Query 040826
Match_columns 347
No_of_seqs 225 out of 2919
Neff 10.2
Searched_HMMs 46136
Date Fri Mar 29 12:12:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040826.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040826hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 100.0 4.7E-56 1E-60 397.8 28.7 285 52-338 61-353 (361)
2 KOG0197 Tyrosine kinases [Sign 100.0 6.2E-52 1.3E-56 368.2 24.9 264 52-340 199-464 (468)
3 KOG0581 Mitogen-activated prot 100.0 1.8E-52 4E-57 355.9 18.5 250 68-333 81-335 (364)
4 KOG0192 Tyrosine kinase specif 100.0 5.4E-51 1.2E-55 362.7 24.3 252 71-341 46-307 (362)
5 KOG0575 Polo-like serine/threo 100.0 1.3E-50 2.8E-55 363.7 22.3 246 66-333 18-269 (592)
6 KOG0591 NIMA (never in mitosis 100.0 6.8E-51 1.5E-55 333.3 10.0 254 67-337 20-285 (375)
7 KOG0615 Serine/threonine prote 100.0 9.5E-50 2.1E-54 342.2 14.7 252 64-333 170-437 (475)
8 KOG0595 Serine/threonine-prote 100.0 1E-48 2.2E-53 336.0 19.3 246 65-330 9-265 (429)
9 KOG0593 Predicted protein kina 100.0 1.4E-48 3.1E-53 322.7 15.3 260 67-332 3-283 (396)
10 KOG0598 Ribosomal protein S6 k 100.0 5.4E-48 1.2E-52 328.5 16.5 240 65-325 24-269 (357)
11 KOG0600 Cdc2-related protein k 100.0 6.3E-47 1.4E-51 332.4 19.3 263 65-332 116-399 (560)
12 KOG1026 Nerve growth factor re 100.0 2.8E-47 6.1E-52 354.5 17.8 257 66-341 486-766 (774)
13 KOG0661 MAPK related serine/th 100.0 2.1E-47 4.5E-52 333.1 12.3 261 65-333 9-291 (538)
14 KOG0198 MEKK and related serin 100.0 1.7E-46 3.7E-51 324.3 16.9 252 67-335 18-278 (313)
15 KOG0659 Cdk activating kinase 100.0 4.8E-46 1E-50 302.5 18.5 261 66-333 2-281 (318)
16 KOG0592 3-phosphoinositide-dep 100.0 2.8E-46 6E-51 330.9 18.4 250 63-333 70-338 (604)
17 KOG0193 Serine/threonine prote 100.0 9.9E-47 2.1E-51 337.6 15.6 263 59-339 385-655 (678)
18 KOG0583 Serine/threonine prote 100.0 2.5E-45 5.3E-50 329.4 23.5 247 64-331 15-273 (370)
19 KOG0582 Ste20-like serine/thre 100.0 2.9E-45 6.2E-50 317.5 21.7 258 65-332 25-292 (516)
20 cd05102 PTKc_VEGFR3 Catalytic 100.0 2.9E-45 6.3E-50 330.6 22.8 258 65-340 6-337 (338)
21 KOG0578 p21-activated serine/t 100.0 9.4E-46 2E-50 329.9 16.4 248 66-333 273-523 (550)
22 KOG0196 Tyrosine kinase, EPH ( 100.0 2.5E-46 5.4E-51 343.0 12.6 255 69-342 632-896 (996)
23 KOG1095 Protein tyrosine kinas 100.0 1.2E-45 2.6E-50 355.3 17.2 256 69-342 695-966 (1025)
24 cd05064 PTKc_EphR_A10 Catalyti 100.0 2.2E-44 4.8E-49 314.1 21.9 253 66-337 5-265 (266)
25 KOG0616 cAMP-dependent protein 100.0 1E-44 2.2E-49 299.0 17.3 234 66-324 44-283 (355)
26 cd05114 PTKc_Tec_Rlk Catalytic 100.0 6.1E-44 1.3E-48 309.5 22.4 250 66-334 4-255 (256)
27 PHA02988 hypothetical protein; 100.0 2E-43 4.4E-48 310.5 26.0 259 52-338 11-280 (283)
28 KOG4721 Serine/threonine prote 100.0 1.7E-45 3.8E-50 327.1 11.7 241 70-337 128-368 (904)
29 KOG1094 Discoidin domain recep 100.0 5.7E-44 1.2E-48 318.2 20.7 259 67-337 539-804 (807)
30 KOG0194 Protein tyrosine kinas 100.0 6.4E-45 1.4E-49 328.2 14.6 260 61-341 152-424 (474)
31 cd05096 PTKc_DDR1 Catalytic do 100.0 2.1E-43 4.6E-48 313.9 24.0 258 66-335 5-303 (304)
32 KOG0588 Serine/threonine prote 100.0 2.6E-44 5.6E-49 325.0 18.1 243 68-333 14-263 (786)
33 KOG0597 Serine-threonine prote 100.0 2.1E-44 4.6E-49 320.0 16.0 244 66-332 2-250 (808)
34 cd05104 PTKc_Kit Catalytic dom 100.0 1.7E-43 3.6E-48 322.9 22.3 255 65-337 34-374 (375)
35 KOG0580 Serine/threonine prote 100.0 3.7E-44 7.9E-49 287.4 15.4 246 65-333 21-273 (281)
36 cd05631 STKc_GRK4 Catalytic do 100.0 2.6E-43 5.6E-48 310.4 22.2 248 68-333 2-261 (285)
37 KOG2345 Serine/threonine prote 100.0 2.8E-44 6.1E-49 289.5 14.2 260 65-338 20-301 (302)
38 cd05068 PTKc_Frk_like Catalyti 100.0 4.8E-43 1E-47 304.8 22.7 253 65-336 5-260 (261)
39 cd05113 PTKc_Btk_Bmx Catalytic 100.0 3.4E-43 7.3E-48 304.9 21.5 250 67-335 5-256 (256)
40 cd05072 PTKc_Lyn Catalytic dom 100.0 2.5E-43 5.5E-48 306.5 20.7 252 66-336 6-260 (261)
41 cd05106 PTKc_CSF-1R Catalytic 100.0 2.9E-43 6.4E-48 321.0 22.1 255 66-338 38-373 (374)
42 KOG0663 Protein kinase PITSLRE 100.0 9.1E-44 2E-48 297.9 17.0 262 65-332 75-360 (419)
43 cd05052 PTKc_Abl Catalytic dom 100.0 4.5E-43 9.8E-48 305.3 21.6 253 66-337 6-262 (263)
44 cd05033 PTKc_EphR Catalytic do 100.0 9.8E-43 2.1E-47 303.7 23.7 253 66-337 4-265 (266)
45 KOG0605 NDR and related serine 100.0 1.9E-43 4E-48 313.0 18.9 244 65-326 140-435 (550)
46 cd07871 STKc_PCTAIRE3 Catalyti 100.0 7.4E-43 1.6E-47 307.9 22.3 261 66-332 5-284 (288)
47 cd05059 PTKc_Tec_like Catalyti 100.0 7.4E-43 1.6E-47 302.7 21.8 249 67-334 5-255 (256)
48 PLN00113 leucine-rich repeat r 100.0 5.1E-42 1.1E-46 348.9 31.4 266 63-341 687-955 (968)
49 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.6E-42 3.4E-47 308.1 24.2 263 65-332 4-287 (303)
50 PTZ00263 protein kinase A cata 100.0 3.6E-43 7.8E-48 315.5 20.1 243 66-333 18-271 (329)
51 cd07848 STKc_CDKL5 Catalytic d 100.0 7E-43 1.5E-47 308.0 21.5 262 66-332 1-283 (287)
52 PF07714 Pkinase_Tyr: Protein 100.0 3.4E-43 7.4E-48 305.3 19.0 245 71-334 4-259 (259)
53 KOG4278 Protein tyrosine kinas 100.0 6.2E-44 1.4E-48 320.1 14.6 268 59-344 260-530 (1157)
54 cd05071 PTKc_Src Catalytic dom 100.0 1.5E-42 3.2E-47 301.9 22.8 253 66-338 6-261 (262)
55 cd05048 PTKc_Ror Catalytic Dom 100.0 1.1E-42 2.4E-47 306.0 22.2 252 66-336 5-282 (283)
56 cd05612 STKc_PRKX_like Catalyt 100.0 2.9E-43 6.3E-48 310.9 18.6 243 66-333 1-254 (291)
57 KOG0201 Serine/threonine prote 100.0 7.4E-45 1.6E-49 314.6 8.1 246 67-333 14-263 (467)
58 KOG0658 Glycogen synthase kina 100.0 8.1E-44 1.8E-48 302.5 14.3 257 67-332 25-305 (364)
59 cd05571 STKc_PKB Catalytic dom 100.0 5.4E-43 1.2E-47 313.7 20.1 239 72-332 1-250 (323)
60 cd05108 PTKc_EGFR Catalytic do 100.0 1E-42 2.2E-47 311.1 21.8 257 66-342 7-273 (316)
61 cd05148 PTKc_Srm_Brk Catalytic 100.0 4.2E-43 9E-48 305.1 18.8 252 65-336 5-260 (261)
62 cd06649 PKc_MEK2 Catalytic dom 100.0 3.8E-42 8.3E-47 309.2 25.1 261 65-333 4-301 (331)
63 cd05105 PTKc_PDGFR_alpha Catal 100.0 2.3E-42 5E-47 316.5 23.7 257 65-339 36-399 (400)
64 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 2.8E-42 6E-47 299.8 23.1 251 66-336 6-259 (260)
65 cd05585 STKc_YPK1_like Catalyt 100.0 9.9E-43 2.1E-47 310.5 20.0 235 74-330 1-241 (312)
66 cd05054 PTKc_VEGFR Catalytic d 100.0 2.9E-42 6.4E-47 310.3 22.8 257 66-340 7-336 (337)
67 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.2E-42 2.6E-47 312.9 20.3 250 67-333 2-257 (333)
68 cd05049 PTKc_Trk Catalytic dom 100.0 2.4E-42 5.1E-47 303.4 21.3 252 66-336 5-280 (280)
69 KOG0611 Predicted serine/threo 100.0 1.9E-43 4E-48 303.0 13.5 246 65-334 52-304 (668)
70 KOG0585 Ca2+/calmodulin-depend 100.0 7.6E-43 1.6E-47 304.5 17.3 254 60-333 91-372 (576)
71 cd08228 STKc_Nek6 Catalytic do 100.0 7.8E-42 1.7E-46 298.1 23.8 255 66-337 2-265 (267)
72 cd05595 STKc_PKB_beta Catalyti 100.0 1.9E-42 4.1E-47 310.1 20.3 240 72-333 1-251 (323)
73 KOG0589 Serine/threonine prote 100.0 2.5E-43 5.5E-48 312.2 14.4 248 66-333 4-258 (426)
74 cd05067 PTKc_Lck_Blk Catalytic 100.0 5E-42 1.1E-46 298.2 22.3 252 65-336 5-259 (260)
75 cd05085 PTKc_Fer Catalytic dom 100.0 8.1E-42 1.8E-46 295.1 23.1 244 73-335 2-249 (250)
76 PHA03212 serine/threonine kina 100.0 2.6E-42 5.7E-47 315.9 21.1 259 65-332 91-375 (391)
77 cd05093 PTKc_TrkB Catalytic do 100.0 6.1E-42 1.3E-46 302.2 22.7 257 66-341 5-283 (288)
78 PLN00034 mitogen-activated pro 100.0 2.5E-42 5.5E-47 313.1 20.7 246 66-333 74-328 (353)
79 cd05593 STKc_PKB_gamma Catalyt 100.0 4E-42 8.6E-47 308.6 21.6 240 72-333 1-251 (328)
80 cd05111 PTK_HER3 Pseudokinase 100.0 1.1E-41 2.3E-46 299.2 23.6 256 66-341 7-272 (279)
81 cd05069 PTKc_Yes Catalytic dom 100.0 9.5E-42 2.1E-46 296.5 23.0 251 66-336 6-259 (260)
82 PTZ00426 cAMP-dependent protei 100.0 3.4E-42 7.3E-47 310.1 20.7 243 66-333 30-284 (340)
83 cd05112 PTKc_Itk Catalytic dom 100.0 8.5E-42 1.8E-46 296.0 22.4 250 66-334 4-255 (256)
84 cd05084 PTKc_Fes Catalytic dom 100.0 1.1E-41 2.3E-46 294.7 22.8 245 72-335 1-251 (252)
85 cd05034 PTKc_Src_like Catalyti 100.0 8.9E-42 1.9E-46 296.7 22.3 253 65-336 5-260 (261)
86 cd05094 PTKc_TrkC Catalytic do 100.0 9.6E-42 2.1E-46 301.3 22.7 256 66-340 5-285 (291)
87 cd05115 PTKc_Zap-70 Catalytic 100.0 1.3E-41 2.7E-46 295.2 23.0 245 74-338 3-256 (257)
88 cd05614 STKc_MSK2_N N-terminal 100.0 3E-42 6.5E-47 310.2 19.7 250 67-333 1-267 (332)
89 KOG0594 Protein kinase PCTAIRE 100.0 4E-42 8.6E-47 292.4 19.2 261 67-333 12-302 (323)
90 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.1E-41 2.4E-46 303.2 22.7 261 66-345 18-307 (307)
91 cd06650 PKc_MEK1 Catalytic dom 100.0 1.9E-41 4.1E-46 304.8 24.3 198 65-268 4-205 (333)
92 PTZ00267 NIMA-related protein 100.0 8.7E-42 1.9E-46 320.6 23.0 246 68-332 69-322 (478)
93 cd07862 STKc_CDK6 Catalytic do 100.0 1E-41 2.2E-46 301.0 22.0 259 67-332 2-286 (290)
94 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1E-41 2.2E-46 300.0 21.8 264 69-338 7-282 (283)
95 cd05601 STKc_CRIK Catalytic do 100.0 1.8E-42 3.8E-47 311.4 17.3 250 66-332 1-262 (330)
96 cd05062 PTKc_IGF-1R Catalytic 100.0 6E-42 1.3E-46 300.5 20.1 253 64-335 4-276 (277)
97 cd05082 PTKc_Csk Catalytic dom 100.0 1.1E-41 2.4E-46 295.3 21.5 248 66-337 6-256 (256)
98 cd05584 STKc_p70S6K Catalytic 100.0 1.1E-41 2.5E-46 305.1 22.2 239 72-332 2-255 (323)
99 cd05089 PTKc_Tie1 Catalytic do 100.0 1.9E-41 4.2E-46 300.3 23.0 255 66-341 2-279 (297)
100 cd05596 STKc_ROCK Catalytic do 100.0 7.2E-42 1.6E-46 311.6 20.8 251 65-333 42-304 (370)
101 cd05608 STKc_GRK1 Catalytic do 100.0 1.1E-41 2.4E-46 299.3 21.3 243 74-333 1-257 (280)
102 cd05063 PTKc_EphR_A2 Catalytic 100.0 2.4E-41 5.3E-46 295.1 23.1 253 66-337 5-267 (268)
103 KOG0660 Mitogen-activated prot 100.0 6.7E-43 1.5E-47 296.3 12.7 262 65-333 21-310 (359)
104 cd05573 STKc_ROCK_NDR_like Cat 100.0 2.3E-42 5E-47 313.3 17.2 250 66-333 1-285 (350)
105 cd05053 PTKc_FGFR Catalytic do 100.0 1E-41 2.2E-46 301.5 20.8 255 65-338 11-292 (293)
106 cd08229 STKc_Nek7 Catalytic do 100.0 2.2E-41 4.9E-46 295.2 22.7 256 66-338 2-266 (267)
107 cd05590 STKc_nPKC_eta Catalyti 100.0 1.2E-41 2.7E-46 304.4 21.3 234 72-327 1-241 (320)
108 PTZ00283 serine/threonine prot 100.0 9.3E-42 2E-46 320.7 21.1 255 60-333 26-297 (496)
109 cd05045 PTKc_RET Catalytic dom 100.0 2.8E-41 6E-46 298.2 22.9 254 68-340 2-289 (290)
110 cd05109 PTKc_HER2 Catalytic do 100.0 2.8E-41 6.1E-46 296.6 22.8 255 66-340 7-271 (279)
111 KOG0694 Serine/threonine prote 100.0 7.4E-42 1.6E-46 310.9 19.6 241 64-327 366-613 (694)
112 cd08529 STKc_FA2-like Catalyti 100.0 2.6E-41 5.5E-46 292.9 22.3 247 67-333 1-253 (256)
113 cd05101 PTKc_FGFR2 Catalytic d 100.0 2.2E-41 4.8E-46 300.9 22.4 260 65-343 14-302 (304)
114 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 7.5E-41 1.6E-45 291.8 25.2 256 66-338 2-266 (267)
115 cd05066 PTKc_EphR_A Catalytic 100.0 2.9E-41 6.3E-46 294.6 22.6 253 66-337 4-266 (267)
116 cd05605 STKc_GRK4_like Catalyt 100.0 1.9E-41 4.2E-46 298.5 21.5 248 68-333 2-261 (285)
117 cd05090 PTKc_Ror1 Catalytic do 100.0 2.4E-41 5.3E-46 297.6 22.2 252 66-336 5-282 (283)
118 cd05116 PTKc_Syk Catalytic dom 100.0 2.7E-41 5.8E-46 293.1 22.0 244 73-337 2-255 (257)
119 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.9E-41 4E-46 298.5 21.3 256 68-337 6-283 (284)
120 cd05091 PTKc_Ror2 Catalytic do 100.0 1.4E-41 2.9E-46 299.2 20.3 251 67-336 6-282 (283)
121 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.4E-41 3.1E-46 299.1 20.5 265 67-337 5-283 (284)
122 cd07859 STKc_TDY_MAPK_plant Ca 100.0 3.1E-41 6.7E-46 304.4 23.0 260 67-333 1-290 (338)
123 cd06625 STKc_MEKK3_like Cataly 100.0 4.8E-41 1E-45 292.4 23.4 249 66-333 2-260 (263)
124 KOG1989 ARK protein kinase fam 100.0 9.5E-42 2.1E-46 318.9 20.0 252 67-338 38-312 (738)
125 cd05594 STKc_PKB_alpha Catalyt 100.0 6.9E-42 1.5E-46 306.9 18.5 240 72-333 1-252 (325)
126 KOG0599 Phosphorylase kinase g 100.0 1.8E-42 3.9E-47 282.9 13.2 253 61-332 12-282 (411)
127 cd05088 PTKc_Tie2 Catalytic do 100.0 2.6E-41 5.6E-46 300.2 21.7 256 66-342 7-285 (303)
128 cd05055 PTKc_PDGFR Catalytic d 100.0 4.8E-41 1E-45 298.3 23.4 255 65-337 34-301 (302)
129 cd05073 PTKc_Hck Catalytic dom 100.0 2.7E-41 5.8E-46 293.6 21.3 252 65-336 5-259 (260)
130 cd05591 STKc_nPKC_epsilon Cata 100.0 1.7E-41 3.8E-46 303.7 20.7 240 72-333 1-254 (321)
131 cd05589 STKc_PKN Catalytic dom 100.0 2.9E-41 6.3E-46 302.7 22.1 242 68-332 1-256 (324)
132 cd05592 STKc_nPKC_theta_delta 100.0 3.7E-41 8E-46 300.8 22.7 238 72-331 1-246 (316)
133 cd05587 STKc_cPKC Catalytic do 100.0 3.7E-41 8E-46 302.0 22.5 239 67-327 1-246 (324)
134 cd05620 STKc_nPKC_delta Cataly 100.0 3.1E-41 6.7E-46 301.3 21.9 238 72-331 1-246 (316)
135 cd08219 STKc_Nek3 Catalytic do 100.0 3.5E-41 7.6E-46 292.0 21.5 247 67-333 1-252 (255)
136 cd05626 STKc_LATS2 Catalytic d 100.0 1.5E-41 3.3E-46 310.9 20.3 250 67-333 2-305 (381)
137 cd05619 STKc_nPKC_theta Cataly 100.0 4.1E-41 8.9E-46 300.4 22.5 238 72-331 1-246 (316)
138 cd05628 STKc_NDR1 Catalytic do 100.0 3.9E-41 8.5E-46 306.4 22.7 251 66-333 1-293 (363)
139 cd05607 STKc_GRK7 Catalytic do 100.0 7.9E-41 1.7E-45 293.4 23.9 242 74-332 1-249 (277)
140 cd05588 STKc_aPKC Catalytic do 100.0 2.8E-41 6.1E-46 303.3 21.5 244 72-332 1-261 (329)
141 cd05599 STKc_NDR_like Catalyti 100.0 1.4E-41 3E-46 309.7 19.8 249 66-332 1-295 (364)
142 cd05107 PTKc_PDGFR_beta Cataly 100.0 5.4E-41 1.2E-45 307.4 23.7 256 65-338 36-400 (401)
143 cd05058 PTKc_Met_Ron Catalytic 100.0 8.9E-41 1.9E-45 290.6 23.9 250 72-339 1-261 (262)
144 cd05060 PTKc_Syk_like Catalyti 100.0 7E-41 1.5E-45 290.5 23.1 246 72-338 1-256 (257)
145 cd05056 PTKc_FAK Catalytic dom 100.0 6.3E-41 1.4E-45 292.9 22.8 256 66-341 6-269 (270)
146 cd05092 PTKc_TrkA Catalytic do 100.0 3.6E-41 7.9E-46 296.0 21.2 251 66-335 5-279 (280)
147 cd05618 STKc_aPKC_iota Catalyt 100.0 1.6E-41 3.4E-46 304.8 19.2 239 72-327 1-250 (329)
148 cd05043 PTK_Ryk Pseudokinase d 100.0 6.5E-41 1.4E-45 294.4 22.6 256 65-339 5-278 (280)
149 cd05065 PTKc_EphR_B Catalytic 100.0 4.1E-41 8.9E-46 293.9 21.2 252 67-337 5-268 (269)
150 cd05621 STKc_ROCK2 Catalytic d 100.0 1.9E-41 4E-46 308.6 19.8 252 64-333 41-304 (370)
151 KOG4257 Focal adhesion tyrosin 100.0 5.1E-42 1.1E-46 307.9 15.6 254 69-342 392-654 (974)
152 cd05039 PTKc_Csk_like Catalyti 100.0 6.7E-41 1.4E-45 290.4 22.2 247 66-336 6-255 (256)
153 cd05103 PTKc_VEGFR2 Catalytic 100.0 5.8E-41 1.3E-45 302.9 22.7 258 65-340 6-342 (343)
154 cd05582 STKc_RSK_N N-terminal 100.0 6.6E-42 1.4E-46 306.1 16.3 236 72-329 2-245 (318)
155 cd05570 STKc_PKC Catalytic dom 100.0 4.4E-41 9.6E-46 300.7 21.4 239 72-332 1-251 (318)
156 PTZ00036 glycogen synthase kin 100.0 2.9E-41 6.2E-46 313.7 20.7 259 65-332 65-350 (440)
157 cd00192 PTKc Catalytic domain 100.0 9.5E-41 2.1E-45 289.9 22.7 245 72-335 1-262 (262)
158 cd07872 STKc_PCTAIRE2 Catalyti 100.0 4.4E-41 9.5E-46 299.6 21.0 261 66-332 6-285 (309)
159 cd05061 PTKc_InsR Catalytic do 100.0 6.3E-41 1.4E-45 295.7 21.5 257 64-339 4-280 (288)
160 cd06612 STKc_MST1_2 Catalytic 100.0 7E-41 1.5E-45 290.1 21.4 249 66-332 3-252 (256)
161 cd05035 PTKc_Axl_like Catalyti 100.0 1.1E-40 2.4E-45 291.6 22.8 251 68-337 1-272 (273)
162 cd05075 PTKc_Axl Catalytic dom 100.0 1.1E-40 2.3E-45 291.7 22.6 249 70-337 3-271 (272)
163 cd05575 STKc_SGK Catalytic dom 100.0 3.3E-41 7.1E-46 302.2 19.5 235 72-328 1-242 (323)
164 cd05036 PTKc_ALK_LTK Catalytic 100.0 8.2E-41 1.8E-45 293.3 21.6 252 65-335 5-276 (277)
165 cd05047 PTKc_Tie Catalytic dom 100.0 8.4E-41 1.8E-45 292.1 21.5 245 73-338 2-269 (270)
166 cd05616 STKc_cPKC_beta Catalyt 100.0 5.2E-41 1.1E-45 300.9 20.7 239 67-327 1-246 (323)
167 cd05050 PTKc_Musk Catalytic do 100.0 7.6E-41 1.6E-45 295.2 21.4 253 65-336 4-288 (288)
168 cd06646 STKc_MAP4K5 Catalytic 100.0 9.2E-41 2E-45 291.4 21.5 252 66-334 9-266 (267)
169 cd05598 STKc_LATS Catalytic do 100.0 1.9E-41 4E-46 310.1 17.7 249 67-333 2-301 (376)
170 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.1E-40 2.3E-45 293.4 21.9 257 67-337 5-283 (284)
171 KOG0032 Ca2+/calmodulin-depend 100.0 1.5E-40 3.2E-45 298.4 22.8 250 64-333 33-293 (382)
