 LYRFSKDEIENAINNDWDRRFLGRGSAGLVYKG--VLPSGQ--VVAIKHI---YKSNNTD 105
++ F+K+ I+ D + +G G G V G LPS + VAIK + Y
Sbjct: 35 VHEFAKELDATNISID---KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR 91
Query: 106 SFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVK 165
F E + + HPN++ L G + +V E+ G+L L + D+ T + V
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG 151
Query: 166 ILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDV 225
+LR A ++YL D VHRD+ NIL+ L K+SDFGL+++L + +T
Sbjct: 152 MLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 226 RGTIG--YMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
G I + PE + K T ASD++S+GIV +++S
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 15/217 (6%)
Query: 53 LYRFSKDEIENAINNDWDRRFLGRGSAGLVYKG--VLPSGQ--VVAIKHI---YKSNNTD 105
++ F+K+ I+ D + +G G G V G LPS + VAIK + Y
Sbjct: 35 VHEFAKELDATNISID---KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR 91
Query: 106 SFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVK 165
F E + + HPN++ L G + +V E+ G+L L + D+ T + V
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG 151
Query: 166 ILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDV 225
+LR A ++YL D VHRD+ NIL+ L K+SDFGL+++L + +T
Sbjct: 152 MLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 226 RGTIG--YMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
G I + PE + K T ASD++S+GIV +++S
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 111/231 (48%), Gaps = 24/231 (10%)
Query: 72 RFLGRGS-AGLVYKGVLPSGQVVAIK-----HIYKSNNTDSFSREVEGLSRVRHPNLVCL 125
+ LG GS + +V L + + AIK HI K N +RE + +SR+ HP V L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+ + + Y + G L +++ + S R + AL YLH I
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH---GKGI 153
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAKLTC 244
+HRD+K NILL E + +++DFG AK+L E + + GT Y+ PE +T
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 213
Query: 245 ASDIYSFGIVALQLLSG-------------QKVIELDFDARDQLTRKARDV 282
+SD+++ G + QL++G K+I+L++D ++ KARD+
Sbjct: 214 SSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDL 264
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 103/192 (53%), Gaps = 9/192 (4%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIK--HIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCV 130
+G+G++G VY + + +GQ VAI+ ++ + + E+ + ++PN+V +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 131 EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDI 190
G E ++V E+ A G+L + ++ + + + R+C AL +LH ++HR+I
Sbjct: 89 VGDELWVVMEYLAGGSLTD--VVTETCMDEGQIAAVCRECLQALEFLH---SNQVIHRNI 143
Query: 191 KLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYS 250
K NILL KL+DFG + E+SK T V GT +M PE +T DI+S
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDIWS 202
Query: 251 FGIVALQLLSGQ 262
GI+A++++ G+
Sbjct: 203 LGIMAIEMIEGE 214
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 15/217 (6%)
Query: 53 LYRFSKDEIENAINNDWDRRFLGRGSAGLVYKG--VLPSGQ--VVAIKHI---YKSNNTD 105
++ F+K+ I+ D + +G G G V G LPS + VAIK + Y
Sbjct: 35 VHEFAKELDATNISID---KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR 91
Query: 106 SFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVK 165
F E + + HPN++ L G + +V E+ G+L L + D+ T + V
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG 151
Query: 166 ILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDV 225
+LR A ++YL D VHRD+ NIL+ L K+SDFGL ++L + +T
Sbjct: 152 MLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTR 208
Query: 226 RGTIG--YMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
G I + PE + K T ASD++S+GIV +++S
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 103/192 (53%), Gaps = 9/192 (4%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIK--HIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCV 130
+G+G++G VY + + +GQ VAI+ ++ + + E+ + ++PN+V +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 131 EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDI 190
G E ++V E+ A G+L + ++ + + + R+C AL +LH ++HRDI
Sbjct: 89 VGDELWVVMEYLAGGSLTD--VVTETCMDEGQIAAVCRECLQALEFLH---SNQVIHRDI 143
Query: 191 KLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYS 250
K NILL KL+DFG + E+SK + + GT +M PE +T DI+S
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSXMVGTPYWMAPEVVTRKAYGPKVDIWS 202
Query: 251 FGIVALQLLSGQ 262
GI+A++++ G+
Sbjct: 203 LGIMAIEMIEGE 214
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 103/192 (53%), Gaps = 9/192 (4%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIK--HIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCV 130
+G+G++G VY + + +GQ VAI+ ++ + + E+ + ++PN+V +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 131 EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDI 190
G E ++V E+ A G+L + ++ + + + R+C AL +LH ++HRDI
Sbjct: 88 VGDELWVVMEYLAGGSLTD--VVTETCMDEGQIAAVCRECLQALEFLH---SNQVIHRDI 142
Query: 191 KLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYS 250
K NILL KL+DFG + E+SK + + GT +M PE +T DI+S
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSXMVGTPYWMAPEVVTRKAYGPKVDIWS 201
Query: 251 FGIVALQLLSGQ 262
GI+A++++ G+
Sbjct: 202 LGIMAIEMIEGE 213
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 123/278 (44%), Gaps = 27/278 (9%)
Query: 72 RFLGRGSAGLVYKG--VLPSGQ--VVAIKHI---YKSNNTDSFSREVEGLSRVRHPNLVC 124
R +G G G V G LP + VAIK + Y F E + + HPN++
Sbjct: 28 RVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIH 87
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
L G + +V E+ G+L L + D T + V +LR + ++YL D
Sbjct: 88 LEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLS---DMG 144
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIG--YMDPEYMTNAKL 242
VHRD+ NIL+ L K+SDFGL+++L + +T G I + PE + K
Sbjct: 145 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKF 204
Query: 243 TCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNIN 302
T ASD++S+GIV +++S + + +D + + V G R + P
Sbjct: 205 TSASDVWSYGIVMWEVVSYGERPYWEMTNQDVI----KAVEEGYRLPSPMDCP------- 253
Query: 303 RADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWKN 340
++ ++ + C K RP D + +DK +N
Sbjct: 254 ----AALYQLMLDCWQKERNSRPKFDEIVNMLDKLIRN 287
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 135/304 (44%), Gaps = 40/304 (13%)
Query: 52 GLYRFSKDEIENAINNDWD-RRFLGRGSAGLVYKG-VLPSGQVVAIKHIYKSNNT----- 104
G F K + +N+ + + +G+G GLV+KG ++ VVAIK + ++
Sbjct: 4 GGSEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM 63
Query: 105 ----DSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTW 160
F REV +S + HPN+V L+G +V EF G+L LL K + W
Sbjct: 64 IEKFQEFQREVFIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPIKW 121
Query: 161 ERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLE-----PKLSDFGLAKMLG 215
+++++ D AL + Y+ + + IVHRD++ NI L E K++DFG ++
Sbjct: 122 SVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ--- 177
Query: 216 MEESKVFTDVRGTIGYMDPEYM--TNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARD 273
+ + + G +M PE + T +D YSF ++ +L+G+ + +
Sbjct: 178 -QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI 236
Query: 274 QLTRKARDVSMGKRP-IKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332
+ R+ G RP I + PRL I LC + K RP + +
Sbjct: 237 KFINMIRE--EGLRPTIPEDCPPRLRNVIE------------LCWSGDPKKRPHFSYIVK 282
Query: 333 EIDK 336
E+ +
Sbjct: 283 ELSE 286
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 135/304 (44%), Gaps = 40/304 (13%)
Query: 52 GLYRFSKDEIENAINNDWD-RRFLGRGSAGLVYKG-VLPSGQVVAIKHIYKSNNT----- 104
G F K + +N+ + + +G+G GLV+KG ++ VVAIK + ++
Sbjct: 4 GGSEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM 63
Query: 105 ----DSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTW 160
F REV +S + HPN+V L+G +V EF G+L LL K + W
Sbjct: 64 IEKFQEFQREVFIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPIKW 121
Query: 161 ERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLE-----PKLSDFGLAKMLG 215
+++++ D AL + Y+ + + IVHRD++ NI L E K++DF L++
Sbjct: 122 SVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ--- 177
Query: 216 MEESKVFTDVRGTIGYMDPEYM--TNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARD 273
+ + + G +M PE + T +D YSF ++ +L+G+ + +
Sbjct: 178 -QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI 236
Query: 274 QLTRKARDVSMGKRP-IKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332
+ R+ G RP I + PRL I LC + K RP + +
Sbjct: 237 KFINMIRE--EGLRPTIPEDCPPRLRNVIE------------LCWSGDPKKRPHFSYIVK 282
Query: 333 EIDK 336
E+ +
Sbjct: 283 ELSE 286
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 15/217 (6%)
Query: 53 LYRFSKDEIENAINNDWDRRFLGRGSAGLVYKG--VLPSGQ--VVAIKHI---YKSNNTD 105
++ F+K+ I+ D + +G G G V G LPS + VAIK + Y
Sbjct: 6 VHEFAKELDATNISID---KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR 62
Query: 106 SFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVK 165
F E + + HPN++ L G + +V E G+L L + D+ T + V
Sbjct: 63 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVG 122
Query: 166 ILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDV 225
+LR A ++YL D VHRD+ NIL+ L K+SDFGL+++L + +T
Sbjct: 123 MLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
Query: 226 RGTIG--YMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
G I + PE + K T ASD++S+GIV +++S
Sbjct: 180 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 15/217 (6%)
Query: 53 LYRFSKDEIENAINNDWDRRFLGRGSAGLVYKG--VLPSGQ--VVAIKHI---YKSNNTD 105
++ F+K+ I+ D + +G G G V G LPS + VAIK + Y
Sbjct: 35 VHEFAKELDATNISID---KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR 91
Query: 106 SFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVK 165
F E + + HPN++ L G + +V E G+L L + D+ T + V
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVG 151
Query: 166 ILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDV 225
+LR A ++YL D VHRD+ NIL+ L K+SDFGL+++L + +T
Sbjct: 152 MLRGIASGMKYLS---DMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 226 RGTIG--YMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
G I + PE + K T ASD++S+GIV +++S
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 15/217 (6%)
Query: 53 LYRFSKDEIENAINNDWDRRFLGRGSAGLVYKG--VLPSGQ--VVAIKHI---YKSNNTD 105
++ F+K+ I+ D + +G G G V G LPS + VAIK + Y
Sbjct: 35 VHEFAKELDATNISID---KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR 91
Query: 106 SFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVK 165
F E + + HPN++ L G + +V E G+L L + D+ T + V
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVG 151
Query: 166 ILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDV 225
+LR A ++YL D VHRD+ NIL+ L K+SDFGL+++L + +T
Sbjct: 152 MLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 226 RGTIG--YMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
G I + PE + K T ASD++S+GIV +++S
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 13/200 (6%)
Query: 71 RRFLGRGSAGLVYKGVLPSGQ-----VVAIKHI---YKSNNTDSFSREVEGLSRVRHPNL 122
++ +G G G VYKG+L + VAIK + Y F E + + H N+
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI 108
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYID 182
+ L G + ++ E+ G L + L KD + + V +LR A ++YL +
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM-- 166
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIG--YMDPEYMTNA 240
VHRD+ NIL+ L K+SDFGL+++L + +T G I + PE ++
Sbjct: 167 -NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYR 225
Query: 241 KLTCASDIYSFGIVALQLLS 260
K T ASD++SFGIV ++++
Sbjct: 226 KFTSASDVWSFGIVMWEVMT 245
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 102/213 (47%), Gaps = 10/213 (4%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVE-G 132
+G+G G V G G VA+K I +F E ++++RH NLV L G VE
Sbjct: 14 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEK 72
Query: 133 GEQYLVYEFCAAGNLAQHLL-RKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIK 191
G Y+V E+ A G+L +L R SVL + +K D A+ YL VHRD+
Sbjct: 73 GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLA 129
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
N+L++E K+SDFGL K E S + + + PE + K + SD++SF
Sbjct: 130 ARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSF 185
Query: 252 GIVALQLLSGQKVIELDFDARDQLTRKARDVSM 284
GI+ ++ S +V +D + R + M
Sbjct: 186 GILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM 218
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 102/213 (47%), Gaps = 10/213 (4%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVE-G 132
+G+G G V G G VA+K I +F E ++++RH NLV L G VE
Sbjct: 20 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEK 78
Query: 133 GEQYLVYEFCAAGNLAQHLL-RKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIK 191
G Y+V E+ A G+L +L R SVL + +K D A+ YL VHRD+
Sbjct: 79 GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLA 135
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
N+L++E K+SDFGL K E S + + + PE + A + SD++SF
Sbjct: 136 ARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSF 191
Query: 252 GIVALQLLSGQKVIELDFDARDQLTRKARDVSM 284
GI+ ++ S +V +D + R + M
Sbjct: 192 GILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM 224
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 102/213 (47%), Gaps = 10/213 (4%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVE-G 132
+G+G G V G G VA+K I +F E ++++RH NLV L G VE
Sbjct: 29 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEK 87
Query: 133 GEQYLVYEFCAAGNLAQHLL-RKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIK 191
G Y+V E+ A G+L +L R SVL + +K D A+ YL VHRD+
Sbjct: 88 GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLA 144
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
N+L++E K+SDFGL K E S + + + PE + K + SD++SF
Sbjct: 145 ARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSF 200
Query: 252 GIVALQLLSGQKVIELDFDARDQLTRKARDVSM 284
GI+ ++ S +V +D + R + M
Sbjct: 201 GILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM 233
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 102/213 (47%), Gaps = 10/213 (4%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVE-G 132
+G+G G V G G VA+K I +F E ++++RH NLV L G VE
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEK 259
Query: 133 GEQYLVYEFCAAGNLAQHLL-RKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIK 191
G Y+V E+ A G+L +L R SVL + +K D A+ YL VHRD+
Sbjct: 260 GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLA 316
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
N+L++E K+SDFGL K E S + + + PE + K + SD++SF
Sbjct: 317 ARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSF 372
Query: 252 GIVALQLLSGQKVIELDFDARDQLTRKARDVSM 284
GI+ ++ S +V +D + R + M
Sbjct: 373 GILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM 405
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 101/200 (50%), Gaps = 14/200 (7%)
Query: 72 RFLGRGSAGLV----YKGVLP-SGQVVAIKHIYKSNNTD--SFSREVEGLSRVRHPNLVC 124
R LG+G+ G V Y + +G+VVA+K + S F RE+E L ++H N+V
Sbjct: 19 RQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 125 LFGCCVEGGEQYL--VYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYID 182
G C G + L + EF G+L ++L + + +K+L+ + + + +
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERID---HIKLLQYTSQICKGMEYLGT 135
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM--EESKVFTDVRGTIGYMDPEYMTNA 240
+HRD+ NIL+ + K+ DFGL K+L E KV I + PE +T +
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 241 KLTCASDIYSFGIVALQLLS 260
K + ASD++SFG+V +L +
Sbjct: 196 KFSVASDVWSFGVVLYELFT 215
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 124/272 (45%), Gaps = 26/272 (9%)
Query: 71 RRFLGRGSAGLVYKG-VLPSGQVVAIKHIYK---SNNTDSFSREVEGLSRVRHPNLVCLF 126
+ +G G+ +V P + VAIK I + D +E++ +S+ HPN+V +
Sbjct: 15 QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYY 74
Query: 127 GCCVEGGEQYLVYEFCAAG---NLAQHLL----RKDSVLTWERRVKILRDCALALRYLHH 179
V E +LV + + G ++ +H++ K VL ILR+ L YLH
Sbjct: 75 TSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK 134
Query: 180 YIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLG----MEESKVFTDVRGTIGYMDPE 235
+G I HRD+K NILL E +++DFG++ L + +KV GT +M PE
Sbjct: 135 --NGQI-HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE 191
Query: 236 YMTNAK-LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFED 294
M + +DI+SFGI A++L +G + + D + ++D E
Sbjct: 192 VMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEM 251
Query: 295 PRLNGNINRADFESILKIAVLCVAKSSKGRPT 326
+ G +S K+ LC+ K + RPT
Sbjct: 252 LKKYG-------KSFRKMISLCLQKDPEKRPT 276
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 102/207 (49%), Gaps = 19/207 (9%)
Query: 71 RRFLGRGSAGLVYKG-VLPSGQVVAIKHIYK---SNNTDSFSREVEGLSRVRHPNLVCLF 126
+ +G G+ +V P + VAIK I + D +E++ +S+ HPN+V +
Sbjct: 20 QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYY 79
Query: 127 GCCVEGGEQYLVYEFCAAG---NLAQHLL----RKDSVLTWERRVKILRDCALALRYLHH 179
V E +LV + + G ++ +H++ K VL ILR+ L YLH
Sbjct: 80 TSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK 139
Query: 180 YIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLG----MEESKVFTDVRGTIGYMDPE 235
+G I HRD+K NILL E +++DFG++ L + +KV GT +M PE
Sbjct: 140 --NGQI-HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE 196
Query: 236 YMTNAK-LTCASDIYSFGIVALQLLSG 261
M + +DI+SFGI A++L +G
Sbjct: 197 VMEQVRGYDFKADIWSFGITAIELATG 223
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 123/271 (45%), Gaps = 31/271 (11%)
Query: 74 LGRGSAGLVYKGVLPS-GQVVAIKHIYKSNNTD---SFSREVEGLSRVRHPNLVCLFGCC 129
+GRG+ G V+ G L + +VA+K ++ D F +E L + HPN+V L G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 130 VEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRD 189
+ Y+V E G+ L + + L + ++++ D A + YL C +HRD
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRD 238
Query: 190 IKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRG----TIGYMDPEYMTNAKLTCA 245
+ N L+TEK K+SDFG+++ E V+ G + + PE + + +
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSR---EEADGVYAASGGLRQVPVKWTAPEALNYGRYSSE 295
Query: 246 SDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRA 304
SD++SFGI+ + S G + +Q TR+ + G+ P +
Sbjct: 296 SDVWSFGILLWETFSLGASPYP---NLSNQQTREFVEKG-GRLPCPELCP---------- 341
Query: 305 DFESILKIAVLCVAKSSKGRPTIDVVYEEID 335
+++ ++ C A RP+ +Y+E+
Sbjct: 342 --DAVFRLMEQCWAYEPGQRPSFSTIYQELQ 370
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 123/272 (45%), Gaps = 33/272 (12%)
Query: 74 LGRGSAGLVYKGVLPS-GQVVAIKHIYKSNNTD---SFSREVEGLSRVRHPNLVCLFGCC 129
+GRG+ G V+ G L + +VA+K ++ D F +E L + HPN+V L G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 130 VEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRD 189
+ Y+V E G+ L + + L + ++++ D A + YL C +HRD
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRD 238
Query: 190 IKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRG-----TIGYMDPEYMTNAKLTC 244
+ N L+TEK K+SDFG+++ EE+ G + + PE + + +
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSR----EEADGVXAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 245 ASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINR 303
SD++SFGI+ + S G + +Q TR+ + G+ P +
Sbjct: 295 ESDVWSFGILLWETFSLGASPYP---NLSNQQTREFVEKG-GRLPCPELCP--------- 341
Query: 304 ADFESILKIAVLCVAKSSKGRPTIDVVYEEID 335
+++ ++ C A RP+ +Y+E+
Sbjct: 342 ---DAVFRLMEQCWAYEPGQRPSFSTIYQELQ 370
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 72 RFLGRGSAGLVYKG--VLPSGQ--VVAIKHI---YKSNNTDSFSREVEGLSRVRHPNLVC 124
+ +G G G V G LP + VAIK + Y F E + + HPN++
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
L G + ++ EF G+L L + D T + V +LR A ++YL D
Sbjct: 99 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADMN 155
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES-KVFTDVRG---TIGYMDPEYMTNA 240
VHRD+ NIL+ L K+SDFGL++ L + S +T G I + PE +
Sbjct: 156 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYR 215
Query: 241 KLTCASDIYSFGIVALQLLS 260
K T ASD++S+GIV +++S
Sbjct: 216 KFTSASDVWSYGIVMWEVMS 235
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 93/188 (49%), Gaps = 12/188 (6%)
Query: 91 QVVAIKHIYK---SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNL 147
++VAIK I K S E+ L +++HPN+V L GG YL+ + + G L
Sbjct: 44 KLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 148 AQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNIL---LTEKLEPK 204
++ K T +++ A++YLH D IVHRD+K N+L L E +
Sbjct: 104 FDRIVEK-GFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIM 159
Query: 205 LSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKV 264
+SDFGL+KM + V + GT GY+ PE + + A D +S G++A LL G
Sbjct: 160 ISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
Query: 265 IELDFDAR 272
+ DA+
Sbjct: 218 FYDENDAK 225
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 110/212 (51%), Gaps = 19/212 (8%)
Query: 72 RFLGRGSAGLVYKGVLPSG----QVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLV 123
+ LG+GS G V+ SG Q+ A+K + K+ + E + L V HP +V
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKI-LRDCALALRYLHHYID 182
L G+ YL+ +F G+L L ++ V+ E VK L + ALAL +LH
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSL-- 145
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKL 242
I++RD+K NILL E+ KL+DFGL+K E K ++ GT+ YM PE +
Sbjct: 146 -GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC-GTVEYMAPEVVNRRGH 203
Query: 243 TCASDIYSFGIVALQLLSGQKVIELDFDARDQ 274
T ++D +SFG++ ++L+G L F +D+
Sbjct: 204 TQSADWWSFGVLMFEMLTGT----LPFQGKDR 231
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 110/212 (51%), Gaps = 19/212 (8%)
Query: 72 RFLGRGSAGLVYKGVLPSG----QVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLV 123
+ LG+GS G V+ SG Q+ A+K + K+ + E + L V HP +V
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 90
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKI-LRDCALALRYLHHYID 182
L G+ YL+ +F G+L L ++ V+ E VK L + ALAL +LH
Sbjct: 91 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSL-- 146
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKL 242
I++RD+K NILL E+ KL+DFGL+K E K ++ GT+ YM PE +
Sbjct: 147 -GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC-GTVEYMAPEVVNRRGH 204
Query: 243 TCASDIYSFGIVALQLLSGQKVIELDFDARDQ 274
T ++D +SFG++ ++L+G L F +D+
Sbjct: 205 TQSADWWSFGVLMFEMLTGT----LPFQGKDR 232
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 110/212 (51%), Gaps = 19/212 (8%)
Query: 72 RFLGRGSAGLVYKGVLPSG----QVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLV 123
+ LG+GS G V+ SG Q+ A+K + K+ + E + L V HP +V
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKI-LRDCALALRYLHHYID 182
L G+ YL+ +F G+L L ++ V+ E VK L + ALAL +LH
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSL-- 145
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKL 242
I++RD+K NILL E+ KL+DFGL+K E K ++ GT+ YM PE +
Sbjct: 146 -GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC-GTVEYMAPEVVNRRGH 203
Query: 243 TCASDIYSFGIVALQLLSGQKVIELDFDARDQ 274
T ++D +SFG++ ++L+G L F +D+
Sbjct: 204 TQSADWWSFGVLMFEMLTGT----LPFQGKDR 231
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 111/212 (52%), Gaps = 19/212 (8%)
Query: 72 RFLGRGSAG---LVYKGVLP-SGQVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLV 123
+ LG+GS G LV K P SG + A+K + K+ + E + L+ V HP +V
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVV 93
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKI-LRDCALALRYLHHYID 182
L G+ YL+ +F G+L L ++ V+ E VK L + AL L +LH
Sbjct: 94 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALGLDHLHSL-- 149
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKL 242
I++RD+K NILL E+ KL+DFGL+K E K ++ GT+ YM PE +
Sbjct: 150 -GIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS-FCGTVEYMAPEVVNRQGH 207
Query: 243 TCASDIYSFGIVALQLLSGQKVIELDFDARDQ 274
+ ++D +S+G++ ++L+G L F +D+
Sbjct: 208 SHSADWWSYGVLMFEMLTGS----LPFQGKDR 235
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 93/188 (49%), Gaps = 12/188 (6%)
Query: 91 QVVAIKHIYKS---NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNL 147
++VAIK I K S E+ L +++HPN+V L GG YL+ + + G L
Sbjct: 44 KLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 148 AQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNIL---LTEKLEPK 204
++ K T +++ A++YLH D IVHRD+K N+L L E +
Sbjct: 104 FDRIVEK-GFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIM 159
Query: 205 LSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKV 264
+SDFGL+KM + V + GT GY+ PE + + A D +S G++A LL G
Sbjct: 160 ISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
Query: 265 IELDFDAR 272
+ DA+
Sbjct: 218 FYDENDAK 225
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 72 RFLGRGSAGLVYKGVLP-SGQ------VVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVC 124
+ +G G +G V G L GQ + A+K Y F E + + HPN++
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
L G G +V E+ G+L L D T + V +LR +RYL D
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLG 171
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIG--YMDPEYMTNAKL 242
VHRD+ N+L+ L K+SDFGL+++L + +T G I + PE +
Sbjct: 172 YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTF 231
Query: 243 TCASDIYSFGIVALQLLS 260
+ ASD++SFG+V ++L+
Sbjct: 232 SSASDVWSFGVVMWEVLA 249
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 115/278 (41%), Gaps = 29/278 (10%)
Query: 74 LGRGSAGLVYKGVLPSG----QVVAIKHI---YKSNNTDSFSREVEGLSRVRHPNLVCLF 126
+G G G V +G L + VAIK + Y F E + + HPN++ L
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 127 GCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIV 186
G ++ EF G L L D T + V +LR A +RYL V
Sbjct: 82 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEM---SYV 138
Query: 187 HRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES-KVFTDVRG---TIGYMDPEYMTNAKL 242
HRD+ NIL+ L K+SDFGL++ L S +T G I + PE + K
Sbjct: 139 HRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKF 198
Query: 243 TCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNIN 302
T ASD +S+GIV +++S + D +D + +D + P + P
Sbjct: 199 TSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPP----DCP------- 247
Query: 303 RADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWKN 340
S+ ++ + C K RP V +DK +N
Sbjct: 248 ----TSLHQLMLDCWQKDRNARPRFPQVVSALDKMIRN 281
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 109/230 (47%), Gaps = 26/230 (11%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ-VVAIKHIYKSNNTDS-----FSREVEGLSRVRHPNLVCL 125
R LG+G G VY + ++A+K ++K+ + REVE S +RHPN++ L
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+G + YL+ E+ G + + L+K S +R + + A AL Y H +
Sbjct: 75 YGYFHDATRVYLILEYAPLGTVYRE-LQKLSKFDEQRTATYITELANALSYCH---SKRV 130
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
+HRDIK N+LL E K++DFG + S TD+ GT+ Y+ PE +
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDYLPPEMIEGRMHDEK 187
Query: 246 SDIYSFGIVALQLLSGQKVIE-------------LDFDARDQLTRKARDV 282
D++S G++ + L G+ E ++F D +T ARD+
Sbjct: 188 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDL 237
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 109/230 (47%), Gaps = 26/230 (11%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ-VVAIKHIYKSNNTDS-----FSREVEGLSRVRHPNLVCL 125
R LG+G G VY + ++A+K ++K+ + REVE S +RHPN++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+G + YL+ E+ G + + L+K S +R + + A AL Y H +
Sbjct: 79 YGYFHDATRVYLILEYAPLGTVYRE-LQKLSKFDEQRTATYITELANALSYCH---SKRV 134
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
+HRDIK N+LL E K++DFG + S TD+ GT+ Y+ PE +
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDYLPPEMIEGRMHDEK 191
Query: 246 SDIYSFGIVALQLLSGQKVIE-------------LDFDARDQLTRKARDV 282
D++S G++ + L G+ E ++F D +T ARD+
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDL 241
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 109/230 (47%), Gaps = 26/230 (11%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ-VVAIKHIYKSNNTDS-----FSREVEGLSRVRHPNLVCL 125
R LG+G G VY + ++A+K ++K+ + REVE S +RHPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+G + YL+ E+ G + + L+K S +R + + A AL Y H +
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRE-LQKLSKFDEQRTATYITELANALSYCH---SKRV 129
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
+HRDIK N+LL E K++DFG + S TD+ GT+ Y+ PE +
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDYLPPEMIEGRMHDEK 186
Query: 246 SDIYSFGIVALQLLSGQKVIE-------------LDFDARDQLTRKARDV 282
D++S G++ + L G+ E ++F D +T ARD+
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDL 236
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 109/230 (47%), Gaps = 26/230 (11%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ-VVAIKHIYKSNNTDS-----FSREVEGLSRVRHPNLVCL 125
R LG+G G VY + ++A+K ++K+ + REVE S +RHPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+G + YL+ E+ G + + L+K S +R + + A AL Y H +
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRE-LQKLSKFDEQRTATYITELANALSYCH---SKRV 129
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
+HRDIK N+LL E K++DFG + S TD+ GT+ Y+ PE +
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDYLPPEMIEGRMHDEK 186
Query: 246 SDIYSFGIVALQLLSGQKVIE-------------LDFDARDQLTRKARDV 282
D++S G++ + L G+ E ++F D +T ARD+
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDL 236
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 94/190 (49%), Gaps = 12/190 (6%)
Query: 89 SGQVVAIKHIYKS---NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+ ++VAIK I K S E+ L +++HPN+V L GG YL+ + + G
Sbjct: 42 TQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGG 101
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNIL---LTEKLE 202
L ++ K T +++ A++YLH D IVHRD+K N+L L E +
Sbjct: 102 ELFDRIVEK-GFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSK 157
Query: 203 PKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQ 262
+SDFGL+KM + V + GT GY+ PE + + A D +S G++A LL G
Sbjct: 158 IMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 215
Query: 263 KVIELDFDAR 272
+ DA+
Sbjct: 216 PPFYDENDAK 225
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 93/188 (49%), Gaps = 12/188 (6%)
Query: 91 QVVAIKHIYKS---NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNL 147
++VAIK I K S E+ L +++HPN+V L GG YL+ + + G L
Sbjct: 44 KLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 148 AQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNIL---LTEKLEPK 204
++ K T +++ A++YLH D IVHRD+K N+L L E +
Sbjct: 104 FDRIVEK-GFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIM 159
Query: 205 LSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKV 264
+SDFGL+KM + V + GT GY+ PE + + A D +S G++A LL G
Sbjct: 160 ISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
Query: 265 IELDFDAR 272
+ DA+
Sbjct: 218 FYDENDAK 225
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 115/262 (43%), Gaps = 28/262 (10%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGG 133
+GRG+ G+V K + VAIK I + +F E+ LSRV HPN+V L+G C+
Sbjct: 16 VGRGAFGVVCKAKW-RAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL--N 72
Query: 134 EQYLVYEFCAAGNLAQ--HLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIK 191
LV E+ G+L H T + C+ + YLH ++HRD+K
Sbjct: 73 PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLK 132
Query: 192 LTNILLTE-KLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYS 250
N+LL K+ DFG A + T+ +G+ +M PE + + D++S
Sbjct: 133 PPNLLLVAGGTVLKICDFGTACDIQTH----MTNNKGSAAWMAPEVFEGSNYSEKCDVFS 188
Query: 251 FGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRP--IKDFEDPRLNGNINRADFES 308
+GI+ ++++ +K + + R V G RP IK+ P
Sbjct: 189 WGIILWEVITRRKPFD---EIGGPAFRIMWAVHNGTRPPLIKNLPKP------------- 232
Query: 309 ILKIAVLCVAKSSKGRPTIDVV 330
I + C +K RP+++ +
Sbjct: 233 IESLMTRCWSKDPSQRPSMEEI 254
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 115/262 (43%), Gaps = 28/262 (10%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGG 133
+GRG+ G+V K + VAIK I + +F E+ LSRV HPN+V L+G C+
Sbjct: 17 VGRGAFGVVCKAKW-RAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL--N 73
Query: 134 EQYLVYEFCAAGNLAQ--HLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIK 191
LV E+ G+L H T + C+ + YLH ++HRD+K
Sbjct: 74 PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLK 133
Query: 192 LTNILLTEKLEP-KLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYS 250
N+LL K+ DFG A + T+ +G+ +M PE + + D++S
Sbjct: 134 PPNLLLVAGGTVLKICDFGTACDIQTH----MTNNKGSAAWMAPEVFEGSNYSEKCDVFS 189
Query: 251 FGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRP--IKDFEDPRLNGNINRADFES 308
+GI+ ++++ +K + + R V G RP IK+ P
Sbjct: 190 WGIILWEVITRRKPFD---EIGGPAFRIMWAVHNGTRPPLIKNLPKP------------- 233
Query: 309 ILKIAVLCVAKSSKGRPTIDVV 330
I + C +K RP+++ +
Sbjct: 234 IESLMTRCWSKDPSQRPSMEEI 255
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 19/204 (9%)
Query: 73 FLGRGSAGLVYKGV-LPSGQVVAIKHI-YKSNNTDSFSREVEGLSRV-RHPNLVCLFGCC 129
+G G+ G VYKG + +GQ+ AIK + + + +E+ L + H N+ +G
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAF 90
Query: 130 VEGG------EQYLVYEFCAAGNLAQHLLR-KDSVLTWERRVKILRDCALALRYLHHYID 182
++ + +LV EFC AG++ + K + L E I R+ L +LH +
Sbjct: 91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH-- 148
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMT---- 238
++HRDIK N+LLTE E KL DFG++ L + T + GT +M PE +
Sbjct: 149 -KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPYWMAPEVIACDEN 206
Query: 239 -NAKLTCASDIYSFGIVALQLLSG 261
+A SD++S GI A+++ G
Sbjct: 207 PDATYDFKSDLWSLGITAIEMAEG 230
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ-VVAIKHIYKSNNTDS-----FSREVEGLSRVRHPNLVCL 125
R LG+G G VY + ++A+K ++K+ + REVE S +RHPN++ L
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+G + YL+ E+ G + + L+K S +R + + A AL Y H +
Sbjct: 75 YGYFHDATRVYLILEYAPLGTVYRE-LQKLSKFDEQRTATYITELANALSYCH---SKRV 130
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
+HRDIK N+LL E K++DFG + S T + GT+ Y+ PE +
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWS---CHAPSSRRTTLSGTLDYLPPEMIEGRMHDEK 187
Query: 246 SDIYSFGIVALQLLSGQKVIE-------------LDFDARDQLTRKARDV 282
D++S G++ + L G+ E ++F D +T ARD+
Sbjct: 188 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDL 237
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 99/193 (51%), Gaps = 10/193 (5%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIKHI---YKSNNTDSFSREVEGLSRVRHPNLVCLFGCC 129
+G+GS G VYKG+ + +VVAIK I + + +E+ LS+ P + FG
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 130 VEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRD 189
++ + +++ E+ G+ L K L ILR+ L YLH +HRD
Sbjct: 87 LKSTKLWIIMEYLGGGSALD--LLKPGPLEETYIATILREILKGLDYLHSERK---IHRD 141
Query: 190 IKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIY 249
IK N+LL+E+ + KL+DFG+A L + K V GT +M PE + + +DI+
Sbjct: 142 IKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDFKADIW 200
Query: 250 SFGIVALQLLSGQ 262
S GI A++L G+
Sbjct: 201 SLGITAIELAKGE 213
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 92/198 (46%), Gaps = 12/198 (6%)
Query: 72 RFLGRGSAGLVYKGVLP-SGQ------VVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVC 124
+ +G G +G V G L GQ + A+K Y F E + + HPN++
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
L G G +V E+ G+L L D T + V +LR +RYL D
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLG 171
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIG--YMDPEYMTNAKL 242
VHRD+ N+L+ L K+SDFGL+++L + T G I + PE +
Sbjct: 172 YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTF 231
Query: 243 TCASDIYSFGIVALQLLS 260
+ ASD++SFG+V ++L+
Sbjct: 232 SSASDVWSFGVVMWEVLA 249
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 109/230 (47%), Gaps = 26/230 (11%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ-VVAIKHIYKSNNTDS-----FSREVEGLSRVRHPNLVCL 125
R LG+G G VY + ++A+K ++K+ + REVE S +RHPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+G + YL+ E+ G + + L+K S +R + + A AL Y H +
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRE-LQKLSKFDEQRTATYITELANALSYCH---SKRV 129
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
+HRDIK N+LL E K++DFG + S T++ GT+ Y+ PE +
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTELCGTLDYLPPEMIEGRMHDEK 186
Query: 246 SDIYSFGIVALQLLSGQKVIE-------------LDFDARDQLTRKARDV 282
D++S G++ + L G+ E ++F D +T ARD+
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDL 236
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 99/193 (51%), Gaps = 10/193 (5%)
Query: 74 LGRGSAGLVYKGVLPSGQ-VVAIKHI---YKSNNTDSFSREVEGLSRVRHPNLVCLFGCC 129
+G+GS G V+KG+ Q VVAIK I + + +E+ LS+ P + +G
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 130 VEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRD 189
++ + +++ E+ G+ L + L + ILR+ L YLH +HRD
Sbjct: 75 LKDTKLWIIMEYLGGGSALD--LLEPGPLDETQIATILREILKGLDYLHSEKK---IHRD 129
Query: 190 IKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIY 249
IK N+LL+E E KL+DFG+A L + K T V GT +M PE + + +DI+
Sbjct: 130 IKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDSKADIW 188
Query: 250 SFGIVALQLLSGQ 262
S GI A++L G+
Sbjct: 189 SLGITAIELARGE 201
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 99/198 (50%), Gaps = 14/198 (7%)
Query: 74 LGRGSAGLV----YKGVLP-SGQVVAIKHIYKSNNTD--SFSREVEGLSRVRHPNLVCLF 126
LG+G+ G V Y + +G+VVA+K + S F RE+E L ++H N+V
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 127 GCCVEGGEQYL--VYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
G C G + L + E+ G+L +L + + +K+L+ + + + +
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID---HIKLLQYTSQICKGMEYLGTKR 133
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM--EESKVFTDVRGTIGYMDPEYMTNAKL 242
+HRD+ NIL+ + K+ DFGL K+L E KV I + PE +T +K
Sbjct: 134 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 193
Query: 243 TCASDIYSFGIVALQLLS 260
+ ASD++SFG+V +L +
Sbjct: 194 SVASDVWSFGVVLYELFT 211
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 12/198 (6%)
Query: 72 RFLGRGSAGLVYKGVL--PSGQ--VVAIKHI---YKSNNTDSFSREVEGLSRVRHPNLVC 124
+ +G G G V G L P + VAIK + Y F E + + HPN++
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 94
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
L G + ++ E+ G+L L + D T + V +LR ++YL D
Sbjct: 95 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMS 151
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIG--YMDPEYMTNAKL 242
VHRD+ NIL+ L K+SDFG++++L + +T G I + PE + K
Sbjct: 152 AVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 211
Query: 243 TCASDIYSFGIVALQLLS 260
T ASD++S+GIV +++S
Sbjct: 212 TSASDVWSYGIVMWEVMS 229
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 12/198 (6%)
Query: 72 RFLGRGSAGLVYKGVL--PSGQ--VVAIKHI---YKSNNTDSFSREVEGLSRVRHPNLVC 124
+ +G G G V G L P + VAIK + Y F E + + HPN++
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 79
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
L G + ++ E+ G+L L + D T + V +LR ++YL D
Sbjct: 80 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMS 136
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIG--YMDPEYMTNAKL 242
VHRD+ NIL+ L K+SDFG++++L + +T G I + PE + K
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 196
Query: 243 TCASDIYSFGIVALQLLS 260
T ASD++S+GIV +++S
Sbjct: 197 TSASDVWSYGIVMWEVMS 214
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 99/198 (50%), Gaps = 14/198 (7%)
Query: 74 LGRGSAGLV----YKGVLP-SGQVVAIKHIYKSNNTD--SFSREVEGLSRVRHPNLVCLF 126
LG+G+ G V Y + +G+VVA+K + S F RE+E L ++H N+V
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 127 GCCVEGGEQYL--VYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
G C G + L + E+ G+L +L + + +K+L+ + + + +
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID---HIKLLQYTSQICKGMEYLGTKR 138
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM--EESKVFTDVRGTIGYMDPEYMTNAKL 242
+HRD+ NIL+ + K+ DFGL K+L E KV I + PE +T +K
Sbjct: 139 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 198
Query: 243 TCASDIYSFGIVALQLLS 260
+ ASD++SFG+V +L +
Sbjct: 199 SVASDVWSFGVVLYELFT 216
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 99/198 (50%), Gaps = 14/198 (7%)
Query: 74 LGRGSAGLV----YKGVLP-SGQVVAIKHIYKSNNTD--SFSREVEGLSRVRHPNLVCLF 126
LG+G+ G V Y + +G+VVA+K + S F RE+E L ++H N+V
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 127 GCCVEGGEQYL--VYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
G C G + L + E+ G+L +L + + +K+L+ + + + +
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID---HIKLLQYTSQICKGMEYLGTKR 141
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM--EESKVFTDVRGTIGYMDPEYMTNAKL 242
+HRD+ NIL+ + K+ DFGL K+L E KV I + PE +T +K
Sbjct: 142 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 201
Query: 243 TCASDIYSFGIVALQLLS 260
+ ASD++SFG+V +L +
Sbjct: 202 SVASDVWSFGVVLYELFT 219
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 99/198 (50%), Gaps = 14/198 (7%)
Query: 74 LGRGSAGLV----YKGVLP-SGQVVAIKHIYKSNNTD--SFSREVEGLSRVRHPNLVCLF 126
LG+G+ G V Y + +G+VVA+K + S F RE+E L ++H N+V
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 127 GCCVEGGEQYL--VYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
G C G + L + E+ G+L +L + + +K+L+ + + + +
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID---HIKLLQYTSQICKGMEYLGTKR 132
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM--EESKVFTDVRGTIGYMDPEYMTNAKL 242
+HRD+ NIL+ + K+ DFGL K+L E KV I + PE +T +K
Sbjct: 133 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 192
Query: 243 TCASDIYSFGIVALQLLS 260
+ ASD++SFG+V +L +
Sbjct: 193 SVASDVWSFGVVLYELFT 210
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 103/193 (53%), Gaps = 10/193 (5%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHI---YKSNNTDSFSREVEGLSRVRHPNLVCLFGCC 129
+G+GS G V+KG+ + QVVAIK I + + +E+ LS+ + +G
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSY 90
Query: 130 VEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRD 189
++G + +++ E+ G+ A LLR ++ +L++ L YLH +HRD
Sbjct: 91 LKGSKLWIIMEYLGGGS-ALDLLRAGPFDEFQI-ATMLKEILKGLDYLHSEKK---IHRD 145
Query: 190 IKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIY 249
IK N+LL+E+ + KL+DFG+A L + K T V GT +M PE + + +DI+
Sbjct: 146 IKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIQQSAYDSKADIW 204
Query: 250 SFGIVALQLLSGQ 262
S GI A++L G+
Sbjct: 205 SLGITAIELAKGE 217
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 99/198 (50%), Gaps = 14/198 (7%)
Query: 74 LGRGSAGLV----YKGVLP-SGQVVAIKHIYKSNNTD--SFSREVEGLSRVRHPNLVCLF 126
LG+G+ G V Y + +G+VVA+K + S F RE+E L ++H N+V
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 127 GCCVEGGEQYL--VYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
G C G + L + E+ G+L +L + + +K+L+ + + + +
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID---HIKLLQYTSQICKGMEYLGTKR 139
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM--EESKVFTDVRGTIGYMDPEYMTNAKL 242
+HRD+ NIL+ + K+ DFGL K+L E KV I + PE +T +K
Sbjct: 140 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 199
Query: 243 TCASDIYSFGIVALQLLS 260
+ ASD++SFG+V +L +
Sbjct: 200 SVASDVWSFGVVLYELFT 217
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 99/198 (50%), Gaps = 14/198 (7%)
Query: 74 LGRGSAGLV----YKGVLP-SGQVVAIKHIYKSNNTD--SFSREVEGLSRVRHPNLVCLF 126
LG+G+ G V Y + +G+VVA+K + S F RE+E L ++H N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 127 GCCVEGGEQYL--VYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
G C G + L + E+ G+L +L + + +K+L+ + + + +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID---HIKLLQYTSQICKGMEYLGTKR 134
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM--EESKVFTDVRGTIGYMDPEYMTNAKL 242
+HRD+ NIL+ + K+ DFGL K+L E KV I + PE +T +K
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 194
Query: 243 TCASDIYSFGIVALQLLS 260
+ ASD++SFG+V +L +
Sbjct: 195 SVASDVWSFGVVLYELFT 212
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 99/193 (51%), Gaps = 10/193 (5%)
Query: 74 LGRGSAGLVYKGVLPSGQ-VVAIKHI---YKSNNTDSFSREVEGLSRVRHPNLVCLFGCC 129
+G+GS G V+KG+ Q VVAIK I + + +E+ LS+ P + +G
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 94
Query: 130 VEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRD 189
++ + +++ E+ G+ L + L + ILR+ L YLH +HRD
Sbjct: 95 LKDTKLWIIMEYLGGGSALD--LLEPGPLDETQIATILREILKGLDYLHSEKK---IHRD 149
Query: 190 IKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIY 249
IK N+LL+E E KL+DFG+A L + K T V GT +M PE + + +DI+
Sbjct: 150 IKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDSKADIW 208
Query: 250 SFGIVALQLLSGQ 262
S GI A++L G+
Sbjct: 209 SLGITAIELARGE 221
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 99/198 (50%), Gaps = 14/198 (7%)
Query: 74 LGRGSAGLV----YKGVLP-SGQVVAIKHIYKSNNTD--SFSREVEGLSRVRHPNLVCLF 126
LG+G+ G V Y + +G+VVA+K + S F RE+E L ++H N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 127 GCCVEGGEQYL--VYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
G C G + L + E+ G+L +L + + +K+L+ + + + +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID---HIKLLQYTSQICKGMEYLGTKR 137
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM--EESKVFTDVRGTIGYMDPEYMTNAKL 242
+HRD+ NIL+ + K+ DFGL K+L E KV I + PE +T +K
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 197
Query: 243 TCASDIYSFGIVALQLLS 260
+ ASD++SFG+V +L +
Sbjct: 198 SVASDVWSFGVVLYELFT 215
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 12/198 (6%)
Query: 72 RFLGRGSAGLVYKGVL--PSGQ--VVAIKHI---YKSNNTDSFSREVEGLSRVRHPNLVC 124
+ +G G G V G L P + VAIK + Y F E + + HPN++
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 73
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
L G + ++ E+ G+L L + D T + V +LR ++YL D
Sbjct: 74 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMS 130
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIG--YMDPEYMTNAKL 242
VHRD+ NIL+ L K+SDFG++++L + +T G I + PE + K
Sbjct: 131 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 190
Query: 243 TCASDIYSFGIVALQLLS 260
T ASD++S+GIV +++S
Sbjct: 191 TSASDVWSYGIVMWEVMS 208
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 99/198 (50%), Gaps = 14/198 (7%)
Query: 74 LGRGSAGLV----YKGVLP-SGQVVAIKHIYKSNNTD--SFSREVEGLSRVRHPNLVCLF 126
LG+G+ G V Y + +G+VVA+K + S F RE+E L ++H N+V
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 127 GCCVEGGEQYL--VYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
G C G + L + E+ G+L +L + + +K+L+ + + + +
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID---HIKLLQYTSQICKGMEYLGTKR 140
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM--EESKVFTDVRGTIGYMDPEYMTNAKL 242
+HRD+ NIL+ + K+ DFGL K+L E KV I + PE +T +K
Sbjct: 141 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 200
Query: 243 TCASDIYSFGIVALQLLS 260
+ ASD++SFG+V +L +
Sbjct: 201 SVASDVWSFGVVLYELFT 218
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 99/198 (50%), Gaps = 14/198 (7%)
Query: 74 LGRGSAGLV----YKGVLP-SGQVVAIKHIYKSNNTD--SFSREVEGLSRVRHPNLVCLF 126
LG+G+ G V Y + +G+VVA+K + S F RE+E L ++H N+V
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 127 GCCVEGGEQYL--VYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
G C G + L + E+ G+L +L + + +K+L+ + + + +
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID---HIKLLQYTSQICKGMEYLGTKR 165
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM--EESKVFTDVRGTIGYMDPEYMTNAKL 242
+HRD+ NIL+ + K+ DFGL K+L E KV I + PE +T +K
Sbjct: 166 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 225
Query: 243 TCASDIYSFGIVALQLLS 260
+ ASD++SFG+V +L +
Sbjct: 226 SVASDVWSFGVVLYELFT 243
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 108/234 (46%), Gaps = 33/234 (14%)
Query: 71 RRFLGRGSAGLVYKGVLPSGQVVAIKHIYK------SNNTDSFSREVEGLSRVRHPNLVC 124
+G G G VY+ G VA+K S ++ +E + + ++HPN++
Sbjct: 12 EEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHL----LRKDSVLTWERRVKILRDCALALRYLHHY 180
L G C++ LV EF G L + L + D ++ W ++ A + YLH
Sbjct: 71 LRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQI------ARGMNYLHDE 124
Query: 181 IDGCIVHRDIKLTNILLTEKLEP--------KLSDFGLAKMLGMEESKVFTDVRGTIGYM 232
I+HRD+K +NIL+ +K+E K++DFGLA+ G +M
Sbjct: 125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW---HRTTKMSAAGAYAWM 181
Query: 233 DPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGK 286
PE + + + SD++S+G++ +LL+G E+ F D L A V+M K
Sbjct: 182 APEVIRASMFSKGSDVWSYGVLLWELLTG----EVPFRGIDGLA-VAYGVAMNK 230
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 99/198 (50%), Gaps = 14/198 (7%)
Query: 74 LGRGSAGLV----YKGVLP-SGQVVAIKHIYKSNNTD--SFSREVEGLSRVRHPNLVCLF 126
LG+G+ G V Y + +G+VVA+K + S F RE+E L ++H N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 127 GCCVEGGEQYL--VYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
G C G + L + E+ G+L +L + + +K+L+ + + + +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID---HIKLLQYTSQICKGMEYLGTKR 134
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM--EESKVFTDVRGTIGYMDPEYMTNAKL 242
+HRD+ NIL+ + K+ DFGL K+L E KV I + PE +T +K
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 194
Query: 243 TCASDIYSFGIVALQLLS 260
+ ASD++SFG+V +L +
Sbjct: 195 SVASDVWSFGVVLYELFT 212
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ-VVAIKHIYKSNNTDS-----FSREVEGLSRVRHPNLVCL 125
R LG+G G VY + ++A+K ++K+ + REVE S +RHPN++ L
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+G + YL+ E+ G + + L+K S +R + + A AL Y H +
Sbjct: 100 YGYFHDATRVYLILEYAPLGTVYRE-LQKLSKFDEQRTATYITELANALSYCH---SKRV 155
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
+HRDIK N+LL E K++DFG + S D+ GT+ Y+ PE +
Sbjct: 156 IHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRDDLCGTLDYLPPEMIEGRMHDEK 212
Query: 246 SDIYSFGIVALQLLSGQKVIE-------------LDFDARDQLTRKARDV 282
D++S G++ + L G+ E ++F D +T ARD+
Sbjct: 213 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDL 262
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 28/208 (13%)
Query: 74 LGRGSAGLVYKGVL----PSGQVVAIKHI----YKSNNTDSFSREVEGLSRVRHPNLVCL 125
+G GS G K +L G+ IK I S + REV L+ ++HPN+V
Sbjct: 32 IGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQY 88
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQH-------LLRKDSVLTWERRVKILRDCALALRYLH 178
E G Y+V ++C G+L + L ++D +L W ++ C LAL+++H
Sbjct: 89 RESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDW-----FVQIC-LALKHVH 142
Query: 179 HYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMT 238
D I+HRDIK NI LT+ +L DFG+A++L ++ GT Y+ PE
Sbjct: 143 ---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLN-STVELARACIGTPYYLSPEICE 198
Query: 239 NAKLTCASDIYSFGIVALQLLSGQKVIE 266
N SDI++ G V +L + + E
Sbjct: 199 NKPYNNKSDIWALGCVLYELCTLKHAFE 226
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ-VVAIKHIYKSNNTDS-----FSREVEGLSRVRHPNLVCL 125
R LG+G G VY + ++A+K ++K+ + REVE S +RHPN++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+G + YL+ E+ G + + L+K S +R + + A AL Y H +
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRE-LQKLSKFDEQRTATYITELANALSYCH---SKRV 132
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
+HRDIK N+LL E K++DFG + S D+ GT+ Y+ PE +
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRDDLCGTLDYLPPEMIEGRMHDEK 189
Query: 246 SDIYSFGIVALQLLSGQKVIE-------------LDFDARDQLTRKARDV 282
D++S G++ + L G+ E ++F D +T ARD+
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDL 239
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 116/280 (41%), Gaps = 33/280 (11%)
Query: 74 LGRGSAGLVYKGVLPSG----QVVAIKHI---YKSNNTDSFSREVEGLSRVRHPNLVCLF 126
+G G G V +G L + VAIK + Y F E + + HPN++ L
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 127 GCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIV 186
G ++ EF G L L D T + V +LR A +RYL V
Sbjct: 84 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEM---SYV 140
Query: 187 HRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIG------YMDPEYMTNA 240
HRD+ NIL+ L K+SDFGL++ L EE+ ++G + PE +
Sbjct: 141 HRDLAARNILVNSNLVCKVSDFGLSRFL--EENSSDPTETSSLGGKIPIRWTAPEAIAFR 198
Query: 241 KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGN 300
K T ASD +S+GIV +++S + D +D + +D + P + P
Sbjct: 199 KFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPP----DCP----- 249
Query: 301 INRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWKN 340
S+ ++ + C K RP V +DK +N
Sbjct: 250 ------TSLHQLMLDCWQKDRNARPRFPQVVSALDKMIRN 283
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 99/198 (50%), Gaps = 14/198 (7%)
Query: 74 LGRGSAGLV----YKGVLP-SGQVVAIKHIYKSNNTD--SFSREVEGLSRVRHPNLVCLF 126
LG+G+ G V Y + +G+VVA+K + S F RE+E L ++H N+V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 127 GCCVEGGEQYL--VYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
G C G + L + E+ G+L +L + + +K+L+ + + + +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID---HIKLLQYTSQICKGMEYLGTKR 152
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM--EESKVFTDVRGTIGYMDPEYMTNAKL 242
+HRD+ NIL+ + K+ DFGL K+L E KV I + PE +T +K
Sbjct: 153 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 212
Query: 243 TCASDIYSFGIVALQLLS 260
+ ASD++SFG+V +L +
Sbjct: 213 SVASDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 90/178 (50%), Gaps = 9/178 (5%)
Query: 89 SGQVVAIKHIYKSNNTD--SFSREVEGLSRVRHPNLVCLFGCCVEGGEQYL--VYEFCAA 144
+G+VVA+K + S F RE+E L ++H N+V G C G + L + E+
Sbjct: 56 TGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 115
Query: 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPK 204
G+L +L + + +K+L+ + + + + +HRD+ NIL+ + K
Sbjct: 116 GSLRDYLQKHKERID---HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 172
Query: 205 LSDFGLAKMLGM--EESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
+ DFGL K+L E KV I + PE +T +K + ASD++SFG+V +L +
Sbjct: 173 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 100/194 (51%), Gaps = 12/194 (6%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTD--SFSREVEGLSRVRHPNLVCLFGCCV 130
LG G+ G+V++ +G A K + + +D + +E++ +S +RHP LV L
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 131 EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDI 190
+ E ++YEF + G L + + + + ++ + V+ +R L ++H + VH D+
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDL 175
Query: 191 KLTNILLTEKL--EPKLSDFGLAKMLGMEES-KVFTDVRGTIGYMDPEYMTNAKLTCASD 247
K NI+ T K E KL DFGL L ++S KV T GT + PE + +D
Sbjct: 176 KPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYYTD 232
Query: 248 IYSFGIVALQLLSG 261
++S G+++ LLSG
Sbjct: 233 MWSVGVLSYILLSG 246
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ-VVAIKHIYKSNNTDS-----FSREVEGLSRVRHPNLVCL 125
R LG+G G VY + ++A+K ++K+ + REVE S +RHPN++ L
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+G + YL+ E+ G + + L+K S +R + + A AL Y H +
Sbjct: 100 YGYFHDATRVYLILEYAPLGTVYRE-LQKLSKFDEQRTATYITELANALSYCH---SKRV 155
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
+HRDIK N+LL E K++DFG + S T + GT+ Y+ PE +
Sbjct: 156 IHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPPEMIEGRMHDEK 212
Query: 246 SDIYSFGIVALQLLSGQKVIE-------------LDFDARDQLTRKARDV 282
D++S G++ + L G+ E ++F D +T ARD+
Sbjct: 213 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDL 262
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ-VVAIKHIYKSNNTDS-----FSREVEGLSRVRHPNLVCL 125
R LG+G G VY + ++A+K ++K+ + REVE S +RHPN++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+G + YL+ E+ G + + L+K S +R + + A AL Y H +
Sbjct: 79 YGYFHDATRVYLILEYAPRGEVYKE-LQKLSKFDEQRTATYITELANALSYCH---SKRV 134
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
+HRDIK N+LL E K++DFG + S T + GT+ Y+ PE +
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVHA---PSSRRTTLCGTLDYLPPEMIEGRMHDEK 191
Query: 246 SDIYSFGIVALQLLSGQKVIE-------------LDFDARDQLTRKARDV 282
D++S G++ + L G+ E ++F D +T ARD+
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDL 241
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ-VVAIKHIYKSNNTDS-----FSREVEGLSRVRHPNLVCL 125
R LG+G G VY + ++A+K ++K+ + REVE S +RHPN++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+G + YL+ E+ G + + L+K S +R + + A AL Y H +
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRE-LQKLSKFDEQRTATYITELANALSYCH---SKRV 132
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
+HRDIK N+LL E K++DFG + S T + GT+ Y+ PE +
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 189
Query: 246 SDIYSFGIVALQLLSGQKVIE-------------LDFDARDQLTRKARDV 282
D++S G++ + L G+ E ++F D +T ARD+
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDL 239
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ-VVAIKHIYKSNNTDS-----FSREVEGLSRVRHPNLVCL 125
R LG+G G VY + ++A+K ++K+ + REVE S +RHPN++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+G + YL+ E+ G + + L+K S +R + + A AL Y H +
Sbjct: 79 YGYFHDATRVYLILEYAPLGTVYRE-LQKLSKFDEQRTATYITELANALSYCH---SKRV 134
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
+HRDIK N+LL E K++DFG + S T + GT+ Y+ PE +
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVHA---PSSRRTTLCGTLDYLPPEXIEGRXHDEK 191
Query: 246 SDIYSFGIVALQLLSGQKVIE-------------LDFDARDQLTRKARDV 282
D++S G++ + L G+ E ++F D +T ARD+
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDL 241
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 112/234 (47%), Gaps = 28/234 (11%)
Query: 72 RFLGRGSAGLVYK----GVLPSGQVVAIKHIYKS----NNTDSFSREVEG--LSRVRHPN 121
R LG+G G V++ +G++ A+K + K+ N D+ + E L V+HP
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 122 LVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYI 181
+V L GG+ YL+ E+ + G L L R + + + L + ++AL +LH
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLER-EGIFMEDTACFYLAEISMALGHLHQK- 140
Query: 182 DGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAK 241
I++RD+K NI+L + KL+DFGL K + + V GTI YM PE + +
Sbjct: 141 --GIIYRDLKPENIMLNHQGHVKLTDFGLCKE-SIHDGTVTHTFCGTIEYMAPEILMRSG 197
Query: 242 LTCASDIYSFGIVALQLLSG-------------QKVIELDFDARDQLTRKARDV 282
A D +S G + +L+G K+++ + LT++ARD+
Sbjct: 198 HNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDL 251
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ-VVAIKHIYKSNNTDS-----FSREVEGLSRVRHPNLVCL 125
R LG+G G VY + ++A+K ++K+ + REVE S +RHPN++ L
Sbjct: 13 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 72
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+G + YL+ E+ G + + L+K S +R + + A AL Y H +
Sbjct: 73 YGYFHDATRVYLILEYAPLGTVYRE-LQKLSKFDEQRTATYITELANALSYCH---SKRV 128
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
+HRDIK N+LL E K++DFG + S T + GT+ Y+ PE +
Sbjct: 129 IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 185
Query: 246 SDIYSFGIVALQLLSGQKVIE-------------LDFDARDQLTRKARDV 282
D++S G++ + L G+ E ++F D +T ARD+
Sbjct: 186 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDL 235
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ-VVAIKHIYKSNNTDS-----FSREVEGLSRVRHPNLVCL 125
R LG+G G VY + ++A+K ++K+ + REVE S +RHPN++ L
Sbjct: 18 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+G + YL+ E+ G + + L+K S +R + + A AL Y H +
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRE-LQKLSKFDEQRTATYITELANALSYCH---SKRV 133
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
+HRDIK N+LL E K++DFG + S T + GT+ Y+ PE +
Sbjct: 134 IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 190
Query: 246 SDIYSFGIVALQLLSGQKVIE-------------LDFDARDQLTRKARDV 282
D++S G++ + L G+ E ++F D +T ARD+
Sbjct: 191 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDL 240
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 112/234 (47%), Gaps = 28/234 (11%)
Query: 72 RFLGRGSAGLVYK----GVLPSGQVVAIKHIYKS----NNTDSFSREVEG--LSRVRHPN 121
R LG+G G V++ +G++ A+K + K+ N D+ + E L V+HP
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 122 LVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYI 181
+V L GG+ YL+ E+ + G L L R + + + L + ++AL +LH
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLER-EGIFMEDTACFYLAEISMALGHLHQK- 140
Query: 182 DGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAK 241
I++RD+K NI+L + KL+DFGL K + + V GTI YM PE + +
Sbjct: 141 --GIIYRDLKPENIMLNHQGHVKLTDFGLCKE-SIHDGTVTHXFCGTIEYMAPEILMRSG 197
Query: 242 LTCASDIYSFGIVALQLLSG-------------QKVIELDFDARDQLTRKARDV 282
A D +S G + +L+G K+++ + LT++ARD+
Sbjct: 198 HNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDL 251
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 117/267 (43%), Gaps = 37/267 (13%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYK-SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG G AG V+ G VA+K + + S + D+F E + +++H LV L+ +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSV-LTWERRVKILRDCALALRYLHHYIDGCIVHRDIK 191
Y++ E+ G+L L + LT + + + A + ++ + +HRD++
Sbjct: 81 -PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 136
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
NIL+++ L K++DFGLA+++ E + I + PE + T SD++SF
Sbjct: 137 AANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 196
Query: 252 GIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRAD------ 305
GI+ ++ V+ G+ P +P + N+ R
Sbjct: 197 GILLTEI-----------------------VTHGRIPYPGMTNPEVIQNLERGYRMVRPD 233
Query: 306 --FESILKIAVLCVAKSSKGRPTIDVV 330
E + ++ LC + + RPT D +
Sbjct: 234 NCPEELYQLMRLCWKERPEDRPTFDYL 260
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ-VVAIKHIYKSNNTDS-----FSREVEGLSRVRHPNLVCL 125
R LG+G G VY + ++A+K ++K+ + REVE S +RHPN++ L
Sbjct: 31 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 90
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+G + YL+ E+ G + + L+K S +R + + A AL Y H +
Sbjct: 91 YGYFHDATRVYLILEYAPLGTVYRE-LQKLSKFDEQRTATYITELANALSYCH---SKRV 146
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
+HRDIK N+LL E K++DFG + S T + GT+ Y+ PE +
Sbjct: 147 IHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPPEMIEGRMHDEK 203
Query: 246 SDIYSFGIVALQLLSGQKVIE-------------LDFDARDQLTRKARDV 282
D++S G++ + L G+ E ++F D +T ARD+
Sbjct: 204 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDL 253
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 72 RFLGRGSAGLVYKG--VLPSGQ--VVAIKHI---YKSNNTDSFSREVEGLSRVRHPNLVC 124
+ +G G G V G LP + VAIK + Y F E + + HPN++
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
L G + ++ EF G+L L + D T + V +LR A ++YL D
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADMN 129
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES-KVFTDVRG---TIGYMDPEYMTNA 240
VHR + NIL+ L K+SDFGL++ L + S +T G I + PE +
Sbjct: 130 YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYR 189
Query: 241 KLTCASDIYSFGIVALQLLS 260
K T ASD++S+GIV +++S
Sbjct: 190 KFTSASDVWSYGIVMWEVMS 209
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ-VVAIKHIYKSNNTDS-----FSREVEGLSRVRHPNLVCL 125
R LG+G G VY + ++A+K ++K+ + REVE S +RHPN++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+G + YL+ E+ G + + L+K S +R + + A AL Y H +
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRE-LQKLSKFDEQRTATYITELANALSYCH---SKRV 132
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
+HRDIK N+LL E K++DFG + S T + GT+ Y+ PE +
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 189
Query: 246 SDIYSFGIVALQLLSGQKVIE-------------LDFDARDQLTRKARDV 282
D++S G++ + L G+ E ++F D +T ARD+
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDL 239
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 100/198 (50%), Gaps = 14/198 (7%)
Query: 74 LGRGSAGLV----YKGVLP-SGQVVAIKHIYKSNNTD--SFSREVEGLSRVRHPNLVCLF 126
LG+G+ G V Y + +G+VVA+K + S F RE+E L ++H N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 127 GCCVEGGEQYL--VYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
G C G + L + E+ G+L +L + + +K+L+ + + + +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID---HIKLLQYTSQICKGMEYLGTKR 134
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES--KVFTDVRGTIGYMDPEYMTNAKL 242
+HRD+ NIL+ + K+ DFGL K+L ++ KV I + PE +T +K
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKF 194
Query: 243 TCASDIYSFGIVALQLLS 260
+ ASD++SFG+V +L +
Sbjct: 195 SVASDVWSFGVVLYELFT 212
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ-VVAIKHIYKSNNTDS-----FSREVEGLSRVRHPNLVCL 125
R LG+G G VY + ++A+K ++K+ + REVE S +RHPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+G + YL+ E+ G + + L+K S +R + + A AL Y H +
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRE-LQKLSKFDEQRTATYITELANALSYCH---SKRV 129
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
+HRDIK N+LL E K++DFG + S T + GT+ Y+ PE +
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 186
Query: 246 SDIYSFGIVALQLLSGQKVIE-------------LDFDARDQLTRKARDV 282
D++S G++ + L G+ E ++F D +T ARD+
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDL 236
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ-VVAIKHIYKSNNTDS-----FSREVEGLSRVRHPNLVCL 125
R LG+G G VY + ++A+K ++K+ + REVE S +RHPN++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+G + YL+ E+ G + + L+K S +R + + A AL Y H +
Sbjct: 79 YGYFHDATRVYLILEYAPLGTVYRE-LQKLSKFDEQRTATYITELANALSYCH---SKRV 134
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
+HRDIK N+LL E K++DFG + S T + GT+ Y+ PE +
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 191
Query: 246 SDIYSFGIVALQLLSGQKVIE-------------LDFDARDQLTRKARDV 282
D++S G++ + L G+ E ++F D +T ARD+
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDL 241
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 100/194 (51%), Gaps = 12/194 (6%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTD--SFSREVEGLSRVRHPNLVCLFGCCV 130
LG G+ G+V++ +G A K + + +D + +E++ +S +RHP LV L
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 131 EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDI 190
+ E ++YEF + G L + + + + ++ + V+ +R L ++H + VH D+
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDL 281
Query: 191 KLTNILLTEKL--EPKLSDFGLAKMLGMEES-KVFTDVRGTIGYMDPEYMTNAKLTCASD 247
K NI+ T K E KL DFGL L ++S KV T GT + PE + +D
Sbjct: 282 KPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYYTD 338
Query: 248 IYSFGIVALQLLSG 261
++S G+++ LLSG
Sbjct: 339 MWSVGVLSYILLSG 352
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ-VVAIKHIYKSNNTDS-----FSREVEGLSRVRHPNLVCL 125
R LG+G G VY + ++A+K ++K+ + REVE S +RHPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+G + YL+ E+ G + + L+K S +R + + A AL Y H +
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRE-LQKLSKFDEQRTATYITELANALSYCH---SKRV 129
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
+HRDIK N+LL E K++DFG + S T + GT+ Y+ PE +
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTXLCGTLDYLPPEMIEGRMHDEK 186
Query: 246 SDIYSFGIVALQLLSGQKVIE-------------LDFDARDQLTRKARDV 282
D++S G++ + L G+ E ++F D +T ARD+
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDL 236
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 106/211 (50%), Gaps = 36/211 (17%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIKHIYKS---NNTDSFSREVEGLSRVRHPNLVCLFGCC 129
LG G G V + + +G+ VAIK + N + + E++ + ++ HPN+V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE-- 80
Query: 130 VEGGEQ--------YLVYEFCAAGNLAQHL--------LRKDSVLTWERRVKILRDCALA 173
V G Q L E+C G+L ++L L++ + T +L D + A
Sbjct: 81 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT------LLSDISSA 134
Query: 174 LRYLHHYIDGCIVHRDIKLTNILLT---EKLEPKLSDFGLAKMLGMEESKVFTDVRGTIG 230
LRYLH + I+HRD+K NI+L ++L K+ D G AK L ++ ++ T+ GT+
Sbjct: 135 LRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQ 189
Query: 231 YMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
Y+ PE + K T D +SFG +A + ++G
Sbjct: 190 YLAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 121/265 (45%), Gaps = 25/265 (9%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYK-SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG G G+V G VAIK I + S + D F E + + + H LV L+G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 76
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKL 192
+++ E+ A G L +L ++ +++ +D A+ YL +HRD+
Sbjct: 77 RPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAA 133
Query: 193 TNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGT---IGYMDPEYMTNAKLTCASDIY 249
N L+ ++ K+SDFGL++ + +E +T RG+ + + PE + +K + SDI+
Sbjct: 134 RNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSRGSKFPVRWSPPEVLMYSKFSSKSDIW 190
Query: 250 SFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESI 309
+FG++ ++ S K+ F + A ++ G R + P L E +
Sbjct: 191 AFGVLMWEIYSLGKMPYERFTN----SETAEHIAQGLRLYR----PHLAS-------EKV 235
Query: 310 LKIAVLCVAKSSKGRPTIDVVYEEI 334
I C + + RPT ++ I
Sbjct: 236 YTIMYSCWHEKADERPTFKILLSNI 260
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 106/211 (50%), Gaps = 36/211 (17%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIKHIYKS---NNTDSFSREVEGLSRVRHPNLVCLFGCC 129
LG G G V + + +G+ VAIK + N + + E++ + ++ HPN+V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE-- 79
Query: 130 VEGGEQ--------YLVYEFCAAGNLAQHL--------LRKDSVLTWERRVKILRDCALA 173
V G Q L E+C G+L ++L L++ + T +L D + A
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT------LLSDISSA 133
Query: 174 LRYLHHYIDGCIVHRDIKLTNILLT---EKLEPKLSDFGLAKMLGMEESKVFTDVRGTIG 230
LRYLH + I+HRD+K NI+L ++L K+ D G AK L ++ ++ T+ GT+
Sbjct: 134 LRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQ 188
Query: 231 YMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
Y+ PE + K T D +SFG +A + ++G
Sbjct: 189 YLAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 32/214 (14%)
Query: 74 LGRGSAGLVYKGVL--PSG----QVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVC 124
LG G VYKG L P+ Q VAIK + + F E +R++HPN+VC
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKD---------------SVLTWERRVKILRD 169
L G + +++ +C+ G+L + L+ + S L V ++
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 153
Query: 170 CALALRYL--HHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAK-MLGMEESKVFTDVR 226
A + YL HH +VH+D+ N+L+ +KL K+SD GL + + + K+ +
Sbjct: 154 IAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 208
Query: 227 GTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
I +M PE + K + SDI+S+G+V ++ S
Sbjct: 209 LPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 81/180 (45%), Gaps = 19/180 (10%)
Query: 93 VAIKHIY-----KSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNL 147
VAIK I+ K F REV S++ H N+V + E YLV E+ L
Sbjct: 39 VAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTL 98
Query: 148 AQHL-----LRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLE 202
++++ L D+ + + ++ L + H D IVHRDIK NIL+
Sbjct: 99 SEYIESHGPLSVDTAINFTNQI---------LDGIKHAHDMRIVHRDIKPQNILIDSNKT 149
Query: 203 PKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQ 262
K+ DFG+AK L V GT+ Y PE +DIYS GIV ++L G+
Sbjct: 150 LKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 32/214 (14%)
Query: 74 LGRGSAGLVYKGVL--PSG----QVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVC 124
LG G VYKG L P+ Q VAIK + + F E +R++HPN+VC
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKD---------------SVLTWERRVKILRD 169
L G + +++ +C+ G+L + L+ + S L V ++
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 170 CALALRYL--HHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAK-MLGMEESKVFTDVR 226
A + YL HH +VH+D+ N+L+ +KL K+SD GL + + + K+ +
Sbjct: 137 IAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 191
Query: 227 GTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
I +M PE + K + SDI+S+G+V ++ S
Sbjct: 192 LPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 116/259 (44%), Gaps = 21/259 (8%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG+G G V+ G VAIK + + ++F +E + + ++RH LV L+ E
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 78
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC-IVHRDIK 191
Y+V E+ + G+L L + R+ L D A + Y++ VHRD++
Sbjct: 79 -PIYIVTEYMSKGSLLDFLKGETGKYL---RLPQLVDMAAQIASGMAYVERMNYVHRDLR 134
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
NIL+ E L K++DFGLA+++ E + I + PE + T SD++SF
Sbjct: 135 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 194
Query: 252 GIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILK 311
GI+ +L + +V R+ L + R M P E P ES+
Sbjct: 195 GILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP----ECP-----------ESLHD 239
Query: 312 IAVLCVAKSSKGRPTIDVV 330
+ C K + RPT + +
Sbjct: 240 LMCQCWRKEPEERPTFEYL 258
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 107/230 (46%), Gaps = 26/230 (11%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ-VVAIKHIYKSNNTDS-----FSREVEGLSRVRHPNLVCL 125
R LG+G G VY + ++A+K ++K+ + REVE S +RHPN++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+G + YL+ E+ G + + L+K S +R + + A AL Y H +
Sbjct: 79 YGYFHDATRVYLILEYAPRGEVYKE-LQKLSKFDEQRTATYITELANALSYCH---SKRV 134
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
+HRDIK N+LL E K++DFG + S + GT+ Y+ PE +
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVHA---PSSRRXXLXGTLDYLPPEMIEGRMHDEK 191
Query: 246 SDIYSFGIVALQLLSGQKVIE-------------LDFDARDQLTRKARDV 282
D++S G++ + L G+ E ++F D +T ARD+
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDL 241
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 106/230 (46%), Gaps = 26/230 (11%)
Query: 72 RFLGRGSAGLVY------KGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCL 125
R LG+G G VY + + + +V+ + K+ REVE S +RHPN++ L
Sbjct: 11 RPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 70
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+G + YL+ E+ G + + L+K S +R + + A AL Y H +
Sbjct: 71 YGYFHDATRVYLILEYAPLGTVYRE-LQKLSKFDEQRTATYITELANALSYCH---SKRV 126
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
+HRDIK N+LL E K++DFG + S T + GT+ Y+ PE +
Sbjct: 127 IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 183
Query: 246 SDIYSFGIVALQLLSGQKVIE-------------LDFDARDQLTRKARDV 282
D++S G++ + L G+ E ++F D +T ARD+
Sbjct: 184 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDL 233
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 116/259 (44%), Gaps = 21/259 (8%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG+G G V+ G VAIK + + ++F +E + + ++RH LV L+ E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 251
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC-IVHRDIK 191
Y+V E+ + G+L L + R+ L D A + Y++ VHRD++
Sbjct: 252 -PIYIVTEYMSKGSLLDFLKGETGKYL---RLPQLVDMAAQIASGMAYVERMNYVHRDLR 307
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
NIL+ E L K++DFGLA+++ E + I + PE + T SD++SF
Sbjct: 308 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 367
Query: 252 GIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILK 311
GI+ +L + +V R+ L + R M P E P ES+
Sbjct: 368 GILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP----ECP-----------ESLHD 412
Query: 312 IAVLCVAKSSKGRPTIDVV 330
+ C K + RPT + +
Sbjct: 413 LMCQCWRKEPEERPTFEYL 431
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 116/259 (44%), Gaps = 21/259 (8%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG+G G V+ G VAIK + + ++F +E + + ++RH LV L+ E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSEE 85
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC-IVHRDIK 191
Y+V E+ + G+L L + R+ L D A + Y++ VHRD++
Sbjct: 86 -PIYIVTEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 141
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
NIL+ E L K++DFGLA+++ E + I + PE + T SD++SF
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 252 GIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILK 311
GI+ +L + +V R+ L + R M P E P ES+
Sbjct: 202 GILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP----ECP-----------ESLHD 246
Query: 312 IAVLCVAKSSKGRPTIDVV 330
+ C K + RPT + +
Sbjct: 247 LMCQCWRKDPEERPTFEYL 265
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 116/259 (44%), Gaps = 21/259 (8%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG+G G V+ G VAIK + + ++F +E + + ++RH LV L+ E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 251
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC-IVHRDIK 191
Y+V E+ + G+L L + R+ L D A + Y++ VHRD++
Sbjct: 252 -PIYIVTEYMSKGSLLDFLKGETGKYL---RLPQLVDMAAQIASGMAYVERMNYVHRDLR 307
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
NIL+ E L K++DFGLA+++ E + I + PE + T SD++SF
Sbjct: 308 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 367
Query: 252 GIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILK 311
GI+ +L + +V R+ L + R M P E P ES+
Sbjct: 368 GILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP----ECP-----------ESLHD 412
Query: 312 IAVLCVAKSSKGRPTIDVV 330
+ C K + RPT + +
Sbjct: 413 LMCQCWRKEPEERPTFEYL 431
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 116/259 (44%), Gaps = 21/259 (8%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG+G G V+ G VAIK + N + ++F +E + + ++RH LV L+ E
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 252
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC-IVHRDIK 191
Y+V E+ + G+L L + R+ L D A + Y++ VHRD++
Sbjct: 253 -PIYIVTEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 308
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
NIL+ E L K++DFGL +++ E + I + PE + T SD++SF
Sbjct: 309 AANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 368
Query: 252 GIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILK 311
GI+ +L + +V R+ L + R M P E P ES+
Sbjct: 369 GILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP----ECP-----------ESLHD 413
Query: 312 IAVLCVAKSSKGRPTIDVV 330
+ C K + RPT + +
Sbjct: 414 LMCQCWRKDPEERPTFEYL 432
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 98/193 (50%), Gaps = 10/193 (5%)
Query: 74 LGRGSAGLVYKGVLPSGQ-VVAIKHI---YKSNNTDSFSREVEGLSRVRHPNLVCLFGCC 129
+G+GS G V+KG+ Q VVAIK I + + +E+ LS+ P + +G
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 89
Query: 130 VEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRD 189
++ + +++ E+ G+ L + L + ILR+ L YLH +HRD
Sbjct: 90 LKDTKLWIIMEYLGGGSALD--LLEPGPLDETQIATILREILKGLDYLHSEKK---IHRD 144
Query: 190 IKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIY 249
IK N+LL+E E KL+DFG+A L + K V GT +M PE + + +DI+
Sbjct: 145 IKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDSKADIW 203
Query: 250 SFGIVALQLLSGQ 262
S GI A++L G+
Sbjct: 204 SLGITAIELARGE 216
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 109/230 (47%), Gaps = 26/230 (11%)
Query: 72 RFLGRGSAGLVYKG-VLPSGQVVAIKHIYKSNNTDS-----FSREVEGLSRVRHPNLVCL 125
R LG+G G VY S ++A+K ++K+ + REVE S +RHPN++ L
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+G + YL+ E+ G + + L+K S +R + + A AL Y H +
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRE-LQKLSRFDEQRTATYITELANALSYCH---SKRV 133
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
+HRDIK N+LL E K++DFG + S T + GT+ Y+ PE +
Sbjct: 134 IHRDIKPENLLLGSNGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 190
Query: 246 SDIYSFGIVALQLLSG-------------QKVIELDFDARDQLTRKARDV 282
D++S G++ + L G +++ ++F D +T ARD+
Sbjct: 191 VDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDL 240
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 20/197 (10%)
Query: 74 LGRGSAGLVYKGVLPSGQV-VAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY+GV + VA+K + + + F +E + ++HPNLV L G C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI------ 185
Y++ EF GNL +L R A+ L Y+ I +
Sbjct: 79 EPPFYIITEFMTYGNLLDYL----------RECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 186 --VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLT 243
+HRD+ N L+ E K++DFGL++++ + + I + PE + K +
Sbjct: 129 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFS 188
Query: 244 CASDIYSFGIVALQLLS 260
SD+++FG++ ++ +
Sbjct: 189 IKSDVWAFGVLLWEIAT 205
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 20/197 (10%)
Query: 74 LGRGSAGLVYKGVLPSGQV-VAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY+GV + VA+K + + + F +E + ++HPNLV L G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI------ 185
Y++ EF GNL +L R A+ L Y+ I +
Sbjct: 79 EPPFYIIIEFMTYGNLLDYL----------RECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 186 --VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLT 243
+HRD+ N L+ E K++DFGL++++ + + I + PE + K +
Sbjct: 129 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFS 188
Query: 244 CASDIYSFGIVALQLLS 260
SD+++FG++ ++ +
Sbjct: 189 IKSDVWAFGVLLWEIAT 205
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 14/198 (7%)
Query: 74 LGRGSAGLV----YKGVLP-SGQVVAIKHIYKSNNTD--SFSREVEGLSRVRHPNLVCLF 126
LG+G+ G V Y + +G+VVA+K + S F RE+E L ++H N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 127 GCCVEGGEQYL--VYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
G C G + L + E+ G+L +L + +K+L+ + + + +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERID---HIKLLQYTSQICKGMEYLGTKR 137
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM--EESKVFTDVRGTIGYMDPEYMTNAKL 242
+HRD+ NIL+ + K+ DFGL K+L E KV I + PE +T +K
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 197
Query: 243 TCASDIYSFGIVALQLLS 260
+ ASD++SFG+V +L +
Sbjct: 198 SVASDVWSFGVVLYELFT 215
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 116/259 (44%), Gaps = 21/259 (8%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG+G G V+ G VAIK + + ++F +E + + ++RH LV L+ E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC-IVHRDIK 191
Y+V E+ + G+L L + R+ L D A + Y++ VHRD++
Sbjct: 86 -PIYIVIEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 141
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
NIL+ E L K++DFGLA+++ E + I + PE + T SD++SF
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 252 GIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILK 311
GI+ +L + +V R+ L + R M P E P ES+
Sbjct: 202 GILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP----ECP-----------ESLHD 246
Query: 312 IAVLCVAKSSKGRPTIDVV 330
+ C K + RPT + +
Sbjct: 247 LMCQCWRKDPEERPTFEYL 265
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
Query: 74 LGRGSAGLVYKGVLPSGQV-VAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY+GV + VA+K + + + F +E + ++HPNLV L G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG-CIVHRDI 190
Y++ EF GNL +L + E +L A + Y++ +HRD+
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQ---EVNAVVLLYMATQISSAMEYLEKKNFIHRDL 142
Query: 191 KLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYS 250
N L+ E K++DFGL++++ + + I + PE + K + SD+++
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 202
Query: 251 FGIVALQLLS 260
FG++ ++ +
Sbjct: 203 FGVLLWEIAT 212
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 98/193 (50%), Gaps = 10/193 (5%)
Query: 74 LGRGSAGLVYKGVLPSGQ-VVAIKHI---YKSNNTDSFSREVEGLSRVRHPNLVCLFGCC 129
+G+GS G V+KG+ Q VVAIK I + + +E+ LS+ P + +G
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 130 VEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRD 189
++ + +++ E+ G+ L + L + ILR+ L YLH +HRD
Sbjct: 75 LKDTKLWIIMEYLGGGSALD--LLEPGPLDETQIATILREILKGLDYLHSEKK---IHRD 129
Query: 190 IKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIY 249
IK N+LL+E E KL+DFG+A L + K V GT +M PE + + +DI+
Sbjct: 130 IKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDSKADIW 188
Query: 250 SFGIVALQLLSGQ 262
S GI A++L G+
Sbjct: 189 SLGITAIELARGE 201
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
Query: 74 LGRGSAGLVYKGVLPSGQV-VAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY+GV + VA+K + + + F +E + ++HPNLV L G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG-CIVHRDI 190
Y++ EF GNL +L + E +L A + Y++ +HRD+
Sbjct: 82 EPPFYIIIEFMTYGNLLDYLRECNRQ---EVNAVVLLYMATQISSAMEYLEKKNFIHRDL 138
Query: 191 KLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYS 250
N L+ E K++DFGL++++ + + I + PE + K + SD+++
Sbjct: 139 AARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 198
Query: 251 FGIVALQLLS 260
FG++ ++ +
Sbjct: 199 FGVLLWEIAT 208
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 117/262 (44%), Gaps = 19/262 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYK-SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG G G+V G VAIK I + S + D F E + + + H LV L+G C +
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 75
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKL 192
+++ E+ A G L +L ++ +++ +D A+ YL +HRD+
Sbjct: 76 RPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAA 132
Query: 193 TNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFG 252
N L+ ++ K+SDFGL++ + +E + + + PE + +K + SDI++FG
Sbjct: 133 RNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 192
Query: 253 IVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKI 312
++ ++ S K+ F + A ++ G R + P L E + I