172 cd05032 PTKc_InsR_like Catalyt 100.0 9.4E-41 2E-45 292.8 21.0 251 66-335 6-276 (277)
173 cd05625 STKc_LATS1 Catalytic d 100.0 3.5E-41 7.5E-46 308.9 18.9 248 67-332 2-304 (382)
174 cd05057 PTKc_EGFR_like Catalyt 100.0 2.4E-40 5.2E-45 290.6 23.5 257 66-342 7-273 (279)
175 cd05083 PTKc_Chk Catalytic dom 100.0 9.2E-41 2E-45 289.2 20.5 246 66-336 6-253 (254)
176 cd05041 PTKc_Fes_like Catalyti 100.0 2.4E-40 5.2E-45 286.1 22.9 245 72-335 1-250 (251)
177 cd05622 STKc_ROCK1 Catalytic d 100.0 8.1E-41 1.8E-45 304.6 20.9 253 63-333 40-304 (371)
178 cd06637 STKc_TNIK Catalytic do 100.0 1.1E-40 2.4E-45 291.6 20.8 250 64-332 4-268 (272)
179 cd08221 STKc_Nek9 Catalytic do 100.0 2.2E-40 4.8E-45 287.1 22.5 247 67-333 1-253 (256)
180 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.7E-40 3.8E-45 296.4 22.4 256 66-340 12-296 (314)
181 cd05097 PTKc_DDR_like Catalyti 100.0 2.6E-40 5.7E-45 292.7 23.2 258 66-335 5-294 (295)
182 cd05632 STKc_GRK5 Catalytic do 100.0 2.4E-40 5.2E-45 291.5 22.8 248 68-333 2-261 (285)
183 cd05597 STKc_DMPK_like Catalyt 100.0 1.4E-40 3.1E-45 298.9 21.8 253 66-333 1-266 (331)
184 KOG0033 Ca2+/calmodulin-depend 100.0 9.2E-43 2E-47 280.4 6.7 249 66-333 11-267 (355)
185 KOG3653 Transforming growth fa 100.0 1.4E-40 3.1E-45 290.2 20.7 258 71-338 215-504 (534)
186 PHA03209 serine/threonine kina 100.0 2.6E-40 5.6E-45 300.2 23.4 191 65-265 65-256 (357)
187 cd07876 STKc_JNK2 Catalytic do 100.0 1.7E-40 3.7E-45 301.9 22.3 260 64-333 19-315 (359)
188 cd07853 STKc_NLK Catalytic dom 100.0 1.2E-40 2.6E-45 304.2 21.3 258 67-333 1-288 (372)
189 cd05110 PTKc_HER4 Catalytic do 100.0 2.1E-40 4.6E-45 294.4 22.3 257 66-342 7-273 (303)
190 cd05051 PTKc_DDR Catalytic dom 100.0 4.2E-40 9.1E-45 291.5 24.0 258 66-335 5-295 (296)
191 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.5E-40 3.2E-45 298.3 21.4 240 72-328 1-249 (327)
192 cd05615 STKc_cPKC_alpha Cataly 100.0 1.3E-40 2.8E-45 298.2 20.8 239 68-328 2-247 (323)
193 PHA03211 serine/threonine kina 100.0 1.2E-40 2.5E-45 308.9 21.1 260 66-333 169-455 (461)
194 cd07868 STKc_CDK8 Catalytic do 100.0 3E-40 6.5E-45 295.4 23.0 194 71-268 6-219 (317)
195 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 3.1E-40 6.7E-45 287.3 22.5 237 72-334 1-261 (262)
196 cd05629 STKc_NDR_like_fungal C 100.0 7.7E-41 1.7E-45 306.1 19.6 250 66-333 1-305 (377)
197 cd05095 PTKc_DDR2 Catalytic do 100.0 3.6E-40 7.8E-45 292.0 23.3 259 66-336 5-296 (296)
198 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2.4E-40 5.2E-45 293.8 22.2 261 66-332 6-285 (301)
199 PF00069 Pkinase: Protein kina 100.0 5.9E-41 1.3E-45 291.2 17.8 250 68-332 1-256 (260)
200 cd06654 STKc_PAK1 Catalytic do 100.0 3.2E-40 6.9E-45 292.3 22.7 248 66-333 20-270 (296)
201 cd06613 STKc_MAP4K3_like Catal 100.0 5.9E-40 1.3E-44 285.3 24.0 251 66-332 3-259 (262)
202 cd05602 STKc_SGK1 Catalytic do 100.0 6.1E-41 1.3E-45 300.7 18.3 238 72-331 1-245 (325)
203 cd06615 PKc_MEK Catalytic doma 100.0 5.5E-40 1.2E-44 292.4 24.2 256 67-333 2-287 (308)
204 cd06619 PKc_MKK5 Catalytic dom 100.0 5E-40 1.1E-44 288.6 23.6 246 67-333 2-253 (279)
205 cd06624 STKc_ASK Catalytic dom 100.0 3E-40 6.6E-45 288.3 22.1 252 64-333 6-265 (268)
206 cd06631 STKc_YSK4 Catalytic do 100.0 4.4E-40 9.5E-45 286.8 23.0 248 67-332 1-261 (265)
207 cd05040 PTKc_Ack_like Catalyti 100.0 4.2E-40 9E-45 285.6 22.7 245 72-335 1-256 (257)
208 cd07839 STKc_CDK5 Catalytic do 100.0 1.4E-40 3E-45 292.8 19.9 261 67-332 1-280 (284)
209 cd07863 STKc_CDK4 Catalytic do 100.0 2.6E-40 5.7E-45 291.7 21.7 259 67-332 1-284 (288)
210 cd05604 STKc_SGK3 Catalytic do 100.0 3.5E-41 7.6E-46 302.3 16.3 237 72-330 1-244 (325)
211 PRK13184 pknD serine/threonine 100.0 3E-40 6.5E-45 319.9 23.7 258 66-340 2-293 (932)
212 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 5.6E-40 1.2E-44 286.8 23.2 248 73-335 2-268 (269)
213 cd06644 STKc_STK10_LOK Catalyt 100.0 7E-40 1.5E-44 289.6 23.9 249 66-332 12-268 (292)
214 cd06605 PKc_MAPKK Catalytic do 100.0 2.4E-40 5.1E-45 288.3 20.6 250 67-332 2-256 (265)
215 smart00219 TyrKc Tyrosine kina 100.0 5E-40 1.1E-44 285.0 22.4 246 70-334 3-258 (258)
216 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 4.5E-40 9.8E-45 288.1 22.3 237 73-335 2-274 (274)
217 cd07874 STKc_JNK3 Catalytic do 100.0 1.7E-40 3.7E-45 301.5 20.3 260 64-333 15-311 (355)
218 cd07861 STKc_CDK1_euk Catalyti 100.0 4.3E-40 9.2E-45 289.9 22.2 259 67-332 1-281 (285)
219 cd06643 STKc_SLK Catalytic dom 100.0 3.7E-40 8.1E-45 289.9 21.7 248 68-333 7-262 (282)
220 cd05624 STKc_MRCK_beta Catalyt 100.0 1.4E-40 2.9E-45 299.1 19.2 253 66-333 1-266 (331)
221 cd05603 STKc_SGK2 Catalytic do 100.0 1.6E-40 3.5E-45 297.5 19.5 235 72-328 1-242 (321)
222 cd05100 PTKc_FGFR3 Catalytic d 100.0 3.6E-40 7.9E-45 296.9 21.8 257 66-341 12-297 (334)
223 cd08223 STKc_Nek4 Catalytic do 100.0 5.9E-40 1.3E-44 284.6 22.2 247 67-333 1-254 (257)
224 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 5.6E-40 1.2E-44 284.9 22.0 237 72-335 1-259 (259)
225 cd05630 STKc_GRK6 Catalytic do 100.0 3.1E-40 6.7E-45 290.8 20.6 245 68-332 2-260 (285)
226 cd05623 STKc_MRCK_alpha Cataly 100.0 2.4E-40 5.3E-45 297.6 20.3 253 66-333 1-266 (332)
227 cd08218 STKc_Nek1 Catalytic do 100.0 4.2E-40 9.1E-45 285.4 20.7 247 67-333 1-253 (256)
228 cd05044 PTKc_c-ros Catalytic d 100.0 4.1E-40 8.8E-45 287.6 20.7 245 73-336 2-269 (269)
229 cd05046 PTK_CCK4 Pseudokinase 100.0 5.8E-40 1.3E-44 287.6 21.7 252 66-335 5-274 (275)
230 cd06611 STKc_SLK_like Catalyti 100.0 3.6E-40 7.8E-45 289.6 20.4 251 65-333 4-262 (280)
231 cd07875 STKc_JNK1 Catalytic do 100.0 2.8E-40 6E-45 301.1 20.0 260 64-333 22-318 (364)
232 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.1E-39 2.4E-44 284.5 22.9 245 68-332 2-263 (267)
233 cd06609 STKc_MST3_like Catalyt 100.0 7.4E-40 1.6E-44 286.8 21.8 245 67-332 2-250 (274)
234 cd05042 PTKc_Aatyk Catalytic d 100.0 1.1E-39 2.5E-44 284.8 22.9 248 73-335 2-268 (269)
235 KOG2052 Activin A type IB rece 100.0 8.9E-40 1.9E-44 283.3 21.8 267 64-339 209-505 (513)
236 cd06645 STKc_MAP4K3 Catalytic 100.0 7.3E-40 1.6E-44 285.7 21.6 250 66-332 9-264 (267)
237 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.7E-40 3.6E-45 288.3 17.1 239 72-335 1-258 (258)
238 KOG0574 STE20-like serine/thre 100.0 7.9E-42 1.7E-46 282.8 8.3 259 68-345 35-306 (502)
239 cd06655 STKc_PAK2 Catalytic do 100.0 1.1E-39 2.4E-44 288.8 22.4 247 66-332 19-268 (296)
240 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.3E-39 2.9E-44 286.9 22.8 249 67-333 2-262 (286)
241 PHA03207 serine/threonine kina 100.0 9.3E-40 2E-44 300.1 22.3 261 65-333 91-375 (392)
242 cd06642 STKc_STK25-YSK1 Cataly 100.0 4.5E-40 9.7E-45 288.6 19.4 243 68-332 6-252 (277)
243 cd08528 STKc_Nek10 Catalytic d 100.0 1.2E-39 2.7E-44 284.5 22.1 250 68-336 2-269 (269)
244 KOG0667 Dual-specificity tyros 100.0 2.8E-40 6E-45 300.2 18.4 259 66-333 186-502 (586)
245 cd07867 STKc_CDC2L6 Catalytic 100.0 2.4E-39 5.2E-44 289.5 24.4 193 71-267 6-218 (317)
246 cd06632 STKc_MEKK1_plant Catal 100.0 1.7E-39 3.7E-44 281.7 22.7 245 67-332 1-254 (258)
247 KOG0610 Putative serine/threon 100.0 4E-40 8.7E-45 283.3 18.4 248 67-332 78-391 (459)
248 cd05627 STKc_NDR2 Catalytic do 100.0 3.1E-40 6.7E-45 300.2 18.9 248 67-332 2-292 (360)
249 cd06640 STKc_MST4 Catalytic do 100.0 2.6E-39 5.7E-44 283.7 24.0 245 67-333 5-253 (277)
250 cd08227 PK_STRAD_alpha Pseudok 100.0 1.7E-39 3.8E-44 291.6 23.0 259 71-332 3-306 (327)
251 KOG0577 Serine/threonine prote 100.0 2.5E-41 5.4E-46 301.8 10.7 242 68-333 28-278 (948)
252 cd06656 STKc_PAK3 Catalytic do 100.0 8E-40 1.7E-44 289.9 20.2 248 65-332 18-268 (297)
253 cd07844 STKc_PCTAIRE_like Cata 100.0 1.7E-39 3.6E-44 287.0 22.0 262 66-332 5-287 (291)
254 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.6E-39 3.5E-44 286.1 21.8 252 66-333 5-266 (284)
255 cd07878 STKc_p38beta_MAPK11 Ca 100.0 6.1E-40 1.3E-44 296.5 19.2 259 63-333 12-298 (343)
256 cd08220 STKc_Nek8 Catalytic do 100.0 1.7E-39 3.7E-44 281.4 21.2 245 67-332 1-252 (256)
257 cd07847 STKc_CDKL1_4 Catalytic 100.0 8.6E-39 1.9E-43 281.6 25.8 261 66-332 1-282 (286)
258 cd06639 STKc_myosinIIIB Cataly 100.0 2E-39 4.3E-44 286.5 21.8 259 57-333 13-287 (291)
259 cd06623 PKc_MAPKK_plant_like C 100.0 4.4E-39 9.6E-44 280.0 23.6 249 67-333 2-256 (264)
260 cd05086 PTKc_Aatyk2 Catalytic 100.0 8.3E-39 1.8E-43 279.2 25.3 248 73-335 2-267 (268)
261 cd07870 STKc_PFTAIRE2 Catalyti 100.0 6.7E-39 1.5E-43 283.2 24.9 263 65-332 4-287 (291)
262 KOG4717 Serine/threonine prote 100.0 3.6E-40 7.9E-45 290.3 16.5 244 67-332 19-269 (864)
263 cd07832 STKc_CCRK Catalytic do 100.0 2.3E-39 5E-44 285.3 21.7 262 67-333 1-282 (286)
264 cd06651 STKc_MEKK3 Catalytic d 100.0 3.9E-39 8.5E-44 281.0 22.8 247 66-332 2-260 (266)
265 cd06638 STKc_myosinIIIA Cataly 100.0 1.1E-39 2.5E-44 287.3 19.5 257 59-333 11-283 (286)
266 cd07833 STKc_CDKL Catalytic do 100.0 2.9E-39 6.3E-44 284.9 22.1 261 67-332 2-284 (288)
267 PTZ00266 NIMA-related protein 100.0 1.5E-39 3.3E-44 316.3 22.0 251 64-332 11-294 (1021)
268 cd06636 STKc_MAP4K4_6 Catalyti 100.0 2E-39 4.2E-44 285.3 20.7 257 57-332 7-278 (282)
269 cd06610 STKc_OSR1_SPAK Catalyt 100.0 4.3E-39 9.4E-44 280.6 22.6 252 66-332 1-263 (267)
270 cd07841 STKc_CDK7 Catalytic do 100.0 4.8E-39 1E-43 285.0 22.9 261 67-333 1-282 (298)
271 cd08217 STKc_Nek2 Catalytic do 100.0 4.6E-39 1E-43 279.9 22.3 250 67-333 1-262 (265)
272 cd05586 STKc_Sck1_like Catalyt 100.0 3.1E-40 6.7E-45 296.8 15.3 238 74-332 1-252 (330)
273 cd07846 STKc_CDKL2_3 Catalytic 100.0 1E-39 2.2E-44 287.6 18.3 261 66-332 1-282 (286)
274 cd06630 STKc_MEKK1 Catalytic d 100.0 4.7E-39 1E-43 280.6 22.2 250 67-332 1-263 (268)
275 PTZ00284 protein kinase; Provi 100.0 3.2E-39 6.9E-44 303.0 22.3 263 60-332 123-437 (467)
276 cd06608 STKc_myosinIII_like Ca 100.0 3.3E-39 7.2E-44 282.4 20.8 251 64-332 4-271 (275)
277 cd06629 STKc_MAPKKK_Bck1_like 100.0 7.1E-39 1.5E-43 280.2 22.8 252 67-333 2-269 (272)
278 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1E-38 2.2E-43 281.5 23.9 255 67-332 2-265 (287)
279 cd06626 STKc_MEKK4 Catalytic d 100.0 9.9E-39 2.1E-43 277.9 23.4 249 67-332 1-260 (264)
280 cd06614 STKc_PAK Catalytic dom 100.0 8.8E-39 1.9E-43 281.7 23.3 251 64-332 17-269 (286)
281 cd06641 STKc_MST3 Catalytic do 100.0 1.3E-38 2.9E-43 279.3 24.1 244 68-333 6-253 (277)
282 cd05574 STKc_phototropin_like 100.0 5.9E-39 1.3E-43 286.8 22.2 248 67-332 2-288 (316)
283 cd06607 STKc_TAO Catalytic dom 100.0 1.3E-38 2.8E-43 283.5 24.2 244 66-333 15-267 (307)
284 KOG0199 ACK and related non-re 100.0 1.2E-39 2.7E-44 295.8 17.7 243 72-334 116-369 (1039)
285 cd05580 STKc_PKA Catalytic dom 100.0 7.2E-39 1.6E-43 282.9 22.3 242 66-332 1-253 (290)
286 cd05122 PKc_STE Catalytic doma 100.0 1.5E-38 3.3E-43 274.4 23.8 246 68-332 2-250 (253)
287 cd06617 PKc_MKK3_6 Catalytic d 100.0 7.3E-39 1.6E-43 281.7 21.7 247 66-332 1-260 (283)
288 cd08225 STKc_Nek5 Catalytic do 100.0 4.1E-39 8.8E-44 279.2 19.6 247 67-333 1-254 (257)
289 cd07843 STKc_CDC2L1 Catalytic 100.0 9.8E-39 2.1E-43 282.4 22.2 261 66-332 5-289 (293)
290 cd05609 STKc_MAST Catalytic do 100.0 7E-39 1.5E-43 284.9 21.2 253 66-336 1-273 (305)
291 cd06917 STKc_NAK1_like Catalyt 100.0 1.1E-38 2.4E-43 279.8 22.0 244 68-332 3-254 (277)
292 cd05074 PTKc_Tyro3 Catalytic d 100.0 1E-38 2.2E-43 279.3 21.7 251 68-337 1-272 (273)
293 KOG4250 TANK binding protein k 100.0 1.1E-39 2.4E-44 297.6 15.3 269 71-344 18-317 (732)
294 cd07860 STKc_CDK2_3 Catalytic 100.0 7.3E-39 1.6E-43 281.9 20.1 259 67-332 1-280 (284)
295 cd06658 STKc_PAK5 Catalytic do 100.0 5.9E-39 1.3E-43 283.5 19.4 243 71-333 27-272 (292)
296 cd07864 STKc_CDK12 Catalytic d 100.0 1.7E-38 3.7E-43 282.0 22.5 264 63-332 4-298 (302)
297 cd06635 STKc_TAO1 Catalytic do 100.0 4E-38 8.7E-43 281.5 24.9 243 68-334 27-278 (317)
298 cd06652 STKc_MEKK2 Catalytic d 100.0 3.7E-38 8E-43 274.6 24.0 247 66-332 2-260 (265)
299 cd06648 STKc_PAK_II Catalytic 100.0 1.8E-38 3.9E-43 279.6 22.2 245 68-332 21-268 (285)
300 cd07845 STKc_CDK10 Catalytic d 100.0 1.9E-38 4.1E-43 282.7 22.4 263 65-333 6-290 (309)
301 cd06606 STKc_MAPKKK Catalytic 100.0 4.9E-38 1.1E-42 272.3 24.1 247 68-332 2-256 (260)
302 cd06659 STKc_PAK6 Catalytic do 100.0 1.5E-38 3.2E-43 281.7 21.2 243 71-333 26-271 (297)
303 cd07837 STKc_CdkB_plant Cataly 100.0 2.1E-38 4.5E-43 280.5 22.1 261 66-332 1-290 (295)
304 KOG0579 Ste20-like serine/thre 100.0 5.5E-40 1.2E-44 295.4 12.0 244 72-333 38-289 (1187)
305 KOG0983 Mitogen-activated prot 100.0 7.9E-40 1.7E-44 267.4 11.9 244 72-333 98-349 (391)
306 cd07840 STKc_CDK9_like Catalyt 100.0 2.6E-38 5.6E-43 278.6 22.3 260 68-332 1-283 (287)
307 cd05578 STKc_Yank1 Catalytic d 100.0 7.1E-39 1.5E-43 278.0 17.9 245 67-331 1-253 (258)
308 KOG1025 Epidermal growth facto 100.0 2.5E-39 5.3E-44 298.4 15.4 251 71-341 701-961 (1177)
309 PHA03390 pk1 serine/threonine- 100.0 7.4E-38 1.6E-42 273.0 24.0 246 62-332 10-261 (267)
310 cd08215 STKc_Nek Catalytic dom 100.0 3E-38 6.4E-43 273.6 21.3 246 67-332 1-254 (258)
311 cd06616 PKc_MKK4 Catalytic dom 100.0 1.5E-38 3.2E-43 280.5 19.7 250 68-333 6-267 (288)
312 cd07831 STKc_MOK Catalytic dom 100.0 3.8E-38 8.3E-43 276.9 22.1 257 68-332 1-278 (282)
313 cd05118 STKc_CMGC Catalytic do 100.0 3E-38 6.4E-43 277.7 21.3 259 68-332 1-279 (283)
314 cd07835 STKc_CDK1_like Catalyt 100.0 2.6E-38 5.7E-43 278.2 20.9 258 68-332 1-279 (283)
315 KOG4279 Serine/threonine prote 100.0 1.7E-39 3.7E-44 294.8 13.3 242 73-332 582-831 (1226)
316 cd06647 STKc_PAK_I Catalytic d 100.0 2.1E-38 4.6E-43 280.2 20.1 248 66-333 19-269 (293)
317 KOG0596 Dual specificity; seri 100.0 7.6E-39 1.6E-43 284.1 17.1 249 66-332 361-626 (677)
318 cd07850 STKc_JNK Catalytic dom 100.0 5.3E-38 1.2E-42 284.9 23.0 260 64-333 14-311 (353)
319 cd05577 STKc_GRK Catalytic dom 100.0 3.8E-38 8.2E-43 276.4 21.2 241 74-332 1-253 (277)
320 cd07836 STKc_Pho85 Catalytic d 100.0 5.4E-38 1.2E-42 276.3 22.1 260 67-332 1-280 (284)
321 cd06618 PKc_MKK7 Catalytic dom 100.0 4.1E-38 8.9E-43 278.8 21.1 251 65-333 14-273 (296)
322 cd05572 STKc_cGK_PKG Catalytic 100.0 6.3E-38 1.4E-42 272.7 21.8 240 74-332 1-251 (262)
323 cd07865 STKc_CDK9 Catalytic do 100.0 6.5E-38 1.4E-42 279.2 21.0 260 65-332 11-306 (310)
324 cd07842 STKc_CDK8_like Catalyt 100.0 1.3E-37 2.7E-42 278.2 22.9 262 67-332 1-312 (316)
325 cd08530 STKc_CNK2-like Catalyt 100.0 6.3E-38 1.4E-42 271.5 20.3 244 67-332 1-252 (256)
326 PLN00009 cyclin-dependent kina 100.0 1.1E-37 2.4E-42 275.8 22.0 261 66-332 2-283 (294)
327 cd07849 STKc_ERK1_2_like Catal 100.0 2.6E-38 5.6E-43 285.1 18.2 262 65-333 4-292 (336)
328 KOG0986 G protein-coupled rece 100.0 4.2E-39 9.2E-44 279.6 12.3 245 66-328 185-436 (591)
329 cd06627 STKc_Cdc7_like Catalyt 100.0 3.2E-37 7E-42 266.7 24.2 245 67-332 1-250 (254)
330 PHA03210 serine/threonine kina 100.0 4E-38 8.6E-43 296.9 20.0 266 64-333 146-454 (501)
331 cd05613 STKc_MSK1_N N-terminal 100.0 1.3E-37 2.8E-42 274.9 21.9 248 68-332 2-267 (290)
332 KOG0200 Fibroblast/platelet-de 100.0 7.8E-38 1.7E-42 299.5 22.1 255 69-340 299-582 (609)
333 cd05633 STKc_GRK3 Catalytic do 100.0 1E-37 2.2E-42 273.9 21.0 240 73-333 1-255 (279)
334 cd06653 STKc_MEKK3_like_1 Cata 100.0 2E-37 4.3E-42 269.9 22.6 248 66-333 2-261 (264)
335 cd05583 STKc_MSK_N N-terminal 100.0 7.3E-38 1.6E-42 276.1 20.1 253 68-337 2-267 (288)
336 cd06633 STKc_TAO3 Catalytic do 100.0 3.1E-37 6.7E-42 275.3 24.2 242 68-333 23-273 (313)
337 cd05579 STKc_MAST_like Catalyt 100.0 5.9E-38 1.3E-42 272.9 19.0 243 74-335 1-256 (265)
338 cd05611 STKc_Rim15_like Cataly 100.0 1.5E-37 3.2E-42 270.1 21.4 242 72-335 2-250 (260)
339 PHA02882 putative serine/threo 100.0 1.4E-37 3E-42 275.1 21.6 251 66-334 12-293 (294)
340 cd06634 STKc_TAO2 Catalytic do 100.0 2.3E-37 5E-42 275.5 22.9 243 67-333 16-267 (308)
341 cd07852 STKc_MAPK15 Catalytic 100.0 9.3E-38 2E-42 281.6 19.6 262 64-333 5-295 (337)
342 cd07858 STKc_TEY_MAPK_plant Ca 100.0 7.9E-38 1.7E-42 282.0 18.8 265 65-337 4-297 (337)
343 KOG1035 eIF-2alpha kinase GCN2 100.0 2.4E-38 5.3E-43 302.9 16.2 253 62-332 475-870 (1351)
344 cd06657 STKc_PAK4 Catalytic do 100.0 3.4E-37 7.3E-42 272.3 22.4 241 72-332 26-269 (292)
345 cd07855 STKc_ERK5 Catalytic do 100.0 7.1E-38 1.5E-42 282.0 18.4 262 65-332 4-293 (334)
346 cd07834 STKc_MAPK Catalytic do 100.0 9.7E-38 2.1E-42 280.7 19.2 265 67-337 1-295 (330)
347 cd07838 STKc_CDK4_6_like Catal 100.0 5E-37 1.1E-41 270.4 23.4 257 68-332 1-283 (287)
348 cd08226 PK_STRAD_beta Pseudoki 100.0 4.5E-37 9.8E-42 276.1 22.7 257 73-332 5-307 (328)
349 KOG0604 MAP kinase-activated p 100.0 1.4E-38 3.1E-43 263.0 11.8 252 64-332 59-321 (400)
350 cd07866 STKc_BUR1 Catalytic do 100.0 2.1E-37 4.5E-42 276.1 19.5 263 65-332 7-307 (311)
351 cd05581 STKc_PDK1 Catalytic do 100.0 1.3E-37 2.8E-42 273.1 17.9 246 66-332 1-276 (280)
352 cd07830 STKc_MAK_like Catalyti 100.0 2.8E-37 6.1E-42 271.6 19.9 257 68-332 1-279 (283)
353 cd08222 STKc_Nek11 Catalytic d 100.0 3.4E-37 7.4E-42 267.8 19.8 245 67-332 1-256 (260)
354 PTZ00024 cyclin-dependent prot 100.0 7.3E-37 1.6E-41 275.6 22.3 260 66-332 8-312 (335)
355 cd08216 PK_STRAD Pseudokinase 100.0 1.2E-36 2.6E-41 271.7 22.7 255 74-333 10-295 (314)
356 KOG0662 Cyclin-dependent kinas 100.0 1.3E-37 2.9E-42 239.8 13.9 260 68-332 4-282 (292)
357 cd05606 STKc_beta_ARK Catalyti 100.0 1.2E-36 2.7E-41 266.9 22.2 239 73-332 1-254 (278)
358 cd07879 STKc_p38delta_MAPK13 C 100.0 1.1E-36 2.4E-41 275.0 22.1 260 65-337 14-303 (342)
359 cd07877 STKc_p38alpha_MAPK14 C 100.0 4.8E-37 1E-41 277.6 19.0 265 57-333 8-300 (345)
360 KOG1006 Mitogen-activated prot 100.0 3.3E-39 7.3E-44 262.7 4.2 260 52-333 57-327 (361)
361 cd07829 STKc_CDK_like Catalyti 100.0 1.3E-36 2.9E-41 267.0 20.9 258 68-332 1-278 (282)
362 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 2.4E-36 5.3E-41 271.1 22.5 259 64-333 8-288 (328)
363 cd05123 STKc_AGC Catalytic dom 100.0 2.1E-36 4.5E-41 261.2 20.6 234 74-329 1-240 (250)
364 KOG0612 Rho-associated, coiled 100.0 9.8E-38 2.1E-42 296.7 13.2 252 63-332 72-337 (1317)
365 KOG0586 Serine/threonine prote 100.0 3.5E-37 7.5E-42 277.5 15.9 245 65-332 55-305 (596)
366 cd07880 STKc_p38gamma_MAPK12 C 100.0 7.8E-37 1.7E-41 276.0 18.0 260 61-332 10-297 (343)
367 KOG0690 Serine/threonine prote 100.0 8.7E-38 1.9E-42 261.3 9.9 239 65-325 167-411 (516)
368 KOG0584 Serine/threonine prote 100.0 1.9E-37 4.1E-42 279.6 12.9 241 71-332 45-295 (632)
369 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.1E-36 2.4E-41 275.0 18.0 260 66-332 5-299 (342)
370 KOG4645 MAPKKK (MAP kinase kin 100.0 1.8E-38 3.9E-43 305.3 6.5 251 64-333 1233-1494(1509)
371 KOG0607 MAP kinase-interacting 100.0 6.6E-37 1.4E-41 255.4 14.8 249 72-332 84-360 (463)
372 cd07851 STKc_p38 Catalytic dom 100.0 9.2E-37 2E-41 275.6 16.4 257 64-332 13-297 (343)
373 KOG0603 Ribosomal protein S6 k 100.0 9.4E-37 2E-41 276.1 15.9 239 65-332 321-562 (612)
374 cd07857 STKc_MPK1 Catalytic do 100.0 5.3E-36 1.2E-40 269.6 19.8 259 67-332 1-291 (332)
375 KOG1024 Receptor-like protein 100.0 4.4E-36 9.6E-41 256.5 17.5 255 65-338 283-556 (563)
376 KOG0666 Cyclin C-dependent kin 100.0 7.4E-37 1.6E-41 254.2 12.3 264 65-333 23-337 (438)
377 cd05576 STKc_RPK118_like Catal 100.0 1.6E-35 3.4E-40 253.8 17.5 220 77-328 4-224 (237)
378 cd05610 STKc_MASTL Catalytic d 100.0 4.7E-35 1E-39 284.3 21.7 143 66-212 4-152 (669)
379 KOG1151 Tousled-like protein k 100.0 2E-36 4.3E-41 262.6 10.1 252 68-332 465-740 (775)
380 smart00220 S_TKc Serine/Threon 100.0 1.3E-34 2.8E-39 248.2 21.2 236 78-332 1-240 (244)
381 KOG0696 Serine/threonine prote 100.0 3.3E-35 7.2E-40 252.9 15.2 239 66-326 349-594 (683)
382 KOG4236 Serine/threonine prote 100.0 4.9E-36 1.1E-40 264.9 9.2 241 70-331 568-817 (888)
383 KOG0984 Mitogen-activated prot 100.0 2.1E-35 4.6E-40 232.2 11.8 210 67-281 47-268 (282)
384 KOG0669 Cyclin T-dependent kin 100.0 7.4E-37 1.6E-41 247.4 3.2 261 68-333 19-315 (376)
385 KOG0671 LAMMER dual specificit 100.0 1.1E-35 2.3E-40 253.6 10.2 261 64-333 87-406 (415)
386 PLN03225 Serine/threonine-prot 100.0 7.9E-35 1.7E-39 276.3 16.9 262 64-333 130-450 (566)
387 KOG0587 Traf2- and Nck-interac 100.0 2.4E-34 5.1E-39 267.8 18.7 251 65-333 18-282 (953)
388 PLN03224 probable serine/threo 100.0 5E-33 1.1E-37 257.9 20.8 256 65-333 144-500 (507)
389 KOG0614 cGMP-dependent protein 100.0 3.2E-35 6.8E-40 258.7 5.3 239 67-326 421-665 (732)
390 KOG1027 Serine/threonine prote 100.0 1.2E-34 2.6E-39 268.6 8.1 242 69-332 512-766 (903)
391 KOG0608 Warts/lats-like serine 100.0 3.3E-33 7.1E-38 251.8 13.6 233 68-313 631-910 (1034)
392 KOG0695 Serine/threonine prote 100.0 3.1E-33 6.6E-38 235.2 11.6 242 65-326 249-503 (593)
393 cd00180 PKc Catalytic domain o 100.0 1.6E-31 3.5E-36 223.7 21.3 208 74-333 1-214 (215)
394 KOG0664 Nemo-like MAPK-related 100.0 1.9E-34 4.1E-39 236.1 2.5 258 68-333 55-343 (449)
395 KOG0668 Casein kinase II, alph 100.0 5.7E-33 1.2E-37 221.9 10.8 258 65-332 37-321 (338)
396 KOG1290 Serine/threonine prote 100.0 3.2E-31 7E-36 232.5 16.8 260 66-332 78-549 (590)
397 KOG1152 Signal transduction se 100.0 2.8E-32 6E-37 243.5 9.7 195 65-266 560-770 (772)
398 KOG0665 Jun-N-terminal kinase 100.0 1.8E-31 4E-36 222.9 10.3 258 66-333 17-310 (369)
399 smart00221 STYKc Protein kinas 100.0 6.7E-30 1.4E-34 216.6 20.1 197 68-267 1-202 (225)
400 KOG0576 Mitogen-activated prot 100.0 6.6E-32 1.4E-36 244.7 6.7 251 65-332 14-270 (829)
401 KOG1345 Serine/threonine kinas 100.0 4.8E-30 1E-34 210.0 12.4 260 65-342 23-293 (378)
402 KOG0670 U4/U6-associated splic 100.0 5.2E-31 1.1E-35 232.8 5.5 197 64-267 430-637 (752)
403 smart00750 KIND kinase non-cat 100.0 5.7E-29 1.2E-33 203.2 17.2 172 145-342 1-174 (176)
404 KOG1167 Serine/threonine prote 100.0 2.8E-29 6.1E-34 217.2 11.0 266 61-333 31-381 (418)
405 PLN00181 protein SPA1-RELATED; 100.0 2E-29 4.4E-34 250.5 10.7 195 116-332 28-264 (793)
406 KOG1165 Casein kinase (serine/ 99.9 3.6E-25 7.9E-30 186.3 17.0 262 66-340 28-302 (449)
407 PRK09188 serine/threonine prot 99.9 1.5E-25 3.2E-30 199.9 15.1 162 64-239 16-194 (365)
408 KOG1164 Casein kinase (serine/ 99.9 6.6E-24 1.4E-28 189.5 21.5 257 67-341 19-301 (322)
409 KOG0195 Integrin-linked kinase 99.9 5.7E-26 1.2E-30 186.4 7.3 243 71-338 195-447 (448)
410 KOG1163 Casein kinase (serine/ 99.9 3.7E-24 8E-29 172.8 13.0 261 65-340 14-287 (341)
411 COG0515 SPS1 Serine/threonine 99.9 1.2E-22 2.7E-27 181.7 23.5 255 68-333 2-275 (384)
412 KOG0590 Checkpoint kinase and 99.9 1.2E-24 2.7E-29 206.3 6.8 250 70-332 322-584 (601)
413 PRK10359 lipopolysaccharide co 99.9 2.2E-23 4.7E-28 173.3 9.4 169 64-259 29-216 (232)
414 cd05147 RIO1_euk RIO kinase fa 99.9 8.9E-23 1.9E-27 167.7 12.2 136 72-214 3-167 (190)
415 cd05145 RIO1_like RIO kinase f 99.9 7.6E-22 1.7E-26 162.8 14.4 138 71-215 2-168 (190)
416 KOG1023 Natriuretic peptide re 99.9 4.2E-22 9E-27 181.1 12.5 219 114-341 1-228 (484)
417 KOG1166 Mitotic checkpoint ser 99.9 1.7E-21 3.7E-26 188.9 15.7 252 64-342 696-958 (974)
418 KOG1240 Protein kinase contain 99.9 1E-22 2.2E-27 194.7 4.8 245 67-334 24-292 (1431)
419 PRK12274 serine/threonine prot 99.9 6.8E-21 1.5E-25 155.1 13.8 182 70-267 6-209 (218)
420 PF14531 Kinase-like: Kinase-l 99.9 3.7E-21 8.1E-26 164.7 11.6 227 69-324 15-288 (288)
421 KOG0603 Ribosomal protein S6 k 99.9 2.8E-22 6.1E-27 182.5 4.5 229 74-334 2-241 (612)
422 PRK10345 hypothetical protein; 99.8 1.7E-19 3.7E-24 149.6 13.9 134 69-211 5-156 (210)
423 KOG4158 BRPK/PTEN-induced prot 99.8 1.2E-19 2.5E-24 156.8 11.8 197 118-335 274-512 (598)
424 smart00090 RIO RIO-like kinase 99.8 2.8E-19 6.1E-24 151.9 12.2 139 67-214 29-198 (237)
425 PRK14879 serine/threonine prot 99.8 6.9E-19 1.5E-23 147.9 13.4 132 72-213 2-143 (211)
426 cd05144 RIO2_C RIO kinase fami 99.8 1.6E-18 3.5E-23 144.1 12.8 135 67-215 16-176 (198)
427 KOG1033 eIF-2alpha kinase PEK/ 99.8 7.8E-20 1.7E-24 163.5 4.7 172 134-330 330-509 (516)
428 TIGR03724 arch_bud32 Kae1-asso 99.8 2.2E-18 4.7E-23 143.5 12.0 128 73-213 1-138 (199)
429 PRK09605 bifunctional UGMP fam 99.8 5.9E-18 1.3E-22 161.2 14.0 134 66-213 333-476 (535)
430 KOG0606 Microtubule-associated 99.7 5.6E-18 1.2E-22 162.3 7.9 210 66-328 83-307 (1205)
431 cd05120 APH_ChoK_like Aminogly 99.7 1.5E-16 3.1E-21 126.2 12.1 134 71-213 3-138 (155)
432 cd05119 RIO RIO kinase family, 99.7 1.7E-16 3.7E-21 130.7 11.7 135 71-215 2-165 (187)
433 TIGR01982 UbiB 2-polyprenylphe 99.7 7.7E-15 1.7E-19 135.6 21.8 139 71-215 122-308 (437)
434 PRK01723 3-deoxy-D-manno-octul 99.7 7.3E-16 1.6E-20 131.2 13.9 133 71-213 36-191 (239)
435 KOG0590 Checkpoint kinase and 99.7 9.6E-18 2.1E-22 159.5 1.4 250 68-331 22-284 (601)
436 PRK04750 ubiB putative ubiquin 99.6 9.8E-14 2.1E-18 129.8 18.1 140 65-215 119-315 (537)
437 KOG1266 Protein kinase [Signal 99.6 1.5E-14 3.3E-19 122.6 8.8 201 112-333 119-331 (458)
438 KOG0601 Cyclin-dependent kinas 99.5 7.8E-14 1.7E-18 127.5 9.0 243 68-332 116-378 (524)
439 cd05151 ChoK Choline Kinase (C 99.5 2.4E-13 5.1E-18 110.1 10.2 126 72-213 4-136 (170)
440 KOG1243 Protein kinase [Genera 99.5 1.6E-12 3.6E-17 120.3 15.1 164 87-261 34-199 (690)
441 KOG3087 Serine/threonine prote 99.4 5.3E-12 1.2E-16 99.2 11.4 140 70-213 11-165 (229)
442 COG4248 Uncharacterized protei 99.3 1.5E-10 3.3E-15 102.0 18.4 259 71-337 16-300 (637)
443 cd05154 ACAD10_11_like Acyl-Co 99.3 1.7E-11 3.7E-16 103.6 12.2 140 72-213 4-206 (223)
444 cd05146 RIO3_euk RIO kinase fa 99.3 5E-11 1.1E-15 97.3 13.3 135 72-215 3-175 (197)
445 COG3642 Mn2+-dependent serine/ 99.3 3.9E-11 8.4E-16 94.8 10.8 128 73-213 3-140 (204)
446 COG0661 AarF Predicted unusual 99.2 5.5E-10 1.2E-14 104.1 18.4 139 71-215 130-316 (517)
447 KOG0601 Cyclin-dependent kinas 99.2 4.2E-12 9E-17 116.4 2.9 245 63-335 262-516 (524)
448 KOG3741 Poly(A) ribonuclease s 99.2 1.6E-09 3.4E-14 98.0 18.3 212 78-334 288-522 (655)
449 PRK15123 lipopolysaccharide co 99.1 2E-09 4.3E-14 92.9 14.4 138 72-213 28-194 (268)
450 KOG0606 Microtubule-associated 99.1 4.4E-11 9.5E-16 115.8 3.0 244 67-328 805-1084(1205)
451 PF01163 RIO1: RIO1 family; I 99.1 1.5E-09 3.2E-14 88.4 10.8 123 81-214 1-156 (188)
452 KOG1235 Predicted unusual prot 99.0 3.7E-09 8E-14 98.3 12.3 141 70-215 165-356 (538)
453 COG0478 RIO-like serine/threon 99.0 5.4E-09 1.2E-13 87.7 10.0 131 70-213 95-251 (304)
454 PRK09902 hypothetical protein; 98.9 2.6E-08 5.7E-13 81.6 13.3 135 74-213 26-179 (216)
455 KOG2137 Protein kinase [Signal 98.9 7.6E-10 1.6E-14 103.3 4.0 151 167-331 105-263 (700)
456 PF06293 Kdo: Lipopolysacchari 98.8 5.1E-08 1.1E-12 81.3 12.0 107 104-214 55-171 (206)
457 TIGR02172 Fb_sc_TIGR02172 Fibr 98.8 1.1E-07 2.4E-12 80.4 13.3 138 72-213 7-182 (226)
458 PF06176 WaaY: Lipopolysacchar 98.7 3E-07 6.6E-12 75.7 11.4 135 65-213 30-183 (229)
459 COG1718 RIO1 Serine/threonine 98.6 1.1E-06 2.3E-11 73.4 11.9 153 53-214 32-216 (268)
460 cd05150 APH Aminoglycoside 3'- 98.5 1.5E-06 3.2E-11 74.6 12.8 138 74-213 6-193 (244)
461 PF01636 APH: Phosphotransfera 98.5 2E-06 4.3E-11 73.1 11.7 141 72-213 3-197 (239)
462 COG2112 Predicted Ser/Thr prot 98.5 1.5E-06 3.2E-11 68.6 9.2 128 71-213 27-155 (201)
463 PF10707 YrbL-PhoP_reg: PhoP r 98.4 1.4E-05 3.1E-10 65.6 13.4 127 70-207 5-165 (199)
464 cd05155 APH_ChoK_like_1 Unchar 98.4 3.3E-06 7.2E-11 72.0 10.0 73 72-148 3-82 (235)
465 PRK10593 hypothetical protein; 98.3 1.9E-05 4.2E-10 69.7 13.5 77 70-147 18-100 (297)
466 PLN02876 acyl-CoA dehydrogenas 98.3 1.7E-05 3.8E-10 79.8 14.2 76 71-146 43-130 (822)
467 KOG0576 Mitogen-activated prot 98.2 7E-08 1.5E-12 89.7 -2.9 182 72-266 248-431 (829)
468 cd05153 HomoserineK_II Homoser 98.1 2.1E-05 4.5E-10 69.6 10.7 141 71-213 19-205 (296)
469 cd05157 ETNK_euk Ethanolamine 98.1 3.8E-05 8.2E-10 65.5 11.9 72 72-147 4-79 (235)
470 TIGR02721 ycfN_thiK thiamine k 98.1 3.1E-05 6.6E-10 67.0 11.0 135 73-213 3-175 (256)
471 PRK05231 homoserine kinase; Pr 98.1 0.00013 2.8E-09 65.2 14.7 156 56-213 7-217 (319)
472 PF12260 PIP49_C: Protein-kina 98.1 2E-05 4.3E-10 64.5 8.1 102 109-214 8-112 (188)
473 TIGR00938 thrB_alt homoserine 98.0 0.00032 6.9E-09 62.4 14.8 156 57-213 8-217 (307)
474 KOG1035 eIF-2alpha kinase GCN2 97.9 4.8E-05 1E-09 76.0 8.5 195 108-334 230-435 (1351)
475 cd05156 ChoK_euk Choline Kinas 97.9 0.00013 2.8E-09 64.8 10.5 73 72-148 4-85 (302)
476 PF13095 FTA2: Kinetochore Sim 97.8 0.00051 1.1E-08 56.2 11.9 123 66-211 37-206 (207)
477 PRK09550 mtnK methylthioribose 97.7 0.0016 3.5E-08 59.5 14.1 73 72-146 32-117 (401)
478 cd05152 MPH2' Macrolide 2'-Pho 97.5 0.00087 1.9E-08 58.5 10.5 31 183-213 185-216 (276)
479 KOG2268 Serine/threonine prote 97.4 0.00019 4E-09 62.5 4.5 131 68-212 94-250 (465)
480 KOG2270 Serine/threonine prote 97.4 0.002 4.3E-08 57.3 10.3 137 72-214 150-314 (520)
481 COG3173 Predicted aminoglycosi 97.4 0.002 4.3E-08 56.9 10.5 130 77-214 36-229 (321)
482 PF03881 Fructosamin_kin: Fruc 97.3 0.0017 3.6E-08 56.9 9.7 74 70-145 21-97 (288)
483 PLN02756 S-methyl-5-thioribose 97.3 0.082 1.8E-06 48.5 20.6 71 71-144 37-119 (418)
484 COG2334 Putative homoserine ki 97.3 0.0063 1.4E-07 54.3 12.8 156 56-213 11-228 (331)
485 PLN02236 choline kinase 97.3 0.0034 7.5E-08 56.7 11.1 138 72-213 42-231 (344)
486 KOG1093 Predicted protein kina 97.1 0.0014 3E-08 60.6 6.4 70 83-154 6-76 (725)
487 PF07387 Seadorna_VP7: Seadorn 97.0 0.0044 9.5E-08 51.2 8.5 113 77-209 73-188 (308)
488 TIGR02906 spore_CotS spore coa 97.0 0.011 2.3E-07 52.7 11.7 30 182-212 186-215 (313)
489 PRK12396 5-methylribose kinase 97.0 0.059 1.3E-06 49.1 16.2 71 72-144 35-117 (409)
490 PRK11768 serine/threonine prot 97.0 0.093 2E-06 47.0 17.4 94 53-146 8-113 (325)
491 PLN02421 phosphotransferase, a 97.0 0.0074 1.6E-07 54.2 10.3 138 72-213 20-213 (330)
492 PRK06148 hypothetical protein; 96.9 0.013 2.7E-07 60.6 12.5 157 55-213 10-236 (1013)
493 TIGR02904 spore_ysxE spore coa 96.8 0.025 5.4E-07 50.3 12.2 32 182-213 195-226 (309)
494 KOG1236 Predicted unusual prot 96.5 0.0098 2.1E-07 53.7 7.0 63 134-200 319-381 (565)
495 TIGR01767 MTRK 5-methylthiorib 96.4 0.73 1.6E-05 41.6 20.1 71 73-145 2-85 (370)
496 KOG1826 Ras GTPase activating 96.1 0.00067 1.4E-08 70.1 -2.2 158 107-265 1276-1440(2724)
497 PTZ00384 choline kinase; Provi 96.0 0.076 1.7E-06 48.6 10.7 73 72-148 56-137 (383)
498 PF04655 APH_6_hur: Aminoglyco 96.0 0.063 1.4E-06 46.0 9.5 78 72-151 8-86 (253)
499 PF03109 ABC1: ABC1 family; I 95.8 0.0041 8.9E-08 46.7 1.4 46 71-117 16-61 (119)
500 COG3001 Uncharacterized protei 95.7 0.13 2.8E-06 43.0 9.7 73 74-148 24-99 (286)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-56 Score=397.85 Aligned_cols=285 Identities=41% Similarity=0.670 Sum_probs=246.9
Q ss_pred CcccccHHHHHHHhcCcccCCeeeecCCeeEEEEEeCCCCEEEEEEcccCCC--hhHHHHHHHHhhcCCCCcceeeeeEE
Q 040826 52 GLYRFSKDEIENAINNDWDRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNN--TDSFSREVEGLSRVRHPNLVCLFGCC 129 (347)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~ 129 (347)
....|+++++..+|++|...+.||+|+||.||+|.+.+|..||||++..... ..+|.+|+.++.+++|||+++++|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 5677999999999999999999999999999999999999999998887655 46799999999999999999999999
Q ss_pred EeCC-eEEEEEeecCCCChHHHhhcCCC-CCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEee
Q 040826 130 VEGG-EQYLVYEFCAAGNLAQHLLRKDS-VLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSD 207 (347)
Q Consensus 130 ~~~~-~~~lv~e~~~~gsL~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~d 207 (347)
.+.+ ..+|||||+++|+|.++++.... .++|..+++|+.++|+||+|||..+...|+||||||+|||+|+++++||+|
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsD 220 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSD 220 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccC
Confidence 9988 59999999999999999987665 899999999999999999999987777899999999999999999999999
Q ss_pred cccceecCCCccceeecc-cCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCCh-hhhhHHHHHHhhhcCC
Q 040826 208 FGLAKMLGMEESKVFTDV-RGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDF-DARDQLTRKARDVSMG 285 (347)
Q Consensus 208 fg~~~~~~~~~~~~~~~~-~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~-~~~~~~~~~~~~~~~~ 285 (347)
||++...... ....... .||.+|+|||++..+..+.++||||||++++||+||+++..... .....+..|+......