Sbjct: 193 VLMWEIYSLGKMPYERFTN----SETAEHIAQGLRLYR----PHLAS-------EKVYTI 237
Query: 313 AVLCVAKSSKGRPTIDVVYEEI 334
C + + RPT ++ I
Sbjct: 238 MYSCWHEKADERPTFKILLSNI 259
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 116/259 (44%), Gaps = 21/259 (8%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG+G G V+ G VAIK + + ++F +E + + ++RH LV L+ E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 251
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC-IVHRDIK 191
Y+V E+ + G+L L + R+ L D A + Y++ VHRD++
Sbjct: 252 -PIYIVGEYMSKGSLLDFLKGETGKYL---RLPQLVDMAAQIASGMAYVERMNYVHRDLR 307
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
NIL+ E L K++DFGLA+++ E + I + PE + T SD++SF
Sbjct: 308 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 367
Query: 252 GIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILK 311
GI+ +L + +V R+ L + R M P E P ES+
Sbjct: 368 GILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP----ECP-----------ESLHD 412
Query: 312 IAVLCVAKSSKGRPTIDVV 330
+ C K + RPT + +
Sbjct: 413 LMCQCWRKEPEERPTFEYL 431
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ-VVAIKHIYKSNNTDS-----FSREVEGLSRVRHPNLVCL 125
R LG+G G VY + ++A+K ++K+ + REVE S +RHPN++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+G + YL+ E+ G + + L+K S +R + + A AL Y H +
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRE-LQKLSKFDEQRTATYITELANALSYCH---SKRV 132
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
+HRDIK N+LL E K+++FG + S T + GT+ Y+ PE +
Sbjct: 133 IHRDIKPENLLLGSAGELKIANFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 189
Query: 246 SDIYSFGIVALQLLSGQKVIE-------------LDFDARDQLTRKARDV 282
D++S G++ + L G+ E ++F D +T ARD+
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDL 239
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 116/259 (44%), Gaps = 21/259 (8%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG+G G V+ G VAIK + + ++F +E + + ++RH LV L+ E
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 76
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC-IVHRDIK 191
Y+V E+ + G+L L + R+ L D A + Y++ VHRD++
Sbjct: 77 -PIYIVTEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 132
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
NIL+ E L K++DFGLA+++ E + I + PE + T SD++SF
Sbjct: 133 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 192
Query: 252 GIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILK 311
GI+ +L + +V R+ L + R M P E P ES+
Sbjct: 193 GILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP----ECP-----------ESLHD 237
Query: 312 IAVLCVAKSSKGRPTIDVV 330
+ C K + RPT + +
Sbjct: 238 LMCQCWRKDPEERPTFEYL 256
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 117/262 (44%), Gaps = 19/262 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYK-SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG G G+V G VAIK I + S + D F E + + + H LV L+G C +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 91
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKL 192
+++ E+ A G L +L ++ +++ +D A+ YL +HRD+
Sbjct: 92 RPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAA 148
Query: 193 TNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFG 252
N L+ ++ K+SDFGL++ + +E + + + PE + +K + SDI++FG
Sbjct: 149 RNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 208
Query: 253 IVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKI 312
++ ++ S K+ F + A ++ G R + P L E + I
Sbjct: 209 VLMWEIYSLGKMPYERFTN----SETAEHIAQGLRLYR----PHLAS-------EKVYTI 253
Query: 313 AVLCVAKSSKGRPTIDVVYEEI 334
C + + RPT ++ I
Sbjct: 254 MYSCWHEKADERPTFKILLSNI 275
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 117/262 (44%), Gaps = 19/262 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYK-SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG G G+V G VAIK I + S + D F E + + + H LV L+G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 76
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKL 192
+++ E+ A G L +L ++ +++ +D A+ YL +HRD+
Sbjct: 77 RPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAA 133
Query: 193 TNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFG 252
N L+ ++ K+SDFGL++ + +E + + + PE + +K + SDI++FG
Sbjct: 134 RNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 193
Query: 253 IVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKI 312
++ ++ S K+ F + A ++ G R + P L E + I
Sbjct: 194 VLMWEIYSLGKMPYERFTN----SETAEHIAQGLRLYR----PHLAS-------EKVYTI 238
Query: 313 AVLCVAKSSKGRPTIDVVYEEI 334
C + + RPT ++ I
Sbjct: 239 MYSCWHEKADERPTFKILLSNI 260
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 117/262 (44%), Gaps = 19/262 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYK-SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG G G+V G VAIK I + S + D F E + + + H LV L+G C +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 71
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKL 192
+++ E+ A G L +L ++ +++ +D A+ YL +HRD+
Sbjct: 72 RPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAA 128
Query: 193 TNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFG 252
N L+ ++ K+SDFGL++ + +E + + + PE + +K + SDI++FG
Sbjct: 129 RNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 188
Query: 253 IVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKI 312
++ ++ S K+ F + A ++ G R + P L E + I
Sbjct: 189 VLMWEIYSLGKMPYERFTN----SETAEHIAQGLRLYR----PHLAS-------EKVYTI 233
Query: 313 AVLCVAKSSKGRPTIDVVYEEI 334
C + + RPT ++ I
Sbjct: 234 MYSCWHEKADERPTFKILLSNI 255
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 116/259 (44%), Gaps = 21/259 (8%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG+G G V+ G VAIK + + ++F +E + + ++RH LV L+ E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC-IVHRDIK 191
Y+V E+ + G+L L + R+ L D A + Y++ VHRD++
Sbjct: 86 -PIYIVTEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 141
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
NIL+ E L K++DFGLA+++ E + I + PE + T SD++SF
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 252 GIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILK 311
GI+ +L + +V R+ L + R M P E P ES+
Sbjct: 202 GILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP----ECP-----------ESLHD 246
Query: 312 IAVLCVAKSSKGRPTIDVV 330
+ C K + RPT + +
Sbjct: 247 LMCQCWRKDPEERPTFEYL 265
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 106/230 (46%), Gaps = 26/230 (11%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ-VVAIKHIYKSNNTDS-----FSREVEGLSRVRHPNLVCL 125
R LG+G G VY + + ++A+K ++K+ + REVE S +RHPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+G + YL+ E+ G + + L+K S +R + + A AL Y H +
Sbjct: 74 YGYFHDSTRVYLILEYAPLGTVYRE-LQKLSKFDEQRTATYITELANALSYCH---SKKV 129
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
+HRDIK N+LL E K++DFG + GT+ Y+ PE +
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC---GTLDYLPPEMIEGRMHDEK 186
Query: 246 SDIYSFGIVALQLLSGQKVIE-------------LDFDARDQLTRKARDV 282
D++S G++ + L G+ E ++F D +T ARD+
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGARDL 236
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 20/197 (10%)
Query: 74 LGRGSAGLVYKGVLPSGQV-VAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY+GV + VA+K + + + F +E + ++HPNLV L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI------ 185
Y++ EF GNL +L R A+ L Y+ I +
Sbjct: 81 EPPFYIIIEFMTYGNLLDYL----------RECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 186 --VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLT 243
+HRD+ N L+ E K++DFGL++++ + + I + PE + K +
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 244 CASDIYSFGIVALQLLS 260
SD+++FG++ ++ +
Sbjct: 191 IKSDVWAFGVLLWEIAT 207
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 20/197 (10%)
Query: 74 LGRGSAGLVYKGVLPSGQV-VAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY+GV + VA+K + + + F +E + ++HPNLV L G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI------ 185
Y++ EF GNL +L R A+ L Y+ I +
Sbjct: 86 EPPFYIITEFMTYGNLLDYL----------RECNRQEVSAVVLLYMATQISSAMEYLEKK 135
Query: 186 --VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLT 243
+HRD+ N L+ E K++DFGL++++ + + I + PE + K +
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 244 CASDIYSFGIVALQLLS 260
SD+++FG++ ++ +
Sbjct: 196 IKSDVWAFGVLLWEIAT 212
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 116/259 (44%), Gaps = 21/259 (8%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG+G G V+ G VAIK + + ++F +E + + ++RH LV L+ E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC-IVHRDIK 191
Y+V E+ + G+L L + R+ L D A + Y++ VHRD++
Sbjct: 86 -PIYIVIEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 141
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
NIL+ E L K++DFGLA+++ E + I + PE + T SD++SF
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 252 GIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILK 311
GI+ +L + +V R+ L + R M P E P ES+
Sbjct: 202 GILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP----ECP-----------ESLHD 246
Query: 312 IAVLCVAKSSKGRPTIDVV 330
+ C K + RPT + +
Sbjct: 247 LMCQCWRKDPEERPTFEYL 265
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
Query: 74 LGRGSAGLVYKGVLPSGQV-VAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY+GV + VA+K + + + F +E + ++HPNLV L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG-CIVHRDI 190
Y++ EF GNL +L + E +L A + Y++ +HRD+
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQ---EVNAVVLLYMATQISSAMEYLEKKNFIHRDL 137
Query: 191 KLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYS 250
N L+ E K++DFGL++++ + + I + PE + K + SD+++
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 197
Query: 251 FGIVALQLLS 260
FG++ ++ +
Sbjct: 198 FGVLLWEIAT 207
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 20/197 (10%)
Query: 74 LGRGSAGLVYKGVLPSGQV-VAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY+GV + VA+K + + + F +E + ++HPNLV L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI------ 185
Y++ EF GNL +L R A+ L Y+ I +
Sbjct: 81 EPPFYIITEFMTYGNLLDYL----------RECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 186 --VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLT 243
+HRD+ N L+ E K++DFGL++++ + + I + PE + K +
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 244 CASDIYSFGIVALQLLS 260
SD+++FG++ ++ +
Sbjct: 191 IKSDVWAFGVLLWEIAT 207
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 20/197 (10%)
Query: 74 LGRGSAGLVYKGVLPSGQV-VAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY+GV + VA+K + + + F +E + ++HPNLV L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI------ 185
Y++ EF GNL +L R A+ L Y+ I +
Sbjct: 81 EPPFYIITEFMTYGNLLDYL----------RECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 186 --VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLT 243
+HRD+ N L+ E K++DFGL++++ + + I + PE + K +
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 244 CASDIYSFGIVALQLLS 260
SD+++FG++ ++ +
Sbjct: 191 IKSDVWAFGVLLWEIAT 207
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
Query: 74 LGRGSAGLVYKGVLPSGQV-VAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY+GV + VA+K + + + F +E + ++HPNLV L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG-CIVHRDI 190
Y++ EF GNL +L + E +L A + Y++ +HRD+
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQ---EVNAVVLLYMATQISSAMEYLEKKNFIHRDL 137
Query: 191 KLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYS 250
N L+ E K++DFGL++++ + + I + PE + K + SD+++
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 197
Query: 251 FGIVALQLLS 260
FG++ ++ +
Sbjct: 198 FGVLLWEIAT 207
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 125/285 (43%), Gaps = 38/285 (13%)
Query: 56 FSKDEIENAINNDWDRRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTDS-----FSR 109
F KD+ E + D R +G GS G VY + + +VVAIK + S + +
Sbjct: 47 FFKDDPEKLFS---DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIK 103
Query: 110 EVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRD 169
EV L ++RHPN + GC + +LV E+C A LL E + +
Sbjct: 104 EVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGS--ASDLLEVHKKPLQEVEIAAVTH 161
Query: 170 CAL-ALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGT 228
AL L YLH + ++HRD+K NILL+E KL DFG A + M + F GT
Sbjct: 162 GALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASI--MAPANXFV---GT 213
Query: 229 IGYMDPEY---MTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMG 285
+M PE M + D++S GI ++ L+ +K + +A L A++
Sbjct: 214 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIE-LAERKPPLFNMNAMSALYHIAQN---- 268
Query: 286 KRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVV 330
E P L F + + C+ K + RPT +V+
Sbjct: 269 -------ESPALQSGHWSEYFRNFVDS---CLQKIPQDRPTSEVL 303
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 20/197 (10%)
Query: 74 LGRGSAGLVYKGVLPSGQV-VAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY+GV + VA+K + + + F +E + ++HPNLV L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI------ 185
Y++ EF GNL +L R A+ L Y+ I +
Sbjct: 81 EPPFYIIIEFMTYGNLLDYL----------RECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 186 --VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLT 243
+HRD+ N L+ E K++DFGL++++ + + I + PE + K +
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 244 CASDIYSFGIVALQLLS 260
SD+++FG++ ++ +
Sbjct: 191 IKSDVWAFGVLLWEIAT 207
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 116/259 (44%), Gaps = 21/259 (8%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG+G G V+ G VAIK + + ++F +E + + ++RH LV L+ E
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 74
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC-IVHRDIK 191
Y+V E+ + G+L L + R+ L D A + Y++ VHRD++
Sbjct: 75 -PIYIVTEYMSKGSLLDFLKGEMGKYL---RLPQLVDMAAQIASGMAYVERMNYVHRDLR 130
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
NIL+ E L K++DFGLA+++ E + I + PE + T SD++SF
Sbjct: 131 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 190
Query: 252 GIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILK 311
GI+ +L + +V R+ L + R M P E P ES+
Sbjct: 191 GILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP----ECP-----------ESLHD 235
Query: 312 IAVLCVAKSSKGRPTIDVV 330
+ C K + RPT + +
Sbjct: 236 LMCQCWRKDPEERPTFEYL 254
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
Query: 74 LGRGSAGLVYKGVLPSGQV-VAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY+GV + VA+K + + + F +E + ++HPNLV L G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG-CIVHRDI 190
Y++ EF GNL +L + E +L A + Y++ +HRD+
Sbjct: 86 EPPFYIIIEFMTYGNLLDYLRECNRQ---EVNAVVLLYMATQISSAMEYLEKKNFIHRDL 142
Query: 191 KLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYS 250
N L+ E K++DFGL++++ + + I + PE + K + SD+++
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 202
Query: 251 FGIVALQLLS 260
FG++ ++ +
Sbjct: 203 FGVLLWEIAT 212
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
Query: 74 LGRGSAGLVYKGVLPSGQV-VAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY+GV + VA+K + + + F +E + ++HPNLV L G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG-CIVHRDI 190
Y++ EF GNL +L + E +L A + Y++ +HRD+
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQ---EVNAVVLLYMATQISSAMEYLEKKNFIHRDL 139
Query: 191 KLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYS 250
N L+ E K++DFGL++++ + + I + PE + K + SD+++
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 199
Query: 251 FGIVALQLLS 260
FG++ ++ +
Sbjct: 200 FGVLLWEIAT 209
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 20/197 (10%)
Query: 74 LGRGSAGLVYKGVLPSGQV-VAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY+GV + VA+K + + + F +E + ++HPNLV L G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI------ 185
Y++ EF GNL +L R A+ L Y+ I +
Sbjct: 79 EPPFYIITEFMTYGNLLDYL----------RECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 186 --VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLT 243
+HRD+ N L+ E K++DFGL++++ + + I + PE + K +
Sbjct: 129 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFS 188
Query: 244 CASDIYSFGIVALQLLS 260
SD+++FG++ ++ +
Sbjct: 189 IKSDVWAFGVLLWEIAT 205
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
Query: 74 LGRGSAGLVYKGVLPSGQV-VAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY+GV + VA+K + + + F +E + ++HPNLV L G C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 93
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG-CIVHRDI 190
Y++ EF GNL +L + E +L A + Y++ +HRD+
Sbjct: 94 EPPFYIITEFMTYGNLLDYLRECNRQ---EVNAVVLLYMATQISSAMEYLEKKNFIHRDL 150
Query: 191 KLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYS 250
N L+ E K++DFGL++++ + + I + PE + K + SD+++
Sbjct: 151 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 210
Query: 251 FGIVALQLLS 260
FG++ ++ +
Sbjct: 211 FGVLLWEIAT 220
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
Query: 74 LGRGSAGLVYKGVLPSGQV-VAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY+GV + VA+K + + + F +E + ++HPNLV L G C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 84
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG-CIVHRDI 190
Y++ EF GNL +L + E +L A + Y++ +HRD+
Sbjct: 85 EPPFYIITEFMTYGNLLDYLRECNRQ---EVNAVVLLYMATQISSAMEYLEKKNFIHRDL 141
Query: 191 KLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYS 250
N L+ E K++DFGL++++ + + I + PE + K + SD+++
Sbjct: 142 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 201
Query: 251 FGIVALQLLS 260
FG++ ++ +
Sbjct: 202 FGVLLWEIAT 211
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 26/230 (11%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ-VVAIKHIYKSNNTDS-----FSREVEGLSRVRHPNLVCL 125
R LG+G G VY + ++A+K ++K+ + REVE S +RHPN++ L
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+G + YL+ E+ G + + L+K S +R + + A AL Y H +
Sbjct: 75 YGYFHDATRVYLILEYAPLGTVYRE-LQKLSKFDEQRTATYITELANALSYCH---SKRV 130
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
+HRDIK N+LL E K++DFG + GT+ Y+ PE +
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLC---GTLDYLPPEMIEGRMHDEK 187
Query: 246 SDIYSFGIVALQLLSGQKVIE-------------LDFDARDQLTRKARDV 282
D++S G++ + L G+ E ++F D +T ARD+
Sbjct: 188 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDL 237
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
Query: 74 LGRGSAGLVYKGVLPSGQV-VAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY+GV + VA+K + + + F +E + ++HPNLV L G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG-CIVHRDI 190
Y++ EF GNL +L + E +L A + Y++ +HRD+
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQ---EVNAVVLLYMATQISSAMEYLEKKNFIHRDL 142
Query: 191 KLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYS 250
N L+ E K++DFGL++++ + + I + PE + K + SD+++
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 202
Query: 251 FGIVALQLLS 260
FG++ ++ +
Sbjct: 203 FGVLLWEIAT 212
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 97/197 (49%), Gaps = 13/197 (6%)
Query: 74 LGRGSAGLVYKGVLPS-GQVVAIKHIYKSNNTDS----FSREVEGLSRVRHPNLVCLFGC 128
+G GS G K S G+++ K + + T++ EV L ++HPN+V +
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 129 CVEGGEQ--YLVYEFCAAGNLAQHLLR---KDSVLTWERRVKILRDCALALRYLHHYIDG 183
++ Y+V E+C G+LA + + + L E ++++ LAL+ H DG
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 184 --CIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAK 241
++HRD+K N+ L K KL DFGLA++L + S T V GT YM PE M
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMSPEQMNRMS 192
Query: 242 LTCASDIYSFGIVALQL 258
SDI+S G + +L
Sbjct: 193 YNEKSDIWSLGCLLYEL 209
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
Query: 74 LGRGSAGLVYKGVLPSGQV-VAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY+GV + VA+K + + + F +E + ++HPNLV L G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG-CIVHRDI 190
Y++ EF GNL +L + E +L A + Y++ +HRD+
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQ---EVNAVVLLYMATQISSAMEYLEKKNFIHRDL 142
Query: 191 KLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYS 250
N L+ E K++DFGL++++ + + I + PE + K + SD+++
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 202
Query: 251 FGIVALQLLS 260
FG++ ++ +
Sbjct: 203 FGVLLWEIAT 212
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 26/230 (11%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ-VVAIKHIYKSNNTDS-----FSREVEGLSRVRHPNLVCL 125
R LG+G G VY + ++A+K ++K+ + REVE S +RHPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+G + YL+ E+ G + + L+K S +R + + A AL Y H +
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRE-LQKLSKFDEQRTATYITELANALSYCH---SKRV 129
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
+HRDIK N+LL E K++DFG + GT+ Y+ PE +
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC---GTLDYLPPEMIEGRMHDEK 186
Query: 246 SDIYSFGIVALQLLSGQKVIE-------------LDFDARDQLTRKARDV 282
D++S G++ + L G+ E ++F D +T ARD+
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDL 236
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 125/285 (43%), Gaps = 38/285 (13%)
Query: 56 FSKDEIENAINNDWDRRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTDS-----FSR 109
F KD+ E + D R +G GS G VY + + +VVAIK + S + +
Sbjct: 8 FFKDDPEKLFS---DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIK 64
Query: 110 EVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRD 169
EV L ++RHPN + GC + +LV E+C A LL E + +
Sbjct: 65 EVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGS--ASDLLEVHKKPLQEVEIAAVTH 122
Query: 170 CAL-ALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGT 228
AL L YLH + ++HRD+K NILL+E KL DFG A + M + F GT
Sbjct: 123 GALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASI--MAPANXFV---GT 174
Query: 229 IGYMDPEY---MTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMG 285
+M PE M + D++S GI ++ L+ +K + +A L A++
Sbjct: 175 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIE-LAERKPPLFNMNAMSALYHIAQN---- 229
Query: 286 KRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVV 330
E P L F + + C+ K + RPT +V+
Sbjct: 230 -------ESPALQSGHWSEYFRNFVDS---CLQKIPQDRPTSEVL 264
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 117/262 (44%), Gaps = 19/262 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYK-SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG G G+V G VAIK I + S + D F E + + + H LV L+G C +
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 82
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKL 192
+++ E+ A G L +L ++ +++ +D A+ YL +HRD+
Sbjct: 83 RPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAA 139
Query: 193 TNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFG 252
N L+ ++ K+SDFGL++ + +E + + + PE + +K + SDI++FG
Sbjct: 140 RNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 199
Query: 253 IVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKI 312
++ ++ S K+ F + A ++ G R + P L E + I
Sbjct: 200 VLMWEIYSLGKMPYERFTN----SETAEHIAQGLRLYR----PHLAS-------EKVYTI 244
Query: 313 AVLCVAKSSKGRPTIDVVYEEI 334
C + + RPT ++ I
Sbjct: 245 MYSCWHEKADERPTFKILLSNI 266
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ-VVAIKHIYKSNNTDS-----FSREVEGLSRVRHPNLVCL 125
R LG+G G VY + ++A+K ++K+ + REVE S +RHPN++ L
Sbjct: 16 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+G + YL+ E+ G + + L+K S +R + + A AL Y H +
Sbjct: 76 YGYFHDATRVYLILEYAPLGTVYRE-LQKLSKFDEQRTATYITELANALSYCH---SKRV 131
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
+HRDIK N+LL E K+++FG + S T + GT+ Y+ PE +
Sbjct: 132 IHRDIKPENLLLGSAGELKIANFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 188
Query: 246 SDIYSFGIVALQLLSGQKVIE-------------LDFDARDQLTRKARDV 282
D++S G++ + L G+ E ++F D +T ARD+
Sbjct: 189 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDL 238
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
Query: 74 LGRGSAGLVYKGVLPSGQV-VAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY+GV + VA+K + + + F +E + ++HPNLV L G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG-CIVHRDI 190
Y++ EF GNL +L + E +L A + Y++ +HRD+
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQ---EVNAVVLLYMATQISSAMEYLEKKNFIHRDL 139
Query: 191 KLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYS 250
N L+ E K++DFGL++++ + + I + PE + K + SD+++
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 199
Query: 251 FGIVALQLLS 260
FG++ ++ +
Sbjct: 200 FGVLLWEIAT 209
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 26/230 (11%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ-VVAIKHIYKSNNTDS-----FSREVEGLSRVRHPNLVCL 125
R LG+G G VY + ++A+K ++K+ + REVE S +RHPN++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+G + YL+ E+ G + + L+K S +R + + A AL Y H +
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRE-LQKLSKFDEQRTATYITELANALSYCH---SKRV 132
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
+HRDIK N+LL E K++DFG + GT+ Y+ PE +
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC---GTLDYLPPEMIEGRMHDEK 189
Query: 246 SDIYSFGIVALQLLSGQKVIE-------------LDFDARDQLTRKARDV 282
D++S G++ + L G+ E ++F D +T ARD+
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDL 239
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 100/198 (50%), Gaps = 14/198 (7%)
Query: 74 LGRGSAGLV----YKGVLP-SGQVVAIKHIYKSNNTD--SFSREVEGLSRVRHPNLVCLF 126
LG+G+ G V Y + +G+VVA+K + S F RE+E L ++H N+V
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 127 GCCVEGGEQYL--VYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
G C G + L + E+ G+L +L + + +K+L+ + + + +
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID---HIKLLQYTSQICKGMEYLGTKR 135
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES--KVFTDVRGTIGYMDPEYMTNAKL 242
+HR++ NIL+ + K+ DFGL K+L ++ KV I + PE +T +K
Sbjct: 136 YIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKF 195
Query: 243 TCASDIYSFGIVALQLLS 260
+ ASD++SFG+V +L +
Sbjct: 196 SVASDVWSFGVVLYELFT 213
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 26/230 (11%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ-VVAIKHIYKSNNTDS-----FSREVEGLSRVRHPNLVCL 125
R LG+G G VY + ++A+K ++K+ + REVE S +RHPN++ L
Sbjct: 16 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+G + YL+ E+ G + + L+K S +R + + A AL Y H +
Sbjct: 76 YGYFHDATRVYLILEYAPLGTVYRE-LQKLSKFDEQRTATYITELANALSYCH---SKRV 131
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
+HRDIK N+LL E K++DFG + GT+ Y+ PE +
Sbjct: 132 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC---GTLDYLPPEMIEGRMHDEK 188
Query: 246 SDIYSFGIVALQLLSGQKVIE-------------LDFDARDQLTRKARDV 282
D++S G++ + L G+ E ++F D +T ARD+
Sbjct: 189 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDL 238
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 26/230 (11%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ-VVAIKHIYKSNNTDS-----FSREVEGLSRVRHPNLVCL 125
R LG+G G VY + ++A+K ++K+ + REVE S +RHPN++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+G + YL+ E+ G + + L+K S +R + + A AL Y H +
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRE-LQKLSKFDEQRTATYITELANALSYCH---SKRV 132
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
+HRDIK N+LL E K++DFG + GT+ Y+ PE +
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC---GTLDYLPPEMIEGRMHDEK 189
Query: 246 SDIYSFGIVALQLLSGQKVIE-------------LDFDARDQLTRKARDV 282
D++S G++ + L G+ E ++F D +T ARD+
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDL 239
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 116/259 (44%), Gaps = 21/259 (8%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG+G G V+ G VAIK + + ++F +E + + ++RH LV L+ E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC-IVHRDIK 191
Y+V E+ + G+L L + R+ L D A + Y++ VHRD++
Sbjct: 86 -PIYIVCEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 141
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
NIL+ E L K++DFGLA+++ E + I + PE + T SD++SF
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 252 GIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILK 311
GI+ +L + +V R+ L + R M P E P ES+
Sbjct: 202 GILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP----ECP-----------ESLHD 246
Query: 312 IAVLCVAKSSKGRPTIDVV 330
+ C K + RPT + +
Sbjct: 247 LMCQCWRKDPEERPTFEYL 265
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 116/267 (43%), Gaps = 37/267 (13%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYK-SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG G G V+ G VA+K + + S + D+F E + +++H LV L+ +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSV-LTWERRVKILRDCALALRYLHHYIDGCIVHRDIK 191
Y++ E+ G+L L + LT + + + A + ++ + +HRD++
Sbjct: 81 -PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 136
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
NIL+++ L K++DFGLA+++ E + I + PE + T SD++SF
Sbjct: 137 AANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 196
Query: 252 GIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRAD------ 305
GI+ ++ V+ G+ P +P + N+ R
Sbjct: 197 GILLTEI-----------------------VTHGRIPYPGMTNPEVIQNLERGYRMVRPD 233
Query: 306 --FESILKIAVLCVAKSSKGRPTIDVV 330
E + ++ LC + + RPT D +
Sbjct: 234 NCPEELYQLMRLCWKERPEDRPTFDYL 260
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 26/230 (11%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ-VVAIKHIYKSNNTDS-----FSREVEGLSRVRHPNLVCL 125
R LG+G G VY + ++A+K ++K+ + REVE S +RHPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+G + YL+ E+ G + + L+K S +R + + A AL Y H +
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRE-LQKLSKFDEQRTATYITELANALSYCH---SKRV 129
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
+HRDIK N+LL E K++DFG + GT+ Y+ PE +
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC---GTLDYLPPEMIEGRMHDEK 186
Query: 246 SDIYSFGIVALQLLSGQKVIE-------------LDFDARDQLTRKARDV 282
D++S G++ + L G+ E ++F D +T ARD+
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDL 236
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 117/262 (44%), Gaps = 19/262 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYK-SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG G G+V G VAIK I + S + D F E + + + H LV L+G C +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 91
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKL 192
+++ E+ A G L +L ++ +++ +D A+ YL +HRD+
Sbjct: 92 RPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAA 148
Query: 193 TNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFG 252
N L+ ++ K+SDFGL++ + +E + + + PE + +K + SDI++FG
Sbjct: 149 RNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFG 208
Query: 253 IVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKI 312
++ ++ S K+ F + A ++ G R + P L E + I
Sbjct: 209 VLMWEIYSLGKMPYERFTN----SETAEHIAQGLRLYR----PHLAS-------EKVYTI 253
Query: 313 AVLCVAKSSKGRPTIDVVYEEI 334
C + + RPT ++ I
Sbjct: 254 MYSCWHEKADERPTFKILLSNI 275
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 116/267 (43%), Gaps = 37/267 (13%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYK-SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG G G V+ G VA+K + + S + D+F E + +++H LV L+ +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 82
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSV-LTWERRVKILRDCALALRYLHHYIDGCIVHRDIK 191
Y++ E+ G+L L + LT + + + A + ++ + +HRD++
Sbjct: 83 -PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 138
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
NIL+++ L K++DFGLA+++ E + I + PE + T SD++SF
Sbjct: 139 AANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 198
Query: 252 GIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRAD------ 305
GI+ ++ V+ G+ P +P + N+ R
Sbjct: 199 GILLTEI-----------------------VTHGRIPYPGMTNPEVIQNLERGYRMVRPD 235
Query: 306 --FESILKIAVLCVAKSSKGRPTIDVV 330
E + ++ LC + + RPT D +
Sbjct: 236 NCPEELYQLMRLCWKERPEDRPTFDYL 262
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 116/267 (43%), Gaps = 37/267 (13%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYK-SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG G G V+ G VA+K + + S + D+F E + +++H LV L+ +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 89
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSV-LTWERRVKILRDCALALRYLHHYIDGCIVHRDIK 191
Y++ E+ G+L L + LT + + + A + ++ + +HRD++
Sbjct: 90 -PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 145
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
NIL+++ L K++DFGLA+++ E + I + PE + T SD++SF
Sbjct: 146 AANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 205
Query: 252 GIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRAD------ 305
GI+ ++ V+ G+ P +P + N+ R
Sbjct: 206 GILLTEI-----------------------VTHGRIPYPGMTNPEVIQNLERGYRMVRPD 242
Query: 306 --FESILKIAVLCVAKSSKGRPTIDVV 330
E + ++ LC + + RPT D +
Sbjct: 243 NCPEELYQLMRLCWKERPEDRPTFDYL 269
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 116/267 (43%), Gaps = 37/267 (13%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYK-SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG G G V+ G VA+K + + S + D+F E + +++H LV L+ +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 86
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSV-LTWERRVKILRDCALALRYLHHYIDGCIVHRDIK 191
Y++ E+ G+L L + LT + + + A + ++ + +HRD++
Sbjct: 87 -PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 142
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
NIL+++ L K++DFGLA+++ E + I + PE + T SD++SF
Sbjct: 143 AANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 202
Query: 252 GIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRAD------ 305
GI+ ++ V+ G+ P +P + N+ R
Sbjct: 203 GILLTEI-----------------------VTHGRIPYPGMTNPEVIQNLERGYRMVRPD 239
Query: 306 --FESILKIAVLCVAKSSKGRPTIDVV 330
E + ++ LC + + RPT D +
Sbjct: 240 NCPEELYQLMRLCWKERPEDRPTFDYL 266
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 116/267 (43%), Gaps = 37/267 (13%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYK-SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG G G V+ G VA+K + + S + D+F E + +++H LV L+ +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 81
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSV-LTWERRVKILRDCALALRYLHHYIDGCIVHRDIK 191
Y++ E+ G+L L + LT + + + A + ++ + +HRD++
Sbjct: 82 -PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 137
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
NIL+++ L K++DFGLA+++ E + I + PE + T SD++SF
Sbjct: 138 AANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 197
Query: 252 GIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRAD------ 305
GI+ ++ V+ G+ P +P + N+ R
Sbjct: 198 GILLTEI-----------------------VTHGRIPYPGMTNPEVIQNLERGYRMVRPD 234
Query: 306 --FESILKIAVLCVAKSSKGRPTIDVV 330
E + ++ LC + + RPT D +
Sbjct: 235 NCPEELYQLMRLCWKERPEDRPTFDYL 261
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 116/267 (43%), Gaps = 37/267 (13%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYK-SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG G G V+ G VA+K + + S + D+F E + +++H LV L+ +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSV-LTWERRVKILRDCALALRYLHHYIDGCIVHRDIK 191
Y++ E+ G+L L + LT + + + A + ++ + +HRD++
Sbjct: 81 -PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 136
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
NIL+++ L K++DFGLA+++ E + I + PE + T SD++SF
Sbjct: 137 AANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 196
Query: 252 GIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRAD------ 305
GI+ ++ V+ G+ P +P + N+ R
Sbjct: 197 GILLTEI-----------------------VTHGRIPYPGMTNPEVIQNLERGYRMVRPD 233
Query: 306 --FESILKIAVLCVAKSSKGRPTIDVV 330
E + ++ LC + + RPT D +
Sbjct: 234 NCPEELYQLMRLCWKERPEDRPTFDYL 260
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 116/267 (43%), Gaps = 37/267 (13%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYK-SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG G G V+ G VA+K + + S + D+F E + +++H LV L+ +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 88
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSV-LTWERRVKILRDCALALRYLHHYIDGCIVHRDIK 191
Y++ E+ G+L L + LT + + + A + ++ + +HRD++
Sbjct: 89 -PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 144
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
NIL+++ L K++DFGLA+++ E + I + PE + T SD++SF
Sbjct: 145 AANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 204
Query: 252 GIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRAD------ 305
GI+ ++ V+ G+ P +P + N+ R
Sbjct: 205 GILLTEI-----------------------VTHGRIPYPGMTNPEVIQNLERGYRMVRPD 241
Query: 306 --FESILKIAVLCVAKSSKGRPTIDVV 330
E + ++ LC + + RPT D +
Sbjct: 242 NCPEELYQLMRLCWKERPEDRPTFDYL 268
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 116/259 (44%), Gaps = 21/259 (8%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG+G G V+ G VAIK + + ++F +E + + ++RH LV L+ E
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 334
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC-IVHRDIK 191
Y+V E+ + G+L L + R+ L D A + Y++ VHRD++
Sbjct: 335 -PIYIVTEYMSKGSLLDFLKGETGKYL---RLPQLVDMAAQIASGMAYVERMNYVHRDLR 390
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
NIL+ E L K++DFGLA+++ E + I + PE + T SD++SF
Sbjct: 391 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 450
Query: 252 GIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILK 311
GI+ +L + +V R+ L + R M P E P ES+
Sbjct: 451 GILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP----ECP-----------ESLHD 495
Query: 312 IAVLCVAKSSKGRPTIDVV 330
+ C K + RPT + +
Sbjct: 496 LMCQCWRKEPEERPTFEYL 514
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 99/199 (49%), Gaps = 17/199 (8%)
Query: 74 LGRGSAGLVYKGVLPS-GQVVAIKHIYKSNNTDSFSR----EVEGLSRVRHPNLVCLFGC 128
+G GS G K S G+++ K + + T++ + EV L ++HPN+V +
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 129 CVEGGEQ--YLVYEFCAAGNLAQHLLR---KDSVLTWERRVKILRDCALALRYLHHYIDG 183
++ Y+V E+C G+LA + + + L E ++++ LAL+ H DG
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 184 --CIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE--SKVFTDVRGTIGYMDPEYMTN 239
++HRD+K N+ L K KL DFGLA++L +E +K F GT YM PE M
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFV---GTPYYMSPEQMNR 190
Query: 240 AKLTCASDIYSFGIVALQL 258
SDI+S G + +L
Sbjct: 191 MSYNEKSDIWSLGCLLYEL 209
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
Query: 74 LGRGSAGLVYKGVLPSGQV-VAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY+GV + VA+K + + + F +E + ++HPNLV L G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG-CIVHRDI 190
Y++ EF GNL +L + E +L A + Y++ +HRD+
Sbjct: 82 EPPFYIITEFMTYGNLLDYLRECNRQ---EVNAVVLLYMATQISSAMEYLEKKNFIHRDL 138
Query: 191 KLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYS 250
N L+ E K++DFGL++++ + + I + PE + K + SD+++
Sbjct: 139 AARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWA 198
Query: 251 FGIVALQLLS 260
FG++ ++ +
Sbjct: 199 FGVLLWEIAT 208
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 116/267 (43%), Gaps = 37/267 (13%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYK-SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG G G V+ G VA+K + + S + D+F E + +++H LV L+ +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 85
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSV-LTWERRVKILRDCALALRYLHHYIDGCIVHRDIK 191
Y++ E+ G+L L + LT + + + A + ++ + +HRD++
Sbjct: 86 -PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 141
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
NIL+++ L K++DFGLA+++ E + I + PE + T SD++SF
Sbjct: 142 AANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 201
Query: 252 GIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRAD------ 305
GI+ ++ V+ G+ P +P + N+ R
Sbjct: 202 GILLTEI-----------------------VTHGRIPYPGMTNPEVIQNLERGYRMVRPD 238
Query: 306 --FESILKIAVLCVAKSSKGRPTIDVV 330
E + ++ LC + + RPT D +
Sbjct: 239 NCPEELYQLMRLCWKERPEDRPTFDYL 265
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
Query: 74 LGRGSAGLVYKGVLPSGQV-VAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY+GV + VA+K + + + F +E + ++HPNLV L G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG-CIVHRDI 190
Y++ EF GNL +L + E +L A + Y++ +HRD+
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQ---EVNAVVLLYMATQISSAMEYLEKKNFIHRDL 139
Query: 191 KLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYS 250
N L+ E K++DFGL++++ + + I + PE + K + SD+++
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWA 199
Query: 251 FGIVALQLLS 260
FG++ ++ +
Sbjct: 200 FGVLLWEIAT 209
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 116/267 (43%), Gaps = 37/267 (13%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYK-SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG G G V+ G VA+K + + S + D+F E + +++H LV L+ +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 86
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSV-LTWERRVKILRDCALALRYLHHYIDGCIVHRDIK 191
Y++ E+ G+L L + LT + + + A + ++ + +HRD++
Sbjct: 87 -PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 142
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
NIL+++ L K++DFGLA+++ E + I + PE + T SD++SF
Sbjct: 143 AANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 202
Query: 252 GIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRAD------ 305
GI+ ++ V+ G+ P +P + N+ R
Sbjct: 203 GILLTEI-----------------------VTHGRIPYPGMTNPEVIQNLERGYRMVRPD 239
Query: 306 --FESILKIAVLCVAKSSKGRPTIDVV 330
E + ++ LC + + RPT D +
Sbjct: 240 NCPEELYQLMRLCWKERPEDRPTFDYL 266
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 115/259 (44%), Gaps = 21/259 (8%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG+G G V+ G VAIK + + ++F +E + + ++RH LV L+ E
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 82
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC-IVHRDIK 191
Y+V E+ G+L L + R+ L D + + Y++ VHRD++
Sbjct: 83 -PIYIVTEYMNKGSLLDFLKGETGKYL---RLPQLVDMSAQIASGMAYVERMNYVHRDLR 138
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
NIL+ E L K++DFGLA+++ E + I + PE + T SD++SF
Sbjct: 139 AANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 198
Query: 252 GIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILK 311
GI+ +L + +V R+ L + R M P E P ES+
Sbjct: 199 GILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP----ECP-----------ESLHD 243
Query: 312 IAVLCVAKSSKGRPTIDVV 330
+ C K + RPT + +
Sbjct: 244 LMCQCWRKEPEERPTFEYL 262
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 116/267 (43%), Gaps = 37/267 (13%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYK-SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG G G V+ G VA+K + + S + D+F E + +++H LV L+ +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 80
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSV-LTWERRVKILRDCALALRYLHHYIDGCIVHRDIK 191
Y++ E+ G+L L + LT + + + A + ++ + +HRD++
Sbjct: 81 -PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 136
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
NIL+++ L K++DFGLA+++ E + I + PE + T SD++SF
Sbjct: 137 AANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 196
Query: 252 GIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRAD------ 305
GI+ ++ V+ G+ P +P + N+ R
Sbjct: 197 GILLTEI-----------------------VTHGRIPYPGMTNPEVIQNLERGYRMVRPD 233
Query: 306 --FESILKIAVLCVAKSSKGRPTIDVV 330
E + ++ LC + + RPT D +
Sbjct: 234 NCPEELYQLMRLCWKERPEDRPTFDYL 260
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 115/259 (44%), Gaps = 21/259 (8%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG+G G V+ G VAIK + + ++F +E + + ++RH LV L+ E
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 82
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC-IVHRDIK 191
Y+V E+ G+L L + R+ L D + + Y++ VHRD++
Sbjct: 83 -PIYIVTEYMNKGSLLDFLKGETGKYL---RLPQLVDMSAQIASGMAYVERMNYVHRDLR 138
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
NIL+ E L K++DFGLA+++ E + I + PE + T SD++SF
Sbjct: 139 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 198
Query: 252 GIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILK 311
GI+ +L + +V R+ L + R M P E P ES+
Sbjct: 199 GILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP----ECP-----------ESLHD 243
Query: 312 IAVLCVAKSSKGRPTIDVV 330
+ C K + RPT + +
Sbjct: 244 LMCQCWRKEPEERPTFEYL 262
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 115/259 (44%), Gaps = 21/259 (8%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG+G G V+ G VAIK + + ++F +E + + ++RH LV L+ E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC-IVHRDIK 191
Y+V E+ + G+L L + R+ L D A + Y++ VHRD+
Sbjct: 86 -PIYIVTEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLA 141
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
NIL+ E L K++DFGLA+++ E + I + PE + T SD++SF
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 252 GIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILK 311
GI+ +L + +V R+ L + R M P E P ES+
Sbjct: 202 GILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP----ECP-----------ESLHD 246
Query: 312 IAVLCVAKSSKGRPTIDVV 330
+ C K + RPT + +
Sbjct: 247 LMCQCWRKDPEERPTFEYL 265
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 116/267 (43%), Gaps = 37/267 (13%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYK-SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG G G V+ G VA+K + + S + D+F E + +++H LV L+ +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 90
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSV-LTWERRVKILRDCALALRYLHHYIDGCIVHRDIK 191
Y++ E+ G+L L + LT + + + A + ++ + +HRD++
Sbjct: 91 -PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 146
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
NIL+++ L K++DFGLA+++ E + I + PE + T SD++SF
Sbjct: 147 AANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 206
Query: 252 GIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRAD------ 305
GI+ ++ V+ G+ P +P + N+ R
Sbjct: 207 GILLTEI-----------------------VTHGRIPYPGMTNPEVIQNLERGYRMVRPD 243
Query: 306 --FESILKIAVLCVAKSSKGRPTIDVV 330
E + ++ LC + + RPT D +
Sbjct: 244 NCPEELYQLMRLCWKERPEDRPTFDYL 270
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 115/259 (44%), Gaps = 21/259 (8%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG+G G V+ G VAIK + + ++F +E + + ++RH LV L+ E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC-IVHRDIK 191
Y+V E+ + G L L + R+ L D A + Y++ VHRD++
Sbjct: 86 -PIYIVMEYMSKGCLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 141
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
NIL+ E L K++DFGLA+++ E + I + PE + T SD++SF
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 252 GIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILK 311
GI+ +L + +V R+ L + R M P E P ES+
Sbjct: 202 GILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP----ECP-----------ESLHD 246
Query: 312 IAVLCVAKSSKGRPTIDVV 330
+ C K + RPT + +
Sbjct: 247 LMCQCWRKDPEERPTFEYL 265
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 106/230 (46%), Gaps = 26/230 (11%)
Query: 72 RFLGRGSAGLVYKG-VLPSGQVVAIKHIYKSNNTDS-----FSREVEGLSRVRHPNLVCL 125
R LG+G G VY S ++A+K ++K+ + REVE S +RHPN++ L
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+G + YL+ E+ G + + L+K S +R + + A AL Y H +
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRE-LQKLSRFDEQRTATYITELANALSYCH---SKRV 133
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
+HRDIK N+LL E K++DFG + GT+ Y+ PE +
Sbjct: 134 IHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLC---GTLDYLPPEMIEGRMHDEK 190
Query: 246 SDIYSFGIVALQLLSG-------------QKVIELDFDARDQLTRKARDV 282
D++S G++ + L G +++ ++F D +T ARD+
Sbjct: 191 VDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDL 240
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 119/279 (42%), Gaps = 26/279 (9%)
Query: 63 NAINNDWDRRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTDSFSR-----EVEGLSR 116
N + N + +GRG VY+ L G VA+K + + D+ +R E++ L +
Sbjct: 29 NTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQ 88
Query: 117 VRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHL--LRKDSVLTWERRV-KILRDCALA 173
+ HPN++ + +E E +V E AG+L++ + +K L ER V K A
Sbjct: 89 LNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA 148
Query: 174 LRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMD 233
L ++H ++HRDIK N+ +T KL D GL + + + + V GT YM
Sbjct: 149 LEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYMS 204
Query: 234 PEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFE 293
PE + SDI+S G + ++ + Q D L +K P +
Sbjct: 205 PERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYS 264
Query: 294 DPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332
E + ++ +C+ + RP + VY+
Sbjct: 265 -------------EELRQLVNMCINPDPEKRPDVTYVYD 290
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 97/199 (48%), Gaps = 17/199 (8%)
Query: 74 LGRGSAGLVYKGVLPS-GQVVAIKHIYKSNNTDS----FSREVEGLSRVRHPNLVCLFGC 128
+G GS G K S G+++ K + + T++ EV L ++HPN+V +
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 129 CVEGGEQ--YLVYEFCAAGNLAQHLLR---KDSVLTWERRVKILRDCALALRYLHHYIDG 183
++ Y+V E+C G+LA + + + L E ++++ LAL+ H DG
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 184 --CIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES--KVFTDVRGTIGYMDPEYMTN 239
++HRD+K N+ L K KL DFGLA++L + S K F GT YM PE M
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFV---GTPYYMSPEQMNR 190
Query: 240 AKLTCASDIYSFGIVALQL 258
SDI+S G + +L
Sbjct: 191 MSYNEKSDIWSLGCLLYEL 209
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 13/199 (6%)
Query: 74 LGRGSAGLVYKGV--LPSGQV-VAIKHIYKSN---NTDSFSREVEGLSRVRHPNLVCLFG 127
LG G+ G V +GV + Q+ VAIK + + +T+ RE + + ++ +P +V L G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 128 CCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVH 187
C + LV E G L + L+ K + ++L ++ ++YL + VH
Sbjct: 78 VC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVH 133
Query: 188 RDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRG--TIGYMDPEYMTNAKLTCA 245
RD+ N+LL + K+SDFGL+K LG ++S G + + PE + K +
Sbjct: 134 RDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSR 193
Query: 246 SDIYSFGIVALQLLS-GQK 263
SD++S+G+ + LS GQK
Sbjct: 194 SDVWSYGVTMWEALSYGQK 212
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 115/265 (43%), Gaps = 37/265 (13%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYK-SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG G G V+ G VA+K + + S + D+F E + +++H LV L+ +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 75
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSV-LTWERRVKILRDCALALRYLHHYIDGCIVHRDIK 191
Y++ E+ G+L L + LT + + + A + ++ + +HRD++
Sbjct: 76 -PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLR 131
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
NIL+++ L K++DFGLA+++ E + I + PE + T SD++SF
Sbjct: 132 AANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 191
Query: 252 GIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRAD------ 305
GI+ ++ V+ G+ P +P + N+ R
Sbjct: 192 GILLTEI-----------------------VTHGRIPYPGMTNPEVIQNLERGYRMVRPD 228
Query: 306 --FESILKIAVLCVAKSSKGRPTID 328
E + ++ LC + + RPT D
Sbjct: 229 NCPEELYQLMRLCWKERPEDRPTFD 253
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 115/259 (44%), Gaps = 21/259 (8%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG+G G V+ G VAIK + + ++F +E + + ++RH LV L+ E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 85
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC-IVHRDIK 191
Y+V E+ + G L L + R+ L D A + Y++ VHRD++
Sbjct: 86 -PIYIVTEYMSKGCLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 141
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
NIL+ E L K++DFGLA+++ E + I + PE + T SD++SF
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 252 GIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILK 311
GI+ +L + +V R+ L + R M P E P ES+
Sbjct: 202 GILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP----ECP-----------ESLHD 246
Query: 312 IAVLCVAKSSKGRPTIDVV 330
+ C K + RPT + +
Sbjct: 247 LMCQCWRKDPEERPTFEYL 265
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 114/257 (44%), Gaps = 21/257 (8%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG+G G V+ G VAIK + + ++F +E + + ++RH LV L+ E
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 75
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC-IVHRDIK 191
+V E+ + G+L L + R+ L D A + Y++ VHRD++
Sbjct: 76 -PIXIVTEYMSKGSLLDFLKGETGKYL---RLPQLVDMAAQIASGMAYVERMNYVHRDLR 131
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
NIL+ E L K++DFGLA+++ E + I + PE + T SD++SF
Sbjct: 132 AANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 191
Query: 252 GIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILK 311
GI+ +L + +V R+ L + R M P E P ES+
Sbjct: 192 GILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP----ECP-----------ESLHD 236
Query: 312 IAVLCVAKSSKGRPTID 328
+ C K + RPT +
Sbjct: 237 LMCQCWRKEPEERPTFE 253
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 13/202 (6%)
Query: 72 RFLGRGSAGLVY-------KGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVC 124
RFLG+G Y K V +G+VV + K + + S E+ + +P++V
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVF-AGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVG 106
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
G + Y+V E C +L + R+ +V E R +R ++YLH +
Sbjct: 107 FHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQYLH---NNR 162
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTC 244
++HRD+KL N+ L + ++ K+ DFGLA + + + D+ GT Y+ PE + +
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK-KDLCGTPNYIAPEVLCKKGHSF 221
Query: 245 ASDIYSFGIVALQLLSGQKVIE 266
DI+S G + LL G+ E
Sbjct: 222 EVDIWSLGCILYTLLVGKPPFE 243
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 13/202 (6%)
Query: 72 RFLGRGSAGLVY-------KGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVC 124
RFLG+G Y K V +G+VV + K + + S E+ + +P++V
Sbjct: 32 RFLGKGGFAKCYEITDMDTKEVF-AGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVG 90
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
G + Y+V E C +L + R+ +V E R +R ++YLH +
Sbjct: 91 FHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQYLH---NNR 146
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTC 244
++HRD+KL N+ L + ++ K+ DFGLA + + + D+ GT Y+ PE + +
Sbjct: 147 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK-KDLCGTPNYIAPEVLCKKGHSF 205
Query: 245 ASDIYSFGIVALQLLSGQKVIE 266
DI+S G + LL G+ E
Sbjct: 206 EVDIWSLGCILYTLLVGKPPFE 227
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 92/178 (51%), Gaps = 12/178 (6%)
Query: 89 SGQVVAIKHIYKSN--NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGN 146
+G++ A+K I KS S E+ L +++H N+V L YLV + + G
Sbjct: 33 TGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGE 92
Query: 147 LAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNIL-LTEKLEPKL 205
L +L + V T + +++ A++YLH + IVHRD+K N+L LT + K+
Sbjct: 93 LFDRILER-GVYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKI 148
Query: 206 --SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFGL+KM E++ + + GT GY+ PE + + A D +S G++ LL G
Sbjct: 149 MITDFGLSKM---EQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 26/200 (13%)
Query: 74 LGRGSAGLVYK------GVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFG 127
LG G+ G VYK G L + +V+ K + + E+E L+ HP +V L G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYIVEIEILATCDHPYIVKLLG 75
Query: 128 CCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVH 187
G+ +++ EFC G + +L D LT + + R AL +LH I+H
Sbjct: 76 AYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIH 132
Query: 188 RDIKLTNILLTEKLEPKLSDFGLA----KMLGMEESKVFTDVRGTIGYMDPEY-----MT 238
RD+K N+L+T + + +L+DFG++ K L +S + GT +M PE M
Sbjct: 133 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-----GTPYWMAPEVVMCETMK 187
Query: 239 NAKLTCASDIYSFGIVALQL 258
+ +DI+S GI +++
Sbjct: 188 DTPYDYKADIWSLGITLIEM 207
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 20/197 (10%)
Query: 74 LGRGSAGLVYKGVLPSGQV-VAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY+GV + VA+K + + + F +E + ++HPNLV L G C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 287
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI------ 185
Y++ EF GNL +L R A+ L Y+ I +
Sbjct: 288 EPPFYIITEFMTYGNLLDYL----------RECNRQEVSAVVLLYMATQISSAMEYLEKK 337
Query: 186 --VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLT 243
+HR++ N L+ E K++DFGL++++ + + I + PE + K +
Sbjct: 338 NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 397
Query: 244 CASDIYSFGIVALQLLS 260
SD+++FG++ ++ +
Sbjct: 398 IKSDVWAFGVLLWEIAT 414
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 68 DWDR-RFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTD---SFSREVEGLSRVRHPNL 122
DWD + LG G+ G V V + + VA+K + D + +E+ + H N+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV 67
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYID 182
V +G EG QYL E+C+ G L + D + + + YLH
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHGI-- 124
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE-SKVFTDVRGTIGYMDPEYMTNAK 241
I HRDIK N+LL E+ K+SDFGLA + ++ + GT+ Y+ PE + +
Sbjct: 125 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 183
Query: 242 LTCAS-DIYSFGIVALQLLSGQ 262
D++S GIV +L+G+
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 102/223 (45%), Gaps = 22/223 (9%)
Query: 52 GLYRFSKDEIENAINNDWDRRFLGRGSAGLVYK-GVLPSGQVVAIKHIYKSNNTDS---- 106
G+ F ++++E+ + LG G +V K +G+ A K I K + S
Sbjct: 1 GMSTFRQEDVEDHYEMGEE---LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGV 57
Query: 107 ----FSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWER 162
REV L +RHPN++ L + L+ E + G L L K+S LT +
Sbjct: 58 SREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES-LTEDE 116
Query: 163 RVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP----KLSDFGLAKMLGMEE 218
+ L+ + YLH I H D+K NI+L +K P KL DFG+A + E
Sbjct: 117 ATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EA 171
Query: 219 SKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
F ++ GT ++ PE + L +D++S G++ LLSG
Sbjct: 172 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 21/186 (11%)
Query: 93 VAIKHIYKSNNTD---SFSREVEGLSRV-RHPNLVCLFGCCVEGGEQYLVYEFCAAGNLA 148
VA+K + + + D + E++ +S + +H N+V L G C GG ++ E+C G+L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 149 QHLLRKDSVLTWERRVKILRDCALALRYLHHYID------------GCIVHRDIKLTNIL 196
L RK VL + I + L+ R L H+ CI HRD+ N+L
Sbjct: 139 NFLRRKSRVLETDPAFAI-ANSTLSTRDLLHFSSQVAQGMAFLASKNCI-HRDVAARNVL 196
Query: 197 LTEKLEPKLSDFGLAKMLGMEESK--VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIV 254
LT K+ DFGLA+ + M +S V + R + +M PE + + T SD++S+GI+
Sbjct: 197 LTNGHVAKIGDFGLARDI-MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGIL 255
Query: 255 ALQLLS 260
++ S
Sbjct: 256 LWEIFS 261
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 26/200 (13%)
Query: 74 LGRGSAGLVYK------GVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFG 127
LG G+ G VYK G L + +V+ K + + E+E L+ HP +V L G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYIVEIEILATCDHPYIVKLLG 83
Query: 128 CCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVH 187
G+ +++ EFC G + +L D LT + + R AL +LH I+H
Sbjct: 84 AYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIH 140
Query: 188 RDIKLTNILLTEKLEPKLSDFGLA----KMLGMEESKVFTDVRGTIGYMDPEY-----MT 238
RD+K N+L+T + + +L+DFG++ K L +S + GT +M PE M
Sbjct: 141 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-----GTPYWMAPEVVMCETMK 195
Query: 239 NAKLTCASDIYSFGIVALQL 258
+ +DI+S GI +++
Sbjct: 196 DTPYDYKADIWSLGITLIEM 215
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 68 DWDR-RFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTD---SFSREVEGLSRVRHPNL 122
DWD + LG G+ G V V + + VA+K + D + +E+ + H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV 66
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYID 182
V +G EG QYL E+C+ G L + D + + + YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHGI-- 123
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE-SKVFTDVRGTIGYMDPEYMTNAK 241
I HRDIK N+LL E+ K+SDFGLA + ++ + GT+ Y+ PE + +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 242 LTCAS-DIYSFGIVALQLLSGQ 262
D++S GIV +L+G+
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 6/213 (2%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG G G V+ G VAIK + + +SF E + + +++H LV L+ E
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSEE 76
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDS-VLTWERRVKILRDCALALRYLHHYIDGCIVHRDIK 191
Y+V E+ G+L L + L V + A + Y+ +HRD++
Sbjct: 77 -PIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLR 132
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
NIL+ L K++DFGLA+++ E + I + PE + T SD++SF
Sbjct: 133 SANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 192
Query: 252 GIVALQLLSGQKVIELDFDARDQLTRKARDVSM 284
GI+ +L++ +V + R+ L + R M
Sbjct: 193 GILLTELVTKGRVPYPGMNNREVLEQVERGYRM 225
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 78/161 (48%), Gaps = 10/161 (6%)
Query: 105 DSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRV 164
+ REV L +RHPN++ L + L+ E + G L L K+S LT +
Sbjct: 53 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES-LTEDEAT 111
Query: 165 KILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP----KLSDFGLAKMLGMEESK 220
+ L+ + YLH I H D+K NI+L +K P KL DFG+A + E
Sbjct: 112 QFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGN 166
Query: 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
F ++ GT ++ PE + L +D++S G++ LLSG
Sbjct: 167 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 98/200 (49%), Gaps = 13/200 (6%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ----VVAIKHIYKS---NNTDSFSREVEGLSRVRHPNLVC 124
R LG G G VY+GV + + VA+K K +N + F E + + HP++V
Sbjct: 14 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 73
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLR-KDSVLTWERRVKILRDCALALRYLHHYIDG 183
L G +E +++ E G L +L R K+S+ + L+ C A+ YL
Sbjct: 74 LIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICK-AMAYLESI--N 129
Query: 184 CIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLT 243
C VHRDI + NIL+ KL DFGL++ + E+ + R I +M PE + + T
Sbjct: 130 C-VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 188
Query: 244 CASDIYSFGIVALQLLSGQK 263
ASD++ F + ++LS K
Sbjct: 189 TASDVWMFAVCMWEILSFGK 208
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 102/216 (47%), Gaps = 26/216 (12%)
Query: 73 FLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFG 127
+G GS G+V K +G++VAIK +S++ RE++ L ++RH NLV L
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 128 CCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC--- 184
C + YLV+EF L L + + D + +YL I+G
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDLELFPNGL-----------DYQVVQKYLFQIINGIGFC 140
Query: 185 ----IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMT-N 239
I+HRDIK NIL+++ KL DFG A+ L +V+ D T Y PE + +
Sbjct: 141 HSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAA-PGEVYDDEVATRWYRAPELLVGD 199
Query: 240 AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQL 275
K A D+++ G + ++ G+ + D D DQL
Sbjct: 200 VKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDI-DQL 234
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 96/195 (49%), Gaps = 13/195 (6%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G GS G+V+K +GQ+VAIK +S + RE+ L +++HPNLV L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVK-ILRDCALALRYLHHYIDGCIVH 187
+LV+E+C L H L + E VK I A+ + H + CI H
Sbjct: 71 FRRKRRLHLVFEYCDHTVL--HELDRYQRGVPEHLVKSITWQTLQAVNFCHKH--NCI-H 125
Query: 188 RDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMT-NAKLTCAS 246
RD+K NIL+T+ KL DFG A++L S + D T Y PE + + +
Sbjct: 126 RDVKPENILITKHSVIKLCDFGFARLL-TGPSDYYDDEVATRWYRSPELLVGDTQYGPPV 184
Query: 247 DIYSFGIVALQLLSG 261
D+++ G V +LLSG
Sbjct: 185 DVWAIGCVFAELLSG 199
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 78/161 (48%), Gaps = 10/161 (6%)
Query: 105 DSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRV 164
+ REV L +RHPN++ L + L+ E + G L L K+S LT +
Sbjct: 74 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES-LTEDEAT 132
Query: 165 KILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP----KLSDFGLAKMLGMEESK 220
+ L+ + YLH I H D+K NI+L +K P KL DFG+A + E
Sbjct: 133 QFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGN 187
Query: 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
F ++ GT ++ PE + L +D++S G++ LLSG
Sbjct: 188 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 117/263 (44%), Gaps = 19/263 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYK-SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG G G+V G VA+K I + S + D F +E + + ++ HP LV +G C +
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKE 75
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKL 192
Y+V E+ + G L +L L + +++ D + +L + +HRD+
Sbjct: 76 YPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAA 132
Query: 193 TNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFG 252
N L+ L K+SDFG+ + + ++ + + + PE K + SD+++FG
Sbjct: 133 RNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFG 192
Query: 253 IVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKI 312
I+ ++ S K + D ++ K VS G R + P L + +I +I
Sbjct: 193 ILMWEVFSLGK-MPYDLYTNSEVVLK---VSQGHRLYR----PHLASD-------TIYQI 237
Query: 313 AVLCVAKSSKGRPTIDVVYEEID 335
C + + RPT + I+
Sbjct: 238 MYSCWHELPEKRPTFQQLLSSIE 260
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 115/265 (43%), Gaps = 37/265 (13%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYK-SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG G G V+ G VA+K + + S + D+F E + +++H LV L+ +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE 76
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSV-LTWERRVKILRDCALALRYLHHYIDGCIVHRDIK 191
Y++ E+ G+L L + LT + + + A + ++ + +HR+++
Sbjct: 77 -PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRNLR 132
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
NIL+++ L K++DFGLA+++ E + I + PE + T SD++SF
Sbjct: 133 AANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 192
Query: 252 GIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRAD------ 305
GI+ ++ V+ G+ P +P + N+ R
Sbjct: 193 GILLTEI-----------------------VTHGRIPYPGMTNPEVIQNLERGYRMVRPD 229
Query: 306 --FESILKIAVLCVAKSSKGRPTID 328
E + ++ LC + + RPT D
Sbjct: 230 NCPEELYQLMRLCWKERPEDRPTFD 254
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 92/186 (49%), Gaps = 21/186 (11%)
Query: 93 VAIKHIYKSNNTD---SFSREVEGLSRV-RHPNLVCLFGCCVEGGEQYLVYEFCAAGNLA 148
VA+K + + + D + E++ +S + +H N+V L G C GG ++ E+C G+L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 149 QHLLRKDSVLTWERRVKILRDCALALRYLHHYID------------GCIVHRDIKLTNIL 196
L RK VL + I A + R L H+ CI HRD+ N+L
Sbjct: 139 NFLRRKSRVLETDPAFAIANSTA-STRDLLHFSSQVAQGMAFLASKNCI-HRDVAARNVL 196
Query: 197 LTEKLEPKLSDFGLAKMLGMEESK--VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIV 254
LT K+ DFGLA+ + M +S V + R + +M PE + + T SD++S+GI+
Sbjct: 197 LTNGHVAKIGDFGLARDI-MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGIL 255
Query: 255 ALQLLS 260
++ S
Sbjct: 256 LWEIFS 261
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
Query: 74 LGRGSAGLVYKGVLPSGQV-VAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY+GV + VA+K + + + F +E + ++HPNLV L G C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 284
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG-CIVHRDI 190
Y++ EF GNL +L + E +L A + Y++ +HR++
Sbjct: 285 EPPFYIITEFMTYGNLLDYLRECNRQ---EVNAVVLLYMATQISSAMEYLEKKNFIHRNL 341
Query: 191 KLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYS 250
N L+ E K++DFGL++++ + + I + PE + K + SD+++
Sbjct: 342 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 401
Query: 251 FGIVALQLLS 260
FG++ ++ +
Sbjct: 402 FGVLLWEIAT 411
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 11/202 (5%)
Query: 68 DWDR-RFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTD---SFSREVEGLSRVRHPNL 122
DWD + LG G+AG V V + + VA+K + D + +E+ + H N+
Sbjct: 7 DWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYID 182
V +G EG QYL E+C+ G L + D + + + YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHGI-- 123
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE-SKVFTDVRGTIGYMDPEYMTNAK 241
I HRDIK N+LL E+ K+SDFGLA + ++ + GT+ Y+ PE + +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 242 LTCAS-DIYSFGIVALQLLSGQ 262
D++S GIV +L+G+
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 98/200 (49%), Gaps = 13/200 (6%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ----VVAIKHIYKS---NNTDSFSREVEGLSRVRHPNLVC 124
R LG G G VY+GV + + VA+K K +N + F E + + HP++V
Sbjct: 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 77
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLR-KDSVLTWERRVKILRDCALALRYLHHYIDG 183
L G +E +++ E G L +L R K+S+ + L+ C A+ YL
Sbjct: 78 LIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICK-AMAYLESI--N 133
Query: 184 CIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLT 243
C VHRDI + NIL+ KL DFGL++ + E+ + R I +M PE + + T
Sbjct: 134 C-VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 192
Query: 244 CASDIYSFGIVALQLLSGQK 263
ASD++ F + ++LS K
Sbjct: 193 TASDVWMFAVCMWEILSFGK 212
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 98/200 (49%), Gaps = 13/200 (6%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ----VVAIKHIYKS---NNTDSFSREVEGLSRVRHPNLVC 124
R LG G G VY+GV + + VA+K K +N + F E + + HP++V
Sbjct: 30 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 89
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLR-KDSVLTWERRVKILRDCALALRYLHHYIDG 183
L G +E +++ E G L +L R K+S+ + L+ C A+ YL
Sbjct: 90 LIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICK-AMAYLESI--N 145
Query: 184 CIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLT 243
C VHRDI + NIL+ KL DFGL++ + E+ + R I +M PE + + T
Sbjct: 146 C-VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 204
Query: 244 CASDIYSFGIVALQLLSGQK 263
ASD++ F + ++LS K
Sbjct: 205 TASDVWMFAVCMWEILSFGK 224
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 13/202 (6%)
Query: 72 RFLGRGSAGLVY-------KGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVC 124
RFLG+G Y K V +G+VV + K + + S E+ + +P++V
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVF-AGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVG 106
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
G + Y+V E C +L + R+ +V E R +R ++YLH +
Sbjct: 107 FHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQYLH---NNR 162
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTC 244
++HRD+KL N+ L + ++ K+ DFGLA + + + T + GT Y+ PE + +
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LCGTPNYIAPEVLCKKGHSF 221
Query: 245 ASDIYSFGIVALQLLSGQKVIE 266
DI+S G + LL G+ E
Sbjct: 222 EVDIWSLGCILYTLLVGKPPFE 243
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
Query: 74 LGRGSAGLVYKGVLPSGQV-VAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY+GV + VA+K + + + F +E + ++HPNLV L G C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 326
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG-CIVHRDI 190
Y++ EF GNL +L + E +L A + Y++ +HR++
Sbjct: 327 EPPFYIITEFMTYGNLLDYLRECNRQ---EVNAVVLLYMATQISSAMEYLEKKNFIHRNL 383
Query: 191 KLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYS 250
N L+ E K++DFGL++++ + + I + PE + K + SD+++
Sbjct: 384 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 443
Query: 251 FGIVALQLLS 260
FG++ ++ +
Sbjct: 444 FGVLLWEIAT 453
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 10/163 (6%)
Query: 107 FSREVEGLSRVRHPNLVCLFGC----CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWER 162
F RE + + + HP +V ++ G Y+V E+ L + ++ + +T +R
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTL-RDIVHTEGPMTPKR 117
Query: 163 RVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVF 222
++++ D AL + H I+HRD+K NIL++ K+ DFG+A+ + + V
Sbjct: 118 AIEVIADACQALNFSHQ---NGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVX 174
Query: 223 --TDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQK 263
V GT Y+ PE + SD+YS G V ++L+G+
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP 217
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 86/179 (48%), Gaps = 12/179 (6%)
Query: 89 SGQVVAIKHIYKS---NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+G++ A+K I K S E+ L +++H N+V L YLV + + G
Sbjct: 46 TGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGG 105
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPK- 204
L ++ K T + ++R A+ YLH IVHRD+K N+L + E
Sbjct: 106 ELFDRIVEK-GFYTEKDASTLIRQVLDAVYYLHRM---GIVHRDLKPENLLYYSQDEESK 161
Query: 205 --LSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+SDFGL+KM G + V + GT GY+ PE + + A D +S G++A LL G
Sbjct: 162 IMISDFGLSKMEG--KGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 94/193 (48%), Gaps = 10/193 (5%)
Query: 74 LGRGSAGLVYK-GVLPSGQVVAIKHIY---KSNNTDSFSREVEGLSRVRHPNLVCLFGCC 129
LG G+ G+V+K PSG V+A K I+ K + RE++ L P +V +G
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 76
Query: 130 VEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRD 189
GE + E G+L Q +L+K + + K+ L YL I+HRD
Sbjct: 77 YSDGEISICMEHMDGGSLDQ-VLKKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRD 133
Query: 190 IKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIY 249
+K +NIL+ + E KL DFG++ L E + F GT YM PE + + SDI+
Sbjct: 134 VKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFV---GTRSYMSPERLQGTHYSVQSDIW 190
Query: 250 SFGIVALQLLSGQ 262
S G+ +++ G+
Sbjct: 191 SMGLSLVEMAVGR 203
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 28/213 (13%)
Query: 71 RRFLGRGSAGLVY----KGVLPSGQ--VVAIKHIYKS--NNTDSFSREVEGLSRVRHPNL 122
+R LG G+ G V+ + P +VA+K + + N F RE E L+ ++H ++
Sbjct: 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHI 77
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRK--DSV----------LTWERRVKILRDC 170
V +G CVEG +V+E+ G+L + L D+V LT + + I +
Sbjct: 78 VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI 137
Query: 171 ALALRYL--HHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAK-MLGMEESKVFTDVRG 227
A + YL H+ VHRD+ N L+ E L K+ DFG+++ + + +V
Sbjct: 138 AAGMVYLASQHF-----VHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTML 192
Query: 228 TIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
I +M PE + K T SD++S G+V ++ +
Sbjct: 193 PIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 80/163 (49%), Gaps = 10/163 (6%)
Query: 107 FSREVEGLSRVRHPNLVCLFGC----CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWER 162
F RE + + + HP +V ++ G Y+V E+ L + ++ + +T +R
Sbjct: 59 FRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTL-RDIVHTEGPMTPKR 117
Query: 163 RVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVF 222
++++ D AL + H I+HRD+K NI+++ K+ DFG+A+ + + V
Sbjct: 118 AIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 174
Query: 223 --TDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQK 263
V GT Y+ PE + SD+YS G V ++L+G+
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP 217
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 68 DWDR-RFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTD---SFSREVEGLSRVRHPNL 122
DWD + LG G+ G V V + + VA+K + D + +E+ + H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYID 182
V +G EG QYL E+C+ G L + D + + + YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHGI-- 123
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE-SKVFTDVRGTIGYMDPEYMTNAK 241
I HRDIK N+LL E+ K+SDFGLA + ++ + GT+ Y+ PE + +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 242 LTCAS-DIYSFGIVALQLLSGQ 262
D++S GIV +L+G+
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 68 DWDR-RFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTD---SFSREVEGLSRVRHPNL 122
DWD + LG G+ G V V + + VA+K + D + +E+ + H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV 66
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYID 182
V +G EG QYL E+C+ G L + D + + + YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHGI-- 123
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE-SKVFTDVRGTIGYMDPEYMTNAK 241
I HRDIK N+LL E+ K+SDFGLA + ++ + GT+ Y+ PE + +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 242 LTCAS-DIYSFGIVALQLLSGQ 262
D++S GIV +L+G+
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 21/204 (10%)
Query: 72 RFLGRGSAG---LVYKGVLPSGQVVAIKHIYKS-----NNTDSFSREVEGLSRVRHPNLV 123
R +G+GS G +V K + ++ A+K++ K N + +E++ + + HP LV
Sbjct: 21 RAIGKGSFGKVCIVQKN--DTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLV 78
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILR-DCALALRYLHHYID 182
L+ + + ++V + G+L HL + +V E VK+ + +AL YL +
Sbjct: 79 NLWYSFQDEEDMFMVVDLLLGGDLRYHL--QQNVHFKEETVKLFICELVMALDYLQ---N 133
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAK- 241
I+HRD+K NILL E ++DF +A ML E T + GT YM PE ++ K
Sbjct: 134 QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ--ITTMAGTKPYMAPEMFSSRKG 191
Query: 242 --LTCASDIYSFGIVALQLLSGQK 263
+ A D +S G+ A +LL G++
Sbjct: 192 AGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 68 DWDR-RFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTD---SFSREVEGLSRVRHPNL 122
DWD + LG G+ G V V + + VA+K + D + +E+ + H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYID 182
V +G EG QYL E+C+ G L + D + + + YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHGI-- 123
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE-SKVFTDVRGTIGYMDPEYMTNAK 241
I HRDIK N+LL E+ K+SDFGLA + ++ + GT+ Y+ PE + +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 242 LTCAS-DIYSFGIVALQLLSGQ 262
D++S GIV +L+G+
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 80/163 (49%), Gaps = 10/163 (6%)
Query: 107 FSREVEGLSRVRHPNLVCLFGC----CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWER 162
F RE + + + HP +V ++ G Y+V E+ L + ++ + +T +R
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTL-RDIVHTEGPMTPKR 117
Query: 163 RVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVF 222
++++ D AL + H I+HRD+K NI+++ K+ DFG+A+ + + V
Sbjct: 118 AIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 174
Query: 223 --TDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQK 263
V GT Y+ PE + SD+YS G V ++L+G+
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP 217
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 80/163 (49%), Gaps = 10/163 (6%)
Query: 107 FSREVEGLSRVRHPNLVCLFGC----CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWER 162
F RE + + + HP +V ++ G Y+V E+ L + ++ + +T +R
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTL-RDIVHTEGPMTPKR 117
Query: 163 RVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVF 222
++++ D AL + H I+HRD+K NI+++ K+ DFG+A+ + + V
Sbjct: 118 AIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 174
Query: 223 --TDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQK 263
V GT Y+ PE + SD+YS G V ++L+G+
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP 217
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 68 DWDR-RFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTD---SFSREVEGLSRVRHPNL 122
DWD + LG G+ G V V + + VA+K + D + +E+ + H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYID 182
V +G EG QYL E+C+ G L + D + + + YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHGI-- 123
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE-SKVFTDVRGTIGYMDPEYMTNAK 241
I HRDIK N+LL E+ K+SDFGLA + ++ + GT+ Y+ PE + +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 242 LTCAS-DIYSFGIVALQLLSGQ 262
D++S GIV +L+G+
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 80/163 (49%), Gaps = 10/163 (6%)
Query: 107 FSREVEGLSRVRHPNLVCLFGC----CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWER 162
F RE + + + HP +V ++ G Y+V E+ L + ++ + +T +R
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTL-RDIVHTEGPMTPKR 117
Query: 163 RVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVF 222
++++ D AL + H I+HRD+K NI+++ K+ DFG+A+ + + V
Sbjct: 118 AIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 174
Query: 223 --TDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQK 263
V GT Y+ PE + SD+YS G V ++L+G+
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP 217
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 13/199 (6%)
Query: 74 LGRGSAGLVYKGV--LPSGQV-VAIKHIYKSN---NTDSFSREVEGLSRVRHPNLVCLFG 127
LG G+ G V +GV + Q+ VAIK + + +T+ RE + + ++ +P +V L G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 128 CCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVH 187
C + LV E G L + L+ K + ++L ++ ++YL + VH
Sbjct: 404 VC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVH 459
Query: 188 RDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRG--TIGYMDPEYMTNAKLTCA 245
R++ N+LL + K+SDFGL+K LG ++S G + + PE + K +
Sbjct: 460 RNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSR 519
Query: 246 SDIYSFGIVALQLLS-GQK 263
SD++S+G+ + LS GQK
Sbjct: 520 SDVWSYGVTMWEALSYGQK 538
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 10/161 (6%)
Query: 105 DSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRV 164
+ REV L ++HPN++ L + L+ E A G L L K+S LT E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEAT 117
Query: 165 KILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP----KLSDFGLAKMLGMEESK 220
+ L+ + YLH I H D+K NI+L ++ P K+ DFGLA +
Sbjct: 118 EFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF--GN 172
Query: 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
F ++ GT ++ PE + L +D++S G++ LLSG
Sbjct: 173 EFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 13/202 (6%)
Query: 72 RFLGRGSAGLVY-------KGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVC 124
RFLG+G Y K V +G+VV + K + + S E+ + +P++V
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVF-AGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVG 106
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
G + Y+V E C +L + R+ +V E R +R ++YLH +
Sbjct: 107 FHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQYLH---NNR 162
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTC 244
++HRD+KL N+ L + ++ K+ DFGLA + + + + GT Y+ PE + +
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK-KXLCGTPNYIAPEVLCKKGHSF 221
Query: 245 ASDIYSFGIVALQLLSGQKVIE 266
DI+S G + LL G+ E
Sbjct: 222 EVDIWSLGCILYTLLVGKPPFE 243
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 10/161 (6%)
Query: 105 DSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRV 164
+ REV L ++HPN++ L + L+ E A G L L K+S LT E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEAT 117
Query: 165 KILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP----KLSDFGLAKMLGMEESK 220
+ L+ + YLH I H D+K NI+L ++ P K+ DFGLA +
Sbjct: 118 EFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF--GN 172
Query: 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
F ++ GT ++ PE + L +D++S G++ LLSG
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 16/200 (8%)
Query: 71 RRFLGRGSAGLVY------KGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVC 124
+R LG+GS G V G + +V++ + + + + +S REV+ L ++ HPN++
Sbjct: 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 90
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
L+ + G YLV E G L ++ + + +I+R + Y+H
Sbjct: 91 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSGITYMHK---NK 146
Query: 185 IVHRDIKLTNILLTEKLEP---KLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAK 241
IVHRD+K N+LL K + ++ DFGL+ E SK D GT Y+ PE + +
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKIGTAYYIAPEVL-HGT 203
Query: 242 LTCASDIYSFGIVALQLLSG 261
D++S G++ LLSG
Sbjct: 204 YDEKCDVWSTGVILYILLSG 223
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 10/161 (6%)
Query: 105 DSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRV 164
+ REV L ++HPN++ L + L+ E A G L L K+S LT E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEAT 117
Query: 165 KILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP----KLSDFGLAKMLGMEESK 220
+ L+ + YLH I H D+K NI+L ++ P K+ DFGLA +
Sbjct: 118 EFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF--GN 172
Query: 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