T Consensus 221 FGLa~~~~~~-~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~ 299 (361)
T KOG1187|consen 221 FGLAKLGPEG-DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEE 299 (361)
T ss_pred ccCcccCCcc-ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHC
Confidence 9999764321 1111222 79999999999999999999999999999999999998887543 2223355555444333
Q ss_pred CCCcccccCCCCC-CCCCH-HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 040826 286 KRPIKDFEDPRLN-GNINR-ADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAW 338 (347)
Q Consensus 286 ~~~~~~~~~~~l~-~~~~~-~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~ 338 (347)
. .+.+++||.+. +.... +....+.+++.+|++.+|.+||+|.+|++.|+.+.
T Consensus 300 ~-~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 300 G-KLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred c-chhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 2 68899999987 56664 68889999999999999999999999999997664
No 2
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-52 Score=368.17 Aligned_cols=264 Identities=25% Similarity=0.449 Sum_probs=229.3
Q ss_pred CcccccHHHHHHHhcCcccCCeeeecCCeeEEEEEeCCCCEEEEEEcccCC-ChhHHHHHHHHhhcCCCCcceeeeeEEE
Q 040826 52 GLYRFSKDEIENAINNDWDRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCV 130 (347)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~ 130 (347)
+...+..+++... +.||+|.||.||.|.++....||+|.+.... ..+.|.+|+++|++|+|+|||+++++|.
T Consensus 199 d~wei~r~~l~l~-------~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~ 271 (468)
T KOG0197|consen 199 DPWEIPREELKLI-------RELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCT 271 (468)
T ss_pred CCeeecHHHHHHH-------HHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEe
Confidence 3455666666544 5699999999999999877799999998754 4578999999999999999999999999
Q ss_pred eCCeEEEEEeecCCCChHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecc
Q 040826 131 EGGEQYLVYEFCAAGNLAQHLLR-KDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFG 209 (347)
Q Consensus 131 ~~~~~~lv~e~~~~gsL~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg 209 (347)
.++.++||||||+.|+|.++|+. .+..++..+.+.++.|||+|++||+ ++++|||||.+.||||++++.+||+|||
T Consensus 272 ~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLe---s~~~IHRDLAARNiLV~~~~~vKIsDFG 348 (468)
T KOG0197|consen 272 KQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLE---SKNYIHRDLAARNILVDEDLVVKISDFG 348 (468)
T ss_pred cCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHH---hCCccchhhhhhheeeccCceEEEcccc
Confidence 98899999999999999999986 6678999999999999999999999 8899999999999999999999999999
Q ss_pred cceecCCCccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCc
Q 040826 210 LAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPI 289 (347)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (347)
+++....+......+..-+..|.|||.+....++.+|||||||++||||+|-...+...+...+.+..+.+..+...
T Consensus 349 LAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~--- 425 (468)
T KOG0197|consen 349 LARLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPR--- 425 (468)
T ss_pred cccccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCC---
Confidence 99976655555666667788999999999999999999999999999999966655556666666666666655443
Q ss_pred ccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 040826 290 KDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWKN 340 (347)
Q Consensus 290 ~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~~ 340 (347)
+..|+.+++++|..||+.+|++|||++.+...|+++...
T Consensus 426 ------------P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 426 ------------PEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred ------------CCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 335778999999999999999999999999999998754
No 3
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-52 Score=355.87 Aligned_cols=250 Identities=27% Similarity=0.378 Sum_probs=211.2
Q ss_pred cccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCC-eEEEEEeec
Q 040826 68 DWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGG-EQYLVYEFC 142 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~~ 142 (347)
......||+|..|+||++.++ +++.+|+|++.-..+ .+++.+|++++++.+||+||.++|.|.+.. ...++||||
T Consensus 81 le~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYM 160 (364)
T KOG0581|consen 81 LERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYM 160 (364)
T ss_pred hhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhc
Confidence 344577999999999999954 789999999954433 457899999999999999999999999988 599999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcccee
Q 040826 143 AAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVF 222 (347)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 222 (347)
++|+|.+++... +.+++....+++.++++||.|||+ .++|+||||||+|+|++..|.+||||||.+..+... ..
T Consensus 161 DgGSLd~~~k~~-g~i~E~~L~~ia~~VL~GL~YLh~--~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS---~a 234 (364)
T KOG0581|consen 161 DGGSLDDILKRV-GRIPEPVLGKIARAVLRGLSYLHE--ERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS---IA 234 (364)
T ss_pred CCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhh--ccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh---hc
Confidence 999999988654 569999999999999999999995 479999999999999999999999999999986433 45
Q ss_pred ecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCC
Q 040826 223 TDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNIN 302 (347)
Q Consensus 223 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 302 (347)
.+.+||..|||||.+.+..|+.++||||||++++|+.+|+.|+..+........+....+..+..+ .+...
T Consensus 235 ~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP-------~lP~~-- 305 (364)
T KOG0581|consen 235 NTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPP-------RLPEG-- 305 (364)
T ss_pred ccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCC-------CCCcc--
Confidence 667899999999999999999999999999999999999999987633333444444444444332 11111
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 303 RADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 303 ~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
.+.++++.++..||++||.+|||+.|++++
T Consensus 306 -~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 306 -EFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred -cCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 355789999999999999999999999863
No 4
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-51 Score=362.69 Aligned_cols=252 Identities=32% Similarity=0.483 Sum_probs=211.0
Q ss_pred CCeeeecCCeeEEEEEeCCCCEEEEEEcccCCC----hhHHHHHHHHhhcCCCCcceeeeeEEEeCC-eEEEEEeecCCC
Q 040826 71 RRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNN----TDSFSREVEGLSRVRHPNLVCLFGCCVEGG-EQYLVYEFCAAG 145 (347)
Q Consensus 71 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~~~~g 145 (347)
.+.+|+|+||+||+|.+.....||+|.+..... ...|.+|+.+|.+++||||++++|++.+.. ..++||||+++|
T Consensus 46 ~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~G 125 (362)
T KOG0192|consen 46 EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGG 125 (362)
T ss_pred hhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCC
Confidence 345999999999999996555599999976431 348999999999999999999999999887 799999999999
Q ss_pred ChHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHhhhccCCC-ceeCCCCCCCEEecCCC-ceEEeecccceecCCCcccee
Q 040826 146 NLAQHLLR-KDSVLTWERRVKILRDCALALRYLHHYIDGC-IVHRDIKLTNILLTEKL-EPKLSDFGLAKMLGMEESKVF 222 (347)
Q Consensus 146 sL~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~-i~H~dl~p~Nili~~~~-~~kl~dfg~~~~~~~~~~~~~ 222 (347)
+|.+++.. ....+++..+++++.|+|+||.||| +.+ |+||||||+|+|++.++ ++||+|||+++...... ...
T Consensus 126 sL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH---~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~-~~~ 201 (362)
T KOG0192|consen 126 SLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLH---SEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK-TSM 201 (362)
T ss_pred cHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc-ccc
Confidence 99999987 4678999999999999999999999 777 99999999999999998 99999999998764322 334
Q ss_pred ecccCCCCcccccccc--CCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCC
Q 040826 223 TDVRGTIGYMDPEYMT--NAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGN 300 (347)
Q Consensus 223 ~~~~~~~~y~aPE~~~--~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 300 (347)
+...||+.|||||++. ...|+.++||||||+++|||+||+.||..... .......+ ..+.++ .
T Consensus 202 ~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-~~~~~~v~---~~~~Rp-----------~ 266 (362)
T KOG0192|consen 202 TSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-VQVASAVV---VGGLRP-----------P 266 (362)
T ss_pred cCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-HHHHHHHH---hcCCCC-----------C
Confidence 4468999999999999 56999999999999999999999999985443 22222221 122222 2
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 040826 301 INRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWKNT 341 (347)
Q Consensus 301 ~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~~~ 341 (347)
++..+...+..|+.+||+.||..||++.+|+..|+.+.+..
T Consensus 267 ~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~ 307 (362)
T KOG0192|consen 267 IPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHI 307 (362)
T ss_pred CCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhh
Confidence 23335678999999999999999999999999999987644
No 5
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-50 Score=363.72 Aligned_cols=246 Identities=27% Similarity=0.450 Sum_probs=214.2
Q ss_pred cCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccC-----CChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKS-----NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVY 139 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 139 (347)
.+|...+.||+|||+.||.++. .+|+.||+|++.+. ...+...+|+++.+.|+|||||+++++|++.+++|+|+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 3577788999999999999996 89999999999763 34567889999999999999999999999999999999
Q ss_pred eecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcc
Q 040826 140 EFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES 219 (347)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 219 (347)
|+|+.++|..+++ ....+++.+++.+++||+.||.||| +.+|+|||||..|+|++++.++||+|||+|..+..+ .
T Consensus 98 ELC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYLH---~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~-~ 172 (592)
T KOG0575|consen 98 ELCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYLH---SLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD-G 172 (592)
T ss_pred EecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHHH---hcCceecccchhheeecCcCcEEecccceeeeecCc-c
Confidence 9999999999886 5567999999999999999999999 889999999999999999999999999999998643 3
Q ss_pred ceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCC
Q 040826 220 KVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNG 299 (347)
Q Consensus 220 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 299 (347)
......+||+.|.|||++....++..+||||+||++|-||.|++||+ .+.+.+..+.+......++.
T Consensus 173 Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFe-----tk~vkety~~Ik~~~Y~~P~-------- 239 (592)
T KOG0575|consen 173 ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFE-----TKTVKETYNKIKLNEYSMPS-------- 239 (592)
T ss_pred cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcc-----cchHHHHHHHHHhcCccccc--------
Confidence 34456789999999999999999999999999999999999999998 44444455555544433332
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 300 NINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 300 ~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
....+..+|+..+|++||.+|||+.+|+..
T Consensus 240 ----~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 240 ----HLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred ----ccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 233578999999999999999999999863
No 6
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.8e-51 Score=333.28 Aligned_cols=254 Identities=28% Similarity=0.418 Sum_probs=210.8
Q ss_pred CcccCCeeeecCCeeEEEEE-eCCCCEEEEEEcccCC----ChhHHHHHHHHhhcCCCCcceeeee-EEEeCC-eEEEEE
Q 040826 67 NDWDRRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLVCLFG-CCVEGG-EQYLVY 139 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~h~niv~~~~-~~~~~~-~~~lv~ 139 (347)
+|...++||+|.||.||++. ..+|..+|.|.+.-.. ..+.+..|+.+|++|+||||+++++ .+..++ ..++||
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm 99 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM 99 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence 45556789999999999998 6789999999987432 2457889999999999999999998 344444 489999
Q ss_pred eecCCCChHHHhh---cCCCCCCHHHHHHHHHHHHHHHHHhhhccC-CCceeCCCCCCCEEecCCCceEEeecccceecC
Q 040826 140 EFCAAGNLAQHLL---RKDSVLTWERRVKILRDCALALRYLHHYID-GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLG 215 (347)
Q Consensus 140 e~~~~gsL~~~l~---~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~-~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 215 (347)
|+|+.|+|...++ +....+++..+|+++.|++.||.++|+... .-+.||||||.||+++.+|.+||+|||+++.+.
T Consensus 100 E~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~ 179 (375)
T KOG0591|consen 100 ELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLS 179 (375)
T ss_pred HhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhc
Confidence 9999999999885 345779999999999999999999996322 238999999999999999999999999999876
Q ss_pred CCccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCC
Q 040826 216 MEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDP 295 (347)
Q Consensus 216 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (347)
.. .....+.+||+.||+||.+.+.+|+.+|||||+||++|||+...+||.+. .+.+..+.+..++.+
T Consensus 180 s~-~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-----n~~~L~~KI~qgd~~------- 246 (375)
T KOG0591|consen 180 SK-TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-----NLLSLCKKIEQGDYP------- 246 (375)
T ss_pred ch-hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-----cHHHHHHHHHcCCCC-------
Confidence 43 33345678999999999999999999999999999999999999999854 455566666666432
Q ss_pred CCCCCCC-HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 040826 296 RLNGNIN-RADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKA 337 (347)
Q Consensus 296 ~l~~~~~-~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~ 337 (347)
+++ ...++.+.+++..|+..||+.||+...++..+..-
T Consensus 247 ----~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~~ 285 (375)
T KOG0591|consen 247 ----PLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQSE 285 (375)
T ss_pred ----CCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHHH
Confidence 222 45668899999999999999999976666665553
No 7
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.5e-50 Score=342.16 Aligned_cols=252 Identities=27% Similarity=0.390 Sum_probs=206.0
Q ss_pred HhcCcccCCeeeecCCeeEEEEE-eCCCCEEEEEEcccCC---------ChhHHHHHHHHhhcCCCCcceeeeeEEEeCC
Q 040826 64 AINNDWDRRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSN---------NTDSFSREVEGLSRVRHPNLVCLFGCCVEGG 133 (347)
Q Consensus 64 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~---------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 133 (347)
..+.|...+.||+|+||.|-+|. .++|+.||||.+.+.. ......+|+++|++++|||||+++++++..+
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 34567778899999999999999 5689999999997642 1123569999999999999999999999999
Q ss_pred eEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCC---CceEEeeccc
Q 040826 134 EQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEK---LEPKLSDFGL 210 (347)
Q Consensus 134 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~---~~~kl~dfg~ 210 (347)
..|+||||++||.|.+.+..+. .+.+..-..+++|++.|+.||| ++||+||||||+|||+..+ ..+||+|||+
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk-~l~ed~~K~~f~Qll~avkYLH---~~GI~HRDiKPeNILl~~~~e~~llKItDFGl 325 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANK-YLREDLGKLLFKQLLTAVKYLH---SQGIIHRDIKPENILLSNDAEDCLLKITDFGL 325 (475)
T ss_pred ceEEEEEEecCccHHHHHHhcc-ccccchhHHHHHHHHHHHHHHH---HcCcccccCCcceEEeccCCcceEEEecccch
Confidence 9999999999999999997654 3677777889999999999999 8999999999999999866 7799999999
Q ss_pred ceecCCCccceeecccCCCCccccccccCCc---cCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCC
Q 040826 211 AKMLGMEESKVFTDVRGTIGYMDPEYMTNAK---LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKR 287 (347)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 287 (347)
|...+ ...-+...+||+.|.|||++.+.. +..++|+||+||+||-+++|.+||.....+.. ..+.+..|..
T Consensus 326 AK~~g--~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~s----l~eQI~~G~y 399 (475)
T KOG0615|consen 326 AKVSG--EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPS----LKEQILKGRY 399 (475)
T ss_pred hhccc--cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCcc----HHHHHhcCcc
Confidence 99865 344567789999999999998654 33488999999999999999999985433321 2222333433
Q ss_pred CcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 288 PIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 288 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
.... ..-....++..+|+.++|..||++|||+.|++++
T Consensus 400 ~f~p--------~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 400 AFGP--------LQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred cccC--------hhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 2221 1123455789999999999999999999998763
No 8
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1e-48 Score=336.01 Aligned_cols=246 Identities=27% Similarity=0.445 Sum_probs=197.8
Q ss_pred hcCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEE
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVY 139 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 139 (347)
..+|...+.||+|+||.||+|++ .++..||||.+.... ..+.+..|+.+|+.++|||||.+++++..++..+|||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 35677778899999999999995 468999999998764 3456789999999999999999999999999999999
Q ss_pred eecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCC------CceEEeeccccee
Q 040826 140 EFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEK------LEPKLSDFGLAKM 213 (347)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~------~~~kl~dfg~~~~ 213 (347)
|||+||+|.++++..+ .+++..+..++.|++.||++|| +++|+||||||.|||++.. -.+||+|||+++.
T Consensus 89 EyC~gGDLs~yi~~~~-~l~e~t~r~Fm~QLA~alq~L~---~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~ 164 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRRG-RLPEATARHFMQQLASALQFLH---ENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARF 164 (429)
T ss_pred EeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCcceEEeccCCCCCCCceEEecccchhhh
Confidence 9999999999997665 5899999999999999999999 8999999999999999864 4589999999998
Q ss_pred cCCCccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCccccc
Q 040826 214 LGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFE 293 (347)
Q Consensus 214 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (347)
+. ........+|++.|||||++...+|+.|+|+||+|+++|++++|+.||...... +....+..+...+.
T Consensus 165 L~--~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~-----eL~~~~~k~~~~~~--- 234 (429)
T KOG0595|consen 165 LQ--PGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPK-----ELLLYIKKGNEIVP--- 234 (429)
T ss_pred CC--chhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHH-----HHHHHHhccccccC---
Confidence 75 344456688999999999999999999999999999999999999999843322 22222222222111
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHH
Q 040826 294 DPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVV 330 (347)
Q Consensus 294 ~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei 330 (347)
.+.......+.+|....++.+|.+|-++.+-
T Consensus 235 ------~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~ 265 (429)
T KOG0595|consen 235 ------VLPAELSNPLRELLISLLQRNPKDRISFEDF 265 (429)
T ss_pred ------chhhhccCchhhhhhHHHhcCccccCchHHh
Confidence 1111222234466666667777777665543
No 9
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.4e-48 Score=322.67 Aligned_cols=260 Identities=27% Similarity=0.327 Sum_probs=211.8
Q ss_pred CcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCCh----hHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNT----DSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~----~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
.|+...++|+|+||.||+|+.+ +|+.||||++..+.+. .-..+|+.+|++++|+|+|.++++|.....++|||||
T Consensus 3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~ 82 (396)
T KOG0593|consen 3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY 82 (396)
T ss_pred HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence 4566678999999999999954 7999999999876653 3578999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccce
Q 040826 142 CAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKV 221 (347)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 221 (347)
|+. ++.+-+.....-.+.....+++.|++.|+.|+| +++++||||||+||||+.+|.+||||||.|+.+.. +...
T Consensus 83 ~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cH---k~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~-pgd~ 157 (396)
T KOG0593|consen 83 CDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFCH---KNNCIHRDIKPENILITQNGVVKLCDFGFARTLSA-PGDN 157 (396)
T ss_pred cch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhh---hcCeecccCChhheEEecCCcEEeccchhhHhhcC-Ccch
Confidence 998 777778777777899999999999999999999 89999999999999999999999999999998753 4445
Q ss_pred eecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCC----------CCC--
Q 040826 222 FTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMG----------KRP-- 288 (347)
Q Consensus 222 ~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~----------~~~-- 288 (347)
.+..+.|.+|.|||.+.+ .+|...+||||+||++.||++|.+.|.+.. +.+++..+......- ..-
T Consensus 158 YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~S-DiDQLy~I~ktLG~L~prhq~iF~~N~~F~ 236 (396)
T KOG0593|consen 158 YTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRS-DIDQLYLIRKTLGNLIPRHQSIFSSNPFFH 236 (396)
T ss_pred hhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcc-hHHHHHHHHHHHcccCHHHHHHhccCCcee
Confidence 667789999999999987 689999999999999999999999887543 345554444432211 111
Q ss_pred ---cccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 289 ---IKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 289 ---~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
+++..+++--....++...-+.+++..||+.||++|+|.++++.
T Consensus 237 Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 237 GVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred eeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 11111221111122344567899999999999999999999875
No 10
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-48 Score=328.50 Aligned_cols=240 Identities=28% Similarity=0.353 Sum_probs=202.4
Q ss_pred hcCcccCCeeeecCCeeEEEEE-eCCCCEEEEEEcccC-----CChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEE
Q 040826 65 INNDWDRRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKS-----NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLV 138 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 138 (347)
.++|...+.||+|+||.||.++ .++++.+|+|++.+. .+.+...+|..+|.+++||.||+++..|++.+..|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 3567788999999999999999 457999999999764 3456788999999999999999999999999999999
Q ss_pred EeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCc
Q 040826 139 YEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE 218 (347)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 218 (347)
+||+.||.|..++.+. +.+++..+.-++..|+.||.||| +.||+||||||+|||+|.+|.++|+|||+++... ..
T Consensus 104 ld~~~GGeLf~hL~~e-g~F~E~~arfYlaEi~lAL~~LH---~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~-~~ 178 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQRE-GRFSEDRARFYLAEIVLALGYLH---SKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDL-KD 178 (357)
T ss_pred EeccCCccHHHHHHhc-CCcchhHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHeeecCCCcEEEeccccchhcc-cC
Confidence 9999999999999654 45999999999999999999999 8999999999999999999999999999999643 23
Q ss_pred cceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCC
Q 040826 219 SKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLN 298 (347)
Q Consensus 219 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 298 (347)
.......+||+.|||||++.+.+|+.++|+||||+++|+|++|.+||.... ...+.+.+..+...
T Consensus 179 ~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~-----~~~~~~~I~~~k~~---------- 243 (357)
T KOG0598|consen 179 GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAED-----VKKMYDKILKGKLP---------- 243 (357)
T ss_pred CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCcc-----HHHHHHHHhcCcCC----------
Confidence 344556799999999999999999999999999999999999999998543 22233333333311
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCC
Q 040826 299 GNINRADFESILKIAVLCVAKSSKGRP 325 (347)
Q Consensus 299 ~~~~~~~~~~l~~l~~~cl~~~p~~Rp 325 (347)
..+.-...+..+++...|..||++|.
T Consensus 244 -~~p~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 244 -LPPGYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred -CCCccCCHHHHHHHHHHhccCHHHhc
Confidence 01111235788999999999999996
No 11
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.3e-47 Score=332.41 Aligned_cols=263 Identities=25% Similarity=0.325 Sum_probs=214.8
Q ss_pred hcCcccCCeeeecCCeeEEEEE-eCCCCEEEEEEcccCCC----hhHHHHHHHHhhcCCCCcceeeeeEEEeC--CeEEE
Q 040826 65 INNDWDRRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNN----TDSFSREVEGLSRVRHPNLVCLFGCCVEG--GEQYL 137 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~l 137 (347)
.+.|...++||+|.||+||+|+ ..+|+.||+|++..+.. .....+|+.+|++|+||||+++.+...+. ..+||
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 3446666889999999999999 66899999999976543 34677999999999999999999998876 68999
Q ss_pred EEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCC
Q 040826 138 VYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217 (347)
Q Consensus 138 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 217 (347)
|||||+. +|..++...+-.|++.++..+++|+++||.|+| .+|+.|||||.+|||||.+|.+||+|||+|+.+...
T Consensus 196 VFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH---~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~ 271 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCH---SRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPS 271 (560)
T ss_pred EEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHh---hcCeeeccccccceEEcCCCCEEeccccceeeccCC
Confidence 9999999 999988777778999999999999999999999 899999999999999999999999999999998777
Q ss_pred ccceeecccCCCCccccccccCC-ccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCC------cc
Q 040826 218 ESKVFTDVRGTIGYMDPEYMTNA-KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRP------IK 290 (347)
Q Consensus 218 ~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~------~~ 290 (347)
.....+..+.|.+|.|||.+.|. .|+.++|+||.||||.||++|++.+.+ ....+++..+.+..-..... ++
T Consensus 272 ~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G-~tEveQl~kIfklcGSP~e~~W~~~kLP 350 (560)
T KOG0600|consen 272 GSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQG-RTEVEQLHKIFKLCGSPTEDYWPVSKLP 350 (560)
T ss_pred CCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCC-ccHHHHHHHHHHHhCCCChhccccccCC
Confidence 76667888899999999999875 699999999999999999999998874 34455666655543322211 11
Q ss_pred --cccCCCCC-----CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 291 --DFEDPRLN-----GNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 291 --~~~~~~l~-----~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
..+.+.-. .+.-....+...+|+..+|..||++|.|+.++++
T Consensus 351 ~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 351 HATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred cccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 11111100 0001123357888999999999999999998875
No 12
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.8e-47 Score=354.52 Aligned_cols=257 Identities=25% Similarity=0.409 Sum_probs=214.0
Q ss_pred cCcccCCeeeecCCeeEEEEEeC------CCCEEEEEEcccCCCh---hHHHHHHHHhhcCCCCcceeeeeEEEeCCeEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP------SGQVVAIKHIYKSNNT---DSFSREVEGLSRVRHPNLVCLFGCCVEGGEQY 136 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~---~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 136 (347)
.+....+.||+|+||.||+|... +...||||.++...+. .+|.+|++++..++|||||+++|+|..++..+
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~ 565 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLC 565 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeE
Confidence 34455677999999999999832 3457999999876654 58999999999999999999999999999999
Q ss_pred EEEeecCCCChHHHhhcC---------CC----CCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCce
Q 040826 137 LVYEFCAAGNLAQHLLRK---------DS----VLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP 203 (347)
Q Consensus 137 lv~e~~~~gsL~~~l~~~---------~~----~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~ 203 (347)
+|||||..|+|.++|... +. +++..+.+.|+.|||.|+.||. ++.++||||..+|+||.++..|
T Consensus 566 MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs---~~~FVHRDLATRNCLVge~l~V 642 (774)
T KOG1026|consen 566 MVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLS---SHHFVHRDLATRNCLVGENLVV 642 (774)
T ss_pred EEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCcccccchhhhhceeccceEE
Confidence 999999999999999531 22 3889999999999999999999 7889999999999999999999
Q ss_pred EEeecccceecCCCccceee-cccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhh
Q 040826 204 KLSDFGLAKMLGMEESKVFT-DVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARD 281 (347)
Q Consensus 204 kl~dfg~~~~~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~ 281 (347)
||+|||+++..=..++.... ...-+.+|||||.+..++||.+||||||||+|||+++ |+.|+. +....+-+..+...
T Consensus 643 KIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~-glSn~EVIe~i~~g 721 (774)
T KOG1026|consen 643 KISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYY-GLSNQEVIECIRAG 721 (774)
T ss_pred EecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCccc-ccchHHHHHHHHcC
Confidence 99999999875444444433 4556889999999999999999999999999999998 555554 33333333333322
Q ss_pred hcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 040826 282 VSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWKNT 341 (347)
Q Consensus 282 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~~~ 341 (347)
... +.++.++.+++.||..||+.+|.+|||+.||-..|++..+++
T Consensus 722 ~lL---------------~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s 766 (774)
T KOG1026|consen 722 QLL---------------SCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQAS 766 (774)
T ss_pred Ccc---------------cCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcC
Confidence 211 445577889999999999999999999999999999987654
No 13
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-47 Score=333.15 Aligned_cols=261 Identities=23% Similarity=0.311 Sum_probs=211.6
Q ss_pred hcCcccCCeeeecCCeeEEEEE-eCCCCEEEEEEcccCCC-hh--HHHHHHHHhhcCC-CCcceeeeeEEEeCC-eEEEE
Q 040826 65 INNDWDRRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNN-TD--SFSREVEGLSRVR-HPNLVCLFGCCVEGG-EQYLV 138 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~-~~--~~~~e~~~l~~l~-h~niv~~~~~~~~~~-~~~lv 138 (347)
-++|...++||.|.||+||+|+ ..+|+.||||++...-. .+ .=.+|+..|++++ ||||+++.+++.+.+ .+++|
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV 88 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV 88 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence 4677788899999999999999 45799999999876422 22 3458999999999 999999999998877 99999
Q ss_pred EeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCc
Q 040826 139 YEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE 218 (347)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 218 (347)
||||+. +|+++++..+..+++..++.|+.||++||+|+| .+|++|||+||+|||+..+..+||+|||+|+....
T Consensus 89 fE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiH---k~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S-- 162 (538)
T KOG0661|consen 89 FEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIH---KHGFFHRDLKPENILISGNDVIKIADFGLAREVRS-- 162 (538)
T ss_pred HHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHH---hcCcccccCChhheEecccceeEeccccccccccc--
Confidence 999988 999999888899999999999999999999999 89999999999999999999999999999998743
Q ss_pred cceeecccCCCCcccccccc-CCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCC---------
Q 040826 219 SKVFTDVRGTIGYMDPEYMT-NAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRP--------- 288 (347)
Q Consensus 219 ~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--------- 288 (347)
....+..+.|.+|.|||++. ...|+.+.|+||+||+++|+.+.++.|.+. ...|++..+...+......
T Consensus 163 kpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~-sE~Dqi~KIc~VLGtP~~~~~~eg~~La 241 (538)
T KOG0661|consen 163 KPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGA-SEIDQIYKICEVLGTPDKDSWPEGYNLA 241 (538)
T ss_pred CCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCC-cHHHHHHHHHHHhCCCccccchhHHHHH
Confidence 34456678999999999875 568999999999999999999999988643 3344555444443222100
Q ss_pred ------cccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 289 ------IKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 289 ------~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
.+......+..-+ ..+..+..+|+.+|++.||++|||+.|.++.
T Consensus 242 ~~mnf~~P~~~~~~l~~L~-p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 242 SAMNFRFPQVKPSPLKDLL-PNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HHhccCCCcCCCCChHHhC-cccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 0111111111112 2356789999999999999999999998863
No 14
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-46 Score=324.27 Aligned_cols=252 Identities=31% Similarity=0.418 Sum_probs=201.3
Q ss_pred CcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC--hhHHHHHHHHhhcCCCCcceeeeeEEEeCC--eEEEEEee
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN--TDSFSREVEGLSRVRHPNLVCLFGCCVEGG--EQYLVYEF 141 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e~ 141 (347)
++...+.||+|+||.||++... +|+..|||.+..... .+.+.+|+.+|++++|||||+++|...... .+++.|||
T Consensus 18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy 97 (313)
T KOG0198|consen 18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEY 97 (313)
T ss_pred hhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeec
Confidence 3445678999999999999965 589999998865421 456889999999999999999999855544 68999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecC-CCceEEeecccceecCC--Cc
Q 040826 142 CAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTE-KLEPKLSDFGLAKMLGM--EE 218 (347)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~-~~~~kl~dfg~~~~~~~--~~ 218 (347)
+++|+|.+++...++.+++..+..+.+|+++||.||| ++|++||||||+|||++. ++.+||+|||++..... ..
T Consensus 98 ~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylH---s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~ 174 (313)
T KOG0198|consen 98 APGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLH---SKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTK 174 (313)
T ss_pred cCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCcccceEEEeCCCCeEEeccCcccccccccccc
Confidence 9999999999876657999999999999999999999 899999999999999999 79999999999987652 12
Q ss_pred cceeecccCCCCccccccccCC-ccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCC
Q 040826 219 SKVFTDVRGTIGYMDPEYMTNA-KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRL 297 (347)
Q Consensus 219 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 297 (347)
........||+.|||||++.++ ....++|||||||++.||+||++|+..... .............. |
T Consensus 175 ~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~---~~~~~~~ig~~~~~-------P-- 242 (313)
T KOG0198|consen 175 SDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFE---EAEALLLIGREDSL-------P-- 242 (313)
T ss_pred ccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcc---hHHHHHHHhccCCC-------C--
Confidence 2224456799999999999953 334599999999999999999999874211 11111222211111 1
Q ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 040826 298 NGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEID 335 (347)
Q Consensus 298 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~ 335 (347)
.++...+.+..+++..|+..||.+|||+.+++++--
T Consensus 243 --~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf 278 (313)
T KOG0198|consen 243 --EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPF 278 (313)
T ss_pred --CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChh
Confidence 223334467999999999999999999999998643
No 15
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=4.8e-46 Score=302.52 Aligned_cols=261 Identities=26% Similarity=0.353 Sum_probs=215.0
Q ss_pred cCcccCCeeeecCCeeEEEEE-eCCCCEEEEEEcccCCC----hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEe
Q 040826 66 NNDWDRRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNN----TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYE 140 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 140 (347)
.+|...+.+|+|.||.||+|+ ..+|+.||+|++.-... .....+|+..|+.++|+||+.++++|...+...+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 356667889999999999999 56899999999975432 3478899999999999999999999999999999999
Q ss_pred ecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccc
Q 040826 141 FCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220 (347)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 220 (347)
|++. +|...++.+.-.++..++..++.+++.|++||| .+.|.||||||.|+|++.+|.+|++|||+++.+......
T Consensus 82 fm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H---~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~ 157 (318)
T KOG0659|consen 82 FMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCH---SKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRI 157 (318)
T ss_pred eccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHH---hhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcc
Confidence 9998 999999888889999999999999999999999 889999999999999999999999999999998754433
Q ss_pred eeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCC-------Cc---
Q 040826 221 VFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKR-------PI--- 289 (347)
Q Consensus 221 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~-------~~--- 289 (347)
. ...+.|.+|.|||.+.| ..|+..+|+||.||++.||+-|.+.|. +..+-+++..+.+....... .+
T Consensus 158 ~-~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fp-G~sDidQL~~If~~LGTP~~~~WP~~~~lpdY 235 (318)
T KOG0659|consen 158 Q-THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFP-GDSDIDQLSKIFRALGTPTPDQWPEMTSLPDY 235 (318)
T ss_pred c-ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCC-CCchHHHHHHHHHHcCCCCcccCccccccccH
Confidence 3 33378999999999887 579999999999999999998876665 44556777777666533211 11
Q ss_pred ---ccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 290 ---KDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 290 ---~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
..+..+.++. +-.....+..+|+..+|..||.+|+|+.|.+++
T Consensus 236 ~~~~~~P~~~~~~-lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 236 VKIQQFPKPPLNN-LFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred HHHhcCCCCcccc-ccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 1111222222 223445677999999999999999999999864
No 16
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-46 Score=330.95 Aligned_cols=250 Identities=24% Similarity=0.319 Sum_probs=209.4
Q ss_pred HHhcCcccCCeeeecCCeeEEEEE-eCCCCEEEEEEcccC-----CChhHHHHHHHHhhcC-CCCcceeeeeEEEeCCeE
Q 040826 63 NAINNDWDRRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKS-----NNTDSFSREVEGLSRV-RHPNLVCLFGCCVEGGEQ 135 (347)
Q Consensus 63 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~-----~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 135 (347)
.-..+|.+.+.||.|+|++|++|+ ..+++.+|+|++.+. ........|-++|.+| +||.|++++..|.++..+
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL 149 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL 149 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence 345678899999999999999999 558999999998764 2344677889999999 799999999999999999
Q ss_pred EEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecC
Q 040826 136 YLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLG 215 (347)
Q Consensus 136 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 215 (347)
|+|+||+++|.|.+++.+. +.+++...+.++++|+.||+||| +.|||||||||+|||+|+|+.++|+|||.+..+.
T Consensus 150 YFvLe~A~nGdll~~i~K~-Gsfde~caR~YAAeIldAleylH---~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~ 225 (604)
T KOG0592|consen 150 YFVLEYAPNGDLLDLIKKY-GSFDETCARFYAAEILDALEYLH---SNGIIHRDLKPENILLDKDGHIKITDFGSAKILS 225 (604)
T ss_pred EEEEEecCCCcHHHHHHHh-CcchHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeEcCCCcEEEeeccccccCC
Confidence 9999999999999999765 45999999999999999999999 8999999999999999999999999999998874
Q ss_pred CCccc---------e---eecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhc
Q 040826 216 MEESK---------V---FTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVS 283 (347)
Q Consensus 216 ~~~~~---------~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~ 283 (347)
..... . ...++||..|.+||++.+...+..+|+|+|||++|+|+.|.+||....... ..+.+.
T Consensus 226 ~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyl-----iFqkI~ 300 (604)
T KOG0592|consen 226 PSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYL-----IFQKIQ 300 (604)
T ss_pred hhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHH-----HHHHHH
Confidence 32111 1 145789999999999999999999999999999999999999998654321 122222
Q ss_pred CCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 284 MGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 284 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
.... .+++...+.+.+|+.+.|..||.+|+|.++|-++
T Consensus 301 ~l~y------------~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 301 ALDY------------EFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred Hhcc------------cCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 1111 2223344689999999999999999999888654
No 17
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-47 Score=337.65 Aligned_cols=263 Identities=26% Similarity=0.443 Sum_probs=213.5
Q ss_pred HHHHHHhcCcccCCeeeecCCeeEEEEEeCCCCEEEEEEcccCCC----hhHHHHHHHHhhcCCCCcceeeeeEEEeCCe
Q 040826 59 DEIENAINNDWDRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNN----TDSFSREVEGLSRVRHPNLVCLFGCCVEGGE 134 (347)
Q Consensus 59 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 134 (347)
++++...++......||+|.||+||+|.|. | .||||++....- .+.|.+|+.++++-+|.||+-+.|++.....
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh-G-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~ 462 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWH-G-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL 462 (678)
T ss_pred cccccCHHHhhccceeccccccceeecccc-c-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce
Confidence 455555666667788999999999999985 3 489999976432 3579999999999999999999999988766
Q ss_pred EEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceec
Q 040826 135 QYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKML 214 (347)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~ 214 (347)
.+|+.+|+|-+|+.+++.....|.....++|++|+++|+.||| .++|+|+|||..||++.++++|||+|||++..-
T Consensus 463 -AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLH---AK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk 538 (678)
T KOG0193|consen 463 -AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLH---AKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVK 538 (678)
T ss_pred -eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhh---hhhhhhhhccccceEEccCCcEEEecccceeee
Confidence 9999999999999999887778999999999999999999999 899999999999999999999999999998753
Q ss_pred C-CCccceeecccCCCCccccccccC---CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcc
Q 040826 215 G-MEESKVFTDVRGTIGYMDPEYMTN---AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIK 290 (347)
Q Consensus 215 ~-~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (347)
. ...........|...|||||++.. .+|++.+||||||+++|||+||..|+. ....+.-+..+-++...
T Consensus 539 ~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys-i~~~dqIifmVGrG~l~------ 611 (678)
T KOG0193|consen 539 TRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS-IQNRDQIIFMVGRGYLM------ 611 (678)
T ss_pred eeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC-CCChhheEEEecccccC------
Confidence 2 122233444568899999999863 579999999999999999999999998 22222211111111111
Q ss_pred cccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 040826 291 DFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWK 339 (347)
Q Consensus 291 ~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~ 339 (347)
+.+. -...++..++.+|+..||..++++||.+.+|+..|+.++.
T Consensus 612 ----pd~s-~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 612 ----PDLS-KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred ----ccch-hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 1111 1233566799999999999999999999999999999876
No 18
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-45 Score=329.41 Aligned_cols=247 Identities=28% Similarity=0.397 Sum_probs=210.2
Q ss_pred HhcCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccC----C---ChhHHHHHHHHhhcCC-CCcceeeeeEEEeCCe
Q 040826 64 AINNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKS----N---NTDSFSREVEGLSRVR-HPNLVCLFGCCVEGGE 134 (347)
Q Consensus 64 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~----~---~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~ 134 (347)
...+|...+.||+|+||.|+.|.. .+|+.||+|.+... . ......+|+.++++++ ||||++++.++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 356788889999999999999984 47899999976553 1 2345668999999998 9999999999999999
Q ss_pred EEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCC-CceEEeeccccee
Q 040826 135 QYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEK-LEPKLSDFGLAKM 213 (347)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~-~~~kl~dfg~~~~ 213 (347)
.++||||+.||.|.+++.+ .+++.+..+.++++|++.|++|+| ++||+||||||+|++++.+ +++||+|||++..