F ++ GT ++ PE + L +D++S G++ LLSG
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTDSFSREVEGLSR-------VRHPNLVCL 125
+G+G+ +V + + +GQ A+K + + T S E L R ++HP++V L
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLL-RKDSVLTWERRV--KILRDCALALRYLHHYID 182
G Y+V+EF +L ++ R D+ + V +R ALRY H D
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---D 148
Query: 183 GCIVHRDIKLTNILLTEKLEP---KLSDFGLAKMLGMEESKVFTDVR-GTIGYMDPEYMT 238
I+HRD+K N+LL K KL DFG+A LG ES + R GT +M PE +
Sbjct: 149 NNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLG--ESGLVAGGRVGTPHFMAPEVVK 206
Query: 239 NAKLTCASDIYSFGIVALQLLSG 261
D++ G++ LLSG
Sbjct: 207 REPYGKPVDVWGCGVILFILLSG 229
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 10/161 (6%)
Query: 105 DSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRV 164
+ REV L ++HPN++ L + L+ E A G L L K+S LT E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEAT 117
Query: 165 KILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP----KLSDFGLAKMLGMEESK 220
+ L+ + YLH I H D+K NI+L ++ P K+ DFGLA +
Sbjct: 118 EFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF--GN 172
Query: 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
F ++ GT ++ PE + L +D++S G++ LLSG
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 10/161 (6%)
Query: 105 DSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRV 164
+ REV L ++HPN++ L + L+ E A G L L K+S LT E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEAT 117
Query: 165 KILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP----KLSDFGLAKMLGMEESK 220
+ L+ + YLH I H D+K NI+L ++ P K+ DFGLA +
Sbjct: 118 EFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF--GN 172
Query: 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
F ++ GT ++ PE + L +D++S G++ LLSG
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 94/195 (48%), Gaps = 13/195 (6%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIK-----HIYKSNNTDSFSREVEGLSRVRHPNLVCLFG 127
LG G+ G V G +G VA+K I + RE++ L RHP+++ L+
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 128 CCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVH 187
+ ++V E+ + G L ++ + V E R ++ + A+ Y H ++ +VH
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCHRHM---VVH 134
Query: 188 RDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCAS- 246
RD+K N+LL + K++DFGL+ M M + + D G+ Y PE ++
Sbjct: 135 RDLKPENVLLDAHMNAKIADFGLSNM--MSDGEFLRDSCGSPNYAAPEVISGRLYAGPEV 192
Query: 247 DIYSFGIVALQLLSG 261
DI+S G++ LL G
Sbjct: 193 DIWSCGVILYALLCG 207
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 10/161 (6%)
Query: 105 DSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRV 164
+ REV L ++HPN++ L + L+ E A G L L K+S LT E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEAT 117
Query: 165 KILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP----KLSDFGLAKMLGMEESK 220
+ L+ + YLH I H D+K NI+L ++ P K+ DFGLA +
Sbjct: 118 EFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF--GN 172
Query: 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
F ++ GT ++ PE + L +D++S G++ LLSG
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 80/163 (49%), Gaps = 10/163 (6%)
Query: 107 FSREVEGLSRVRHPNLVCLFGC----CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWER 162
F RE + + + HP +V ++ G Y+V E+ L + ++ + +T +R
Sbjct: 76 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTL-RDIVHTEGPMTPKR 134
Query: 163 RVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVF 222
++++ D AL + H I+HRD+K NI+++ K+ DFG+A+ + + V
Sbjct: 135 AIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 191
Query: 223 --TDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQK 263
V GT Y+ PE + SD+YS G V ++L+G+
Sbjct: 192 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP 234
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 10/161 (6%)
Query: 105 DSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRV 164
+ REV L ++HPN++ L + L+ E A G L L K+S LT E
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEAT 116
Query: 165 KILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP----KLSDFGLAKMLGMEESK 220
+ L+ + YLH I H D+K NI+L ++ P K+ DFGLA +
Sbjct: 117 EFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF--GN 171
Query: 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
F ++ GT ++ PE + L +D++S G++ LLSG
Sbjct: 172 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 103/215 (47%), Gaps = 17/215 (7%)
Query: 73 FLGRGSAGLVYKGV-LPSGQVVAIKHI---YKSNNTDSFSR----EVEGLSRVRHPNLVC 124
FLG G VYK + Q+VAIK I ++S D +R E++ L + HPN++
Sbjct: 17 FLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIG 76
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCAL-ALRYLHHYIDG 183
L LV++F + +++ +S++ +K L L YLH +
Sbjct: 77 LLDAFGHKSNISLVFDFMETD--LEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH--- 131
Query: 184 CIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKL- 242
I+HRD+K N+LL E KL+DFGLAK G ++ + T Y PE + A++
Sbjct: 132 WILHRDLKPNNLLLDENGVLKLADFGLAKSFG-SPNRAYXHQVVTRWYRAPELLFGARMY 190
Query: 243 TCASDIYSFGIVALQLLSGQKVIELDFDARDQLTR 277
D+++ G + +LL + D D DQLTR
Sbjct: 191 GVGVDMWAVGCILAELLLRVPFLPGDSDL-DQLTR 224
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 94/196 (47%), Gaps = 10/196 (5%)
Query: 74 LGRGSAGLVYK-GVLPSGQVVAIKHIY---KSNNTDSFSREVEGLSRVRHPNLVCLFGCC 129
LG G+ G+V+K PSG V+A K I+ K + RE++ L P +V +G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 130 VEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRD 189
GE + E G+L Q +L+K + + K+ L YL I+HRD
Sbjct: 74 YSDGEISICMEHMDGGSLDQ-VLKKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRD 130
Query: 190 IKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIY 249
+K +NIL+ + E KL DFG++ L + F GT YM PE + + SDI+
Sbjct: 131 VKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSVQSDIW 187
Query: 250 SFGIVALQLLSGQKVI 265
S G+ +++ G+ I
Sbjct: 188 SMGLSLVEMAVGRYPI 203
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 10/161 (6%)
Query: 105 DSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRV 164
+ REV L ++HPN++ L + L+ E A G L L K+S LT E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEAT 117
Query: 165 KILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP----KLSDFGLAKMLGMEESK 220
+ L+ + YLH I H D+K NI+L ++ P K+ DFGLA +
Sbjct: 118 EFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF--GN 172
Query: 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
F ++ GT ++ PE + L +D++S G++ LLSG
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 10/161 (6%)
Query: 105 DSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRV 164
+ REV L ++HPN++ L + L+ E A G L L K+S LT E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEAT 117
Query: 165 KILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP----KLSDFGLAKMLGMEESK 220
+ L+ + YLH I H D+K NI+L ++ P K+ DFGLA +
Sbjct: 118 EFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF--GN 172
Query: 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
F ++ GT ++ PE + L +D++S G++ LLSG
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 118/271 (43%), Gaps = 22/271 (8%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG G G V+ G + VA+K + + +F E + ++H LV L+
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTRE 80
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDS--VLTWERRVKILRDCALALRYLHHYIDGCIVHRDI 190
Y++ E+ A G+L L + VL + + A + Y+ +HRD+
Sbjct: 81 EPIYIITEYMAKGSLLDFLKSDEGGKVLL-PKLIDFSAQIAEGMAYIER---KNYIHRDL 136
Query: 191 KLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYS 250
+ N+L++E L K++DFGLA+++ E + I + PE + T SD++S
Sbjct: 137 RAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWS 196
Query: 251 FGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESIL 310
FGI+ ++++ K+ D +T ++ M PR+ N D +
Sbjct: 197 FGILLYEIVTYGKIPYPGRTNADVMTALSQGYRM----------PRVE---NCPD--ELY 241
Query: 311 KIAVLCVAKSSKGRPTIDVVYEEIDKAWKNT 341
I +C + ++ RPT D + +D + T
Sbjct: 242 DIMKMCWKEKAEERPTFDYLQSVLDDFYTAT 272
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 10/161 (6%)
Query: 105 DSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRV 164
+ REV L ++HPN++ L + L+ E A G L L K+S LT E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEAT 117
Query: 165 KILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP----KLSDFGLAKMLGMEESK 220
+ L+ + YLH I H D+K NI+L ++ P K+ DFGLA +
Sbjct: 118 EFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF--GN 172
Query: 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
F ++ GT ++ PE + L +D++S G++ LLSG
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 10/161 (6%)
Query: 105 DSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRV 164
+ REV L ++HPN++ L + L+ E A G L L K+S LT E
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEAT 116
Query: 165 KILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP----KLSDFGLAKMLGMEESK 220
+ L+ + YLH I H D+K NI+L ++ P K+ DFGLA +
Sbjct: 117 EFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF--GN 171
Query: 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
F ++ GT ++ PE + L +D++S G++ LLSG
Sbjct: 172 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 11/202 (5%)
Query: 68 DWDR-RFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTD---SFSREVEGLSRVRHPNL 122
DWD + LG G+ G V V + + VA+K + D + +E+ + + H N+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENV 67
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYID 182
V +G EG QYL E+C+ G L + D + + + YLH
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHGI-- 124
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE-SKVFTDVRGTIGYMDPEYMTNAK 241
I HRDIK N+LL E+ K+SDFGLA + ++ + GT+ Y+ PE + +
Sbjct: 125 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 242 LTCAS-DIYSFGIVALQLLSGQ 262
D++S GIV +L+G+
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 10/161 (6%)
Query: 105 DSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRV 164
+ REV L ++HPN++ L + L+ E A G L L K+S LT E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEAT 117
Query: 165 KILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP----KLSDFGLAKMLGMEESK 220
+ L+ + YLH I H D+K NI+L ++ P K+ DFGLA +
Sbjct: 118 EFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF--GN 172
Query: 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
F ++ GT ++ PE + L +D++S G++ LLSG
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 94/196 (47%), Gaps = 10/196 (5%)
Query: 74 LGRGSAGLVYK-GVLPSGQVVAIKHIY---KSNNTDSFSREVEGLSRVRHPNLVCLFGCC 129
LG G+ G+V+K PSG V+A K I+ K + RE++ L P +V +G
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 100
Query: 130 VEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRD 189
GE + E G+L Q +L+K + + K+ L YL I+HRD
Sbjct: 101 YSDGEISICMEHMDGGSLDQ-VLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRD 157
Query: 190 IKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIY 249
+K +NIL+ + E KL DFG++ L + F GT YM PE + + SDI+
Sbjct: 158 VKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSVQSDIW 214
Query: 250 SFGIVALQLLSGQKVI 265
S G+ +++ G+ I
Sbjct: 215 SMGLSLVEMAVGRYPI 230
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 94/196 (47%), Gaps = 10/196 (5%)
Query: 74 LGRGSAGLVYK-GVLPSGQVVAIKHIY---KSNNTDSFSREVEGLSRVRHPNLVCLFGCC 129
LG G+ G+V+K PSG V+A K I+ K + RE++ L P +V +G
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 135
Query: 130 VEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRD 189
GE + E G+L Q +L+K + + K+ L YL I+HRD
Sbjct: 136 YSDGEISICMEHMDGGSLDQ-VLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRD 192
Query: 190 IKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIY 249
+K +NIL+ + E KL DFG++ L + F GT YM PE + + SDI+
Sbjct: 193 VKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSVQSDIW 249
Query: 250 SFGIVALQLLSGQKVI 265
S G+ +++ G+ I
Sbjct: 250 SMGLSLVEMAVGRYPI 265
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 89/181 (49%), Gaps = 14/181 (7%)
Query: 89 SGQVVAIKHIYKS---NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQ--YLVYEFCA 143
+G+ VA+K + N+ +E+E L + H N+V G C E G L+ EF
Sbjct: 49 TGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLP 108
Query: 144 AGNLAQHLLRKDSVLTWERRVKILRDCALALRYL--HHYIDGCIVHRDIKLTNILLTEKL 201
+G+L ++L + + + ++++K + YL Y VHRD+ N+L+ +
Sbjct: 109 SGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQY-----VHRDLAARNVLVESEH 163
Query: 202 EPKLSDFGLAKMLGM--EESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLL 259
+ K+ DFGL K + E V D + + PE + +K ASD++SFG+ +LL
Sbjct: 164 QVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 223
Query: 260 S 260
+
Sbjct: 224 T 224
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 16/200 (8%)
Query: 71 RRFLGRGSAGLVY------KGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVC 124
+R LG+GS G V G + +V++ + + + + +S REV+ L ++ HPN++
Sbjct: 37 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 96
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
L+ + G YLV E G L ++ + + +I+R + Y+H
Sbjct: 97 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSGITYMH---KNK 152
Query: 185 IVHRDIKLTNILLTEKLEP---KLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAK 241
IVHRD+K N+LL K + ++ DFGL+ E SK D GT Y+ PE + +
Sbjct: 153 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKIGTAYYIAPEVL-HGT 209
Query: 242 LTCASDIYSFGIVALQLLSG 261
D++S G++ LLSG
Sbjct: 210 YDEKCDVWSTGVILYILLSG 229
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 92/196 (46%), Gaps = 13/196 (6%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ-VVAIKHIYKSN-----NTDSFSREVEGLSRVRHPNLVCL 125
R LG+G G VY + ++A+K ++KS RE+E S +RHPN++ +
Sbjct: 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+ + YL+ EF G L + L +K +R + + A AL Y H + +
Sbjct: 80 YNYFHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFMEELADALHYCH---ERKV 135
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
+HRDIK N+L+ K E K++DFG + + GT+ Y+ PE +
Sbjct: 136 IHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC---GTLDYLPPEMIEGKTHDEK 192
Query: 246 SDIYSFGIVALQLLSG 261
D++ G++ + L G
Sbjct: 193 VDLWCAGVLCYEFLVG 208
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 108/217 (49%), Gaps = 24/217 (11%)
Query: 60 EIENAINNDWDRRFLGRGSAGLVYKGVLPSGQV-VAIKHIYK--SNNTDSFSREVEGLSR 116
E + + + DR LG+G+ G+VY G S QV +AIK I + S + E+
Sbjct: 16 EYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKH 75
Query: 117 VRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLR------KDSVLTWERRVKILRDC 170
++H N+V G E G + E G+L+ LLR KD+ T K + +
Sbjct: 76 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSA-LLRSKWGPLKDNEQTIGFYTKQILE- 133
Query: 171 ALALRYLHHYIDGCIVHRDIKLTNILL-TEKLEPKLSDFGLAKML-GMEE-SKVFTDVRG 227
L+YLH D IVHRDIK N+L+ T K+SDFG +K L G+ ++ FT G
Sbjct: 134 --GLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT---G 185
Query: 228 TIGYMDPEYMTNAK--LTCASDIYSFGIVALQLLSGQ 262
T+ YM PE + A+DI+S G +++ +G+
Sbjct: 186 TLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 94/207 (45%), Gaps = 27/207 (13%)
Query: 75 GRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVE--GLSRVRHPNLVCLFGCCVEG 132
RG G V+K L + + VA+K I+ + S+ E E L ++H N++ G G
Sbjct: 33 ARGRFGCVWKAQLLN-EYVAVK-IFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRG 90
Query: 133 G----EQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG----- 183
+ +L+ F G+L+ L K +V++W I A L YLH I G
Sbjct: 91 TSVDVDLWLITAFHEKGSLSDFL--KANVVSWNELCHIAETMARGLAYLHEDIPGLKDGH 148
Query: 184 --CIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIG---YMDPEYMT 238
I HRDIK N+LL L ++DFGLA L E K D G +G YM PE +
Sbjct: 149 KPAISHRDIKSKNVLLKNNLTACIADFGLA--LKFEAGKSAGDTHGQVGTRRYMAPEVLE 206
Query: 239 NA-----KLTCASDIYSFGIVALQLLS 260
A D+Y+ G+V +L S
Sbjct: 207 GAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 94/196 (47%), Gaps = 10/196 (5%)
Query: 74 LGRGSAGLVYK-GVLPSGQVVAIKHIY---KSNNTDSFSREVEGLSRVRHPNLVCLFGCC 129
LG G+ G+V+K PSG V+A K I+ K + RE++ L P +V +G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 130 VEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRD 189
GE + E G+L Q +L+K + + K+ L YL I+HRD
Sbjct: 74 YSDGEISICMEHMDGGSLDQ-VLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRD 130
Query: 190 IKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIY 249
+K +NIL+ + E KL DFG++ L + F GT YM PE + + SDI+
Sbjct: 131 VKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSVQSDIW 187
Query: 250 SFGIVALQLLSGQKVI 265
S G+ +++ G+ I
Sbjct: 188 SMGLSLVEMAVGRYPI 203
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 94/196 (47%), Gaps = 10/196 (5%)
Query: 74 LGRGSAGLVYK-GVLPSGQVVAIKHIY---KSNNTDSFSREVEGLSRVRHPNLVCLFGCC 129
LG G+ G+V+K PSG V+A K I+ K + RE++ L P +V +G
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 92
Query: 130 VEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRD 189
GE + E G+L Q +L+K + + K+ L YL I+HRD
Sbjct: 93 YSDGEISICMEHMDGGSLDQ-VLKKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRD 149
Query: 190 IKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIY 249
+K +NIL+ + E KL DFG++ L + F GT YM PE + + SDI+
Sbjct: 150 VKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSVQSDIW 206
Query: 250 SFGIVALQLLSGQKVI 265
S G+ +++ G+ I
Sbjct: 207 SMGLSLVEMAVGRYPI 222
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 14/202 (6%)
Query: 67 NDWD-RRFLGRGSAGLVYKGVLPSGQ-VVAIKHIYKSN-----NTDSFSREVEGLSRVRH 119
+D+D R LG+G G VY + ++A+K ++KS RE+E S +RH
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 120 PNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHH 179
PN++ ++ + YL+ EF G L + L +K +R + + A AL Y H
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFMEELADALHYCH- 132
Query: 180 YIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
+ ++HRDIK N+L+ K E K++DFG + + GT+ Y+ PE +
Sbjct: 133 --ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC---GTLDYLPPEMIEG 187
Query: 240 AKLTCASDIYSFGIVALQLLSG 261
D++ G++ + L G
Sbjct: 188 KTHDEKVDLWCAGVLCYEFLVG 209
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 14/202 (6%)
Query: 67 NDWD-RRFLGRGSAGLVYKGVLPSGQ-VVAIKHIYKSN-----NTDSFSREVEGLSRVRH 119
+D+D R LG+G G VY + ++A+K ++KS RE+E S +RH
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 120 PNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHH 179
PN++ ++ + YL+ EF G L + L +K +R + + A AL Y H
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFMEELADALHYCH- 131
Query: 180 YIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
+ ++HRDIK N+L+ K E K++DFG + + GT+ Y+ PE +
Sbjct: 132 --ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC---GTLDYLPPEMIEG 186
Query: 240 AKLTCASDIYSFGIVALQLLSG 261
D++ G++ + L G
Sbjct: 187 KTHDEKVDLWCAGVLCYEFLVG 208
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 10/161 (6%)
Query: 105 DSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRV 164
+ REV L ++HPN++ L + L+ E A G L L K+S LT E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEAT 117
Query: 165 KILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP----KLSDFGLAKMLGMEESK 220
+ L+ + YLH I H D+K NI+L ++ P K+ DFGLA +
Sbjct: 118 EFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF--GN 172
Query: 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
F ++ GT ++ PE + L +D++S G++ LLSG
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 100/208 (48%), Gaps = 17/208 (8%)
Query: 66 NNDWDR-RFLGRGSAGLVYK-GVLPSGQVVAIKHIY---KSNNTDSFSREVEGLSRVRHP 120
++D++R LG G+ G+V K PSG ++A K I+ K + RE++ L P
Sbjct: 15 DDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSP 74
Query: 121 NLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSV---LTWERRVKILRDCALALRYL 177
+V +G GE + E G+L Q L + + + + +LR A LR
Sbjct: 75 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAY-LREK 133
Query: 178 HHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYM 237
H I+HRD+K +NIL+ + E KL DFG++ L + F GT YM PE +
Sbjct: 134 HQ-----IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMAPERL 185
Query: 238 TNAKLTCASDIYSFGIVALQLLSGQKVI 265
+ SDI+S G+ ++L G+ I
Sbjct: 186 QGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 94/196 (47%), Gaps = 10/196 (5%)
Query: 74 LGRGSAGLVYK-GVLPSGQVVAIKHIY---KSNNTDSFSREVEGLSRVRHPNLVCLFGCC 129
LG G+ G+V+K PSG V+A K I+ K + RE++ L P +V +G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 130 VEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRD 189
GE + E G+L Q +L+K + + K+ L YL I+HRD
Sbjct: 74 YSDGEISICMEHMDGGSLDQ-VLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRD 130
Query: 190 IKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIY 249
+K +NIL+ + E KL DFG++ L + F GT YM PE + + SDI+
Sbjct: 131 VKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSVQSDIW 187
Query: 250 SFGIVALQLLSGQKVI 265
S G+ +++ G+ I
Sbjct: 188 SMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 94/196 (47%), Gaps = 10/196 (5%)
Query: 74 LGRGSAGLVYK-GVLPSGQVVAIKHIY---KSNNTDSFSREVEGLSRVRHPNLVCLFGCC 129
LG G+ G+V+K PSG V+A K I+ K + RE++ L P +V +G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 130 VEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRD 189
GE + E G+L Q +L+K + + K+ L YL I+HRD
Sbjct: 74 YSDGEISICMEHMDGGSLDQ-VLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRD 130
Query: 190 IKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIY 249
+K +NIL+ + E KL DFG++ L + F GT YM PE + + SDI+
Sbjct: 131 VKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSVQSDIW 187
Query: 250 SFGIVALQLLSGQKVI 265
S G+ +++ G+ I
Sbjct: 188 SMGLSLVEMAVGRYPI 203
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 20/218 (9%)
Query: 53 LYRFSKDEIENAINNDWDRRFLGRGSAGLVYKGVLPSGQV-VAIKHIYKSN-NTDSFSRE 110
LY S D+ E + + LG G G VY GV + VA+K + + + F +E
Sbjct: 19 LYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKE 78
Query: 111 VEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDC 170
+ ++HPNLV L G C Y+V E+ GNL +L R
Sbjct: 79 AAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL----------RECNREEVT 128
Query: 171 ALALRYLHHYIDGCI--------VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVF 222
A+ L Y+ I + +HRD+ N L+ E K++DFGL++++ +
Sbjct: 129 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAH 188
Query: 223 TDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
+ I + PE + + SD+++FG++ ++ +
Sbjct: 189 AGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 108/217 (49%), Gaps = 24/217 (11%)
Query: 60 EIENAINNDWDRRFLGRGSAGLVYKGVLPSGQV-VAIKHIYK--SNNTDSFSREVEGLSR 116
E + + + DR LG+G+ G+VY G S QV +AIK I + S + E+
Sbjct: 2 EYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKH 61
Query: 117 VRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLR------KDSVLTWERRVKILRDC 170
++H N+V G E G + E G+L+ LLR KD+ T K + +
Sbjct: 62 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSA-LLRSKWGPLKDNEQTIGFYTKQILE- 119
Query: 171 ALALRYLHHYIDGCIVHRDIKLTNILL-TEKLEPKLSDFGLAKML-GMEE-SKVFTDVRG 227
L+YLH D IVHRDIK N+L+ T K+SDFG +K L G+ ++ FT G
Sbjct: 120 --GLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT---G 171
Query: 228 TIGYMDPEYMTNAK--LTCASDIYSFGIVALQLLSGQ 262
T+ YM PE + A+DI+S G +++ +G+
Sbjct: 172 TLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 94/196 (47%), Gaps = 10/196 (5%)
Query: 74 LGRGSAGLVYK-GVLPSGQVVAIKHIY---KSNNTDSFSREVEGLSRVRHPNLVCLFGCC 129
LG G+ G+V+K PSG V+A K I+ K + RE++ L P +V +G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 130 VEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRD 189
GE + E G+L Q +L+K + + K+ L YL I+HRD
Sbjct: 74 YSDGEISICMEHMDGGSLDQ-VLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRD 130
Query: 190 IKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIY 249
+K +NIL+ + E KL DFG++ L + F GT YM PE + + SDI+
Sbjct: 131 VKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSVQSDIW 187
Query: 250 SFGIVALQLLSGQKVI 265
S G+ +++ G+ I
Sbjct: 188 SMGLSLVEMAVGRYPI 203
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 16/200 (8%)
Query: 71 RRFLGRGSAGLVY------KGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVC 124
+R LG+GS G V G + +V++ + + + + +S REV+ L ++ HPN++
Sbjct: 54 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 113
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
L+ + G YLV E G L ++ + + +I+R + Y+H
Sbjct: 114 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSGITYMHK---NK 169
Query: 185 IVHRDIKLTNILLTEKLEP---KLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAK 241
IVHRD+K N+LL K + ++ DFGL+ E SK D GT Y+ PE + +
Sbjct: 170 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKIGTAYYIAPEVL-HGT 226
Query: 242 LTCASDIYSFGIVALQLLSG 261
D++S G++ LLSG
Sbjct: 227 YDEKCDVWSTGVILYILLSG 246
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 16/200 (8%)
Query: 71 RRFLGRGSAGLVY------KGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVC 124
+R LG+GS G V G + +V++ + + + + +S REV+ L ++ HPN++
Sbjct: 55 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 114
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
L+ + G YLV E G L ++ + + +I+R + Y+H
Sbjct: 115 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSGITYMHK---NK 170
Query: 185 IVHRDIKLTNILLTEKLEP---KLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAK 241
IVHRD+K N+LL K + ++ DFGL+ E SK D GT Y+ PE + +
Sbjct: 171 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKIGTAYYIAPEVL-HGT 227
Query: 242 LTCASDIYSFGIVALQLLSG 261
D++S G++ LLSG
Sbjct: 228 YDEKCDVWSTGVILYILLSG 247
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 68 DWDR-RFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTD---SFSREVEGLSRVRHPNL 122
DWD + LG G+ G V V + + VA+K + D + +E+ + H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYID 182
V +G EG QYL E+C+ G L + D + + + YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHGI-- 123
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE-SKVFTDVRGTIGYMDPEYMTNAK 241
I HRDIK N+LL E+ K+SDFGLA + ++ + GT+ Y+ PE + +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 242 LTCAS-DIYSFGIVALQLLSGQ 262
D++S GIV +L+G+
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 68 DWDR-RFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTD---SFSREVEGLSRVRHPNL 122
DWD + LG G+ G V V + + VA+K + D + +E+ + H N+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYID 182
V +G EG QYL E+C+ G L + D + + + YLH
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHGI-- 124
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE-SKVFTDVRGTIGYMDPEYMTNAK 241
I HRDIK N+LL E+ K+SDFGLA + ++ + GT+ Y+ PE + +
Sbjct: 125 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 242 LTCAS-DIYSFGIVALQLLSGQ 262
D++S GIV +L+G+
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 89/181 (49%), Gaps = 14/181 (7%)
Query: 89 SGQVVAIKHIYKS---NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQ--YLVYEFCA 143
+G+ VA+K + N+ +E+E L + H N+V G C E G L+ EF
Sbjct: 37 TGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLP 96
Query: 144 AGNLAQHLLRKDSVLTWERRVKILRDCALALRYL--HHYIDGCIVHRDIKLTNILLTEKL 201
+G+L ++L + + + ++++K + YL Y VHRD+ N+L+ +
Sbjct: 97 SGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQY-----VHRDLAARNVLVESEH 151
Query: 202 EPKLSDFGLAKMLGM--EESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLL 259
+ K+ DFGL K + E V D + + PE + +K ASD++SFG+ +LL
Sbjct: 152 QVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 211
Query: 260 S 260
+
Sbjct: 212 T 212
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 94/198 (47%), Gaps = 17/198 (8%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ----VVAIKHIYKSNNTDS----FSREVEGLSRVRHPNLV 123
R +G G G V++G+ S + VAIK K+ +DS F +E + + HP++V
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTC-KNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG 183
L G E +++ E C G L L + L + + AL YL
Sbjct: 75 KLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SK 130
Query: 184 CIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRG--TIGYMDPEYMTNAK 241
VHRDI N+L++ KL DFGL++ ME+S + +G I +M PE + +
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRR 188
Query: 242 LTCASDIYSFGIVALQLL 259
T ASD++ FG+ ++L
Sbjct: 189 FTSASDVWMFGVCMWEIL 206
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 10/161 (6%)
Query: 105 DSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRV 164
+ REV L ++HPN++ L + L+ E A G L L K+S LT E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES-LTEEEAT 117
Query: 165 KILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP----KLSDFGLAKMLGMEESK 220
+ L+ + YLH I H D+K NI+L ++ P K+ DFGLA +
Sbjct: 118 EFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF--GN 172
Query: 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
F ++ GT ++ PE + L +D++S G++ LLSG
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 68 DWDR-RFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTD---SFSREVEGLSRVRHPNL 122
DWD + LG G+ G V V + + VA+K + D + +E+ + H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYID 182
V +G EG QYL E+C+ G L + D + + + YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHGI-- 123
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE-SKVFTDVRGTIGYMDPEYMTNAK 241
I HRDIK N+LL E+ K+SDFGLA + ++ + GT+ Y+ PE + +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 242 LTCAS-DIYSFGIVALQLLSGQ 262
D++S GIV +L+G+
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 68 DWDR-RFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTD---SFSREVEGLSRVRHPNL 122
DWD + LG G+ G V V + + VA+K + D + +E+ + H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYID 182
V +G EG QYL E+C+ G L + D + + + YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHGI-- 123
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE-SKVFTDVRGTIGYMDPEYMTNAK 241
I HRDIK N+LL E+ K+SDFGLA + ++ + GT+ Y+ PE + +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 242 LTCAS-DIYSFGIVALQLLSGQ 262
D++S GIV +L+G+
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 68 DWDR-RFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTD---SFSREVEGLSRVRHPNL 122
DWD + LG G+ G V V + + VA+K + D + +E+ + H N+
Sbjct: 6 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 65
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYID 182
V +G EG QYL E+C+ G L + D + + + YLH
Sbjct: 66 VKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHGI-- 122
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE-SKVFTDVRGTIGYMDPEYMTNAK 241
I HRDIK N+LL E+ K+SDFGLA + ++ + GT+ Y+ PE + +
Sbjct: 123 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 181
Query: 242 LTCAS-DIYSFGIVALQLLSGQ 262
D++S GIV +L+G+
Sbjct: 182 FHAEPVDVWSCGIVLTAMLAGE 203
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 68 DWDR-RFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTD---SFSREVEGLSRVRHPNL 122
DWD + LG G+ G V V + + VA+K + D + +E+ + H N+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYID 182
V +G EG QYL E+C+ G L + D + + + YLH
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHGI-- 124
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE-SKVFTDVRGTIGYMDPEYMTNAK 241
I HRDIK N+LL E+ K+SDFGLA + ++ + GT+ Y+ PE + +
Sbjct: 125 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 242 LTCAS-DIYSFGIVALQLLSGQ 262
D++S GIV +L+G+
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 68 DWDR-RFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTD---SFSREVEGLSRVRHPNL 122
DWD + LG G+ G V V + + VA+K + D + +E+ + H N+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYID 182
V +G EG QYL E+C+ G L + D + + + YLH
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHGI-- 124
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE-SKVFTDVRGTIGYMDPEYMTNAK 241
I HRDIK N+LL E+ K+SDFGLA + ++ + GT+ Y+ PE + +
Sbjct: 125 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 242 LTCAS-DIYSFGIVALQLLSGQ 262
D++S GIV +L+G+
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 94/198 (47%), Gaps = 17/198 (8%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ----VVAIKHIYKSNNTDS----FSREVEGLSRVRHPNLV 123
R +G G G V++G+ S + VAIK K+ +DS F +E + + HP++V
Sbjct: 44 RCIGEGQFGDVHQGIYMSPENPALAVAIKTC-KNCTSDSVREKFLQEALTMRQFDHPHIV 102
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG 183
L G E +++ E C G L L + L + + AL YL
Sbjct: 103 KLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SK 158
Query: 184 CIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRG--TIGYMDPEYMTNAK 241
VHRDI N+L++ KL DFGL++ ME+S + +G I +M PE + +
Sbjct: 159 RFVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRR 216
Query: 242 LTCASDIYSFGIVALQLL 259
T ASD++ FG+ ++L
Sbjct: 217 FTSASDVWMFGVCMWEIL 234
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 68 DWDR-RFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTD---SFSREVEGLSRVRHPNL 122
DWD + LG G+ G V V + + VA+K + D + +E+ + H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYID 182
V +G EG QYL E+C+ G L + D + + + YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHGI-- 123
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE-SKVFTDVRGTIGYMDPEYMTNAK 241
I HRDIK N+LL E+ K+SDFGLA + ++ + GT+ Y+ PE + +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 242 LTCAS-DIYSFGIVALQLLSGQ 262
D++S GIV +L+G+
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 68 DWDR-RFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTD---SFSREVEGLSRVRHPNL 122
DWD + LG G+ G V V + + VA+K + D + +E+ + H N+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYID 182
V +G EG QYL E+C+ G L + D + + + YLH
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHGI-- 124
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE-SKVFTDVRGTIGYMDPEYMTNAK 241
I HRDIK N+LL E+ K+SDFGLA + ++ + GT+ Y+ PE + +
Sbjct: 125 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 242 LTCAS-DIYSFGIVALQLLSGQ 262
D++S GIV +L+G+
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 94/198 (47%), Gaps = 17/198 (8%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ----VVAIKHIYKSNNTDS----FSREVEGLSRVRHPNLV 123
R +G G G V++G+ S + VAIK K+ +DS F +E + + HP++V
Sbjct: 19 RCIGEGQFGDVHQGIYMSPENPALAVAIKTC-KNCTSDSVREKFLQEALTMRQFDHPHIV 77
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG 183
L G E +++ E C G L L + L + + AL YL
Sbjct: 78 KLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SK 133
Query: 184 CIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRG--TIGYMDPEYMTNAK 241
VHRDI N+L++ KL DFGL++ ME+S + +G I +M PE + +
Sbjct: 134 RFVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRR 191
Query: 242 LTCASDIYSFGIVALQLL 259
T ASD++ FG+ ++L
Sbjct: 192 FTSASDVWMFGVCMWEIL 209
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 94/198 (47%), Gaps = 17/198 (8%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ----VVAIKHIYKSNNTDS----FSREVEGLSRVRHPNLV 123
R +G G G V++G+ S + VAIK K+ +DS F +E + + HP++V
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPALAVAIKTC-KNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG 183
L G E +++ E C G L L + L + + AL YL
Sbjct: 75 KLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SK 130
Query: 184 CIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRG--TIGYMDPEYMTNAK 241
VHRDI N+L++ KL DFGL++ ME+S + +G I +M PE + +
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRR 188
Query: 242 LTCASDIYSFGIVALQLL 259
T ASD++ FG+ ++L
Sbjct: 189 FTSASDVWMFGVCMWEIL 206
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 68 DWDR-RFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTD---SFSREVEGLSRVRHPNL 122
DWD + LG G+ G V V + + VA+K + D + +E+ + H N+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYID 182
V +G EG QYL E+C+ G L + D + + + YLH
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHGI-- 124
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE-SKVFTDVRGTIGYMDPEYMTNAK 241
I HRDIK N+LL E+ K+SDFGLA + ++ + GT+ Y+ PE + +
Sbjct: 125 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 242 LTCAS-DIYSFGIVALQLLSGQ 262
D++S GIV +L+G+
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 113/240 (47%), Gaps = 25/240 (10%)
Query: 74 LGRGSAG---LVYKGVLPSGQVVAIKHI-----YKSNNTDSFSREVEGLSRVRHPNLVCL 125
LG GS G L Y +GQ VA+K I KS+ RE+ L +RHP+++ L
Sbjct: 21 LGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 78
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+ E +V E+ A L +++++D + E R + + A+ Y H + I
Sbjct: 79 YDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCHRH---KI 133
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
VHRD+K N+LL E L K++DFGL+ + M + G+ Y PE ++ KL
Sbjct: 134 VHRDLKPENLLLDEHLNVKIADFGLSNI--MTDGNFLKTSCGSPNYAAPEVIS-GKLYAG 190
Query: 246 S--DIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINR 303
D++S G++ +L + L FD + + +++S G + F P G I R
Sbjct: 191 PEVDVWSCGVILYVMLCRR----LPFD-DESIPVLFKNISNGVYTLPKFLSPGAAGLIKR 245
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 68 DWDR-RFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTD---SFSREVEGLSRVRHPNL 122
DWD + LG G+ G V V + + VA+K + D + +E+ + H N+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYID 182
V +G EG QYL E+C+ G L + D + + + YLH
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHGI-- 124
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE-SKVFTDVRGTIGYMDPEYMTNAK 241
I HRDIK N+LL E+ K+SDFGLA + ++ + GT+ Y+ PE + +
Sbjct: 125 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 242 LTCAS-DIYSFGIVALQLLSGQ 262
D++S GIV +L+G+
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 94/198 (47%), Gaps = 17/198 (8%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ----VVAIKHIYKSNNTDS----FSREVEGLSRVRHPNLV 123
R +G G G V++G+ S + VAIK K+ +DS F +E + + HP++V
Sbjct: 13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTC-KNCTSDSVREKFLQEALTMRQFDHPHIV 71
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG 183
L G E +++ E C G L L + L + + AL YL
Sbjct: 72 KLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SK 127
Query: 184 CIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRG--TIGYMDPEYMTNAK 241
VHRDI N+L++ KL DFGL++ ME+S + +G I +M PE + +
Sbjct: 128 RFVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRR 185
Query: 242 LTCASDIYSFGIVALQLL 259
T ASD++ FG+ ++L
Sbjct: 186 FTSASDVWMFGVCMWEIL 203
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 113/240 (47%), Gaps = 25/240 (10%)
Query: 74 LGRGSAG---LVYKGVLPSGQVVAIKHI-----YKSNNTDSFSREVEGLSRVRHPNLVCL 125
LG GS G L Y +GQ VA+K I KS+ RE+ L +RHP+++ L
Sbjct: 12 LGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 69
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+ E +V E+ A L +++++D + E R + + A+ Y H + I
Sbjct: 70 YDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCHRH---KI 124
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
VHRD+K N+LL E L K++DFGL+ + M + G+ Y PE ++ KL
Sbjct: 125 VHRDLKPENLLLDEHLNVKIADFGLSNI--MTDGNFLKTSCGSPNYAAPEVIS-GKLYAG 181
Query: 246 S--DIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINR 303
D++S G++ +L + L FD + + +++S G + F P G I R
Sbjct: 182 PEVDVWSCGVILYVMLCRR----LPFDD-ESIPVLFKNISNGVYTLPKFLSPGAAGLIKR 236
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 113/240 (47%), Gaps = 25/240 (10%)
Query: 74 LGRGSAG---LVYKGVLPSGQVVAIKHI-----YKSNNTDSFSREVEGLSRVRHPNLVCL 125
LG GS G L Y +GQ VA+K I KS+ RE+ L +RHP+++ L
Sbjct: 22 LGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 79
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+ E +V E+ A L +++++D + E R + + A+ Y H + I
Sbjct: 80 YDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCHRH---KI 134
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
VHRD+K N+LL E L K++DFGL+ + M + G+ Y PE ++ KL
Sbjct: 135 VHRDLKPENLLLDEHLNVKIADFGLSNI--MTDGNFLKTSCGSPNYAAPEVIS-GKLYAG 191
Query: 246 S--DIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINR 303
D++S G++ +L + L FD + + +++S G + F P G I R
Sbjct: 192 PEVDVWSCGVILYVMLCRR----LPFD-DESIPVLFKNISNGVYTLPKFLSPGAAGLIKR 246
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 68 DWDR-RFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTD---SFSREVEGLSRVRHPNL 122
DWD + LG G+ G V V + + VA+K + D + +E+ + H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYID 182
V +G EG QYL E+C+ G L + D + + + YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHGI-- 123
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE-SKVFTDVRGTIGYMDPEYMTNAK 241
I HRDIK N+LL E+ K+SDFGLA + ++ + GT+ Y+ PE + +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 242 LTCAS-DIYSFGIVALQLLSGQ 262
D++S GIV +L+G+
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 97/196 (49%), Gaps = 15/196 (7%)
Query: 74 LGRGSAGLVYK-GVLPSGQVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLVCLFGC 128
LG+GS G V K + Q A+K I K++ +T + REVE L ++ HPN++ LF
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHR 188
+ Y+V E G L ++++ + +I++ + Y+H + IVHR
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKR-FSEHDAARIIKQVFSGITYMHKH---NIVHR 145
Query: 189 DIKLTNILLTEK---LEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
D+K NILL K + K+ DFGL+ +++ D GT Y+ PE +
Sbjct: 146 DLKPENILLESKEKDCDIKIIDFGLSTCF--QQNTKMKDRIGTAYYIAPEVL-RGTYDEK 202
Query: 246 SDIYSFGIVALQLLSG 261
D++S G++ LLSG
Sbjct: 203 CDVWSAGVILYILLSG 218
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 118/270 (43%), Gaps = 20/270 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG G G V+ G + VA+K + + +F E + ++H LV L+ +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKE 79
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDS-VLTWERRVKILRDCALALRYLHHYIDGCIVHRDIK 191
Y++ EF A G+L L + + + + A + Y+ +HRD++
Sbjct: 80 EPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDLR 136
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
N+L++E L K++DFGLA+++ E + I + PE + T S+++SF
Sbjct: 137 AANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSF 196
Query: 252 GIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILK 311
GI+ ++++ K+ D ++ ++ M PR+ N D +
Sbjct: 197 GILLYEIVTYGKIPYPGRTNADVMSALSQGYRM----------PRME---NCPD--ELYD 241
Query: 312 IAVLCVAKSSKGRPTIDVVYEEIDKAWKNT 341
I +C + ++ RPT D + +D + T
Sbjct: 242 IMKMCWKEKAEERPTFDYLQSVLDDFYTAT 271
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 94/198 (47%), Gaps = 17/198 (8%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ----VVAIKHIYKSNNTDS----FSREVEGLSRVRHPNLV 123
R +G G G V++G+ S + VAIK K+ +DS F +E + + HP++V
Sbjct: 21 RCIGEGQFGDVHQGIYMSPENPALAVAIKTC-KNCTSDSVREKFLQEALTMRQFDHPHIV 79
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG 183
L G E +++ E C G L L + L + + AL YL
Sbjct: 80 KLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SK 135
Query: 184 CIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRG--TIGYMDPEYMTNAK 241
VHRDI N+L++ KL DFGL++ ME+S + +G I +M PE + +
Sbjct: 136 RFVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRR 193
Query: 242 LTCASDIYSFGIVALQLL 259
T ASD++ FG+ ++L
Sbjct: 194 FTSASDVWMFGVCMWEIL 211
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 94/198 (47%), Gaps = 17/198 (8%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ----VVAIKHIYKSNNTDS----FSREVEGLSRVRHPNLV 123
R +G G G V++G+ S + VAIK K+ +DS F +E + + HP++V
Sbjct: 18 RCIGEGQFGDVHQGIYMSPENPALAVAIKTC-KNCTSDSVREKFLQEALTMRQFDHPHIV 76
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG 183
L G E +++ E C G L L + L + + AL YL
Sbjct: 77 KLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SK 132
Query: 184 CIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRG--TIGYMDPEYMTNAK 241
VHRDI N+L++ KL DFGL++ ME+S + +G I +M PE + +
Sbjct: 133 RFVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRR 190
Query: 242 LTCASDIYSFGIVALQLL 259
T ASD++ FG+ ++L
Sbjct: 191 FTSASDVWMFGVCMWEIL 208
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 94/198 (47%), Gaps = 17/198 (8%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ----VVAIKHIYKSNNTDS----FSREVEGLSRVRHPNLV 123
R +G G G V++G+ S + VAIK K+ +DS F +E + + HP++V
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTC-KNCTSDSVREKFLQEALTMRQFDHPHIV 454
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG 183
L G E +++ E C G L L + L + + AL YL
Sbjct: 455 KLIGVITEN-PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SK 510
Query: 184 CIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRG--TIGYMDPEYMTNAK 241
VHRDI N+L++ KL DFGL++ ME+S + +G I +M PE + +
Sbjct: 511 RFVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRR 568
Query: 242 LTCASDIYSFGIVALQLL 259
T ASD++ FG+ ++L
Sbjct: 569 FTSASDVWMFGVCMWEIL 586
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 68 DWDR-RFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTD---SFSREVEGLSRVRHPNL 122
DWD + LG G+ G V V + + VA+K + D + +E+ + H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYID 182
V +G EG QYL E+C+ G L + D + + + YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHGI-- 123
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE-SKVFTDVRGTIGYMDPEYMTNAK 241
I HRDIK N+LL E+ K+SDFGLA + ++ + GT+ Y+ PE + +
Sbjct: 124 -GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 242 LTCAS-DIYSFGIVALQLLSGQ 262
D++S GIV +L+G+
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 113/240 (47%), Gaps = 25/240 (10%)
Query: 74 LGRGSAG---LVYKGVLPSGQVVAIKHI-----YKSNNTDSFSREVEGLSRVRHPNLVCL 125
LG GS G L Y +GQ VA+K I KS+ RE+ L +RHP+++ L
Sbjct: 16 LGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 73
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+ E +V E+ A L +++++D + E R + + A+ Y H + I
Sbjct: 74 YDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCHRH---KI 128
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
VHRD+K N+LL E L K++DFGL+ + M + G+ Y PE ++ KL
Sbjct: 129 VHRDLKPENLLLDEHLNVKIADFGLSNI--MTDGNFLKTSCGSPNYAAPEVIS-GKLYAG 185
Query: 246 S--DIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINR 303
D++S G++ +L + L FD + + +++S G + F P G I R
Sbjct: 186 PEVDVWSCGVILYVMLCRR----LPFD-DESIPVLFKNISNGVYTLPKFLSPGAAGLIKR 240
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 91/178 (51%), Gaps = 10/178 (5%)
Query: 89 SGQVVAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+G++VAIK + K+ R E+E L +RH ++ L+ + ++V E+C G
Sbjct: 34 TGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGG 93
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
L +++ +D + E RV + R A+ Y+H HRD+K N+L E + KL
Sbjct: 94 ELFDYIISQDRLSEEETRV-VFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKL 149
Query: 206 SDFGL-AKMLGMEESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSG 261
DFGL AK G ++ + T G++ Y PE + + L +D++S GI+ L+ G
Sbjct: 150 IDFGLCAKPKGNKDYHLQT-CCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 99/223 (44%), Gaps = 17/223 (7%)
Query: 73 FLGRGSAGLVY-------KGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCL 125
FLG+G + K V +G++V + K + + S E+ + H ++V
Sbjct: 46 FLGKGGFAKCFEISDADTKEVF-AGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 104
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
G + ++V E C +L + R+ ++ E R LR L +YLH +
Sbjct: 105 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY-YLRQIVLGCQYLHR---NRV 160
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGM--EESKVFTDVRGTIGYMDPEYMTNAKLT 243
+HRD+KL N+ L E LE K+ DFGLA + E KV GT Y+ PE ++ +
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC---GTPNYIAPEVLSKKGHS 217
Query: 244 CASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGK 286
D++S G + LL G+ E L K + S+ K
Sbjct: 218 FEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK 260
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 80/156 (51%), Gaps = 13/156 (8%)
Query: 118 RHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRK-----------DSVLTWERRVKI 166
+H N++ L G C + G Y++ E+ + GNL ++L + + V + K
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 167 LRDCALAL-RYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKML-GMEESKVFTD 224
L C L R + + +HRD+ N+L+TE K++DFGLA+ + ++ K T+
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
R + +M PE + + T SD++SFG++ ++ +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 99/223 (44%), Gaps = 17/223 (7%)
Query: 73 FLGRGSAGLVY-------KGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCL 125
FLG+G + K V +G++V + K + + S E+ + H ++V
Sbjct: 48 FLGKGGFAKCFEISDADTKEVF-AGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 106
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
G + ++V E C +L + R+ ++ E R LR L +YLH +
Sbjct: 107 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY-YLRQIVLGCQYLHR---NRV 162
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGM--EESKVFTDVRGTIGYMDPEYMTNAKLT 243
+HRD+KL N+ L E LE K+ DFGLA + E KV GT Y+ PE ++ +
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC---GTPNYIAPEVLSKKGHS 219
Query: 244 CASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGK 286
D++S G + LL G+ E L K + S+ K
Sbjct: 220 FEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK 262
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 80/156 (51%), Gaps = 13/156 (8%)
Query: 118 RHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRK-----------DSVLTWERRVKI 166
+H N++ L G C + G Y++ E+ + GNL ++L + + V + K
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 167 LRDCALAL-RYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKML-GMEESKVFTD 224
L C L R + + +HRD+ N+L+TE K++DFGLA+ + ++ K T+
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
R + +M PE + + T SD++SFG++ ++ +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 94/198 (47%), Gaps = 17/198 (8%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ----VVAIKHIYKSNNTDS----FSREVEGLSRVRHPNLV 123
R +G G G V++G+ S + VAIK K+ +DS F +E + + HP++V
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTC-KNCTSDSVREKFLQEALTMRQFDHPHIV 454
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG 183
L G E +++ E C G L L + L + + AL YL
Sbjct: 455 KLIGVITEN-PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SK 510
Query: 184 CIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRG--TIGYMDPEYMTNAK 241
VHRDI N+L++ KL DFGL++ ME+S + +G I +M PE + +
Sbjct: 511 RFVHRDIAARNVLVSATDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRR 568
Query: 242 LTCASDIYSFGIVALQLL 259
T ASD++ FG+ ++L
Sbjct: 569 FTSASDVWMFGVCMWEIL 586
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 94/198 (47%), Gaps = 17/198 (8%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ----VVAIKHIYKSNNTDS----FSREVEGLSRVRHPNLV 123
R +G G G V++G+ S + VAIK K+ +DS F +E + + HP++V
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTC-KNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG 183
L G E +++ E C G L L + L + + AL YL
Sbjct: 75 KLIGVITEN-PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SK 130
Query: 184 CIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRG--TIGYMDPEYMTNAK 241
VHRDI N+L++ KL DFGL++ ME+S + +G I +M PE + +
Sbjct: 131 RFVHRDIAARNVLVSATDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRR 188
Query: 242 LTCASDIYSFGIVALQLL 259
T ASD++ FG+ ++L
Sbjct: 189 FTSASDVWMFGVCMWEIL 206
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 16/207 (7%)
Query: 71 RRFLGRGSAGLVYKGV-LPSGQVVAIKHIY-----KSNNTDSFSREVEGLSRVRHPNLVC 124
R LG GS G V + Q VA+K I KS+ RE+ L +RHP+++
Sbjct: 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIK 73
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
L+ + +V E+ A G L +++ K + E R + + A+ Y H +
Sbjct: 74 LYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGR-RFFQQIICAIEYCHRH---K 128
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTC 244
IVHRD+K N+LL + L K++DFGL+ + M + G+ Y PE + N KL
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSNI--MTDGNFLKTSCGSPNYAAPE-VINGKLYA 185
Query: 245 AS--DIYSFGIVALQLLSGQKVIELDF 269
D++S GIV +L G+ + +F
Sbjct: 186 GPEVDVWSCGIVLYVMLVGRLPFDDEF 212
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 12/207 (5%)
Query: 71 RRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRH-PNLVCLFGCC 129
R+ G + L VL +V K+ T+ E + L +R P LV L
Sbjct: 74 RKISGHDTGKLYAMKVLKKATIVQ-----KAKTTEHTRTERQVLEHIRQSPFLVTLHYAF 128
Query: 130 VEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRD 189
+ +L+ ++ G L HL +++ E ++ + + LAL +LH I++RD
Sbjct: 129 QTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYV-GEIVLALEHLHKL---GIIYRD 184
Query: 190 IKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMT--NAKLTCASD 247
IKL NILL L+DFGL+K +E++ D GTI YM P+ + ++ A D
Sbjct: 185 IKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVD 244
Query: 248 IYSFGIVALQLLSGQKVIELDFDARDQ 274
+S G++ +LL+G +D + Q
Sbjct: 245 WWSLGVLMYELLTGASPFTVDGEKNSQ 271
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIKHI--YKSNNTDSFSREVEGLSRVRHPNLVCLFGCCV 130
LG+G G K +G+V+ +K + + +F +EV+ + + HPN++ G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 131 EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDI 190
+ + E+ G L + DS W +RV +D A + YLH I+HRD+
Sbjct: 78 KDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDL 134
Query: 191 KLTNILLTEKLEPKLSDFGLAKMLGMEES--------------KVFTDVRGTIGYMDPEY 236
N L+ E ++DFGLA+++ E++ K +T V G +M PE
Sbjct: 135 NSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYT-VVGNPYWMAPEM 193
Query: 237 MTNAKLTCASDIYSFGIVALQLLS 260
+ D++SFGIV +++
Sbjct: 194 INGRSYDEKVDVFSFGIVLCEIIG 217
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 13/221 (5%)
Query: 73 FLGRGSAGLVY-------KGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCL 125
FLG+G + K V +G++V + K + + S E+ + H ++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVF-AGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 82
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
G + ++V E C +L + R+ ++ E R LR L +YLH +
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY-YLRQIVLGCQYLHR---NRV 138
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
+HRD+KL N+ L E LE K+ DFGLA + + + T + GT Y+ PE ++ +
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHSFE 197
Query: 246 SDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGK 286
D++S G + LL G+ E L K + S+ K
Sbjct: 198 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK 238
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 13/221 (5%)
Query: 73 FLGRGSAGLVY-------KGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCL 125
FLG+G + K V +G++V + K + + S E+ + H ++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVF-AGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 82
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
G + ++V E C +L + R+ ++ E R LR L +YLH +
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY-YLRQIVLGCQYLHR---NRV 138
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
+HRD+KL N+ L E LE K+ DFGLA + + + T + GT Y+ PE ++ +
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHSFE 197
Query: 246 SDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGK 286
D++S G + LL G+ E L K + S+ K
Sbjct: 198 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK 238
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 99/223 (44%), Gaps = 17/223 (7%)
Query: 73 FLGRGSAGLVY-------KGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCL 125
FLG+G + K V +G++V + K + + S E+ + H ++V
Sbjct: 22 FLGKGGFAKCFEISDADTKEVF-AGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 80
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
G + ++V E C +L + R+ ++ E R LR L +YLH +
Sbjct: 81 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY-YLRQIVLGCQYLHR---NRV 136
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGM--EESKVFTDVRGTIGYMDPEYMTNAKLT 243
+HRD+KL N+ L E LE K+ DFGLA + E KV GT Y+ PE ++ +
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC---GTPNYIAPEVLSKKGHS 193
Query: 244 CASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGK 286
D++S G + LL G+ E L K + S+ K
Sbjct: 194 FEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK 236
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 80/156 (51%), Gaps = 13/156 (8%)
Query: 118 RHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRK-----------DSVLTWERRVKI 166
+H N++ L G C + G Y++ E+ + GNL ++L + + V + K
Sbjct: 99 KHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 167 LRDCALAL-RYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKML-GMEESKVFTD 224
L C L R + + +HRD+ N+L+TE K++DFGLA+ + ++ K T+
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
R + +M PE + + T SD++SFG++ ++ +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 12/194 (6%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTDSFS--REVEGLSRVRHPNLVCLFGCCV 130
LG G+ G+V++ V +G+V K I D ++ E+ ++++ HP L+ L
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 131 EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDI 190
+ E L+ EF + G L + +D ++ + +R L+++H + IVH DI
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDI 175
Query: 191 KLTNILLTEKLEP--KLSDFGLAKMLGMEE-SKVFTDVRGTIGYMDPEYMTNAKLTCASD 247
K NI+ K K+ DFGLA L +E KV T T + PE + + +D
Sbjct: 176 KPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAEFAAPEIVDREPVGFYTD 232
Query: 248 IYSFGIVALQLLSG 261
+++ G++ LLSG
Sbjct: 233 MWAIGVLGYVLLSG 246
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 88/190 (46%), Gaps = 15/190 (7%)
Query: 89 SGQVVAIKHIYKSN-NTDSFS---REVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAA 144
+G+ VA++ I K+ N+ S REV + + HPN+V LF YLV E+ +
Sbjct: 38 TGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPK 204
G + +L+ + E R K R A++Y H IVHRD+K N+LL + K
Sbjct: 98 GEVFDYLVAHGRMKEKEARAK-FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIK 153
Query: 205 LSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCAS-DIYSFGIVALQLLSGQK 263
++DFG + + G+ Y PE K D++S G++ L+SG
Sbjct: 154 IADFGFSNEFTF--GNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS- 210
Query: 264 VIELDFDARD 273
L FD ++
Sbjct: 211 ---LPFDGQN 217
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 87/190 (45%), Gaps = 15/190 (7%)
Query: 89 SGQVVAIKHIYKSN-NTDSFS---REVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAA 144
+G+ VA+K I K+ N+ S REV + + HPN+V LF YLV E+ +
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPK 204
G + +L+ + E R K R A++Y H IVHRD+K N+LL + K
Sbjct: 98 GEVFDYLVAHGRMKEKEARAK-FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIK 153
Query: 205 LSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCAS-DIYSFGIVALQLLSGQK 263
++DFG + G+ Y PE K D++S G++ L+SG
Sbjct: 154 IADFGFSNEFTF--GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS- 210
Query: 264 VIELDFDARD 273
L FD ++
Sbjct: 211 ---LPFDGQN 217
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 87/190 (45%), Gaps = 15/190 (7%)
Query: 89 SGQVVAIKHIYKSN-NTDSFS---REVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAA 144
+G+ VA+K I K+ N+ S REV + + HPN+V LF YLV E+ +
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPK 204
G + +L+ + E R K R A++Y H IVHRD+K N+LL + K
Sbjct: 98 GEVFDYLVAHGRMKEKEARAK-FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIK 153
Query: 205 LSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCAS-DIYSFGIVALQLLSGQK 263
++DFG + G+ Y PE K D++S G++ L+SG
Sbjct: 154 IADFGFSNEFTF--GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS- 210
Query: 264 VIELDFDARD 273
L FD ++
Sbjct: 211 ---LPFDGQN 217
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 13/221 (5%)
Query: 73 FLGRGSAGLVY-------KGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCL 125
FLG+G + K V +G++V + K + + S E+ + H ++V
Sbjct: 28 FLGKGGFAKCFEISDADTKEVF-AGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 86
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
G + ++V E C +L + R+ ++ E R LR L +YLH +
Sbjct: 87 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY-YLRQIVLGCQYLHR---NRV 142
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
+HRD+KL N+ L E LE K+ DFGLA + + + T + GT Y+ PE ++ +
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHSFE 201
Query: 246 SDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGK 286
D++S G + LL G+ E L K + S+ K
Sbjct: 202 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK 242
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 97/196 (49%), Gaps = 15/196 (7%)
Query: 74 LGRGSAGLVYK-GVLPSGQVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLVCLFGC 128
LG+GS G V K + Q A+K I K++ +T + REVE L ++ HPN++ LF
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHR 188
+ Y+V E G L ++++ + +I++ + Y+H + IVHR
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKR-FSEHDAARIIKQVFSGITYMHKH---NIVHR 145
Query: 189 DIKLTNILLTEK---LEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
D+K NILL K + K+ DFGL+ +++ D GT Y+ PE +
Sbjct: 146 DLKPENILLESKEKDCDIKIIDFGLSTCF--QQNTKMKDRIGTAYYIAPEVL-RGTYDEK 202
Query: 246 SDIYSFGIVALQLLSG 261
D++S G++ LLSG
Sbjct: 203 CDVWSAGVILYILLSG 218
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 97/198 (48%), Gaps = 13/198 (6%)
Query: 72 RFLGRGSAGLVYKGV-LPSGQVVAIK---HIYKSNNTDSFSREVEG----LSRVRHPNLV 123
+ LG G+ G VYKG+ +P G+ V I + + N + ++E+ ++ V P +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG 183
L G C+ Q LV + G L H+ L + + A + YL D
Sbjct: 83 RLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLE---DV 138
Query: 184 CIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAKL 242
+VHRD+ N+L+ K++DFGLA++L ++E++ D + I +M E + +
Sbjct: 139 RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRF 198
Query: 243 TCASDIYSFGIVALQLLS 260
T SD++S+G+ +L++
Sbjct: 199 THQSDVWSYGVTVWELMT 216
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 97/196 (49%), Gaps = 15/196 (7%)
Query: 74 LGRGSAGLVYK-GVLPSGQVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLVCLFGC 128
LG+GS G V K + Q A+K I K++ +T + REVE L ++ HPN++ LF
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHR 188
+ Y+V E G L ++++ + +I++ + Y+H + IVHR
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKR-FSEHDAARIIKQVFSGITYMHKH---NIVHR 145
Query: 189 DIKLTNILLTEK---LEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
D+K NILL K + K+ DFGL+ +++ D GT Y+ PE +
Sbjct: 146 DLKPENILLESKEKDCDIKIIDFGLSTCF--QQNTKMKDRIGTAYYIAPEVL-RGTYDEK 202
Query: 246 SDIYSFGIVALQLLSG 261
D++S G++ LLSG
Sbjct: 203 CDVWSAGVILYILLSG 218
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 92/186 (49%), Gaps = 17/186 (9%)
Query: 92 VVAIKHIYKSNNTDSFS---REVEGLSRV-RHPNLVCLFGCCVEGGEQYLVYEFCAAGNL 147
VA+K + + S E+E + + +H N++ L G C + G Y++ E+ + GNL
Sbjct: 69 TVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 148 AQHLLRK-----------DSVLTWERRVKILRDCALAL-RYLHHYIDGCIVHRDIKLTNI 195
++L + + V + K L C L R + + +HRD+ N+
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 188
Query: 196 LLTEKLEPKLSDFGLAKML-GMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIV 254
L+TE K++DFGLA+ + ++ K T+ R + +M PE + + T SD++SFG++
Sbjct: 189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
Query: 255 ALQLLS 260
++ +
Sbjct: 249 MWEIFT 254
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 96/204 (47%), Gaps = 22/204 (10%)
Query: 71 RRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTD-------SFSREVEGLSRVRHPNLV 123
+R LG G+ G V+ L + ++ + K+ N D E+E L + HPN++
Sbjct: 27 KRKLGSGAFGDVH---LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDS---VLTWERRVKILRDCALALRYLHHY 180
+F + Y+V E C G L + ++ + L+ ++++ AL Y H
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH-- 141
Query: 181 IDGCIVHRDIKLTNILL--TEKLEP-KLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYM 237
+VH+D+K NIL T P K+ DFGLA++ +E T+ GT YM PE
Sbjct: 142 -SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS--TNAAGTALYMAPEVF 198
Query: 238 TNAKLTCASDIYSFGIVALQLLSG 261
+T DI+S G+V LL+G
Sbjct: 199 KR-DVTFKCDIWSAGVVMYFLLTG 221
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 100/199 (50%), Gaps = 15/199 (7%)
Query: 72 RFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTDS-------FSREVEGLSRVRHPNLV 123
+ LG G+ G VYKG+ +P G+ V I K N + F E ++ + HP+LV
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLL-RKDSVLTWERRVKILRDCALALRYLHHYID 182
L G C+ Q LV + G L +++ KD++ + +L C + + + +
Sbjct: 81 RLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGS----QLLLNWCVQIAKGMMYLEE 135
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAK 241
+VHRD+ N+L+ K++DFGLA++L +E + D + I +M E + K
Sbjct: 136 RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRK 195
Query: 242 LTCASDIYSFGIVALQLLS 260
T SD++S+G+ +L++
Sbjct: 196 FTHQSDVWSYGVTIWELMT 214
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 105 DSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRV 164
+ REV L +V HPN++ L + L+ E + G L L +K+S L+ E
Sbjct: 60 EEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEAT 118
Query: 165 KILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP----KLSDFGLAKMLGMEESK 220
++ + YLH I H D+K NI+L +K P KL DFGLA +E+
Sbjct: 119 SFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGV 173
Query: 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
F ++ GT ++ PE + L +D++S G++ LLSG
Sbjct: 174 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 103/199 (51%), Gaps = 15/199 (7%)
Query: 72 RFLGRGSAGLVYKGV-LPSGQ----VVAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV 123
+ LG G+ G VYKG+ +P G+ VAIK + ++ + + E ++ V +P++
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLL-RKDSVLTWERRVKILRDCALALRYLHHYID 182
L G C+ Q L+ + G L ++ KD++ + +L C + +++ D
Sbjct: 82 RLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGS----QYLLNWCVQIAKGMNYLED 136
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAK 241
+VHRD+ N+L+ K++DFGLAK+LG EE + + + I +M E + +
Sbjct: 137 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 196
Query: 242 LTCASDIYSFGIVALQLLS 260
T SD++S+G+ +L++
Sbjct: 197 YTHQSDVWSYGVTVWELMT 215
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 103/199 (51%), Gaps = 15/199 (7%)
Query: 72 RFLGRGSAGLVYKGV-LPSGQ----VVAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV 123
+ LG G+ G VYKG+ +P G+ VAIK + ++ + + E ++ V +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLL-RKDSVLTWERRVKILRDCALALRYLHHYID 182
L G C+ Q L+ + G L ++ KD++ + +L C + +++ D
Sbjct: 81 RLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGS----QYLLNWCVQIAKGMNYLED 135
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAK 241
+VHRD+ N+L+ K++DFGLAK+LG EE + + + I +M E + +
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 242 LTCASDIYSFGIVALQLLS 260
T SD++S+G+ +L++
Sbjct: 196 YTHQSDVWSYGVTVWELMT 214
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 80/156 (51%), Gaps = 13/156 (8%)
Query: 118 RHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRK-----------DSVLTWERRVKI 166
+H N++ L G C + G Y++ E+ + GNL ++L + + V + K
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 167 LRDCALAL-RYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKML-GMEESKVFTD 224
L C L R + + +HRD+ N+L+TE K++DFGLA+ + ++ K T+
Sbjct: 205 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 264
Query: 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
R + +M PE + + T SD++SFG++ ++ +
Sbjct: 265 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 27/217 (12%)
Query: 68 DW-DRRF---LGRGSAGLVYK------GVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRV 117
DW D +F +G G+ G V K G+ + +K ++ F+ E+E L ++
Sbjct: 13 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKL 72
Query: 118 -RHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALAL-- 174
HPN++ L G C G YL E+ GNL LRK VL + I A L
Sbjct: 73 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD-FLRKSRVLETDPAFAIANSTASTLSS 131
Query: 175 -RYLHHYIDGC----------IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT 223
+ LH D +HRD+ NIL+ E K++DFGL++ G E T
Sbjct: 132 QQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR--GQEVYVKKT 189
Query: 224 DVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
R + +M E + + T SD++S+G++ +++S
Sbjct: 190 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 100/199 (50%), Gaps = 15/199 (7%)
Query: 72 RFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTDS-------FSREVEGLSRVRHPNLV 123
+ LG G+ G VYKG+ +P G+ V I K N + F E ++ + HP+LV
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLL-RKDSVLTWERRVKILRDCALALRYLHHYID 182
L G C+ Q LV + G L +++ KD++ + +L C + + + +
Sbjct: 104 RLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGS----QLLLNWCVQIAKGMMYLEE 158
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAK 241
+VHRD+ N+L+ K++DFGLA++L +E + D + I +M E + K
Sbjct: 159 RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRK 218
Query: 242 LTCASDIYSFGIVALQLLS 260
T SD++S+G+ +L++
Sbjct: 219 FTHQSDVWSYGVTIWELMT 237
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 27/217 (12%)
Query: 68 DW-DRRF---LGRGSAGLVYK------GVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRV 117
DW D +F +G G+ G V K G+ + +K ++ F+ E+E L ++
Sbjct: 23 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKL 82
Query: 118 -RHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALAL-- 174
HPN++ L G C G YL E+ GNL LRK VL + I A L
Sbjct: 83 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD-FLRKSRVLETDPAFAIANSTASTLSS 141
Query: 175 -RYLHHYIDGC----------IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT 223
+ LH D +HRD+ NIL+ E K++DFGL++ G E T
Sbjct: 142 QQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR--GQEVYVKKT 199
Query: 224 DVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
R + +M E + + T SD++S+G++ +++S
Sbjct: 200 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 80/156 (51%), Gaps = 13/156 (8%)
Query: 118 RHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRK-----------DSVLTWERRVKI 166
+H N++ L G C + G Y++ E+ + GNL ++L + + V + K
Sbjct: 99 KHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 167 LRDCALAL-RYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKML-GMEESKVFTD 224
L C L R + + +HRD+ N+L+TE K++DFGLA+ + ++ K T+
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
R + +M PE + + T SD++SFG++ ++ +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 80/156 (51%), Gaps = 13/156 (8%)
Query: 118 RHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRK-----------DSVLTWERRVKI 166
+H N++ L G C + G Y++ E+ + GNL ++L + + V + K
Sbjct: 91 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 167 LRDCALAL-RYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKML-GMEESKVFTD 224
L C L R + + +HRD+ N+L+TE K++DFGLA+ + ++ K T+
Sbjct: 151 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 210
Query: 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
R + +M PE + + T SD++SFG++ ++ +
Sbjct: 211 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 71 RRFLGRGSAGLVY------KGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVC 124
+R LG+GS G V G + +V++ + + + + +S REV+ L ++ HPN+
Sbjct: 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXK 90
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
L+ + G YLV E G L ++ + + +I+R + Y H
Sbjct: 91 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSGITYXHK---NK 146
Query: 185 IVHRDIKLTNILLTEKLEP---KLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAK 241
IVHRD+K N+LL K + ++ DFGL+ E SK D GT Y+ PE + +
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKXKDKIGTAYYIAPEVL-HGT 203
Query: 242 LTCASDIYSFGIVALQLLSG 261
D++S G++ LLSG
Sbjct: 204 YDEKCDVWSTGVILYILLSG 223
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 80/156 (51%), Gaps = 13/156 (8%)
Query: 118 RHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRK-----------DSVLTWERRVKI 166
+H N++ L G C + G Y++ E+ + GNL ++L + + V + K
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 167 LRDCALAL-RYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKML-GMEESKVFTD 224
L C L R + + +HRD+ N+L+TE K++DFGLA+ + ++ K T+
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTN 218
Query: 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
R + +M PE + + T SD++SFG++ ++ +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 80/156 (51%), Gaps = 13/156 (8%)
Query: 118 RHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRK-----------DSVLTWERRVKI 166
+H N++ L G C + G Y++ E+ + GNL ++L + + V + K
Sbjct: 86 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 167 LRDCALAL-RYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKML-GMEESKVFTD 224
L C L R + + +HRD+ N+L+TE K++DFGLA+ + ++ K T+
Sbjct: 146 LVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 205
Query: 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
R + +M PE + + T SD++SFG++ ++ +
Sbjct: 206 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 71 RRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKS-----NNTDSFSREVEGLSRV-RHPNLV 123
+ LG+GS G V+ + Q AIK + K ++ + E LS HP L
Sbjct: 22 HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLT 81
Query: 124 CLFGCCVEGGEQ-YLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYID 182
+F C + E + V E+ G+L H+ + R + L L++LH
Sbjct: 82 HMF-CTFQTKENLFFVMEYLNGGDLMYHI-QSCHKFDLSRATFYAAEIILGLQFLH---S 136
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAK--MLGMEESKVFTDVRGTIGYMDPEYMTNA 240
IV+RD+KL NILL + K++DFG+ K MLG ++ F GT Y+ PE +
Sbjct: 137 KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFC---GTPDYIAPEILLGQ 193
Query: 241 KLTCASDIYSFGIVALQLLSGQ 262
K + D +SFG++ ++L GQ
Sbjct: 194 KYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 93/198 (46%), Gaps = 17/198 (8%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ----VVAIKHIYKSNNTDS----FSREVEGLSRVRHPNLV 123
R +G G G V++G+ S + VAIK K+ +DS F +E + + HP++V
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTC-KNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG 183
L G E +++ E C G L L + L + + AL YL
Sbjct: 75 KLIGVITEN-PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SK 130
Query: 184 CIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRG--TIGYMDPEYMTNAK 241
VHRDI N+L++ KL DFGL++ ME+S +G I +M PE + +
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTXXKASKGKLPIKWMAPESINFRR 188
Query: 242 LTCASDIYSFGIVALQLL 259
T ASD++ FG+ ++L
Sbjct: 189 FTSASDVWMFGVCMWEIL 206
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 15/214 (7%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIK-----HIYKSNNTDSFSREVEGLSRVRHPNLVCLFG 127
LG G+ G V G +G VA+K I + RE++ L RHP+++ L+
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 128 CCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVH 187
+ ++V E+ + G L ++ + V E R ++ + A+ Y H ++ +VH
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCHRHM---VVH 134
Query: 188 RDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCAS- 246
RD+K N+LL + K++DFGL+ M M + + G+ Y PE ++
Sbjct: 135 RDLKPENVLLDAHMNAKIADFGLSNM--MSDGEFLRTSCGSPNYAAPEVISGRLYAGPEV 192
Query: 247 DIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
DI+S G++ LL G + D + L +K R
Sbjct: 193 DIWSCGVILYALLCG--TLPFDDEHVPTLFKKIR 224
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 29/222 (13%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G+VYK +G+VVA+K I T+ RE+ L + HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 129 CVEGGEQYLVYEFCAAGNLAQHL--LRKDSVLTWERRVKILRDCALALRYLHHYIDGC-- 184
+ YLV+EF L Q L S LT L YL + G
Sbjct: 71 IHTENKLYLVFEF-----LHQDLKKFMDASALTG-------IPLPLIKSYLFQLLQGLAF 118
Query: 185 -----IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
++HRD+K N+L+ + KL+DFGLA+ G+ + +T T+ Y PE +
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLG 177
Query: 240 AK-LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
K + A DI+S G + ++++ + + D + DQL R R
Sbjct: 178 XKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFR 218
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 121/265 (45%), Gaps = 31/265 (11%)
Query: 74 LGRGSAGLVYK-GVLPSGQVVAIKHIYKSNNTDSFSREVEGLS----RVRHPNLVCLFGC 128
LGRG+ G+V K +PSGQ++A+K I + N+ R + L V P V +G
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 129 CVEGGEQYLVYEF--CAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIV 186
G+ ++ E + + ++ K + + KI AL +LH + ++
Sbjct: 119 LFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVI 176
Query: 187 HRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKL---- 242
HRD+K +N+L+ + K+ DFG++ L +K G YM PE + N +L
Sbjct: 177 HRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTID--AGCKPYMAPERI-NPELNQKG 233
Query: 243 -TCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNI 301
+ SDI+S GI ++L ++ +D+ ++ + V + P+L +
Sbjct: 234 YSVKSDIWSLGITMIEL----AILRFPYDSWGTPFQQLKQVV-------EEPSPQLPADK 282
Query: 302 NRADFESILKIAVLCVAKSSKGRPT 326
A+F + C+ K+SK RPT
Sbjct: 283 FSAEF---VDFTSQCLKKNSKERPT 304
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 26/211 (12%)
Query: 74 LGRGSAGLVYKG------VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRV-----RHPNL 122
LGRG+ G V + + + VA+K + K T S R + ++ H N+
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVK-MLKEGATHSEHRALMSELKILIHIGHHLNV 95
Query: 123 VCLFGCCVE-GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY- 180
V L G C + GG ++ EFC GNL+ +L K + + + +D L L +L Y
Sbjct: 96 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDF-LTLEHLIXYS 154
Query: 181 ----------IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT-DVRGTI 229
+HRD+ NILL+EK K+ DFGLA+ + + V D R +
Sbjct: 155 FQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 230 GYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
+M PE + + T SD++SFG++ ++ S
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 10/197 (5%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGCC 129
+G G+ G+VYK G++VA+K I + RE+ L + HPN+V L
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 130 VEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRD 189
LV+EF + +L ++ + ++KI LR + H I+HRD
Sbjct: 89 HSERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIY--LYQLLRGVAHCHQHRILHRD 144
Query: 190 IKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPE-YMTNAKLTCASDI 248
+K N+L+ KL+DFGLA+ G+ + +T T+ Y P+ M + K + + DI
Sbjct: 145 LKPQNLLINSDGALKLADFGLARAFGI-PVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDI 203
Query: 249 YSFGIVALQLLSGQKVI 265
+S G + ++++G+ +
Sbjct: 204 WSIGCIFAEMITGKPLF 220
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 128/275 (46%), Gaps = 40/275 (14%)
Query: 74 LGRGSAGLVYKGVL-PSGQVVAIKHIYKSNNTDSFSREVEGLSRVRH----PNLVCLFGC 128
+G G+ G V+K +G V+A+K + +S N + R + L V P +V FG
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYID--GCIV 186
+ + ++ E G A+ L ++ ER IL +A+ +Y+ ++
Sbjct: 93 FITNTDVFIAMEL--MGTCAEKLKKRMQGPIPER---ILGKMTVAIVKALYYLKEKHGVI 147
Query: 187 HRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYM-----TNAK 241
HRD+K +NILL E+ + KL DFG++ L +++K + G YM PE + T
Sbjct: 148 HRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS--AGCAAYMAPERIDPPDPTKPD 205
Query: 242 LTCASDIYSFGIVALQLLSGQ---KVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLN 298
+D++S GI ++L +GQ K + DF+ ++ ++ E P L
Sbjct: 206 YDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQE--------------EPPLLP 251
Query: 299 GNIN-RADFESILKIAVLCVAKSSKGRPTIDVVYE 332
G++ DF+S +K C+ K + RP + + E
Sbjct: 252 GHMGFSGDFQSFVKD---CLTKDHRKRPKYNKLLE 283
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 86/190 (45%), Gaps = 15/190 (7%)
Query: 89 SGQVVAIKHIYKSN-NTDSFS---REVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAA 144
+G+ VA+K I K+ N+ S REV + + HPN+V LF YLV E+ +
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPK 204
G + +L+ + E R K R A++Y H IVHRD+K N+LL + K
Sbjct: 98 GEVFDYLVAHGRMKEKEARAK-FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIK 153
Query: 205 LSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCAS-DIYSFGIVALQLLSGQK 263
++DFG + G Y PE K D++S G++ L+SG
Sbjct: 154 IADFGFSNEFTF--GNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS- 210
Query: 264 VIELDFDARD 273
L FD ++
Sbjct: 211 ---LPFDGQN 217
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 80/156 (51%), Gaps = 13/156 (8%)
Query: 118 RHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRK-----------DSVLTWERRVKI 166
+H N++ L G C + G Y++ E+ + GNL ++L + + V + K
Sbjct: 88 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 167 LRDCALAL-RYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKML-GMEESKVFTD 224
L C L R + + +HRD+ N+L+TE K++DFGLA+ + ++ K T+
Sbjct: 148 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 207
Query: 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
R + +M PE + + T SD++SFG++ ++ +
Sbjct: 208 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 29/222 (13%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G+VYK +G+VVA+K I T+ RE+ L + HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 129 CVEGGEQYLVYEFCAAGNLAQHL--LRKDSVLTWERRVKILRDCALALRYLHHYIDGC-- 184
+ YLV+EF L Q L S LT L YL + G
Sbjct: 71 IHTENKLYLVFEF-----LHQDLKKFMDASALTG-------IPLPLIKSYLFQLLQGLAF 118
Query: 185 -----IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
++HRD+K N+L+ + KL+DFGLA+ G+ + +T T+ Y PE +
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLG 177
Query: 240 AK-LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
K + A DI+S G + ++++ + + D + DQL R R
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFR 218
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 29/222 (13%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G+VYK +G+VVA+K I T+ RE+ L + HPN+V L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 129 CVEGGEQYLVYEFCAAGNLAQHL--LRKDSVLTWERRVKILRDCALALRYLHHYIDGC-- 184
+ YLV+EF L Q L S LT L YL + G
Sbjct: 70 IHTENKLYLVFEF-----LHQDLKKFMDASALTG-------IPLPLIKSYLFQLLQGLAF 117
Query: 185 -----IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
++HRD+K N+L+ + KL+DFGLA+ G+ + +T T+ Y PE +
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLG 176
Query: 240 AK-LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
K + A DI+S G + ++++ + + D + DQL R R
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFR 217
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 29/222 (13%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G+VYK +G+VVA+K I T+ RE+ L + HPN+V L
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 129 CVEGGEQYLVYEFCAAGNLAQHL--LRKDSVLTWERRVKILRDCALALRYLHHYIDGC-- 184
+ YLV+EF L Q L S LT L YL + G
Sbjct: 78 IHTENKLYLVFEF-----LHQDLKKFMDASALTG-------IPLPLIKSYLFQLLQGLAF 125
Query: 185 -----IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
++HRD+K N+L+ + KL+DFGLA+ G+ + +T T+ Y PE +
Sbjct: 126 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLG 184
Query: 240 AK-LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
K + A DI+S G + ++++ + + D + DQL R R
Sbjct: 185 XKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFR 225
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 89/181 (49%), Gaps = 16/181 (8%)
Query: 89 SGQVVAIKHIYKSNNTD---SFSREVEGLSRVRHPNLVCLFGCCVEGGEQ--YLVYEFCA 143
+G++VA+K + + + RE+E L + H ++V GCC + GE+ LV E+
Sbjct: 36 TGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVP 95
Query: 144 AGNLAQHLLRKDSVLTWERRVKILRDCALALRYLH--HYIDGCIVHRDIKLTNILLTEKL 201
G+L +L R L + + + + YLH HYI HR + N+LL
Sbjct: 96 LGSLRDYLPRHCVGLA--QLLLFAQQICEGMAYLHAQHYI-----HRALAARNVLLDNDR 148
Query: 202 EPKLSDFGLAKML--GMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLL 259
K+ DFGLAK + G E +V D + + PE + K ASD++SFG+ +LL
Sbjct: 149 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 208
Query: 260 S 260
+
Sbjct: 209 T 209
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 104/230 (45%), Gaps = 15/230 (6%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKH--IYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCV 130
+G GS G+V +G+ VA+K + K + EV + H N+V ++ +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 131 EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDI 190
G E ++V EF G L + + + E+ + AL YLH + ++HRDI
Sbjct: 113 VGDELWVVMEFLEGGALTD--IVTHTRMNEEQIATVCLSVLRALSYLH---NQGVIHRDI 167
Query: 191 KLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYS 250
K +ILLT KLSDFG + E K V GT +M PE ++ DI+S
Sbjct: 168 KSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLV-GTPYWMAPEVISRLPYGTEVDIWS 226
Query: 251 FGIVALQLLSGQKVI--ELDFDA----RDQLTRKARDVSMGKRPIKDFED 294
GI+ ++++ G+ E A RD L + +D+ ++ F D
Sbjct: 227 LGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHKVSSVLRGFLD 276
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 10/197 (5%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGCC 129
+G G+ G+VYK G++VA+K I + RE+ L + HPN+V L