T Consensus 95 ~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H---~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~ 170 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCH---SRGIVHRDLKPENILLDGNEGNLKLSDFGLSAI 170 (370)
T ss_pred EEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEecCCCCCEEEeccccccc
Confidence 9999999999999999987 667999999999999999999999 8999999999999999999 9999999999997
Q ss_pred cCCCccceeecccCCCCccccccccCCc-cC-CcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCccc
Q 040826 214 LGMEESKVFTDVRGTIGYMDPEYMTNAK-LT-CASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKD 291 (347)
Q Consensus 214 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~-~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (347)
.. .........+|++.|+|||++.+.. |+ .++||||+|++||.|++|..||.. .......+.+..+...++.
T Consensus 171 ~~-~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d-----~~~~~l~~ki~~~~~~~p~ 244 (370)
T KOG0583|consen 171 SP-GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDD-----SNVPNLYRKIRKGEFKIPS 244 (370)
T ss_pred cC-CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCC-----ccHHHHHHHHhcCCccCCC
Confidence 63 2334456678999999999999877 76 789999999999999999999985 2222333335555544443
Q ss_pred ccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHH
Q 040826 292 FEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVY 331 (347)
Q Consensus 292 ~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~ 331 (347)
.+. ..++..|+.+|+..||.+|+|+.+|+
T Consensus 245 ~~~-----------S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 245 YLL-----------SPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred CcC-----------CHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 331 35799999999999999999999998
No 19
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-45 Score=317.54 Aligned_cols=258 Identities=28% Similarity=0.397 Sum_probs=208.7
Q ss_pred hcCcccCCeeeecCCeeEEEEE-eCCCCEEEEEEcccCC---ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEe
Q 040826 65 INNDWDRRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSN---NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYE 140 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 140 (347)
...|...+.||.|..++||+|. .+.++.||||++.-+. +-+.+.+|+..|+.++||||++++..|..+..+|+||+
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 3567777889999999999999 6788999999996543 34678899999999999999999999999999999999
Q ss_pred ecCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcc
Q 040826 141 FCAAGNLAQHLLRK-DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES 219 (347)
Q Consensus 141 ~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 219 (347)
||.+||+.+.+... ..-+++..+..++++++.||.||| .+|.+|||+|+.||||+.+|.++|+|||.+..+.....
T Consensus 105 fMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH---~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~ 181 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLH---QNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGD 181 (516)
T ss_pred hhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHH---hcCceecccccccEEEcCCCcEEEcCceeeeeecccCc
Confidence 99999999999652 344899999999999999999999 89999999999999999999999999998876543222
Q ss_pred ce---eecccCCCCcccccccc--CCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccC
Q 040826 220 KV---FTDVRGTIGYMDPEYMT--NAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFED 294 (347)
Q Consensus 220 ~~---~~~~~~~~~y~aPE~~~--~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (347)
.. +....|+++|||||++. ...|+.|+||||||++..||.+|..||.... ..+.+.... .+.++... -
T Consensus 182 R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~p-PmkvLl~tL----qn~pp~~~--t 254 (516)
T KOG0582|consen 182 RQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYP-PMKVLLLTL----QNDPPTLL--T 254 (516)
T ss_pred eeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCC-hHHHHHHHh----cCCCCCcc--c
Confidence 21 25568999999999953 3579999999999999999999999997432 222222222 22222111 2
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 295 PRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 295 ~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
..+..+........+.+++..||++||++|||+.++++
T Consensus 255 ~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 255 SGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred ccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 22333334455568999999999999999999999986
No 20
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=2.9e-45 Score=330.61 Aligned_cols=258 Identities=27% Similarity=0.389 Sum_probs=203.0
Q ss_pred hcCcccCCeeeecCCeeEEEEEe------CCCCEEEEEEcccCCC---hhHHHHHHHHhhcC-CCCcceeeeeEEEeC-C
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVL------PSGQVVAIKHIYKSNN---TDSFSREVEGLSRV-RHPNLVCLFGCCVEG-G 133 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~---~~~~~~e~~~l~~l-~h~niv~~~~~~~~~-~ 133 (347)
.++|...+.||+|+||.||+|.. .++..||+|.+..... ...+.+|+.++.++ +||||+++++++... .
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 35678889999999999999973 2356899999875432 34688999999999 899999999988764 4
Q ss_pred eEEEEEeecCCCChHHHhhcCC----------------------------------------------------------
Q 040826 134 EQYLVYEFCAAGNLAQHLLRKD---------------------------------------------------------- 155 (347)
Q Consensus 134 ~~~lv~e~~~~gsL~~~l~~~~---------------------------------------------------------- 155 (347)
..+++|||+++|+|.+++....
T Consensus 86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T cd05102 86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD 165 (338)
T ss_pred ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence 6899999999999999886421
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccc-eeecccCCCCc
Q 040826 156 ---SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK-VFTDVRGTIGY 231 (347)
Q Consensus 156 ---~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~y 231 (347)
..+++..+..++.|+++||.||| +++++||||||+||+++.++.++|+|||+++........ ......++..|
T Consensus 166 ~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y 242 (338)
T cd05102 166 LWKSPLTMEDLICYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKW 242 (338)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccc
Confidence 24778889999999999999999 889999999999999999999999999999865322211 12233456789
Q ss_pred cccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHH
Q 040826 232 MDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESIL 310 (347)
Q Consensus 232 ~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~ 310 (347)
+|||.+.+..++.++||||||+++|+|++ |..||........ .. .....+... . .+....+.+.
T Consensus 243 ~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~-~~---~~~~~~~~~-------~----~~~~~~~~l~ 307 (338)
T cd05102 243 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE-FC---QRLKDGTRM-------R----APENATPEIY 307 (338)
T ss_pred cCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH-HH---HHHhcCCCC-------C----CCCCCCHHHH
Confidence 99999999899999999999999999997 8888875332211 11 111111110 0 1112335799
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 040826 311 KIAVLCVAKSSKGRPTIDVVYEEIDKAWKN 340 (347)
Q Consensus 311 ~l~~~cl~~~p~~Rps~~ei~~~l~~~~~~ 340 (347)
+++.+||+.||.+|||+.++++.|++++++
T Consensus 308 ~li~~cl~~dp~~RPs~~el~~~l~~~~~~ 337 (338)
T cd05102 308 RIMLACWQGDPKERPTFSALVEILGDLLQE 337 (338)
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 999999999999999999999999998764
No 21
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-46 Score=329.85 Aligned_cols=248 Identities=27% Similarity=0.385 Sum_probs=208.0
Q ss_pred cCcccCCeeeecCCeeEEEEE-eCCCCEEEEEEcccCCC--hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeec
Q 040826 66 NNDWDRRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNN--TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFC 142 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 142 (347)
..|..-.+||+|+.|.||.+. ..+++.||+|++..... .+-+.+|+.+|+..+|+|||.+++.|...+..++||||+
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 446677889999999999999 56789999999976544 456889999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcccee
Q 040826 143 AAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVF 222 (347)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 222 (347)
+||+|.|.+.. ..+++.++..+++.+++||+||| .+||+|||||.+|||++.+|.+||+|||.+..+..... ..
T Consensus 353 ~ggsLTDvVt~--~~~~E~qIA~Icre~l~aL~fLH---~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~-KR 426 (550)
T KOG0578|consen 353 EGGSLTDVVTK--TRMTEGQIAAICREILQGLKFLH---ARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS-KR 426 (550)
T ss_pred CCCchhhhhhc--ccccHHHHHHHHHHHHHHHHHHH---hcceeeeccccceeEeccCCcEEEeeeeeeeccccccC-cc
Confidence 99999998844 34899999999999999999999 89999999999999999999999999999998764333 45
Q ss_pred ecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCC
Q 040826 223 TDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNIN 302 (347)
Q Consensus 223 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 302 (347)
...+||+.|||||++....|+.++||||||++++||+.|++||-...+.. .+..+ ...+.+++. -.
T Consensus 427 ~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Plr-AlyLI---a~ng~P~lk----------~~ 492 (550)
T KOG0578|consen 427 STMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR-ALYLI---ATNGTPKLK----------NP 492 (550)
T ss_pred ccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHH-HHHHH---hhcCCCCcC----------Cc
Confidence 66789999999999999999999999999999999999999997432221 11111 112221111 12
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 303 RADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 303 ~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
.....++.+++.+||..|+++|||+.|++++
T Consensus 493 ~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 493 EKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred cccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 2344689999999999999999999999863
No 22
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-46 Score=342.96 Aligned_cols=255 Identities=27% Similarity=0.416 Sum_probs=218.8
Q ss_pred ccCCeeeecCCeeEEEEEeCC----CCEEEEEEcccC---CChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 69 WDRRFLGRGSAGLVYKGVLPS----GQVVAIKHIYKS---NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 69 ~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
...+.||.|.||.|++|.++- ...||||.++.. +...+|+.|..+|-+..||||+++.|+........+|.||
T Consensus 632 ~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEy 711 (996)
T KOG0196|consen 632 KIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEY 711 (996)
T ss_pred EEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhh
Confidence 345789999999999999652 347999999875 3456899999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccce
Q 040826 142 CAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKV 221 (347)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 221 (347)
|++|+|+.+|+++++.+++.++.-++++|+.|+.||. +.+++||||..+|||++.+..+|++|||+++.+.++....
T Consensus 712 MENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLs---dm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~ 788 (996)
T KOG0196|consen 712 MENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLS---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAA 788 (996)
T ss_pred hhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHh---hcCchhhhhhhhheeeccceEEEeccccceeecccCCCcc
Confidence 9999999999999889999999999999999999999 7899999999999999999999999999999876544333
Q ss_pred eec--ccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCC
Q 040826 222 FTD--VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLN 298 (347)
Q Consensus 222 ~~~--~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 298 (347)
.+. -.-+.+|.|||.+...+++.+|||||+|+++||.++ |.+|+= ++...+-+..+.++.+..
T Consensus 789 ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYW-dmSNQdVIkaIe~gyRLP------------- 854 (996)
T KOG0196|consen 789 YTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYW-DMSNQDVIKAIEQGYRLP------------- 854 (996)
T ss_pred ccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCccc-ccchHHHHHHHHhccCCC-------------
Confidence 222 234679999999999999999999999999999876 777763 444455555555554433
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhh
Q 040826 299 GNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWKNTM 342 (347)
Q Consensus 299 ~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~~~~ 342 (347)
-+.+|+..|++||++||++|..+||.+.+|+..|++++++..
T Consensus 855 --pPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~ 896 (996)
T KOG0196|consen 855 --PPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPN 896 (996)
T ss_pred --CCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCch
Confidence 334778899999999999999999999999999999998754
No 23
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-45 Score=355.26 Aligned_cols=256 Identities=25% Similarity=0.388 Sum_probs=214.1
Q ss_pred ccCCeeeecCCeeEEEEEeC--CCC----EEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEE
Q 040826 69 WDRRFLGRGSAGLVYKGVLP--SGQ----VVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVY 139 (347)
Q Consensus 69 ~~~~~lg~G~~g~V~~~~~~--~~~----~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 139 (347)
...+.||+|+||.||.|... .|. .||+|.+.+... ..+|.+|..+|+.++||||++++|++.+....++++
T Consensus 695 ~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~l 774 (1025)
T KOG1095|consen 695 TLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILL 774 (1025)
T ss_pred EeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEe
Confidence 34577999999999999954 243 499999987654 347999999999999999999999999999999999
Q ss_pred eecCCCChHHHhhcC------CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeeccccee
Q 040826 140 EFCAAGNLAQHLLRK------DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKM 213 (347)
Q Consensus 140 e~~~~gsL~~~l~~~------~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~ 213 (347)
|||++|+|..++++. ...++....+.++.|+|+|+.||+ ++++|||||..+|+|+++...+||+|||+|+.
T Consensus 775 eyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe---~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArD 851 (1025)
T KOG1095|consen 775 EYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLE---SKHFVHRDLAARNCLLDERRVVKIADFGLARD 851 (1025)
T ss_pred hhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHH---hCCCcCcchhhhheeecccCcEEEcccchhHh
Confidence 999999999999876 677999999999999999999999 88999999999999999999999999999995
Q ss_pred cCCCccceeecc-cCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccc
Q 040826 214 LGMEESKVFTDV-RGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDF 292 (347)
Q Consensus 214 ~~~~~~~~~~~~-~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (347)
+...+....... .-+..|||||.+....++.++|||||||++||++|...+++......+-+..+...-+.
T Consensus 852 iy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL-------- 923 (1025)
T KOG1095|consen 852 IYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRL-------- 923 (1025)
T ss_pred hhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCcc--------
Confidence 443333333322 45679999999999999999999999999999999665555454444444433333211
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhh
Q 040826 293 EDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWKNTM 342 (347)
Q Consensus 293 ~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~~~~ 342 (347)
+.+..|++.+++||.+||+.+|++||++..|+++++++.++..
T Consensus 924 -------~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~ 966 (1025)
T KOG1095|consen 924 -------DPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAAL 966 (1025)
T ss_pred -------CCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhc
Confidence 3344677899999999999999999999999999999976654
No 24
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=2.2e-44 Score=314.08 Aligned_cols=253 Identities=23% Similarity=0.307 Sum_probs=203.1
Q ss_pred cCcccCCeeeecCCeeEEEEEeC----CCCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP----SGQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLV 138 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 138 (347)
++|...+.||+|+||.||+|.++ .+..||+|.+..... ...+.+|+..+++++||||+++++++..++..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 45677888999999999999853 356899999876533 24688999999999999999999999999999999
Q ss_pred EeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCc
Q 040826 139 YEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE 218 (347)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 218 (347)
|||+++|+|.+++......+++..++.++.|++.||+||| +.+++|+||||+||+++.++.++++|||.+.......
T Consensus 85 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH---~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~ 161 (266)
T cd05064 85 TEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLS---EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA 161 (266)
T ss_pred EEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeeccccHhhEEEcCCCcEEECCCcccccccccc
Confidence 9999999999999776667899999999999999999999 8899999999999999999999999999876532221
Q ss_pred cceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCC
Q 040826 219 SKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRL 297 (347)
Q Consensus 219 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 297 (347)
........++..|+|||.+.+..++.++||||||+++|++++ |..||...... +. ...+..+...
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~-~~----~~~~~~~~~~--------- 227 (266)
T cd05064 162 IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ-DV----IKAVEDGFRL--------- 227 (266)
T ss_pred hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH-HH----HHHHHCCCCC---------
Confidence 111112235678999999999999999999999999999875 99888643221 11 1111111110
Q ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 040826 298 NGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKA 337 (347)
Q Consensus 298 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~ 337 (347)
..+..++..+.+++.+||+.+|.+|||+.+|.+.|+++
T Consensus 228 --~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 228 --PAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred --CCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 11122345799999999999999999999999999875
No 25
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1e-44 Score=299.02 Aligned_cols=234 Identities=25% Similarity=0.312 Sum_probs=202.4
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC-----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN-----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVY 139 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 139 (347)
.+|...+.||.|+||.|.+++.+ +|..+|+|++.+.. ..+...+|..+|+.+.||.++++++.+.+.+..++||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 45667788999999999999954 68899999997753 3456788999999999999999999999999999999
Q ss_pred eecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcc
Q 040826 140 EFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES 219 (347)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 219 (347)
||.+||.|..++++.+ .+++..++-+++|++.|++||| +.+|++|||||+|||+|.+|.+||+|||.+......
T Consensus 124 eyv~GGElFS~Lrk~~-rF~e~~arFYAAeivlAleylH---~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r-- 197 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKSG-RFSEPHARFYAAEIVLALEYLH---SLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR-- 197 (355)
T ss_pred eccCCccHHHHHHhcC-CCCchhHHHHHHHHHHHHHHHH---hcCeeeccCChHHeeeccCCcEEEEeccceEEecCc--
Confidence 9999999999996654 5999999999999999999999 899999999999999999999999999999986422
Q ss_pred ceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCC
Q 040826 220 KVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNG 299 (347)
Q Consensus 220 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 299 (347)
+-..+||+.|+|||.++..+|+.++|.||||+++|||+.|.+||..... ...-..+..+....+..++
T Consensus 198 --T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~-----~~iY~KI~~~~v~fP~~fs----- 265 (355)
T KOG0616|consen 198 --TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP-----IQIYEKILEGKVKFPSYFS----- 265 (355)
T ss_pred --EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh-----HHHHHHHHhCcccCCcccC-----
Confidence 4567899999999999999999999999999999999999999986544 2334445555554444433
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCC
Q 040826 300 NINRADFESILKIAVLCVAKSSKGR 324 (347)
Q Consensus 300 ~~~~~~~~~l~~l~~~cl~~~p~~R 324 (347)
.++.+|+...|+.|-++|
T Consensus 266 -------~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 266 -------SDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred -------HHHHHHHHHHHhhhhHhh
Confidence 468888999999999888
No 26
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=6.1e-44 Score=309.52 Aligned_cols=250 Identities=25% Similarity=0.415 Sum_probs=203.4
Q ss_pred cCcccCCeeeecCCeeEEEEEeCCCCEEEEEEcccCC-ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCC
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAA 144 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 144 (347)
++|...+.||+|+||.||++.++++..+++|.+.... ....+.+|+..+++++||||+++++++.+.+..+++|||+++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~ 83 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMEN 83 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCC
Confidence 3466678899999999999998888899999886543 356788999999999999999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeec
Q 040826 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD 224 (347)
Q Consensus 145 gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 224 (347)
|+|.+++......+++..+..++.|++.||.||| +.+++|+||+|+||++++++.++++|||.+.............
T Consensus 84 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~ 160 (256)
T cd05114 84 GCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLE---RNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSG 160 (256)
T ss_pred CcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCC
Confidence 9999998765556899999999999999999999 8899999999999999999999999999988654322222223
Q ss_pred ccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCH
Q 040826 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINR 303 (347)
Q Consensus 225 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 303 (347)
..++..|+|||.+.+..++.++|+||||+++|+|++ |+.||..... .+... .+..+.... .+.
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~-~~~~~----~i~~~~~~~----~~~------- 224 (256)
T cd05114 161 AKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN-YEVVE----MISRGFRLY----RPK------- 224 (256)
T ss_pred CCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH-HHHHH----HHHCCCCCC----CCC-------
Confidence 345678999999988889999999999999999999 8888864321 11112 222221110 111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 040826 304 ADFESILKIAVLCVAKSSKGRPTIDVVYEEI 334 (347)
Q Consensus 304 ~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l 334 (347)
....++.+++.+||+.+|++|||+.++++.|
T Consensus 225 ~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 225 LASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred CCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 1225799999999999999999999999876
No 27
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2e-43 Score=310.49 Aligned_cols=259 Identities=19% Similarity=0.320 Sum_probs=204.7
Q ss_pred CcccccHHHHHHHhcCcccCCeeeecCCeeEEEEEeCCCCEEEEEEcccCCC-----hhHHHHHHHHhhcCCCCcceeee
Q 040826 52 GLYRFSKDEIENAINNDWDRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNN-----TDSFSREVEGLSRVRHPNLVCLF 126 (347)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~h~niv~~~ 126 (347)
++..++.+++ +......+|+|++|.||+|.+ +|+.||+|.+..... .+.+.+|+.++++++||||++++
T Consensus 11 ~~~~i~~~~i-----~~~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~ 84 (283)
T PHA02988 11 DIKCIESDDI-----DKYTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIY 84 (283)
T ss_pred cceecCHHHc-----CCCCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 3455555555 222335799999999999998 689999999876432 24577999999999999999999
Q ss_pred eEEEe----CCeEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCc
Q 040826 127 GCCVE----GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLE 202 (347)
Q Consensus 127 ~~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~ 202 (347)
+++.+ ....+++|||+++|+|.+++... ..+++....+++.|++.|+.|||+ ..+++||||||+||++++++.
T Consensus 85 g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lH~--~~~~~Hrdlkp~nill~~~~~ 161 (283)
T PHA02988 85 GFIIDIVDDLPRLSLILEYCTRGYLREVLDKE-KDLSFKTKLDMAIDCCKGLYNLYK--YTNKPYKNLTSVSFLVTENYK 161 (283)
T ss_pred eeEEecccCCCceEEEEEeCCCCcHHHHHhhC-CCCChhHHHHHHHHHHHHHHHHHh--cCCCCCCcCChhhEEECCCCc
Confidence 99876 34789999999999999998654 468899999999999999999994 248889999999999999999
Q ss_pred eEEeecccceecCCCccceeecccCCCCccccccccC--CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHh
Q 040826 203 PKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN--AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280 (347)
Q Consensus 203 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~ 280 (347)
+||+|||++....... ....++..|+|||.+.+ ..++.++||||||+++|+|++|+.||..... .+.......
T Consensus 162 ~kl~dfg~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~-~~~~~~i~~ 236 (283)
T PHA02988 162 LKIICHGLEKILSSPP----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT-KEIYDLIIN 236 (283)
T ss_pred EEEcccchHhhhcccc----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH-HHHHHHHHh
Confidence 9999999988653221 22357889999999976 6789999999999999999999999974322 111111111
Q ss_pred hhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 040826 281 DVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAW 338 (347)
Q Consensus 281 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~ 338 (347)
. +... ..+..+.+++.+++.+||+.||++|||+.++++.|+.+.
T Consensus 237 ~---~~~~-----------~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 237 K---NNSL-----------KLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred c---CCCC-----------CCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 1 1110 111134467999999999999999999999999999874
No 28
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-45 Score=327.05 Aligned_cols=241 Identities=27% Similarity=0.446 Sum_probs=202.7
Q ss_pred cCCeeeecCCeeEEEEEeCCCCEEEEEEcccCCChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCCCChHH
Q 040826 70 DRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQ 149 (347)
Q Consensus 70 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~ 149 (347)
..+-||.|+.|-||+|++ .++.||||++..-.+ .++..|++|+|+||+.+.|+|.....+|+|||||..|.|..
T Consensus 128 ELeWlGSGaQGAVF~Grl-~netVAVKKV~elkE-----TdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~ 201 (904)
T KOG4721|consen 128 ELEWLGSGAQGAVFLGRL-HNETVAVKKVRELKE-----TDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYE 201 (904)
T ss_pred hhhhhccCcccceeeeec-cCceehhHHHhhhhh-----hhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHH
Confidence 345699999999999999 468899998854332 47889999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeecccCCC
Q 040826 150 HLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTI 229 (347)
Q Consensus 150 ~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~ 229 (347)
.|+. +..+.......|..+||.|+.||| .+.|||||||.-||||+.+..+||+|||.++..... ...-.+.||.
T Consensus 202 VLka-~~~itp~llv~Wsk~IA~GM~YLH---~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~--STkMSFaGTV 275 (904)
T KOG4721|consen 202 VLKA-GRPITPSLLVDWSKGIAGGMNYLH---LHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK--STKMSFAGTV 275 (904)
T ss_pred HHhc-cCccCHHHHHHHHHHhhhhhHHHH---HhhHhhhccCCCceEeeccceEEeccccchHhhhhh--hhhhhhhhhH
Confidence 8855 456888999999999999999999 788999999999999999999999999999876432 2233478999
Q ss_pred CccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHHHH
Q 040826 230 GYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESI 309 (347)
Q Consensus 230 ~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l 309 (347)
.|||||++.+.+.+.|+|||||||+|||||||..|+.. .++ ..+...+ -...|...++..+++-+
T Consensus 276 aWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkd----Vds-sAIIwGV----------GsNsL~LpvPstcP~Gf 340 (904)
T KOG4721|consen 276 AWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKD----VDS-SAIIWGV----------GSNSLHLPVPSTCPDGF 340 (904)
T ss_pred hhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccc----cch-heeEEec----------cCCcccccCcccCchHH
Confidence 99999999999999999999999999999999999862 111 1111111 12233345566777889
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 040826 310 LKIAVLCVAKSSKGRPTIDVVYEEIDKA 337 (347)
Q Consensus 310 ~~l~~~cl~~~p~~Rps~~ei~~~l~~~ 337 (347)
.-|+++||+..|.+|||+.+|+.+|+-.
T Consensus 341 klL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 341 KLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred HHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 9999999999999999999999999754
No 29
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-44 Score=318.19 Aligned_cols=259 Identities=22% Similarity=0.312 Sum_probs=212.3
Q ss_pred CcccCCeeeecCCeeEEEEEeCCCCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecC
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCA 143 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 143 (347)
.....++||+|-||.|.+|...++..||||+++.... ..+|.+|+.+|.+++||||++++|+|..++.+++++||++
T Consensus 539 ~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmE 618 (807)
T KOG1094|consen 539 RLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYME 618 (807)
T ss_pred heehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHh
Confidence 3445688999999999999998889999999988654 3589999999999999999999999999999999999999
Q ss_pred CCChHHHhhcCCCC-CCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccce-
Q 040826 144 AGNLAQHLLRKDSV-LTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKV- 221 (347)
Q Consensus 144 ~gsL~~~l~~~~~~-~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~- 221 (347)
+|+|.+++..+..+ +.......|+.||+.|++||. +.+++||||.+.|+|++.++++||+|||+++.+-..++..
T Consensus 619 nGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLe---s~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~v 695 (807)
T KOG1094|consen 619 NGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLE---SLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRV 695 (807)
T ss_pred cCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHH---hhchhhccccccceeecCcccEEecCcccccccccCCceee
Confidence 99999999776433 355667789999999999999 8899999999999999999999999999999654444443
Q ss_pred eecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh--CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCC
Q 040826 222 FTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS--GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNG 299 (347)
Q Consensus 222 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 299 (347)
....+-+.+|||||.+..++++.++|+|+||+++||+++ ...|+.. ..+++..+-............-+
T Consensus 696 qgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~--lt~e~vven~~~~~~~~~~~~~l------- 766 (807)
T KOG1094|consen 696 QGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQ--LTDEQVVENAGEFFRDQGRQVVL------- 766 (807)
T ss_pred ecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhh--hhHHHHHHhhhhhcCCCCcceec-------
Confidence 334567899999999999999999999999999999865 5666652 22333344333333333221111
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 040826 300 NINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKA 337 (347)
Q Consensus 300 ~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~ 337 (347)
..+..|+..+++|+.+||..+..+|||++++...|++.
T Consensus 767 ~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 767 SRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred cCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 23345667899999999999999999999999998764
No 30
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-45 Score=328.22 Aligned_cols=260 Identities=26% Similarity=0.399 Sum_probs=210.1
Q ss_pred HHHHhcCcccCCeeeecCCeeEEEEEeC--CC--CE-EEEEEcccCC-----ChhHHHHHHHHhhcCCCCcceeeeeEEE
Q 040826 61 IENAINNDWDRRFLGRGSAGLVYKGVLP--SG--QV-VAIKHIYKSN-----NTDSFSREVEGLSRVRHPNLVCLFGCCV 130 (347)
Q Consensus 61 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~--~~-vavK~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~ 130 (347)
++-..++....++||+|+||.||+|.+. ++ .. ||+|...... ...++.+|.++|+.++||||++++|++.
T Consensus 152 Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~ 231 (474)
T KOG0194|consen 152 WELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAV 231 (474)
T ss_pred cEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 3333455555688999999999999954 22 23 8999887522 2347999999999999999999999999
Q ss_pred eCCeEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeeccc
Q 040826 131 EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGL 210 (347)
Q Consensus 131 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~ 210 (347)
....+++|||+|+||+|.++|...+..++..+...++.+.|.||+||| +++++||||..+|+|++.++.+||+|||+
T Consensus 232 ~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh---~k~~IHRDIAARNcL~~~~~~vKISDFGL 308 (474)
T KOG0194|consen 232 LEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLH---SKNCIHRDIAARNCLYSKKGVVKISDFGL 308 (474)
T ss_pred CCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHH---HCCCcchhHhHHHheecCCCeEEeCcccc
Confidence 999999999999999999999888778999999999999999999999 88999999999999999999999999999
Q ss_pred ceecCCCccceee-cccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhh-cCCCC
Q 040826 211 AKMLGMEESKVFT-DVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDV-SMGKR 287 (347)
Q Consensus 211 ~~~~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~-~~~~~ 287 (347)
++... ...... ...-+..|+|||.+....|+.++||||||+++||+++ |..|+..-... .....+ ..+-+
T Consensus 309 s~~~~--~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~-----~v~~kI~~~~~r 381 (474)
T KOG0194|consen 309 SRAGS--QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY-----EVKAKIVKNGYR 381 (474)
T ss_pred ccCCc--ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH-----HHHHHHHhcCcc
Confidence 88642 111122 2246789999999999999999999999999999999 77777643222 122222 11111
Q ss_pred CcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 040826 288 PIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWKNT 341 (347)
Q Consensus 288 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~~~ 341 (347)
. ..+...+.++..++.+||..+|++||||.++.+.++.+....
T Consensus 382 ~-----------~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~ 424 (474)
T KOG0194|consen 382 M-----------PIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKK 424 (474)
T ss_pred C-----------CCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcc
Confidence 1 222244578999999999999999999999999999997653
No 31
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=2.1e-43 Score=313.85 Aligned_cols=258 Identities=22% Similarity=0.330 Sum_probs=198.6
Q ss_pred cCcccCCeeeecCCeeEEEEEeCC-----------------CCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceee
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLPS-----------------GQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCL 125 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~~-----------------~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~ 125 (347)
++|...+.||+|+||.||+|.+.+ +..||+|.+..... ...+.+|+.++.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 467778899999999999997532 33699998876433 2468899999999999999999
Q ss_pred eeEEEeCCeEEEEEeecCCCChHHHhhcCC------------------CCCCHHHHHHHHHHHHHHHHHhhhccCCCcee
Q 040826 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKD------------------SVLTWERRVKILRDCALALRYLHHYIDGCIVH 187 (347)
Q Consensus 126 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~------------------~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H 187 (347)
++++.+.+..+++|||+++|+|.+++.... ..+++..++.++.|++.||.||| +.+++|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~ivH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS---SLNFVH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH---HCCccc
Confidence 999999999999999999999999885321 24678889999999999999999 789999
Q ss_pred CCCCCCCEEecCCCceEEeecccceecCCCccc-eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhC--CCC
Q 040826 188 RDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK-VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG--QKV 264 (347)
Q Consensus 188 ~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg--~~p 264 (347)
+||||+||++++++.+||+|||++......... ......++..|+|||.+.+..++.++||||||+++|+|+++ ..|
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p 241 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQP 241 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCC
Confidence 999999999999999999999999865432221 12234457889999999888899999999999999999974 455
Q ss_pred cCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 040826 265 IELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEID 335 (347)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~ 335 (347)
+.... ..+.................. ..+..++..+.+++.+||+.+|.+|||+.+|.+.|+
T Consensus 242 ~~~~~-~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 242 YGELT-DEQVIENAGEFFRDQGRQVYL--------FRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCcCC-HHHHHHHHHHHhhhccccccc--------cCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 54321 122222111111111111100 011123467999999999999999999999998876
No 32
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.6e-44 Score=324.98 Aligned_cols=243 Identities=26% Similarity=0.362 Sum_probs=209.3
Q ss_pred cccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC-----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 68 DWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN-----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
|...+-||.|+.|.|-+|+. .+|+.+|||.+.+.. ....+.+|+-+|+-+.|||++.+++++++...+|+|.||
T Consensus 14 wkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEy 93 (786)
T KOG0588|consen 14 WKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEY 93 (786)
T ss_pred eeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEe
Confidence 34456799999999999994 589999999997652 234678999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccce
Q 040826 142 CAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKV 221 (347)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 221 (347)
+++|.|++++..++. +++.++.++++||+.|+.|+| ..+|+||||||+|+|+|..+++||+|||+|..- .....
T Consensus 94 v~gGELFdylv~kG~-l~e~eaa~ff~QIi~gv~yCH---~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe--~~gkl 167 (786)
T KOG0588|consen 94 VPGGELFDYLVRKGP-LPEREAAHFFRQILDGVSYCH---AFNICHRDLKPENLLLDVKNNIKIADFGMASLE--VPGKL 167 (786)
T ss_pred cCCchhHHHHHhhCC-CCCHHHHHHHHHHHHHHHHHh---hhcceeccCCchhhhhhcccCEeeeccceeecc--cCCcc
Confidence 999999999977655 889999999999999999999 889999999999999999999999999999874 34455
Q ss_pred eecccCCCCccccccccCCccC-CcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCC
Q 040826 222 FTDVRGTIGYMDPEYMTNAKLT-CASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGN 300 (347)
Q Consensus 222 ~~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 300 (347)
....+|++.|.+||++.|.+|. .++||||.|+|||.||||+.||. ++.+......+..|...++.++
T Consensus 168 LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFd-----DdNir~LLlKV~~G~f~MPs~I------- 235 (786)
T KOG0588|consen 168 LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFD-----DDNIRVLLLKVQRGVFEMPSNI------- 235 (786)
T ss_pred ccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCC-----CccHHHHHHHHHcCcccCCCcC-------
Confidence 6777899999999999999875 79999999999999999999998 3444445555555554444322
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 301 INRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 301 ~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
..+..+|+.+|+..||..|.|++||+++
T Consensus 236 -----s~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 236 -----SSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred -----CHHHHHHHHHHhccCccccccHHHHhhC
Confidence 2468999999999999999999999975
No 33
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=2.1e-44 Score=319.98 Aligned_cols=244 Identities=30% Similarity=0.391 Sum_probs=211.6
Q ss_pred cCcccCCeeeecCCeeEEEEE-eCCCCEEEEEEcccCCCh----hHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEe
Q 040826 66 NNDWDRRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNT----DSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYE 140 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~----~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 140 (347)
++|...+.||+|.||.||||+ ..+.+.||+|.+.+.... ..+.+|++++++++||||+.++++|++..+.++|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 456666789999999999999 447899999999765432 368899999999999999999999999999999999
Q ss_pred ecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccc
Q 040826 141 FCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220 (347)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 220 (347)
|+.| +|..++.+.+ .++++.+..++.|+..||.||| +.+|.|||+||.|||++.+|.+|+||||+++.+.. ...
T Consensus 82 ~a~g-~L~~il~~d~-~lpEe~v~~~a~~LVsaL~yLh---s~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~-~t~ 155 (808)
T KOG0597|consen 82 YAVG-DLFTILEQDG-KLPEEQVRAIAYDLVSALYYLH---SNRILHRDMKPQNILLEKGGTLKLCDFGLARAMST-NTS 155 (808)
T ss_pred hhhh-hHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHH---hcCcccccCCcceeeecCCCceeechhhhhhhccc-Cce
Confidence 9988 9999886654 5999999999999999999999 89999999999999999999999999999998753 333
Q ss_pred eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCC
Q 040826 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGN 300 (347)
Q Consensus 221 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 300 (347)
..+...||+-|||||.+.+.+|+..+|.||+||++||+.+|++||. ...+....+.+...+.+.+.
T Consensus 156 vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~-----a~si~~Lv~~I~~d~v~~p~--------- 221 (808)
T KOG0597|consen 156 VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFY-----ARSITQLVKSILKDPVKPPS--------- 221 (808)
T ss_pred eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCch-----HHHHHHHHHHHhcCCCCCcc---------
Confidence 4566789999999999999999999999999999999999999998 55666666666655443222
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 301 INRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 301 ~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
........++...|.+||..|.|..+++.
T Consensus 222 ---~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 222 ---TASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred ---cccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 34467899999999999999999998875
No 34
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.7e-43 Score=322.88 Aligned_cols=255 Identities=27% Similarity=0.403 Sum_probs=200.7
Q ss_pred hcCcccCCeeeecCCeeEEEEEe------CCCCEEEEEEcccCCC---hhHHHHHHHHhhcC-CCCcceeeeeEEEeCCe
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVL------PSGQVVAIKHIYKSNN---TDSFSREVEGLSRV-RHPNLVCLFGCCVEGGE 134 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~---~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 134 (347)
.++|...+.||+|+||.||+|.. .++..||+|++..... .+.+.+|+.+++.+ +||||+++++++...+.
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 34677789999999999999973 2456899999875432 34688999999999 89999999999999999
Q ss_pred EEEEEeecCCCChHHHhhcCC-----------------------------------------------------------
Q 040826 135 QYLVYEFCAAGNLAQHLLRKD----------------------------------------------------------- 155 (347)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~~----------------------------------------------------------- 155 (347)
.++||||+++|+|.+++....
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 999999999999999885421
Q ss_pred ---------------CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccc
Q 040826 156 ---------------SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220 (347)
Q Consensus 156 ---------------~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 220 (347)
..+++..+.+++.|++.||.||| +.+++||||||+||++++++.++|+|||++.........
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence 24678889999999999999999 889999999999999999999999999999865432221
Q ss_pred e-eecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCC
Q 040826 221 V-FTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLN 298 (347)
Q Consensus 221 ~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 298 (347)
. .....++..|+|||.+.+..++.++||||||+++|+|++ |..||....... ....... .+.... .+
T Consensus 271 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~-~~~~~~~---~~~~~~----~~--- 339 (375)
T cd05104 271 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS-KFYKMIK---EGYRML----SP--- 339 (375)
T ss_pred cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH-HHHHHHH---hCccCC----CC---
Confidence 1 122335678999999999999999999999999999998 777775432221 1111111 111110 01
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 040826 299 GNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKA 337 (347)
Q Consensus 299 ~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~ 337 (347)
.....++.+++.+||+.||++|||+.+|++.|++.
T Consensus 340 ----~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 340 ----ECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred ----CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 11235799999999999999999999999999874
No 35
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.7e-44 Score=287.45 Aligned_cols=246 Identities=26% Similarity=0.376 Sum_probs=208.8
Q ss_pred hcCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccC-----CChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEE
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKS-----NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLV 138 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 138 (347)
.++|...++||+|-||.||.|+. +++-.||+|++.++ ....++.+|+++-..|+||||+++++++.+....||+
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 45677889999999999999994 57889999999765 3345788999999999999999999999999999999
Q ss_pred EeecCCCChHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCC
Q 040826 139 YEFCAAGNLAQHLLR-KDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217 (347)
Q Consensus 139 ~e~~~~gsL~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 217 (347)
+||...|++...+.. ....+++...+.+..|+|.|+.|+| .++++||||||+|+|++..+.+|++|||.+...
T Consensus 101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h---~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~--- 174 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCH---LKRVIHRDIKPENLLLGSAGELKIADFGWSVHA--- 174 (281)
T ss_pred EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhc---cCCcccCCCCHHHhccCCCCCeeccCCCceeec---
Confidence 999999999999974 3456999999999999999999999 899999999999999999999999999998863
Q ss_pred ccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCC
Q 040826 218 ESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRL 297 (347)
Q Consensus 218 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 297 (347)
+.......+||..|.|||...+..++..+|+|++|++.||++.|.+||.... ..+.+. .+..-+..++
T Consensus 175 p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~-~~etYk----rI~k~~~~~p------- 242 (281)
T KOG0580|consen 175 PSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS-HSETYK----RIRKVDLKFP------- 242 (281)
T ss_pred CCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh-hHHHHH----HHHHccccCC-------
Confidence 3455667789999999999999999999999999999999999999998544 222222 2222221111
Q ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 298 NGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 298 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
..++ ....+++.+|+.++|.+|.+..|+.+.
T Consensus 243 -~~is----~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 243 -STIS----GGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred -cccC----hhHHHHHHHHhccCccccccHHHHhhh
Confidence 1222 468999999999999999999999865
No 36
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2.6e-43 Score=310.40 Aligned_cols=248 Identities=24% Similarity=0.288 Sum_probs=199.4
Q ss_pred cccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC-----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 68 DWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN-----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
|...+.||+|+||.||++.. .+|+.||+|.+.... ....+.+|+.++++++|+|++++++++.+++..++++||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 55668899999999999995 578999999886432 223577899999999999999999999999999999999
Q ss_pred cCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccc
Q 040826 142 CAAGNLAQHLLRK-DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220 (347)
Q Consensus 142 ~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 220 (347)
+++|+|.+++... ...+++..+..++.|++.||.||| +.+++||||||+||++++++.++|+|||++..... ..
T Consensus 82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~--~~ 156 (285)
T cd05631 82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQ---RERIVYRDLKPENILLDDRGHIRISDLGLAVQIPE--GE 156 (285)
T ss_pred cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCC--CC
Confidence 9999999887543 346899999999999999999999 88999999999999999999999999999987532 12
Q ss_pred eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCC
Q 040826 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGN 300 (347)
Q Consensus 221 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 300 (347)
......|+..|+|||.+.+..++.++||||||+++|+|++|+.||........ ............. .
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~------------~ 223 (285)
T cd05631 157 TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK-REEVDRRVKEDQE------------E 223 (285)
T ss_pred eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh-HHHHHHHhhcccc------------c
Confidence 23345689999999999999999999999999999999999999975432111 1111111111110 1
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHHH
Q 040826 301 INRADFESILKIAVLCVAKSSKGRPT-----IDVVYEE 333 (347)
Q Consensus 301 ~~~~~~~~l~~l~~~cl~~~p~~Rps-----~~ei~~~ 333 (347)
+......++.+|+.+||+.||.+||+ ++++++.
T Consensus 224 ~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 224 YSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred CCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 12223457899999999999999997 7777763
No 37
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-44 Score=289.47 Aligned_cols=260 Identities=23% Similarity=0.334 Sum_probs=207.5
Q ss_pred hcCcccCCeeeecCCeeEEEEE-eCCCCEEEEEEcccCC--ChhHHHHHHHHhhcCCCCcceeeeeEEEe-----CCeEE
Q 040826 65 INNDWDRRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSN--NTDSFSREVEGLSRVRHPNLVCLFGCCVE-----GGEQY 136 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~-----~~~~~ 136 (347)
.++|+..+.||+|||+-||++. ..++..+|+|++.... +.+...+|++..++++|||+++++++... ....|
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y 99 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY 99 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence 4678889999999999999999 6688999999997654 45578899999999999999999987653 33589
Q ss_pred EEEeecCCCChHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeeccccee
Q 040826 137 LVYEFCAAGNLAQHLLR---KDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKM 213 (347)
Q Consensus 137 lv~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~ 213 (347)
++++|...|||.+.+.. ++..+++.+.+.|+.++++||.+||.. ..+++||||||.||++.+.+.+++.|||.+..
T Consensus 100 ll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~ 178 (302)
T KOG2345|consen 100 LLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSATQ 178 (302)
T ss_pred EEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCccc
Confidence 99999999999999854 566899999999999999999999943 23499999999999999999999999999886
Q ss_pred cCCCcc--------ceeecccCCCCcccccccc---CCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhh
Q 040826 214 LGMEES--------KVFTDVRGTIGYMDPEYMT---NAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDV 282 (347)
Q Consensus 214 ~~~~~~--------~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~ 282 (347)
..-.-. ........|..|.|||.+. +...+.++|||||||+||.|+.|..||.....
T Consensus 179 a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~------------ 246 (302)
T KOG2345|consen 179 APIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ------------ 246 (302)
T ss_pred cceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh------------
Confidence 531111 0111234689999999884 56788999999999999999999999973222
Q ss_pred cCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 040826 283 SMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAW 338 (347)
Q Consensus 283 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~ 338 (347)
+|..-.....++.+..+-....++.+.+++.+|++.||.+||++.+++..+++++
T Consensus 247 -~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 247 -QGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred -cCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 1211111222222222222235688999999999999999999999999999874
No 38
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=4.8e-43 Score=304.76 Aligned_cols=253 Identities=24% Similarity=0.376 Sum_probs=205.4
Q ss_pred hcCcccCCeeeecCCeeEEEEEeCCCCEEEEEEcccCC-ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecC
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCA 143 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 143 (347)
.++|...+.||+|++|.||+|...+++.|++|.+.... ....+.+|+..+++++|||++++++++...+..+++|||++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 84 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMK 84 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeeccc
Confidence 34577788999999999999998778889999987543 34678899999999999999999999999999999999999
Q ss_pred CCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcccee
Q 040826 144 AGNLAQHLLRKD-SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVF 222 (347)
Q Consensus 144 ~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 222 (347)
+++|.+++.... ..+++..+..++.|++.|+.+|| +.+++|+||+|+||++++++.++|+|||++...........
T Consensus 85 ~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 161 (261)
T cd05068 85 YGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLE---AQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAR 161 (261)
T ss_pred CCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCccccc
Confidence 999999986543 56899999999999999999999 78999999999999999999999999999987652222222
Q ss_pred ecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCC
Q 040826 223 TDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNI 301 (347)
Q Consensus 223 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 301 (347)
.....+..|+|||.+.+..++.++|+||||+++|+|++ |+.||...... ..... +...... ..