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 130 VEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRD 189
LV+EF + +L ++ + ++KI LR + H I+HRD
Sbjct: 89 HSERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIY--LYQLLRGVAHCHQHRILHRD 144
Query: 190 IKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPE-YMTNAKLTCASDI 248
+K N+L+ KL+DFGLA+ G+ + +T T+ Y P+ M + K + + DI
Sbjct: 145 LKPQNLLINSDGALKLADFGLARAFGI-PVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDI 203
Query: 249 YSFGIVALQLLSGQKVI 265
+S G + ++++G+ +
Sbjct: 204 WSIGCIFAEMITGKPLF 220
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 29/222 (13%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G+VYK +G+VVA+K I T+ RE+ L + HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 129 CVEGGEQYLVYEFCAAGNLAQHL--LRKDSVLTWERRVKILRDCALALRYLHHYIDGC-- 184
+ YLV+EF L Q L S LT L YL + G
Sbjct: 71 IHTENKLYLVFEF-----LHQDLKKFMDASALTG-------IPLPLIKSYLFQLLQGLSF 118
Query: 185 -----IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
++HRD+K N+L+ + KL+DFGLA+ G+ + +T T+ Y PE +
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLG 177
Query: 240 AK-LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
K + A DI+S G + ++++ + + D + DQL R R
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFR 218
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 101/220 (45%), Gaps = 25/220 (11%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G+VYK +G+VVA+K I T+ RE+ L + HPN+V L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC---- 184
+ YLV+EF L +D + L YL + G
Sbjct: 70 IHTENKLYLVFEF----------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 185 ---IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAK 241
++HRD+K N+L+ + KL+DFGLA+ G+ + +T T+ Y PE + K
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCK 178
Query: 242 -LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
+ A DI+S G + ++++ + + D + DQL R R
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFR 217
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 101/220 (45%), Gaps = 25/220 (11%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G+VYK +G+VVA+K I T+ RE+ L + HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC---- 184
+ YLV+EF L +D + L YL + G
Sbjct: 71 IHTENKLYLVFEF----------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 185 ---IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAK 241
++HRD+K N+L+ + KL+DFGLA+ G+ + +T T+ Y PE + K
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCK 179
Query: 242 -LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
+ A DI+S G + ++++ + + D + DQL R R
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFR 218
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 28/211 (13%)
Query: 74 LGRGSAGLVYKG------VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRV-----RHPNL 122
LGRG+ G V + + + VA+K + K T S R + ++ H N+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVK-MLKEGATHSEHRALMSELKILIHIGHHLNV 93
Query: 123 VCLFGCCVE-GGEQYLVYEFCAAGNLAQHLLRKDS-----------VLTWERRVKILRDC 170
V L G C + GG ++ EFC GNL+ +L K + LT E +
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQV 153
Query: 171 ALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT-DVRGTI 229
A + +L +HRD+ NILL+EK K+ DFGLA+ + + V D R +
Sbjct: 154 AKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPL 210
Query: 230 GYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
+M PE + + T SD++SFG++ ++ S
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 75 GRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSR--VRHPNLVCLFGCCVEG 132
RG G V+K L VA+K I+ + S+ E E S ++H NL+ G
Sbjct: 24 ARGRFGCVWKAQL-MNDFVAVK-IFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRG 81
Query: 133 G----EQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC---- 184
E +L+ F G+L +L K +++TW + + L YLH + C
Sbjct: 82 SNLEVELWLITAFHDKGSLTDYL--KGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEG 139
Query: 185 ----IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIG---YMDPEYM 237
I HRD K N+LL L L+DFGLA + E K D G +G YM PE +
Sbjct: 140 HKPSIAHRDFKSKNVLLKSDLTAVLADFGLA--VRFEPGKPPGDTHGQVGTRRYMAPEVL 197
Query: 238 TNA-----KLTCASDIYSFGIVALQLLS 260
A D+Y+ G+V +L+S
Sbjct: 198 EGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 74 LGRGSAGLVYKG------VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFG 127
LG G+ G VYK VL + +V+ K + + E++ L+ HPN+V L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 128 CCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVH 187
+++ EFCA G + +L + LT + + + AL YLH D I+H
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIH 158
Query: 188 RDIKLTNILLTEKLEPKLSDFGLA--KMLGMEESKVFTDVRGTIGYMDPEYMT-----NA 240
RD+K NIL T + KL+DFG++ ++ F GT +M PE + +
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI---GTPYWMAPEVVMCETSKDR 215
Query: 241 KLTCASDIYSFGIVALQL 258
+D++S GI +++
Sbjct: 216 PYDYKADVWSLGITLIEM 233
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 103/199 (51%), Gaps = 15/199 (7%)
Query: 72 RFLGRGSAGLVYKGV-LPSGQ----VVAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV 123
+ LG G+ G VYKG+ +P G+ VAIK + ++ + + E ++ V +P++
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 90
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLL-RKDSVLTWERRVKILRDCALALRYLHHYID 182
L G C+ Q L+ + G L ++ KD++ + +L C + +++ D
Sbjct: 91 RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGS----QYLLNWCVQIAKGMNYLED 145
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAK 241
+VHRD+ N+L+ K++DFGLAK+LG EE + + + I +M E + +
Sbjct: 146 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 205
Query: 242 LTCASDIYSFGIVALQLLS 260
T SD++S+G+ +L++
Sbjct: 206 YTHQSDVWSYGVTVWELMT 224
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 101/220 (45%), Gaps = 25/220 (11%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G+VYK +G+VVA+K I T+ RE+ L + HPN+V L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC---- 184
+ YLV+EF L +D + L YL + G
Sbjct: 72 IHTENKLYLVFEF----------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 185 ---IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAK 241
++HRD+K N+L+ + KL+DFGLA+ G+ + +T T+ Y PE + K
Sbjct: 122 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCK 180
Query: 242 -LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
+ A DI+S G + ++++ + + D + DQL R R
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFR 219
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 29/222 (13%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G+VYK +G+VVA+K I T+ RE+ L + HPN+V L
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 129 CVEGGEQYLVYEFCAAGNLAQHL--LRKDSVLTWERRVKILRDCALALRYLHHYIDGC-- 184
+ YLV+EF L Q L S LT L YL + G
Sbjct: 75 IHTENKLYLVFEF-----LHQDLKKFMDASALTG-------IPLPLIKSYLFQLLQGLAF 122
Query: 185 -----IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
++HRD+K N+L+ + KL+DFGLA+ G+ + +T T+ Y PE +
Sbjct: 123 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLG 181
Query: 240 AK-LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
K + A DI+S G + ++++ + + D + DQL R R
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFR 222
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 89/181 (49%), Gaps = 16/181 (8%)
Query: 89 SGQVVAIKHIYKSNNTD---SFSREVEGLSRVRHPNLVCLFGCCVEGGEQ--YLVYEFCA 143
+G++VA+K + + + RE+E L + H ++V GCC + GE+ LV E+
Sbjct: 37 TGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVP 96
Query: 144 AGNLAQHLLRKDSVLTWERRVKILRDCALALRYLH--HYIDGCIVHRDIKLTNILLTEKL 201
G+L +L R L + + + + YLH HYI HR + N+LL
Sbjct: 97 LGSLRDYLPRHCVGLA--QLLLFAQQICEGMAYLHAQHYI-----HRALAARNVLLDNDR 149
Query: 202 EPKLSDFGLAKML--GMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLL 259
K+ DFGLAK + G E +V D + + PE + K ASD++SFG+ +LL
Sbjct: 150 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 209
Query: 260 S 260
+
Sbjct: 210 T 210
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 74 LGRGSAGLVYKG------VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFG 127
LG G+ G VYK VL + +V+ K + + E++ L+ HPN+V L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 128 CCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVH 187
+++ EFCA G + +L + LT + + + AL YLH D I+H
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIH 158
Query: 188 RDIKLTNILLTEKLEPKLSDFGLA--KMLGMEESKVFTDVRGTIGYMDPEYMT-----NA 240
RD+K NIL T + KL+DFG++ ++ F GT +M PE + +
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI---GTPYWMAPEVVMCETSKDR 215
Query: 241 KLTCASDIYSFGIVALQL 258
+D++S GI +++
Sbjct: 216 PYDYKADVWSLGITLIEM 233
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 123/265 (46%), Gaps = 31/265 (11%)
Query: 74 LGRGSAGLVYK-GVLPSGQVVAIKHIYKSNNTDSFSREVEGLS----RVRHPNLVCLFGC 128
LGRG+ G+V K +PSGQ++A+K I + N+ R + L V P V +G
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 129 CVEGGEQYLVYEF--CAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIV 186
G+ ++ E + + ++ K + + KI AL +LH + ++
Sbjct: 75 LFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVI 132
Query: 187 HRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKL---- 242
HRD+K +N+L+ + K+ DFG++ L + +K G YM PE + N +L
Sbjct: 133 HRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID--AGCKPYMAPERI-NPELNQKG 189
Query: 243 -TCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNI 301
+ SDI+S GI ++L ++ +D+ ++ + V + P P+L +
Sbjct: 190 YSVKSDIWSLGITMIEL----AILRFPYDSWGTPFQQLKQVV--EEP-----SPQLPADK 238
Query: 302 NRADFESILKIAVLCVAKSSKGRPT 326
A+F + C+ K+SK RPT
Sbjct: 239 FSAEF---VDFTSQCLKKNSKERPT 260
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 87/190 (45%), Gaps = 15/190 (7%)
Query: 89 SGQVVAIKHIYKSN-NTDSFS---REVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAA 144
+G+ VA+K I K+ N+ S REV + + HPN+V LF YLV E+ +
Sbjct: 31 TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 90
Query: 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPK 204
G + +L+ + E R K R A++Y H IVHRD+K N+LL + K
Sbjct: 91 GEVFDYLVAHGWMKEKEARAK-FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIK 146
Query: 205 LSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCAS-DIYSFGIVALQLLSGQK 263
++DFG + G+ Y PE K D++S G++ L+SG
Sbjct: 147 IADFGFSNEFTF--GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS- 203
Query: 264 VIELDFDARD 273
L FD ++
Sbjct: 204 ---LPFDGQN 210
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 103/199 (51%), Gaps = 15/199 (7%)
Query: 72 RFLGRGSAGLVYKGV-LPSGQ----VVAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV 123
+ LG G+ G VYKG+ +P G+ VAIK + ++ + + E ++ V +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLL-RKDSVLTWERRVKILRDCALALRYLHHYID 182
L G C+ Q L+ + G L ++ KD++ + +L C + +++ D
Sbjct: 81 RLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGS----QYLLNWCVQIAKGMNYLED 135
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAK 241
+VHRD+ N+L+ K++DFGLAK+LG EE + + + I +M E + +
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 242 LTCASDIYSFGIVALQLLS 260
T SD++S+G+ +L++
Sbjct: 196 YTHQSDVWSYGVTVWELMT 214
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 101/220 (45%), Gaps = 25/220 (11%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G+VYK +G+VVA+K I T+ RE+ L + HPN+V L
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC---- 184
+ YLV+EF L +D + L YL + G
Sbjct: 78 IHTENKLYLVFEF----------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 185 ---IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAK 241
++HRD+K N+L+ + KL+DFGLA+ G+ + +T T+ Y PE + K
Sbjct: 128 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCK 186
Query: 242 -LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
+ A DI+S G + ++++ + + D + DQL R R
Sbjct: 187 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFR 225
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 87/190 (45%), Gaps = 15/190 (7%)
Query: 89 SGQVVAIKHIYKSN-NTDSFS---REVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAA 144
+G+ VA++ I K+ N+ S REV + + HPN+V LF YLV E+ +
Sbjct: 38 TGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPK 204
G + +L+ + E R K R A++Y H IVHRD+K N+LL + K
Sbjct: 98 GEVFDYLVAHGRMKEKEARAK-FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIK 153
Query: 205 LSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCAS-DIYSFGIVALQLLSGQK 263
++DFG + G+ Y PE K D++S G++ L+SG
Sbjct: 154 IADFGFSNEFTF--GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS- 210
Query: 264 VIELDFDARD 273
L FD ++
Sbjct: 211 ---LPFDGQN 217
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 13/194 (6%)
Query: 74 LGRGSAGLV-YKGVLPSGQVVAIKH--IYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCV 130
+G GS G+V V SG++VA+K + K + EV + +H N+V ++ +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 131 EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWER--RVKILRDCALALRYLHHYIDGCIVHR 188
G E ++V EF G L ++T R +I C L+ L ++HR
Sbjct: 99 VGDELWVVMEFLEGGALT-------DIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 151
Query: 189 DIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDI 248
DIK +ILLT KLSDFG + E + V GT +M PE ++ DI
Sbjct: 152 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDI 210
Query: 249 YSFGIVALQLLSGQ 262
+S GI+ ++++ G+
Sbjct: 211 WSLGIMVIEMVDGE 224
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 13/194 (6%)
Query: 74 LGRGSAGLV-YKGVLPSGQVVAIKH--IYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCV 130
+G GS G+V V SG++VA+K + K + EV + +H N+V ++ +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 131 EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWER--RVKILRDCALALRYLHHYIDGCIVHR 188
G E ++V EF G L ++T R +I C L+ L ++HR
Sbjct: 97 VGDELWVVMEFLEGGALT-------DIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 149
Query: 189 DIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDI 248
DIK +ILLT KLSDFG + E + V GT +M PE ++ DI
Sbjct: 150 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDI 208
Query: 249 YSFGIVALQLLSGQ 262
+S GI+ ++++ G+
Sbjct: 209 WSLGIMVIEMVDGE 222
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 103/199 (51%), Gaps = 15/199 (7%)
Query: 72 RFLGRGSAGLVYKGV-LPSGQ----VVAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV 123
+ LG G+ G VYKG+ +P G+ VAIK + ++ + + E ++ V +P++
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLL-RKDSVLTWERRVKILRDCALALRYLHHYID 182
L G C+ Q L+ + G L ++ KD++ + +L C + +++ D
Sbjct: 85 RLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGS----QYLLNWCVQIAKGMNYLED 139
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAK 241
+VHRD+ N+L+ K++DFGLAK+LG EE + + + I +M E + +
Sbjct: 140 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 199
Query: 242 LTCASDIYSFGIVALQLLS 260
T SD++S+G+ +L++
Sbjct: 200 YTHQSDVWSYGVTVWELMT 218
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 103/199 (51%), Gaps = 15/199 (7%)
Query: 72 RFLGRGSAGLVYKGV-LPSGQ----VVAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV 123
+ LG G+ G VYKG+ +P G+ VAIK + ++ + + E ++ V +P++
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLL-RKDSVLTWERRVKILRDCALALRYLHHYID 182
L G C+ Q L+ + G L ++ KD++ + +L C + +++ D
Sbjct: 82 RLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGS----QYLLNWCVQIAKGMNYLED 136
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAK 241
+VHRD+ N+L+ K++DFGLAK+LG EE + + + I +M E + +
Sbjct: 137 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 196
Query: 242 LTCASDIYSFGIVALQLLS 260
T SD++S+G+ +L++
Sbjct: 197 YTHQSDVWSYGVTVWELMT 215
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 103/199 (51%), Gaps = 15/199 (7%)
Query: 72 RFLGRGSAGLVYKGV-LPSGQ----VVAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV 123
+ LG G+ G VYKG+ +P G+ VAIK + ++ + + E ++ V +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLL-RKDSVLTWERRVKILRDCALALRYLHHYID 182
L G C+ Q L+ + G L ++ KD++ + +L C + +++ D
Sbjct: 83 RLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGS----QYLLNWCVQIAKGMNYLED 137
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAK 241
+VHRD+ N+L+ K++DFGLAK+LG EE + + + I +M E + +
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 242 LTCASDIYSFGIVALQLLS 260
T SD++S+G+ +L++
Sbjct: 198 YTHQSDVWSYGVTVWELMT 216
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 103/199 (51%), Gaps = 15/199 (7%)
Query: 72 RFLGRGSAGLVYKGV-LPSGQ----VVAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV 123
+ LG G+ G VYKG+ +P G+ VAIK + ++ + + E ++ V +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLL-RKDSVLTWERRVKILRDCALALRYLHHYID 182
L G C+ Q L+ + G L ++ KD++ + +L C + +++ D
Sbjct: 81 RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGS----QYLLNWCVQIAKGMNYLED 135
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAK 241
+VHRD+ N+L+ K++DFGLAK+LG EE + + + I +M E + +
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 242 LTCASDIYSFGIVALQLLS 260
T SD++S+G+ +L++
Sbjct: 196 YTHQSDVWSYGVTVWELMT 214
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 13/194 (6%)
Query: 74 LGRGSAGLV-YKGVLPSGQVVAIKH--IYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCV 130
+G GS G+V V SG++VA+K + K + EV + +H N+V ++ +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 131 EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWER--RVKILRDCALALRYLHHYIDGCIVHR 188
G E ++V EF G L ++T R +I C L+ L ++HR
Sbjct: 88 VGDELWVVMEFLEGGALT-------DIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 140
Query: 189 DIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDI 248
DIK +ILLT KLSDFG + E + V GT +M PE ++ DI
Sbjct: 141 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDI 199
Query: 249 YSFGIVALQLLSGQ 262
+S GI+ ++++ G+
Sbjct: 200 WSLGIMVIEMVDGE 213
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 103/199 (51%), Gaps = 15/199 (7%)
Query: 72 RFLGRGSAGLVYKGV-LPSGQ----VVAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV 123
+ LG G+ G VYKG+ +P G+ VAIK + ++ + + E ++ V +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLL-RKDSVLTWERRVKILRDCALALRYLHHYID 182
L G C+ Q L+ + G L ++ KD++ + +L C + +++ D
Sbjct: 81 RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGS----QYLLNWCVQIAKGMNYLED 135
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAK 241
+VHRD+ N+L+ K++DFGLAK+LG EE + + + I +M E + +
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 242 LTCASDIYSFGIVALQLLS 260
T SD++S+G+ +L++
Sbjct: 196 YTHQSDVWSYGVTVWELMT 214
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 103/199 (51%), Gaps = 15/199 (7%)
Query: 72 RFLGRGSAGLVYKGV-LPSGQ----VVAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV 123
+ LG G+ G VYKG+ +P G+ VAIK + ++ + + E ++ V +P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLL-RKDSVLTWERRVKILRDCALALRYLHHYID 182
L G C+ Q L+ + G L ++ KD++ + +L C + +++ D
Sbjct: 84 RLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGS----QYLLNWCVQIAKGMNYLED 138
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAK 241
+VHRD+ N+L+ K++DFGLAK+LG EE + + + I +M E + +
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 242 LTCASDIYSFGIVALQLLS 260
T SD++S+G+ +L++
Sbjct: 199 YTHQSDVWSYGVTVWELMT 217
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 74 LGRGSAGLVYKG------VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFG 127
LG G+ G VYK VL + +V+ K + + E++ L+ HPN+V L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 128 CCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVH 187
+++ EFCA G + +L + LT + + + AL YLH D I+H
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIH 158
Query: 188 RDIKLTNILLTEKLEPKLSDFGLA--KMLGMEESKVFTDVRGTIGYMDPEYMT-----NA 240
RD+K NIL T + KL+DFG++ ++ F GT +M PE + +
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI---GTPYWMAPEVVMCETSKDR 215
Query: 241 KLTCASDIYSFGIVALQL 258
+D++S GI +++
Sbjct: 216 PYDYKADVWSLGITLIEM 233
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 103/199 (51%), Gaps = 15/199 (7%)
Query: 72 RFLGRGSAGLVYKGV-LPSGQ----VVAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV 123
+ LG G+ G VYKG+ +P G+ VAIK + ++ + + E ++ V +P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLL-RKDSVLTWERRVKILRDCALALRYLHHYID 182
L G C+ Q L+ + G L ++ KD++ + +L C + +++ D
Sbjct: 84 RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGS----QYLLNWCVQIAKGMNYLED 138
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAK 241
+VHRD+ N+L+ K++DFGLAK+LG EE + + + I +M E + +
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 242 LTCASDIYSFGIVALQLLS 260
T SD++S+G+ +L++
Sbjct: 199 YTHQSDVWSYGVTVWELMT 217
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 103/199 (51%), Gaps = 15/199 (7%)
Query: 72 RFLGRGSAGLVYKGV-LPSGQ----VVAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV 123
+ LG G+ G VYKG+ +P G+ VAIK + ++ + + E ++ V +P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLL-RKDSVLTWERRVKILRDCALALRYLHHYID 182
L G C+ Q L+ + G L ++ KD++ + +L C + +++ D
Sbjct: 84 RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGS----QYLLNWCVQIAKGMNYLED 138
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAK 241
+VHRD+ N+L+ K++DFGLAK+LG EE + + + I +M E + +
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 242 LTCASDIYSFGIVALQLLS 260
T SD++S+G+ +L++
Sbjct: 199 YTHQSDVWSYGVTVWELMT 217
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 103/199 (51%), Gaps = 15/199 (7%)
Query: 72 RFLGRGSAGLVYKGV-LPSGQ----VVAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV 123
+ LG G+ G VYKG+ +P G+ VAIK + ++ + + E ++ V +P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLL-RKDSVLTWERRVKILRDCALALRYLHHYID 182
L G C+ Q L+ + G L ++ KD++ + +L C + +++ D
Sbjct: 84 RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGS----QYLLNWCVQIAKGMNYLED 138
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAK 241
+VHRD+ N+L+ K++DFGLAK+LG EE + + + I +M E + +
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 242 LTCASDIYSFGIVALQLLS 260
T SD++S+G+ +L++
Sbjct: 199 YTHQSDVWSYGVTVWELMT 217
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 103/199 (51%), Gaps = 15/199 (7%)
Query: 72 RFLGRGSAGLVYKGV-LPSGQ----VVAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV 123
+ LG G+ G VYKG+ +P G+ VAIK + ++ + + E ++ V +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLL-RKDSVLTWERRVKILRDCALALRYLHHYID 182
L G C+ Q L+ + G L ++ KD++ + +L C + +++ D
Sbjct: 83 RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGS----QYLLNWCVQIAKGMNYLED 137
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAK 241
+VHRD+ N+L+ K++DFGLAK+LG EE + + + I +M E + +
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 242 LTCASDIYSFGIVALQLLS 260
T SD++S+G+ +L++
Sbjct: 198 YTHQSDVWSYGVTVWELMT 216
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 98/198 (49%), Gaps = 13/198 (6%)
Query: 72 RFLGRGSAGLVYKGV-LPSGQ----VVAIKHIYKSNNTDSFSREVE---GLSRVRHPNLV 123
+ LG G G V+KGV +P G+ V IK I + SF + + + H ++V
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG 183
L G C G LV ++ G+L H+ + L + + A + YL +
Sbjct: 97 RLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH--- 152
Query: 184 CIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK-VFTDVRGTIGYMDPEYMTNAKL 242
+VHR++ N+LL + +++DFG+A +L ++ + ++++ + I +M E + K
Sbjct: 153 GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKY 212
Query: 243 TCASDIYSFGIVALQLLS 260
T SD++S+G+ +L++
Sbjct: 213 THQSDVWSYGVTVWELMT 230
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 103/199 (51%), Gaps = 15/199 (7%)
Query: 72 RFLGRGSAGLVYKGV-LPSGQ----VVAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV 123
+ LG G+ G VYKG+ +P G+ VAIK + ++ + + E ++ V +P++
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLL-RKDSVLTWERRVKILRDCALALRYLHHYID 182
L G C+ Q L+ + G L ++ KD++ + +L C + +++ D
Sbjct: 75 RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGS----QYLLNWCVQIAKGMNYLED 129
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAK 241
+VHRD+ N+L+ K++DFGLAK+LG EE + + + I +M E + +
Sbjct: 130 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 189
Query: 242 LTCASDIYSFGIVALQLLS 260
T SD++S+G+ +L++
Sbjct: 190 YTHQSDVWSYGVTVWELMT 208
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 13/194 (6%)
Query: 74 LGRGSAGLV-YKGVLPSGQVVAIKH--IYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCV 130
+G GS G+V V SG++VA+K + K + EV + +H N+V ++ +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 131 EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWER--RVKILRDCALALRYLHHYIDGCIVHR 188
G E ++V EF G L ++T R +I C L+ L ++HR
Sbjct: 92 VGDELWVVMEFLEGGALT-------DIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 144
Query: 189 DIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDI 248
DIK +ILLT KLSDFG + E + V GT +M PE ++ DI
Sbjct: 145 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDI 203
Query: 249 YSFGIVALQLLSGQ 262
+S GI+ ++++ G+
Sbjct: 204 WSLGIMVIEMVDGE 217
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 98/198 (49%), Gaps = 13/198 (6%)
Query: 72 RFLGRGSAGLVYKGV-LPSGQ----VVAIKHIYKSNNTDSFSREVE---GLSRVRHPNLV 123
+ LG G G V+KGV +P G+ V IK I + SF + + + H ++V
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG 183
L G C G LV ++ G+L H+ + L + + A + YL +
Sbjct: 79 RLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH--- 134
Query: 184 CIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK-VFTDVRGTIGYMDPEYMTNAKL 242
+VHR++ N+LL + +++DFG+A +L ++ + ++++ + I +M E + K
Sbjct: 135 GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKY 194
Query: 243 TCASDIYSFGIVALQLLS 260
T SD++S+G+ +L++
Sbjct: 195 THQSDVWSYGVTVWELMT 212
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 71 RRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKS-----NNTDSFSREVEGLSRV-RHPNLV 123
+ LG+GS G V+ + Q AIK + K ++ + E LS HP L
Sbjct: 23 HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLT 82
Query: 124 CLFGCCVEGGEQ-YLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYID 182
+F C + E + V E+ G+L H+ + R + L L++LH
Sbjct: 83 HMF-CTFQTKENLFFVMEYLNGGDLMYHI-QSCHKFDLSRATFYAAEIILGLQFLH---S 137
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAK--MLGMEESKVFTDVRGTIGYMDPEYMTNA 240
IV+RD+KL NILL + K++DFG+ K MLG ++ F GT Y+ PE +
Sbjct: 138 KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFC---GTPDYIAPEILLGQ 194
Query: 241 KLTCASDIYSFGIVALQLLSGQ 262
K + D +SFG++ ++L GQ
Sbjct: 195 KYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 13/194 (6%)
Query: 74 LGRGSAGLV-YKGVLPSGQVVAIKH--IYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCV 130
+G GS G+V V SG++VA+K + K + EV + +H N+V ++ +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 131 EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWER--RVKILRDCALALRYLHHYIDGCIVHR 188
G E ++V EF G L ++T R +I C L+ L ++HR
Sbjct: 219 VGDELWVVMEFLEGGALT-------DIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 271
Query: 189 DIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDI 248
DIK +ILLT KLSDFG + E + V GT +M PE ++ DI
Sbjct: 272 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDI 330
Query: 249 YSFGIVALQLLSGQ 262
+S GI+ ++++ G+
Sbjct: 331 WSLGIMVIEMVDGE 344
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 103/199 (51%), Gaps = 15/199 (7%)
Query: 72 RFLGRGSAGLVYKGV-LPSGQ----VVAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV 123
+ LG G+ G VYKG+ +P G+ VAIK + ++ + + E ++ V +P++
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 105
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLL-RKDSVLTWERRVKILRDCALALRYLHHYID 182
L G C+ Q L+ + G L ++ KD++ + +L C + +++ D
Sbjct: 106 RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGS----QYLLNWCVQIAKGMNYLED 160
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAK 241
+VHRD+ N+L+ K++DFGLAK+LG EE + + + I +M E + +
Sbjct: 161 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 220
Query: 242 LTCASDIYSFGIVALQLLS 260
T SD++S+G+ +L++
Sbjct: 221 YTHQSDVWSYGVTVWELMT 239
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 103/199 (51%), Gaps = 15/199 (7%)
Query: 72 RFLGRGSAGLVYKGV-LPSGQ----VVAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV 123
+ LG G+ G VYKG+ +P G+ VAIK + ++ + + E ++ V +P++
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLL-RKDSVLTWERRVKILRDCALALRYLHHYID 182
L G C+ Q L+ + G L ++ KD++ + +L C + +++ D
Sbjct: 88 RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGS----QYLLNWCVQIAKGMNYLED 142
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAK 241
+VHRD+ N+L+ K++DFGLAK+LG EE + + + I +M E + +
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 202
Query: 242 LTCASDIYSFGIVALQLLS 260
T SD++S+G+ +L++
Sbjct: 203 YTHQSDVWSYGVTVWELMT 221
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 80/156 (51%), Gaps = 13/156 (8%)
Query: 118 RHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRK-----------DSVLTWERRVKI 166
+H N++ L G C + G Y++ E+ + GNL ++L + + V + K
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 167 LRDCALAL-RYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKML-GMEESKVFTD 224
L C L R + + +HRD+ N+L+TE +++DFGLA+ + ++ K T+
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTN 218
Query: 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
R + +M PE + + T SD++SFG++ ++ +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 87/190 (45%), Gaps = 15/190 (7%)
Query: 89 SGQVVAIKHIYKSN-NTDSFS---REVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAA 144
+G+ VA+K I K+ N S REV + + HPN+V LF YLV E+ +
Sbjct: 39 TGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASG 98
Query: 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPK 204
G + +L+ + E R K R A++Y H IVHRD+K N+LL + K
Sbjct: 99 GEVFDYLVAHGRMKEKEARAK-FRQIVSAVQYCHQ---KYIVHRDLKAENLLLDGDMNIK 154
Query: 205 LSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCAS-DIYSFGIVALQLLSGQK 263
++DFG + + G+ Y PE K D++S G++ L+SG
Sbjct: 155 IADFGFSNEFTV--GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS- 211
Query: 264 VIELDFDARD 273
L FD ++
Sbjct: 212 ---LPFDGQN 218
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 13/194 (6%)
Query: 74 LGRGSAGLV-YKGVLPSGQVVAIKH--IYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCV 130
+G GS G+V V SG++VA+K + K + EV + +H N+V ++ +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 131 EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWER--RVKILRDCALALRYLHHYIDGCIVHR 188
G E ++V EF G L ++T R +I C L+ L ++HR
Sbjct: 142 VGDELWVVMEFLEGGALT-------DIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 194
Query: 189 DIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDI 248
DIK +ILLT KLSDFG + E + V GT +M PE ++ DI
Sbjct: 195 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDI 253
Query: 249 YSFGIVALQLLSGQ 262
+S GI+ ++++ G+
Sbjct: 254 WSLGIMVIEMVDGE 267
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 103/199 (51%), Gaps = 15/199 (7%)
Query: 72 RFLGRGSAGLVYKGV-LPSGQ----VVAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV 123
+ LG G+ G VYKG+ +P G+ VAIK + ++ + + E ++ V +P++
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 86
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLL-RKDSVLTWERRVKILRDCALALRYLHHYID 182
L G C+ Q L+ + G L ++ KD++ + +L C + +++ D
Sbjct: 87 RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGS----QYLLNWCVQIAKGMNYLED 141
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAK 241
+VHRD+ N+L+ K++DFGLAK+LG EE + + + I +M E + +
Sbjct: 142 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 201
Query: 242 LTCASDIYSFGIVALQLLS 260
T SD++S+G+ +L++
Sbjct: 202 YTHQSDVWSYGVTVWELMT 220
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 97/205 (47%), Gaps = 24/205 (11%)
Query: 89 SGQVVAIKHIYK---SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQ--YLVYEFCA 143
+G++VA+K + + + +E++ L + H +++ GCC + G LV E+
Sbjct: 59 TGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVP 118
Query: 144 AGNLAQHLLRKDSVLTWERRVKILRDCALALRYLH--HYIDGCIVHRDIKLTNILLTEKL 201
G+L +L R L + + + + YLH HYI HRD+ N+LL
Sbjct: 119 LGSLRDYLPRHSIGLA--QLLLFAQQICEGMAYLHAQHYI-----HRDLAARNVLLDNDR 171
Query: 202 EPKLSDFGLAKML--GMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLL 259
K+ DFGLAK + G E +V D + + PE + K ASD++SFG+ +LL
Sbjct: 172 LVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 231
Query: 260 S--------GQKVIELDFDARDQLT 276
+ K +EL A+ Q+T
Sbjct: 232 THCDSSQSPPTKFLELIGIAQGQMT 256
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 82/156 (52%), Gaps = 13/156 (8%)
Query: 118 RHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHL-LRKDSVLTW----------ERRVKI 166
+H N++ L G C + G Y++ E+ + GNL ++L R+ L + + K
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 167 LRDCALAL-RYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAK-MLGMEESKVFTD 224
L CA + R + + +HRD+ N+L+TE K++DFGLA+ + ++ K T+
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTN 211
Query: 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
R + +M PE + + T SD++SFG++ ++ +
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 24/205 (11%)
Query: 89 SGQVVAIKHIYK---SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQ--YLVYEFCA 143
+G++VA+K + + + +E++ L + H +++ GCC + GE+ LV E+
Sbjct: 42 TGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVP 101
Query: 144 AGNLAQHLLRKDSVLTWERRVKILRDCALALRYLH--HYIDGCIVHRDIKLTNILLTEKL 201
G+L +L R L + + + + YLH HYI HR++ N+LL
Sbjct: 102 LGSLRDYLPRHSIGLA--QLLLFAQQICEGMAYLHAQHYI-----HRNLAARNVLLDNDR 154
Query: 202 EPKLSDFGLAKML--GMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLL 259
K+ DFGLAK + G E +V D + + PE + K ASD++SFG+ +LL
Sbjct: 155 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
Query: 260 S--------GQKVIELDFDARDQLT 276
+ K +EL A+ Q+T
Sbjct: 215 THCDSSQSPPTKFLELIGIAQGQMT 239
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 24/205 (11%)
Query: 89 SGQVVAIKHIYK---SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQ--YLVYEFCA 143
+G++VA+K + + + +E++ L + H +++ GCC + GE+ LV E+
Sbjct: 42 TGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVP 101
Query: 144 AGNLAQHLLRKDSVLTWERRVKILRDCALALRYLH--HYIDGCIVHRDIKLTNILLTEKL 201
G+L +L R L + + + + YLH HYI HR++ N+LL
Sbjct: 102 LGSLRDYLPRHSIGLA--QLLLFAQQICEGMAYLHSQHYI-----HRNLAARNVLLDNDR 154
Query: 202 EPKLSDFGLAKML--GMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLL 259
K+ DFGLAK + G E +V D + + PE + K ASD++SFG+ +LL
Sbjct: 155 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
Query: 260 S--------GQKVIELDFDARDQLT 276
+ K +EL A+ Q+T
Sbjct: 215 THCDSSQSPPTKFLELIGIAQGQMT 239
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 82/156 (52%), Gaps = 13/156 (8%)
Query: 118 RHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHL-LRKDSVLTW----------ERRVKI 166
+H N++ L G C + G Y++ E+ + GNL ++L R+ L + + K
Sbjct: 84 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 167 LRDCALAL-RYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAK-MLGMEESKVFTD 224
L CA + R + + +HRD+ N+L+TE K++DFGLA+ + ++ K T+
Sbjct: 144 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 203
Query: 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
R + +M PE + + T SD++SFG++ ++ +
Sbjct: 204 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 82/156 (52%), Gaps = 13/156 (8%)
Query: 118 RHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHL-LRKDSVLTW----------ERRVKI 166
+H N++ L G C + G Y++ E+ + GNL ++L R+ L + + K
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 167 LRDCALAL-RYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAK-MLGMEESKVFTD 224
L CA + R + + +HRD+ N+L+TE K++DFGLA+ + ++ K T+
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
R + +M PE + + T SD++SFG++ ++ +
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 27/217 (12%)
Query: 68 DW-DRRF---LGRGSAGLVYK------GVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRV 117
DW D +F +G G+ G V K G+ + +K ++ F+ E+E L ++
Sbjct: 20 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKL 79
Query: 118 -RHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALAL-- 174
HPN++ L G C G YL E+ GNL LRK VL + I A L
Sbjct: 80 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD-FLRKSRVLETDPAFAIANSTASTLSS 138
Query: 175 -RYLHHYIDGC----------IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT 223
+ LH D +HR++ NIL+ E K++DFGL++ G E T
Sbjct: 139 QQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSR--GQEVYVKKT 196
Query: 224 DVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
R + +M E + + T SD++S+G++ +++S
Sbjct: 197 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 82/156 (52%), Gaps = 13/156 (8%)
Query: 118 RHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHL-LRKDSVLTW----------ERRVKI 166
+H N++ L G C + G Y++ E+ + GNL ++L R+ L + + K
Sbjct: 85 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 167 LRDCALAL-RYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAK-MLGMEESKVFTD 224
L CA + R + + +HRD+ N+L+TE K++DFGLA+ + ++ K T+
Sbjct: 145 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 204
Query: 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
R + +M PE + + T SD++SFG++ ++ +
Sbjct: 205 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 104/222 (46%), Gaps = 29/222 (13%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G+VYK +G+VVA+K I T+ RE+ L + HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALAL--RYLHHYIDGC-- 184
+ YLV+EF L Q L KD + L L L YL + G
Sbjct: 71 IHTENKLYLVFEF-----LHQDL--KDFM-----DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 185 -----IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
++HRD+K N+L+ + KL+DFGLA+ G+ +V T+ Y PE +
Sbjct: 119 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLG 177
Query: 240 AK-LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
K + A DI+S G + ++++ + + D + DQL R R
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFR 218
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 82/156 (52%), Gaps = 13/156 (8%)
Query: 118 RHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHL-LRKDSVLTW----------ERRVKI 166
+H N++ L G C + G Y++ E+ + GNL ++L R+ L + + K
Sbjct: 81 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 167 LRDCALAL-RYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAK-MLGMEESKVFTD 224
L CA + R + + +HRD+ N+L+TE K++DFGLA+ + ++ K T+
Sbjct: 141 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 200
Query: 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
R + +M PE + + T SD++SFG++ ++ +
Sbjct: 201 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 102/199 (51%), Gaps = 15/199 (7%)
Query: 72 RFLGRGSAGLVYKGV-LPSGQ----VVAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV 123
+ LG G+ G VYKG+ +P G+ VAIK + ++ + + E ++ V +P++
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 77
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLL-RKDSVLTWERRVKILRDCALALRYLHHYID 182
L G C+ Q L+ + G L ++ KD++ + +L C +++ D
Sbjct: 78 RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGS----QYLLNWCVQIAEGMNYLED 132
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAK 241
+VHRD+ N+L+ K++DFGLAK+LG EE + + + I +M E + +
Sbjct: 133 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 192
Query: 242 LTCASDIYSFGIVALQLLS 260
T SD++S+G+ +L++
Sbjct: 193 YTHQSDVWSYGVTVWELMT 211
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 25/211 (11%)
Query: 74 LGRGSAGLVYKG------VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRV-----RHPNL 122
LGRG+ G V + + + VA+K + K T S R + ++ H N+
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVK-MLKEGATHSEHRALMSELKILIHIGHHLNV 94
Query: 123 VCLFGCCVE-GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY- 180
V L G C + GG ++ EFC GNL+ +L K + + + L L L +L Y
Sbjct: 95 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYS 154
Query: 181 ----------IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT-DVRGTI 229
+HRD+ NILL+EK K+ DFGLA+ + + V D R +
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 230 GYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
+M PE + + T SD++SFG++ ++ S
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 90/186 (48%), Gaps = 25/186 (13%)
Query: 93 VAIKHIYKSNNTD---SFSREVEGLSRV-RHPNLVCLFGCCVEGGEQYLVYEFCAAGNLA 148
VA+K + + + D + E++ +S + +H N+V L G C GG ++ E+C G+L
Sbjct: 71 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 130
Query: 149 QHLLRKDSVLTWERRVKILRDCALALRYLHHYID------------GCIVHRDIKLTNIL 196
L RK E + L LR L H+ CI HRD+ N+L
Sbjct: 131 NFLRRKA-----EADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCI-HRDVAARNVL 184
Query: 197 LTEKLEPKLSDFGLAKMLGMEESK--VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIV 254
LT K+ DFGLA+ + M +S V + R + +M PE + + T SD++S+GI+
Sbjct: 185 LTNGHVAKIGDFGLARDI-MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGIL 243
Query: 255 ALQLLS 260
++ S
Sbjct: 244 LWEIFS 249
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 82/156 (52%), Gaps = 13/156 (8%)
Query: 118 RHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHL-LRKDSVLTW----------ERRVKI 166
+H N++ L G C + G Y++ E+ + GNL ++L R+ L + + K
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 167 LRDCALAL-RYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAK-MLGMEESKVFTD 224
L CA + R + + +HRD+ N+L+TE K++DFGLA+ + ++ K T+
Sbjct: 193 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 252
Query: 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
R + +M PE + + T SD++SFG++ ++ +
Sbjct: 253 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 25/220 (11%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G+VYK +G+VVA+K I T+ RE+ L + HPN+V L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC---- 184
+ YLV+EF L +D + L YL + G
Sbjct: 74 IHTENKLYLVFEF----------LHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 185 ---IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAK 241
++HRD+K N+L+ + KL+DFGLA+ G+ +V T+ Y PE + K
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 182
Query: 242 -LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
+ A DI+S G + ++++ + + D + DQL R R
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFR 221
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 90/186 (48%), Gaps = 25/186 (13%)
Query: 93 VAIKHIYKSNNTD---SFSREVEGLSRV-RHPNLVCLFGCCVEGGEQYLVYEFCAAGNLA 148
VA+K + + + D + E++ +S + +H N+V L G C GG ++ E+C G+L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 149 QHLLRKDSVLTWERRVKILRDCALALRYLHHYID------------GCIVHRDIKLTNIL 196
L RK E + L LR L H+ CI HRD+ N+L
Sbjct: 139 NFLRRKA-----EADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCI-HRDVAARNVL 192
Query: 197 LTEKLEPKLSDFGLAKMLGMEESK--VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIV 254
LT K+ DFGLA+ + M +S V + R + +M PE + + T SD++S+GI+
Sbjct: 193 LTNGHVAKIGDFGLARDI-MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGIL 251
Query: 255 ALQLLS 260
++ S
Sbjct: 252 LWEIFS 257
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 82/156 (52%), Gaps = 13/156 (8%)
Query: 118 RHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHL-LRKDSVLTW----------ERRVKI 166
+H N++ L G C + G Y++ E+ + GNL ++L R+ L + + K
Sbjct: 77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 167 LRDCALAL-RYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAK-MLGMEESKVFTD 224
L CA + R + + +HRD+ N+L+TE K++DFGLA+ + ++ K T+
Sbjct: 137 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 196
Query: 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
R + +M PE + + T SD++SFG++ ++ +
Sbjct: 197 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 93/202 (46%), Gaps = 26/202 (12%)
Query: 72 RFLGRGSAGLVY------------KGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRH 119
R LG GS G V+ VL VV +K + +N+ E LS V H
Sbjct: 12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTND------ERLMLSIVTH 65
Query: 120 PNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHH 179
P ++ ++G + + +++ ++ G L LLRK + LAL YLH
Sbjct: 66 PFIIRMWGTFQDAQQIFMIMDYIEGGELFS-LLRKSQRFPNPVAKFYAAEVCLALEYLH- 123
Query: 180 YIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
I++RD+K NILL + K++DFG AK + V + GT Y+ PE ++
Sbjct: 124 --SKDIIYRDLKPENILLDKNGHIKITDFGFAKYV----PDVTYXLCGTPDYIAPEVVST 177
Query: 240 AKLTCASDIYSFGIVALQLLSG 261
+ D +SFGI+ ++L+G
Sbjct: 178 KPYNKSIDWWSFGILIYEMLAG 199
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 82/156 (52%), Gaps = 13/156 (8%)
Query: 118 RHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHL-LRKDSVLTW----------ERRVKI 166
+H N++ L G C + G Y++ E+ + GNL ++L R+ L + + K
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 167 LRDCALAL-RYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAK-MLGMEESKVFTD 224
L CA + R + + +HRD+ N+L+TE K++DFGLA+ + ++ K T+
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
R + +M PE + + T SD++SFG++ ++ +
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 25/220 (11%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G+VYK +G+VVA+K I T+ RE+ L + HPN+V L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC---- 184
+ YLV+EF + +L + + S LT L YL + G
Sbjct: 72 IHTENKLYLVFEFLSM-DLKKFM--DASALTG-------IPLPLIKSYLFQLLQGLAFCH 121
Query: 185 ---IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAK 241
++HRD+K N+L+ + KL+DFGLA+ G+ +V T+ Y PE + K
Sbjct: 122 SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 180
Query: 242 -LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
+ A DI+S G + ++++ + + D + DQL R R
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFR 219
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 25/220 (11%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G+VYK +G+VVA+K I T+ RE+ L + HPN+V L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC---- 184
+ YLV+EF + +L + + S LT L YL + G
Sbjct: 74 IHTENKLYLVFEFLSM-DLKKFM--DASALTG-------IPLPLIKSYLFQLLQGLAFCH 123
Query: 185 ---IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAK 241
++HRD+K N+L+ + KL+DFGLA+ G+ +V T+ Y PE + K
Sbjct: 124 SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 182
Query: 242 -LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
+ A DI+S G + ++++ + + D + DQL R R
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFR 221
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 82/156 (52%), Gaps = 13/156 (8%)
Query: 118 RHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHL-LRKDSVLTW----------ERRVKI 166
+H N++ L G C + G Y++ E+ + GNL ++L R+ L + + K
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 167 LRDCALAL-RYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAK-MLGMEESKVFTD 224
L CA + R + + +HRD+ N+L+TE K++DFGLA+ + ++ K T+
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
R + +M PE + + T SD++SFG++ ++ +
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 13/195 (6%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIK-----HIYKSNNTDSFSREVEGLSRVRHPNLVCLFG 127
LG G+ G V G +G VA+K I + RE++ L RHP+++ L+
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 128 CCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVH 187
+ ++V E+ + G L ++ + + E R ++ + + Y H ++ +VH
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESR-RLFQQILSGVDYCHRHM---VVH 139
Query: 188 RDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCAS- 246
RD+K N+LL + K++DFGL+ M M + + G+ Y PE ++
Sbjct: 140 RDLKPENVLLDAHMNAKIADFGLSNM--MSDGEFLRXSCGSPNYAAPEVISGRLYAGPEV 197
Query: 247 DIYSFGIVALQLLSG 261
DI+S G++ LL G
Sbjct: 198 DIWSSGVILYALLCG 212
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 25/220 (11%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G+VYK +G+VVA+K I T+ RE+ L + HPN+V L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC---- 184
+ YLV+EF L +D + L YL + G
Sbjct: 70 IHTENKLYLVFEF----------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 185 ---IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAK 241
++HRD+K N+L+ + KL+DFGLA+ G+ +V T+ Y PE + K
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 178
Query: 242 -LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
+ A DI+S G + ++++ + + D + DQL R R
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFR 217
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 27/205 (13%)
Query: 80 GLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRV-RHPNLVCLFGCCVEGGEQYLV 138
G+ GV V +K S+ ++ E++ ++++ H N+V L G C G YL+
Sbjct: 68 GISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLI 127
Query: 139 YEFCAAGNLAQHLLRKD----------------------SVLTWERRVKILRDCALALRY 176
+E+C G+L +L K +VLT+E + A + +
Sbjct: 128 FEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEF 187
Query: 177 LHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT-DVRGTIGYMDPE 235
L C VHRD+ N+L+T K+ DFGLA+ + + + V + R + +M PE
Sbjct: 188 LE--FKSC-VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPE 244
Query: 236 YMTNAKLTCASDIYSFGIVALQLLS 260
+ T SD++S+GI+ ++ S
Sbjct: 245 SLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 11/200 (5%)
Query: 68 DWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFSREVEGLSRVR-HPNLVCL 125
D + LG GS + K V S Q A+K I K ++ +E+ L HPN+V L
Sbjct: 13 DLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANT-QKEITALKLCEGHPNIVKL 71
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+ +LV E G L + + +K E I+R A+ ++H D +
Sbjct: 72 HEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASY-IMRKLVSAVSHMH---DVGV 127
Query: 186 VHRDIKLTNILLTEK---LEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKL 242
VHRD+K N+L T++ LE K+ DFG A++ + + T T+ Y PE +
Sbjct: 128 VHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF-TLHYAAPELLNQNGY 186
Query: 243 TCASDIYSFGIVALQLLSGQ 262
+ D++S G++ +LSGQ
Sbjct: 187 DESCDLWSLGVILYTMLSGQ 206
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 25/220 (11%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G+VYK +G+VVA+K I T+ RE+ L + HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC---- 184
+ YLV+EF L +D + L YL + G
Sbjct: 71 IHTENKLYLVFEF----------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 185 ---IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAK 241
++HRD+K N+L+ + KL+DFGLA+ G+ +V T+ Y PE + K
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 179
Query: 242 -LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
+ A DI+S G + ++++ + + D + DQL R R
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFR 218
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 25/220 (11%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G+VYK +G+VVA+K I T+ RE+ L + HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC---- 184
+ YLV+EF L +D + L YL + G
Sbjct: 71 IHTENKLYLVFEF----------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 185 ---IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAK 241
++HRD+K N+L+ + KL+DFGLA+ G+ +V T+ Y PE + K
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 179
Query: 242 -LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
+ A DI+S G + ++++ + + D + DQL R R
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFR 218
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 25/220 (11%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G+VYK +G+VVA+K I T+ RE+ L + HPN+V L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC---- 184
+ YLV+EF L +D + L YL + G
Sbjct: 70 IHTENKLYLVFEF----------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 185 ---IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAK 241
++HRD+K N+L+ + KL+DFGLA+ G+ +V T+ Y PE + K
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 178
Query: 242 -LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
+ A DI+S G + ++++ + + D + DQL R R
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFR 217
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 25/220 (11%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G+VYK +G+VVA+K I T+ RE+ L + HPN+V L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC---- 184
+ YLV+EF L +D + L YL + G
Sbjct: 74 IHTENKLYLVFEF----------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 185 ---IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAK 241
++HRD+K N+L+ + KL+DFGLA+ G+ +V T+ Y PE + K
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 182
Query: 242 -LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
+ A DI+S G + ++++ + + D + DQL R R
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFR 221
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 25/220 (11%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G+VYK +G+VVA+K I T+ RE+ L + HPN+V L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC---- 184
+ YLV+EF L +D + L YL + G
Sbjct: 73 IHTENKLYLVFEF----------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 185 ---IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAK 241
++HRD+K N+L+ + KL+DFGLA+ G+ +V T+ Y PE + K
Sbjct: 123 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 181
Query: 242 -LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
+ A DI+S G + ++++ + + D + DQL R R
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFR 220
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 25/220 (11%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G+VYK +G+VVA+K I T+ RE+ L + HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC---- 184
+ YLV+EF L +D + L YL + G
Sbjct: 71 IHTENKLYLVFEF----------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 185 ---IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAK 241
++HRD+K N+L+ + KL+DFGLA+ G+ +V T+ Y PE + K
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 179
Query: 242 -LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
+ A DI+S G + ++++ + + D + DQL R R
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFR 218
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 25/220 (11%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G+VYK +G+VVA+K I T+ RE+ L + HPN+V L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC---- 184
+ YLV+EF L +D + L YL + G
Sbjct: 72 IHTENKLYLVFEF----------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 185 ---IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAK 241
++HRD+K N+L+ + KL+DFGLA+ G+ +V T+ Y PE + K
Sbjct: 122 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 180
Query: 242 -LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
+ A DI+S G + ++++ + + D + DQL R R
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFR 219
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 79/156 (50%), Gaps = 13/156 (8%)
Query: 118 RHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRK-----------DSVLTWERRVKI 166
+H N++ L G C + G Y++ + + GNL ++L + + V + K
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 167 LRDCALAL-RYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKML-GMEESKVFTD 224
L C L R + + +HRD+ N+L+TE K++DFGLA+ + ++ K T+
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
R + +M PE + + T SD++SFG++ ++ +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 25/220 (11%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G+VYK +G+VVA+K I T+ RE+ L + HPN+V L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC---- 184
+ YLV+EF L +D + L YL + G
Sbjct: 73 IHTENKLYLVFEF----------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 185 ---IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAK 241
++HRD+K N+L+ + KL+DFGLA+ G+ +V T+ Y PE + K
Sbjct: 123 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 181
Query: 242 -LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
+ A DI+S G + ++++ + + D + DQL R R
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFR 220
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 25/220 (11%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G+VYK +G+VVA+K I T+ RE+ L + HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC---- 184
+ YLV+EF L +D + L YL + G
Sbjct: 71 IHTENKLYLVFEF----------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 185 ---IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAK 241
++HRD+K N+L+ + KL+DFGLA+ G+ +V T+ Y PE + K
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 179
Query: 242 -LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
+ A DI+S G + ++++ + + D + DQL R R
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFR 218
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 93/200 (46%), Gaps = 21/200 (10%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIKHI----YKSNNTDSFSREVEGLSRVRHPNLVCLFGC 128
LG+G+ +V + + +P+GQ A K I + + RE ++HPN+V L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC---- 184
E G YLV++ G L + ++ R D + ++ + ++ C
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIV--------AREYYSEADASHCIQQILESVNHCHLNG 123
Query: 185 IVHRDIKLTNILLTEKLEP---KLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAK 241
IVHRD+K N+LL K + KL+DFGLA + ++ F GT GY+ PE +
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWF-GFAGTPGYLSPEVLRKDP 182
Query: 242 LTCASDIYSFGIVALQLLSG 261
D+++ G++ LL G
Sbjct: 183 YGKPVDMWACGVILYILLVG 202
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 25/220 (11%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G+VYK +G+VVA+K I T+ RE+ L + HPN+V L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC---- 184
+ YLV+EF L +D + L YL + G
Sbjct: 74 IHTENKLYLVFEF----------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 185 ---IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAK 241
++HRD+K N+L+ + KL+DFGLA+ G+ +V T+ Y PE + K
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 182
Query: 242 -LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
+ A DI+S G + ++++ + + D + DQL R R
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFR 221
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 25/220 (11%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G+VYK +G+VVA+K I T+ RE+ L + HPN+V L
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC---- 184
+ YLV+EF L +D + L YL + G
Sbjct: 75 IHTENKLYLVFEF----------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 124
Query: 185 ---IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAK 241
++HRD+K N+L+ + KL+DFGLA+ G+ +V T+ Y PE + K
Sbjct: 125 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 183
Query: 242 -LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
+ A DI+S G + ++++ + + D + DQL R R
Sbjct: 184 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFR 222
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 25/220 (11%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G+VYK +G+VVA+K I T+ RE+ L + HPN+V L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC---- 184
+ YLV+EF L +D + L YL + G
Sbjct: 73 IHTENKLYLVFEF----------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 185 ---IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAK 241
++HRD+K N+L+ + KL+DFGLA+ G+ +V T+ Y PE + K
Sbjct: 123 SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 181
Query: 242 -LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
+ A DI+S G + ++++ + + D + DQL R R
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFR 220
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 25/220 (11%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G+VYK +G+VVA+ I T+ RE+ L + HPN+V L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC---- 184
+ YLV+EF L +D + L YL + G
Sbjct: 71 IHTENKLYLVFEF----------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 185 ---IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAK 241
++HRD+K N+L+ + KL+DFGLA+ G+ + +T T+ Y PE + K
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCK 179
Query: 242 -LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
+ A DI+S G + ++++ + + D + DQL R R
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFR 218
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 25/220 (11%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G+VYK +G+VVA+ I T+ RE+ L + HPN+V L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC---- 184
+ YLV+EF L +D + L YL + G
Sbjct: 70 IHTENKLYLVFEF----------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 185 ---IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAK 241
++HRD+K N+L+ + KL+DFGLA+ G+ + +T T+ Y PE + K
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCK 178
Query: 242 -LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
+ A DI+S G + ++++ + + D + DQL R R
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFR 217
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 87/190 (45%), Gaps = 15/190 (7%)
Query: 89 SGQVVAIKHIYKSN-NTDSFS---REVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAA 144
+G+ VAIK I K+ N S REV + + HPN+V LF YL+ E+ +
Sbjct: 36 TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASG 95
Query: 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPK 204
G + +L+ + E R K R A++Y H IVHRD+K N+LL + K
Sbjct: 96 GEVFDYLVAHGRMKEKEARSK-FRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIK 151
Query: 205 LSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCAS-DIYSFGIVALQLLSGQK 263
++DFG + + G+ Y PE K D++S G++ L+SG
Sbjct: 152 IADFGFSNEFTV--GGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS- 208
Query: 264 VIELDFDARD 273
L FD ++
Sbjct: 209 ---LPFDGQN 215
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 25/220 (11%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G+VYK +G+VVA+K I T+ RE+ L + HPN+V L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC---- 184
+ YLV+EF L +D + L YL + G
Sbjct: 72 IHTENKLYLVFEF----------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 185 ---IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAK 241
++HRD+K N+L+ + KL+DFGLA+ G+ +V T+ Y PE + K
Sbjct: 122 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 180
Query: 242 -LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
+ A DI+S G + ++++ + + D + DQL R R
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFR 219
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 31/215 (14%)
Query: 74 LGRGSAGLVYK----GVLPS--GQVVAIKHIYKS---NNTDSFSREVEGLSRV-RHPNLV 123
LG G+ G V + G++ S VA+K + S ++ E++ LS + H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLLRK-DSVLTWERRVKILR-------------- 168
L G C GG ++ E+C G+L L RK DS + + I+
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 169 --DCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT-DV 225
A + +L CI HRD+ NILLT K+ DFGLA+ + + + V +
Sbjct: 174 SYQVAKGMAFLAS--KNCI-HRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 226 RGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
R + +M PE + N T SD++S+GI +L S
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 28/211 (13%)
Query: 74 LGRGSAGLVYKG------VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRV-----RHPNL 122
LGRG+ G V + + + VA+K + K T S R + ++ H N+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVK-MLKEGATHSEHRALMSELKILIHIGHHLNV 93
Query: 123 VCLFGCCVE-GGEQYLVYEFCAAGNLAQHLLRKDS-----------VLTWERRVKILRDC 170
V L G C + GG ++ EFC GNL+ +L K + LT E +
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQV 153
Query: 171 ALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT-DVRGTI 229
A + +L +HRD+ NILL+EK K+ DFGLA+ + + V D R +
Sbjct: 154 AKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 210
Query: 230 GYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
+M PE + + T SD++SFG++ ++ S
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 25/220 (11%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G+VYK +G+VVA+K I T+ RE+ L + HPN+V L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC---- 184
+ YLV+EF L +D + L YL + G
Sbjct: 72 IHTENKLYLVFEF----------LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 185 ---IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAK 241
++HRD+K N+L+ + KL+DFGLA+ G+ +V T+ Y PE + K
Sbjct: 122 SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 180
Query: 242 -LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
+ A DI+S G + ++++ + + D + DQL R R
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFR 219
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 93/200 (46%), Gaps = 21/200 (10%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIKHI----YKSNNTDSFSREVEGLSRVRHPNLVCLFGC 128
LG+G+ +V + + +P+GQ A K I + + RE ++HPN+V L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC---- 184
E G YLV++ G L + ++ R D + ++ + ++ C
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIV--------AREYYSEADASHCIQQILESVNHCHLNG 123
Query: 185 IVHRDIKLTNILLTEKLEP---KLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAK 241
IVHRD+K N+LL K + KL+DFGLA + ++ F GT GY+ PE +
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWF-GFAGTPGYLSPEVLRKDP 182
Query: 242 LTCASDIYSFGIVALQLLSG 261
D+++ G++ LL G
Sbjct: 183 YGKPVDMWACGVILYILLVG 202
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 102/222 (45%), Gaps = 29/222 (13%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G+VYK +G+VVA+K I T+ RE+ L + HPN+V L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALAL--RYLHHYIDGC-- 184
+ YLV+EF + KD + L L L YL + G
Sbjct: 73 IHTENKLYLVFEFLSMD-------LKDFM-----DASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 185 -----IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
++HRD+K N+L+ + KL+DFGLA+ G+ +V T+ Y PE +
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLG 179
Query: 240 AK-LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
K + A DI+S G + ++++ + + D + DQL R R
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFR 220
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 91/187 (48%), Gaps = 21/187 (11%)
Query: 93 VAIKHIYKSNNTD---SFSREVEGLSRV-RHPNLVCLFGCCVEGGEQYLVYEFCAAGNLA 148
VA+K + + + D + E++ +S + +H N+V L G C GG ++ E+C G+L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 149 QHLLRKDSV-LTWERRVKILRDCALALRYLHHYID------------GCIVHRDIKLTNI 195
L RK L + + L+ R L H+ CI HRD+ N+
Sbjct: 139 NFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCI-HRDVAARNV 197
Query: 196 LLTEKLEPKLSDFGLAKMLGMEESK--VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGI 253
LLT K+ DFGLA+ + M +S V + R + +M PE + + T SD++S+GI
Sbjct: 198 LLTNGHVAKIGDFGLARDI-MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 256
Query: 254 VALQLLS 260
+ ++ S
Sbjct: 257 LLWEIFS 263
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 102/222 (45%), Gaps = 29/222 (13%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G+VYK +G+VVA+K I T+ RE+ L + HPN+V L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALAL--RYLHHYIDGC-- 184
+ YLV+EF + KD + L L L YL + G
Sbjct: 74 IHTENKLYLVFEFLSMD-------LKDFM-----DASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 185 -----IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
++HRD+K N+L+ + KL+DFGLA+ G+ +V T+ Y PE +
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLG 180
Query: 240 AK-LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
K + A DI+S G + ++++ + + D + DQL R R
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFR 221
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 31/215 (14%)
Query: 74 LGRGSAGLVYK----GVLPS--GQVVAIKHIYKS---NNTDSFSREVEGLSRV-RHPNLV 123
LG G+ G V + G++ S VA+K + S ++ E++ LS + H N+V
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLLRK-DSVLTWERRVKILR-------------- 168
L G C GG ++ E+C G+L L RK DS + + I+
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 169 --DCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT-DV 225
A + +L CI HRD+ NILLT K+ DFGLA+ + + + V +
Sbjct: 167 SYQVAKGMAFLAS--KNCI-HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 226 RGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
R + +M PE + N T SD++S+GI +L S
Sbjct: 224 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 74/149 (49%), Gaps = 5/149 (3%)
Query: 119 HPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLH 178
HP LV L C + V E+ G+L H+ R+ L E + +LAL YLH
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK-LPEEHARFYSAEISLALNYLH 127
Query: 179 HYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMT 238
+ I++RD+KL N+LL + KL+D+G+ K G+ + GT Y+ PE +
Sbjct: 128 ---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSXFCGTPNYIAPEILR 183
Query: 239 NAKLTCASDIYSFGIVALQLLSGQKVIEL 267
+ D ++ G++ ++++G+ ++
Sbjct: 184 GEDYGFSVDWWALGVLMFEMMAGRSPFDI 212
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 79/156 (50%), Gaps = 13/156 (8%)
Query: 118 RHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRK-----------DSVLTWERRVKI 166
+H N++ L G C + G Y++ + + GNL ++L + + V + K
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 167 LRDCALAL-RYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKML-GMEESKVFTD 224
L C L R + + +HRD+ N+L+TE K++DFGLA+ + ++ K T+
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
R + +M PE + + T SD++SFG++ ++ +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 5/149 (3%)
Query: 119 HPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLH 178
HP LV L C + V E+ G+L H+ R+ + R + +LAL YLH
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH 123
Query: 179 HYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMT 238
+ I++RD+KL N+LL + KL+D+G+ K G+ + GT Y+ PE +
Sbjct: 124 ---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSXFCGTPNYIAPEILR 179
Query: 239 NAKLTCASDIYSFGIVALQLLSGQKVIEL 267
+ D ++ G++ ++++G+ ++
Sbjct: 180 GEDYGFSVDWWALGVLMFEMMAGRSPFDI 208
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 32/215 (14%)
Query: 74 LGRGSAGLVYKG------VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRV-----RHPNL 122
LGRG+ G V + + + VA+K + K T S R + ++ H N+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVK-MLKEGATHSEHRALMSELKILIHIGHHLNV 84
Query: 123 VCLFGCCVE-GGEQYLVYEFCAAGNLAQHLLRKDS---------------VLTWERRVKI 166
V L G C + GG ++ EFC GNL+ +L K + LT E +
Sbjct: 85 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 167 LRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT-DV 225
A + +L CI HRD+ NILL+EK K+ DFGLA+ + + V D
Sbjct: 145 SFQVAKGMEFLAS--RKCI-HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 226 RGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
R + +M PE + + T SD++SFG++ ++ S
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 5/149 (3%)
Query: 119 HPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLH 178
HP LV L C + V E+ G+L H+ R+ + R + +LAL YLH
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH 170
Query: 179 HYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMT 238
+ I++RD+KL N+LL + KL+D+G+ K G+ + GT Y+ PE +
Sbjct: 171 ---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSTFCGTPNYIAPEILR 226
Query: 239 NAKLTCASDIYSFGIVALQLLSGQKVIEL 267
+ D ++ G++ ++++G+ ++
Sbjct: 227 GEDYGFSVDWWALGVLMFEMMAGRSPFDI 255
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 91/202 (45%), Gaps = 12/202 (5%)
Query: 72 RFLGRGSAGLVYKG-VLPSGQVVAIKH-----IYKSNNTDSFSREVEGLSRVR-HPNLVC 124
R LG+GS G V V +G + A+K I + ++ + E LS R HP L
Sbjct: 29 RVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQ 88
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
LF C + V EF G+L H+ +K R + AL +LH D
Sbjct: 89 LFCCFQTPDRLFFVMEFVNGGDLMFHI-QKSRRFDEARARFYAAEIISALMFLH---DKG 144
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTC 244
I++RD+KL N+LL + KL+DFG+ K G+ GT Y+ PE +
Sbjct: 145 IIYRDLKLDNVLLDHEGHCKLADFGMCKE-GICNGVTTATFCGTPDYIAPEILQEMLYGP 203
Query: 245 ASDIYSFGIVALQLLSGQKVIE 266
A D ++ G++ ++L G E
Sbjct: 204 AVDWWAMGVLLYEMLCGHAPFE 225
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 10/161 (6%)
Query: 105 DSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRV 164
+ REV L +V H N++ L + L+ E + G L L +K+S L+ E
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEAT 118
Query: 165 KILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP----KLSDFGLAKMLGMEESK 220
++ + YLH I H D+K NI+L +K P KL DFGLA + E+
Sbjct: 119 SFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGV 173
Query: 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
F ++ GT ++ PE + L +D++S G++ LLSG
Sbjct: 174 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 5/149 (3%)
Query: 119 HPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLH 178
HP LV L C + V E+ G+L H+ R+ + R + +LAL YLH
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH 138
Query: 179 HYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMT 238
+ I++RD+KL N+LL + KL+D+G+ K G+ + GT Y+ PE +
Sbjct: 139 ---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSXFCGTPNYIAPEILR 194
Query: 239 NAKLTCASDIYSFGIVALQLLSGQKVIEL 267
+ D ++ G++ ++++G+ ++
Sbjct: 195 GEDYGFSVDWWALGVLMFEMMAGRSPFDI 223
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 102/199 (51%), Gaps = 15/199 (7%)
Query: 72 RFLGRGSAGLVYKGV-LPSGQ----VVAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV 123
+ LG G+ G VYKG+ +P G+ VAIK + ++ + + E ++ V +P++
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLL-RKDSVLTWERRVKILRDCALALRYLHHYID 182
L G C+ Q L+ + G L ++ KD++ + +L C + +++ D
Sbjct: 85 RLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGS----QYLLNWCVQIAKGMNYLED 139
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAK 241
+VHRD+ N+L+ K++DFG AK+LG EE + + + I +M E + +
Sbjct: 140 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 199
Query: 242 LTCASDIYSFGIVALQLLS 260
T SD++S+G+ +L++
Sbjct: 200 YTHQSDVWSYGVTVWELMT 218
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 102/199 (51%), Gaps = 15/199 (7%)
Query: 72 RFLGRGSAGLVYKGV-LPSGQ----VVAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV 123
+ L G+ G VYKG+ +P G+ VAIK + ++ + + E ++ V +P++
Sbjct: 21 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLL-RKDSVLTWERRVKILRDCALALRYLHHYID 182
L G C+ Q L+ + G L ++ KD++ + +L C + +++ D
Sbjct: 81 RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGS----QYLLNWCVQIAKGMNYLED 135
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAK 241
+VHRD+ N+L+ K++DFGLAK+LG EE + + + I +M E + +
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 242 LTCASDIYSFGIVALQLLS 260
T SD++S+G+ +L++
Sbjct: 196 YTHQSDVWSYGVTVWELMT 214
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 102/199 (51%), Gaps = 15/199 (7%)
Query: 72 RFLGRGSAGLVYKGV-LPSGQ----VVAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV 123
+ LG G+ G VYKG+ +P G+ VAI + ++ + + E ++ V +P++
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVC 114
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLL-RKDSVLTWERRVKILRDCALALRYLHHYID 182
L G C+ Q L+ + G L ++ KD++ + +L C + +++ D
Sbjct: 115 RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGS----QYLLNWCVQIAKGMNYLED 169
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAK 241
+VHRD+ N+L+ K++DFGLAK+LG EE + + + I +M E + +
Sbjct: 170 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 229
Query: 242 LTCASDIYSFGIVALQLLS 260
T SD++S+G+ +L++
Sbjct: 230 YTHQSDVWSYGVTVWELMT 248
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 30/212 (14%)
Query: 74 LGRGSAGLVY----KGVLPSGQ--VVAIKHIYKSNNT--DSFSREVEGLSRVRHPNLVCL 125
LG G+ G V+ +LP +VA+K + +++ + F RE E L+ ++H ++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRK--------------DSVLTWERRVKILRDCA 171
FG C EG +V+E+ G+L + L L + + + A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 172 LALRYLH--HYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAK-MLGMEESKVFTDVRGT 228
+ YL H+ VHRD+ N L+ + L K+ DFG+++ + + +V
Sbjct: 146 AGMVYLAGLHF-----VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 200
Query: 229 IGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
I +M PE + K T SD++SFG+V ++ +
Sbjct: 201 IRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 102/199 (51%), Gaps = 15/199 (7%)
Query: 72 RFLGRGSAGLVYKGV-LPSGQ----VVAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV 123
+ LG G+ G VYKG+ +P G+ VAIK + ++ + + E ++ V +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLL-RKDSVLTWERRVKILRDCALALRYLHHYID 182
L G C+ Q L+ + G L ++ KD++ + +L C + +++ D
Sbjct: 83 RLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGS----QYLLNWCVQIAKGMNYLED 137
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAK 241
+VHRD+ N+L+ K++DFG AK+LG EE + + + I +M E + +
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 242 LTCASDIYSFGIVALQLLS 260
T SD++S+G+ +L++
Sbjct: 198 YTHQSDVWSYGVTVWELMT 216
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 10/161 (6%)
Query: 105 DSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRV 164
+ REV L +V H N++ L + L+ E + G L L +K+S L+ E
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEAT 118
Query: 165 KILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP----KLSDFGLAKMLGMEESK 220
++ + YLH I H D+K NI+L +K P KL DFGLA + E+
Sbjct: 119 SFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGV 173
Query: 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
F ++ GT ++ PE + L +D++S G++ LLSG
Sbjct: 174 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 102/199 (51%), Gaps = 15/199 (7%)
Query: 72 RFLGRGSAGLVYKGV-LPSGQ----VVAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV 123
+ LG G+ G VYKG+ +P G+ VAIK + ++ + + E ++ V +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLL-RKDSVLTWERRVKILRDCALALRYLHHYID 182
L G C+ Q L+ + G L ++ KD++ + +L C + +++ D
Sbjct: 83 RLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGS----QYLLNWCVQIAKGMNYLED 137
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAK 241
+VHRD+ N+L+ K++DFG AK+LG EE + + + I +M E + +
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 242 LTCASDIYSFGIVALQLLS 260
T SD++S+G+ +L++
Sbjct: 198 YTHQSDVWSYGVTVWELMT 216
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 30/212 (14%)
Query: 74 LGRGSAGLVY----KGVLPSGQ--VVAIKHIYKSNNT--DSFSREVEGLSRVRHPNLVCL 125
LG G+ G V+ +LP +VA+K + +++ + F RE E L+ ++H ++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRK--------------DSVLTWERRVKILRDCA 171
FG C EG +V+E+ G+L + L L + + + A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 172 LALRYLH--HYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAK-MLGMEESKVFTDVRGT 228
+ YL H+ VHRD+ N L+ + L K+ DFG+++ + + +V
Sbjct: 140 AGMVYLAGLHF-----VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 194
Query: 229 IGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
I +M PE + K T SD++SFG+V ++ +
Sbjct: 195 IRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 31/215 (14%)
Query: 74 LGRGSAGLVYK----GVLPS--GQVVAIKHIYKS---NNTDSFSREVEGLSRV-RHPNLV 123
LG G+ G V + G++ S VA+K + S ++ E++ LS + H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLLRK-DSVLTWERRVKILR-------------- 168
L G C GG ++ E+C G+L L RK DS + + I+
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 169 --DCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT-DV 225
A + +L CI HRD+ NILLT K+ DFGLA+ + + + V +
Sbjct: 174 SYQVAKGMAFLAS--KNCI-HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 226 RGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
R + +M PE + N T SD++S+GI +L S
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 31/215 (14%)
Query: 74 LGRGSAGLVYK----GVLPS--GQVVAIKHIYKS---NNTDSFSREVEGLSRV-RHPNLV 123
LG G+ G V + G++ S VA+K + S ++ E++ LS + H N+V
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLLRK-DSVLTWERRVKILR-------------- 168
L G C GG ++ E+C G+L L RK DS + + I+
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 169 --DCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT-DV 225
A + +L CI HRD+ NILLT K+ DFGLA+ + + + V +
Sbjct: 169 SYQVAKGMAFLAS--KNCI-HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 226 RGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
R + +M PE + N T SD++S+GI +L S
Sbjct: 226 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 92/201 (45%), Gaps = 13/201 (6%)
Query: 72 RFLGRGSAGLVYKGVLPSGQ-VVAIKHIYKSN-----NTDSFSREVEGLSRVRHPNLVCL 125
R LG+G G VY +VA+K ++KS RE+E + + HPN++ L
Sbjct: 29 RPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRL 88
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
+ + YL+ E+ G L + L +K +R I+ + A AL Y H +
Sbjct: 89 YNYFYDRRRIYLILEYAPRGELYKEL-QKSCTFDEQRTATIMEELADALMYCH---GKKV 144
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
+HRDIK N+LL K E K++DFG + K GT+ Y+ PE +
Sbjct: 145 IHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMC---GTLDYLPPEMIEGRMHNEK 201
Query: 246 SDIYSFGIVALQLLSGQKVIE 266
D++ G++ +LL G E
Sbjct: 202 VDLWCIGVLCYELLVGNPPFE 222
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 102/199 (51%), Gaps = 15/199 (7%)
Query: 72 RFLGRGSAGLVYKGV-LPSGQ----VVAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV 123
+ L G+ G VYKG+ +P G+ VAIK + ++ + + E ++ V +P++
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLL-RKDSVLTWERRVKILRDCALALRYLHHYID 182
L G C+ Q L+ + G L ++ KD++ + +L C + +++ D
Sbjct: 88 RLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGS----QYLLNWCVQIAKGMNYLED 142
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAK 241
+VHRD+ N+L+ K++DFGLAK+LG EE + + + I +M E + +
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 202
Query: 242 LTCASDIYSFGIVALQLLS 260
T SD++S+G+ +L++
Sbjct: 203 YTHQSDVWSYGVTVWELMT 221
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 32/215 (14%)
Query: 74 LGRGSAGLVYKG------VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRV-----RHPNL 122
LGRG+ G V + + + VA+K + K T S R + ++ H N+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVK-MLKEGATHSEHRALMSELKILIHIGHHLNV 84
Query: 123 VCLFGCCVE-GGEQYLVYEFCAAGNLAQHLLRKDS---------------VLTWERRVKI 166
V L G C + GG ++ EFC GNL+ +L K + LT E +
Sbjct: 85 VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 167 LRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT-DV 225
A + +L CI HRD+ NILL+EK K+ DFGLA+ + + V D
Sbjct: 145 SFQVAKGMEFLAS--RKCI-HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 226 RGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
R + +M PE + + T SD++SFG++ ++ S
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 32/215 (14%)
Query: 74 LGRGSAGLVYKG------VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRV-----RHPNL 122
LGRG+ G V + + + VA+K + K T S R + ++ H N+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVK-MLKEGATHSEHRALMSELKILIHIGHHLNV 93
Query: 123 VCLFGCCVE-GGEQYLVYEFCAAGNLAQHLLRKDS---------------VLTWERRVKI 166
V L G C + GG ++ EFC GNL+ +L K + LT E +
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 167 LRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT-DV 225
A + +L CI HRD+ NILL+EK K+ DFGLA+ + + V D
Sbjct: 154 SFQVAKGMEFLASR--KCI-HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 226 RGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
R + +M PE + + T SD++SFG++ ++ S
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 87/193 (45%), Gaps = 17/193 (8%)
Query: 77 GSAGLVYKG------VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCV 130
G G VYK VL + +V+ K + + E++ L+ HPN+V L
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPNIVKLLDAFY 77
Query: 131 EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDI 190
+++ EFCA G + +L + LT + + + AL YLH D I+HRD+
Sbjct: 78 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDL 134
Query: 191 KLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMT-----NAKLTCA 245
K NIL T + KL+DFG++ + GT +M PE + +
Sbjct: 135 KAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYK 194
Query: 246 SDIYSFGIVALQL 258
+D++S GI +++
Sbjct: 195 ADVWSLGITLIEM 207
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 102/199 (51%), Gaps = 15/199 (7%)
Query: 72 RFLGRGSAGLVYKGV-LPSGQ----VVAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV 123
+ LG G+ G VYKG+ +P G+ VAIK + ++ + + E ++ V +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLL-RKDSVLTWERRVKILRDCALALRYLHHYID 182
L G C+ Q L+ + G L ++ KD++ + +L C + +++ D
Sbjct: 83 RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGS----QYLLNWCVQIAKGMNYLED 137
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAK 241
+VHRD+ N+L+ K++DFG AK+LG EE + + + I +M E + +
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 242 LTCASDIYSFGIVALQLLS 260
T SD++S+G+ +L++
Sbjct: 198 YTHQSDVWSYGVTVWELMT 216
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 36/228 (15%)
Query: 66 NNDWDRRFLGRGSAGLVYK----GVLP--SGQVVAIKHIYKSNNTD---SFSREVEGLSR 116
NN R +G G+ G V++ G+LP +VA+K + + + D F RE ++
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 117 VRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHL--LRKDSV----------------- 157
+PN+V L G C G L++E+ A G+L + L + +V
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 158 ----LTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAK- 212
L+ ++ I R A + YL + VHRD+ N L+ E + K++DFGL++
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRN 223
Query: 213 MLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
+ + K + I +M PE + + T SD++++G+V ++ S
Sbjct: 224 IYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNN--TD-----SFSREVEGLSRVRHPNLVCLF 126
+GRG G VY G L I KS N TD F E + HPN++ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 127 GCCVEG-GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
G C+ G +V + G+L + + T + + A ++YL
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKF 153
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAK-MLGMEESKVF--TDVRGTIGYMDPEYMTNAKL 242
VHRD+ N +L EK K++DFGLA+ M E V T + + +M E + K
Sbjct: 154 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKF 213
Query: 243 TCASDIYSFGIVALQLLS 260
T SD++SFG++ +L++
Sbjct: 214 TTKSDVWSFGVLLWELMT 231
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 10/161 (6%)
Query: 105 DSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRV 164
+ REV L +V H N++ L + L+ E + G L L +K+S L+ E
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEAT 118
Query: 165 KILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP----KLSDFGLAKMLGMEESK 220
++ + YLH I H D+K NI+L +K P KL DFGLA + E+
Sbjct: 119 SFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGV 173
Query: 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
F ++ GT ++ PE + L +D++S G++ LLSG
Sbjct: 174 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 90/200 (45%), Gaps = 20/200 (10%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVR---HPNLVCL 125
+G G+ G VYK P SG VA+K + N + REV L R+ HPN+V L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 126 FGCCVEGGEQ-----YLVYEFCAAGNLAQHLLRKDSV-LTWERRVKILRDCALALRYLHH 179
C LV+E +L +L + L E ++R L +LH
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH- 129
Query: 180 YIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
CIVHRD+K NIL+T KL+DFGLA++ + + V T+ Y PE +
Sbjct: 130 --ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LAPVVVTLWYRAPEVLLQ 185
Query: 240 AKLTCASDIYSFGIVALQLL 259
+ D++S G + ++
Sbjct: 186 STYATPVDMWSVGCIFAEMF 205
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 83/190 (43%), Gaps = 15/190 (7%)
Query: 89 SGQVVAIKHIYKSN-NTDSFS---REVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAA 144
+G+ VA+K I K+ N+ S REV + HPN+V LF YLV E+ +
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASG 97
Query: 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPK 204
G + +L+ E R K R A++Y H IVHRD+K N+LL K
Sbjct: 98 GEVFDYLVAHGRXKEKEARAK-FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADXNIK 153
Query: 205 LSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCAS-DIYSFGIVALQLLSGQK 263
++DFG + G Y PE K D++S G++ L+SG
Sbjct: 154 IADFGFSNEFTF--GNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS- 210
Query: 264 VIELDFDARD 273
L FD ++
Sbjct: 211 ---LPFDGQN 217
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 102/199 (51%), Gaps = 15/199 (7%)
Query: 72 RFLGRGSAGLVYKGV-LPSGQ----VVAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV 123
+ LG G+ G VYKG+ +P G+ VAIK + ++ + + E ++ V +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLL-RKDSVLTWERRVKILRDCALALRYLHHYID 182
L G C+ Q L+ + G L ++ KD++ + +L C + +++ D
Sbjct: 81 RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGS----QYLLNWCVQIAKGMNYLED 135
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAK 241
+VHRD+ N+L+ K++DFG AK+LG EE + + + I +M E + +
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 242 LTCASDIYSFGIVALQLLS 260
T SD++S+G+ +L++
Sbjct: 196 YTHQSDVWSYGVTVWELMT 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 10/161 (6%)
Query: 105 DSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRV 164
+ REV L +V H N++ L + L+ E + G L L +K+S L+ E
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEAT 118
Query: 165 KILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP----KLSDFGLAKMLGMEESK 220
++ + YLH I H D+K NI+L +K P KL DFGLA + E+
Sbjct: 119 SFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGV 173
Query: 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
F ++ GT ++ PE + L +D++S G++ LLSG
Sbjct: 174 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 10/161 (6%)
Query: 105 DSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRV 164
+ REV L +V H N++ L + L+ E + G L L +K+S L+ E
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEAT 118
Query: 165 KILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP----KLSDFGLAKMLGMEESK 220
++ + YLH I H D+K NI+L +K P KL DFGLA +E+
Sbjct: 119 SFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGV 173
Query: 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
F ++ GT ++ PE + L +D++S G++ LLSG
Sbjct: 174 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 31/215 (14%)
Query: 74 LGRGSAGLVYK----GVLPS--GQVVAIKHIYKSNNT---DSFSREVEGLSRV-RHPNLV 123
LG G+ G V + G++ S VA+K + S + ++ E++ LS + H N+V
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLLRK-DSVLTWERRVKILR-------------- 168
L G C GG ++ E+C G+L L RK DS + + I+
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 169 --DCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT-DV 225
A + +L CI HRD+ NILLT K+ DFGLA+ + + + V +
Sbjct: 151 SYQVAKGMAFLAS--KNCI-HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 226 RGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
R + +M PE + N T SD++S+GI +L S
Sbjct: 208 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 74 LGRGSAGLVYKGV--LPSGQVVAIKHIYKSNNTDSFSR-----EVEGLSRVRHPNLVCLF 126
LG G+ G V KG + I K+ D + E + ++ +P +V +
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 127 GCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIV 186
G C E LV E G L ++L + V + ++++ ++ ++YL + V
Sbjct: 95 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLE---ESNFV 149
Query: 187 HRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES--KVFTDVRGTIGYMDPEYMTNAKLTC 244
HRD+ N+LL + K+SDFGL+K L +E+ K T + + + PE + K +
Sbjct: 150 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 209
Query: 245 ASDIYSFGIVALQLLS-GQK 263
SD++SFG++ + S GQK
Sbjct: 210 KSDVWSFGVLMWEAFSYGQK 229
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 74 LGRGSAGLVYKGV--LPSGQVVAIKHIYKSNNTDSFSR-----EVEGLSRVRHPNLVCLF 126
LG G+ G V KG + I K+ D + E + ++ +P +V +
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 127 GCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIV 186
G C E LV E G L ++L + V + ++++ ++ ++YL + V
Sbjct: 95 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLE---ESNFV 149
Query: 187 HRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES--KVFTDVRGTIGYMDPEYMTNAKLTC 244
HRD+ N+LL + K+SDFGL+K L +E+ K T + + + PE + K +
Sbjct: 150 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 209
Query: 245 ASDIYSFGIVALQLLS-GQK 263
SD++SFG++ + S GQK
Sbjct: 210 KSDVWSFGVLMWEAFSYGQK 229
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 102/199 (51%), Gaps = 15/199 (7%)
Query: 72 RFLGRGSAGLVYKGV-LPSGQ----VVAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV 123
+ L G+ G VYKG+ +P G+ VAIK + ++ + + E ++ V +P++
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLL-RKDSVLTWERRVKILRDCALALRYLHHYID 182
L G C+ Q L+ + G L ++ KD++ + +L C + +++ D
Sbjct: 88 RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGS----QYLLNWCVQIAKGMNYLED 142
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAK 241
+VHRD+ N+L+ K++DFGLAK+LG EE + + + I +M E + +
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 202
Query: 242 LTCASDIYSFGIVALQLLS 260
T SD++S+G+ +L++
Sbjct: 203 YTHQSDVWSYGVTVWELMT 221
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 74 LGRGSAGLVYKGV--LPSGQVVAIKHIYKSNNTDSFSR-----EVEGLSRVRHPNLVCLF 126
LG G+ G V KG + I K+ D + E + ++ +P +V +
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 127 GCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIV 186
G C E LV E G L ++L + V + ++++ ++ ++YL + V
Sbjct: 85 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLE---ESNFV 139
Query: 187 HRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES--KVFTDVRGTIGYMDPEYMTNAKLTC 244
HRD+ N+LL + K+SDFGL+K L +E+ K T + + + PE + K +
Sbjct: 140 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 199
Query: 245 ASDIYSFGIVALQLLS-GQK 263
SD++SFG++ + S GQK
Sbjct: 200 KSDVWSFGVLMWEAFSYGQK 219
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 102/199 (51%), Gaps = 15/199 (7%)
Query: 72 RFLGRGSAGLVYKGV-LPSGQ----VVAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV 123
+ LG G+ G VYKG+ +P G+ VAIK + ++ + + E ++ V +P++
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLL-RKDSVLTWERRVKILRDCALALRYLHHYID 182
L G C+ Q L+ + G L ++ KD++ + +L C + +++ D
Sbjct: 88 RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGS----QYLLNWCVQIAKGMNYLED 142
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAK 241
+VHRD+ N+L+ K++DFG AK+LG EE + + + I +M E + +
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 202
Query: 242 LTCASDIYSFGIVALQLLS 260
T SD++S+G+ +L++
Sbjct: 203 YTHQSDVWSYGVTVWELMT 221
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 30/212 (14%)
Query: 74 LGRGSAGLVY----KGVLPSGQ--VVAIKHIYKSNNT--DSFSREVEGLSRVRHPNLVCL 125
LG G+ G V+ +LP +VA+K + +++ + F RE E L+ ++H ++V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRK--------------DSVLTWERRVKILRDCA 171
FG C EG +V+E+ G+L + L L + + + A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 172 LALRYLH--HYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAK-MLGMEESKVFTDVRGT 228
+ YL H+ VHRD+ N L+ + L K+ DFG+++ + + +V
Sbjct: 169 AGMVYLAGLHF-----VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 223
Query: 229 IGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
I +M PE + K T SD++SFG+V ++ +
Sbjct: 224 IRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 110/220 (50%), Gaps = 35/220 (15%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIKHIYKS--NNTDSFS--REVEGLSRVR-HPNLVCLFG 127
LG+G+ G+V+K + +G+VVA+K I+ + N+TD+ RE+ L+ + H N+V L
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 128 CCVEGGEQ--YLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
++ YLV+++ H + + ++L + ++ ++YLH G +
Sbjct: 77 VLRADNDRDVYLVFDYMETD---LHAVIRANILEPVHKQYVVYQLIKVIKYLH---SGGL 130
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKM------------LGMEES--------KVFTDV 225
+HRD+K +NILL + K++DFGL++ L + E+ + TD
Sbjct: 131 LHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDY 190
Query: 226 RGTIGYMDPEYMT-NAKLTCASDIYSFGIVALQLLSGQKV 264
T Y PE + + K T D++S G + ++L G+ +
Sbjct: 191 VATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPI 230
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 74 LGRGSAGLVYKGV--LPSGQVVAIKHIYKSNNTDSFSR-----EVEGLSRVRHPNLVCLF 126
LG G+ G V KG + I K+ D + E + ++ +P +V +
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 127 GCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIV 186
G C E LV E G L ++L + V + ++++ ++ ++YL + V
Sbjct: 79 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLE---ESNFV 133
Query: 187 HRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES--KVFTDVRGTIGYMDPEYMTNAKLTC 244
HRD+ N+LL + K+SDFGL+K L +E+ K T + + + PE + K +
Sbjct: 134 HRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSS 193
Query: 245 ASDIYSFGIVALQLLS-GQK 263
SD++SFG++ + S GQK
Sbjct: 194 KSDVWSFGVLMWEAFSYGQK 213
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 86/190 (45%), Gaps = 15/190 (7%)
Query: 89 SGQVVAIKHIYKSN-NTDSFS---REVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAA 144
+G+ VAIK I K+ N S REV + + HPN+V LF YL+ E+ +
Sbjct: 39 TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASG 98
Query: 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPK 204
G + +L+ + E R K R A++Y H IVHRD+K N+LL + K
Sbjct: 99 GEVFDYLVAHGRMKEKEARSK-FRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIK 154
Query: 205 LSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCAS-DIYSFGIVALQLLSGQK 263
++DFG + + G Y PE K D++S G++ L+SG
Sbjct: 155 IADFGFSNEFTV--GGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS- 211
Query: 264 VIELDFDARD 273
L FD ++
Sbjct: 212 ---LPFDGQN 218
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 74 LGRGSAGLVYKGV--LPSGQVVAIKHIYKSNNTDSFSR-----EVEGLSRVRHPNLVCLF 126
LG G+ G V KG + I K+ D + E + ++ +P +V +
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 127 GCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIV 186
G C E LV E G L ++L + V + ++++ ++ ++YL + V
Sbjct: 75 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLE---ESNFV 129
Query: 187 HRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES--KVFTDVRGTIGYMDPEYMTNAKLTC 244
HRD+ N+LL + K+SDFGL+K L +E+ K T + + + PE + K +
Sbjct: 130 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 189
Query: 245 ASDIYSFGIVALQLLS-GQK 263
SD++SFG++ + S GQK
Sbjct: 190 KSDVWSFGVLMWEAFSYGQK 209
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 74 LGRGSAGLVYKGV--LPSGQVVAIKHIYKSNNTDSFSR-----EVEGLSRVRHPNLVCLF 126
LG G+ G V KG + I K+ D + E + ++ +P +V +
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 127 GCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIV 186
G C E LV E G L ++L + V + ++++ ++ ++YL + V
Sbjct: 79 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLE---ESNFV 133
Query: 187 HRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES--KVFTDVRGTIGYMDPEYMTNAKLTC 244
HRD+ N+LL + K+SDFGL+K L +E+ K T + + + PE + K +
Sbjct: 134 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 193
Query: 245 ASDIYSFGIVALQLLS-GQK 263
SD++SFG++ + S GQK
Sbjct: 194 KSDVWSFGVLMWEAFSYGQK 213
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNN--TD-----SFSREVEGLSRVRHPNLVCLF 126
+GRG G VY G L I KS N TD F E + HPN++ L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 127 GCCVEG-GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
G C+ G +V + G+L + + T + + A +++L
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKF 155
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAK-MLGMEESKVF--TDVRGTIGYMDPEYMTNAKL 242
VHRD+ N +L EK K++DFGLA+ ML E V T + + +M E + K
Sbjct: 156 VHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKF 215
Query: 243 TCASDIYSFGIVALQLLS 260
T SD++SFG++ +L++
Sbjct: 216 TTKSDVWSFGVLLWELMT 233
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 74 LGRGSAGLVYKGV--LPSGQVVAIKHIYKSNNTDSFSR-----EVEGLSRVRHPNLVCLF 126
LG G+ G V KG + I K+ D + E + ++ +P +V +
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 127 GCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIV 186
G C E LV E G L ++L + V + ++++ ++ ++YL + V
Sbjct: 93 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLE---ESNFV 147
Query: 187 HRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES--KVFTDVRGTIGYMDPEYMTNAKLTC 244
HRD+ N+LL + K+SDFGL+K L +E+ K T + + + PE + K +
Sbjct: 148 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 207
Query: 245 ASDIYSFGIVALQLLS-GQK 263
SD++SFG++ + S GQK
Sbjct: 208 KSDVWSFGVLMWEAFSYGQK 227
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 26/212 (12%)
Query: 74 LGRGSAGLVYKG------VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRV-----RHPNL 122
LGRG+ G V + + + VA+K + K T S R + ++ H N+
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVK-MLKEGATHSEHRALMSELKILIHIGHHLNV 95
Query: 123 VCLFGCCVE-GGEQYLVYEFCAAGNLAQHLL-RKDSVLTWERRVKILRDCALALRYLHHY 180
V L G C + GG ++ EFC GNL+ +L +++ + ++ + L L L +L Y
Sbjct: 96 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICY 155
Query: 181 -----------IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT-DVRGT 228
+HRD+ NILL+EK K+ DFGLA+ + + V D R
Sbjct: 156 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 215
Query: 229 IGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
+ +M PE + + T SD++SFG++ ++ S
Sbjct: 216 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 90/200 (45%), Gaps = 20/200 (10%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVR---HPNLVCL 125
+G G+ G VYK P SG VA+K + N + REV L R+ HPN+V L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 126 FGCCVEGGEQ-----YLVYEFCAAGNLAQHLLRKDSV-LTWERRVKILRDCALALRYLHH 179
C LV+E +L +L + L E ++R L +LH
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA 130
Query: 180 YIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
CIVHRD+K NIL+T KL+DFGLA++ + + V T+ Y PE +
Sbjct: 131 ---NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LDPVVVTLWYRAPEVLLQ 185
Query: 240 AKLTCASDIYSFGIVALQLL 259
+ D++S G + ++
Sbjct: 186 STYATPVDMWSVGCIFAEMF 205
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 32/215 (14%)
Query: 74 LGRGSAGLVYKG------VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRV-----RHPNL 122
LGRG+ G V + + + VA+K + K T S R + ++ H N+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVK-MLKEGATHSEHRALMSELKILIHIGHHLNV 93
Query: 123 VCLFGCCVE-GGEQYLVYEFCAAGNLAQHLLRKDS---------------VLTWERRVKI 166
V L G C + GG ++ EFC GNL+ +L K + LT E +
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 167 LRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT-DV 225
A + +L CI HRD+ NILL+EK K+ DFGLA+ + + V D
Sbjct: 154 SFQVAKGMEFLASR--KCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDA 210
Query: 226 RGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
R + +M PE + + T SD++SFG++ ++ S
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 74 LGRGSAGLVYKGV--LPSGQVVAIKHIYKSNNTDSFSR-----EVEGLSRVRHPNLVCLF 126
LG G+ G V KG + I K+ D + E + ++ +P +V +
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 127 GCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIV 186
G C E LV E G L ++L + V + ++++ ++ ++YL + V
Sbjct: 73 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLE---ESNFV 127
Query: 187 HRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES--KVFTDVRGTIGYMDPEYMTNAKLTC 244
HRD+ N+LL + K+SDFGL+K L +E+ K T + + + PE + K +
Sbjct: 128 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 187
Query: 245 ASDIYSFGIVALQLLS-GQK 263
SD++SFG++ + S GQK
Sbjct: 188 KSDVWSFGVLMWEAFSYGQK 207
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTD-------SFSREVEGLSRVR---HPNL 122
+G G+ G VYK P SG VA+K + N S REV L R+ HPN+
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76
Query: 123 VCLFGCCVEGGEQ-----YLVYEFCAAGNLAQHLLRKDSV-LTWERRVKILRDCALALRY 176
V L C LV+E +L +L + L E ++R L +
Sbjct: 77 VRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 135
Query: 177 LHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEY 236
LH CIVHRD+K NIL+T KL+DFGLA++ + + T V T+ Y PE
Sbjct: 136 LH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LTPVVVTLWYRAPEV 190
Query: 237 MTNAKLTCASDIYSFGIVALQLL 259
+ + D++S G + ++
Sbjct: 191 LLQSTYATPVDMWSVGCIFAEMF 213
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 103/222 (46%), Gaps = 29/222 (13%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G+VYK +G+VVA+K I T+ RE+ L + HPN+V L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 129 CVEGGEQYLVYEFCAAGNLAQHL--LRKDSVLTWERRVKILRDCALALRYLHHYIDGC-- 184
+ YLV+E ++ Q L S LT L YL + G
Sbjct: 70 IHTENKLYLVFE-----HVHQDLKTFMDASALTG-------IPLPLIKSYLFQLLQGLAF 117
Query: 185 -----IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
++HRD+K N+L+ + KL+DFGLA+ G+ + +T T+ Y PE +
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLG 176
Query: 240 AK-LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
K + A DI+S G + ++++ + + D + DQL R R
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFR 217
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 90/200 (45%), Gaps = 20/200 (10%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVR---HPNLVCL 125
+G G+ G VYK P SG VA+K + N + REV L R+ HPN+V L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 126 FGCCVEGGEQ-----YLVYEFCAAGNLAQHLLRKDSV-LTWERRVKILRDCALALRYLHH 179
C LV+E +L +L + L E ++R L +LH
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH- 129
Query: 180 YIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
CIVHRD+K NIL+T KL+DFGLA++ + + V T+ Y PE +
Sbjct: 130 --ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LFPVVVTLWYRAPEVLLQ 185
Query: 240 AKLTCASDIYSFGIVALQLL 259
+ D++S G + ++
Sbjct: 186 STYATPVDMWSVGCIFAEMF 205
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 32/215 (14%)
Query: 74 LGRGSAGLVYKG------VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRV-----RHPNL 122
LGRG+ G V + + + VA+K + K T S R + ++ H N+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVK-MLKEGATHSEHRALMSELKILIHIGHHLNV 93
Query: 123 VCLFGCCVE-GGEQYLVYEFCAAGNLAQHLLRKDS---------------VLTWERRVKI 166
V L G C + GG ++ EFC GNL+ +L K + LT E +
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 167 LRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT-DV 225
A + +L CI HRD+ NILL+EK K+ DFGLA+ + + V D
Sbjct: 154 SFQVAKGMEFLAS--RKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 210
Query: 226 RGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
R + +M PE + + T SD++SFG++ ++ S
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 32/215 (14%)
Query: 74 LGRGSAGLVYKG------VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRV-----RHPNL 122
LGRG+ G V + + + VA+K + K T S R + ++ H N+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVK-MLKEGATHSEHRALMSELKILIHIGHHLNV 84
Query: 123 VCLFGCCVE-GGEQYLVYEFCAAGNLAQHLLRKDS---------------VLTWERRVKI 166
V L G C + GG ++ EFC GNL+ +L K + LT E +
Sbjct: 85 VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 167 LRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT-DV 225
A + +L CI HRD+ NILL+EK K+ DFGLA+ + + V D
Sbjct: 145 SFQVAKGMEFLAS--RKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 226 RGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
R + +M PE + + T SD++SFG++ ++ S
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNN--TD-----SFSREVEGLSRVRHPNLVCLF 126
+GRG G VY G L I KS N TD F E + HPN++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 127 GCCVEG-GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
G C+ G +V + G+L + + T + + A ++YL
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKF 154
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAK-MLGMEESKVF--TDVRGTIGYMDPEYMTNAKL 242
VHRD+ N +L EK K++DFGLA+ M E V T + + +M E + K
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 214
Query: 243 TCASDIYSFGIVALQLLS 260
T SD++SFG++ +L++
Sbjct: 215 TTKSDVWSFGVLLWELMT 232
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNN--TD-----SFSREVEGLSRVRHPNLVCLF 126
+GRG G VY G L I KS N TD F E + HPN++ L
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 127 GCCVEG-GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
G C+ G +V + G+L + + T + + A ++YL
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKF 173
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAK-MLGMEESKVF--TDVRGTIGYMDPEYMTNAKL 242
VHRD+ N +L EK K++DFGLA+ M E V T + + +M E + K
Sbjct: 174 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 233
Query: 243 TCASDIYSFGIVALQLLS 260
T SD++SFG++ +L++
Sbjct: 234 TTKSDVWSFGVLLWELMT 251
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNN--TD-----SFSREVEGLSRVRHPNLVCLF 126
+GRG G VY G L I KS N TD F E + HPN++ L
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 127 GCCVEG-GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
G C+ G +V + G+L + + T + + A ++YL
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKF 151
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAK-MLGMEESKVF--TDVRGTIGYMDPEYMTNAKL 242
VHRD+ N +L EK K++DFGLA+ M E V T + + +M E + K
Sbjct: 152 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 211
Query: 243 TCASDIYSFGIVALQLLS 260
T SD++SFG++ +L++
Sbjct: 212 TTKSDVWSFGVLLWELMT 229
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNN--TD-----SFSREVEGLSRVRHPNLVCLF 126
+GRG G VY G L I KS N TD F E + HPN++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 127 GCCVEG-GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
G C+ G +V + G+L + + T + + A ++YL
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKF 154
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAK-MLGMEESKVF--TDVRGTIGYMDPEYMTNAKL 242
VHRD+ N +L EK K++DFGLA+ M E V T + + +M E + K
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 214
Query: 243 TCASDIYSFGIVALQLLS 260
T SD++SFG++ +L++
Sbjct: 215 TTKSDVWSFGVLLWELMT 232
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 32/215 (14%)
Query: 74 LGRGSAGLVYKG------VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRV-----RHPNL 122
LGRG+ G V + + + VA+K + K T S R + ++ H N+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVK-MLKEGATHSEHRALMSELKILIHIGHHLNV 84
Query: 123 VCLFGCCVE-GGEQYLVYEFCAAGNLAQHLLRKDS---------------VLTWERRVKI 166
V L G C + GG ++ EFC GNL+ +L K + LT E +
Sbjct: 85 VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 167 LRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT-DV 225
A + +L CI HRD+ NILL+EK K+ DFGLA+ + + V D
Sbjct: 145 SFQVAKGMEFLAS--RKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 226 RGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
R + +M PE + + T SD++SFG++ ++ S
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNN--TD-----SFSREVEGLSRVRHPNLVCLF 126
+GRG G VY G L I KS N TD F E + HPN++ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 127 GCCVEG-GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
G C+ G +V + G+L + + T + + A ++YL
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKF 153
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAK-MLGMEESKVF--TDVRGTIGYMDPEYMTNAKL 242
VHRD+ N +L EK K++DFGLA+ M E V T + + +M E + K
Sbjct: 154 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 213
Query: 243 TCASDIYSFGIVALQLLS 260
T SD++SFG++ +L++
Sbjct: 214 TTKSDVWSFGVLLWELMT 231
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 32/215 (14%)
Query: 74 LGRGSAGLVYKG------VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRV-----RHPNL 122
LGRG+ G V + + + VA+K + K T S R + ++ H N+
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVK-MLKEGATHSEHRALMSELKILIHIGHHLNV 130
Query: 123 VCLFGCCVE-GGEQYLVYEFCAAGNLAQHLLRKDS---------------VLTWERRVKI 166
V L G C + GG ++ EFC GNL+ +L K + LT E +
Sbjct: 131 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 190
Query: 167 LRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT-DV 225
A + +L CI HRD+ NILL+EK K+ DFGLA+ + + V D
Sbjct: 191 SFQVAKGMEFLAS--RKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 247
Query: 226 RGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
R + +M PE + + T SD++SFG++ ++ S
Sbjct: 248 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNN--TD-----SFSREVEGLSRVRHPNLVCLF 126
+GRG G VY G L I KS N TD F E + HPN++ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 127 GCCVEG-GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
G C+ G +V + G+L + + T + + A ++YL
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKF 152
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAK-MLGMEESKVF--TDVRGTIGYMDPEYMTNAKL 242
VHRD+ N +L EK K++DFGLA+ M E V T + + +M E + K
Sbjct: 153 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 212
Query: 243 TCASDIYSFGIVALQLLS 260
T SD++SFG++ +L++
Sbjct: 213 TTKSDVWSFGVLLWELMT 230
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNN--TD-----SFSREVEGLSRVRHPNLVCLF 126
+GRG G VY G L I KS N TD F E + HPN++ L
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 127 GCCVEG-GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
G C+ G +V + G+L + + T + + A ++YL
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKF 149
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAK-MLGMEESKVF--TDVRGTIGYMDPEYMTNAKL 242
VHRD+ N +L EK K++DFGLA+ M E V T + + +M E + K
Sbjct: 150 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 209
Query: 243 TCASDIYSFGIVALQLLS 260
T SD++SFG++ +L++
Sbjct: 210 TTKSDVWSFGVLLWELMT 227
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 121/265 (45%), Gaps = 31/265 (11%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTDSFSREVEGLS----RVRHPNLVCLFGC 128
LGRG+ G+V K +PSGQ+ A+K I + N+ R + L V P V +G
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGA 101
Query: 129 CVEGGEQYLVYEF--CAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIV 186
G+ ++ E + + ++ K + + KI AL +LH + ++
Sbjct: 102 LFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVI 159
Query: 187 HRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDV-RGTIGYMDPEYMT---NAK- 241
HRD+K +N+L+ + K DFG++ L + +K D+ G Y PE + N K
Sbjct: 160 HRDVKPSNVLINALGQVKXCDFGISGYLVDDVAK---DIDAGCKPYXAPERINPELNQKG 216
Query: 242 LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNI 301
+ SDI+S GI ++L ++ +D+ ++ + V + P P+L +
Sbjct: 217 YSVKSDIWSLGITXIEL----AILRFPYDSWGTPFQQLKQVV--EEP-----SPQLPADK 265
Query: 302 NRADFESILKIAVLCVAKSSKGRPT 326
A+F + C+ K+SK RPT
Sbjct: 266 FSAEF---VDFTSQCLKKNSKERPT 287
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 13/196 (6%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIKHI----YKSNNTDSFSREVEGLSRVRHPNLVCLFGC 128
LG+G+ +V + V + +GQ A K I + + RE ++HPN+V L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHR 188
E G YL+++ G L + ++ ++ + I + L + H +VHR
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQ----ILEAVLHCHQMGVVHR 145
Query: 189 DIKLTNILLTEKLEP---KLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
D+K N+LL KL+ KL+DFGLA + E+ F GT GY+ PE +
Sbjct: 146 DLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWF-GFAGTPGYLSPEVLRKDPYGKP 204
Query: 246 SDIYSFGIVALQLLSG 261
D+++ G++ LL G
Sbjct: 205 VDLWACGVILYILLVG 220
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 20/203 (9%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTDSFSREVEGLSR-------VRHPNLVCL 125
+G+G +V + + +GQ A+K + + T S E L R ++HP++V L
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLL-RKDSVLTWERRV--KILRDCALALRYLHHYID 182
G Y+V+EF +L ++ R D+ + V +R ALRY H D
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---D 148
Query: 183 GCIVHRDIKLTNILLTEKLEP---KLSDFGLAKMLGMEESKVFTDVR-GTIGYMDPEYMT 238
I+HRD+K +LL K KL FG+A LG ES + R GT +M PE +
Sbjct: 149 NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG--ESGLVAGGRVGTPHFMAPEVVK 206
Query: 239 NAKLTCASDIYSFGIVALQLLSG 261
D++ G++ LLSG
Sbjct: 207 REPYGKPVDVWGCGVILFILLSG 229
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNN--TD-----SFSREVEGLSRVRHPNLVCLF 126
+GRG G VY G L I KS N TD F E + HPN++ L
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 127 GCCVEG-GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
G C+ G +V + G+L + + T + + A ++YL
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKF 172
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAK-MLGMEESKVF--TDVRGTIGYMDPEYMTNAKL 242
VHRD+ N +L EK K++DFGLA+ M E V T + + +M E + K
Sbjct: 173 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 232
Query: 243 TCASDIYSFGIVALQLLS 260
T SD++SFG++ +L++
Sbjct: 233 TTKSDVWSFGVLLWELMT 250
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 115/269 (42%), Gaps = 30/269 (11%)
Query: 89 SGQVVAIKHIYKS--NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYL--VYEFCAA 144
+G +VA+K + S + F RE++ L + +V G G Q L V E+ +
Sbjct: 38 TGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPS 97
Query: 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPK 204
G L L R + L R + + YL VHRD+ NIL+ + K
Sbjct: 98 GCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVK 154
Query: 205 LSDFGLAKMLGMEESKVFTDVRG--TIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-- 260
++DFGLAK+L +++ G I + PE +++ + SD++SFG+V +L +
Sbjct: 155 IADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYC 214
Query: 261 ------GQKVIELDFDARD--QLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKI 312
+ + + RD L+R + G+R P A+ ++K
Sbjct: 215 DKSCSPSAEFLRMMGSERDVPALSRLLELLEEGQRLPAPPACP--------AEVHELMK- 265
Query: 313 AVLCVAKSSKGRPTIDVVYEEIDKAWKNT 341
LC A S + RP+ + ++D W +
Sbjct: 266 --LCWAPSPQDRPSFSALGPQLDMLWSGS 292
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 82/162 (50%), Gaps = 8/162 (4%)
Query: 105 DSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRV 164
D E + ++ +P +V + G C E LV E G L ++L + V + +
Sbjct: 415 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD-KNII 472
Query: 165 KILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES--KVF 222
+++ ++ ++YL + VHRD+ N+LL + K+SDFGL+K L +E+ K
Sbjct: 473 ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529
Query: 223 TDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQK 263
T + + + PE + K + SD++SFG++ + S GQK
Sbjct: 530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 571
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNN--TD-----SFSREVEGLSRVRHPNLVCLF 126
+GRG G VY G L I KS N TD F E + HPN++ L
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 127 GCCVEG-GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
G C+ G +V + G+L + + T + + A ++YL
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKF 146
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAK-MLGMEESKVF--TDVRGTIGYMDPEYMTNAKL 242
VHRD+ N +L EK K++DFGLA+ M E V T + + +M E + K
Sbjct: 147 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 206
Query: 243 TCASDIYSFGIVALQLLS 260
T SD++SFG++ +L++
Sbjct: 207 TTKSDVWSFGVLLWELMT 224
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 43/214 (20%)
Query: 73 FLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGC--- 128
+G G G V+K G+ IK + K NN + REV+ L+++ H N+V GC
Sbjct: 18 LIGSGGFGQVFKAKHRIDGKTYVIKRV-KYNNEKA-EREVKALAKLDHVNIVHYNGCWDG 75
Query: 129 ------------------CVEGGEQYLVYEFCAAGNLAQHLLRK-----DSVLTWERRVK 165
C+ ++ EFC G L Q + ++ D VL E
Sbjct: 76 FDYDPETSSKNSSRSKTKCL-----FIQMEFCDKGTLEQWIEKRRGEKLDKVLALE---- 126
Query: 166 ILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDV 225
+ + Y+H +++RD+K +NI L + + K+ DFGL L + + +
Sbjct: 127 LFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS-- 181
Query: 226 RGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLL 259
+GT+ YM PE +++ D+Y+ G++ +LL
Sbjct: 182 KGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 74 LGRGSAGLVYKGVLPSGQ-VVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LGRG+ +VY+ Q A+K + K+ + E+ L R+ HPN++ L
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETP 120
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKL 192
E LV E G L ++ K + ++ A+ YLH + IVHRD+K
Sbjct: 121 TEISLVLELVTGGELFDRIVEK-GYYSERDAADAVKQILEAVAYLH---ENGIVHRDLKP 176
Query: 193 TNILLTEKLEP---KLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIY 249
N+L K++DFGL+K+ +E + V GT GY PE + D++
Sbjct: 177 ENLLYATPAPDAPLKIADFGLSKI--VEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMW 234
Query: 250 SFGIVALQLLSGQKVIELDFDAR-DQL 275
S GI+ LL G E +D R DQ
Sbjct: 235 SVGIITYILLCG---FEPFYDERGDQF 258
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 82/162 (50%), Gaps = 8/162 (4%)
Query: 105 DSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRV 164
D E + ++ +P +V + G C E LV E G L ++L + V + +
Sbjct: 416 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD-KNII 473
Query: 165 KILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES--KVF 222
+++ ++ ++YL + VHRD+ N+LL + K+SDFGL+K L +E+ K
Sbjct: 474 ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 530
Query: 223 TDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQK 263
T + + + PE + K + SD++SFG++ + S GQK
Sbjct: 531 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 572
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 46/222 (20%)
Query: 73 FLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGC--- 128
+G G G V+K G+ I+ + K NN + REV+ L+++ H N+V GC
Sbjct: 19 LIGSGGFGQVFKAKHRIDGKTYVIRRV-KYNNEKA-EREVKALAKLDHVNIVHYNGCWDG 76
Query: 129 ----------CVEGGEQ----------------YLVYEFCAAGNLAQHLLRK-----DSV 157
+E + ++ EFC G L Q + ++ D V
Sbjct: 77 FDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKV 136
Query: 158 LTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217
L E + + Y+H ++HRD+K +NI L + + K+ DFGL L +
Sbjct: 137 LALE----LFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKND 189
Query: 218 ESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLL 259
+ T +GT+ YM PE +++ D+Y+ G++ +LL
Sbjct: 190 GKR--TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 91/194 (46%), Gaps = 13/194 (6%)
Query: 74 LGRGSAGLVYKGVLPSGQVV-AIKHI--YKSNNTDSFSREVEGLSRVRHPNLVCLFGCCV 130
+GRGS G V V ++ A K I Y + D F +E+E + + HPN++ L+
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFE 76
Query: 131 EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDI 190
+ + YLV E C G L + ++ K V +I++D A+ Y H + HRD+
Sbjct: 77 DNTDIYLVMELCTGGELFERVVHK-RVFRESDAARIMKDVLSAVAYCHKL---NVAHRDL 132
Query: 191 KLTNIL-LTEKLEP--KLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASD 247
K N L LT+ + KL DFGLA + K+ GT Y+ P+ + D
Sbjct: 133 KPENFLFLTDSPDSPLKLIDFGLAARF--KPGKMMRTKVGTPYYVSPQVL-EGLYGPECD 189
Query: 248 IYSFGIVALQLLSG 261
+S G++ LL G
Sbjct: 190 EWSAGVMMYVLLCG 203
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 99/222 (44%), Gaps = 29/222 (13%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G+VYK +G+VVA+K I T+ RE+ L + HPN+V L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALAL--RYLHHYIDGC-- 184
+ YLV+E D L L L L YL + G
Sbjct: 74 IHTENKLYLVFEHV------------DQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 185 -----IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
++HRD+K N+L+ + KL+DFGLA+ G+ +V T+ Y PE +
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLG 180
Query: 240 AK-LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
K + A DI+S G + ++++ + + D + DQL R R
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFR 221
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 20/203 (9%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTDSFSREVEGLSR-------VRHPNLVCL 125
+G+G +V + + +GQ A+K + + T S E L R ++HP++V L
Sbjct: 34 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 93
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLL-RKDSVLTWERRV--KILRDCALALRYLHHYID 182
G Y+V+EF +L ++ R D+ + V +R ALRY H D
Sbjct: 94 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---D 150
Query: 183 GCIVHRDIKLTNILLTEKLEP---KLSDFGLAKMLGMEESKVFTDVR-GTIGYMDPEYMT 238
I+HRD+K +LL K KL FG+A LG ES + R GT +M PE +
Sbjct: 151 NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG--ESGLVAGGRVGTPHFMAPEVVK 208
Query: 239 NAKLTCASDIYSFGIVALQLLSG 261
D++ G++ LLSG
Sbjct: 209 REPYGKPVDVWGCGVILFILLSG 231
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 91/194 (46%), Gaps = 13/194 (6%)
Query: 74 LGRGSAGLVYKGVLPSGQVV-AIKHI--YKSNNTDSFSREVEGLSRVRHPNLVCLFGCCV 130
+GRGS G V V ++ A K I Y + D F +E+E + + HPN++ L+
Sbjct: 34 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFE 93
Query: 131 EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDI 190
+ + YLV E C G L + ++ K V +I++D A+ Y H + HRD+
Sbjct: 94 DNTDIYLVMELCTGGELFERVVHK-RVFRESDAARIMKDVLSAVAYCHKL---NVAHRDL 149
Query: 191 KLTNIL-LTEKLEP--KLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASD 247
K N L LT+ + KL DFGLA + K+ GT Y+ P+ + D
Sbjct: 150 KPENFLFLTDSPDSPLKLIDFGLAARF--KPGKMMRTKVGTPYYVSPQVL-EGLYGPECD 206
Query: 248 IYSFGIVALQLLSG 261
+S G++ LL G
Sbjct: 207 EWSAGVMMYVLLCG 220
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 100/202 (49%), Gaps = 24/202 (11%)
Query: 74 LGRGSAG-LVYKGVLPSGQVVAIKHIYKSNNTDSFS-REVEGLSRV-RHPNLVCLFGCCV 130
LG G+ G +VY+G+ + VA+K I SF+ REV+ L HPN++ F C
Sbjct: 32 LGHGAEGTIVYRGMF-DNRDVAVKRILP--ECFSFADREVQLLRESDEHPNVIRYF--CT 86
Query: 131 EGGEQ--YLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHR 188
E Q Y+ E CAA L +++ +KD + +L+ L +LH IVHR
Sbjct: 87 EKDRQFQYIAIELCAA-TLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL---NIVHR 142
Query: 189 DIKLTNILLT-----EKLEPKLSDFGLAKML--GMEESKVFTDVRGTIGYMDPEYMTN-- 239
D+K NIL++ K++ +SDFGL K L G + V GT G++ PE ++
Sbjct: 143 DLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDC 202
Query: 240 -AKLTCASDIYSFGIVALQLLS 260
T DI+S G V ++S
Sbjct: 203 KENPTYTVDIFSAGCVFYYVIS 224
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 28/194 (14%)
Query: 93 VAIKHIYKSNNTD---SFSREVEGLSRV-RHPNLVCLFGCCVEGGEQYLVYEFCAAGNLA 148
VA+K + + + D + E++ +S + +H N+V L G C GG ++ E+C G+L
Sbjct: 64 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 123
Query: 149 QHLLRK------DSVLTWERRVKILRDCA--LALRYLHHYID------------GCIVHR 188
L RK S+ + + ++ L LR L H+ CI HR
Sbjct: 124 NFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCI-HR 182
Query: 189 DIKLTNILLTEKLEPKLSDFGLAKMLGMEESK--VFTDVRGTIGYMDPEYMTNAKLTCAS 246
D+ N+LLT K+ DFGLA+ + M +S V + R + +M PE + + T S
Sbjct: 183 DVAARNVLLTNGHVAKIGDFGLARDI-MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQS 241
Query: 247 DIYSFGIVALQLLS 260
D++S+GI+ ++ S
Sbjct: 242 DVWSYGILLWEIFS 255
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 13/160 (8%)
Query: 109 REVEGLSRVR-HPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKIL 167
RE L +V HP+++ L +LV++ G L +L K ++ E R I+
Sbjct: 148 RETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETR-SIM 206
Query: 168 RDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRG 227
R A+ +LH IVHRD+K NILL + ++ +LSDFG + L E + ++ G
Sbjct: 207 RSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHL--EPGEKLRELCG 261
Query: 228 TIGYMDPEYM------TNAKLTCASDIYSFGIVALQLLSG 261
T GY+ PE + T+ D+++ G++ LL+G
Sbjct: 262 TPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 91/192 (47%), Gaps = 9/192 (4%)
Query: 74 LGRGSAGLV-YKGVLPSGQVVAIK--HIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCV 130
+G GS G+V SG+ VA+K + K + EV + +H N+V ++ +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 131 EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDI 190
G E +++ EF G L + L E+ + AL YLH ++HRDI
Sbjct: 113 VGEELWVLMEFLQGGALTD--IVSQVRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDI 167
Query: 191 KLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYS 250
K +ILLT KLSDFG + + K V GT +M PE ++ + DI+S
Sbjct: 168 KSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLV-GTPYWMAPEVISRSLYATEVDIWS 226
Query: 251 FGIVALQLLSGQ 262
GI+ ++++ G+
Sbjct: 227 LGIMVIEMVDGE 238
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNN--TD-----SFSREVEGLSRVRHPNLVCLF 126
+GRG G VY G L I KS N TD F E + HPN++ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 127 GCCVEG-GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
G C+ G +V + G+L + + T + + A +++L
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKF 152
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAK-MLGMEESKVF--TDVRGTIGYMDPEYMTNAKL 242
VHRD+ N +L EK K++DFGLA+ M E V T + + +M E + K
Sbjct: 153 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 212
Query: 243 TCASDIYSFGIVALQLLS 260
T SD++SFG++ +L++
Sbjct: 213 TTKSDVWSFGVLLWELMT 230
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNN--TD-----SFSREVEGLSRVRHPNLVCLF 126
+GRG G VY G L I KS N TD F E + HPN++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 127 GCCVEG-GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
G C+ G +V + G+L + + T + + A +++L
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKF 154
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAK-MLGMEESKVF--TDVRGTIGYMDPEYMTNAKL 242
VHRD+ N +L EK K++DFGLA+ M E V T + + +M E + K
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 214
Query: 243 TCASDIYSFGIVALQLLS 260
T SD++SFG++ +L++
Sbjct: 215 TTKSDVWSFGVLLWELMT 232
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 113/264 (42%), Gaps = 27/264 (10%)
Query: 74 LGRGSAGLVYKGVL-PSGQVVAIKHIYKSNNTDSFSREVEGLSRVRH----PNLVCLFGC 128
+GRG+ G V K V PSGQ++A+K I + + + + L V P +V +G
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 129 CVEGGEQYLVYEFCAAG--NLAQHLLRK-DSVLTWERRVKILRDCALALRYLHHYIDGCI 185
G+ ++ E + +++ D V+ E KI AL +L + I
Sbjct: 90 LFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK--I 147
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYM----TNAK 241
+HRDIK +NILL KL DFG++ L +S T G YM PE + +
Sbjct: 148 IHRDIKPSNILLDRSGNIKLCDFGISGQL--VDSIAKTRDAGCRPYMAPERIDPSASRQG 205
Query: 242 LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNI 301
SD++S GI +L +G+ DQLT+ + + P+L+ +
Sbjct: 206 YDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKG-----------DPPQLSNSE 254
Query: 302 NRADFESILKIAVLCVAKSSKGRP 325
R S + LC+ K RP
Sbjct: 255 EREFSPSFINFVNLCLTKDESKRP 278
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 95/197 (48%), Gaps = 16/197 (8%)
Query: 74 LGRGSAGLVYK------GVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFG 127
LG+G+ +V + G+ + +++ K + + + RE +++HPN+V L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHD 72
Query: 128 CCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVH 187
E YLV++ G L + ++ ++ + ++ ++ Y H IVH
Sbjct: 73 SIQEESFHYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH---SNGIVH 128
Query: 188 RDIKLTNILLTEKLEP---KLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTC 244
R++K N+LL K + KL+DFGLA + + +S+ + GT GY+ PE + +
Sbjct: 129 RNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSK 186
Query: 245 ASDIYSFGIVALQLLSG 261
DI++ G++ LL G
Sbjct: 187 PVDIWACGVILYILLVG 203
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNN--TD-----SFSREVEGLSRVRHPNLVCLF 126
+GRG G VY G L I KS N TD F E + HPN++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 127 GCCVEG-GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
G C+ G +V + G+L + + T + + A +++L
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKF 154
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAK-MLGMEESKVF--TDVRGTIGYMDPEYMTNAKL 242
VHRD+ N +L EK K++DFGLA+ M E V T + + +M E + K
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 214
Query: 243 TCASDIYSFGIVALQLLS 260
T SD++SFG++ +L++
Sbjct: 215 TTKSDVWSFGVLLWELMT 232
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 95/197 (48%), Gaps = 16/197 (8%)
Query: 74 LGRGSAGLVYK------GVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFG 127
LG+G+ +V + G+ + +++ K + + + RE +++HPN+V L
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHD 71
Query: 128 CCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVH 187
E YLV++ G L + ++ ++ + ++ ++ Y H IVH
Sbjct: 72 SIQEESFHYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH---SNGIVH 127
Query: 188 RDIKLTNILLTEKLEP---KLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTC 244
R++K N+LL K + KL+DFGLA + + +S+ + GT GY+ PE + +
Sbjct: 128 RNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSK 185
Query: 245 ASDIYSFGIVALQLLSG 261
DI++ G++ LL G
Sbjct: 186 PVDIWACGVILYILLVG 202
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 91/189 (48%), Gaps = 6/189 (3%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYK-SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG G G V+ VA+K + S + ++F E + ++H LV L V
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLH-AVVTK 81
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG-CIVHRDIK 191
Y++ EF A G+L L + ++ + L D + + +I+ +HRD++
Sbjct: 82 EPIYIITEFMAKGSLLDFLKSDEGS---KQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLR 138
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
NIL++ L K++DFGLA+++ E + I + PE + T SD++SF
Sbjct: 139 AANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSF 198
Query: 252 GIVALQLLS 260
GI+ +++++
Sbjct: 199 GILLMEIVT 207
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 95/197 (48%), Gaps = 16/197 (8%)
Query: 74 LGRGSAGLVYK------GVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFG 127
LG+G+ +V + G+ + +++ K + + + RE +++HPN+V L
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHD 95
Query: 128 CCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVH 187
E YLV++ G L + ++ ++ + ++ ++ Y H IVH
Sbjct: 96 SIQEESFHYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH---SNGIVH 151
Query: 188 RDIKLTNILLTEKLEP---KLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTC 244
R++K N+LL K + KL+DFGLA + + +S+ + GT GY+ PE + +
Sbjct: 152 RNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSK 209
Query: 245 ASDIYSFGIVALQLLSG 261
DI++ G++ LL G
Sbjct: 210 PVDIWACGVILYILLVG 226
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNN--TD-----SFSREVEGLSRVRHPNLVCLF 126
+GRG G VY G L I KS N TD F E + HPN++ L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 127 GCCVEG-GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
G C+ G +V + G+L + + T + + A +++L
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKF 155
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAK-MLGMEESKVF--TDVRGTIGYMDPEYMTNAKL 242
VHRD+ N +L EK K++DFGLA+ M E V T + + +M E + K
Sbjct: 156 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 215
Query: 243 TCASDIYSFGIVALQLLS 260
T SD++SFG++ +L++
Sbjct: 216 TTKSDVWSFGVLLWELMT 233
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNN--TD-----SFSREVEGLSRVRHPNLVCLF 126
+GRG G VY G L I KS N TD F E + HPN++ L
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 127 GCCVEG-GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
G C+ G +V + G+L + + T + + A +++L
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKF 159
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAK-MLGMEESKVF--TDVRGTIGYMDPEYMTNAKL 242
VHRD+ N +L EK K++DFGLA+ M E V T + + +M E + K
Sbjct: 160 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 219
Query: 243 TCASDIYSFGIVALQLLS 260
T SD++SFG++ +L++
Sbjct: 220 TTKSDVWSFGVLLWELMT 237
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 115/269 (42%), Gaps = 30/269 (11%)
Query: 89 SGQVVAIKHIYKS--NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYL--VYEFCAA 144
+G +VA+K + S + F RE++ L + +V G G Q L V E+ +
Sbjct: 51 TGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPS 110
Query: 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPK 204
G L L R + L R + + YL VHRD+ NIL+ + K
Sbjct: 111 GCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVK 167
Query: 205 LSDFGLAKMLGMEESKVFTDVRG--TIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-- 260
++DFGLAK+L +++ G I + PE +++ + SD++SFG+V +L +
Sbjct: 168 IADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYC 227
Query: 261 ------GQKVIELDFDARD--QLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKI 312
+ + + RD L+R + G+R P A+ ++K
Sbjct: 228 DKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACP--------AEVHELMK- 278
Query: 313 AVLCVAKSSKGRPTIDVVYEEIDKAWKNT 341
LC A S + RP+ + ++D W +
Sbjct: 279 --LCWAPSPQDRPSFSALGPQLDMLWSGS 305
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 95/197 (48%), Gaps = 16/197 (8%)
Query: 74 LGRGSAGLVYK------GVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFG 127
LG+G+ +V + G+ + +++ K + + + RE +++HPN+V L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHD 72
Query: 128 CCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVH 187
E YLV++ G L + ++ ++ + ++ ++ Y H IVH
Sbjct: 73 SIQEESFHYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH---SNGIVH 128
Query: 188 RDIKLTNILLTEKLEP---KLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTC 244
R++K N+LL K + KL+DFGLA + + +S+ + GT GY+ PE + +
Sbjct: 129 RNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSK 186
Query: 245 ASDIYSFGIVALQLLSG 261
DI++ G++ LL G
Sbjct: 187 PVDIWACGVILYILLVG 203
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNN--TD-----SFSREVEGLSRVRHPNLVCLF 126
+GRG G VY G L I KS N TD F E + HPN++ L
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 127 GCCVEG-GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
G C+ G +V + G+L + + T + + A +++L
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKF 213
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAK-MLGMEESKVF--TDVRGTIGYMDPEYMTNAKL 242
VHRD+ N +L EK K++DFGLA+ M E V T + + +M E + K
Sbjct: 214 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 273
Query: 243 TCASDIYSFGIVALQLLS 260
T SD++SFG++ +L++
Sbjct: 274 TTKSDVWSFGVLLWELMT 291
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 12/203 (5%)
Query: 67 NDWDR-RFLGRGSAG-LVYKGVLPSGQVVAIKHIYKS-----NNTDSFSREVEGLSRVRH 119
ND+D + LG+G+ G ++ +G+ A+K + K + E L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 120 PNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHH 179
P L L V E+ G L HL R + V T ER + AL YLH
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR-ERVFTEERARFYGAEIVSALEYLH- 122
Query: 180 YIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
+V+RDIKL N++L + K++DFGL K G+ + GT Y+ PE + +
Sbjct: 123 --SRDVVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATMKTFCGTPEYLAPEVLED 179
Query: 240 AKLTCASDIYSFGIVALQLLSGQ 262
A D + G+V +++ G+
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 12/203 (5%)
Query: 67 NDWDR-RFLGRGSAG-LVYKGVLPSGQVVAIKHIYKS-----NNTDSFSREVEGLSRVRH 119
ND+D + LG+G+ G ++ +G+ A+K + K + E L RH
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 120 PNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHH 179
P L L V E+ G L HL R + V T ER + AL YLH
Sbjct: 68 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR-ERVFTEERARFYGAEIVSALEYLH- 125
Query: 180 YIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
+V+RDIKL N++L + K++DFGL K G+ + GT Y+ PE + +
Sbjct: 126 --SRDVVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATMKTFCGTPEYLAPEVLED 182
Query: 240 AKLTCASDIYSFGIVALQLLSGQ 262
A D + G+V +++ G+
Sbjct: 183 NDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 103/202 (50%), Gaps = 17/202 (8%)
Query: 74 LGRGSAGLVYKGVLPS----GQV----VAIKHIYKS--NNTDSFSREVEGLSRVRHPNLV 123
LG+G+ ++KGV GQ+ V +K + K+ N ++SF +S++ H +LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG 183
+G CV G E LV EF G+L +L + + + ++++ + A A+ +L +
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLE---EN 132
Query: 184 CIVHRDIKLTNILLTEKLEPKLSDFGLAKM--LGMEESKVFTDV-RGTIGYMDPEYMTNA 240
++H ++ NILL + + K + K+ G+ + + D+ + I ++ PE + N
Sbjct: 133 TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIENP 192
Query: 241 K-LTCASDIYSFGIVALQLLSG 261
K L A+D +SFG ++ SG
Sbjct: 193 KNLNLATDKWSFGTTLWEICSG 214
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 12/203 (5%)
Query: 67 NDWDR-RFLGRGSAG-LVYKGVLPSGQVVAIKHIYKS-----NNTDSFSREVEGLSRVRH 119
ND+D + LG+G+ G ++ +G+ A+K + K + E L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 120 PNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHH 179
P L L V E+ G L HL R + V T ER + AL YLH
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR-ERVFTEERARFYGAEIVSALEYLH- 122
Query: 180 YIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
+V+RDIKL N++L + K++DFGL K G+ + GT Y+ PE + +
Sbjct: 123 --SRDVVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATMKXFCGTPEYLAPEVLED 179
Query: 240 AKLTCASDIYSFGIVALQLLSGQ 262
A D + G+V +++ G+
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 12/203 (5%)
Query: 67 NDWDR-RFLGRGSAG-LVYKGVLPSGQVVAIKHIYKS-----NNTDSFSREVEGLSRVRH 119
ND+D + LG+G+ G ++ +G+ A+K + K + E L RH
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 69
Query: 120 PNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHH 179
P L L V E+ G L HL R + V T ER + AL YLH
Sbjct: 70 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR-ERVFTEERARFYGAEIVSALEYLH- 127
Query: 180 YIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
+V+RDIKL N++L + K++DFGL K G+ + GT Y+ PE + +
Sbjct: 128 --SRDVVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATMKXFCGTPEYLAPEVLED 184
Query: 240 AKLTCASDIYSFGIVALQLLSGQ 262
A D + G+V +++ G+
Sbjct: 185 NDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 12/203 (5%)
Query: 67 NDWDR-RFLGRGSAG-LVYKGVLPSGQVVAIKHIYKS-----NNTDSFSREVEGLSRVRH 119
ND+D + LG+G+ G ++ +G+ A+K + K + E L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 120 PNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHH 179
P L L V E+ G L HL R + V T ER + AL YLH
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR-ERVFTEERARFYGAEIVSALEYLH- 122
Query: 180 YIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
+V+RDIKL N++L + K++DFGL K G+ + GT Y+ PE + +
Sbjct: 123 --SRDVVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATMKXFCGTPEYLAPEVLED 179
Query: 240 AKLTCASDIYSFGIVALQLLSGQ 262
A D + G+V +++ G+
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 12/203 (5%)
Query: 67 NDWDR-RFLGRGSAG-LVYKGVLPSGQVVAIKHIYKS-----NNTDSFSREVEGLSRVRH 119
ND+D + LG+G+ G ++ +G+ A+K + K + E L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 120 PNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHH 179
P L L V E+ G L HL R + V T ER + AL YLH
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR-ERVFTEERARFYGAEIVSALEYLH- 122
Query: 180 YIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
+V+RDIKL N++L + K++DFGL K G+ + GT Y+ PE + +
Sbjct: 123 --SRDVVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATMKXFCGTPEYLAPEVLED 179
Query: 240 AKLTCASDIYSFGIVALQLLSGQ 262
A D + G+V +++ G+
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 12/203 (5%)
Query: 67 NDWDR-RFLGRGSAG-LVYKGVLPSGQVVAIKHIYKS-----NNTDSFSREVEGLSRVRH 119
ND+D + LG+G+ G ++ +G+ A+K + K + E L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 120 PNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHH 179
P L L V E+ G L HL R + V T ER + AL YLH
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR-ERVFTEERARFYGAEIVSALEYLH- 122
Query: 180 YIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
+V+RDIKL N++L + K++DFGL K G+ + GT Y+ PE + +
Sbjct: 123 --SRDVVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATMKTFCGTPEYLAPEVLED 179
Query: 240 AKLTCASDIYSFGIVALQLLSGQ 262
A D + G+V +++ G+
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 102/213 (47%), Gaps = 11/213 (5%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTD----SFSREVEGLSRVRHPNLVCLFGC 128
+G G+ G V+K + ++VA+K + ++ + S RE+ L ++H N+V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHR 188
+ LV+EFC +L ++ + L E L L + H ++HR
Sbjct: 70 LHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHR 125
Query: 189 DIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCAS-D 247
D+K N+L+ E KL+DFGLA+ G+ + ++ T+ Y P+ + AKL S D
Sbjct: 126 DLKPQNLLINRNGELKLADFGLARAFGI-PVRCYSAEVVTLWYRPPDVLFGAKLYSTSID 184
Query: 248 IYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
++S G + +L + + + D DQL R R
Sbjct: 185 MWSAGCIFAELANAARPLFPGNDVDDQLKRIFR 217
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 93/218 (42%), Gaps = 38/218 (17%)
Query: 74 LGRGSAGLVYKGVLPSGQV----VAIKHIYKSNNT---DSFSREVEGLSRVRHPNLVCLF 126
LGRG G+V++ +V AIK I N + REV+ L+++ HP +V F
Sbjct: 13 LGRGGFGVVFEA---KNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYF 69
Query: 127 GCCVEGGEQ------------YLVYEFCAAGNLAQHLLRKDSVLTWERRV--KILRDCAL 172
+E Y+ + C NL + + ++ ER V I A
Sbjct: 70 NAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAE 129
Query: 173 ALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM--EESKVFTDVR---- 226
A+ +LH ++HRD+K +NI T K+ DFGL + EE V T +
Sbjct: 130 AVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYAR 186
Query: 227 -----GTIGYMDPEYMTNAKLTCASDIYSFGIVALQLL 259
GT YM PE + + DI+S G++ +LL
Sbjct: 187 HTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 94/201 (46%), Gaps = 23/201 (11%)
Query: 74 LGRGSAGLVYKGV--LPSGQVVAIKHIYKSNNTDSFS-REVEGLSR-------VRHPNLV 123
LG+G+ +V + V P+ + A K NT S R+ + L R ++HPN+V
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAA-----KIINTKKLSARDHQKLEREARICRLLKHPNIV 93
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG 183
L E G YLV++ G L + ++ ++ + I + L ++H
Sbjct: 94 RLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQ----ILESVNHIHQH 149
Query: 184 CIVHRDIKLTNILLTEKLEP---KLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNA 240
IVHRD+K N+LL K + KL+DFGLA + E+ F GT GY+ PE +
Sbjct: 150 DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWF-GFAGTPGYLSPEVLRKD 208
Query: 241 KLTCASDIYSFGIVALQLLSG 261
DI++ G++ LL G
Sbjct: 209 PYGKPVDIWACGVILYILLVG 229
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 114/269 (42%), Gaps = 30/269 (11%)
Query: 89 SGQVVAIKHIYKS--NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGG--EQYLVYEFCAA 144
+G +VA+K + S + F RE++ L + +V G G E LV E+ +
Sbjct: 35 TGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPS 94
Query: 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPK 204
G L L R + L R + + YL VHRD+ NIL+ + K
Sbjct: 95 GCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVK 151
Query: 205 LSDFGLAKMLGMEESKVFTDVRG--TIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-- 260
++DFGLAK+L +++ G I + PE +++ + SD++SFG+V +L +
Sbjct: 152 IADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYC 211
Query: 261 ------GQKVIELDFDARD--QLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKI 312
+ + + RD L R + G+R P A+ ++K
Sbjct: 212 DKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRLPAPPACP--------AEVHELMK- 262
Query: 313 AVLCVAKSSKGRPTIDVVYEEIDKAWKNT 341
LC A S + RP+ + ++D W +
Sbjct: 263 --LCWAPSPQDRPSFSALGPQLDMLWSGS 289
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 114/269 (42%), Gaps = 30/269 (11%)
Query: 89 SGQVVAIKHIYKS--NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYL--VYEFCAA 144
+G +VA+K + S + F RE++ L + +V G G Q L V E+ +
Sbjct: 39 TGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPS 98
Query: 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPK 204
G L L R + L R + + YL VHRD+ NIL+ + K
Sbjct: 99 GCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVK 155
Query: 205 LSDFGLAKMLGMEESKVFTDVRG--TIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-- 260
++DFGLAK+L +++ G I + PE +++ + SD++SFG+V +L +
Sbjct: 156 IADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYC 215
Query: 261 ------GQKVIELDFDARD--QLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKI 312
+ + + RD L R + G+R P A+ ++K
Sbjct: 216 DKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRLPAPPACP--------AEVHELMK- 266
Query: 313 AVLCVAKSSKGRPTIDVVYEEIDKAWKNT 341
LC A S + RP+ + ++D W +
Sbjct: 267 --LCWAPSPQDRPSFSALGPQLDMLWSGS 293
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 91/189 (48%), Gaps = 6/189 (3%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYK-SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG G G V+ VA+K + S + ++F E + ++H LV L V
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLH-AVVTK 254
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG-CIVHRDIK 191
Y++ EF A G+L L + ++ + L D + + +I+ +HRD++
Sbjct: 255 EPIYIITEFMAKGSLLDFLKSDEGS---KQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLR 311
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
NIL++ L K++DFGLA+++ E + I + PE + T SD++SF
Sbjct: 312 AANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSF 371
Query: 252 GIVALQLLS 260
GI+ +++++
Sbjct: 372 GILLMEIVT 380
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G+G+ G V+K +GQ VA+K + N + F RE++ L ++H N+V L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 129 CVEG--------GEQYLVYEFCAA--GNLAQHLLRKDSVLTWERRVKILRDCALALRYLH 178
C G YLV++FC L ++L K ++ +R +++L + L Y+H
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN---GLYYIH 141
Query: 179 HYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM---EESKVFTDVRGTIGYMDPE 235
I+HRD+K N+L+T KL+DFGLA+ + + + + T+ Y PE
Sbjct: 142 R---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 198
Query: 236 YMTNAK-LTCASDIYSFGIVALQLLSGQKVIE 266
+ + D++ G + ++ + +++
Sbjct: 199 LLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQ 230
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G+G+ G V+K +GQ VA+K + N + F RE++ L ++H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 129 CVEG--------GEQYLVYEFCAA--GNLAQHLLRKDSVLTWERRVKILRDCALALRYLH 178
C G YLV++FC L ++L K ++ +R +++L + L Y+H
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN---GLYYIH 142
Query: 179 HYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM---EESKVFTDVRGTIGYMDPE 235
I+HRD+K N+L+T KL+DFGLA+ + + + + T+ Y PE
Sbjct: 143 R---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 199
Query: 236 YMTNAK-LTCASDIYSFGIVALQLLSGQKVIE 266
+ + D++ G + ++ + +++
Sbjct: 200 LLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQ 231
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G+G+ G V+K +GQ VA+K + N + F RE++ L ++H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 129 CVEG--------GEQYLVYEFCAA--GNLAQHLLRKDSVLTWERRVKILRDCALALRYLH 178
C G YLV++FC L ++L K ++ +R +++L + L Y+H
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN---GLYYIH 142
Query: 179 HYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM---EESKVFTDVRGTIGYMDPE 235
I+HRD+K N+L+T KL+DFGLA+ + + + + T+ Y PE
Sbjct: 143 R---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 199
Query: 236 YMTNAK-LTCASDIYSFGIVALQLLSGQKVIE 266
+ + D++ G + ++ + +++
Sbjct: 200 LLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQ 231
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 81/174 (46%), Gaps = 14/174 (8%)
Query: 94 AIKHIYKSNNTDSFSREVEGLSRV-RHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLL 152
A+K I KS S E+E L R +HPN++ L +G YLV E G L +L
Sbjct: 56 AVKVIDKSKRDPS--EEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL 113
Query: 153 RKDSVLTWERRVK-ILRDCALALRYLHHYIDGCIVHRDIKLTNIL-LTEKLEP---KLSD 207
R+ ER +L + YLH +VHRD+K +NIL + E P ++ D
Sbjct: 114 RQK--FFSEREASFVLHTIGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICD 168
Query: 208 FGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
FG AK L E + T T ++ PE + DI+S GI+ +L+G
Sbjct: 169 FGFAKQLRAENGLLMTPCY-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 74 LGRGSAGLVYKGVLPS----GQV----VAIKHIYKS--NNTDSFSREVEGLSRVRHPNLV 123
LG+G+ ++KGV GQ+ V +K + K+ N ++SF +S++ H +LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG 183
+G C G E LV EF G+L +L + + + ++++ + A A+ +L +
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWAMHFLE---EN 132
Query: 184 CIVHRDIKLTNILLTEKLEPKLSDFGLAKM--LGMEESKVFTDV-RGTIGYMDPEYMTNA 240
++H ++ NILL + + K + K+ G+ + + D+ + I ++ PE + N
Sbjct: 133 TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIENP 192
Query: 241 K-LTCASDIYSFGIVALQLLSG 261
K L A+D +SFG ++ SG
Sbjct: 193 KNLNLATDKWSFGTTLWEICSG 214
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 90/209 (43%), Gaps = 26/209 (12%)
Query: 72 RFLGRGSAGLVYKGVLPSGQVV-AIKHIYKSN-----------NTDSFSREVEG----LS 115
R LG G+ G V +G AIK I KS N + F E+ L
Sbjct: 42 RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLK 101
Query: 116 RVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALR 175
+ HPN++ LF + YLV EF G L + ++ + + I++ +
Sbjct: 102 SLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECD-AANIMKQILSGIC 160
Query: 176 YLHHYIDGCIVHRDIKLTNILLTEK---LEPKLSDFGLAKMLGMEESKVFTDVRGTIGYM 232
YLH + IVHRDIK NILL K L K+ DFGL+ + D GT Y+
Sbjct: 161 YLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK--LRDRLGTAYYI 215
Query: 233 DPEYMTNAKLTCASDIYSFGIVALQLLSG 261
PE + K D++S G++ LL G
Sbjct: 216 APEVLK-KKYNEKCDVWSCGVIMYILLCG 243
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 81/174 (46%), Gaps = 14/174 (8%)
Query: 94 AIKHIYKSNNTDSFSREVEGLSRV-RHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLL 152
A+K I KS S E+E L R +HPN++ L +G YLV E G L +L
Sbjct: 56 AVKVIDKSKRDPS--EEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL 113
Query: 153 RKDSVLTWERRVK-ILRDCALALRYLHHYIDGCIVHRDIKLTNIL-LTEKLEP---KLSD 207
R+ ER +L + YLH +VHRD+K +NIL + E P ++ D
Sbjct: 114 RQK--FFSEREASFVLHTIGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICD 168
Query: 208 FGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
FG AK L E + T T ++ PE + DI+S GI+ +L+G
Sbjct: 169 FGFAKQLRAENGLLMTPCY-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 125/308 (40%), Gaps = 62/308 (20%)
Query: 38 SPKPTKEIYSTTWSGLYRFSKDEIENAINNDWDRRFL-------GRGSAGLVYKGVLP-S 89
SP P + SG YR + W+ R + G G+ G V V +
Sbjct: 3 SPPPAR-------SGFYR------QEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRT 49
Query: 90 GQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVY 139
G VAIK +Y+ ++ F+ RE+ L +RH N++ L + + YLV
Sbjct: 50 GAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVM 109
Query: 140 EFCAA--GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILL 197
F G L +H L +R ++ LRY+H I+HRD+K N+ +
Sbjct: 110 PFMGTDLGKLMKH-----EKLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAV 161
Query: 198 TEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVAL 256
E E K+ DFGLA+ E T Y PE + N + T DI+S G +
Sbjct: 162 NEDCELKILDFGLARQADSEMXGXVV----TRWYRAPEVILNWMRYTQTVDIWSVGCIMA 217
Query: 257 QLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGN-----------INRAD 305
++++G+ + F D L + + + P +F RL + + + D
Sbjct: 218 EMITGKTL----FKGSDHLDQLKEIMKVTGTPPAEFVQ-RLQSDEAKNYMKGLPELEKKD 272
Query: 306 FESILKIA 313
F SIL A
Sbjct: 273 FASILTNA 280
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 25/212 (11%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G+G+ G V+K +GQ VA+K + N + F RE++ L ++H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 129 CVEGGEQY--------LVYEFCAA--GNLAQHLLRKDSVLTWERRVKILRDCALALRYLH 178
C Y LV++FC L ++L K ++ +R +++L + L Y+H
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN---GLYYIH 142
Query: 179 HYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM---EESKVFTDVRGTIGYMDPE 235
I+HRD+K N+L+T KL+DFGLA+ + + + + T+ Y PE
Sbjct: 143 R---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 199
Query: 236 YMTNAK-LTCASDIYSFGIVALQLLSGQKVIE 266
+ + D++ G + ++ + +++
Sbjct: 200 LLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQ 231
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 27/220 (12%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGCC 129
+G G+ G+VYK G+ A+K I + RE+ L ++H N+V L+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 130 VEGGEQYLVYEFCAAGNLAQHLLRK--------DSVLTWERRVKILRDCALALRYLHHYI 181
LV+E +L Q L + +SV +++L A Y H
Sbjct: 70 HTKKRLVLVFE-----HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA----YCH--- 117
Query: 182 DGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPE-YMTNA 240
D ++HRD+K N+L+ + E K++DFGLA+ G+ K +T T+ Y P+ M +
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK-YTHEVVTLWYRAPDVLMGSK 176
Query: 241 KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
K + DI+S G + ++++G + +A DQL R R
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA-DQLMRIFR 215
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 27/220 (12%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGCC 129
+G G+ G+VYK G+ A+K I + RE+ L ++H N+V L+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 130 VEGGEQYLVYEFCAAGNLAQHLLRK--------DSVLTWERRVKILRDCALALRYLHHYI 181
LV+E +L Q L + +SV +++L A Y H
Sbjct: 70 HTKKRLVLVFE-----HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA----YCH--- 117
Query: 182 DGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPE-YMTNA 240
D ++HRD+K N+L+ + E K++DFGLA+ G+ K +T T+ Y P+ M +
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK-YTHEVVTLWYRAPDVLMGSK 176
Query: 241 KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
K + DI+S G + ++++G + +A DQL R R
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGAPLFPGVSEA-DQLMRIFR 215
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 27/220 (12%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGCC 129
+G G+ G+VYK G+ A+K I + RE+ L ++H N+V L+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 130 VEGGEQYLVYEFCAAGNLAQHLLRK--------DSVLTWERRVKILRDCALALRYLHHYI 181
LV+E +L Q L + +SV +++L A Y H
Sbjct: 70 HTKKRLVLVFE-----HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA----YCH--- 117
Query: 182 DGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPE-YMTNA 240
D ++HRD+K N+L+ + E K++DFGLA+ G+ K +T T+ Y P+ M +
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK-YTHEIVTLWYRAPDVLMGSK 176
Query: 241 KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
K + DI+S G + ++++G + +A DQL R R
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA-DQLMRIFR 215
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 92/196 (46%), Gaps = 13/196 (6%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIKHI----YKSNNTDSFSREVEGLSRVRHPNLVCLFGC 128
LG+G+ +V + V + +GQ A I + + RE ++HPN+V L
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 78
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHR 188
E G YL+++ G L + ++ ++ + ++ A+ + H +VHR
Sbjct: 79 ISEEGHHYLIFDLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCHQM---GVVHR 134
Query: 189 DIKLTNILLTEKLEP---KLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
++K N+LL KL+ KL+DFGLA + E+ F GT GY+ PE +
Sbjct: 135 NLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWF-GFAGTPGYLSPEVLRKDPYGKP 193
Query: 246 SDIYSFGIVALQLLSG 261
D+++ G++ LL G
Sbjct: 194 VDLWACGVILYILLVG 209
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 81/173 (46%), Gaps = 12/173 (6%)
Query: 94 AIKHIYKSNNTDSFSREVEGLSRV-RHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLL 152
A+K I KS + E+E L R +HPN++ L +G Y+V E G L +L
Sbjct: 51 AVKIIDKSKRDPT--EEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKIL 108
Query: 153 RKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNIL-LTEKLEP---KLSDF 208
R+ + +L + YLH +VHRD+K +NIL + E P ++ DF
Sbjct: 109 RQ-KFFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDF 164
Query: 209 GLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
G AK L E + T T ++ PE + A DI+S G++ +L+G
Sbjct: 165 GFAKQLRAENGLLMTPCY-TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 97/216 (44%), Gaps = 31/216 (14%)
Query: 71 RRFLGRGSAGLVY----KGVLPSGQ--VVAIKHIYKSN--NTDSFSREVEGLSRVRHPNL 122
+R LG G+ G V+ + P+ +VA+K + F RE E L+ ++H ++
Sbjct: 20 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 79
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHL---------------LRKDSVLTWERRVKIL 167
V +G C +G +V+E+ G+L + L + L + + I
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 168 RDCALALRYL--HHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAK-MLGMEESKVFTD 224
A + YL H+ VHRD+ N L+ L K+ DFG+++ + + +V
Sbjct: 140 SQIASGMVYLASQHF-----VHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGH 194
Query: 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
I +M PE + K T SD++SFG++ ++ +
Sbjct: 195 TMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 36/220 (16%)
Query: 74 LGRGSAGLVYKGVL-----PSGQVVAIKHIYKSNNTDSFSR----EVEGLSRVRHPNLVC 124
LG G G V K +G + K N + S R E L +V HP+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSV-----------------------LTWE 161
L+G C + G L+ E+ G+L L V LT
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 162 RRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKV 221
+ + ++YL + +VHRD+ NIL+ E + K+SDFGL++ + E+S V
Sbjct: 151 DLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 222 -FTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
+ R + +M E + + T SD++SFG++ ++++
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 102/213 (47%), Gaps = 11/213 (5%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTD----SFSREVEGLSRVRHPNLVCLFGC 128
+G G+ G V+K + ++VA+K + ++ + S RE+ L ++H N+V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHR 188
+ LV+EFC +L ++ + L E L L + H ++HR
Sbjct: 70 LHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHR 125
Query: 189 DIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCAS-D 247
D+K N+L+ E KL++FGLA+ G+ + ++ T+ Y P+ + AKL S D
Sbjct: 126 DLKPQNLLINRNGELKLANFGLARAFGI-PVRCYSAEVVTLWYRPPDVLFGAKLYSTSID 184
Query: 248 IYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280
++S G + +L + + + D DQL R R
Sbjct: 185 MWSAGCIFAELANAGRPLFPGNDVDDQLKRIFR 217
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 14/200 (7%)
Query: 72 RFLGRGSAGLVYKG-VLPSGQ------VVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVC 124
R +G+G G+VY G + Q + ++ I + ++F RE + + HPN++
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 125 LFGCCVEG-GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG 183
L G + G +++ + G+L Q + T + + A + YL +
Sbjct: 87 LIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL---AEQ 143
Query: 184 CIVHRDIKLTNILLTEKLEPKLSDFGLAK-MLGMEESKV--FTDVRGTIGYMDPEYMTNA 240
VHRD+ N +L E K++DFGLA+ +L E V R + + E +
Sbjct: 144 KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTY 203
Query: 241 KLTCASDIYSFGIVALQLLS 260
+ T SD++SFG++ +LL+
Sbjct: 204 RFTTKSDVWSFGVLLWELLT 223
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 36/220 (16%)
Query: 74 LGRGSAGLVYKGVL-----PSGQVVAIKHIYKSNNTDSFSR----EVEGLSRVRHPNLVC 124
LG G G V K +G + K N + S R E L +V HP+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSV-----------------------LTWE 161
L+G C + G L+ E+ G+L L V LT
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 162 RRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKV 221
+ + ++YL + +VHRD+ NIL+ E + K+SDFGL++ + E+S V
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 222 -FTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
+ R + +M E + + T SD++SFG++ ++++
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 117/297 (39%), Gaps = 65/297 (21%)
Query: 72 RFLGRGSAGLVYKGVL------PSGQVVAIK---HIYKSNNTDSFSREVEGLSRVRHPNL 122
R LG G+ G VY+G + PS VA+K +Y + F E +S+ H N+
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNI 110
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLR------KDSVLTWERRVKILRDCALALRY 176
V G ++ ++++ E A G+L L + S L + + RD A +Y
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 177 L--HHYIDGCIVHRDIKLTNILLT---EKLEPKLSDFGLAK-MLGMEESKVFTDVRGTIG 230
L +H+I HRDI N LLT K+ DFG+A+ + + +
Sbjct: 171 LEENHFI-----HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 231 YMDPEYMTNAKLTCASDIYSFGIVALQLL----------SGQKVIELDFDARDQLTRKAR 280
+M PE T +D +SFG++ ++ S Q+V+E
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF------------- 272
Query: 281 DVSMGKR--PIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEID 335
V+ G R P K+ P + +I C + RP ++ E I+
Sbjct: 273 -VTSGGRMDPPKNCPGP-------------VYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 67/141 (47%), Gaps = 7/141 (4%)
Query: 118 RHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYL 177
+HP V L EGG YL E C +L QH + L + LRD LAL +L
Sbjct: 115 QHPCCVRLEQAWEEGGILYLQTELCGP-SLQQHCEAWGASLPEAQVWGYLRDTLLALAHL 173
Query: 178 HHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYM 237
H +VH D+K NI L + KL DFGL LG + + G YM PE +
Sbjct: 174 HSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE--GDPRYMAPELL 228
Query: 238 TNAKLTCASDIYSFGIVALQL 258
+ T A+D++S G+ L++
Sbjct: 229 QGSYGT-AADVFSLGLTILEV 248
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 70 DRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGC 128
D + +G GS G+VY+ L SG++VAIK + + +RE++ + ++ H N+V L
Sbjct: 24 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK--NRELQIMRKLDHCNIVRLRYF 81
Query: 129 CVEGGEQ------YLVYEFCAAG--NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
GE+ LV ++ A +A+H R L + +L Y+H +
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 181 IDGCIVHRDIKLTNILL-TEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
I HRDIK N+LL + KL DFG AK L E V + Y PE +
Sbjct: 142 ---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYYRAPELIFG 196
Query: 240 AK-LTCASDIYSFGIVALQLLSGQKVIELDFDARDQL 275
A T + D++S G V +LL GQ + D DQL
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGD-SGVDQL 232
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 104/248 (41%), Gaps = 49/248 (19%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIK---HIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCC 129
LG+G+ V++G +G + AIK +I D RE E L ++ H N+V LF
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIE 76
Query: 130 VEGGEQY--LVYEFCAAGNLAQHLLRKDSV--LTWERRVKILRDCALALRYLHHYIDGCI 185
E ++ L+ EFC G+L L + L + +LRD + +L + I
Sbjct: 77 EETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGI 133
Query: 186 VHRDIKLTNIL--LTEKLEP--KLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNA- 240
VHR+IK NI+ + E + KL+DFG A+ L E+ + F + GT Y+ P+ A
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL--EDDEQFVSLYGTEEYLHPDMYERAV 191
Query: 241 -------KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFE 293
K D++S G+ + G P + FE
Sbjct: 192 LRKDHQKKYGATVDLWSIGVTFYH------------------------AATGSLPFRPFE 227
Query: 294 DPRLNGNI 301
PR N +
Sbjct: 228 GPRRNKEV 235
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 36/220 (16%)
Query: 74 LGRGSAGLVYKGVL-----PSGQVVAIKHIYKSNNTDSFSR----EVEGLSRVRHPNLVC 124
LG G G V K +G + K N + S R E L +V HP+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSV-----------------------LTWE 161
L+G C + G L+ E+ G+L L V LT
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 162 RRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKV 221
+ + ++YL + +VHRD+ NIL+ E + K+SDFGL++ + E+S V
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV 207
Query: 222 -FTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
+ R + +M E + + T SD++SFG++ ++++
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 68/149 (45%), Gaps = 7/149 (4%)
Query: 114 LSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILR-DCAL 172
L V+HP LV L + Y V ++ G L HL R+ L E R + + A
Sbjct: 93 LKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFL--EPRARFYAAEIAS 150
Query: 173 ALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYM 232
AL YLH IV+RD+K NILL + L+DFGL K +E + + GT Y+
Sbjct: 151 ALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKE-NIEHNSTTSTFCGTPEYL 206
Query: 233 DPEYMTNAKLTCASDIYSFGIVALQLLSG 261
PE + D + G V ++L G
Sbjct: 207 APEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 98/209 (46%), Gaps = 29/209 (13%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTDSFS---REVEGLSRVRHPNLVCLFGCC 129
LG G+ VYKG+ +G VA+K + + + S RE+ + ++H N+V L+
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI 72
Query: 130 VEGGEQYLVYEFC-----------AAGNLAQHL-LRKDSVLTWERRVKILRDCALALRYL 177
+ LV+EF GN + L L W+ L +
Sbjct: 73 HTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQ--------LLQGLAFC 124
Query: 178 HHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYM 237
H + I+HRD+K N+L+ ++ + KL DFGLA+ G+ + ++V T+ Y P+ +
Sbjct: 125 H---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYRAPDVL 180
Query: 238 TNAKLTCAS-DIYSFGIVALQLLSGQKVI 265
++ S DI+S G + ++++G+ +
Sbjct: 181 MGSRTYSTSIDIWSCGCILAEMITGKPLF 209
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 98/205 (47%), Gaps = 24/205 (11%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRV--RHPNLVCLFGCCV- 130
+G+G G V++G L G+ VA+K I+ S + S+ RE E + V RH N++ +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVK-IFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMT 73
Query: 131 ---EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG---- 183
+ +L+ + G+L L R+ R+ + C LA +LH I G
Sbjct: 74 SRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLA--HLHVEIFGTQGK 131
Query: 184 -CIVHRDIKLTNILLTEKLEPKLSDFGLAKM--LGMEESKVFTDVR-GTIGYMDPEYMTN 239
I HRD K N+L+ L+ ++D GLA M G + + + R GT YM PE +
Sbjct: 132 PAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDE 191
Query: 240 A-KLTC-----ASDIYSFGIVALQL 258
+ C +DI++FG+V ++
Sbjct: 192 QIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 104/248 (41%), Gaps = 49/248 (19%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIK---HIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCC 129
LG+G+ V++G +G + AIK +I D RE E L ++ H N+V LF
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIE 76
Query: 130 VEGGEQY--LVYEFCAAGNLAQHLLRKDSV--LTWERRVKILRDCALALRYLHHYIDGCI 185
E ++ L+ EFC G+L L + L + +LRD + +L + I
Sbjct: 77 EETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGI 133
Query: 186 VHRDIKLTNIL--LTEKLEP--KLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNA- 240
VHR+IK NI+ + E + KL+DFG A+ L E+ + F + GT Y+ P+ A
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL--EDDEQFVXLYGTEEYLHPDMYERAV 191
Query: 241 -------KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFE 293
K D++S G+ + G P + FE
Sbjct: 192 LRKDHQKKYGATVDLWSIGVTFYH------------------------AATGSLPFRPFE 227
Query: 294 DPRLNGNI 301
PR N +
Sbjct: 228 GPRRNKEV 235
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 12/173 (6%)
Query: 94 AIKHIYKSNNTDSFSREVEGLSRV-RHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLL 152
A+K I KS + E+E L R +HPN++ L +G Y+V E G L +L
Sbjct: 51 AVKIIDKSKRDPT--EEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKIL 108
Query: 153 RKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNIL-LTEKLEP---KLSDF 208
R+ + +L + YLH +VHRD+K +NIL + E P ++ DF
Sbjct: 109 RQ-KFFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDF 164
Query: 209 GLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
G AK L E + T T ++ PE + A DI+S G++ L+G
Sbjct: 165 GFAKQLRAENGLLXTPCY-TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 26/226 (11%)
Query: 56 FSKDEIENAINNDWDRRFLGRGSAGLVYKGVLPSGQV-------VAIKHIYKSNNTDS-- 106
F DE E A R LG+GS G+VY+GV G V VAIK + ++ +
Sbjct: 6 FVPDEWEVAREKITMSRELGQGSFGMVYEGVA-KGVVKDEPETRVAIKTVNEAASMRERI 64
Query: 107 -FSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHL------LRKDSVL- 158
F E + ++V L G +G ++ E G+L +L + + VL
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 124
Query: 159 --TWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM 216
+ + +++ + A + YL+ VHRD+ N ++ E K+ DFG+ + +
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-Y 180
Query: 217 EESKVFTDVRG--TIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
E +G + +M PE + + T SD++SFG+V ++ +
Sbjct: 181 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Query: 114 LSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALA 173
L RHP L L V E+ G L HL R + V + +R + A
Sbjct: 202 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR-ERVFSEDRARFYGAEIVSA 260
Query: 174 LRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMD 233
L YLH + +V+RD+KL N++L + K++DFGL K G+++ GT Y+
Sbjct: 261 LDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-GIKDGATMKTFCGTPEYLA 317
Query: 234 PEYMTNAKLTCASDIYSFGIVALQLLSGQ 262
PE + + A D + G+V +++ G+
Sbjct: 318 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Query: 114 LSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALA 173
L RHP L L V E+ G L HL R + V + +R + A
Sbjct: 205 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR-ERVFSEDRARFYGAEIVSA 263
Query: 174 LRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMD 233
L YLH + +V+RD+KL N++L + K++DFGL K G+++ GT Y+
Sbjct: 264 LDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-GIKDGATMKTFCGTPEYLA 320
Query: 234 PEYMTNAKLTCASDIYSFGIVALQLLSGQ 262
PE + + A D + G+V +++ G+
Sbjct: 321 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 97/211 (45%), Gaps = 27/211 (12%)
Query: 71 RRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNNTDSFS------------REVEGLSRV 117
+ LGRG + +V + + P+ + A+K I SFS +EV+ L +V
Sbjct: 9 KEILGRGVSSVVRRCIHKPTCKEYAVK-IIDVTGGGSFSAEEVQELREATLKEVDILRKV 67
Query: 118 R-HPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRY 176
HPN++ L +LV++ G L +L K ++ E R KI+R +
Sbjct: 68 SGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR-KIMRALLEVICA 126
Query: 177 LHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEY 236
LH IVHRD+K NILL + + KL+DFG + L E +V GT Y+ PE
Sbjct: 127 LHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREVCGTPSYLAPEI 181
Query: 237 M------TNAKLTCASDIYSFGIVALQLLSG 261
+ + D++S G++ LL+G
Sbjct: 182 IECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 101/226 (44%), Gaps = 26/226 (11%)
Query: 56 FSKDEIENAINNDWDRRFLGRGSAGLVYKGVLPSGQV-------VAIKHIYKSNNTDS-- 106
+ DE E A R LG+GS G+VY+GV G V VAIK + ++ +
Sbjct: 9 YVPDEWEVAREKITMSRELGQGSFGMVYEGVA-KGVVKDEPETRVAIKTVNEAASMRERI 67
Query: 107 -FSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHL------LRKDSVL- 158
F E + ++V L G +G ++ E G+L +L + + VL
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 159 --TWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM 216
+ + +++ + A + YL+ VHRD+ N ++ E K+ DFG+ + +
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-X 183
Query: 217 EESKVFTDVRG--TIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
E +G + +M PE + + T SD++SFG+V ++ +
Sbjct: 184 ETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Query: 114 LSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALA 173
L RHP L L V E+ G L HL R + V + +R + A
Sbjct: 64 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR-ERVFSEDRARFYGAEIVSA 122
Query: 174 LRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMD 233
L YLH + +V+RD+KL N++L + K++DFGL K G+++ GT Y+
Sbjct: 123 LDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-GIKDGATMKXFCGTPEYLA 179
Query: 234 PEYMTNAKLTCASDIYSFGIVALQLLSGQ 262
PE + + A D + G+V +++ G+
Sbjct: 180 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Query: 114 LSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALA 173
L RHP L L V E+ G L HL R + V + +R + A
Sbjct: 62 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR-ERVFSEDRARFYGAEIVSA 120
Query: 174 LRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMD 233
L YLH + +V+RD+KL N++L + K++DFGL K G+++ GT Y+
Sbjct: 121 LDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-GIKDGATMKXFCGTPEYLA 177
Query: 234 PEYMTNAKLTCASDIYSFGIVALQLLSGQ 262
PE + + A D + G+V +++ G+
Sbjct: 178 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 100/217 (46%), Gaps = 19/217 (8%)
Query: 70 DRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGC 128
D + +G GS G+VY+ L SG++VAIK + + +RE++ + ++ H N+V L
Sbjct: 24 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--NRELQIMRKLDHCNIVRLRYF 81
Query: 129 CVEGGEQ------YLVYEFCAAG--NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
GE+ LV ++ +A+H R L + +L Y+H +
Sbjct: 82 FYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 181 IDGCIVHRDIKLTNILL-TEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
I HRDIK N+LL + KL DFG AK L E V + Y PE +
Sbjct: 142 ---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYYRAPELIFG 196
Query: 240 AK-LTCASDIYSFGIVALQLLSGQKVIELDFDARDQL 275
A T + D++S G V +LL GQ + D DQL
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGD-SGVDQL 232
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 18/206 (8%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKS----NNTDSFSREVEGLSRVRHPNLVCL--- 125
+G G+ G+V +GQ VAIK I + N RE++ L +H N++ +
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 126 FGCCVEGGEQYLVYEFC--AAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG 183
V GE VY +L Q ++ LT E L L+Y+H
Sbjct: 122 LRPTVPYGEFKSVYVVLDLMESDLHQ-IIHSSQPLTLEHVRYFLYQLLRGLKYMH---SA 177
Query: 184 CIVHRDIKLTNILLTEKLEPKLSDFGLAKML---GMEESKVFTDVRGTIGYMDPEYMTN- 239
++HRD+K +N+L+ E E K+ DFG+A+ L E T+ T Y PE M +
Sbjct: 178 QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSL 237
Query: 240 AKLTCASDIYSFGIVALQLLSGQKVI 265
+ T A D++S G + ++L+ +++
Sbjct: 238 HEYTQAIDLWSVGCIFGEMLARRQLF 263
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 26/223 (11%)
Query: 59 DEIENAINNDWDRRFLGRGSAGLVYKGVLPSGQV-------VAIKHIYKSNNTDS---FS 108
DE E A R LG+GS G+VY+GV G V VAIK + ++ + F
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEGVA-KGVVKDEPETRVAIKTVNEAASMRERIEFL 61
Query: 109 REVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHL------LRKDSVL---T 159
E + ++V L G +G ++ E G+L +L + + VL +
Sbjct: 62 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 121
Query: 160 WERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES 219
+ +++ + A + YL+ VHRD+ N ++ E K+ DFG+ + + E
Sbjct: 122 LSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-XETD 177
Query: 220 KVFTDVRG--TIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
+G + +M PE + + T SD++SFG+V ++ +
Sbjct: 178 XXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Query: 114 LSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALA 173
L RHP L L V E+ G L HL R + V + +R + A
Sbjct: 63 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR-ERVFSEDRARFYGAEIVSA 121
Query: 174 LRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMD 233
L YLH + +V+RD+KL N++L + K++DFGL K G+++ GT Y+
Sbjct: 122 LDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-GIKDGATMKXFCGTPEYLA 178
Query: 234 PEYMTNAKLTCASDIYSFGIVALQLLSGQ 262
PE + + A D + G+V +++ G+
Sbjct: 179 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 100/217 (46%), Gaps = 19/217 (8%)
Query: 70 DRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGC 128
D + +G GS G+VY+ L SG++VAIK + + +RE++ + ++ H N+V L
Sbjct: 43 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--NRELQIMRKLDHCNIVRLRYF 100
Query: 129 CVEGGEQ------YLVYEFCAAG--NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
GE+ LV ++ +A+H R L + +L Y+H +
Sbjct: 101 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 160
Query: 181 IDGCIVHRDIKLTNILL-TEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
I HRDIK N+LL + KL DFG AK L E V + Y PE +
Sbjct: 161 ---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYYRAPELIFG 215
Query: 240 AK-LTCASDIYSFGIVALQLLSGQKVIELDFDARDQL 275
A T + D++S G V +LL GQ + D DQL
Sbjct: 216 ATDYTSSIDVWSAGCVLAELLLGQPIFPGD-SGVDQL 251
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 100/217 (46%), Gaps = 19/217 (8%)
Query: 70 DRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGC 128
D + +G GS G+VY+ L SG++VAIK + + +RE++ + ++ H N+V L
Sbjct: 24 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--NRELQIMRKLDHCNIVRLRYF 81
Query: 129 CVEGGEQ------YLVYEFCAAG--NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
GE+ LV ++ +A+H R L + +L Y+H +
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 181 IDGCIVHRDIKLTNILL-TEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
I HRDIK N+LL + KL DFG AK L E V + Y PE +
Sbjct: 142 ---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYYRAPELIFG 196
Query: 240 AK-LTCASDIYSFGIVALQLLSGQKVIELDFDARDQL 275
A T + D++S G V +LL GQ + D DQL
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGD-SGVDQL 232
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 100/217 (46%), Gaps = 19/217 (8%)
Query: 70 DRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGC 128
D + +G GS G+VY+ L SG++VAIK + + +RE++ + ++ H N+V L
Sbjct: 32 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--NRELQIMRKLDHCNIVRLRYF 89
Query: 129 CVEGGEQ------YLVYEFCAAG--NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
GE+ LV ++ +A+H R L + +L Y+H +
Sbjct: 90 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 149
Query: 181 IDGCIVHRDIKLTNILL-TEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
I HRDIK N+LL + KL DFG AK L E V + Y PE +
Sbjct: 150 ---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYYRAPELIFG 204
Query: 240 AK-LTCASDIYSFGIVALQLLSGQKVIELDFDARDQL 275
A T + D++S G V +LL GQ + D DQL
Sbjct: 205 ATDYTSSIDVWSAGCVLAELLLGQPIFPGD-SGVDQL 240
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 97/211 (45%), Gaps = 27/211 (12%)
Query: 71 RRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNNTDSFS------------REVEGLSRV 117
+ LGRG + +V + + P+ + A+K I SFS +EV+ L +V
Sbjct: 22 KEILGRGVSSVVRRCIHKPTCKEYAVK-IIDVTGGGSFSAEEVQELREATLKEVDILRKV 80
Query: 118 R-HPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRY 176
HPN++ L +LV++ G L +L K ++ E R KI+R +
Sbjct: 81 SGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR-KIMRALLEVICA 139
Query: 177 LHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEY 236
LH IVHRD+K NILL + + KL+DFG + L E +V GT Y+ PE
Sbjct: 140 LHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREVCGTPSYLAPEI 194
Query: 237 M------TNAKLTCASDIYSFGIVALQLLSG 261
+ + D++S G++ LL+G
Sbjct: 195 IECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 100/217 (46%), Gaps = 19/217 (8%)
Query: 70 DRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGC 128
D + +G GS G+VY+ L SG++VAIK + + +RE++ + ++ H N+V L
Sbjct: 24 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--NRELQIMRKLDHCNIVRLRYF 81
Query: 129 CVEGGEQ------YLVYEFCAAG--NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
GE+ LV ++ +A+H R L + +L Y+H +
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 181 IDGCIVHRDIKLTNILL-TEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
I HRDIK N+LL + KL DFG AK L E V + Y PE +
Sbjct: 142 ---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYYRAPELIFG 196
Query: 240 AK-LTCASDIYSFGIVALQLLSGQKVIELDFDARDQL 275
A T + D++S G V +LL GQ + D DQL
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGD-SGVDQL 232
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 100/217 (46%), Gaps = 19/217 (8%)
Query: 70 DRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGC 128
D + +G GS G+VY+ L SG++VAIK + + +RE++ + ++ H N+V L
Sbjct: 36 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--NRELQIMRKLDHCNIVRLRYF 93
Query: 129 CVEGGEQ------YLVYEFCAAG--NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
GE+ LV ++ +A+H R L + +L Y+H +
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 153
Query: 181 IDGCIVHRDIKLTNILL-TEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
I HRDIK N+LL + KL DFG AK L E V + Y PE +
Sbjct: 154 ---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYYRAPELIFG 208
Query: 240 AK-LTCASDIYSFGIVALQLLSGQKVIELDFDARDQL 275
A T + D++S G V +LL GQ + D DQL
Sbjct: 209 ATDYTSSIDVWSAGCVLAELLLGQPIFPGD-SGVDQL 244
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 100/217 (46%), Gaps = 19/217 (8%)
Query: 70 DRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGC 128
D + +G GS G+VY+ L SG++VAIK + + +RE++ + ++ H N+V L
Sbjct: 24 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--NRELQIMRKLDHCNIVRLRYF 81
Query: 129 CVEGGEQ------YLVYEFCAAG--NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
GE+ LV ++ +A+H R L + +L Y+H +
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 181 IDGCIVHRDIKLTNILL-TEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
I HRDIK N+LL + KL DFG AK L E V + Y PE +
Sbjct: 142 ---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYYRAPELIFG 196
Query: 240 AK-LTCASDIYSFGIVALQLLSGQKVIELDFDARDQL 275
A T + D++S G V +LL GQ + D DQL
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGD-SGVDQL 232
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 100/217 (46%), Gaps = 19/217 (8%)
Query: 70 DRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGC 128
D + +G GS G+VY+ L SG++VAIK + + +RE++ + ++ H N+V L
Sbjct: 25 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--NRELQIMRKLDHCNIVRLRYF 82
Query: 129 CVEGGEQ------YLVYEFCAAG--NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
GE+ LV ++ +A+H R L + +L Y+H +
Sbjct: 83 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 142
Query: 181 IDGCIVHRDIKLTNILL-TEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
I HRDIK N+LL + KL DFG AK L E V + Y PE +
Sbjct: 143 ---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYYRAPELIFG 197
Query: 240 AK-LTCASDIYSFGIVALQLLSGQKVIELDFDARDQL 275
A T + D++S G V +LL GQ + D DQL
Sbjct: 198 ATDYTSSIDVWSAGCVLAELLLGQPIFPGD-SGVDQL 233
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 100/217 (46%), Gaps = 19/217 (8%)
Query: 70 DRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGC 128
D + +G GS G+VY+ L SG++VAIK + + +RE++ + ++ H N+V L
Sbjct: 28 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--NRELQIMRKLDHCNIVRLRYF 85
Query: 129 CVEGGEQ------YLVYEFCAAG--NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
GE+ LV ++ +A+H R L + +L Y+H +
Sbjct: 86 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 145
Query: 181 IDGCIVHRDIKLTNILL-TEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
I HRDIK N+LL + KL DFG AK L E V + Y PE +
Sbjct: 146 ---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYYRAPELIFG 200
Query: 240 AK-LTCASDIYSFGIVALQLLSGQKVIELDFDARDQL 275
A T + D++S G V +LL GQ + D DQL
Sbjct: 201 ATDYTSSIDVWSAGCVLAELLLGQPIFPGD-SGVDQL 236
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 100/217 (46%), Gaps = 19/217 (8%)
Query: 70 DRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGC 128
D + +G GS G+VY+ L SG++VAIK + + +RE++ + ++ H N+V L
Sbjct: 37 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--NRELQIMRKLDHCNIVRLRYF 94
Query: 129 CVEGGEQ------YLVYEFCAAG--NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
GE+ LV ++ +A+H R L + +L Y+H +
Sbjct: 95 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 154
Query: 181 IDGCIVHRDIKLTNILL-TEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
I HRDIK N+LL + KL DFG AK L E V + Y PE +
Sbjct: 155 ---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYYRAPELIFG 209
Query: 240 AK-LTCASDIYSFGIVALQLLSGQKVIELDFDARDQL 275
A T + D++S G V +LL GQ + D DQL
Sbjct: 210 ATDYTSSIDVWSAGCVLAELLLGQPIFPGD-SGVDQL 245
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 100/217 (46%), Gaps = 19/217 (8%)
Query: 70 DRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGC 128
D + +G GS G+VY+ L SG++VAIK + + +RE++ + ++ H N+V L
Sbjct: 58 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--NRELQIMRKLDHCNIVRLRYF 115
Query: 129 CVEGGEQ------YLVYEFCAAG--NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
GE+ LV ++ +A+H R L + +L Y+H +
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 175
Query: 181 IDGCIVHRDIKLTNILL-TEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
I HRDIK N+LL + KL DFG AK L E V + Y PE +
Sbjct: 176 ---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYYRAPELIFG 230
Query: 240 AK-LTCASDIYSFGIVALQLLSGQKVIELDFDARDQL 275
A T + D++S G V +LL GQ + D DQL
Sbjct: 231 ATDYTSSIDVWSAGCVLAELLLGQPIFPGD-SGVDQL 266
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 100/217 (46%), Gaps = 19/217 (8%)
Query: 70 DRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGC 128
D + +G GS G+VY+ L SG++VAIK + + +RE++ + ++ H N+V L
Sbjct: 52 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--NRELQIMRKLDHCNIVRLRYF 109
Query: 129 CVEGGEQ------YLVYEFCAAG--NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
GE+ LV ++ +A+H R L + +L Y+H +
Sbjct: 110 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 169
Query: 181 IDGCIVHRDIKLTNILL-TEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
I HRDIK N+LL + KL DFG AK L E V + Y PE +
Sbjct: 170 ---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYYRAPELIFG 224
Query: 240 AK-LTCASDIYSFGIVALQLLSGQKVIELDFDARDQL 275
A T + D++S G V +LL GQ + D DQL
Sbjct: 225 ATDYTSSIDVWSAGCVLAELLLGQPIFPGD-SGVDQL 260
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 100/217 (46%), Gaps = 19/217 (8%)
Query: 70 DRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGC 128
D + +G GS G+VY+ L SG++VAIK + + +RE++ + ++ H N+V L
Sbjct: 36 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--NRELQIMRKLDHCNIVRLRYF 93
Query: 129 CVEGGEQ------YLVYEFCAAG--NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
GE+ LV ++ +A+H R L + +L Y+H +
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 153
Query: 181 IDGCIVHRDIKLTNILL-TEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
I HRDIK N+LL + KL DFG AK L E V + Y PE +
Sbjct: 154 ---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYYRAPELIFG 208
Query: 240 AK-LTCASDIYSFGIVALQLLSGQKVIELDFDARDQL 275
A T + D++S G V +LL GQ + D DQL
Sbjct: 209 ATDYTSSIDVWSAGCVLAELLLGQPIFPGD-SGVDQL 244
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 101/226 (44%), Gaps = 26/226 (11%)
Query: 56 FSKDEIENAINNDWDRRFLGRGSAGLVYKGVLPSGQV-------VAIKHIYKSNNTDS-- 106
+ DE E A R LG+GS G+VY+GV G V VAIK + ++ +
Sbjct: 8 YVPDEWEVAREKITMSRELGQGSFGMVYEGVA-KGVVKDEPETRVAIKTVNEAASMRERI 66
Query: 107 -FSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHL------LRKDSVL- 158
F E + ++V L G +G ++ E G+L +L + + VL
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 159 --TWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM 216
+ + +++ + A + YL+ VHRD+ N ++ E K+ DFG+ + +
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-Y 182
Query: 217 EESKVFTDVRG--TIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
E +G + +M PE + + T SD++SFG+V ++ +
Sbjct: 183 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 100/217 (46%), Gaps = 19/217 (8%)
Query: 70 DRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGC 128
D + +G GS G+VY+ L SG++VAIK + + +RE++ + ++ H N+V L
Sbjct: 29 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--NRELQIMRKLDHCNIVRLRYF 86
Query: 129 CVEGGEQ------YLVYEFCAAG--NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
GE+ LV ++ +A+H R L + +L Y+H +
Sbjct: 87 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 146
Query: 181 IDGCIVHRDIKLTNILL-TEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
I HRDIK N+LL + KL DFG AK L E V + Y PE +
Sbjct: 147 ---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYYRAPELIFG 201
Query: 240 AK-LTCASDIYSFGIVALQLLSGQKVIELDFDARDQL 275
A T + D++S G V +LL GQ + D DQL
Sbjct: 202 ATDYTSSIDVWSAGCVLAELLLGQPIFPGD-SGVDQL 237
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 100/217 (46%), Gaps = 19/217 (8%)
Query: 70 DRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGC 128
D + +G GS G+VY+ L SG++VAIK + + +RE++ + ++ H N+V L
Sbjct: 58 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--NRELQIMRKLDHCNIVRLRYF 115
Query: 129 CVEGGEQ------YLVYEFCAAG--NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
GE+ LV ++ +A+H R L + +L Y+H +
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 175
Query: 181 IDGCIVHRDIKLTNILL-TEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
I HRDIK N+LL + KL DFG AK L E V + Y PE +
Sbjct: 176 ---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYYRAPELIFG 230
Query: 240 AK-LTCASDIYSFGIVALQLLSGQKVIELDFDARDQL 275
A T + D++S G V +LL GQ + D DQL
Sbjct: 231 ATDYTSSIDVWSAGCVLAELLLGQPIFPGD-SGVDQL 266
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 13/196 (6%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIKHI----YKSNNTDSFSREVEGLSRVRHPNLVCLFGC 128
+G+G+ +V + V L +G A K I + + RE ++H N+V L
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHR 188
E G YLV++ G L + ++ ++ + I + L + H +VHR
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQ----ILEAVLHCHQMGVVHR 127
Query: 189 DIKLTNILLTEKLEP---KLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
D+K N+LL K + KL+DFGLA + ++ F GT GY+ PE +
Sbjct: 128 DLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWF-GFAGTPGYLSPEVLRKEAYGKP 186
Query: 246 SDIYSFGIVALQLLSG 261
DI++ G++ LL G
Sbjct: 187 VDIWACGVILYILLVG 202
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 100/217 (46%), Gaps = 19/217 (8%)
Query: 70 DRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGC 128
D + +G GS G+VY+ L SG++VAIK + + +RE++ + ++ H N+V L
Sbjct: 24 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK--NRELQIMRKLDHCNIVRLRYF 81
Query: 129 CVEGGEQ------YLVYEFCAAG--NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
GE+ LV ++ +A+H R L + +L Y+H +
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 181 IDGCIVHRDIKLTNILL-TEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
I HRDIK N+LL + KL DFG AK L E V + Y PE +
Sbjct: 142 ---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYYRAPELIFG 196
Query: 240 AK-LTCASDIYSFGIVALQLLSGQKVIELDFDARDQL 275
A T + D++S G V +LL GQ + D DQL
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGD-SGVDQL 232
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 101/226 (44%), Gaps = 26/226 (11%)
Query: 56 FSKDEIENAINNDWDRRFLGRGSAGLVYKGVLPSGQV-------VAIKHIYKSNNTDS-- 106
+ DE E A R LG+GS G+VY+GV G V VAIK + ++ +
Sbjct: 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVA-KGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 107 -FSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHL------LRKDSVL- 158
F E + ++V L G +G ++ E G+L +L + + VL
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 133
Query: 159 --TWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM 216
+ + +++ + A + YL+ VHRD+ N ++ E K+ DFG+ + +
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-Y 189
Query: 217 EESKVFTDVRG--TIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
E +G + +M PE + + T SD++SFG+V ++ +
Sbjct: 190 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 18/206 (8%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKS----NNTDSFSREVEGLSRVRHPNLVCL--- 125
+G G+ G+V +GQ VAIK I + N RE++ L +H N++ +
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 126 FGCCVEGGEQYLVYEFC--AAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG 183
V GE VY +L Q ++ LT E L L+Y+H
Sbjct: 123 LRPTVPYGEFKSVYVVLDLMESDLHQ-IIHSSQPLTLEHVRYFLYQLLRGLKYMH---SA 178
Query: 184 CIVHRDIKLTNILLTEKLEPKLSDFGLAKML---GMEESKVFTDVRGTIGYMDPEYMTN- 239
++HRD+K +N+L+ E E K+ DFG+A+ L E T+ T Y PE M +
Sbjct: 179 QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSL 238
Query: 240 AKLTCASDIYSFGIVALQLLSGQKVI 265
+ T A D++S G + ++L+ +++
Sbjct: 239 HEYTQAIDLWSVGCIFGEMLARRQLF 264
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 100/217 (46%), Gaps = 19/217 (8%)
Query: 70 DRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGC 128
D + +G GS G+VY+ L SG++VAIK + + +RE++ + ++ H N+V L
Sbjct: 60 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--NRELQIMRKLDHCNIVRLRYF 117
Query: 129 CVEGGEQ------YLVYEFCAAG--NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
GE+ LV ++ +A+H R L + +L Y+H +
Sbjct: 118 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 177
Query: 181 IDGCIVHRDIKLTNILL-TEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
I HRDIK N+LL + KL DFG AK L E V + Y PE +
Sbjct: 178 ---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYYRAPELIFG 232
Query: 240 AK-LTCASDIYSFGIVALQLLSGQKVIELDFDARDQL 275
A T + D++S G V +LL GQ + D DQL
Sbjct: 233 ATDYTSSIDVWSAGCVLAELLLGQPIFPGD-SGVDQL 268
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 100/217 (46%), Gaps = 19/217 (8%)
Query: 70 DRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGC 128
D + +G GS G+VY+ L SG++VAIK + + +RE++ + ++ H N+V L
Sbjct: 62 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--NRELQIMRKLDHCNIVRLRYF 119
Query: 129 CVEGGEQ------YLVYEFCAAG--NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
GE+ LV ++ +A+H R L + +L Y+H +
Sbjct: 120 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 179
Query: 181 IDGCIVHRDIKLTNILL-TEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
I HRDIK N+LL + KL DFG AK L E V + Y PE +
Sbjct: 180 ---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYYRAPELIFG 234
Query: 240 AK-LTCASDIYSFGIVALQLLSGQKVIELDFDARDQL 275
A T + D++S G V +LL GQ + D DQL
Sbjct: 235 ATDYTSSIDVWSAGCVLAELLLGQPIFPGD-SGVDQL 270
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 105/265 (39%), Gaps = 29/265 (10%)
Query: 74 LGRGSAGLVYKGVL--PSGQVVAIKH-------IYKSNNTDSFSREVEGLSRVRHPNLVC 124
LG GS G+V +G PSG+ V++ + + D F REV + + H NL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
L+G + + +V E G+L L + + A + YL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKR 131
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM-EESKVFTDVRGT-IGYMDPEYMTNAKL 242
+HRD+ N+LL + K+ DFGL + L ++ V + R + PE +
Sbjct: 132 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTF 191
Query: 243 TCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNIN 302
+ ASD + FG+ ++ + + + + L + ++ RP +D
Sbjct: 192 SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQD-------- 243
Query: 303 RADFESILKIAVLCVAKSSKGRPTI 327
I + V C A + RPT
Sbjct: 244 ------IYNVMVQCWAHKPEDRPTF 262
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 32/229 (13%)
Query: 56 FSKDEIENAINNDWDRRFLGRGSAGLVYKGVLPSGQV-------VAIKHIYKSNNTDS-- 106
+ DE E A R LG+GS G+VY+GV G V VAIK + ++ +
Sbjct: 8 YVPDEWEVAREKITMSRELGQGSFGMVYEGVA-KGVVKDEPETRVAIKTVNEAASMRERI 66
Query: 107 -FSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHL------LRKDSVL- 158
F E + ++V L G +G ++ E G+L +L + + VL
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 159 --TWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM 216
+ + +++ + A + YL+ VHRD+ N ++ E K+ DFG+ + +
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DI 181
Query: 217 EESKVFTDVRGTIG-----YMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
E+ + +G G +M PE + + T SD++SFG+V ++ +
Sbjct: 182 YETDYYR--KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 100/217 (46%), Gaps = 19/217 (8%)
Query: 70 DRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGC 128
D + +G GS G+VY+ L SG++VAIK + + +RE++ + ++ H N+V L
Sbjct: 24 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK--NRELQIMRKLDHCNIVRLRYF 81
Query: 129 CVEGGEQ------YLVYEFCAAG--NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
GE+ LV ++ +A+H R L + +L Y+H +
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 181 IDGCIVHRDIKLTNILL-TEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
I HRDIK N+LL + KL DFG AK L E V + Y PE +
Sbjct: 142 ---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYYRAPELIFG 196
Query: 240 AK-LTCASDIYSFGIVALQLLSGQKVIELDFDARDQL 275
A T + D++S G V +LL GQ + D DQL
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGD-SGVDQL 232
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 14/175 (8%)
Query: 94 AIKHIYKSN-NTDSFSR---EVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQ 149
AIK I K++ +T S S+ EV L + HPN++ L+ + YLV E G L
Sbjct: 66 AIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFD 125
Query: 150 HLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP---KLS 206
++ + + V I++ + YLH + IVHRD+K N+LL K + K+
Sbjct: 126 EIIHRMKFNEVDAAV-IIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIV 181
Query: 207 DFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
DFGL+ + E K + GT Y+ PE + K D++S G++ LL+G
Sbjct: 182 DFGLSAVF--ENQKKMKERLGTAYYIAPEVL-RKKYDEKCDVWSIGVILFILLAG 233
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 106/230 (46%), Gaps = 32/230 (13%)
Query: 65 INNDWD-RRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNNTDSFS----REVEGLSRVR 118
I++D+ + LG G+ G+V P+G++VAIK I + + F+ RE++ L +
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI-EPFDKPLFALRTLREIKILKHFK 67
Query: 119 HPNLVCLFGCCVEGG-----EQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALA 173
H N++ +F E Y++ E H + +L+ + + A
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTD---LHRVISTQMLSDDHIQYFIYQTLRA 124
Query: 174 LRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME---------ESKVFTD 224
++ LH ++HRD+K +N+L+ + K+ DFGLA+++ + T+
Sbjct: 125 VKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTE 181
Query: 225 VRGTIGYMDPEYM-TNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARD 273
T Y PE M T+AK + A D++S G + +L + + F RD
Sbjct: 182 XVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPI----FPGRD 227
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 100/217 (46%), Gaps = 19/217 (8%)
Query: 70 DRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGC 128
D + +G GS G+VY+ L SG++VAIK + + +RE++ + ++ H N+V L
Sbjct: 103 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--NRELQIMRKLDHCNIVRLRYF 160
Query: 129 CVEGGEQ------YLVYEFCAAG--NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
GE+ LV ++ +A+H R L + +L Y+H +
Sbjct: 161 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 220
Query: 181 IDGCIVHRDIKLTNILL-TEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
I HRDIK N+LL + KL DFG AK L E V + Y PE +
Sbjct: 221 ---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYYRAPELIFG 275
Query: 240 AK-LTCASDIYSFGIVALQLLSGQKVIELDFDARDQL 275
A T + D++S G V +LL GQ + D DQL
Sbjct: 276 ATDYTSSIDVWSAGCVLAELLLGQPIFPGD-SGVDQL 311
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 101/226 (44%), Gaps = 26/226 (11%)
Query: 56 FSKDEIENAINNDWDRRFLGRGSAGLVYKGVLPSGQV-------VAIKHIYKSNNTDS-- 106
+ DE E A R LG+GS G+VY+GV G V VAIK + ++ +
Sbjct: 9 YVPDEWEVAREKITMSRELGQGSFGMVYEGVA-KGVVKDEPETRVAIKTVNEAASMRERI 67
Query: 107 -FSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHL------LRKDSVL- 158
F E + ++V L G +G ++ E G+L +L + + VL
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 159 --TWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM 216
+ + +++ + A + YL+ VHRD+ N ++ E K+ DFG+ + +
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-Y 183
Query: 217 EESKVFTDVRG--TIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
E +G + +M PE + + T SD++SFG+V ++ +
Sbjct: 184 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 106/230 (46%), Gaps = 32/230 (13%)
Query: 65 INNDWD-RRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNNTDSFS----REVEGLSRVR 118
I++D+ + LG G+ G+V P+G++VAIK I + + F+ RE++ L +
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI-EPFDKPLFALRTLREIKILKHFK 67
Query: 119 HPNLVCLFG-----CCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALA 173
H N++ +F E Y++ E H + +L+ + + A
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTD---LHRVISTQMLSDDHIQYFIYQTLRA 124
Query: 174 LRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME---------ESKVFTD 224
++ LH ++HRD+K +N+L+ + K+ DFGLA+++ + T+
Sbjct: 125 VKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTE 181
Query: 225 VRGTIGYMDPEYM-TNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARD 273
T Y PE M T+AK + A D++S G + +L + + F RD
Sbjct: 182 YVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPI----FPGRD 227
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 89/189 (47%), Gaps = 16/189 (8%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYK-SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEG 132
LG G G V+ VA+K + S + ++F E + ++H LV L V
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLH-AVVTK 248
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG-CIVHRDIK 191
Y++ EF A G+L L + ++ + L D + + +I+ +HRD++
Sbjct: 249 EPIYIITEFMAKGSLLDFLKSDEGS---KQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLR 305
Query: 192 LTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSF 251
NIL++ L K++DFGLA++ + I + PE + T SD++SF
Sbjct: 306 AANILVSASLVCKIADFGLARV----------GAKFPIKWTAPEAINFGSFTIKSDVWSF 355
Query: 252 GIVALQLLS 260
GI+ +++++
Sbjct: 356 GILLMEIVT 364
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 96/211 (45%), Gaps = 27/211 (12%)
Query: 71 RRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNNTDSFS------------REVEGLSRV 117
+ LGRG + +V + + P+ + A+K I SFS +EV+ L +V
Sbjct: 22 KEILGRGVSSVVRRCIHKPTCKEYAVK-IIDVTGGGSFSAEEVQELREATLKEVDILRKV 80
Query: 118 R-HPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRY 176
HPN++ L +LV++ G L +L K ++ E R KI+R +
Sbjct: 81 SGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR-KIMRALLEVICA 139
Query: 177 LHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEY 236
LH IVHRD+K NILL + + KL+DFG + L E V GT Y+ PE
Sbjct: 140 LHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LRSVCGTPSYLAPEI 194
Query: 237 M------TNAKLTCASDIYSFGIVALQLLSG 261
+ + D++S G++ LL+G
Sbjct: 195 IECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 117/297 (39%), Gaps = 65/297 (21%)
Query: 72 RFLGRGSAGLVYKGVL------PSGQVVAIK---HIYKSNNTDSFSREVEGLSRVRHPNL 122
R LG G+ G VY+G + PS VA+K + + F E +S++ H N+
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNI 96
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLR------KDSVLTWERRVKILRDCALALRY 176
V G ++ ++++ E A G+L L + S L + + RD A +Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 177 L--HHYIDGCIVHRDIKLTNILLT---EKLEPKLSDFGLAK-MLGMEESKVFTDVRGTIG 230
L +H+I HRDI N LLT K+ DFG+A+ + + +
Sbjct: 157 LEENHFI-----HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 211
Query: 231 YMDPEYMTNAKLTCASDIYSFGIVALQLL----------SGQKVIELDFDARDQLTRKAR 280
+M PE T +D +SFG++ ++ S Q+V+E
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF------------- 258
Query: 281 DVSMGKR--PIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEID 335
V+ G R P K+ P + +I C + RP ++ E I+
Sbjct: 259 -VTSGGRMDPPKNCPGP-------------VYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 97/207 (46%), Gaps = 16/207 (7%)
Query: 74 LGRGSAGLVYK------GVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFG 127
LG G G V+K G+ + +++ + + + + E+ ++++ H NL+ L+
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGM---KDKEEVKNEISVMNQLDHANLIQLYD 153
Query: 128 CCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVH 187
+ LV E+ G L ++ + LT + ++ +R++H I+H
Sbjct: 154 AFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY---ILH 210
Query: 188 RDIKLTNILLTEK--LEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA 245
D+K NIL + + K+ DFGLA+ E K+ + GT ++ PE + ++
Sbjct: 211 LDLKPENILCVNRDAKQIKIIDFGLARRYKPRE-KLKVNF-GTPEFLAPEVVNYDFVSFP 268
Query: 246 SDIYSFGIVALQLLSGQKVIELDFDAR 272
+D++S G++A LLSG D DA
Sbjct: 269 TDMWSVGVIAYMLLSGLSPFLGDNDAE 295
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 104/265 (39%), Gaps = 29/265 (10%)
Query: 74 LGRGSAGLVYKGVL--PSGQVVAIKH-------IYKSNNTDSFSREVEGLSRVRHPNLVC 124
LG GS G+V +G PSG+ V++ + + D F REV + + H NL+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
L+G + + +V E G+L L + + A + YL
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKR 135
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK-VFTDVRGT-IGYMDPEYMTNAKL 242
+HRD+ N+LL + K+ DFGL + L + V + R + PE +
Sbjct: 136 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF 195
Query: 243 TCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNIN 302
+ ASD + FG+ ++ + + + + L + ++ RP +D
Sbjct: 196 SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQD-------- 247
Query: 303 RADFESILKIAVLCVAKSSKGRPTI 327
I + V C A + RPT
Sbjct: 248 ------IYNVMVQCWAHKPEDRPTF 266
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 101/226 (44%), Gaps = 26/226 (11%)
Query: 56 FSKDEIENAINNDWDRRFLGRGSAGLVYKGVLPSGQV-------VAIKHIYKSNNTDS-- 106
+ DE E A R LG+GS G+VY+GV G V VAIK + ++ +
Sbjct: 5 YVPDEWEVAREKITMSRELGQGSFGMVYEGVA-KGVVKDEPETRVAIKTVNEAASMRERI 63
Query: 107 -FSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHL------LRKDSVL- 158
F E + ++V L G +G ++ E G+L +L + + VL
Sbjct: 64 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 123
Query: 159 --TWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM 216
+ + +++ + A + YL+ VHRD+ N ++ E K+ DFG+ + +
Sbjct: 124 PPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-Y 179
Query: 217 EESKVFTDVRG--TIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
E +G + +M PE + + T SD++SFG+V ++ +
Sbjct: 180 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 26/223 (11%)
Query: 59 DEIENAINNDWDRRFLGRGSAGLVYKGVLPSGQV-------VAIKHIYKSNNTDS---FS 108
DE E A R LG+GS G+VY+GV G V VAIK + ++ + F
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVA-KGVVKDEPETRVAIKTVNEAASMRERIEFL 63
Query: 109 REVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHL------LRKDSVL---T 159
E + ++V L G +G ++ E G+L +L + + VL +
Sbjct: 64 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 123
Query: 160 WERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES 219
+ +++ + A + YL+ VHRD+ N ++ E K+ DFG+ + + E
Sbjct: 124 LSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETD 179
Query: 220 KVFTDVRG--TIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
+G + +M PE + + T SD++SFG+V ++ +
Sbjct: 180 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 101/226 (44%), Gaps = 26/226 (11%)
Query: 56 FSKDEIENAINNDWDRRFLGRGSAGLVYKGVLPSGQV-------VAIKHIYKSNNTDS-- 106
+ DE E A R LG+GS G+VY+GV G V VAIK + ++ +
Sbjct: 37 YVPDEWEVAREKITMSRELGQGSFGMVYEGVA-KGVVKDEPETRVAIKTVNEAASMRERI 95
Query: 107 -FSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHL------LRKDSVL- 158
F E + ++V L G +G ++ E G+L +L + + VL
Sbjct: 96 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 155
Query: 159 --TWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM 216
+ + +++ + A + YL+ VHRD+ N ++ E K+ DFG+ + +
Sbjct: 156 PPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-Y 211
Query: 217 EESKVFTDVRG--TIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
E +G + +M PE + + T SD++SFG+V ++ +
Sbjct: 212 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 105/265 (39%), Gaps = 29/265 (10%)
Query: 74 LGRGSAGLVYKGVL--PSGQVVAIKH-------IYKSNNTDSFSREVEGLSRVRHPNLVC 124
LG GS G+V +G PSG+ V++ + + D F REV + + H NL+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
L+G + + +V E G+L L + + A + YL
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKR 141
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM-EESKVFTDVRGT-IGYMDPEYMTNAKL 242
+HRD+ N+LL + K+ DFGL + L ++ V + R + PE +
Sbjct: 142 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTF 201
Query: 243 TCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNIN 302
+ ASD + FG+ ++ + + + + L + ++ RP +D
Sbjct: 202 SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQD-------- 253
Query: 303 RADFESILKIAVLCVAKSSKGRPTI 327
I + V C A + RPT
Sbjct: 254 ------IYNVMVQCWAHKPEDRPTF 272
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 105/265 (39%), Gaps = 29/265 (10%)
Query: 74 LGRGSAGLVYKGVL--PSGQVVAIKH-------IYKSNNTDSFSREVEGLSRVRHPNLVC 124
LG GS G+V +G PSG+ V++ + + D F REV + + H NL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
L+G + + +V E G+L L + + A + YL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKR 131
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM-EESKVFTDVRGT-IGYMDPEYMTNAKL 242
+HRD+ N+LL + K+ DFGL + L ++ V + R + PE +
Sbjct: 132 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF 191
Query: 243 TCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNIN 302
+ ASD + FG+ ++ + + + + L + ++ RP +D
Sbjct: 192 SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQD-------- 243
Query: 303 RADFESILKIAVLCVAKSSKGRPTI 327
I + V C A + RPT
Sbjct: 244 ------IYNVMVQCWAHKPEDRPTF 262
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 117/297 (39%), Gaps = 65/297 (21%)
Query: 72 RFLGRGSAGLVYKGVL------PSGQVVAIK---HIYKSNNTDSFSREVEGLSRVRHPNL 122
R LG G+ G VY+G + PS VA+K + + F E +S++ H N+
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNI 110
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLR------KDSVLTWERRVKILRDCALALRY 176
V G ++ ++++ E A G+L L + S L + + RD A +Y
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 177 L--HHYIDGCIVHRDIKLTNILLT---EKLEPKLSDFGLAK-MLGMEESKVFTDVRGTIG 230
L +H+I HRDI N LLT K+ DFG+A+ + + +
Sbjct: 171 LEENHFI-----HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 231 YMDPEYMTNAKLTCASDIYSFGIVALQLL----------SGQKVIELDFDARDQLTRKAR 280
+M PE T +D +SFG++ ++ S Q+V+E
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF------------- 272
Query: 281 DVSMGKR--PIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEID 335
V+ G R P K+ P + +I C + RP ++ E I+
Sbjct: 273 -VTSGGRMDPPKNCPGP-------------VYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 16/212 (7%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G V + SG+ VAIK + + ++ F+ RE+ L ++H N++ L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTW-ERRVKILRDCAL-ALRYLHHYIDGCIV 186
Y+F Q L+K L + E +++ L L L+Y+H +V
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIH---SAGVV 148
Query: 187 HRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN-AKLTCA 245
HRD+K N+ + E E K+ DFGLA+ E T T Y PE + +
Sbjct: 149 HRDLKPGNLAVNEDCELKILDFGLARHADAE----MTGYVVTRWYRAPEVILSWMHYNQT 204
Query: 246 SDIYSFGIVALQLLSGQKVIELDFDARDQLTR 277
DI+S G + ++L+G+ + + D DQLT+
Sbjct: 205 VDIWSVGCIMAEMLTGKTLFKGK-DYLDQLTQ 235
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 105/265 (39%), Gaps = 29/265 (10%)
Query: 74 LGRGSAGLVYKGVL--PSGQVVAIKH-------IYKSNNTDSFSREVEGLSRVRHPNLVC 124
LG GS G+V +G PSG+ V++ + + D F REV + + H NL+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
L+G + + +V E G+L L + + A + YL
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKR 135
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM-EESKVFTDVRGT-IGYMDPEYMTNAKL 242
+HRD+ N+LL + K+ DFGL + L ++ V + R + PE +
Sbjct: 136 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF 195
Query: 243 TCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNIN 302
+ ASD + FG+ ++ + + + + L + ++ RP +D
Sbjct: 196 SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQD-------- 247
Query: 303 RADFESILKIAVLCVAKSSKGRPTI 327
I + V C A + RPT
Sbjct: 248 ------IYNVMVQCWAHKPEDRPTF 266
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 105/265 (39%), Gaps = 29/265 (10%)
Query: 74 LGRGSAGLVYKGVL--PSGQVVAIKH-------IYKSNNTDSFSREVEGLSRVRHPNLVC 124
LG GS G+V +G PSG+ V++ + + D F REV + + H NL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
L+G + + +V E G+L L + + A + YL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKR 131
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM-EESKVFTDVRGT-IGYMDPEYMTNAKL 242
+HRD+ N+LL + K+ DFGL + L ++ V + R + PE +
Sbjct: 132 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF 191
Query: 243 TCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNIN 302
+ ASD + FG+ ++ + + + + L + ++ RP +D
Sbjct: 192 SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQD-------- 243
Query: 303 RADFESILKIAVLCVAKSSKGRPTI 327
I + V C A + RPT
Sbjct: 244 ------IYNVMVQCWAHKPEDRPTF 262
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 100/229 (43%), Gaps = 32/229 (13%)
Query: 57 SKDEIEN----AINNDWDRRFL------GRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTD 105
+D+IE A+ D RFL GRGS VYKG+ V VA + T
Sbjct: 7 QQDDIEELETKAVGXSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTK 66
Query: 106 S----FSREVEGLSRVRHPNLVCLFGC---CVEGGEQ-YLVYEFCAAGNLAQHLLRKDSV 157
S F E E L ++HPN+V + V+G + LV E +G L +L R
Sbjct: 67 SERQRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVX 126
Query: 158 LTWERRVKILRD-CALALRYLH--HYIDGCIVHRDIKLTNILLTEKL-EPKLSDFGLAKM 213
++K+LR C L+ L H I+HRD+K NI +T K+ D GLA +
Sbjct: 127 -----KIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181
Query: 214 LGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQ 262
+K V GT + PE K + D+Y+FG L+ + +
Sbjct: 182 KRASFAKA---VIGTPEFXAPEXY-EEKYDESVDVYAFGXCXLEXATSE 226
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 27/204 (13%)
Query: 74 LGRGSAGLVYKG--VLPSGQVVAIKHIYKSNNTDSFS----REV---EGLSRVRHPNLVC 124
+G G+ G V+K + G+ VA+K + + REV L HPN+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 125 LFGCCV-----EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCAL----ALR 175
LF C + LV+E +L +L D V + ++D L
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL---DKVPEPGVPTETIKDMMFQLLRGLD 134
Query: 176 YLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPE 235
+LH + +VHRD+K NIL+T + KL+DFGLA++ + + T V T+ Y PE
Sbjct: 135 FLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYRAPE 189
Query: 236 YMTNAKLTCASDIYSFGIVALQLL 259
+ + D++S G + ++
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 98/222 (44%), Gaps = 28/222 (12%)
Query: 74 LGRGSAGLVYKG--VLPSGQVVAIKHIYKSNNTDSFS----REV---EGLSRVRHPNLVC 124
+G G+ G V+K + G+ VA+K + + REV L HPN+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 125 LFGCCV-----EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCAL----ALR 175
LF C + LV+E +L +L D V + ++D L
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL---DKVPEPGVPTETIKDMMFQLLRGLD 134
Query: 176 YLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPE 235
+LH + +VHRD+K NIL+T + KL+DFGLA++ + + T V T+ Y PE
Sbjct: 135 FLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYRAPE 189
Query: 236 YMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTR 277
+ + D++S G + ++ + + D DQL +
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGK 230
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 105/265 (39%), Gaps = 29/265 (10%)
Query: 74 LGRGSAGLVYKGVL--PSGQVVAIKH-------IYKSNNTDSFSREVEGLSRVRHPNLVC 124
LG GS G+V +G PSG+ V++ + + D F REV + + H NL+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
L+G + + +V E G+L L + + A + YL
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKR 141
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM-EESKVFTDVRGT-IGYMDPEYMTNAKL 242
+HRD+ N+LL + K+ DFGL + L ++ V + R + PE +
Sbjct: 142 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF 201
Query: 243 TCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNIN 302
+ ASD + FG+ ++ + + + + L + ++ RP +D
Sbjct: 202 SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQD-------- 253
Query: 303 RADFESILKIAVLCVAKSSKGRPTI 327
I + V C A + RPT
Sbjct: 254 ------IYNVMVQCWAHKPEDRPTF 272
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 32/229 (13%)
Query: 56 FSKDEIENAINNDWDRRFLGRGSAGLVYKGVLPSGQV-------VAIKHIYKSNNTDS-- 106
+ DE E A R LG+GS G+VY+GV G V VAIK + ++ +
Sbjct: 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVA-KGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 107 -FSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHL------LRKDSVL- 158
F E + ++V L G +G ++ E G+L +L + + VL
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 133
Query: 159 --TWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM 216
+ + +++ + A + YL+ VHRD+ N ++ E K+ DFG+ + +
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DI 188
Query: 217 EESKVFTDVRGTIG-----YMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
E+ + +G G +M PE + + T SD++SFG+V ++ +
Sbjct: 189 YETDYYR--KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 27/204 (13%)
Query: 74 LGRGSAGLVYKG--VLPSGQVVAIKHIYKSNNTDSFS----REV---EGLSRVRHPNLVC 124
+G G+ G V+K + G+ VA+K + + REV L HPN+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 125 LFGCCV-----EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCAL----ALR 175
LF C + LV+E +L +L D V + ++D L
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL---DKVPEPGVPTETIKDMMFQLLRGLD 134
Query: 176 YLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPE 235
+LH + +VHRD+K NIL+T + KL+DFGLA++ + + T V T+ Y PE
Sbjct: 135 FLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYRAPE 189
Query: 236 YMTNAKLTCASDIYSFGIVALQLL 259
+ + D++S G + ++
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 116/297 (39%), Gaps = 65/297 (21%)
Query: 72 RFLGRGSAGLVYKGVL------PSGQVVAIK---HIYKSNNTDSFSREVEGLSRVRHPNL 122
R LG G+ G VY+G + PS VA+K + + F E +S+ H N+
Sbjct: 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 95
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLR------KDSVLTWERRVKILRDCALALRY 176
V G ++ ++++ E A G+L L + S L + + RD A +Y
Sbjct: 96 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 177 L--HHYIDGCIVHRDIKLTNILLT---EKLEPKLSDFGLAK-MLGMEESKVFTDVRGTIG 230
L +H+I HRDI N LLT K+ DFG+A+ + + +
Sbjct: 156 LEENHFI-----HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 210
Query: 231 YMDPEYMTNAKLTCASDIYSFGIVALQLL----------SGQKVIELDFDARDQLTRKAR 280
+M PE T +D +SFG++ ++ S Q+V+E
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF------------- 257
Query: 281 DVSMGKR--PIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEID 335
V+ G R P K+ P + +I C + RP ++ E I+
Sbjct: 258 -VTSGGRMDPPKNCPGP-------------VYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 116/297 (39%), Gaps = 65/297 (21%)
Query: 72 RFLGRGSAGLVYKGVL------PSGQVVAIK---HIYKSNNTDSFSREVEGLSRVRHPNL 122
R LG G+ G VY+G + PS VA+K + + F E +S+ H N+
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 96
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLR------KDSVLTWERRVKILRDCALALRY 176
V G ++ ++++ E A G+L L + S L + + RD A +Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 177 L--HHYIDGCIVHRDIKLTNILLT---EKLEPKLSDFGLAK-MLGMEESKVFTDVRGTIG 230
L +H+I HRDI N LLT K+ DFG+A+ + + +
Sbjct: 157 LEENHFI-----HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 211
Query: 231 YMDPEYMTNAKLTCASDIYSFGIVALQLL----------SGQKVIELDFDARDQLTRKAR 280
+M PE T +D +SFG++ ++ S Q+V+E
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF------------- 258
Query: 281 DVSMGKR--PIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEID 335
V+ G R P K+ P + +I C + RP ++ E I+
Sbjct: 259 -VTSGGRMDPPKNCPGP-------------VYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 116/297 (39%), Gaps = 65/297 (21%)
Query: 72 RFLGRGSAGLVYKGVL------PSGQVVAIK---HIYKSNNTDSFSREVEGLSRVRHPNL 122
R LG G+ G VY+G + PS VA+K + + F E +S+ H N+
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 96
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLR------KDSVLTWERRVKILRDCALALRY 176
V G ++ ++++ E A G+L L + S L + + RD A +Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 177 L--HHYIDGCIVHRDIKLTNILLT---EKLEPKLSDFGLAK-MLGMEESKVFTDVRGTIG 230
L +H+I HRDI N LLT K+ DFG+A+ + + +
Sbjct: 157 LEENHFI-----HRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVK 211
Query: 231 YMDPEYMTNAKLTCASDIYSFGIVALQLL----------SGQKVIELDFDARDQLTRKAR 280
+M PE T +D +SFG++ ++ S Q+V+E
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF------------- 258
Query: 281 DVSMGKR--PIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEID 335
V+ G R P K+ P + +I C + RP ++ E I+
Sbjct: 259 -VTSGGRMDPPKNCPGP-------------VYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 116/297 (39%), Gaps = 65/297 (21%)
Query: 72 RFLGRGSAGLVYKGVL------PSGQVVAIK---HIYKSNNTDSFSREVEGLSRVRHPNL 122
R LG G+ G VY+G + PS VA+K + + F E +S+ H N+
Sbjct: 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 95
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLR------KDSVLTWERRVKILRDCALALRY 176
V G ++ ++++ E A G+L L + S L + + RD A +Y
Sbjct: 96 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 177 L--HHYIDGCIVHRDIKLTNILLT---EKLEPKLSDFGLAK-MLGMEESKVFTDVRGTIG 230
L +H+I HRDI N LLT K+ DFG+A+ + + +
Sbjct: 156 LEENHFI-----HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 210
Query: 231 YMDPEYMTNAKLTCASDIYSFGIVALQLL----------SGQKVIELDFDARDQLTRKAR 280
+M PE T +D +SFG++ ++ S Q+V+E
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF------------- 257
Query: 281 DVSMGKR--PIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEID 335
V+ G R P K+ P + +I C + RP ++ E I+
Sbjct: 258 -VTSGGRMDPPKNCPGP-------------VYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 116/297 (39%), Gaps = 65/297 (21%)
Query: 72 RFLGRGSAGLVYKGVL------PSGQVVAIK---HIYKSNNTDSFSREVEGLSRVRHPNL 122
R LG G+ G VY+G + PS VA+K + + F E +S+ H N+
Sbjct: 43 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 102
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLR------KDSVLTWERRVKILRDCALALRY 176
V G ++ ++++ E A G+L L + S L + + RD A +Y
Sbjct: 103 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 162
Query: 177 L--HHYIDGCIVHRDIKLTNILLT---EKLEPKLSDFGLAK-MLGMEESKVFTDVRGTIG 230
L +H+I HRDI N LLT K+ DFG+A+ + + +
Sbjct: 163 LEENHFI-----HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 217
Query: 231 YMDPEYMTNAKLTCASDIYSFGIVALQLL----------SGQKVIELDFDARDQLTRKAR 280
+M PE T +D +SFG++ ++ S Q+V+E
Sbjct: 218 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF------------- 264
Query: 281 DVSMGKR--PIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEID 335
V+ G R P K+ P + +I C + RP ++ E I+
Sbjct: 265 -VTSGGRMDPPKNCPGP-------------VYRIMTQCWQHQPEDRPNFAIILERIE 307
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 16/204 (7%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV----C 124
++G G+ G+V +V VAIK I + R E++ L R RH N++
Sbjct: 30 YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 89
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
+ +E + + + +L + L K L+ + L L+Y+H
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH---SAN 144
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKML--GMEESKVFTDVRGTIGYMDPEYMTNAK- 241
++HRD+K +N+LL + K+ DFGLA++ + + T+ T Y PE M N+K
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 242 LTCASDIYSFGIVALQLLSGQKVI 265
T + DI+S G + ++LS + +
Sbjct: 205 YTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 116/297 (39%), Gaps = 65/297 (21%)
Query: 72 RFLGRGSAGLVYKGVL------PSGQVVAIK---HIYKSNNTDSFSREVEGLSRVRHPNL 122
R LG G+ G VY+G + PS VA+K + + F E +S+ H N+
Sbjct: 63 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 122
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLR------KDSVLTWERRVKILRDCALALRY 176
V G ++ ++++ E A G+L L + S L + + RD A +Y
Sbjct: 123 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 182
Query: 177 L--HHYIDGCIVHRDIKLTNILLT---EKLEPKLSDFGLAK-MLGMEESKVFTDVRGTIG 230
L +H+I HRDI N LLT K+ DFG+A+ + + +
Sbjct: 183 LEENHFI-----HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 237
Query: 231 YMDPEYMTNAKLTCASDIYSFGIVALQLL----------SGQKVIELDFDARDQLTRKAR 280
+M PE T +D +SFG++ ++ S Q+V+E
Sbjct: 238 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF------------- 284
Query: 281 DVSMGKR--PIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEID 335
V+ G R P K+ P + +I C + RP ++ E I+
Sbjct: 285 -VTSGGRMDPPKNCPGP-------------VYRIMTQCWQHQPEDRPNFAIILERIE 327
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 116/297 (39%), Gaps = 65/297 (21%)
Query: 72 RFLGRGSAGLVYKGVL------PSGQVVAIK---HIYKSNNTDSFSREVEGLSRVRHPNL 122
R LG G+ G VY+G + PS VA+K + + F E +S+ H N+
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 110
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLR------KDSVLTWERRVKILRDCALALRY 176
V G ++ ++++ E A G+L L + S L + + RD A +Y
Sbjct: 111 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 177 L--HHYIDGCIVHRDIKLTNILLT---EKLEPKLSDFGLAK-MLGMEESKVFTDVRGTIG 230
L +H+I HRDI N LLT K+ DFG+A+ + + +
Sbjct: 171 LEENHFI-----HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 231 YMDPEYMTNAKLTCASDIYSFGIVALQLL----------SGQKVIELDFDARDQLTRKAR 280
+M PE T +D +SFG++ ++ S Q+V+E
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF------------- 272
Query: 281 DVSMGKR--PIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEID 335
V+ G R P K+ P + +I C + RP ++ E I+
Sbjct: 273 -VTSGGRMDPPKNCPGP-------------VYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 116/297 (39%), Gaps = 65/297 (21%)
Query: 72 RFLGRGSAGLVYKGVL------PSGQVVAIK---HIYKSNNTDSFSREVEGLSRVRHPNL 122
R LG G+ G VY+G + PS VA+K + + F E +S+ H N+
Sbjct: 28 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 87
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLR------KDSVLTWERRVKILRDCALALRY 176
V G ++ ++++ E A G+L L + S L + + RD A +Y
Sbjct: 88 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 147
Query: 177 L--HHYIDGCIVHRDIKLTNILLT---EKLEPKLSDFGLAK-MLGMEESKVFTDVRGTIG 230
L +H+I HRDI N LLT K+ DFG+A+ + + +
Sbjct: 148 LEENHFI-----HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 202
Query: 231 YMDPEYMTNAKLTCASDIYSFGIVALQLL----------SGQKVIELDFDARDQLTRKAR 280
+M PE T +D +SFG++ ++ S Q+V+E
Sbjct: 203 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF------------- 249
Query: 281 DVSMGKR--PIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEID 335
V+ G R P K+ P + +I C + RP ++ E I+
Sbjct: 250 -VTSGGRMDPPKNCPGP-------------VYRIMTQCWQHQPEDRPNFAIILERIE 292
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 16/204 (7%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV----C 124
++G G+ G+V +V VAIK I + R E++ L R RH N++
Sbjct: 34 YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDI 93
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
+ +E + + + +L + L K L+ + L L+Y+H
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH---SAN 148
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKML--GMEESKVFTDVRGTIGYMDPEYMTNAK- 241
++HRD+K +N+LL + K+ DFGLA++ + + T+ T Y PE M N+K
Sbjct: 149 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 242 LTCASDIYSFGIVALQLLSGQKVI 265
T + DI+S G + ++LS + +
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 16/204 (7%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV----C 124
++G G+ G+V +V VAIK I + R E++ L R RH N++
Sbjct: 30 YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 89
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
+ +E + + + +L + L K L+ + L L+Y+H
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH---SAN 144
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKML--GMEESKVFTDVRGTIGYMDPEYMTNAK- 241
++HRD+K +N+LL + K+ DFGLA++ + + T+ T Y PE M N+K
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 242 LTCASDIYSFGIVALQLLSGQKVI 265
T + DI+S G + ++LS + +
Sbjct: 205 YTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 26/210 (12%)
Query: 72 RFLGRGSAGLVYKGVL------PSGQVVAIK---HIYKSNNTDSFSREVEGLSRVRHPNL 122
R LG G+ G VY+G + PS VA+K + + F E +S+ H N+
Sbjct: 53 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 112
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLR------KDSVLTWERRVKILRDCALALRY 176
V G ++ ++++ E A G+L L + S L + + RD A +Y
Sbjct: 113 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 172
Query: 177 L--HHYIDGCIVHRDIKLTNILLT---EKLEPKLSDFGLAK-MLGMEESKVFTDVRGTIG 230
L +H+I HRDI N LLT K+ DFG+A+ + + +
Sbjct: 173 LEENHFI-----HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 227
Query: 231 YMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
+M PE T +D +SFG++ ++ S
Sbjct: 228 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLVCL--- 125
++G G+ G+V +V VAIK I + R E++ L R RH N++ +
Sbjct: 50 YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 109
Query: 126 --FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG 183
+ + YLV A + L K L+ + L L+Y+H
Sbjct: 110 IRAPTIEQMKDVYLVTHLMGAD---LYKLLKTQHLSNDHICYFLYQILRGLKYIH---SA 163
Query: 184 CIVHRDIKLTNILLTEKLEPKLSDFGLAKML--GMEESKVFTDVRGTIGYMDPEYMTNAK 241
++HRD+K +N+LL + K+ DFGLA++ + + T+ T Y PE M N+K
Sbjct: 164 NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 223
Query: 242 -LTCASDIYSFGIVALQLLSGQKVI 265
T + DI+S G + ++LS + +
Sbjct: 224 GYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 16/204 (7%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV----C 124
++G G+ G+V +V VAIK I + R E++ L R RH N++
Sbjct: 30 YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 89
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
+ +E + + + +L + L K L+ + L L+Y+H
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH---SAN 144
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKML--GMEESKVFTDVRGTIGYMDPEYMTNAK- 241
++HRD+K +N+LL + K+ DFGLA++ + + T+ T Y PE M N+K
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 242 LTCASDIYSFGIVALQLLSGQKVI 265
T + DI+S G + ++LS + +
Sbjct: 205 YTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 100/226 (44%), Gaps = 26/226 (11%)
Query: 56 FSKDEIENAINNDWDRRFLGRGSAGLVYKGVLPSGQV-------VAIKHIYKSNNTDS-- 106
+ DE E A R LG+GS G+VY+GV G V VAIK + ++ +
Sbjct: 2 YVPDEWEVAREKITMSRELGQGSFGMVYEGVA-KGVVKDEPETRVAIKTVNEAASMRERI 60
Query: 107 -FSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHL------LRKDSVL- 158
F E + ++V L G +G ++ E G+L +L + + VL
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 159 --TWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM 216
+ + +++ + A + YL+ VHRD+ N + E K+ DFG+ + +
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCXVAEDFTVKIGDFGMTRDI-Y 176
Query: 217 EESKVFTDVRG--TIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
E +G + +M PE + + T SD++SFG+V ++ +
Sbjct: 177 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 118/301 (39%), Gaps = 73/301 (24%)
Query: 72 RFLGRGSAGLVYKGVL------PSGQVVAIK---HIYKSNNTDSFSREVEGLSRVRHPNL 122
R LG G+ G VY+G + PS VA+K + + F E +S+ H N+
Sbjct: 54 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 113
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLR------KDSVLTWERRVKILRDCALALRY 176
V G ++ ++++ E A G+L L + S L + + RD A +Y
Sbjct: 114 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 173
Query: 177 L--HHYIDGCIVHRDIKLTNILLT---EKLEPKLSDFGLAKMLGMEESKVFTDVRG---- 227
L +H+I HRDI N LLT K+ DFG+A+ + + +G
Sbjct: 174 LEENHFI-----HRDIAARNCLLTCPGPGRVAKIGDFGMARDI----YRAGYYRKGGCAM 224
Query: 228 -TIGYMDPEYMTNAKLTCASDIYSFGIVALQLL----------SGQKVIELDFDARDQLT 276
+ +M PE T +D +SFG++ ++ S Q+V+E
Sbjct: 225 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF--------- 275
Query: 277 RKARDVSMGKR--PIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEI 334
V+ G R P K+ P + +I C + RP ++ E I
Sbjct: 276 -----VTSGGRMDPPKNCPGP-------------VYRIMTQCWQHQPEDRPNFAIILERI 317
Query: 335 D 335
+
Sbjct: 318 E 318
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 118/301 (39%), Gaps = 73/301 (24%)
Query: 72 RFLGRGSAGLVYKGVL------PSGQVVAIK---HIYKSNNTDSFSREVEGLSRVRHPNL 122
R LG G+ G VY+G + PS VA+K + + F E +S+ H N+
Sbjct: 77 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 136
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLR------KDSVLTWERRVKILRDCALALRY 176
V G ++ ++++ E A G+L L + S L + + RD A +Y
Sbjct: 137 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 196
Query: 177 L--HHYIDGCIVHRDIKLTNILLT---EKLEPKLSDFGLAKMLGMEESKVFTDVRG---- 227
L +H+I HRDI N LLT K+ DFG+A+ + + +G
Sbjct: 197 LEENHFI-----HRDIAARNCLLTCPGPGRVAKIGDFGMARDI----YRAGYYRKGGCAM 247
Query: 228 -TIGYMDPEYMTNAKLTCASDIYSFGIVALQLL----------SGQKVIELDFDARDQLT 276
+ +M PE T +D +SFG++ ++ S Q+V+E
Sbjct: 248 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF--------- 298
Query: 277 RKARDVSMGKR--PIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEI 334
V+ G R P K+ P + +I C + RP ++ E I
Sbjct: 299 -----VTSGGRMDPPKNCPGP-------------VYRIMTQCWQHQPEDRPNFAIILERI 340
Query: 335 D 335
+
Sbjct: 341 E 341
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 95/207 (45%), Gaps = 20/207 (9%)
Query: 72 RFLGRGSAGLV---YKGVLPSGQVVAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV-- 123
+++G G+ G+V Y V + VAIK I + R E++ L R RH N++
Sbjct: 49 QYIGEGAYGMVSSAYDHVRKTR--VAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGI 106
Query: 124 --CLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYI 181
L +E + + +L + L K L+ + L L+Y+H
Sbjct: 107 RDILRASTLEAMRDVYIVQDLMETDLYK--LLKSQQLSNDHICYFLYQILRGLKYIH--- 161
Query: 182 DGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKV--FTDVRGTIGYMDPEYMTN 239
++HRD+K +N+L+ + K+ DFGLA++ E T+ T Y PE M N
Sbjct: 162 SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLN 221
Query: 240 AK-LTCASDIYSFGIVALQLLSGQKVI 265
+K T + DI+S G + ++LS + +
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 16/212 (7%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G V + SG+ VAIK + + ++ F+ RE+ L ++H N++ L
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTW-ERRVKILRDCAL-ALRYLHHYIDGCIV 186
Y+F Q L+K + + E +++ L L L+Y+H +V
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIH---SAGVV 166
Query: 187 HRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN-AKLTCA 245
HRD+K N+ + E E K+ DFGLA+ E T T Y PE + +
Sbjct: 167 HRDLKPGNLAVNEDCELKILDFGLARHADAE----MTGYVVTRWYRAPEVILSWMHYNQT 222
Query: 246 SDIYSFGIVALQLLSGQKVIELDFDARDQLTR 277
DI+S G + ++L+G+ + + D DQLT+
Sbjct: 223 VDIWSVGCIMAEMLTGKTLFKGK-DYLDQLTQ 253
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 81/159 (50%), Gaps = 15/159 (9%)
Query: 110 EVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKI-LR 168
E+E L ++ HP ++ + + + Y+V E G L ++ + E K+
Sbjct: 204 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLK--EATCKLYFY 260
Query: 169 DCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP---KLSDFGLAKMLGMEESKVFTDV 225
LA++YLH + I+HRD+K N+LL+ + E K++DFG +K+LG E+ + +
Sbjct: 261 QMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTL 315
Query: 226 RGTIGYMDPEYMTN---AKLTCASDIYSFGIVALQLLSG 261
GT Y+ PE + + A A D +S G++ LSG
Sbjct: 316 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 16/204 (7%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV----C 124
++G G+ G+V +V VAIK I + R E++ L R RH N++
Sbjct: 30 YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 89
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
+ +E + + + +L + L K L+ + L L+Y+H
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH---SAN 144
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKML--GMEESKVFTDVRGTIGYMDPEYMTNAK- 241
++HRD+K +N+LL + K+ DFGLA++ + + T+ T Y PE M N+K
Sbjct: 145 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 242 LTCASDIYSFGIVALQLLSGQKVI 265
T + DI+S G + ++LS + +
Sbjct: 205 YTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 81/159 (50%), Gaps = 15/159 (9%)
Query: 110 EVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKI-LR 168
E+E L ++ HP ++ + + + Y+V E G L ++ + E K+
Sbjct: 190 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLK--EATCKLYFY 246
Query: 169 DCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP---KLSDFGLAKMLGMEESKVFTDV 225
LA++YLH + I+HRD+K N+LL+ + E K++DFG +K+LG E+ + +
Sbjct: 247 QMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTL 301
Query: 226 RGTIGYMDPEYMTN---AKLTCASDIYSFGIVALQLLSG 261
GT Y+ PE + + A A D +S G++ LSG
Sbjct: 302 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 16/204 (7%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV----C 124
++G G+ G+V +V VAIK I + R E++ L R RH N++
Sbjct: 32 YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 91
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
+ +E + + + +L + L K L+ + L L+Y+H
Sbjct: 92 IRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH---SAN 146
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKML--GMEESKVFTDVRGTIGYMDPEYMTNAK- 241
++HRD+K +N+LL + K+ DFGLA++ + + T+ T Y PE M N+K
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 242 LTCASDIYSFGIVALQLLSGQKVI 265
T + DI+S G + ++LS + +
Sbjct: 207 YTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 93/209 (44%), Gaps = 25/209 (11%)
Query: 71 RRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNN--------TDSFS-----REVEGLSRV 117
+RF+ GS G V GV G VAIK ++ + + +DSF RE+ L+
Sbjct: 27 QRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF 86
Query: 118 RHPNLVCLFGCCVEGGEQ-----YLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCAL 172
HPN++ L V E YLV E +LAQ + + V++ + + L
Sbjct: 87 HHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQHIQYFMYHILL 145
Query: 173 ALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYM 232
L LH + +VHRD+ NILL + + + DF LA+ + +K T Y
Sbjct: 146 GLHVLH---EAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANK--THYVTHRWYR 200
Query: 233 DPEYMTNAK-LTCASDIYSFGIVALQLLS 260
PE + K T D++S G V ++ +
Sbjct: 201 APELVMQFKGFTKLVDMWSAGCVMAEMFN 229
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 93/209 (44%), Gaps = 25/209 (11%)
Query: 71 RRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNN--------TDSFS-----REVEGLSRV 117
+RF+ GS G V GV G VAIK ++ + + +DSF RE+ L+
Sbjct: 27 QRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF 86
Query: 118 RHPNLVCLFGCCVEGGEQ-----YLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCAL 172
HPN++ L V E YLV E +LAQ + + V++ + + L
Sbjct: 87 HHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQHIQYFMYHILL 145
Query: 173 ALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYM 232
L LH + +VHRD+ NILL + + + DF LA+ + +K T Y
Sbjct: 146 GLHVLH---EAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANK--THYVTHRWYR 200
Query: 233 DPEYMTNAK-LTCASDIYSFGIVALQLLS 260
PE + K T D++S G V ++ +
Sbjct: 201 APELVMQFKGFTKLVDMWSAGCVMAEMFN 229
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 16/204 (7%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV----C 124
++G G+ G+V +V VAIK I + R E++ L R RH N++
Sbjct: 38 YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 97
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
+ +E + + + +L + L K L+ + L L+Y+H
Sbjct: 98 IRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH---SAN 152
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKML--GMEESKVFTDVRGTIGYMDPEYMTNAK- 241
++HRD+K +N+LL + K+ DFGLA++ + + T+ T Y PE M N+K
Sbjct: 153 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 212
Query: 242 LTCASDIYSFGIVALQLLSGQKVI 265
T + DI+S G + ++LS + +
Sbjct: 213 YTKSIDIWSVGCILAEMLSNRPIF 236
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 16/204 (7%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV----C 124
++G G+ G+V +V VAIK I + R E++ L R RH N++
Sbjct: 30 YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 89
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
+ +E + + + +L + L K L+ + L L+Y+H
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH---SAN 144
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKML--GMEESKVFTDVRGTIGYMDPEYMTNAK- 241
++HRD+K +N+LL + K+ DFGLA++ + + T+ T Y PE M N+K
Sbjct: 145 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 242 LTCASDIYSFGIVALQLLSGQKVI 265
T + DI+S G + ++LS + +
Sbjct: 205 YTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 89/180 (49%), Gaps = 15/180 (8%)
Query: 89 SGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLA 148
S + AI +++ + E+E L ++ HP ++ + + + Y+V E G L
Sbjct: 44 SKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELF 102
Query: 149 QHLLRKDSVLTWERRVKI-LRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP---K 204
++ + E K+ LA++YLH + I+HRD+K N+LL+ + E K
Sbjct: 103 DKVVGNKRLK--EATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIK 157
Query: 205 LSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN---AKLTCASDIYSFGIVALQLLSG 261
++DFG +K+LG E+ + + GT Y+ PE + + A A D +S G++ LSG
Sbjct: 158 ITDFGHSKILG--ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 126/274 (45%), Gaps = 50/274 (18%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRV--RHPNLVCLFGCCV- 130
+G+G G V++G G+ VA+K I+ S + S+ RE E + V RH N++ +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVK-IFSSRDEKSWFRETELYNTVMLRHENILGFIASDMT 73
Query: 131 ---EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG---- 183
+ +L+ + G+L +L + + L ++I+ A L +LH I G
Sbjct: 74 SRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGK 131
Query: 184 -CIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK--VFTDVR-GTIGYMDPEYMTN 239
I HRD+K NIL+ + + ++D GLA M ++ V + R GT YM PE +
Sbjct: 132 PAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDE 191
Query: 240 A-KLTCAS-----DIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFE 293
++ C DI++FG+V ++ AR R VS G ++D++
Sbjct: 192 TIQVDCFDSYKRVDIWAFGLVLWEV------------AR-------RMVSNGI--VEDYK 230
Query: 294 DPRLNGNINRADFESILKIAVLCVAKSSKGRPTI 327
P + N FE + K V+CV + RP I
Sbjct: 231 PPFYDVVPNDPSFEDMRK--VVCV---DQQRPNI 259
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 32/213 (15%)
Query: 72 RFLGRGSAGLVYKGV---LPSGQV---VAIKHIYKSNNTDSFSREVEGLSRVR------- 118
R LG+GS G+VY+G + G+ VA+K + N + S +E L+
Sbjct: 20 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTV---NESASLRERIEFLNEASVMKGFTC 76
Query: 119 HPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHL--LRKDS-------VLTWERRVKILRD 169
H ++V L G +G +V E A G+L +L LR ++ T + +++ +
Sbjct: 77 H-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 135
Query: 170 CALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRG-- 227
A + YL+ VHRD+ N ++ K+ DFG+ + + E +G
Sbjct: 136 IADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI-XETDXXRKGGKGLL 191
Query: 228 TIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
+ +M PE + + T +SD++SFG+V ++ S
Sbjct: 192 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 107/232 (46%), Gaps = 36/232 (15%)
Query: 65 INNDWD-RRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNNTDSFS----REVEGLSRVR 118
I++D+ + LG G+ G+V P+G++VAIK I + + F+ RE++ L +
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI-EPFDKPLFALRTLREIKILKHFK 67
Query: 119 HPNLVCLFG-----CCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALA 173
H N++ +F E Y++ E H + +L+ + + A
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTD---LHRVISTQMLSDDHIQYFIYQTLRA 124
Query: 174 LRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKML-----------GMEESKVF 222
++ LH ++HRD+K +N+L+ + K+ DFGLA+++ G + V
Sbjct: 125 VKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMV- 180
Query: 223 TDVRGTIGYMDPEYM-TNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARD 273
+ T Y PE M T+AK + A D++S G + +L + + F RD
Sbjct: 181 -EFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPI----FPGRD 227
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 89/180 (49%), Gaps = 15/180 (8%)
Query: 89 SGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLA 148
S + AI +++ + E+E L ++ HP ++ + + + Y+V E G L
Sbjct: 44 SKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELF 102
Query: 149 QHLLRKDSVLTWERRVKI-LRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP---K 204
++ + E K+ LA++YLH + I+HRD+K N+LL+ + E K
Sbjct: 103 DKVVGNKRLK--EATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIK 157
Query: 205 LSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN---AKLTCASDIYSFGIVALQLLSG 261
++DFG +K+LG E+ + + GT Y+ PE + + A A D +S G++ LSG
Sbjct: 158 ITDFGHSKILG--ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 126/274 (45%), Gaps = 50/274 (18%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRV--RHPNLVCLFGCCV- 130
+G+G G V++G G+ VA+K I+ S + S+ RE E + V RH N++ +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVK-IFSSRDEKSWFRETELYNTVMLRHENILGFIASDMT 73
Query: 131 ---EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG---- 183
+ +L+ + G+L +L + + L ++I+ A L +LH I G
Sbjct: 74 SRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGK 131
Query: 184 -CIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK--VFTDVR-GTIGYMDPEYMTN 239
I HRD+K NIL+ + + ++D GLA M ++ V + R GT YM PE +
Sbjct: 132 PAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDE 191
Query: 240 A-KLTCAS-----DIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFE 293
++ C DI++FG+V ++ AR R VS G ++D++
Sbjct: 192 TIQVDCFDSYKRVDIWAFGLVLWEV------------AR-------RMVSNGI--VEDYK 230
Query: 294 DPRLNGNINRADFESILKIAVLCVAKSSKGRPTI 327
P + N FE + K V+CV + RP I
Sbjct: 231 PPFYDVVPNDPSFEDMRK--VVCV---DQQRPNI 259
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 16/204 (7%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV----C 124
++G G+ G+V +V VAIK I + R E++ L R RH N++
Sbjct: 34 YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
+ +E + + + +L + L K L+ + L L+Y+H
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH---SAN 148
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKML--GMEESKVFTDVRGTIGYMDPEYMTNAK- 241
++HRD+K +N+LL + K+ DFGLA++ + + T+ T Y PE M N+K
Sbjct: 149 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 242 LTCASDIYSFGIVALQLLSGQKVI 265
T + DI+S G + ++LS + +
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 32/213 (15%)
Query: 72 RFLGRGSAGLVYKGV---LPSGQV---VAIKHIYKSNNTDSFSREVEGLSRVR------- 118
R LG+GS G+VY+G + G+ VA+K + N + S +E L+
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTV---NESASLRERIEFLNEASVMKGFTC 79
Query: 119 HPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHL--LRKDS-------VLTWERRVKILRD 169
H ++V L G +G +V E A G+L +L LR ++ T + +++ +
Sbjct: 80 H-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 170 CALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRG-- 227
A + YL+ VHRD+ N ++ K+ DFG+ + + E +G
Sbjct: 139 IADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI-XETDXXRKGGKGLL 194
Query: 228 TIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
+ +M PE + + T +SD++SFG+V ++ S
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 89/180 (49%), Gaps = 15/180 (8%)
Query: 89 SGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLA 148
S + AI +++ + E+E L ++ HP ++ + + + Y+V E G L
Sbjct: 50 SKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELF 108
Query: 149 QHLLRKDSVLTWERRVKI-LRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP---K 204
++ + E K+ LA++YLH + I+HRD+K N+LL+ + E K
Sbjct: 109 DKVVGNKRLK--EATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIK 163
Query: 205 LSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN---AKLTCASDIYSFGIVALQLLSG 261
++DFG +K+LG E+ + + GT Y+ PE + + A A D +S G++ LSG
Sbjct: 164 ITDFGHSKILG--ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 89/180 (49%), Gaps = 15/180 (8%)
Query: 89 SGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLA 148
S + AI +++ + E+E L ++ HP ++ + + + Y+V E G L
Sbjct: 43 SKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELF 101
Query: 149 QHLLRKDSVLTWERRVKI-LRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP---K 204
++ + E K+ LA++YLH + I+HRD+K N+LL+ + E K
Sbjct: 102 DKVVGNKRLK--EATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIK 156
Query: 205 LSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN---AKLTCASDIYSFGIVALQLLSG 261
++DFG +K+LG E+ + + GT Y+ PE + + A A D +S G++ LSG
Sbjct: 157 ITDFGHSKILG--ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 89/180 (49%), Gaps = 15/180 (8%)
Query: 89 SGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLA 148
S + AI +++ + E+E L ++ HP ++ + + + Y+V E G L
Sbjct: 44 SKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELF 102
Query: 149 QHLLRKDSVLTWERRVKI-LRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP---K 204
++ + E K+ LA++YLH + I+HRD+K N+LL+ + E K
Sbjct: 103 DKVVGNKRLK--EATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIK 157
Query: 205 LSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN---AKLTCASDIYSFGIVALQLLSG 261
++DFG +K+LG E+ + + GT Y+ PE + + A A D +S G++ LSG
Sbjct: 158 ITDFGHSKILG--ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 16/204 (7%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV----C 124
++G G+ G+V +V VAIK I + R E++ L R RH N++
Sbjct: 50 YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 109
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
+ +E + + + +L + L K L+ + L L+Y+H
Sbjct: 110 IRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH---SAN 164
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKML--GMEESKVFTDVRGTIGYMDPEYMTNAK- 241
++HRD+K +N+LL + K+ DFGLA++ + + T+ T Y PE M N+K
Sbjct: 165 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 224
Query: 242 LTCASDIYSFGIVALQLLSGQKVI 265
T + DI+S G + ++LS + +
Sbjct: 225 YTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 16/204 (7%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV----C 124
++G G+ G+V +V VAIK I + R E++ L R RH N++
Sbjct: 28 YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 87
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
+ +E + + + +L + L K L+ + L L+Y+H
Sbjct: 88 IRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH---SAN 142
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKML--GMEESKVFTDVRGTIGYMDPEYMTNAK- 241
++HRD+K +N+LL + K+ DFGLA++ + + T+ T Y PE M N+K
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 202
Query: 242 LTCASDIYSFGIVALQLLSGQKVI 265
T + DI+S G + ++LS + +
Sbjct: 203 YTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 16/204 (7%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV----C 124
++G G+ G+V +V VAIK I + R E++ L R RH N++
Sbjct: 35 YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 94
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
+ +E + + + +L + L K L+ + L L+Y+H
Sbjct: 95 IRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH---SAN 149
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKML--GMEESKVFTDVRGTIGYMDPEYMTNAK- 241
++HRD+K +N+LL + K+ DFGLA++ + + T+ T Y PE M N+K
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 209
Query: 242 LTCASDIYSFGIVALQLLSGQKVI 265
T + DI+S G + ++LS + +
Sbjct: 210 YTKSIDIWSVGCILAEMLSNRPIF 233
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 16/204 (7%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV----C 124
++G G+ G+V +V VAIK I + R E++ L R RH N++
Sbjct: 28 YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 87
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
+ +E + + + +L + L K L+ + L L+Y+H
Sbjct: 88 IRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH---SAN 142
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKML--GMEESKVFTDVRGTIGYMDPEYMTNAK- 241
++HRD+K +N+LL + K+ DFGLA++ + + T+ T Y PE M N+K
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 202
Query: 242 LTCASDIYSFGIVALQLLSGQKVI 265
T + DI+S G + ++LS + +
Sbjct: 203 YTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 16/204 (7%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV----C 124
++G G+ G+V +V VAIK I + R E++ L R RH N++
Sbjct: 36 YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 95
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
+ +E + + + +L + L K L+ + L L+Y+H
Sbjct: 96 IRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH---SAN 150
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKML--GMEESKVFTDVRGTIGYMDPEYMTNAK- 241
++HRD+K +N+LL + K+ DFGLA++ + + T+ T Y PE M N+K
Sbjct: 151 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 210
Query: 242 LTCASDIYSFGIVALQLLSGQKVI 265
T + DI+S G + ++LS + +
Sbjct: 211 YTKSIDIWSVGCILAEMLSNRPIF 234
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 16/204 (7%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV----C 124
++G G+ G+V +V VAIK I + R E++ L R RH N++
Sbjct: 27 YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 86
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
+ +E + + + +L + L K L+ + L L+Y+H
Sbjct: 87 IRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH---SAN 141
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKML--GMEESKVFTDVRGTIGYMDPEYMTNAK- 241
++HRD+K +N+LL + K+ DFGLA++ + + T+ T Y PE M N+K
Sbjct: 142 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 201
Query: 242 LTCASDIYSFGIVALQLLSGQKVI 265
T + DI+S G + ++LS + +
Sbjct: 202 YTKSIDIWSVGCILAEMLSNRPIF 225
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 16/204 (7%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV----C 124
++G G+ G+V +V VAIK I + R E++ L R RH N++
Sbjct: 34 YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
+ +E + + + +L + L K L+ + L L+Y+H
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH---SAN 148
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKML--GMEESKVFTDVRGTIGYMDPEYMTNAK- 241
++HRD+K +N+LL + K+ DFGLA++ + + T+ T Y PE M N+K
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 242 LTCASDIYSFGIVALQLLSGQKVI 265
T + DI+S G + ++LS + +
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 32/213 (15%)
Query: 72 RFLGRGSAGLVYKGV---LPSGQV---VAIKHIYKSNNTDSFSREVEGLSRVR------- 118
R LG+GS G+VY+G + G+ VA+K + N + S +E L+
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTV---NESASLRERIEFLNEASVMKGFTC 79
Query: 119 HPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHL--LRKDS-------VLTWERRVKILRD 169
H ++V L G +G +V E A G+L +L LR ++ T + +++ +
Sbjct: 80 H-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 170 CALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRG-- 227
A + YL+ VHRD+ N ++ K+ DFG+ + + E +G
Sbjct: 139 IADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI-XETDXXRKGGKGLL 194
Query: 228 TIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
+ +M PE + + T +SD++SFG+V ++ S
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 47/223 (21%)
Query: 64 AINNDWD--RRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRH- 119
A+ +D+ ++ LG G G V + +GQ A+K +Y S +EV+ +
Sbjct: 6 AVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKA---RQEVDHHWQASGG 62
Query: 120 PNLVCLFGC----------------CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERR 163
P++VC+ C+EGGE + ++ R D T
Sbjct: 63 PHIVCILDVYENMHHGKRCLLIIMECMEGGELF-----------SRIQERGDQAFTEREA 111
Query: 164 VKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP---KLSDFGLAKMLGME--E 218
+I+RD A+++LH + I HRD+K N+L T K + KL+DFG AK +
Sbjct: 112 AEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQ 168
Query: 219 SKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+ +T Y+ PE + K + D++S G++ LL G
Sbjct: 169 TPCYTPY-----YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 206
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 24/201 (11%)
Query: 74 LGRGSAGLV---YKGVLPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLF 126
+G G+ G+V Y +L VAIK + + + + RE+ + V H N++ L
Sbjct: 32 IGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 127 GCCV------EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + Y+V E A NL+Q + + L ER +L + +++LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDA-NLSQVIQME---LDHERMSYLLYQMLVGIKHLH-- 143
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNA 240
I+HRD+K +NI++ K+ DFGLA+ G S + T T Y PE +
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGM 200
Query: 241 KLTCASDIYSFGIVALQLLSG 261
DI+S G++ +++ G
Sbjct: 201 GYKENVDIWSVGVIMGEMIKG 221
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 47/223 (21%)
Query: 64 AINNDWD--RRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFSREVEGLSRVRH- 119
A+ +D+ ++ LG G G V + +GQ A+K +Y S +EV+ +
Sbjct: 25 AVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKA---RQEVDHHWQASGG 81
Query: 120 PNLVCLFGC----------------CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERR 163
P++VC+ C+EGGE + ++ R D T
Sbjct: 82 PHIVCILDVYENMHHGKRCLLIIMECMEGGELF-----------SRIQERGDQAFTEREA 130
Query: 164 VKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP---KLSDFGLAKMLGME--E 218
+I+RD A+++LH + I HRD+K N+L T K + KL+DFG AK +
Sbjct: 131 AEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQ 187
Query: 219 SKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+ +T Y+ PE + K + D++S G++ LL G
Sbjct: 188 TPCYTPY-----YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 225
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 126/274 (45%), Gaps = 50/274 (18%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRV--RHPNLVCLFGCCV- 130
+G+G G V++G G+ VA+K I+ S + S+ RE E + V RH N++ +
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVK-IFSSRDEKSWFRETELYNTVMLRHENILGFIASDMT 102
Query: 131 ---EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG---- 183
+ +L+ + G+L +L + + L ++I+ A L +LH I G
Sbjct: 103 SRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGK 160
Query: 184 -CIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK--VFTDVR-GTIGYMDPEYMTN 239
I HRD+K NIL+ + + ++D GLA M ++ V + R GT YM PE +
Sbjct: 161 PAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDE 220
Query: 240 A-KLTCAS-----DIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFE 293
++ C DI++FG+V ++ AR R VS G ++D++
Sbjct: 221 TIQVDCFDSYKRVDIWAFGLVLWEV------------AR-------RMVSNGI--VEDYK 259
Query: 294 DPRLNGNINRADFESILKIAVLCVAKSSKGRPTI 327
P + N FE + K V+CV + RP I
Sbjct: 260 PPFYDVVPNDPSFEDMRK--VVCVDQQ---RPNI 288
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 32/213 (15%)
Query: 72 RFLGRGSAGLVYKGV---LPSGQV---VAIKHIYKSNNTDSFSREVEGLSRVR------- 118
R LG+GS G+VY+G + G+ VA+K + N + S +E L+
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTV---NESASLRERIEFLNEASVMKGFTC 79
Query: 119 HPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHL--LRKDS-------VLTWERRVKILRD 169
H ++V L G +G +V E A G+L +L LR ++ T + +++ +
Sbjct: 80 H-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 170 CALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRG-- 227
A + YL+ VHRD+ N ++ K+ DFG+ + + E + +G
Sbjct: 139 IADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI-YETAYYRKGGKGLL 194
Query: 228 TIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
+ +M PE + + T +SD++SFG+V ++ S
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 109 REVEGLSRVRHPNLVCLFGCCVEGGEQ--YLVYEFCAAGNLAQHLLRKDSVLTWERRVKI 166
+E+ L ++ HPN+V L + E Y+V+E G + + K L+ ++
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP--LSEDQARFY 142
Query: 167 LRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVR 226
+D + YLH+ I+HRDIK +N+L+ E K++DFG++ ++ + ++
Sbjct: 143 FQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTV 198
Query: 227 GTIGYMDPEYMTNAKLTC---ASDIYSFGIVALQLLSGQ 262
GT +M PE ++ + A D+++ G+ + GQ
Sbjct: 199 GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 17/198 (8%)
Query: 74 LGRGSAGLVYKGVLPS-GQVVAIKHIYKSNNTD----SFSREVEGLSRVRH-PNLVCLFG 127
LGRG +V + + S GQ A K + K E+ L + P ++ L
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE 96
Query: 128 CCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRV-KILRDCALALRYLHHYIDGCIV 186
E L+ E+ A G + L + + + E V ++++ + YLH IV
Sbjct: 97 VYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQ---NNIV 153
Query: 187 HRDIKLTNILLTEKLEP----KLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKL 242
H D+K NILL+ + P K+ DFG+++ +G + ++ GT Y+ PE + +
Sbjct: 154 HLDLKPQNILLS-SIYPLGDIKIVDFGMSRKIG--HACELREIMGTPEYLAPEILNYDPI 210
Query: 243 TCASDIYSFGIVALQLLS 260
T A+D+++ GI+A LL+
Sbjct: 211 TTATDMWNIGIIAYMLLT 228
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 24/201 (11%)
Query: 74 LGRGSAGLV---YKGVLPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLF 126
+G G+ G+V Y +L VAIK + + + + RE+ + V H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 127 GCCV------EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + Y+V E A NL+Q + + L ER +L + +++LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDA-NLSQVIQME---LDHERMSYLLYQMLVGIKHLH-- 143
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNA 240
I+HRD+K +NI++ K+ DFGLA+ G S + T T Y PE +
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGM 200
Query: 241 KLTCASDIYSFGIVALQLLSG 261
DI+S G++ +++ G
Sbjct: 201 GYKENVDIWSVGVIMGEMIKG 221
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 93/197 (47%), Gaps = 10/197 (5%)
Query: 74 LGRGSAGLVYKGVLP-SGQVVAIKHI---YKSNNTDSFSREVEGLSRVRHPNLVCLFGCC 129
LG G+ VYKG + +VA+K I ++ + REV L ++H N+V L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 130 VEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRD 189
LV+E+ +L Q+L +++ L L Y H ++HRD
Sbjct: 70 HTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHR---QKVLHRD 125
Query: 190 IKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAK-LTCASDI 248
+K N+L+ E+ E KL+DFGLA+ + +K + + T+ Y P+ + + + D+
Sbjct: 126 LKPQNLLINERGELKLADFGLARAKSI-PTKTYDNEVVTLWYRPPDILLGSTDYSTQIDM 184
Query: 249 YSFGIVALQLLSGQKVI 265
+ G + ++ +G+ +
Sbjct: 185 WGVGCIFYEMATGRPLF 201
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 32/213 (15%)
Query: 72 RFLGRGSAGLVYKGV---LPSGQV---VAIKHIYKSNNTDSFSREVEGLSRVR------- 118
R LG+GS G+VY+G + G+ VA+K + N + S +E L+
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTV---NESASLRERIEFLNEASVMKGFTC 79
Query: 119 HPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHL--LRKDS-------VLTWERRVKILRD 169
H ++V L G +G +V E A G+L +L LR ++ T + +++ +
Sbjct: 80 H-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 170 CALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRG-- 227
A + YL+ VHRD+ N ++ K+ DFG+ + + E +G
Sbjct: 139 IADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI-YETDYYRKGGKGLL 194
Query: 228 TIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
+ +M PE + + T +SD++SFG+V ++ S
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 39/224 (17%)
Query: 72 RFLGRGSAG-LVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVR-HPNLVCLFGCC 129
+ LG GS+G +V++G G+ VA+K + + D E++ L+ HPN++ + C
Sbjct: 21 KILGYGSSGTVVFQGSF-QGRPVAVKRML-IDFCDIALMEIKLLTESDDHPNVIRYY--C 76
Query: 130 VEGGEQ--YLVYEFCAAG--NLAQHLLRKDSVLTWERR---VKILRDCALALRYLHHYID 182
E ++ Y+ E C +L + D L ++ + +LR A + +LH
Sbjct: 77 SETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL-- 134
Query: 183 GCIVHRDIKLTNILLT-------------EKLEPKLSDFGLAKMLGMEESKVFTDVR--- 226
I+HRD+K NIL++ E L +SDFGL K L +S T++
Sbjct: 135 -KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPS 193
Query: 227 GTIGYMDPEYM-------TNAKLTCASDIYSFGIVALQLLSGQK 263
GT G+ PE + T +LT + DI+S G V +LS K
Sbjct: 194 GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGK 237
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTC 244
IV+RD+K NILL + ++SD GLA + + E + GT+GYM PE + N + T
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGRVGTVGYMAPEVVKNERYTF 364
Query: 245 ASDIYSFGIVALQLLSGQKVIE 266
+ D ++ G + ++++GQ +
Sbjct: 365 SPDWWALGCLLYEMIAGQSPFQ 386
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 91/198 (45%), Gaps = 18/198 (9%)
Query: 74 LGRGSAG--LVYKGVLPSGQVVAIKHIYKSN-----NTDSFSREVEGLSRVRHPNLVCLF 126
LG G+ G L+ K L +G AIK I KS+ N+ + EV L ++ HPN++ L+
Sbjct: 12 LGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 70
Query: 127 GCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIV 186
+ YLV E G L ++ + + V I++ YLH + IV
Sbjct: 71 EFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV-IMKQVLSGTTYLHKH---NIV 126
Query: 187 HRDIKLTNILLTEKLEP---KLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLT 243
HRD+K N+LL K K+ DFGL+ E + GT Y+ PE + K
Sbjct: 127 HRDLKPENLLLESKSRDALIKIVDFGLSAHF--EVGGKMKERLGTAYYIAPEVL-RKKYD 183
Query: 244 CASDIYSFGIVALQLLSG 261
D++S G++ LL G
Sbjct: 184 EKCDVWSCGVILYILLCG 201
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 36/213 (16%)
Query: 72 RFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFS-REVEG-------LSRVRHPNLV 123
+ LG G G V +G L ++K K+ D+ S RE+E + HPN++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 124 CLFGCCVEGGEQ-----YLVYEFCAAGNLAQHLLRK-----DSVLTWERRVKILRDCALA 173
L G C+E Q ++ F G+L +LL + + +K + D AL
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 174 LRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD---VRGTIG 230
+ YL + +HRD+ N +L + + ++DFGL+K K+++ +G I
Sbjct: 160 MEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSK-------KIYSGDYYRQGRIA 209
Query: 231 YMDPEYMTNAKL-----TCASDIYSFGIVALQL 258
M +++ L T SD+++FG+ ++
Sbjct: 210 KMPVKWIAIESLADRVYTSKSDVWAFGVTMWEI 242
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 16/204 (7%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV----C 124
++G G+ G+V +V VAI+ I + R E++ L R RH N++
Sbjct: 34 YIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
+ +E + + + +L + L K L+ + L L+Y+H
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH---SAN 148
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKML--GMEESKVFTDVRGTIGYMDPEYMTNAK- 241
++HRD+K +N+LL + K+ DFGLA++ + + T+ T Y PE M N+K
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 242 LTCASDIYSFGIVALQLLSGQKVI 265
T + DI+S G + ++LS + +
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTC 244
IV+RD+K NILL + ++SD GLA + + E + GT+GYM PE + N + T
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGRVGTVGYMAPEVVKNERYTF 364
Query: 245 ASDIYSFGIVALQLLSGQKVIE 266
+ D ++ G + ++++GQ +
Sbjct: 365 SPDWWALGCLLYEMIAGQSPFQ 386
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 91/198 (45%), Gaps = 18/198 (9%)
Query: 74 LGRGSAG--LVYKGVLPSGQVVAIKHIYKSN-----NTDSFSREVEGLSRVRHPNLVCLF 126
LG G+ G L+ K L +G AIK I KS+ N+ + EV L ++ HPN++ L+
Sbjct: 29 LGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 87
Query: 127 GCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIV 186
+ YLV E G L ++ + + V I++ YLH + IV
Sbjct: 88 EFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV-IMKQVLSGTTYLHKH---NIV 143
Query: 187 HRDIKLTNILLTEKLEP---KLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLT 243
HRD+K N+LL K K+ DFGL+ E + GT Y+ PE + K
Sbjct: 144 HRDLKPENLLLESKSRDALIKIVDFGLSAHF--EVGGKMKERLGTAYYIAPEVL-RKKYD 200
Query: 244 CASDIYSFGIVALQLLSG 261
D++S G++ LL G
Sbjct: 201 EKCDVWSCGVILYILLCG 218
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Query: 118 RHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYL 177
+ P L L C Y V E+ G+L H+ ++ + V + ++ L +L
Sbjct: 78 KPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHI-QQVGKFKEPQAVFYAAEISIGLFFL 136
Query: 178 HHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYM 237
H I++RD+KL N++L + K++DFG+ K M + + GT Y+ PE +
Sbjct: 137 HKR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE-HMMDGVTTREFCGTPDYIAPEII 192
Query: 238 TNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQ 274
+ D +++G++ ++L+GQ FD D+
Sbjct: 193 AYQPYGKSVDWWAYGVLLYEMLAGQP----PFDGEDE 225
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 32/213 (15%)
Query: 72 RFLGRGSAGLVYKGV---LPSGQV---VAIKHIYKSNNTDSFSREVEGLSRVR------- 118
R LG+GS G+VY+G + G+ VA+K + N + S +E L+
Sbjct: 22 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTV---NESASLRERIEFLNEASVMKGFTC 78
Query: 119 HPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHL--LRKDS-------VLTWERRVKILRD 169
H ++V L G +G +V E A G+L +L LR ++ T + +++ +
Sbjct: 79 H-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 137
Query: 170 CALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRG-- 227
A + YL+ VHRD+ N ++ K+ DFG+ + + E +G
Sbjct: 138 IADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI-YETDYYRKGGKGLL 193
Query: 228 TIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
+ +M PE + + T +SD++SFG+V ++ S
Sbjct: 194 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 16/204 (7%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV----C 124
++G G+ G+V +V VAIK I + R E++ L R RH N++
Sbjct: 34 YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
+ +E + + + +L + L K L+ + L L+Y+H
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYK--LLKCQHLSNDHICYFLYQILRGLKYIH---SAN 148
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKML--GMEESKVFTDVRGTIGYMDPEYMTNAK- 241
++HRD+K +N+LL + K+ DFGLA++ + + T+ T Y PE M N+K
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 242 LTCASDIYSFGIVALQLLSGQKVI 265
T + DI+S G + ++LS + +
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 9/192 (4%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSF--SREVEGLSRVRHPNLVCLFGCCVE 131
LGRG G+V++ V S + + K TD +E+ L+ RH N++ L
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFES 72
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIK 191
E +++EF + ++ + + L V + AL++LH + G H DI+
Sbjct: 73 MEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIG---HFDIR 129
Query: 192 LTNILLTEKLEP--KLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIY 249
NI+ + K+ +FG A+ L ++ F + Y PE + ++ A+D++
Sbjct: 130 PENIIYQTRRSSTIKIIEFGQARQLKPGDN--FRLLFTAPEYYAPEVHQHDVVSTATDMW 187
Query: 250 SFGIVALQLLSG 261
S G + LLSG
Sbjct: 188 SLGTLVYVLLSG 199
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 94/217 (43%), Gaps = 37/217 (17%)
Query: 73 FLGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRV---RHPNLVCLF--- 126
+GRG G VYKG L + VA+K ++ N +F E + + RV H N+
Sbjct: 20 LIGRGRYGAVYKGSLDE-RPVAVK-VFSFANRQNFINE-KNIYRVPLMEHDNIARFIVGD 76
Query: 127 -GCCVEGGEQYL-VYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLH------ 178
+G +YL V E+ G+L ++L S W ++ L YLH
Sbjct: 77 ERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS--DWVSSCRLAHSVTRGLAYLHTELPRG 134
Query: 179 -HYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKML--------GMEESKVFTDVRGTI 229
HY I HRD+ N+L+ +SDFGL+ L G E++ ++V GTI
Sbjct: 135 DHY-KPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEV-GTI 192
Query: 230 GYMDPEYMTNA-------KLTCASDIYSFGIVALQLL 259
YM PE + A D+Y+ G++ ++
Sbjct: 193 RYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 106/256 (41%), Gaps = 32/256 (12%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSF-SREVEGLSRVRHPNLVCLFGCCVEG 132
LGRGS G V++ + + K + F + E+ + + P +V L+G EG
Sbjct: 101 LGRGSFGEVHRM---EDKQTGFQCAVKKVRLEVFRAEELMACAGLTSPRIVPLYGAVREG 157
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKL 192
+ E G+L Q L+++ L +R + L L YLH I+H D+K
Sbjct: 158 PWVNIFMELLEGGSLGQ-LVKEQGCLPEDRALYYLGQALEGLEYLHSRR---ILHGDVKA 213
Query: 193 TNILLT-EKLEPKLSDFGLAKML---GMEESKVFTD-VRGTIGYMDPEYMTNAKLTCASD 247
N+LL+ + L DFG A L G+ +S + D + GT +M PE + D
Sbjct: 214 DNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVD 273
Query: 248 IYSFGIVALQLLSG-------------QKVIELDFDARD------QLTRKARDVSMGKRP 288
++S + L +L+G K+ R+ LT +A + K P
Sbjct: 274 VWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQEGLRKEP 333
Query: 289 IKDFEDPRLNGNINRA 304
I L G +NRA
Sbjct: 334 IHRVSAAELGGKVNRA 349
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 103/224 (45%), Gaps = 28/224 (12%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRV--RHPNLVCLFGCCVE 131
+G+G G V+ G G+ VA+K ++ + S+ RE E V RH N++ ++
Sbjct: 45 IGKGRYGEVWMGKW-RGEKVAVK-VFFTTEEASWFRETEIYQTVLMRHENILGFIAADIK 102
Query: 132 GG----EQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYI-----D 182
G + YL+ ++ G+L +L K + L + +K+ L +LH I
Sbjct: 103 GTGSWTQLYLITDYHENGSLYDYL--KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGK 160
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLA-KMLG-MEESKVFTDVR-GTIGYMDPEYMTN 239
I HRD+K NIL+ + ++D GLA K + E + + R GT YM PE +
Sbjct: 161 PAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDE 220
Query: 240 A------KLTCASDIYSFGI----VALQLLSGQKVIELDFDARD 273
+ + +D+YSFG+ VA + +SG V E D
Sbjct: 221 SLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHD 264
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV----C 124
++G G+ G+V +V VAIK I + R E++ L R RH N++
Sbjct: 34 YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
+ +E + + + +L + L K L+ + L L+Y+H
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH---SAN 148
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKML--GMEESKVFTDVRGTIGYMDPEYMTNAK- 241
++HRD+K +N+LL + K+ DFGLA++ + + + T Y PE M N+K
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKG 208
Query: 242 LTCASDIYSFGIVALQLLSGQKVI 265
T + DI+S G + ++LS + +
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV----C 124
++G G+ G+V +V VAIK I + R E++ L R RH N++
Sbjct: 35 YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 94
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
+ +E + + + +L + L K L+ + L L+Y+H
Sbjct: 95 IRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH---SAN 149
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKML--GMEESKVFTDVRGTIGYMDPEYMTNAK- 241
++HRD+K +N+LL + K+ DFGLA++ + + + T Y PE M N+K
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKG 209
Query: 242 LTCASDIYSFGIVALQLLSGQKVI 265
T + DI+S G + ++LS + +
Sbjct: 210 YTKSIDIWSVGCILAEMLSNRPIF 233
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV----C 124
++G G+ G+V +V VAIK I + R E++ L RH N++
Sbjct: 32 YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDI 91
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
+ +E + + + +L + L K L+ + L L+Y+H
Sbjct: 92 IRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH---SAN 146
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKML--GMEESKVFTDVRGTIGYMDPEYMTNAK- 241
++HRD+K +N+LL + K+ DFGLA++ + + T+ T Y PE M N+K
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 242 LTCASDIYSFGIVALQLLSGQKVI 265
T + DI+S G + ++LS + +
Sbjct: 207 YTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 102/220 (46%), Gaps = 32/220 (14%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
LG G+ G VYK + + + VAIK I + + REV L ++H N++ L
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC---- 184
+L++E+ A +L +++ + V +++++ +L+ I+G
Sbjct: 102 IHHNHRLHLIFEY-AENDLKKYMDKNPDV-----SMRVIKS------FLYQLINGVNFCH 149
Query: 185 ---IVHRDIKLTNILL-----TEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEY 236
+HRD+K N+LL +E K+ DFGLA+ G+ + FT T+ Y PE
Sbjct: 150 SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGI-PIRQFTHEIITLWYRPPEI 208
Query: 237 MTNAKLTCAS-DIYSFGIVALQLLSGQKVIELDFDARDQL 275
+ ++ S DI+S + ++L + D + DQL
Sbjct: 209 LLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI-DQL 247
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 32/213 (15%)
Query: 72 RFLGRGSAGLVYKGV---LPSGQV---VAIKHIYKSNNTDSFSREVEGLSRVR------- 118
R LG+GS G+VY+G + G+ VA+K + N + S +E L+
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTV---NESASLRERIEFLNEASVMKGFTC 79
Query: 119 HPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHL--LRKDS-------VLTWERRVKILRD 169
H ++V L G +G +V E A G+L +L LR ++ T + +++ +
Sbjct: 80 H-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 170 CALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRG-- 227
A + YL+ VHR++ N ++ K+ DFG+ + + E +G
Sbjct: 139 IADGMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDI-YETDYYRKGGKGLL 194
Query: 228 TIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
+ +M PE + + T +SD++SFG+V ++ S
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 91/201 (45%), Gaps = 24/201 (11%)
Query: 74 LGRGSAGLV---YKGVLPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLF 126
+G G+ G+V Y +L VAIK + + + + RE+ + V H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 127 GCCV------EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + Y+V E A NL+Q + + L ER +L + +++LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDA-NLSQVIQME---LDHERMSYLLYQMLVGIKHLH-- 143
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNA 240
I+HRD+K +NI++ K+ DFGLA+ G S + T T Y PE +
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGM 200
Query: 241 KLTCASDIYSFGIVALQLLSG 261
DI+S G + +++ G
Sbjct: 201 GYKENVDIWSVGCIMGEMIKG 221
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 32/213 (15%)
Query: 72 RFLGRGSAGLVYKGV---LPSGQV---VAIKHIYKSNNTDSFSREVEGLSRVR------- 118
R LG+GS G+VY+G + G+ VA+K + N + S +E L+
Sbjct: 24 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTV---NESASLRERIEFLNEASVMKGFTC 80
Query: 119 HPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHL--LRKDS-------VLTWERRVKILRD 169
H ++V L G +G +V E A G+L +L LR ++ T + +++ +
Sbjct: 81 H-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 139
Query: 170 CALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRG-- 227
A + YL+ VHR++ N ++ K+ DFG+ + + E +G
Sbjct: 140 IADGMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDI-YETDYYRKGGKGLL 195
Query: 228 TIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260
+ +M PE + + T +SD++SFG+V ++ S
Sbjct: 196 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 102/220 (46%), Gaps = 35/220 (15%)
Query: 72 RFLGRGSAG-LVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVR-HPNLVCLFGCC 129
+ LG GS+G +V++G G+ VA+K + + D E++ L+ HPN++ + C
Sbjct: 39 KILGYGSSGTVVFQGSF-QGRPVAVKRML-IDFCDIALMEIKLLTESDDHPNVIRYY--C 94
Query: 130 VEGGEQ--YLVYEFCAAG--NLAQHLLRKDSVLTWERR---VKILRDCALALRYLHHYID 182
E ++ Y+ E C +L + D L ++ + +LR A + +LH
Sbjct: 95 SETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL-- 152
Query: 183 GCIVHRDIKLTNILLT-------------EKLEPKLSDFGLAKMLGMEESKV---FTDVR 226
I+HRD+K NIL++ E L +SDFGL K L + +
Sbjct: 153 -KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPS 211
Query: 227 GTIGYMDPEYM---TNAKLTCASDIYSFGIVALQLLSGQK 263
GT G+ PE + T +LT + DI+S G V +LS K
Sbjct: 212 GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGK 251
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 28/232 (12%)
Query: 74 LGRGSAGLV---YKGVLPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLF 126
+G G+ G+V Y VL VAIK + + + + RE+ + V H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 127 GCCV------EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + YLV E A NL Q + + L ER +L +++LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDA-NLXQVIQME---LDHERMSYLLYQMLXGIKHLH-- 143
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNA 240
I+HRD+K +NI++ K+ DFGLA+ G S + T T Y PE +
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGM 200
Query: 241 KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDF 292
DI+S G + +++ K++ F RD + + + + P +F
Sbjct: 201 GYKENVDIWSVGCIMGEMVR-HKIL---FPGRDYIDQWNKVIEQLGTPCPEF 248
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSR---EVEGLSRVRHPNLV----C 124
++G G+ G+V +V VAIK I + R E++ L RH N++
Sbjct: 32 YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDI 91
Query: 125 LFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC 184
+ +E + + + +L + L K L+ + L L+Y+H
Sbjct: 92 IRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICYFLYQILRGLKYIH---SAN 146
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKML--GMEESKVFTDVRGTIGYMDPEYMTNAK- 241
++HRD+K +N+LL + K+ DFGLA++ + + T+ T Y PE M N+K
Sbjct: 147 VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 242 LTCASDIYSFGIVALQLLSGQKVI 265
T + DI+S G + ++LS + +
Sbjct: 207 YTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 102/220 (46%), Gaps = 35/220 (15%)
Query: 72 RFLGRGSAG-LVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVR-HPNLVCLFGCC 129
+ LG GS+G +V++G G+ VA+K + + D E++ L+ HPN++ + C
Sbjct: 39 KILGYGSSGTVVFQGSF-QGRPVAVKRML-IDFCDIALMEIKLLTESDDHPNVIRYY--C 94
Query: 130 VEGGEQ--YLVYEFCAAG--NLAQHLLRKDSVLTWERR---VKILRDCALALRYLHHYID 182
E ++ Y+ E C +L + D L ++ + +LR A + +LH
Sbjct: 95 SETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL-- 152
Query: 183 GCIVHRDIKLTNILLT-------------EKLEPKLSDFGLAKMLGMEESKV---FTDVR 226
I+HRD+K NIL++ E L +SDFGL K L + +
Sbjct: 153 -KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPS 211
Query: 227 GTIGYMDPEYM---TNAKLTCASDIYSFGIVALQLLSGQK 263
GT G+ PE + T +LT + DI+S G V +LS K
Sbjct: 212 GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGK 251
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 9/151 (5%)
Query: 118 RHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYL 177
+ P L L C Y V E+ G+L H+ ++ V + A+ L +L
Sbjct: 79 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI-QQVGRFKEPHAVFYAAEIAIGLFFL 137
Query: 178 HHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAK--MLGMEESKVFTDVRGTIGYMDPE 235
I++RD+KL N++L + K++DFG+ K + +K F GT Y+ PE
Sbjct: 138 Q---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFC---GTPDYIAPE 191
Query: 236 YMTNAKLTCASDIYSFGIVALQLLSGQKVIE 266
+ + D ++FG++ ++L+GQ E
Sbjct: 192 IIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 105/256 (41%), Gaps = 32/256 (12%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSF-SREVEGLSRVRHPNLVCLFGCCVEG 132
LGRGS G V++ + + K + F + E+ + + P +V L+G EG
Sbjct: 82 LGRGSFGEVHRM---EDKQTGFQCAVKKVRLEVFRAEELMACAGLTSPRIVPLYGAVREG 138
Query: 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKL 192
+ E G+L Q L+++ L +R + L L YLH I+H D+K
Sbjct: 139 PWVNIFMELLEGGSLGQ-LVKEQGCLPEDRALYYLGQALEGLEYLHSRR---ILHGDVKA 194
Query: 193 TNILLT-EKLEPKLSDFGLAKML---GMEESKVFTD-VRGTIGYMDPEYMTNAKLTCASD 247
N+LL+ + L DFG A L G+ + + D + GT +M PE + D
Sbjct: 195 DNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVD 254
Query: 248 IYSFGIVALQLLSG-------------QKVIELDFDARD------QLTRKARDVSMGKRP 288
++S + L +L+G K+ R+ LT +A + K P
Sbjct: 255 VWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQEGLRKEP 314
Query: 289 IKDFEDPRLNGNINRA 304
I L G +NRA
Sbjct: 315 IHRVSAAELGGKVNRA 330
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 28/232 (12%)
Query: 74 LGRGSAGLV---YKGVLPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLF 126
+G G+ G+V Y VL VAIK + + + + RE+ + V H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 127 GCCV------EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + YLV E A NL Q + + L ER +L +++LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDA-NLXQVIQME---LDHERMSYLLYQMLCGIKHLH-- 143
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNA 240
I+HRD+K +NI++ K+ DFGLA+ G S + T T Y PE +
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGM 200
Query: 241 KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDF 292
DI+S G + +++ K++ F RD + + + + P +F
Sbjct: 201 GYKENVDIWSVGCIMGEMVR-HKIL---FPGRDYIDQWNKVIEQLGTPCPEF 248
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ A G
Sbjct: 73 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 126
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+L+ ++ ++
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIQV 182
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 183 TDFGFAKRV---KGRTWX-LXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ A G
Sbjct: 73 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 126
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+L+ ++ ++
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIQV 182
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ Q+ +G
Sbjct: 183 TDFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 28/232 (12%)
Query: 74 LGRGSAGLV---YKGVLPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLF 126
+G G+ G+V Y VL VAIK + + + + RE+ + V H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 127 GCCV------EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + YLV E A NL Q + + L ER +L +++LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQME---LDHERMSYLLYQMLCGIKHLH-- 143
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNA 240
I+HRD+K +NI++ K+ DFGLA+ G S + T T Y PE +
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGM 200
Query: 241 KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDF 292
DI+S G + +++ K++ F RD + + + + P +F
Sbjct: 201 GYKENVDIWSVGCIMGEMVR-HKIL---FPGRDYIDQWNKVIEQLGTPCPEF 248
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ A G
Sbjct: 73 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 126
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+L+ ++ ++
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIQV 182
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 183 TDFGFAKRV---KGRTWX-LAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 98/209 (46%), Gaps = 16/209 (7%)
Query: 74 LGRGSAGLVYKGVLPSGQV---VAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCV 130
+GRG+ G VYK G+ A+K I + + S RE+ L ++HPN++ L +
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFL 88
Query: 131 EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERR-VKILRDCALALRY-----LHHYIDGC 184
++ + F A + H+++ ++ V++ R +L Y +H+
Sbjct: 89 SHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW 148
Query: 185 IVHRDIKLTNILL----TEKLEPKLSDFGLAKMLG--MEESKVFTDVRGTIGYMDPEYMT 238
++HRD+K NIL+ E+ K++D G A++ ++ V T Y PE +
Sbjct: 149 VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLL 208
Query: 239 NAK-LTCASDIYSFGIVALQLLSGQKVIE 266
A+ T A DI++ G + +LL+ + +
Sbjct: 209 GARHYTKAIDIWAIGCIFAELLTSEPIFH 237
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ A G
Sbjct: 60 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 113
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+L+ E+ ++
Sbjct: 114 EMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDEQGYIQV 169
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 170 TDFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 9/151 (5%)
Query: 118 RHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYL 177
+ P L L C Y V E+ G+L H+ ++ V + A+ L +L
Sbjct: 400 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI-QQVGRFKEPHAVFYAAEIAIGLFFL 458
Query: 178 HHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAK--MLGMEESKVFTDVRGTIGYMDPE 235
I++RD+KL N++L + K++DFG+ K + +K F GT Y+ PE
Sbjct: 459 Q---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFC---GTPDYIAPE 512
Query: 236 YMTNAKLTCASDIYSFGIVALQLLSGQKVIE 266
+ + D ++FG++ ++L+GQ E
Sbjct: 513 IIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 77/182 (42%), Gaps = 10/182 (5%)
Query: 89 SGQVVAIKHIYKSNNTD-SFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNL 147
+ ++VA+K+I + D + RE+ +RHPN+V + +V E+ + G L
Sbjct: 43 ANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 102
Query: 148 AQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP--KL 205
+ + E R + + Y H + HRD+KL N LL P K+
Sbjct: 103 FERICNAGRFSEDEARF-FFQQLISGVSYAHAM---QVAHRDLKLENTLLDGSPAPRLKI 158
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTC-ASDIYSFGIVALQLLSGQKV 264
+DFG +K + GT Y+ PE + + +D++S G+ +L G
Sbjct: 159 ADFGYSKASVLHSQP--KSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
Query: 265 IE 266
E
Sbjct: 217 FE 218
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 77/159 (48%), Gaps = 16/159 (10%)
Query: 105 DSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLA---QHLLRKDSVLTWE 161
D F E++ ++ +++ + G E Y++YE+ ++ ++ D T
Sbjct: 88 DDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCF 147
Query: 162 RRVKILRDCAL-----ALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM 216
+++++ C + + Y+H+ + I HRD+K +NIL+ + KLSDFG ++ +
Sbjct: 148 IPIQVIK-CIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMV- 203
Query: 217 EESKVFTDVRGTIGYMDPEYMTNAKLTCAS--DIYSFGI 253
K RGT +M PE+ +N + DI+S GI
Sbjct: 204 --DKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGI 240
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 90/201 (44%), Gaps = 24/201 (11%)
Query: 74 LGRGSAGLV---YKGVLPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLF 126
+G G+ G+V Y +L VAIK + + + + RE+ + V H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 127 GCCV------EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + Y+V E A NL+Q + + L ER +L +++LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDA-NLSQVIQME---LDHERMSYLLYQMLCGIKHLH-- 143
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNA 240
I+HRD+K +NI++ K+ DFGLA+ G S + T T Y PE +
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGM 200
Query: 241 KLTCASDIYSFGIVALQLLSG 261
DI+S G + +++ G
Sbjct: 201 GYKENVDIWSVGCIMGEMIKG 221
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ A G
Sbjct: 94 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 147
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+L+ ++ ++
Sbjct: 148 EMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIQV 203
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + +T + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 204 TDFGFAKRV---KGATWT-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 75/178 (42%), Gaps = 22/178 (12%)
Query: 109 REVEGLSRVRHPNLVCLFGCCVEG------GEQYLVYEFCAA--GNLAQHLLRKDSVLTW 160
RE+ L ++H N++ L E YLV A N+ K L+
Sbjct: 76 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIV-----KSQALSD 130
Query: 161 ERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220
E ++ L+Y+H I+HRD+K +N+ + E E ++ DFGLA+ E
Sbjct: 131 EHVQFLVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE--- 184
Query: 221 VFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTR 277
T T Y PE M N DI+S G + +LL G K + D DQL R
Sbjct: 185 -MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG-KALFPGSDYIDQLKR 240
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 28/232 (12%)
Query: 74 LGRGSAGLV---YKGVLPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLF 126
+G G+ G+V Y VL VAIK + + + + RE+ + V H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 127 GCCV------EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + YLV E A NL Q + + L ER +L +++LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDA-NLXQVIQME---LDHERMSYLLYQMLXGIKHLH-- 143
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNA 240
I+HRD+K +NI++ K+ DFGLA+ G S + T T Y PE +
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGM 200
Query: 241 KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDF 292
DI+S G + +++ K++ F RD + + + + P +F
Sbjct: 201 GYKENVDIWSVGCIMGEMVR-HKIL---FPGRDYIDQWNKVIEQLGTPCPEF 248
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 25/208 (12%)
Query: 72 RFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
+ +G GS G+V++ L VAIK + + +RE++ + V+HPN+V L
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFK--NRELQIMRIVKHPNVVDLKAFFYS 103
Query: 132 GGEQ------YLVYEFCAAG--NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG 183
G++ LV E+ ++H + + + +L Y+H
Sbjct: 104 NGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI--- 160
Query: 184 CIVHRDIKLTNILLTEKLEP-----KLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMT 238
I HRDIK N+L L+P KL DFG AK+L E V + Y PE +
Sbjct: 161 GICHRDIKPQNLL----LDPPSGVLKLIDFGSAKILIAGEPNV--SXICSRYYRAPELIF 214
Query: 239 NA-KLTCASDIYSFGIVALQLLSGQKVI 265
A T DI+S G V +L+ GQ +
Sbjct: 215 GATNYTTNIDIWSTGCVMAELMQGQPLF 242
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ A G
Sbjct: 68 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 121
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+L+ ++ ++
Sbjct: 122 EMFSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIQV 177
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 178 TDFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 28/232 (12%)
Query: 74 LGRGSAGLV---YKGVLPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLF 126
+G G+ G+V Y VL VAIK + + + + RE+ + V H N++ L
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 127 GCCV------EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + YLV E A NL Q + + L ER +L +++LH
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELMDA-NLXQVIQME---LDHERMSYLLYQMLXGIKHLH-- 136
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNA 240
I+HRD+K +NI++ K+ DFGLA+ G S + T T Y PE +
Sbjct: 137 -SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGM 193
Query: 241 KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDF 292
DI+S G + +++ K++ F RD + + + + P +F
Sbjct: 194 GYKENVDIWSVGCIMGEMVR-HKIL---FPGRDYIDQWNKVIEQLGTPCPEF 241
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ A G
Sbjct: 73 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 126
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+L+ ++ ++
Sbjct: 127 EMFSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIQV 182
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 183 TDFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ A G
Sbjct: 73 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 126
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+L+ ++ ++
Sbjct: 127 EMFSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIQV 182
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 183 TDFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ A G
Sbjct: 73 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 126
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+L+ ++ ++
Sbjct: 127 EMFSHLRRIGRFAEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIQV 182
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 183 TDFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 102/224 (45%), Gaps = 39/224 (17%)
Query: 72 RFLGRGSAG-LVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVR-HPNLVCLFGCC 129
+ LG GS+G +V++G G+ VA+K + + D E++ L+ HPN++ + C
Sbjct: 21 KILGYGSSGTVVFQGSF-QGRPVAVKRML-IDFCDIALMEIKLLTESDDHPNVIRYY--C 76
Query: 130 VEGGEQ--YLVYEFCAAG--NLAQHLLRKDSVLTWERR---VKILRDCALALRYLHHYID 182
E ++ Y+ E C +L + D L ++ + +LR A + +LH
Sbjct: 77 SETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL-- 134
Query: 183 GCIVHRDIKLTNILLT-------------EKLEPKLSDFGLAKMLGMEESKV---FTDVR 226
I+HRD+K NIL++ E L +SDFGL K L + +
Sbjct: 135 -KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPS 193
Query: 227 GTIGYMDPEYM-------TNAKLTCASDIYSFGIVALQLLSGQK 263
GT G+ PE + T +LT + DI+S G V +LS K
Sbjct: 194 GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGK 237
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ A G
Sbjct: 94 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 147
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+L+ ++ ++
Sbjct: 148 EMFSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIQV 203
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 204 TDFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 81/198 (40%), Gaps = 17/198 (8%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTDS----------FSREVEGLSRVRHPNL 122
LG G+ G V+ V + V +K I K + + E+ LSRV H N+
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYID 182
+ + G LV E +G + + L I R A+ YL
Sbjct: 92 IKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRL--- 148
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPE-YMTNAK 241
I+HRDIK NI++ E KL DFG A L E K+F GTI Y PE M N
Sbjct: 149 KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL--ERGKLFYTFCGTIEYCAPEVLMGNPY 206
Query: 242 LTCASDIYSFGIVALQLL 259
+++S G+ L+
Sbjct: 207 RGPELEMWSLGVTLYTLV 224
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ A G
Sbjct: 73 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 126
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+L+ ++ ++
Sbjct: 127 EMFSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIQV 182
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 183 TDFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 10/182 (5%)
Query: 89 SGQVVAIKHIYKSNNTD-SFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNL 147
S ++VA+K+I + D + RE+ +RHPN+V + +V E+ + G L
Sbjct: 42 SNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 101
Query: 148 AQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLS- 206
+ + E R + + Y H + HRD+KL N LL P+L
Sbjct: 102 FERICNAGRFSEDEARF-FFQQLISGVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKI 157
Query: 207 -DFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTC-ASDIYSFGIVALQLLSGQKV 264
DFG +K + T GT Y+ PE + + +D++S G+ +L G
Sbjct: 158 CDFGYSKSSVLHSQPKST--VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 215
Query: 265 IE 266
E
Sbjct: 216 FE 217
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ G
Sbjct: 59 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG 112
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+L+ ++ ++
Sbjct: 113 EMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIQV 168
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + +T + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 169 TDFGFAKRV---KGRTWT-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 28/207 (13%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRV--RHPNLVCLFGCCVE 131
+G+G G V++G G+ VA+K I+ S S+ RE E V RH N++ +
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVK-IFSSREERSWFREAEIYQTVMLRHENILGFIAADNK 107
Query: 132 GG----EQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG---- 183
+ +LV ++ G+L +L R +T E +K+ A L +LH I G
Sbjct: 108 DNGTWTQLWLVSDYHEHGSLFDYLNR--YTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 165
Query: 184 -CIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVR-----GTIGYMDPEYM 237
I HRD+K NIL+ + ++D GLA + + + D+ GT YM PE +
Sbjct: 166 PAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVL 223
Query: 238 TNA------KLTCASDIYSFGIVALQL 258
++ + +DIY+ G+V ++
Sbjct: 224 DDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 28/207 (13%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRV--RHPNLVCLFGCCVE 131
+G+G G V++G G+ VA+K I+ S S+ RE E V RH N++ +
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVK-IFSSREERSWFREAEIYQTVMLRHENILGFIAADNK 71
Query: 132 GG----EQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG---- 183
+ +LV ++ G+L +L R +T E +K+ A L +LH I G
Sbjct: 72 DNGTWTQLWLVSDYHEHGSLFDYLNR--YTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 129
Query: 184 -CIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVR-----GTIGYMDPEY- 236
I HRD+K NIL+ + ++D GLA + + + D+ GT YM PE
Sbjct: 130 PAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVL 187
Query: 237 -----MTNAKLTCASDIYSFGIVALQL 258
M + + +DIY+ G+V ++
Sbjct: 188 DDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 79/187 (42%), Gaps = 10/187 (5%)
Query: 91 QVVAIKHIYKSNNTD-SFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQ 149
++VA+K+I + D + RE+ +RHPN+V + ++ E+ + G L +
Sbjct: 46 ELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYE 105
Query: 150 HLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLS--D 207
+ E R + + Y H I HRD+KL N LL P+L D
Sbjct: 106 RICNAGRFSEDEARF-FFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICD 161
Query: 208 FGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCA-SDIYSFGIVALQLLSGQKVIE 266
FG +K + T GT Y+ PE + + +D++S G+ +L G E
Sbjct: 162 FGYSKSSVLHSQPKST--VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFE 219
Query: 267 LDFDARD 273
+ RD
Sbjct: 220 DPEEPRD 226
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ G
Sbjct: 74 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG 127
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+L+ ++ ++
Sbjct: 128 EMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIQV 183
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + +T + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 184 TDFGFAKRV---KGRTWT-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 28/207 (13%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRV--RHPNLVCLFGCCVE 131
+G+G G V++G G+ VA+K I+ S S+ RE E V RH N++ +
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVK-IFSSREERSWFREAEIYQTVMLRHENILGFIAADNK 68
Query: 132 GG----EQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG---- 183
+ +LV ++ G+L +L R +T E +K+ A L +LH I G
Sbjct: 69 DNGTWTQLWLVSDYHEHGSLFDYLNR--YTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 126
Query: 184 -CIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVR-----GTIGYMDPEY- 236
I HRD+K NIL+ + ++D GLA + + + D+ GT YM PE
Sbjct: 127 PAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVL 184
Query: 237 -----MTNAKLTCASDIYSFGIVALQL 258
M + + +DIY+ G+V ++
Sbjct: 185 DDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 28/207 (13%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRV--RHPNLVCLFGCCVE 131
+G+G G V++G G+ VA+K I+ S S+ RE E V RH N++ +
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVK-IFSSREERSWFREAEIYQTVMLRHENILGFIAADNK 69
Query: 132 GG----EQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG---- 183
+ +LV ++ G+L +L R +T E +K+ A L +LH I G
Sbjct: 70 DNGTWTQLWLVSDYHEHGSLFDYLNR--YTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 127
Query: 184 -CIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVR-----GTIGYMDPEY- 236
I HRD+K NIL+ + ++D GLA + + + D+ GT YM PE
Sbjct: 128 PAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVL 185
Query: 237 -----MTNAKLTCASDIYSFGIVALQL 258
M + + +DIY+ G+V ++
Sbjct: 186 DDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 80/183 (43%), Gaps = 9/183 (4%)
Query: 91 QVVAIKHIYKSNNTDSF-----SREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
++VA+K ++ ++D RE R++ P++V + G+ Y+
Sbjct: 60 RIVALKLXSETLSSDPVFRTRXQREARTAGRLQEPHVVPIHDFGEIDGQLYVDXRLINGV 119
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+LA LR+ L R V I+R AL H HRD+K NIL++ L
Sbjct: 120 DLAA-XLRRQGPLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAYL 175
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVI 265
DFG+A E+ + GT+ Y PE + + T +DIY+ V + L+G
Sbjct: 176 VDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPY 235
Query: 266 ELD 268
+ D
Sbjct: 236 QGD 238
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 90/201 (44%), Gaps = 24/201 (11%)
Query: 74 LGRGSAGLV---YKGVLPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLF 126
+G G+ G+V Y +L VAIK + + + + RE+ + V H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 127 GCCV------EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + Y+V E A NL+Q + + L ER +L +++LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDA-NLSQVIQME---LDHERMSYLLYQMLCGIKHLH-- 143
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNA 240
I+HRD+K +NI++ K+ DFGLA+ G S + T T Y PE +
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGM 200
Query: 241 KLTCASDIYSFGIVALQLLSG 261
DI+S G + +++ G
Sbjct: 201 GYKENVDIWSVGCIMGEMIKG 221
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ A G
Sbjct: 74 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 127
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+L+ ++ ++
Sbjct: 128 EMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIQV 183
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 184 TDFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ A G
Sbjct: 73 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 126
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+L+ ++ ++
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIQV 182
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 183 TDFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 28/207 (13%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRV--RHPNLVCLFGCCVE 131
+G+G G V++G G+ VA+K I+ S S+ RE E V RH N++ +
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVK-IFSSREERSWFREAEIYQTVMLRHENILGFIAADNK 74
Query: 132 GG----EQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG---- 183
+ +LV ++ G+L +L R +T E +K+ A L +LH I G
Sbjct: 75 DNGTWTQLWLVSDYHEHGSLFDYLNR--YTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 132
Query: 184 -CIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVR-----GTIGYMDPEY- 236
I HRD+K NIL+ + ++D GLA + + + D+ GT YM PE
Sbjct: 133 PAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVL 190
Query: 237 -----MTNAKLTCASDIYSFGIVALQL 258
M + + +DIY+ G+V ++
Sbjct: 191 DDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ A G
Sbjct: 73 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 126
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+L+ ++ ++
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIQV 182
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 183 TDFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ A G
Sbjct: 73 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 126
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+L+ ++ ++
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIQV 182
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 183 TDFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ A G
Sbjct: 73 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 126
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+L+ ++ ++
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIQV 182
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 183 TDFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ A G
Sbjct: 73 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 126
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+L+ ++ ++
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIQV 182
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 183 TDFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 90/201 (44%), Gaps = 24/201 (11%)
Query: 74 LGRGSAGLV---YKGVLPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLF 126
+G G+ G+V Y +L VAIK + + + + RE+ + V H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 127 GCCV------EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + Y+V E A NL+Q + + L ER +L +++LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDA-NLSQVIQME---LDHERMSYLLYQMLCGIKHLH-- 143
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNA 240
I+HRD+K +NI++ K+ DFGLA+ G S + T T Y PE +
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGM 200
Query: 241 KLTCASDIYSFGIVALQLLSG 261
DI+S G + +++ G
Sbjct: 201 GYKENVDIWSVGCIMGEMIKG 221
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ A G
Sbjct: 73 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 126
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+L+ ++ ++
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIQV 182
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 183 TDFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 28/232 (12%)
Query: 74 LGRGSAGLV---YKGVLPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLF 126
+G G+ G+V Y VL VAIK + + + + RE+ + V H N++ L
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 127 GCCV------EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + YLV E A NL Q + + L ER +L +++LH
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQME---LDHERMSYLLYQMLCGIKHLH-- 136
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNA 240
I+HRD+K +NI++ K+ DFGLA+ G S + T T Y PE +
Sbjct: 137 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGM 193
Query: 241 KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDF 292
DI+S G + +++ K++ F RD + + + + P +F
Sbjct: 194 GYKENVDIWSVGCIMGEMVR-HKIL---FPGRDYIDQWNKVIEQLGTPCPEF 241
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 28/232 (12%)
Query: 74 LGRGSAGLV---YKGVLPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLF 126
+G G+ G+V Y VL VAIK + + + + RE+ + V H N++ L
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 127 GCCV------EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + YLV E A NL Q + + L ER +L +++LH
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQME---LDHERMSYLLYQMLCGIKHLH-- 144
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNA 240
I+HRD+K +NI++ K+ DFGLA+ G S + T T Y PE +
Sbjct: 145 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGM 201
Query: 241 KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDF 292
DI+S G + +++ K++ F RD + + + + P +F
Sbjct: 202 GYKENVDIWSVGCIMGEMVR-HKIL---FPGRDYIDQWNKVIEQLGTPCPEF 249
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 28/232 (12%)
Query: 74 LGRGSAGLV---YKGVLPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLF 126
+G G+ G+V Y VL VAIK + + + + RE+ + V H N++ L
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 127 GCCV------EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + YLV E A NL Q + + L ER +L +++LH
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQME---LDHERMSYLLYQMLCGIKHLH-- 137
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNA 240
I+HRD+K +NI++ K+ DFGLA+ G S + T T Y PE +
Sbjct: 138 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGM 194
Query: 241 KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDF 292
DI+S G + +++ K++ F RD + + + + P +F
Sbjct: 195 GYKENVDIWSVGCIMGEMVR-HKIL---FPGRDYIDQWNKVIEQLGTPCPEF 242
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 28/232 (12%)
Query: 74 LGRGSAGLV---YKGVLPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLF 126
+G G+ G+V Y VL VAIK + + + + RE+ + V H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 127 GCCV------EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + YLV E A NL Q + + L ER +L +++LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQME---LDHERMSYLLYQMLCGIKHLH-- 143
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNA 240
I+HRD+K +NI++ K+ DFGLA+ G S + T T Y PE +
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGM 200
Query: 241 KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDF 292
DI+S G + +++ K++ F RD + + + + P +F
Sbjct: 201 GYKENVDIWSVGCIMGEMVR-HKIL---FPGRDYIDQWNKVIEQLGTPCPEF 248
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 28/232 (12%)
Query: 74 LGRGSAGLV---YKGVLPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLF 126
+G G+ G+V Y VL VAIK + + + + RE+ + V H N++ L
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 127 GCCV------EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + YLV E A NL Q + + L ER +L +++LH
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQME---LDHERMSYLLYQMLCGIKHLH-- 137
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNA 240
I+HRD+K +NI++ K+ DFGLA+ G S + T T Y PE +
Sbjct: 138 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGM 194
Query: 241 KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDF 292
DI+S G + +++ K++ F RD + + + + P +F
Sbjct: 195 GYKENVDIWSVGCIMGEMVR-HKIL---FPGRDYIDQWNKVIEQLGTPCPEF 242
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 28/232 (12%)
Query: 74 LGRGSAGLV---YKGVLPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLF 126
+G G+ G+V Y VL VAIK + + + + RE+ + V H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 127 GCCV------EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + YLV E A NL Q + + L ER +L +++LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQME---LDHERMSYLLYQMLCGIKHLH-- 143
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNA 240
I+HRD+K +NI++ K+ DFGLA+ G S + T T Y PE +
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGM 200
Query: 241 KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDF 292
DI+S G + +++ K++ F RD + + + + P +F
Sbjct: 201 GYKENVDIWSVGCIMGEMVR-HKIL---FPGRDYIDQWNKVIEQLGTPCPEF 248
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ G
Sbjct: 73 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGG 126
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
++ HL R R + L YLH +D +++RD+K N+L+ ++ K+
Sbjct: 127 DMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIKV 182
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 183 ADFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 28/207 (13%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRV--RHPNLVCLFGCCVE 131
+G+G G V++G G+ VA+K I+ S S+ RE E V RH N++ +
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVK-IFSSREERSWFREAEIYQTVMLRHENILGFIAADNK 94
Query: 132 GG----EQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG---- 183
+ +LV ++ G+L +L R +T E +K+ A L +LH I G
Sbjct: 95 DNGTWTQLWLVSDYHEHGSLFDYLNR--YTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 152
Query: 184 -CIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVR-----GTIGYMDPEY- 236
I HRD+K NIL+ + ++D GLA + + + D+ GT YM PE
Sbjct: 153 PAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVL 210
Query: 237 -----MTNAKLTCASDIYSFGIVALQL 258
M + + +DIY+ G+V ++
Sbjct: 211 DDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 28/232 (12%)
Query: 74 LGRGSAGLV---YKGVLPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLF 126
+G G+ G+V Y VL VAIK + + + + RE+ + V H N++ L
Sbjct: 31 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 88
Query: 127 GCCV------EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + YLV E A NL Q + + L ER +L +++LH
Sbjct: 89 NVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQME---LDHERMSYLLYQMLCGIKHLH-- 142
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNA 240
I+HRD+K +NI++ K+ DFGLA+ G S + T T Y PE +
Sbjct: 143 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGM 199
Query: 241 KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDF 292
DI+S G + +++ K++ F RD + + + + P +F
Sbjct: 200 GYKENVDIWSVGCIMGEMVR-HKIL---FPGRDYIDQWNKVIEQLGTPCPEF 247
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 28/232 (12%)
Query: 74 LGRGSAGLV---YKGVLPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLF 126
+G G+ G+V Y VL VAIK + + + + RE+ + V H N++ L
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 127 GCCV------EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + YLV E A NL Q + + L ER +L +++LH
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQME---LDHERMSYLLYQMLCGIKHLH-- 144
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNA 240
I+HRD+K +NI++ K+ DFGLA+ G S + T T Y PE +
Sbjct: 145 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGM 201
Query: 241 KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDF 292
DI+S G + +++ K++ F RD + + + + P +F
Sbjct: 202 GYKENVDIWSVGCIMGEMVR-HKIL---FPGRDYIDQWNKVIEQLGTPCPEF 249
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ G
Sbjct: 73 ILDKQKVVKLKEIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGG 126
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+++ ++ K+
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLMIDQQGYIKV 182
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFGLAK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 183 TDFGLAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ G
Sbjct: 73 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGG 126
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
++ HL R R + L YLH +D +++RD+K N+L+ ++ K+
Sbjct: 127 DMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIKV 182
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 183 ADFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 102/237 (43%), Gaps = 29/237 (12%)
Query: 77 GSAGLVYKGV---LPSGQVVAIKHI--YKSNNTDSFSREVEGLSRVRHPNLVCLFGCCV- 130
G G Y + L G A+K I ++ + + RE + HPN++ L C+
Sbjct: 38 GEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLR 97
Query: 131 EGG---EQYLVYEFCAAGNLAQHLLR---KDSVLTWERRVKILRDCALALRYLHHYIDGC 184
E G E +L+ F G L + R K + LT ++ + +L L +H
Sbjct: 98 ERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKG 154
Query: 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKML-----GMEESKVFTD---VRGTIGYMDPEY 236
HRD+K TNILL ++ +P L D G G ++ D R TI Y PE
Sbjct: 155 YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPE- 213
Query: 237 MTNAKLTCA----SDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARD-VSMGKRP 288
+ + + C +D++S G V ++ G+ ++ F D + ++ +S+ + P
Sbjct: 214 LFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSP 270
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 28/232 (12%)
Query: 74 LGRGSAGLV---YKGVLPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLF 126
+G G+ G+V Y VL + VAIK + + + + RE+ + V H N++ L
Sbjct: 70 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 127 GCCV------EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + YLV E A NL Q + + L ER +L +++LH
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQME---LDHERMSYLLYQMLCGIKHLH-- 181
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNA 240
I+HRD+K +NI++ K+ DFGLA+ G S + T T Y PE +
Sbjct: 182 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGM 238
Query: 241 KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDF 292
DI+S G + +++ K++ F RD + + + + P +F
Sbjct: 239 GYKENVDIWSVGCIMGEMVR-HKIL---FPGRDYIDQWNKVIEQLGTPCPEF 286
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
Query: 153 RKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP----KLSDF 208
R D T +I++ A++YLH I HRD+K N+L T K P KL+DF
Sbjct: 107 RGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSK-RPNAILKLTDF 162
Query: 209 GLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
G AK S T+ T Y+ PE + K + D++S G++ LL G
Sbjct: 163 GFAKETTSHNS--LTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT-DVRGTIGYMDPEYMTNAKLTC 244
+HRD+ NILL+EK K+ DFGLA+ + + V D R + +M PE + + T
Sbjct: 213 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 272
Query: 245 ASDIYSFGIVALQLLS 260
SD++SFG++ ++ S
Sbjct: 273 QSDVWSFGVLLWEIFS 288
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 13/93 (13%)
Query: 74 LGRGSAGLVYKG------VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRV-----RHPNL 122
LGRG+ G V + + + VA+K + K T S R + ++ H N+
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVK-MLKEGATHSEHRALMSELKILIHIGHHLNV 86
Query: 123 VCLFGCCVE-GGEQYLVYEFCAAGNLAQHLLRK 154
V L G C + GG ++ EFC GNL+ +L K
Sbjct: 87 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 119
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 22/180 (12%)
Query: 101 SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQ--YLVYEFCAAGNLAQHLLRKDSVL 158
N + +E++ L R+RH N++ L +Q Y+V E+C G Q +L DSV
Sbjct: 47 PNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG--MQEML--DSVP 102
Query: 159 TWERRVKILRD----CAL--ALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAK 212
E+R + + C L L YLH IVH+DIK N+LLT K+S G+A+
Sbjct: 103 --EKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAE 157
Query: 213 ML-GMEESKVFTDVRGTIGYMDPEYMTNAKLTCAS---DIYSFGIVALQLLSGQKVIELD 268
L +G+ + PE + N T + DI+S G+ + +G E D
Sbjct: 158 ALHPFAADDTCRTSQGSPAFQPPE-IANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD 216
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 28/232 (12%)
Query: 74 LGRGSAGLV---YKGVLPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLF 126
+G G+ G+V Y VL + VAIK + + + + RE+ + V H N++ L
Sbjct: 70 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 127 GCCV------EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + YLV E A NL Q + + L ER +L +++LH
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQME---LDHERMSYLLYQMLCGIKHLH-- 181
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNA 240
I+HRD+K +NI++ K+ DFGLA+ G S + T T Y PE +
Sbjct: 182 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGM 238
Query: 241 KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDF 292
DI+S G + +++ K++ F RD + + + + P +F
Sbjct: 239 GYKENVDIWSVGCIMGEMVR-HKIL---FPGRDYIDQWNKVIEQLGTPCPEF 286
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT-DVRGTIGYMDPEYMTNAKLTC 244
+HRD+ NILL+EK K+ DFGLA+ + + V D R + +M PE + + T
Sbjct: 215 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 274
Query: 245 ASDIYSFGIVALQLLS 260
SD++SFG++ ++ S
Sbjct: 275 QSDVWSFGVLLWEIFS 290
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 13/93 (13%)
Query: 74 LGRGSAGLVYKG------VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRV-----RHPNL 122
LGRG+ G V + + + VA+K + K T S R + ++ H N+
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVK-MLKEGATHSEHRALMSELKILIHIGHHLNV 88
Query: 123 VCLFGCCVE-GGEQYLVYEFCAAGNLAQHLLRK 154
V L G C + GG ++ EFC GNL+ +L K
Sbjct: 89 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 121
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT-DVRGTIGYMDPEYMTNAKLTC 244
+HRD+ NILL+EK K+ DFGLA+ + + V D R + +M PE + + T
Sbjct: 220 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 279
Query: 245 ASDIYSFGIVALQLLS 260
SD++SFG++ ++ S
Sbjct: 280 QSDVWSFGVLLWEIFS 295
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 13/93 (13%)
Query: 74 LGRGSAGLVYKG------VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRV-----RHPNL 122
LGRG+ G V + + + VA+K + K T S R + ++ H N+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVK-MLKEGATHSEHRALMSELKILIHIGHHLNV 93
Query: 123 VCLFGCCVE-GGEQYLVYEFCAAGNLAQHLLRK 154
V L G C + GG ++ EFC GNL+ +L K
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 126
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT-DVRGTIGYMDPEYMTNAKLTC 244
+HRD+ NILL+EK K+ DFGLA+ + + V D R + +M PE + + T
Sbjct: 222 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 281
Query: 245 ASDIYSFGIVALQLLS 260
SD++SFG++ ++ S
Sbjct: 282 QSDVWSFGVLLWEIFS 297
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 13/93 (13%)
Query: 74 LGRGSAGLVYKG------VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRV-----RHPNL 122
LGRG+ G V + + + VA+K + K T S R + ++ H N+
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVK-MLKEGATHSEHRALMSELKILIHIGHHLNV 95
Query: 123 VCLFGCCVE-GGEQYLVYEFCAAGNLAQHLLRK 154
V L G C + GG ++ EFC GNL+ +L K
Sbjct: 96 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 128
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 10/182 (5%)
Query: 89 SGQVVAIKHIYKSNNTD-SFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNL 147
S ++VA+K+I + D + RE+ +RHPN+V + +V E+ + G L
Sbjct: 43 SNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 102
Query: 148 AQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLS- 206
+ + E R + + Y H + HRD+KL N LL P+L
Sbjct: 103 FERICNAGRFSEDEARF-FFQQLISGVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKI 158
Query: 207 -DFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTC-ASDIYSFGIVALQLLSGQKV 264
FG +K + D GT Y+ PE + + +D++S G+ +L G
Sbjct: 159 CAFGYSKSSVLHSQP--KDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
Query: 265 IE 266
E
Sbjct: 217 FE 218
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ G
Sbjct: 73 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGG 126
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+++ ++ K+
Sbjct: 127 EMFSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLMIDQQGYIKV 182
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 183 TDFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 77/169 (45%), Gaps = 27/169 (15%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQ-HLLRKDSV-- 157
RE+ L ++H N++ L E + YLV A N+ + L D V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 158 LTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217
L ++ ILR L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 130 LIYQ----ILR----GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 178
Query: 218 ESKVFTDVRGTIGYMDPEYMTNA-KLTCASDIYSFGIVALQLLSGQKVI 265
T T Y PE M NA DI+S G + +LL+G+ +
Sbjct: 179 ----MTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 21/166 (12%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQHLLRKDSVLTW 160
RE+ L ++H N++ L E + YLV A N+ K LT
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KXQKLTD 124
Query: 161 ERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220
+ ++ L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 125 DHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE--- 178
Query: 221 VFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVI 265
T T Y PE M N DI+S G + +LL+G+ +
Sbjct: 179 -MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ A G
Sbjct: 73 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 126
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+++ ++ ++
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLIIDQQGYIQV 182
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 183 TDFGFAKRV---KGRTWX-LCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ G
Sbjct: 73 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG 126
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+L+ ++ K+
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIKV 182
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 183 ADFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 24/201 (11%)
Query: 74 LGRGSAGLV---YKGVLPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLF 126
+G G+ G+V Y +L VAIK + + + + RE+ + V H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 127 GCCV------EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + Y+V E A NL Q + + L ER +L +++LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQME---LDHERMSYLLYQMLCGIKHLH-- 143
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNA 240
I+HRD+K +NI++ K+ DFGLA+ G S + T T Y PE +
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGM 200
Query: 241 KLTCASDIYSFGIVALQLLSG 261
DI+S G + +++ G
Sbjct: 201 GYKENVDIWSVGCIMGEMIKG 221
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 75/178 (42%), Gaps = 22/178 (12%)
Query: 109 REVEGLSRVRHPNLVCLFGCCVEG------GEQYLVYEFCAA--GNLAQHLLRKDSVLTW 160
RE+ L ++H N++ L E YLV A N+ K L+
Sbjct: 68 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIV-----KCQALSD 122
Query: 161 ERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220
E ++ L+Y+H I+HRD+K +N+ + E E ++ DFGLA+ E
Sbjct: 123 EHVQFLVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEE--- 176
Query: 221 VFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTR 277
T T Y PE M N DI+S G + +LL G K + D DQL R
Sbjct: 177 -MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG-KALFPGSDYIDQLKR 232
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 61/137 (44%), Gaps = 16/137 (11%)
Query: 136 YLVYEFCAAGNLAQHLLRKDSVLTWERRV--KILRDCALALRYLHHYIDGCIVHRDIKLT 193
Y+ + C NL + R+ S+ E V I A A+ +LH ++HRD+K +
Sbjct: 137 YIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLH---SKGLMHRDLKPS 193
Query: 194 NILLTEKLEPKLSDFGLAKMLGM--EESKVFTDVR---------GTIGYMDPEYMTNAKL 242
NI T K+ DFGL + EE V T + GT YM PE +
Sbjct: 194 NIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNY 253
Query: 243 TCASDIYSFGIVALQLL 259
+ DI+S G++ +LL
Sbjct: 254 SHKVDIFSLGLILFELL 270
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 75/178 (42%), Gaps = 22/178 (12%)
Query: 109 REVEGLSRVRHPNLVCLFGCCVEG------GEQYLVYEFCAA--GNLAQHLLRKDSVLTW 160
RE+ L ++H N++ L E YLV A N+ K L+
Sbjct: 76 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIV-----KCQALSD 130
Query: 161 ERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220
E ++ L+Y+H I+HRD+K +N+ + E E ++ DFGLA+ E
Sbjct: 131 EHVQFLVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE--- 184
Query: 221 VFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTR 277
T T Y PE M N DI+S G + +LL G K + D DQL R
Sbjct: 185 -MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG-KALFPGSDYIDQLKR 240
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 87/215 (40%), Gaps = 27/215 (12%)
Query: 67 NDWDRRF--------LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTD--SFSREVEGLSR 116
+WD F +G+G G VY G + + I + N +F REV +
Sbjct: 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQ 85
Query: 117 VRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRY 176
RH N+V G C+ ++ C L + VL + +I ++ + Y
Sbjct: 86 TRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGY 145
Query: 177 LHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD----VRGTIGYM 232
LH I+H+D+K N+ + + ++DFGL + G+ ++ D G + ++
Sbjct: 146 LH---AKGILHKDLKSKNVFY-DNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHL 201
Query: 233 DPEYMTNAK---------LTCASDIYSFGIVALQL 258
PE + + SD+++ G + +L
Sbjct: 202 APEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 90/195 (46%), Gaps = 15/195 (7%)
Query: 74 LGRGSAGLVYK-GVLPSGQVVAIKHIYKSNNTDSFS-REVEGLSRVRHPNLVCLFGCCVE 131
LGRGS G V++ +G A+K + + F E+ + + P +V L+G E
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKV----RLEVFRVEELVACAGLSSPRIVPLYGAVRE 135
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIK 191
G + E G+L Q L+++ L +R + L L YLH I+H D+K
Sbjct: 136 GPWVNIFMELLEGGSLGQ-LIKQMGCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVK 191
Query: 192 LTNILLT-EKLEPKLSDFGLAKML---GMEESKVFTD-VRGTIGYMDPEYMTNAKLTCAS 246
N+LL+ + L DFG A L G+ +S + D + GT +M PE +
Sbjct: 192 ADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKV 251
Query: 247 DIYSFGIVALQLLSG 261
DI+S + L +L+G
Sbjct: 252 DIWSSCCMMLHMLNG 266
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 24/201 (11%)
Query: 74 LGRGSAGLV---YKGVLPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLF 126
+G G+ G+V Y +L VAIK + + + + RE+ + V H N++ L
Sbjct: 33 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 90
Query: 127 GCCV------EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + Y+V E A NL Q + + L ER +L +++LH
Sbjct: 91 NVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQME---LDHERMSYLLYQMLCGIKHLH-- 144
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNA 240
I+HRD+K +NI++ K+ DFGLA+ G S + T T Y PE +
Sbjct: 145 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGM 201
Query: 241 KLTCASDIYSFGIVALQLLSG 261
DI+S G + +++ G
Sbjct: 202 GYKENVDIWSVGCIMGEMIKG 222
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 24/201 (11%)
Query: 74 LGRGSAGLV---YKGVLPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLF 126
+G G+ G+V Y +L VAIK + + + + RE+ + V H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 127 GCCV------EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + Y+V E A NL Q + + L ER +L +++LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQME---LDHERMSYLLYQMLCGIKHLH-- 143
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNA 240
I+HRD+K +NI++ K+ DFGLA+ G S + T T Y PE +
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGM 200
Query: 241 KLTCASDIYSFGIVALQLLSG 261
DI+S G + +++ G
Sbjct: 201 GYKENVDIWSVGCIMGEMIKG 221
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ G
Sbjct: 73 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGG 126
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+++ ++ K+
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLMIDQQGYIKV 182
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 183 TDFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ G
Sbjct: 74 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGG 127
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+++ ++ K+
Sbjct: 128 EMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLMIDQQGYIKV 183
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 184 TDFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ G
Sbjct: 66 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG 119
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+L+ ++ ++
Sbjct: 120 EMFSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIQV 175
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 176 TDFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Query: 153 RKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP----KLSDF 208
R D T +I++ A++YLH I HRD+K N+L T K P KL+DF
Sbjct: 123 RGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSK-RPNAILKLTDF 178
Query: 209 GLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
G AK S T T Y+ PE + K + D++S G++ LL G
Sbjct: 179 GFAKETTSHNS--LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 229
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 62/137 (45%), Gaps = 21/137 (15%)
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHR 188
C++GGE + ++ R D T +I++ A++YLH I HR
Sbjct: 140 CLDGGELF-----------SRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHR 185
Query: 189 DIKLTNILLTEKLEP----KLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTC 244
D+K N+L T K P KL+DFG AK S T T Y+ PE + K
Sbjct: 186 DVKPENLLYTSK-RPNAILKLTDFGFAKETTSHNS--LTTPCYTPYYVAPEVLGPEKYDK 242
Query: 245 ASDIYSFGIVALQLLSG 261
+ D++S G++ LL G
Sbjct: 243 SCDMWSLGVIMYILLCG 259
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 21/166 (12%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQHLLRKDSVLTW 160
RE+ L ++H N++ L E + YLV A N+ K LT
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KXQKLTD 124
Query: 161 ERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220
+ ++ L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 125 DHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 178
Query: 221 VFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVI 265
T T Y PE M N DI+S G + +LL+G+ +
Sbjct: 179 -MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Query: 153 RKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP----KLSDF 208
R D T +I++ A++YLH I HRD+K N+L T K P KL+DF
Sbjct: 115 RGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSK-RPNAILKLTDF 170
Query: 209 GLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
G AK S T T Y+ PE + K + D++S G++ LL G
Sbjct: 171 GFAKETTSHNS--LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 221
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Query: 153 RKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP----KLSDF 208
R D T +I++ A++YLH I HRD+K N+L T K P KL+DF
Sbjct: 159 RGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSK-RPNAILKLTDF 214
Query: 209 GLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
G AK S T T Y+ PE + K + D++S G++ LL G
Sbjct: 215 GFAKETTSHNS--LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 265
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ G
Sbjct: 74 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG 127
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+L+ ++ ++
Sbjct: 128 EMFSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIQV 183
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 184 TDFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Query: 153 RKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP----KLSDF 208
R D T +I++ A++YLH I HRD+K N+L T K P KL+DF
Sbjct: 114 RGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSK-RPNAILKLTDF 169
Query: 209 GLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
G AK S T T Y+ PE + K + D++S G++ LL G
Sbjct: 170 GFAKETTSHNS--LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 220
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Query: 153 RKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP----KLSDF 208
R D T +I++ A++YLH I HRD+K N+L T K P KL+DF
Sbjct: 113 RGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSK-RPNAILKLTDF 168
Query: 209 GLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
G AK S T T Y+ PE + K + D++S G++ LL G
Sbjct: 169 GFAKETTSHNS--LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 219
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ G
Sbjct: 73 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG 126
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+L+ ++ ++
Sbjct: 127 EMFSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIQV 182
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 183 TDFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 62/137 (45%), Gaps = 21/137 (15%)
Query: 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHR 188
C++GGE + ++ R D T +I++ A++YLH I HR
Sbjct: 96 CLDGGELF-----------SRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHR 141
Query: 189 DIKLTNILLTEKLEP----KLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTC 244
D+K N+L T K P KL+DFG AK S T T Y+ PE + K
Sbjct: 142 DVKPENLLYTSK-RPNAILKLTDFGFAKETTSHNS--LTTPCYTPYYVAPEVLGPEKYDK 198
Query: 245 ASDIYSFGIVALQLLSG 261
+ D++S G++ LL G
Sbjct: 199 SCDMWSLGVIMYILLCG 215
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ G
Sbjct: 73 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG 126
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+L+ ++ ++
Sbjct: 127 EMFSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIQV 182
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 183 TDFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ G
Sbjct: 73 ILDKQKVVKLKEIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGG 126
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+++ ++ ++
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLMIDQQGYIQV 182
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFGLAK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 183 TDFGLAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 90/211 (42%), Gaps = 23/211 (10%)
Query: 72 RFLGRGSAGLV----YKGVLPSGQVVAIK-----HIYKSNNTDSFSREVEGLSRVRHPNL 122
+ +GRG+ G V +K S +V A+K + K +++ F E + ++ P +
Sbjct: 81 KVIGRGAFGEVQLVRHKA---SQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWV 137
Query: 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYID 182
V LF + Y+V E+ G+L + D W + + LAL +H
Sbjct: 138 VQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTA--EVVLALDAIHSM-- 193
Query: 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVR-GTIGYMDPEYMT--- 238
++HRD+K N+LL + KL+DFG + E V D GT Y+ PE +
Sbjct: 194 -GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMD-ETGMVHCDTAVGTPDYISPEVLKSQG 251
Query: 239 -NAKLTCASDIYSFGIVALQLLSGQKVIELD 268
+ D +S G+ ++L G D
Sbjct: 252 GDGYYGRECDWWSVGVFLFEMLVGDTPFYAD 282
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Query: 153 RKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP----KLSDF 208
R D T +I++ A++YLH I HRD+K N+L T K P KL+DF
Sbjct: 107 RGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSK-RPNAILKLTDF 162
Query: 209 GLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
G AK S T T Y+ PE + K + D++S G++ LL G
Sbjct: 163 GFAKETTSHNS--LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Query: 153 RKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP----KLSDF 208
R D T +I++ A++YLH I HRD+K N+L T K P KL+DF
Sbjct: 108 RGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSK-RPNAILKLTDF 163
Query: 209 GLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
G AK S T T Y+ PE + K + D++S G++ LL G
Sbjct: 164 GFAKETTSHNS--LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 214
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Query: 153 RKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP----KLSDF 208
R D T +I++ A++YLH I HRD+K N+L T K P KL+DF
Sbjct: 109 RGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSK-RPNAILKLTDF 164
Query: 209 GLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
G AK S T T Y+ PE + K + D++S G++ LL G
Sbjct: 165 GFAKETTSHNS--LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 215
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 24/201 (11%)
Query: 74 LGRGSAGLV---YKGVLPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLF 126
+G G+ G+V Y +L VAIK + + + + RE+ + V H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 127 GCCV------EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + Y+V E A NL Q + + L ER +L +++LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQME---LDHERMSYLLYQMLCGIKHLH-- 143
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNA 240
I+HRD+K +NI++ K+ DFGLA+ G S + T T Y PE +
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPEVVTRYYRAPEVILGM 200
Query: 241 KLTCASDIYSFGIVALQLLSG 261
DI+S G + +++ G
Sbjct: 201 GYKENVDIWSVGCIMGEMIKG 221
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ G
Sbjct: 66 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG 119
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+L+ ++ ++
Sbjct: 120 EMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIQV 175
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 176 TDFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 69/147 (46%), Gaps = 9/147 (6%)
Query: 120 PNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHH 179
P +V L+G EG + E G+L Q L+++ L +R + L L YLH
Sbjct: 110 PRIVPLYGAVREGPWVNIFMELLEGGSLGQ-LIKQMGCLPEDRALYYLGQALEGLEYLHT 168
Query: 180 YIDGCIVHRDIKLTNILLT-EKLEPKLSDFGLAKML---GMEESKVFTD-VRGTIGYMDP 234
I+H D+K N+LL+ + L DFG A L G+ +S + D + GT +M P
Sbjct: 169 RR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAP 225
Query: 235 EYMTNAKLTCASDIYSFGIVALQLLSG 261
E + DI+S + L +L+G
Sbjct: 226 EVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ G
Sbjct: 74 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG 127
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+L+ ++ ++
Sbjct: 128 EMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIQV 183
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 184 TDFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 69/147 (46%), Gaps = 9/147 (6%)
Query: 120 PNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHH 179
P +V L+G EG + E G+L Q L+++ L +R + L L YLH
Sbjct: 126 PRIVPLYGAVREGPWVNIFMELLEGGSLGQ-LIKQMGCLPEDRALYYLGQALEGLEYLHT 184
Query: 180 YIDGCIVHRDIKLTNILLT-EKLEPKLSDFGLAKML---GMEESKVFTD-VRGTIGYMDP 234
I+H D+K N+LL+ + L DFG A L G+ +S + D + GT +M P
Sbjct: 185 RR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAP 241
Query: 235 EYMTNAKLTCASDIYSFGIVALQLLSG 261
E + DI+S + L +L+G
Sbjct: 242 EVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ G
Sbjct: 74 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG 127
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+L+ ++ ++
Sbjct: 128 EMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIQV 183
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 184 TDFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ G
Sbjct: 73 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG 126
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+L+ ++ ++
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIQV 182
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 183 TDFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ G
Sbjct: 73 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGG 126
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+L+ ++ ++
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIQV 182
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 183 TDFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ G
Sbjct: 73 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGG 126
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+L+ ++ ++
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIQV 182
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 183 TDFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ G
Sbjct: 74 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG 127
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+L+ ++ ++
Sbjct: 128 EMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIQV 183
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 184 TDFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 85/207 (41%), Gaps = 15/207 (7%)
Query: 72 RFLGRGSAGLVYKGVLPSG-QVVAIK-----HIYKSNNTDSFSREVEGLSRVRHPNLVCL 125
+ +GRG+ G V S +V A+K + K +++ F E + ++ P +V L
Sbjct: 80 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 139
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
F + Y+V E+ G+L + D W R + LAL +H
Sbjct: 140 FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA--EVVLALDAIHSM---GF 194
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMT----NAK 241
+HRD+K N+LL + KL+DFG + E GT Y+ PE + +
Sbjct: 195 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGY 254
Query: 242 LTCASDIYSFGIVALQLLSGQKVIELD 268
D +S G+ ++L G D
Sbjct: 255 YGRECDWWSVGVFLYEMLVGDTPFYAD 281
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ G
Sbjct: 73 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG 126
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+L+ ++ ++
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIQV 182
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 183 TDFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ G
Sbjct: 73 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGG 126
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+L+ ++ ++
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIQV 182
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 183 TDFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 85/207 (41%), Gaps = 15/207 (7%)
Query: 72 RFLGRGSAGLVYKGVLPSG-QVVAIK-----HIYKSNNTDSFSREVEGLSRVRHPNLVCL 125
+ +GRG+ G V S +V A+K + K +++ F E + ++ P +V L
Sbjct: 75 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 134
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
F + Y+V E+ G+L + D W R + LAL +H
Sbjct: 135 FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA--EVVLALDAIHSM---GF 189
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMT----NAK 241
+HRD+K N+LL + KL+DFG + E GT Y+ PE + +
Sbjct: 190 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGY 249
Query: 242 LTCASDIYSFGIVALQLLSGQKVIELD 268
D +S G+ ++L G D
Sbjct: 250 YGRECDWWSVGVFLYEMLVGDTPFYAD 276
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 33/219 (15%)
Query: 70 DRRFLGRGSAGLVYKGVLPS-GQVVAIKHIYKSN--NTDSFSREVEGLSRVRHPNLVCLF 126
D + LG G GLV+ V + VAIK I ++ + RE++ + R+ H N+V +F
Sbjct: 15 DLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVF 74
Query: 127 GCCVEGGEQ--------------YLVYEFCAAGNLAQHLLRKDSVLTWERRV---KILRD 169
G Q Y+V E+ +LA +L + +L R+ ++LR
Sbjct: 75 EILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLAN-VLEQGPLLEEHARLFMYQLLR- 131
Query: 170 CALALRYLHHYIDGCIVHRDIKLTNILL-TEKLEPKLSDFGLAKMLGMEESKVFTDVRGT 228
L+Y+H ++HRD+K N+ + TE L K+ DFGLA+++ S G
Sbjct: 132 ---GLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGL 185
Query: 229 IG--YMDPEYMTNA-KLTCASDIYSFGIVALQLLSGQKV 264
+ Y P + + T A D+++ G + ++L+G+ +
Sbjct: 186 VTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTL 224
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ G
Sbjct: 74 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG 127
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+L+ ++ ++
Sbjct: 128 EMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIQV 183
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 184 TDFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 85/207 (41%), Gaps = 15/207 (7%)
Query: 72 RFLGRGSAGLVYKGVLPSG-QVVAIK-----HIYKSNNTDSFSREVEGLSRVRHPNLVCL 125
+ +GRG+ G V S +V A+K + K +++ F E + ++ P +V L
Sbjct: 80 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 139
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185
F + Y+V E+ G+L + D W R + LAL +H
Sbjct: 140 FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA--EVVLALDAIHSM---GF 194
Query: 186 VHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMT----NAK 241
+HRD+K N+LL + KL+DFG + E GT Y+ PE + +
Sbjct: 195 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGY 254
Query: 242 LTCASDIYSFGIVALQLLSGQKVIELD 268
D +S G+ ++L G D
Sbjct: 255 YGRECDWWSVGVFLYEMLVGDTPFYAD 281
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ G
Sbjct: 73 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG 126
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+L+ ++ ++
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIQV 182
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 183 TDFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 15/158 (9%)
Query: 71 RRFLGRGSAGLVYKGVLPSGQV-VAIKHIYKSN----NTDSFSREVEGLSRVRHPNLVCL 125
+ +GRGS G VY + + VAIK + + + RE+ L+R++ ++ L
Sbjct: 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRL 90
Query: 126 FGCCVEGG-----EQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
+ + E Y+V E + + L + LT E IL + L ++H
Sbjct: 91 YDLIIPDDLLKFDELYIVLEIADSD--LKKLFKTPIFLTEEHIKTILYNLLLGENFIH-- 146
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE 218
+ I+HRD+K N LL + K+ DFGLA+ + E+
Sbjct: 147 -ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEK 183
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ G
Sbjct: 94 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG 147
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+L+ ++ ++
Sbjct: 148 EMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIQV 203
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 204 TDFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQ-HLLRKDSV-- 157
RE+ L ++H N++ L E + YLV A N+ + L D V
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 134
Query: 158 LTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217
L ++ ILR L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 135 LIYQ----ILR----GLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE 183
Query: 218 ESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVI 265
T T Y PE M N DI+S G + +LL+G+ +
Sbjct: 184 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 26/202 (12%)
Query: 72 RFLGRGSAGLVY------------KGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRH 119
R LG GS G V +L +VV +K I + N + V
Sbjct: 48 RTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAV------NF 101
Query: 120 PNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHH 179
P LV L + Y+V E+ G + HL R R + L YLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS 160
Query: 180 YIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN 239
+D +++RD+K N+L+ ++ K++DFG AK + + + + + GT Y+ PE + +
Sbjct: 161 -LD--LIYRDLKPENLLIDQQGYIKVADFGFAKRV---KGRTWX-LCGTPEYLAPEIILS 213
Query: 240 AKLTCASDIYSFGIVALQLLSG 261
A D ++ G++ ++ +G
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAG 235
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQ-HLLRKDSV-- 157
RE+ L ++H N++ L E + YLV A N+ + L D V
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 136
Query: 158 LTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217
L ++ ILR L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 137 LIYQ----ILR----GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE 185
Query: 218 ESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVI 265
T T Y PE M N DI+S G + +LL+G+ +
Sbjct: 186 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQ-HLLRKDSV-- 157
RE+ L ++H N++ L E + YLV A N+ + L D V
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 134
Query: 158 LTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217
L ++ ILR L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 135 LIYQ----ILR----GLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE 183
Query: 218 ESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVI 265
T T Y PE M N DI+S G + +LL+G+ +
Sbjct: 184 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 10/182 (5%)
Query: 89 SGQVVAIKHIYKSNN-TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNL 147
S ++VA+K+I + + RE+ +RHPN+V + +V E+ + G L
Sbjct: 43 SNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 102
Query: 148 AQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLS- 206
+ + E R + + Y H + HRD+KL N LL P+L
Sbjct: 103 FERICNAGRFSEDEARF-FFQQLISGVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKI 158
Query: 207 -DFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTC-ASDIYSFGIVALQLLSGQKV 264
DFG +K + T GT Y+ PE + + +D++S G+ +L G
Sbjct: 159 CDFGYSKSSVLHSQPKST--VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
Query: 265 IE 266
E
Sbjct: 217 FE 218
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 93/216 (43%), Gaps = 27/216 (12%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G V +G VA+K + + + + RE+ L ++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 129 CV------EGGEQYLVYEFCAA--GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + YLV A N+ K + LT + ++ L+Y+H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIV-----KCAKLTDDHVQFLIYQILRGLKYIH-- 138
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN- 239
I+HRD+K +N+ + E E K+ DFGLA+ E T T Y PE M N
Sbjct: 139 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 193
Query: 240 AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQL 275
DI+S G + +LL+G+ + D DQL
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRTLFP-GTDHIDQL 228
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 80/176 (45%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P L L + Y+V E+ G
Sbjct: 74 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGG 127
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+++ ++ K+
Sbjct: 128 EMFSHLRRIGRFXEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLMIDQQGYIKV 183
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 184 TDFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQ-HLLRKDSV-- 157
RE+ L ++H N++ L E + YLV A N+ + L D V
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 136
Query: 158 LTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217
L ++ ILR L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 137 LIYQ----ILR----GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE 185
Query: 218 ESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVI 265
T T Y PE M N DI+S G + +LL+G+ +
Sbjct: 186 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQ-HLLRKDSV-- 157
RE+ L ++H N++ L E + YLV A N+ + L D V
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 136
Query: 158 LTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217
L ++ ILR L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 137 LIYQ----ILR----GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE 185
Query: 218 ESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVI 265
T T Y PE M N DI+S G + +LL+G+ +
Sbjct: 186 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQ-HLLRKDSV-- 157
RE+ L ++H N++ L E + YLV A N+ + L D V
Sbjct: 81 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 140
Query: 158 LTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217
L ++ ILR L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 141 LIYQ----ILR----GLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE 189
Query: 218 ESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVI 265
T T Y PE M N DI+S G + +LL+G+ +
Sbjct: 190 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 234
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 92/216 (42%), Gaps = 27/216 (12%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G V +G VA+K + + + + RE+ L ++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 129 CV------EGGEQYLVYEFCAA--GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + YLV A N+ K LT + ++ L+Y+H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLIYQILRGLKYIH-- 138
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN- 239
I+HRD+K +N+ + E E K+ DFGLA+ E T T Y PE M N
Sbjct: 139 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 193
Query: 240 AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQL 275
DI+S G + +LL+G+ + D DQL
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRTLFP-GTDHIDQL 228
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 32/209 (15%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G V +G VA+K + + + + RE+ L ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 129 CV------EGGEQYLVYEFCAA--GNLAQ-HLLRKDSV--LTWERRVKILRDCALALRYL 177
E + YLV A N+ + L D V L ++ ILR L+Y+
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ----ILR----GLKYI 141
Query: 178 HHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYM 237
H I+HRD+K +N+ + E E K+ DFGLA+ E T T Y PE M
Sbjct: 142 H---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIM 194
Query: 238 TN-AKLTCASDIYSFGIVALQLLSGQKVI 265
N DI+S G + +LL+G+ +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ G
Sbjct: 73 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGG 126
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+++ ++ ++
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLMIDQQGYIQV 182
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 183 TDFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ A G
Sbjct: 73 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 126
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+L+ ++ ++
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIQV 182
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ P + + A D ++ G++ ++ +G
Sbjct: 183 TDFGFAKRV---KGRTWX-LCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 88/206 (42%), Gaps = 26/206 (12%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G V +G VA+K + + + + RE+ L ++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 129 CV------EGGEQYLVYEFCAA--GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + YLV A N+ K LT + ++ L+Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLIYQILRGLKYIH-- 148
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN- 239
I+HRD+K +N+ + E E K+ DFGLA+ E T T Y PE M N
Sbjct: 149 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 203
Query: 240 AKLTCASDIYSFGIVALQLLSGQKVI 265
DI+S G + +LL+G+ +
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 32/209 (15%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G V +G VA+K + + + + RE+ L ++H N++ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 129 CV------EGGEQYLVYEFCAA--GNLAQ-HLLRKDSV--LTWERRVKILRDCALALRYL 177
E + YLV A N+ + L D V L ++ ILR L+Y+
Sbjct: 100 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ----ILR----GLKYI 151
Query: 178 HHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYM 237
H I+HRD+K +N+ + E E K+ DFGLA+ E T T Y PE M
Sbjct: 152 H---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIM 204
Query: 238 TN-AKLTCASDIYSFGIVALQLLSGQKVI 265
N DI+S G + +LL+G+ +
Sbjct: 205 LNWMHYNQTVDIWSVGCIMAELLTGRTLF 233
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 106/258 (41%), Gaps = 48/258 (18%)
Query: 74 LGRGSAGLVYKG--VLPSGQVVAIKHI-YKSNNTDSFSREVEGLSRVRHPNLVCLFGCCV 130
LG+G+ G V K L S + AIK I + + EV L+ + H +V + +
Sbjct: 14 LGQGAFGQVVKARNALDS-RYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 131 E-------------GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYL 177
E ++ E+C G L + ++ + ++ R AL Y+
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 178 HHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAK-------MLGMEESKV------FTD 224
H I+HRD+K NI + E K+ DFGLAK +L ++ + T
Sbjct: 133 H---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 225 VRGTIGYMDPEYMT-NAKLTCASDIYSFGIVALQLL----SGQKVIELDFDARDQLTRKA 279
GT Y+ E + D+YS GI+ +++ +G + R + +K
Sbjct: 190 AIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGME--------RVNILKKL 241
Query: 280 RDVSMGKRPIKDFEDPRL 297
R VS+ P DF+D ++
Sbjct: 242 RSVSIEFPP--DFDDNKM 257
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 89/201 (44%), Gaps = 24/201 (11%)
Query: 74 LGRGSAGLV---YKGVLPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLF 126
+G G+ G+V + VL G VA+K + + + + RE+ L V H N++ L
Sbjct: 32 IGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLL 89
Query: 127 GCCV------EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + YLV E A NL Q + + L ER +L +++LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDA-NLCQVIHME---LDHERMSYLLYQMLCGIKHLH-- 143
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNA 240
I+HRD+K +NI++ K+ DFGLA+ + + T T Y PE +
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACT--NFMMTPYVVTRYYRAPEVILGM 200
Query: 241 KLTCASDIYSFGIVALQLLSG 261
DI+S G + +L+ G
Sbjct: 201 GYAANVDIWSVGCIMGELVKG 221
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 99/232 (42%), Gaps = 28/232 (12%)
Query: 74 LGRGSAGLV---YKGVLPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLF 126
+G G+ G+V + VL G VA+K + + + + RE+ L V H N++ L
Sbjct: 30 IGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLL 87
Query: 127 GCCV------EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + YLV E A NL Q + + L ER +L +++LH
Sbjct: 88 NVFTPQKTLEEFQDVYLVMELMDA-NLCQVIHME---LDHERMSYLLYQMLCGIKHLH-- 141
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNA 240
I+HRD+K +NI++ K+ DFGLA+ + + T T Y PE +
Sbjct: 142 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAST--NFMMTPYVVTRYYRAPEVILGM 198
Query: 241 KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDF 292
DI+S G + +L+ G + F D + + + + P +F
Sbjct: 199 GYKENVDIWSVGCIMGELVKGSVI----FQGTDHIDQWNKVIEQLGTPSAEF 246
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQ-HLLRKDSV-- 157
RE+ L ++H N++ L E + YLV A N+ + L D V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 158 LTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217
L ++ ILR L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 130 LIYQ----ILR----GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 178
Query: 218 ESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVI 265
T T Y PE M N DI+S G + +LL+G+ +
Sbjct: 179 ----MTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQ-HLLRKDSV-- 157
RE+ L ++H N++ L E + YLV A N+ + L D V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 158 LTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217
L ++ ILR L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 130 LIYQ----ILR----GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 178
Query: 218 ESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVI 265
T T Y PE M N DI+S G + +LL+G+ +
Sbjct: 179 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 80/176 (45%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P L L + Y+V E+ G
Sbjct: 74 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGG 127
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+++ ++ K+
Sbjct: 128 EMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLMIDQQGYIKV 183
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 184 TDFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 21/166 (12%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQHLLRKDSVLTW 160
RE+ L ++H N++ L E + YLV A N+ K LT
Sbjct: 99 RELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTD 153
Query: 161 ERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220
+ ++ L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 154 DHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 207
Query: 221 VFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVI 265
T T Y PE M N DI+S G + +LL+G+ +
Sbjct: 208 -MTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLF 252
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 10/182 (5%)
Query: 89 SGQVVAIKHIYKSNNTD-SFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNL 147
S ++VA+K+I + D + RE+ +RHPN+V + +V E+ + G L
Sbjct: 43 SNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 102
Query: 148 AQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLS- 206
+ + E R + + Y H + HRD+KL N LL P+L
Sbjct: 103 FERICNAGRFSEDEARF-FFQQLISGVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKI 158
Query: 207 -DFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTC-ASDIYSFGIVALQLLSGQKV 264
FG +K + T GT Y+ PE + + +D++S G+ +L G
Sbjct: 159 CAFGYSKSSVLHSQPKST--VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
Query: 265 IE 266
E
Sbjct: 217 FE 218
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 76/176 (43%), Gaps = 22/176 (12%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQHLLRKDSVLTW 160
RE+ L ++H N++ L E + YLV A N+ K LT
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTD 120
Query: 161 ERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220
+ ++ L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 121 DHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 174
Query: 221 VFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQL 275
T T Y PE M N DI+S G + +LL+G+ + D DQL
Sbjct: 175 -MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP-GTDHIDQL 228
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 92/216 (42%), Gaps = 27/216 (12%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G V +G VA+K + + + + RE+ L ++H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 129 CV------EGGEQYLVYEFCAA--GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + YLV A N+ K LT + ++ L+Y+H
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLIYQILRGLKYIH-- 162
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN- 239
I+HRD+K +N+ + E E K+ DFGLA+ E T T Y PE M N
Sbjct: 163 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 217
Query: 240 AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQL 275
DI+S G + +LL+G+ + D DQL
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGRTLFP-GTDHIDQL 252
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 92/216 (42%), Gaps = 27/216 (12%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G V +G VA+K + + + + RE+ L ++H N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 129 CV------EGGEQYLVYEFCAA--GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + YLV A N+ K LT + ++ L+Y+H
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLIYQILRGLKYIH-- 161
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN- 239
I+HRD+K +N+ + E E K+ DFGLA+ E T T Y PE M N
Sbjct: 162 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 216
Query: 240 AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQL 275
DI+S G + +LL+G+ + D DQL
Sbjct: 217 MHYNQTVDIWSVGCIMAELLTGRTLFP-GTDHIDQL 251
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQ-HLLRKDSV-- 157
RE+ L ++H N++ L E + YLV A N+ + L D V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 158 LTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217
L ++ ILR L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 130 LIYQ----ILR----GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 178
Query: 218 ESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVI 265
T T Y PE M N DI+S G + +LL+G+ +
Sbjct: 179 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQ-HLLRKDSV-- 157
RE+ L ++H N++ L E + YLV A N+ + L D V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 158 LTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217
L ++ ILR L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 130 LIYQ----ILR----GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 178
Query: 218 ESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVI 265
T T Y PE M N DI+S G + +LL+G+ +
Sbjct: 179 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 21/166 (12%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQHLLRKDSVLTW 160
RE+ L ++H N++ L E + YLV A N+ K LT
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTD 130
Query: 161 ERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220
+ ++ L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 131 DHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 184
Query: 221 VFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVI 265
T T Y PE M N DI+S G + +LL+G+ +
Sbjct: 185 -MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQ-HLLRKDSV-- 157
RE+ L ++H N++ L E + YLV A N+ + L D V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 158 LTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217
L ++ ILR L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 130 LIYQ----ILR----GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 178
Query: 218 ESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVI 265
T T Y PE M N DI+S G + +LL+G+ +
Sbjct: 179 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQ-HLLRKDSV-- 157
RE+ L ++H N++ L E + YLV A N+ + L D V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 158 LTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217
L ++ ILR L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 130 LIYQ----ILR----GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 178
Query: 218 ESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVI 265
T T Y PE M N DI+S G + +LL+G+ +
Sbjct: 179 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 91/218 (41%), Gaps = 37/218 (16%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY G+ S + VAIKH+ K +D E+ +RV P V L
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW--GELPNGTRV--PMEVVLLKKVSS 70
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDC--------AL----------- 172
G F L R DS + R++ ++D AL
Sbjct: 71 G--------FSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQ 122
Query: 173 ALRYLHHYIDGCIVHRDIKLTNILLT-EKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGY 231
L + H + ++HRDIK NIL+ + E KL DFG +L + V+TD GT Y
Sbjct: 123 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVY 179
Query: 232 MDPEYMTNAKLTCAS-DIYSFGIVALQLLSGQKVIELD 268
PE++ + S ++S GI+ ++ G E D
Sbjct: 180 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 217
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 21/166 (12%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQHLLRKDSVLTW 160
RE+ L ++H N++ L E + YLV A N+ K LT
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTD 129
Query: 161 ERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220
+ ++ L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 130 DHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 183
Query: 221 VFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVI 265
T T Y PE M N DI+S G + +LL+G+ +
Sbjct: 184 -MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQ-HLLRKDSV-- 157
RE+ L ++H N++ L E + YLV A N+ + L D V
Sbjct: 81 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 140
Query: 158 LTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217
L ++ ILR L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 141 LIYQ----ILR----GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 189
Query: 218 ESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVI 265
T T Y PE M N DI+S G + +LL+G+ +
Sbjct: 190 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 234
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 76/176 (43%), Gaps = 22/176 (12%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQHLLRKDSVLTW 160
RE+ L ++H N++ L E + YLV A N+ K LT
Sbjct: 68 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTD 122
Query: 161 ERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220
+ ++ L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 123 DHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 176
Query: 221 VFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQL 275
T T Y PE M N DI+S G + +LL+G+ + D DQL
Sbjct: 177 -MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP-GTDHIDQL 230
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 76/176 (43%), Gaps = 22/176 (12%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQHLLRKDSVLTW 160
RE+ L ++H N++ L E + YLV A N+ K LT
Sbjct: 67 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTD 121
Query: 161 ERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220
+ ++ L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 122 DHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 175
Query: 221 VFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQL 275
T T Y PE M N DI+S G + +LL+G+ + D DQL
Sbjct: 176 -MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP-GTDHIDQL 229
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQ-HLLRKDSV-- 157
RE+ L ++H N++ L E + YLV A N+ + L D V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 158 LTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217
L ++ ILR L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 130 LIYQ----ILR----GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 178
Query: 218 ESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVI 265
T T Y PE M N DI+S G + +LL+G+ +
Sbjct: 179 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 21/166 (12%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQHLLRKDSVLTW 160
RE+ L ++H N++ L E + YLV A N+ K LT
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTD 136
Query: 161 ERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220
+ ++ L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 137 DHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 190
Query: 221 VFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVI 265
T T Y PE M N DI+S G + +LL+G+ +
Sbjct: 191 -MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQ-HLLRKDSV-- 157
RE+ L ++H N++ L E + YLV A N+ + L D V
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 136
Query: 158 LTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217
L ++ ILR L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 137 LIYQ----ILR----GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 185
Query: 218 ESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVI 265
T T Y PE M N DI+S G + +LL+G+ +
Sbjct: 186 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 80/176 (45%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P L L + Y+V E+ G
Sbjct: 74 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGG 127
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+++ ++ K+
Sbjct: 128 EMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLMIDQQGYIKV 183
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT Y+ PE + + A D ++ G++ ++ +G
Sbjct: 184 TDFGFAKRV---KGRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 21/166 (12%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQHLLRKDSVLTW 160
RE+ L ++H N++ L E + YLV A N+ K LT
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTD 130
Query: 161 ERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220
+ ++ L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 131 DHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 184
Query: 221 VFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVI 265
T T Y PE M N DI+S G + +LL+G+ +
Sbjct: 185 -MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQ-HLLRKDSV-- 157
RE+ L ++H N++ L E + YLV A N+ + L D V
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 134
Query: 158 LTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217
L ++ ILR L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 135 LIYQ----ILR----GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 183
Query: 218 ESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVI 265
T T Y PE M N DI+S G + +LL+G+ +
Sbjct: 184 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQ-HLLRKDSV-- 157
RE+ L ++H N++ L E + YLV A N+ + L D V
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 141
Query: 158 LTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217
L ++ ILR L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 142 LIYQ----ILR----GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 190
Query: 218 ESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVI 265
T T Y PE M N DI+S G + +LL+G+ +
Sbjct: 191 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQ-HLLRKDSV-- 157
RE+ L ++H N++ L E + YLV A N+ + L D V
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 131
Query: 158 LTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217
L ++ ILR L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 132 LIYQ----ILR----GLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE 180
Query: 218 ESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVI 265
T T Y PE M N DI+S G + +LL+G+ +
Sbjct: 181 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQ-HLLRKDSV-- 157
RE+ L ++H N++ L E + YLV A N+ + L D V
Sbjct: 69 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 128
Query: 158 LTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217
L ++ ILR L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 129 LIYQ----ILR----GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 177
Query: 218 ESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVI 265
T T Y PE M N DI+S G + +LL+G+ +
Sbjct: 178 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 222
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQ-HLLRKDSV-- 157
RE+ L ++H N++ L E + YLV A N+ + L D V
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 141
Query: 158 LTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217
L ++ ILR L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 142 LIYQ----ILR----GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 190
Query: 218 ESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVI 265
T T Y PE M N DI+S G + +LL+G+ +
Sbjct: 191 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 51/113 (45%), Gaps = 10/113 (8%)
Query: 153 RKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP----KLSDF 208
R D T +I + A++YLH I HRD+K N+L T K P KL+DF
Sbjct: 153 RGDQAFTEREASEIXKSIGEAIQYLHSI---NIAHRDVKPENLLYTSK-RPNAILKLTDF 208
Query: 209 GLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
G AK S T T Y+ PE + K + D +S G++ LL G
Sbjct: 209 GFAKETTSHNS--LTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCG 259
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 21/166 (12%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQHLLRKDSVLTW 160
RE+ L ++H N++ L E + YLV A N+ K LT
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTD 130
Query: 161 ERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220
+ ++ L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 131 DHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE--- 184
Query: 221 VFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVI 265
T T Y PE M N DI+S G + +LL+G+ +
Sbjct: 185 -MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 21/166 (12%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQHLLRKDSVLTW 160
RE+ L ++H N++ L E + YLV A N+ K LT
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTD 126
Query: 161 ERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220
+ ++ L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 127 DHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 180
Query: 221 VFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVI 265
T T Y PE M N DI+S G + +LL+G+ +
Sbjct: 181 -MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 76/176 (43%), Gaps = 22/176 (12%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQHLLRKDSVLTW 160
RE+ L ++H N++ L E + YLV A N+ K LT
Sbjct: 93 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTD 147
Query: 161 ERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220
+ ++ L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 148 DHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 201
Query: 221 VFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQL 275
T T Y PE M N DI+S G + +LL+G+ + D DQL
Sbjct: 202 -MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP-GTDHIDQL 255
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 21/166 (12%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQHLLRKDSVLTW 160
RE+ L ++H N++ L E + YLV A N+ K LT
Sbjct: 67 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTD 121
Query: 161 ERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220
+ ++ L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 122 DHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 175
Query: 221 VFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVI 265
T T Y PE M N DI+S G + +LL+G+ +
Sbjct: 176 -MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQ-HLLRKDSV-- 157
RE+ L ++H N++ L E + YLV A N+ + L D V
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 131
Query: 158 LTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217
L ++ ILR L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 132 LIYQ----ILR----GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 180
Query: 218 ESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVI 265
T T Y PE M N DI+S G + +LL+G+ +
Sbjct: 181 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQ-HLLRKDSV-- 157
RE+ L ++H N++ L E + YLV A N+ + L D V
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 131
Query: 158 LTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217
L ++ ILR L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 132 LIYQ----ILR----GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 180
Query: 218 ESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVI 265
T T Y PE M N DI+S G + +LL+G+ +
Sbjct: 181 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 88/201 (43%), Gaps = 24/201 (11%)
Query: 74 LGRGSAGLV---YKGVLPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLF 126
+G G+ G+V Y +L VAIK + + + + RE+ + V H N++ L
Sbjct: 34 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 91
Query: 127 GCCV------EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + Y+V E A NL Q + + L ER +L +++LH
Sbjct: 92 NVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQME---LDHERMSYLLYQMLCGIKHLH-- 145
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNA 240
I+HRD+K +NI++ K+ DFGLA+ G S + T Y PE +
Sbjct: 146 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMVPFVVTRYYRAPEVILGM 202
Query: 241 KLTCASDIYSFGIVALQLLSG 261
DI+S G + +++ G
Sbjct: 203 GYKENVDIWSVGCIMGEMIKG 223
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 76/176 (43%), Gaps = 22/176 (12%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQHLLRKDSVLTW 160
RE+ L ++H N++ L E + YLV A N+ K LT
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTD 144
Query: 161 ERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220
+ ++ L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 145 DHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 198
Query: 221 VFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQL 275
T T Y PE M N DI+S G + +LL+G+ + D DQL
Sbjct: 199 -MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP-GTDHIDQL 252
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 76/176 (43%), Gaps = 22/176 (12%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQHLLRKDSVLTW 160
RE+ L ++H N++ L E + YLV A N+ K LT
Sbjct: 89 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTD 143
Query: 161 ERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220
+ ++ L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 144 DHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 197
Query: 221 VFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQL 275
T T Y PE M N DI+S G + +LL+G+ + D DQL
Sbjct: 198 -MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP-GTDHIDQL 251
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQ-HLLRKDSV-- 157
RE+ L ++H N++ L E + YLV A N+ + L D V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 158 LTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217
L ++ ILR L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 130 LIYQ----ILR----GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 178
Query: 218 ESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVI 265
T T Y PE M N DI+S G + +LL+G+ +
Sbjct: 179 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 101/232 (43%), Gaps = 28/232 (12%)
Query: 74 LGRGSAGLV---YKGVLPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLF 126
+G G+ G+V Y +L VAIK + + + + RE+ + V H N++ L
Sbjct: 26 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 83
Query: 127 GCCV------EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + Y+V E A NL Q + + L ER +L +++LH
Sbjct: 84 NVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQME---LDHERMSYLLYQMLCGIKHLH-- 137
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNA 240
I+HRD+K +NI++ K+ DFGLA+ G S + T T Y PE +
Sbjct: 138 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGM 194
Query: 241 KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDF 292
D++S G + +++ K++ F RD + + + + P +F
Sbjct: 195 GYKENVDLWSVGCIMGEMVC-HKIL---FPGRDYIDQWNKVIEQLGTPCPEF 242
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 91/208 (43%), Gaps = 20/208 (9%)
Query: 67 NDWD-RRFLGRGSAGLVYK-GVLPSGQVVAIKHI------YKSNNTDSFSREVEGLSRVR 118
ND+ R +GRG G VY +G++ A+K + K T + + + LS V
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERI-MLSLVS 247
Query: 119 H---PNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALR 175
P +VC+ + + + G+L HL + + R + L L
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILGLE 306
Query: 176 YLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPE 235
++H+ +V+RD+K NILL E ++SD GLA + K V GT GYM PE
Sbjct: 307 HMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHASV-GTHGYMAPE 360
Query: 236 YMTNA-KLTCASDIYSFGIVALQLLSGQ 262
+ ++D +S G + +LL G
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRGH 388
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 91/208 (43%), Gaps = 20/208 (9%)
Query: 67 NDWD-RRFLGRGSAGLVYK-GVLPSGQVVAIKHI------YKSNNTDSFSREVEGLSRVR 118
ND+ R +GRG G VY +G++ A+K + K T + + + LS V
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERI-MLSLVS 247
Query: 119 H---PNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALR 175
P +VC+ + + + G+L HL + + R + L L
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILGLE 306
Query: 176 YLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPE 235
++H+ +V+RD+K NILL E ++SD GLA + K V GT GYM PE
Sbjct: 307 HMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHASV-GTHGYMAPE 360
Query: 236 YMTNA-KLTCASDIYSFGIVALQLLSGQ 262
+ ++D +S G + +LL G
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRGH 388
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 91/208 (43%), Gaps = 20/208 (9%)
Query: 67 NDWD-RRFLGRGSAGLVYK-GVLPSGQVVAIKHI------YKSNNTDSFSREVEGLSRVR 118
ND+ R +GRG G VY +G++ A+K + K T + + + LS V
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERI-MLSLVS 247
Query: 119 H---PNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALR 175
P +VC+ + + + G+L HL + + R + L L
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILGLE 306
Query: 176 YLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPE 235
++H+ +V+RD+K NILL E ++SD GLA + K V GT GYM PE
Sbjct: 307 HMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHASV-GTHGYMAPE 360
Query: 236 YMTNA-KLTCASDIYSFGIVALQLLSGQ 262
+ ++D +S G + +LL G
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRGH 388
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 101/232 (43%), Gaps = 28/232 (12%)
Query: 74 LGRGSAGLV---YKGVLPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLF 126
+G G+ G+V Y +L VAIK + + + + RE+ + V H N++ L
Sbjct: 37 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 94
Query: 127 GCCV------EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + Y+V E A NL Q + + L ER +L +++LH
Sbjct: 95 NVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQME---LDHERMSYLLYQMLCGIKHLH-- 148
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNA 240
I+HRD+K +NI++ K+ DFGLA+ G S + T T Y PE +
Sbjct: 149 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGM 205
Query: 241 KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDF 292
D++S G + +++ K++ F RD + + + + P +F
Sbjct: 206 GYKENVDLWSVGCIMGEMVC-HKIL---FPGRDYIDQWNKVIEQLGTPCPEF 253
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 90/218 (41%), Gaps = 37/218 (16%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY G+ S + VAIKH+ K +D E+ +RV P V L
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW--GELPNGTRV--PMEVVLLKKVSS 66
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDC--------AL----------- 172
G F L R DS + R + ++D AL
Sbjct: 67 G--------FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 118
Query: 173 ALRYLHHYIDGCIVHRDIKLTNILLT-EKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGY 231
L + H + ++HRDIK NIL+ + E KL DFG +L + V+TD GT Y
Sbjct: 119 VLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVY 175
Query: 232 MDPEYMTNAKLTCAS-DIYSFGIVALQLLSGQKVIELD 268
PE++ + S ++S GI+ ++ G E D
Sbjct: 176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 213
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 91/208 (43%), Gaps = 20/208 (9%)
Query: 67 NDWD-RRFLGRGSAGLVYK-GVLPSGQVVAIKHI------YKSNNTDSFSREVEGLSRVR 118
ND+ R +GRG G VY +G++ A+K + K T + + + LS V
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERI-MLSLVS 246
Query: 119 H---PNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALR 175
P +VC+ + + + G+L HL + + R + L L
Sbjct: 247 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILGLE 305
Query: 176 YLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPE 235
++H+ +V+RD+K NILL E ++SD GLA + K V GT GYM PE
Sbjct: 306 HMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHASV-GTHGYMAPE 359
Query: 236 YMTNA-KLTCASDIYSFGIVALQLLSGQ 262
+ ++D +S G + +LL G
Sbjct: 360 VLQKGVAYDSSADWFSLGCMLFKLLRGH 387
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 71/166 (42%), Gaps = 21/166 (12%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQHLLRKDSVLTW 160
RE+ L ++H N++ L E + YLV A N+ K LT
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KSQKLTD 124
Query: 161 ERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220
+ ++ L+Y+H I+HRD+K +N+ + E E K+ DFGL + E
Sbjct: 125 DHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE--- 178
Query: 221 VFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVI 265
T T Y PE M N DI+S G + +LL+G+ +
Sbjct: 179 -MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 96/246 (39%), Gaps = 65/246 (26%)
Query: 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSN----------NTDSFSREVEGLSRVRHPNLV 123
+G+GS G+V + Q AI+ I N + + EV + ++ HPN+
Sbjct: 34 IGQGSYGVVRVAI--ENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIA 91
Query: 124 CLFGCCVEGGEQY--LVYEFCAAGNLAQHL--LRKDSV---------------------- 157
L+ V EQY LV E C G+L L DS
Sbjct: 92 RLYE--VYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEA 149
Query: 158 -----------LTWERRVK----ILRDCALALRYLHHYIDGCIVHRDIKLTNILLT--EK 200
L + +R K I+R AL YLH + I HRDIK N L + +
Sbjct: 150 INGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH---NQGICHRDIKPENFLFSTNKS 206
Query: 201 LEPKLSDFGLAK---MLGMEESKVFTDVRGTIGYMDPEYM--TNAKLTCASDIYSFGIVA 255
E KL DFGL+K L E T GT ++ PE + TN D +S G++
Sbjct: 207 FEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266
Query: 256 LQLLSG 261
LL G
Sbjct: 267 HLLLMG 272
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 90/218 (41%), Gaps = 37/218 (16%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY G+ S + VAIKH+ K +D E+ +RV P V L
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW--GELPNGTRV--PMEVVLLKKVSS 71
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDC--------AL----------- 172
G F L R DS + R + ++D AL
Sbjct: 72 G--------FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 123
Query: 173 ALRYLHHYIDGCIVHRDIKLTNILLT-EKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGY 231
L + H + ++HRDIK NIL+ + E KL DFG +L + V+TD GT Y
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVY 180
Query: 232 MDPEYMTNAKLTCAS-DIYSFGIVALQLLSGQKVIELD 268
PE++ + S ++S GI+ ++ G E D
Sbjct: 181 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 218
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 86 VLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145
+L +VV +K I + N E L V P LV L + Y+V E+ A G
Sbjct: 73 ILDKQKVVKLKQIEHTLN------EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGG 126
Query: 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205
+ HL R R + L YLH +D +++RD+K N+L+ ++ ++
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHS-LD--LIYRDLKPENLLIDQQGYIQV 182
Query: 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG 261
+DFG AK + + + + + GT + PE + + A D ++ G++ ++ +G
Sbjct: 183 TDFGFAKRV---KGRTWX-LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 89/206 (43%), Gaps = 26/206 (12%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G V +G VA+K + + + + RE+ L ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 129 CV------EGGEQYLVYEFCAA--GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + YLV A N+ K LT + ++ L+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLIYQILRGLKYIH-- 142
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN- 239
I+HRD+K +N+ + E E K+ DFGLA+ +E F R Y PE M N
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMAGFVATR---WYRAPEIMLNW 197
Query: 240 AKLTCASDIYSFGIVALQLLSGQKVI 265
DI+S G + +LL+G+ +
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 32/209 (15%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G V +G VA+K + + + + RE+ L ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 129 CV------EGGEQYLVYEFCAA--GNLAQ-HLLRKDSV--LTWERRVKILRDCALALRYL 177
E + YLV A N+ + L D V L ++ ILR L+Y+
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ----ILR----GLKYI 141
Query: 178 HHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYM 237
H I+HRD+K +N+ + E E K+ DFGLA+ +E F R Y PE M
Sbjct: 142 H---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMAGFVATR---WYRAPEIM 194
Query: 238 TN-AKLTCASDIYSFGIVALQLLSGQKVI 265
N DI+S G + +LL+G+ +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 90/218 (41%), Gaps = 37/218 (16%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY G+ S + VAIKH+ K +D E+ +RV P V L
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW--GELPNGTRV--PMEVVLLKKVSS 70
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDC--------AL----------- 172
G F L R DS + R + ++D AL
Sbjct: 71 G--------FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 122
Query: 173 ALRYLHHYIDGCIVHRDIKLTNILLT-EKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGY 231
L + H + ++HRDIK NIL+ + E KL DFG +L + V+TD GT Y
Sbjct: 123 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVY 179
Query: 232 MDPEYMTNAKLTCAS-DIYSFGIVALQLLSGQKVIELD 268
PE++ + S ++S GI+ ++ G E D
Sbjct: 180 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 217
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 102/235 (43%), Gaps = 34/235 (14%)
Query: 74 LGRGSAGLV---YKGVLPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLF 126
+G G+ G+V Y +L VAIK + + + + RE+ + V H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 127 GCCV------EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + Y+V E A NL Q + + L ER +L +++LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQME---LDHERMSYLLYQMLCGIKHLH-- 143
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLG---MEESKVFTDVRGTIGYMDPEYM 237
I+HRD+K +NI++ K+ DFGLA+ G M E +V T Y PE +
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY-----YRAPEVI 197
Query: 238 TNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDF 292
D++S G + +++ K++ F RD + + + + P +F
Sbjct: 198 LGMGYKENVDLWSVGCIMGEMVC-HKIL---FPGRDYIDQWNKVIEQLGTPCPEF 248
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 89/206 (43%), Gaps = 26/206 (12%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G V +G VA+K + + + + RE+ L ++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 129 CV------EGGEQYLVYEFCAA--GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + YLV A N+ K LT + ++ L+Y+H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLIYQILRGLKYIH-- 138
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN- 239
I+HRD+K +N+ + E E K+ DFGLA+ +E F R Y PE M N
Sbjct: 139 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMAGFVATR---WYRAPEIMLNW 193
Query: 240 AKLTCASDIYSFGIVALQLLSGQKVI 265
DI+S G + +LL+G+ +
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 90/218 (41%), Gaps = 37/218 (16%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY G+ S + VAIKH+ K +D E+ +RV P V L
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW--GELPNGTRV--PMEVVLLKKVSS 71
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDC--------AL----------- 172
G F L R DS + R + ++D AL
Sbjct: 72 G--------FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 123
Query: 173 ALRYLHHYIDGCIVHRDIKLTNILLT-EKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGY 231
L + H + ++HRDIK NIL+ + E KL DFG +L + V+TD GT Y
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVY 180
Query: 232 MDPEYMTNAKLTCAS-DIYSFGIVALQLLSGQKVIELD 268
PE++ + S ++S GI+ ++ G E D
Sbjct: 181 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 218
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 90/218 (41%), Gaps = 37/218 (16%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY G+ S + VAIKH+ K +D E+ +RV P V L
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW--GELPNGTRV--PMEVVLLKKVSS 69
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDC--------AL----------- 172
G F L R DS + R + ++D AL
Sbjct: 70 G--------FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 121
Query: 173 ALRYLHHYIDGCIVHRDIKLTNILLT-EKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGY 231
L + H + ++HRDIK NIL+ + E KL DFG +L + V+TD GT Y
Sbjct: 122 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVY 178
Query: 232 MDPEYMTNAKLTCAS-DIYSFGIVALQLLSGQKVIELD 268
PE++ + S ++S GI+ ++ G E D
Sbjct: 179 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 216
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 101/235 (42%), Gaps = 34/235 (14%)
Query: 74 LGRGSAGLV---YKGVLPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLF 126
+G G+ G+V Y +L VAIK + + + + RE+ + V H N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 127 GCCV------EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + Y+V E A NL Q + + L ER +L +++LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQME---LDHERMSYLLYQMLCGIKHLH-- 143
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLG---MEESKVFTDVRGTIGYMDPEYM 237
I+HRD+K +NI++ K+ DFGLA+ G M E +V T Y PE +
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY-----YRAPEVI 197
Query: 238 TNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDF 292
DI+S G + +++ K++ F RD + + + + P F
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVC-HKIL---FPGRDYIDQWNKVIEQLGTPCPAF 248
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 91/218 (41%), Gaps = 37/218 (16%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY G+ S + VAIKH+ K +D E+ +RV P V L
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW--GELPNGTRV--PMEVVLLKKVSS 85
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDC--------AL----------- 172
G F L R DS + R + ++D AL
Sbjct: 86 G--------FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 137
Query: 173 ALRYLHHYIDGCIVHRDIKLTNILLT-EKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGY 231
L + H + ++HRDIK NIL+ + E KL DFG +L + V+TD GT Y
Sbjct: 138 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVY 194
Query: 232 MDPEYMTNAKLTC-ASDIYSFGIVALQLLSGQKVIELD 268
PE++ + ++ ++S GI+ ++ G E D
Sbjct: 195 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 232
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 91/218 (41%), Gaps = 37/218 (16%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY G+ S + VAIKH+ K +D E+ +RV P V L
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW--GELPNGTRV--PMEVVLLKKVSS 66
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDC--------AL----------- 172
G F L R DS + R + ++D AL
Sbjct: 67 G--------FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 118
Query: 173 ALRYLHHYIDGCIVHRDIKLTNILLT-EKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGY 231
L + H + ++HRDIK NIL+ + E KL DFG +L + V+TD GT Y
Sbjct: 119 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVY 175
Query: 232 MDPEYMTNAKLTC-ASDIYSFGIVALQLLSGQKVIELD 268
PE++ + ++ ++S GI+ ++ G E D
Sbjct: 176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 213
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 21/166 (12%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQHLLRKDSVLTW 160
RE+ L ++H N++ L E + YLV A N+ K LT
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTD 124
Query: 161 ERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220
+ ++ L+Y+H I+HRD+K +N+ + E E K+ D+GLA+ E
Sbjct: 125 DHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDE--- 178
Query: 221 VFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVI 265
T T Y PE M N DI+S G + +LL+G+ +
Sbjct: 179 -MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 91/218 (41%), Gaps = 37/218 (16%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY G+ S + VAIKH+ K +D E+ +RV P V L
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW--GELPNGTRV--PMEVVLLKKVSS 85
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDC--------AL----------- 172
G F L R DS + R + ++D AL
Sbjct: 86 G--------FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 137
Query: 173 ALRYLHHYIDGCIVHRDIKLTNILLT-EKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGY 231
L + H + ++HRDIK NIL+ + E KL DFG +L + V+TD GT Y
Sbjct: 138 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVY 194
Query: 232 MDPEYMTNAKLTC-ASDIYSFGIVALQLLSGQKVIELD 268
PE++ + ++ ++S GI+ ++ G E D
Sbjct: 195 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 232
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 90/218 (41%), Gaps = 37/218 (16%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY G+ S + VAIKH+ K +D E+ +RV P V L
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW--GELPNGTRV--PMEVVLLKKVSS 71
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDC--------AL----------- 172
G F L R DS + R + ++D AL
Sbjct: 72 G--------FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 123
Query: 173 ALRYLHHYIDGCIVHRDIKLTNILLT-EKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGY 231
L + H + ++HRDIK NIL+ + E KL DFG +L + V+TD GT Y
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVY 180
Query: 232 MDPEYMTNAKLTCAS-DIYSFGIVALQLLSGQKVIELD 268
PE++ + S ++S GI+ ++ G E D
Sbjct: 181 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 218
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 91/218 (41%), Gaps = 37/218 (16%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY G+ S + VAIKH+ K +D E+ +RV P V L
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW--GELPNGTRV--PMEVVLLKKVSS 86
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDC--------AL----------- 172
G F L R DS + R + ++D AL
Sbjct: 87 G--------FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 138
Query: 173 ALRYLHHYIDGCIVHRDIKLTNILLT-EKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGY 231
L + H + ++HRDIK NIL+ + E KL DFG +L + V+TD GT Y
Sbjct: 139 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVY 195
Query: 232 MDPEYMTNAKLTC-ASDIYSFGIVALQLLSGQKVIELD 268
PE++ + ++ ++S GI+ ++ G E D
Sbjct: 196 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 233
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 91/218 (41%), Gaps = 37/218 (16%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY G+ S + VAIKH+ K +D E+ +RV P V L
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW--GELPNGTRV--PMEVVLLKKVSS 93
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDC--------AL----------- 172
G F L R DS + R + ++D AL
Sbjct: 94 G--------FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 145
Query: 173 ALRYLHHYIDGCIVHRDIKLTNILLT-EKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGY 231
L + H + ++HRDIK NIL+ + E KL DFG +L + V+TD GT Y
Sbjct: 146 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVY 202
Query: 232 MDPEYMTNAKLTC-ASDIYSFGIVALQLLSGQKVIELD 268
PE++ + ++ ++S GI+ ++ G E D
Sbjct: 203 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 240
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 91/218 (41%), Gaps = 37/218 (16%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY G+ S + VAIKH+ K +D E+ +RV P V L
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW--GELPNGTRV--PMEVVLLKKVSS 66
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDC--------AL----------- 172
G F L R DS + R + ++D AL
Sbjct: 67 G--------FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 118
Query: 173 ALRYLHHYIDGCIVHRDIKLTNILLT-EKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGY 231
L + H + ++HRDIK NIL+ + E KL DFG +L + V+TD GT Y
Sbjct: 119 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVY 175
Query: 232 MDPEYMTNAKLTC-ASDIYSFGIVALQLLSGQKVIELD 268
PE++ + ++ ++S GI+ ++ G E D
Sbjct: 176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 213
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 91/218 (41%), Gaps = 37/218 (16%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY G+ S + VAIKH+ K +D E+ +RV P V L
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW--GELPNGTRV--PMEVVLLKKVSS 86
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDC--------AL----------- 172
G F L R DS + R + ++D AL
Sbjct: 87 G--------FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 138
Query: 173 ALRYLHHYIDGCIVHRDIKLTNILLT-EKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGY 231
L + H + ++HRDIK NIL+ + E KL DFG +L + V+TD GT Y
Sbjct: 139 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVY 195
Query: 232 MDPEYMTNAKLTC-ASDIYSFGIVALQLLSGQKVIELD 268
PE++ + ++ ++S GI+ ++ G E D
Sbjct: 196 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 233
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 90/209 (43%), Gaps = 23/209 (11%)
Query: 72 RFLGRGSAGLVYKGVLP----SGQVVAIK----HIYKSNNTDSFSREVEGLSRVRHPNLV 123
R LG+G G V + L S VA+K I S++ + F RE + HP++
Sbjct: 29 RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVA 88
Query: 124 CLFGCCVEGGEQ------YLVYEFCAAGNLAQHLL-----RKDSVLTWERRVKILRDCAL 172
L G + + ++ F G+L LL L + V+ + D A
Sbjct: 89 KLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIAC 148
Query: 173 ALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLA-KMLGMEESKVFTDVRGTIGY 231
+ YL +HRD+ N +L E + ++DFGL+ K+ + + + + +
Sbjct: 149 GMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKW 205
Query: 232 MDPEYMTNAKLTCASDIYSFGIVALQLLS 260
+ E + + T SD+++FG+ ++++
Sbjct: 206 LALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 91/218 (41%), Gaps = 37/218 (16%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY G+ S + VAIKH+ K +D E+ +RV P V L
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW--GELPNGTRV--PMEVVLLKKVSS 98
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDC--------AL----------- 172
G F L R DS + R + ++D AL
Sbjct: 99 G--------FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 150
Query: 173 ALRYLHHYIDGCIVHRDIKLTNILLT-EKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGY 231
L + H + ++HRDIK NIL+ + E KL DFG +L + V+TD GT Y
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVY 207
Query: 232 MDPEYMTNAKLTC-ASDIYSFGIVALQLLSGQKVIELD 268
PE++ + ++ ++S GI+ ++ G E D
Sbjct: 208 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 245
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 91/218 (41%), Gaps = 37/218 (16%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY G+ S + VAIKH+ K +D E+ +RV P V L
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW--GELPNGTRV--PMEVVLLKKVSS 86
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDC--------AL----------- 172
G F L R DS + R + ++D AL
Sbjct: 87 G--------FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 138
Query: 173 ALRYLHHYIDGCIVHRDIKLTNILLT-EKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGY 231
L + H + ++HRDIK NIL+ + E KL DFG +L + V+TD GT Y
Sbjct: 139 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVY 195
Query: 232 MDPEYMTNAKLTC-ASDIYSFGIVALQLLSGQKVIELD 268
PE++ + ++ ++S GI+ ++ G E D
Sbjct: 196 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 233
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 91/218 (41%), Gaps = 37/218 (16%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY G+ S + VAIKH+ K +D E+ +RV P V L
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW--GELPNGTRV--PMEVVLLKKVSS 105
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDC--------AL----------- 172
G F L R DS + R + ++D AL
Sbjct: 106 G--------FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 157
Query: 173 ALRYLHHYIDGCIVHRDIKLTNILLT-EKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGY 231
L + H + ++HRDIK NIL+ + E KL DFG +L + V+TD GT Y
Sbjct: 158 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVY 214
Query: 232 MDPEYMTNAKLTC-ASDIYSFGIVALQLLSGQKVIELD 268
PE++ + ++ ++S GI+ ++ G E D
Sbjct: 215 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 252
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 91/218 (41%), Gaps = 37/218 (16%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY G+ S + VAIKH+ K +D E+ +RV P V L
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW--GELPNGTRV--PMEVVLLKKVSS 99
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDC--------AL----------- 172
G F L R DS + R + ++D AL
Sbjct: 100 G--------FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 151
Query: 173 ALRYLHHYIDGCIVHRDIKLTNILLT-EKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGY 231
L + H + ++HRDIK NIL+ + E KL DFG +L + V+TD GT Y
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVY 208
Query: 232 MDPEYMTNAKLTC-ASDIYSFGIVALQLLSGQKVIELD 268
PE++ + ++ ++S GI+ ++ G E D
Sbjct: 209 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 246
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 91/218 (41%), Gaps = 37/218 (16%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY G+ S + VAIKH+ K +D E+ +RV P V L
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW--GELPNGTRV--PMEVVLLKKVSS 99
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDC--------AL----------- 172
G F L R DS + R + ++D AL
Sbjct: 100 G--------FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 151
Query: 173 ALRYLHHYIDGCIVHRDIKLTNILLT-EKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGY 231
L + H + ++HRDIK NIL+ + E KL DFG +L + V+TD GT Y
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVY 208
Query: 232 MDPEYMTNAKLTC-ASDIYSFGIVALQLLSGQKVIELD 268
PE++ + ++ ++S GI+ ++ G E D
Sbjct: 209 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 246
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 91/218 (41%), Gaps = 37/218 (16%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY G+ S + VAIKH+ K +D E+ +RV P V L
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW--GELPNGTRV--PMEVVLLKKVSS 99
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDC--------AL----------- 172
G F L R DS + R + ++D AL
Sbjct: 100 G--------FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 151
Query: 173 ALRYLHHYIDGCIVHRDIKLTNILLT-EKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGY 231
L + H + ++HRDIK NIL+ + E KL DFG +L + V+TD GT Y
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVY 208
Query: 232 MDPEYMTNAKLTC-ASDIYSFGIVALQLLSGQKVIELD 268
PE++ + ++ ++S GI+ ++ G E D
Sbjct: 209 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 246
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 91/218 (41%), Gaps = 37/218 (16%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY G+ S + VAIKH+ K +D E+ +RV P V L
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW--GELPNGTRV--PMEVVLLKKVSS 98
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDC--------AL----------- 172
G F L R DS + R + ++D AL
Sbjct: 99 G--------FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 150
Query: 173 ALRYLHHYIDGCIVHRDIKLTNILLT-EKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGY 231
L + H + ++HRDIK NIL+ + E KL DFG +L + V+TD GT Y
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVY 207
Query: 232 MDPEYMTNAKLTC-ASDIYSFGIVALQLLSGQKVIELD 268
PE++ + ++ ++S GI+ ++ G E D
Sbjct: 208 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 245
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 91/218 (41%), Gaps = 37/218 (16%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY G+ S + VAIKH+ K +D E+ +RV P V L
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW--GELPNGTRV--PMEVVLLKKVSS 98
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDC--------AL----------- 172
G F L R DS + R + ++D AL
Sbjct: 99 G--------FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 150
Query: 173 ALRYLHHYIDGCIVHRDIKLTNILLT-EKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGY 231
L + H + ++HRDIK NIL+ + E KL DFG +L + V+TD GT Y
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVY 207
Query: 232 MDPEYMTNAKLTC-ASDIYSFGIVALQLLSGQKVIELD 268
PE++ + ++ ++S GI+ ++ G E D
Sbjct: 208 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 245
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 91/218 (41%), Gaps = 37/218 (16%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY G+ S + VAIKH+ K +D E+ +RV P V L
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW--GELPNGTRV--PMEVVLLKKVSS 113
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDC--------AL----------- 172
G F L R DS + R + ++D AL
Sbjct: 114 G--------FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 165
Query: 173 ALRYLHHYIDGCIVHRDIKLTNILLT-EKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGY 231
L + H + ++HRDIK NIL+ + E KL DFG +L + V+TD GT Y
Sbjct: 166 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVY 222
Query: 232 MDPEYMTNAKLTC-ASDIYSFGIVALQLLSGQKVIELD 268
PE++ + ++ ++S GI+ ++ G E D
Sbjct: 223 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 260
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 91/218 (41%), Gaps = 37/218 (16%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY G+ S + VAIKH+ K +D E+ +RV P V L
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW--GELPNGTRV--PMEVVLLKKVSS 98
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDC--------AL----------- 172
G F L R DS + R + ++D AL
Sbjct: 99 G--------FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 150
Query: 173 ALRYLHHYIDGCIVHRDIKLTNILLT-EKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGY 231
L + H + ++HRDIK NIL+ + E KL DFG +L + V+TD GT Y
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVY 207
Query: 232 MDPEYMTNAKLTC-ASDIYSFGIVALQLLSGQKVIELD 268
PE++ + ++ ++S GI+ ++ G E D
Sbjct: 208 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 245
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 91/218 (41%), Gaps = 37/218 (16%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY G+ S + VAIKH+ K +D E+ +RV P V L
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW--GELPNGTRV--PMEVVLLKKVSS 99
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDC--------AL----------- 172
G F L R DS + R + ++D AL
Sbjct: 100 G--------FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 151
Query: 173 ALRYLHHYIDGCIVHRDIKLTNILLT-EKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGY 231
L + H + ++HRDIK NIL+ + E KL DFG +L + V+TD GT Y
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVY 208
Query: 232 MDPEYMTNAKLTC-ASDIYSFGIVALQLLSGQKVIELD 268
PE++ + ++ ++S GI+ ++ G E D
Sbjct: 209 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 246
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 71 RRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLVCL 125
+ +GRGS G VY + + VAIK + + + RE+ L+R++ ++ L
Sbjct: 33 KHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRL 92
Query: 126 FGCCV-----EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVK-ILRDCALALRYLHH 179
+ + E Y+V E A +L + L K + E+ VK IL + L +++H
Sbjct: 93 HDLIIPEDLLKFDELYIVLEI-ADSDLKK--LFKTPIFLTEQHVKTILYNLLLGEKFIH- 148
Query: 180 YIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE 218
+ I+HRD+K N LL + K+ DFGLA+ + ++
Sbjct: 149 --ESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDK 185
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 91/218 (41%), Gaps = 37/218 (16%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY G+ S + VAIKH+ K +D E+ +RV P V L
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW--GELPNGTRV--PMEVVLLKKVSS 113
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDC--------AL----------- 172
G F L R DS + R + ++D AL
Sbjct: 114 G--------FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 165
Query: 173 ALRYLHHYIDGCIVHRDIKLTNILLT-EKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGY 231
L + H + ++HRDIK NIL+ + E KL DFG +L + V+TD GT Y
Sbjct: 166 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVY 222
Query: 232 MDPEYMTNAKLTC-ASDIYSFGIVALQLLSGQKVIELD 268
PE++ + ++ ++S GI+ ++ G E D
Sbjct: 223 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 260
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 91/218 (41%), Gaps = 37/218 (16%)
Query: 73 FLGRGSAGLVYKGVLPSGQV-VAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVE 131
LG G G VY G+ S + VAIKH+ K +D E+ +RV P V L
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW--GELPNGTRV--PMEVVLLKKVSS 118
Query: 132 GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDC--------AL----------- 172
G F L R DS + R + ++D AL
Sbjct: 119 G--------FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 170
Query: 173 ALRYLHHYIDGCIVHRDIKLTNILLT-EKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGY 231
L + H + ++HRDIK NIL+ + E KL DFG +L + V+TD GT Y
Sbjct: 171 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVY 227
Query: 232 MDPEYMTNAKLTC-ASDIYSFGIVALQLLSGQKVIELD 268
PE++ + ++ ++S GI+ ++ G E D
Sbjct: 228 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 265
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 91/216 (42%), Gaps = 27/216 (12%)
Query: 74 LGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTDSFS----REVEGLSRVRHPNLVCLFGC 128
+G G+ G V +G VA+K + + + + RE+ L ++H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 129 CV------EGGEQYLVYEFCAA--GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHY 180
E + YLV A N+ K LT + ++ L+Y+H
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTDDHVQFLIYQILRGLKYIH-- 162
Query: 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN- 239
I+HRD+K +N+ + E E K+ DFGLA+ E T Y PE M N
Sbjct: 163 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MXGXVATRWYRAPEIMLNW 217
Query: 240 AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQL 275
DI+S G + +LL+G+ + D DQL
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGRTLFP-GTDHIDQL 252
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 72 RFLGRGSAGLVYKGVLPSG-QVVAIK-----HIYKSNNTDSFSREVEGLSRVRHPNLVCL 125
+ +GRG+ G V L + +V A+K + K T F E + L + L
Sbjct: 80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTL 139
Query: 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLH--HYIDG 183
+ YLV ++ G+L L + + L E L + +A+ +H HY
Sbjct: 140 HYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHY--- 196
Query: 184 CIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVR-GTIGYMDPEYMT---- 238
VHRDIK NIL+ +L+DFG L ME+ V + V GT Y+ PE +
Sbjct: 197 --VHRDIKPDNILMDMNGHIRLADFGSCLKL-MEDGTVQSSVAVGTPDYISPEILQAMEG 253
Query: 239 -NAKLTCASDIYSFGIVALQLLSGQ 262
+ D +S G+ ++L G+
Sbjct: 254 GKGRYGPECDWWSLGVCMYEMLYGE 278
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 71/166 (42%), Gaps = 21/166 (12%)
Query: 109 REVEGLSRVRHPNLVCLFGCCV------EGGEQYLVYEFCAA--GNLAQHLLRKDSVLTW 160
RE+ L ++H N++ L E + YLV A N+ K LT
Sbjct: 93 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KCQKLTD 147
Query: 161 ERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220
+ ++ L+Y+H I+HRD+K +N+ + E E K+ DFGLA+ E
Sbjct: 148 DHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 201
Query: 221 VFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVI 265
T Y PE M N DI+S G + +LL+G+ +
Sbjct: 202 -MXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 246
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 9/208 (4%)
Query: 63 NAINNDW--DRRFLGRGSAGLVYK------GVLPSGQVVAIKHIYKSNNTDSFSREVEGL 114
+ DW D R LGRG G V+ G L + + + K + K E + L
Sbjct: 180 QPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKIL 239
Query: 115 SRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALAL 174
++V +V L + LV G++ H+ D + + + A +
Sbjct: 240 AKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIV 299
Query: 175 RYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDP 234
L H I++RD+K N+LL + ++SD GLA L ++K GT G+M P
Sbjct: 300 SGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT-KGYAGTPGFMAP 358
Query: 235 EYMTNAKLTCASDIYSFGIVALQLLSGQ 262
E + + + D ++ G+ ++++ +
Sbjct: 359 ELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 22/153 (14%)
Query: 114 LSRVRHPNLVCLFGCCVEGGEQ------YLVYEFCAAGNLAQHLLRKDSVLTWERRVKIL 167
L+ V HP++V +F VE ++ Y+V E+ +L + K L + L
Sbjct: 133 LAEVVHPSIVQIFNF-VEHTDRHGDPVGYIVMEYVGGQSLKRS---KGQKLPVAEAIAYL 188
Query: 168 RDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRG 227
+ AL YLH +V+ D+K NI+LTE+ + KL D G + F + G
Sbjct: 189 LEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSRI-----NSFGYLYG 239
Query: 228 TIGYMDPEYMTNAKLTCASDIYSFG--IVALQL 258
T G+ PE + T A+DIY+ G + AL L
Sbjct: 240 TPGFQAPEIVRTGP-TVATDIYTVGRTLAALTL 271
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 9/208 (4%)
Query: 63 NAINNDW--DRRFLGRGSAGLVYK------GVLPSGQVVAIKHIYKSNNTDSFSREVEGL 114
+ DW D R LGRG G V+ G L + + + K + K E + L
Sbjct: 180 QPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKIL 239
Query: 115 SRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALAL 174
++V +V L + LV G++ H+ D + + + A +
Sbjct: 240 AKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIV 299
Query: 175 RYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDP 234
L H I++RD+K N+LL + ++SD GLA L ++K GT G+M P
Sbjct: 300 SGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT-KGYAGTPGFMAP 358
Query: 235 EYMTNAKLTCASDIYSFGIVALQLLSGQ 262
E + + + D ++ G+ ++++ +
Sbjct: 359 ELLLGEEYDFSVDYFALGVTLYEMIAAR 386
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,295,912
Number of Sequences: 62578
Number of extensions: 439381
Number of successful extensions: 3257
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 215
Number of HSP's that attempted gapping in prelim test: 1085
Number of HSP's gapped (non-prelim): 1127
length of query: 347
length of database: 14,973,337
effective HSP length: 100
effective length of query: 247
effective length of database: 8,715,537
effective search space: 2152737639
effective search space used: 2152737639
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)