T Consensus 162 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-~~~~~----~~~~~~~-----------~~ 225 (261)
T cd05068 162 EGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA-EVLQQ----VDQGYRM-----------PC 225 (261)
T ss_pred CCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH-HHHHH----HHcCCCC-----------CC
Confidence 22233568999999998889999999999999999999 88887643211 11111 1111100 01
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 040826 302 NRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDK 336 (347)
Q Consensus 302 ~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~ 336 (347)
.....+.+.+++.+||+.+|.+||++.++++.|++
T Consensus 226 ~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 226 PPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred CCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 11233679999999999999999999999999986
No 39
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=3.4e-43 Score=304.86 Aligned_cols=250 Identities=25% Similarity=0.380 Sum_probs=202.7
Q ss_pred CcccCCeeeecCCeeEEEEEeCCCCEEEEEEcccCC-ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCCC
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 145 (347)
+|...+.||+|+||.||++...++..+|+|.+.... ....+.+|+..+++++||||+++++++......+++|||+.++
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (256)
T cd05113 5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNG 84 (256)
T ss_pred HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCC
Confidence 466678899999999999998777789999887543 3457899999999999999999999999888899999999999
Q ss_pred ChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeecc
Q 040826 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDV 225 (347)
Q Consensus 146 sL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 225 (347)
+|.+++......+++..++.++.|++.||.||| +.+++|+||+|+||++++++.++|+|||.+..............
T Consensus 85 ~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~ 161 (256)
T cd05113 85 CLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLE---SKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGS 161 (256)
T ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCCEEECCCccceecCCCceeecCCC
Confidence 999999765557899999999999999999999 88999999999999999999999999999886543322222233
Q ss_pred cCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHH
Q 040826 226 RGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRA 304 (347)
Q Consensus 226 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 304 (347)
.++..|+|||...+..++.++|+||||+++|+|++ |..||..... ...... ...+.... ....
T Consensus 162 ~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~-~~~~~~----~~~~~~~~-----------~~~~ 225 (256)
T cd05113 162 KFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNN-SETVEK----VSQGLRLY-----------RPHL 225 (256)
T ss_pred ccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCH-HHHHHH----HhcCCCCC-----------CCCC
Confidence 45678999999988889999999999999999998 8888763322 111111 11111110 0001
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 040826 305 DFESILKIAVLCVAKSSKGRPTIDVVYEEID 335 (347)
Q Consensus 305 ~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~ 335 (347)
..+.+.+++.+||+.+|++|||+.+|++.|+
T Consensus 226 ~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 226 ASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 2367999999999999999999999998764
No 40
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=2.5e-43 Score=306.48 Aligned_cols=252 Identities=24% Similarity=0.403 Sum_probs=205.2
Q ss_pred cCcccCCeeeecCCeeEEEEEeCCCCEEEEEEcccCC-ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCC
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAA 144 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 144 (347)
++|...++||+|+||.||+|...++..|++|.+.... ..+.+.+|+.++++++|+|++++++.+...+..++++||+++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 85 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAK 85 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCC
Confidence 5677789999999999999998888899999886543 346788999999999999999999999998999999999999
Q ss_pred CChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceee
Q 040826 145 GNLAQHLLRK-DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT 223 (347)
Q Consensus 145 gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 223 (347)
++|.+++... ...+++..++.++.|++.||+||| +.+++|+||+|+||+++.++.++|+|||++............
T Consensus 86 ~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 162 (261)
T cd05072 86 GSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTARE 162 (261)
T ss_pred CcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEecCCCcEEECCCccceecCCCceeccC
Confidence 9999998653 456889999999999999999999 789999999999999999999999999999876432222222
Q ss_pred cccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCC
Q 040826 224 DVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNIN 302 (347)
Q Consensus 224 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 302 (347)
...++..|+|||.+.+..++.++|+||||+++|+|++ |..||...... +....... +.. . +. .
T Consensus 163 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~-~~~~~~~~----~~~-~-----~~-----~ 226 (261)
T cd05072 163 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS-DVMSALQR----GYR-M-----PR-----M 226 (261)
T ss_pred CCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH-HHHHHHHc----CCC-C-----CC-----C
Confidence 3345678999999988889999999999999999998 88888643211 11111111 110 0 00 1
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 040826 303 RADFESILKIAVLCVAKSSKGRPTIDVVYEEIDK 336 (347)
Q Consensus 303 ~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~ 336 (347)
.....++.+++.+||+.+|++|||++++.+.|++
T Consensus 227 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 227 ENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred CCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 1223578999999999999999999999999986
No 41
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=2.9e-43 Score=321.01 Aligned_cols=255 Identities=25% Similarity=0.407 Sum_probs=201.2
Q ss_pred cCcccCCeeeecCCeeEEEEEeC------CCCEEEEEEcccCCC---hhHHHHHHHHhhcC-CCCcceeeeeEEEeCCeE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP------SGQVVAIKHIYKSNN---TDSFSREVEGLSRV-RHPNLVCLFGCCVEGGEQ 135 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~---~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 135 (347)
++|...+.||+|+||.||+|... ++..||+|.+..... ...+.+|+.+++.+ +|+||+++++++...+..
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~ 117 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPV 117 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCe
Confidence 46777889999999999998832 335799999976433 24578899999999 899999999999999999
Q ss_pred EEEEeecCCCChHHHhhcCC------------------------------------------------------------
Q 040826 136 YLVYEFCAAGNLAQHLLRKD------------------------------------------------------------ 155 (347)
Q Consensus 136 ~lv~e~~~~gsL~~~l~~~~------------------------------------------------------------ 155 (347)
++||||+++|+|.+++....
T Consensus 118 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (374)
T cd05106 118 LVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDS 197 (374)
T ss_pred EEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccc
Confidence 99999999999999885321
Q ss_pred ---------CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccce-eecc
Q 040826 156 ---------SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKV-FTDV 225 (347)
Q Consensus 156 ---------~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~-~~~~ 225 (347)
..+++..+++++.|++.||.||| ++|++||||||+||++++++.++|+|||++.......... ....
T Consensus 198 ~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~ 274 (374)
T cd05106 198 KDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLA---SKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNA 274 (374)
T ss_pred cchhccCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCC
Confidence 24678889999999999999999 8899999999999999999999999999987653222111 1223
Q ss_pred cCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHH
Q 040826 226 RGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRA 304 (347)
Q Consensus 226 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 304 (347)
.++..|+|||++.+..++.++||||||+++|+|++ |+.||....... ........ +... ..+ ..
T Consensus 275 ~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-~~~~~~~~---~~~~----~~~---~~---- 339 (374)
T cd05106 275 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-KFYKMVKR---GYQM----SRP---DF---- 339 (374)
T ss_pred CCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH-HHHHHHHc---ccCc----cCC---CC----
Confidence 35678999999998899999999999999999997 999986433222 11111111 1000 000 11
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 040826 305 DFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAW 338 (347)
Q Consensus 305 ~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~ 338 (347)
...++.+++.+||+.||.+|||+.+|++.|++++
T Consensus 340 ~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 340 APPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 1357999999999999999999999999999875
No 42
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=9.1e-44 Score=297.87 Aligned_cols=262 Identities=23% Similarity=0.290 Sum_probs=210.4
Q ss_pred hcCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCCChh----HHHHHHHHhhcCCCCcceeeeeEEEe--CCeEEE
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNNTD----SFSREVEGLSRVRHPNLVCLFGCCVE--GGEQYL 137 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~----~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~l 137 (347)
.++|...+.|++|.||.||+|+. .+++.||+|+++.+.+.. ...+|+.+|.+++|||||.+-.+... -+.+|+
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~ 154 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI 154 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence 34566678899999999999994 478999999998876544 57799999999999999999988764 457999
Q ss_pred EEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCC
Q 040826 138 VYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217 (347)
Q Consensus 138 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 217 (347)
|||||+. +|..++....+++...++..++.|++.|++||| .+.|+||||||+|+|++..|.+||+|||+|+.++..
T Consensus 155 VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH---~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp 230 (419)
T KOG0663|consen 155 VMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLH---DNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSP 230 (419)
T ss_pred eHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHh---hceeEecccchhheeeccCCcEEecccchhhhhcCC
Confidence 9999998 999999887888999999999999999999999 889999999999999999999999999999998743
Q ss_pred ccceeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCC-Cccccc--
Q 040826 218 ESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKR-PIKDFE-- 293 (347)
Q Consensus 218 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-- 293 (347)
....+..+.|.+|.|||.+.+ ..|+.+.|+||+|||+.||+++++.|.+.. .-+++..+.+....+.. ..+.+.
T Consensus 231 -~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~s-E~dQl~~If~llGtPte~iwpg~~~l 308 (419)
T KOG0663|consen 231 -LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKS-EIDQLDKIFKLLGTPSEAIWPGYSEL 308 (419)
T ss_pred -cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCc-hHHHHHHHHHHhCCCccccCCCcccc
Confidence 445677789999999999887 469999999999999999999999887543 33445555444322110 000000
Q ss_pred ------------CCCCCCCCCHH-HHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 294 ------------DPRLNGNINRA-DFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 294 ------------~~~l~~~~~~~-~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
-..+.+.+... ..+.-++|+...|..||.+|.|+.+.++
T Consensus 309 p~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 309 PAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred chhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 00111111111 3367889999999999999999999875
No 43
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=4.5e-43 Score=305.28 Aligned_cols=253 Identities=22% Similarity=0.359 Sum_probs=204.3
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC-ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecC
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCA 143 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 143 (347)
.+|...+.||+|++|.||+|... +++.+++|.+.... ....+.+|++.+++++|+|++++++++..++..+++|||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT 85 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCC
Confidence 34667788999999999999954 58899999886543 24568899999999999999999999999999999999999
Q ss_pred CCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcccee
Q 040826 144 AGNLAQHLLRK-DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVF 222 (347)
Q Consensus 144 ~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 222 (347)
+++|.+++... ...+++..++.++.|+++||+||| +++++|+||||+||++++++.++|+|||++...........
T Consensus 86 ~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~ 162 (263)
T cd05052 86 YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 162 (263)
T ss_pred CCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCcEEeCCCccccccccceeecc
Confidence 99999998653 346899999999999999999999 88999999999999999999999999999887643322222
Q ss_pred ecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCC
Q 040826 223 TDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNI 301 (347)
Q Consensus 223 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 301 (347)
.....+..|+|||.+.+..++.++||||||+++|+|++ |..|+.... ..+.... ...+... ..
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~-~~~~~~~----~~~~~~~-----------~~ 226 (263)
T cd05052 163 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYEL----LEKGYRM-----------ER 226 (263)
T ss_pred CCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC-HHHHHHH----HHCCCCC-----------CC
Confidence 22334668999999998899999999999999999998 888876432 1111111 1111100 11
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 040826 302 NRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKA 337 (347)
Q Consensus 302 ~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~ 337 (347)
+...+.++.+++.+||+.+|++|||+.++++.|+.+
T Consensus 227 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 227 PEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 122346799999999999999999999999999876
No 44
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=9.8e-43 Score=303.66 Aligned_cols=253 Identities=28% Similarity=0.388 Sum_probs=204.3
Q ss_pred cCcccCCeeeecCCeeEEEEEeCC----CCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLPS----GQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLV 138 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 138 (347)
++|...+.||+|+||.||+|.+.. ...|++|.+..... ...+.+|+..+++++||||+++++++...+..+++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 467788899999999999998642 35799998865433 24678899999999999999999999999999999
Q ss_pred EeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCc
Q 040826 139 YEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE 218 (347)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 218 (347)
|||+++++|.+++......+++..++.++.|++.|+.||| +.+++|+||+|+||++++++.++|+|||++.......
T Consensus 84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~ 160 (266)
T cd05033 84 TEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSE 160 (266)
T ss_pred EEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCCEEECccchhhcccccc
Confidence 9999999999999776667999999999999999999999 7899999999999999999999999999998764211
Q ss_pred cc-eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCC
Q 040826 219 SK-VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPR 296 (347)
Q Consensus 219 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (347)
.. ......++..|+|||.+.+..++.++||||||+++|+|++ |..||...... . ....+..+...
T Consensus 161 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~-~----~~~~~~~~~~~-------- 227 (266)
T cd05033 161 ATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ-D----VIKAVEDGYRL-------- 227 (266)
T ss_pred cceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH-H----HHHHHHcCCCC--------
Confidence 11 1122335678999999998889999999999999999998 88887532211 1 11111111100
Q ss_pred CCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 040826 297 LNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKA 337 (347)
Q Consensus 297 l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~ 337 (347)
+.....++.+.+++.+||+.+|++||++.+|++.|+++
T Consensus 228 ---~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 228 ---PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred ---CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 01112346799999999999999999999999999886
No 45
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.9e-43 Score=313.00 Aligned_cols=244 Identities=23% Similarity=0.293 Sum_probs=197.4
Q ss_pred hcCcccCCeeeecCCeeEEEEE-eCCCCEEEEEEcccCC-----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEE
Q 040826 65 INNDWDRRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSN-----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLV 138 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 138 (347)
.++|.....||+|+||.||+|+ ..+|..+|+|++.++. .......|-.+|....+|.||+++..|++...+|||
T Consensus 140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLi 219 (550)
T KOG0605|consen 140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLI 219 (550)
T ss_pred cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEE
Confidence 5678888999999999999999 5579999999998753 445788899999999999999999999999999999
Q ss_pred EeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCC--
Q 040826 139 YEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM-- 216 (347)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~-- 216 (347)
|||.+||++..+|... +.+++..+..++++++.|+..|| +.|++||||||+|+|||..|.+||+|||++.-+..
T Consensus 220 MEylPGGD~mTLL~~~-~~L~e~~arfYiaE~vlAI~~iH---~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~ 295 (550)
T KOG0605|consen 220 MEYLPGGDMMTLLMRK-DTLTEDWARFYIAETVLAIESIH---QLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKH 295 (550)
T ss_pred EEecCCccHHHHHHhc-CcCchHHHHHHHHHHHHHHHHHH---HcCcccccCChhheeecCCCCEeeccccccchhhhhh
Confidence 9999999999988654 46999999999999999999999 89999999999999999999999999999853311
Q ss_pred --------------------Cccc-----e-------------------eecccCCCCccccccccCCccCCcccHHHHH
Q 040826 217 --------------------EESK-----V-------------------FTDVRGTIGYMDPEYMTNAKLTCASDIYSFG 252 (347)
Q Consensus 217 --------------------~~~~-----~-------------------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG 252 (347)
.... . ....+||+.|+|||++.+..|+..+|+||||
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG 375 (550)
T KOG0605|consen 296 RIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLG 375 (550)
T ss_pred hhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHH
Confidence 0000 0 0113699999999999999999999999999
Q ss_pred HHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCC
Q 040826 253 IVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPT 326 (347)
Q Consensus 253 ~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps 326 (347)
||+||||.|.+||..+.+... .+.+......+.- +-......+..+||.+|+. ||++|.-
T Consensus 376 ~ImyEmLvGyPPF~s~tp~~T-----~rkI~nwr~~l~f--------P~~~~~s~eA~DLI~rll~-d~~~RLG 435 (550)
T KOG0605|consen 376 CIMYEMLVGYPPFCSETPQET-----YRKIVNWRETLKF--------PEEVDLSDEAKDLITRLLC-DPENRLG 435 (550)
T ss_pred HHHHHHHhCCCCCCCCCHHHH-----HHHHHHHhhhccC--------CCcCcccHHHHHHHHHHhc-CHHHhcC
Confidence 999999999999986554432 1222111100000 0111222678999999997 9999965
No 46
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=7.4e-43 Score=307.94 Aligned_cols=261 Identities=21% Similarity=0.287 Sum_probs=201.2
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC---ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN---NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
++|...+.||+|+||.||+|... +++.||+|.+.... ....+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 46778889999999999999954 78899999886432 234677999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccce
Q 040826 142 CAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKV 221 (347)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 221 (347)
+++ +|.+++...+..+++..+..++.|++.||+||| +.|++||||||+||+++.++.+||+|||++....... ..
T Consensus 85 ~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~-~~ 159 (288)
T cd07871 85 LDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCH---KRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPT-KT 159 (288)
T ss_pred CCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCC-cc
Confidence 986 999988766667899999999999999999999 8899999999999999999999999999987643221 12
Q ss_pred eecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCC----------Ccc
Q 040826 222 FTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKR----------PIK 290 (347)
Q Consensus 222 ~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~----------~~~ 290 (347)
.....++..|+|||.+.+ ..++.++|+||+|+++|+|++|+.||...... +.+....+....... ...
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T cd07871 160 YSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVK-EELHLIFRLLGTPTEETWPGITSNEEFR 238 (288)
T ss_pred ccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCChHHhhccccchhhh
Confidence 233467899999998865 56889999999999999999999999754322 222222221111100 001
Q ss_pred cccCCCCCCC----CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 291 DFEDPRLNGN----INRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 291 ~~~~~~l~~~----~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
....+..... .......+..+|+.+||+.||.+|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 239 SYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred ccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 1111111000 00112356889999999999999999999975
No 47
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=7.4e-43 Score=302.72 Aligned_cols=249 Identities=26% Similarity=0.392 Sum_probs=201.5
Q ss_pred CcccCCeeeecCCeeEEEEEeCCCCEEEEEEcccCC-ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCCC
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 145 (347)
+|...+.||+|+||.||++...++..+++|.+.... ....+.+|+++++.++|||++++++++...+..++++||++++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANG 84 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCC
Confidence 456678899999999999998777889999886543 3457889999999999999999999999888999999999999
Q ss_pred ChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeecc
Q 040826 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDV 225 (347)
Q Consensus 146 sL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 225 (347)
+|.+++......+++..+..++.|++.|+.||| +.+++|+||+|+||++++++.++|+|||+++.............
T Consensus 85 ~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 161 (256)
T cd05059 85 CLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLE---SNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGT 161 (256)
T ss_pred CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHhhEEECCCCcEEECCcccceecccccccccCCC
Confidence 999999766667899999999999999999999 88999999999999999999999999999886542222222222
Q ss_pred cCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHH
Q 040826 226 RGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRA 304 (347)
Q Consensus 226 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 304 (347)
.++..|+|||.+.+..++.++|+||||+++|++++ |..||..... .+.... ...+... ..+..
T Consensus 162 ~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-~~~~~~----~~~~~~~-----------~~~~~ 225 (256)
T cd05059 162 KFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSN-SEVVES----VSAGYRL-----------YRPKL 225 (256)
T ss_pred CCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCH-HHHHHH----HHcCCcC-----------CCCCC
Confidence 34568999999998889999999999999999999 7888764322 111111 1111110 01112
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 040826 305 DFESILKIAVLCVAKSSKGRPTIDVVYEEI 334 (347)
Q Consensus 305 ~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l 334 (347)
.+.++.+++.+||+.+|++|||+.++++.|
T Consensus 226 ~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 226 APTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 345799999999999999999999999876
No 48
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=5.1e-42 Score=348.85 Aligned_cols=266 Identities=28% Similarity=0.493 Sum_probs=213.0
Q ss_pred HHhcCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCCChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 63 NAINNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 63 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
.....+...+.||+|+||.||+|.. .+|..||+|++...... ...|++.+++++||||+++++++.+.+..++||||
T Consensus 687 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey 764 (968)
T PLN00113 687 DILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI--PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEY 764 (968)
T ss_pred HHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc--cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeC
Confidence 3445677788999999999999996 57899999988654332 23568899999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccce
Q 040826 142 CAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKV 221 (347)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 221 (347)
+++|+|.+++.. ++|..+.+++.|+++|++|||+.++.+++||||||+||+++.++..++. ||.......
T Consensus 765 ~~~g~L~~~l~~----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~----- 834 (968)
T PLN00113 765 IEGKNLSEVLRN----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT----- 834 (968)
T ss_pred CCCCcHHHHHhc----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc-----
Confidence 999999999842 8899999999999999999997767899999999999999999888775 655443211
Q ss_pred eecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCC--
Q 040826 222 FTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNG-- 299 (347)
Q Consensus 222 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-- 299 (347)
.....++..|+|||++.+..++.++||||||+++|||+||+.|+............+.+..... .......++.+..
T Consensus 835 ~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 913 (968)
T PLN00113 835 DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSD-CHLDMWIDPSIRGDV 913 (968)
T ss_pred CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCc-cchhheeCccccCCC
Confidence 1123578899999999999999999999999999999999999865444333444444332221 1233344555433
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 040826 300 NINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWKNT 341 (347)
Q Consensus 300 ~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~~~ 341 (347)
....+...++.+++.+||+.||++||||.||++.|+++.+..
T Consensus 914 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~ 955 (968)
T PLN00113 914 SVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSS 955 (968)
T ss_pred CccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhccc
Confidence 345566778999999999999999999999999999997754
No 49
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.6e-42 Score=308.10 Aligned_cols=263 Identities=24% Similarity=0.322 Sum_probs=201.9
Q ss_pred hcCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC---ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEe
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN---NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYE 140 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 140 (347)
.++|...+.||+|+||.||+|... +|+.||+|.+.... ....+.+|+.+++.++||||+++++++.+....++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 357888899999999999999965 78999999986532 23457789999999999999999999999999999999
Q ss_pred ecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccc
Q 040826 141 FCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220 (347)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 220 (347)
|+++ +|.+++......+++..+..++.|++.||.||| +.+++||||||+||++++++.+||+|||++...... ..
T Consensus 84 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~ 158 (303)
T cd07869 84 YVHT-DLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIH---QRYILHRDLKPQNLLISDTGELKLADFGLARAKSVP-SH 158 (303)
T ss_pred CCCc-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECCCCcceeccCC-Cc
Confidence 9965 888888766667899999999999999999999 889999999999999999999999999998754322 12
Q ss_pred eeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCC-------Ccccc
Q 040826 221 VFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKR-------PIKDF 292 (347)
Q Consensus 221 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 292 (347)
......++..|+|||.+.+ ..++.++||||+|+++|+|++|..||....+....+............ ....+
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (303)
T cd07869 159 TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHF 238 (303)
T ss_pred cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcccc
Confidence 2234567899999998865 457889999999999999999999997654433333333222111000 00000
Q ss_pred cCCCCC--CC--CC-----HHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 293 EDPRLN--GN--IN-----RADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 293 ~~~~l~--~~--~~-----~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
...... .. .. ......+.+|+.+||+.||.+|||+.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 239 KPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred ccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 000000 00 00 011246889999999999999999999986
No 50
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=3.6e-43 Score=315.53 Aligned_cols=243 Identities=23% Similarity=0.283 Sum_probs=199.6
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccC-----CChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKS-----NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVY 139 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 139 (347)
++|...+.||+|+||.||+|... +|+.||+|.+... .....+.+|+.++++++||||+++++++.+++..+++|
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 46777889999999999999964 6899999998653 22346889999999999999999999999999999999
Q ss_pred eecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcc
Q 040826 140 EFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES 219 (347)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 219 (347)
||+++|+|.+++... ..+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||++......
T Consensus 98 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~-- 171 (329)
T PTZ00263 98 EFVVGGELFTHLRKA-GRFPNDVAKFYHAELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR-- 171 (329)
T ss_pred cCCCCChHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC--
Confidence 999999999988654 45889999999999999999999 889999999999999999999999999999875322
Q ss_pred ceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCC
Q 040826 220 KVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNG 299 (347)
Q Consensus 220 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 299 (347)
.....|++.|+|||.+.+..++.++||||||+++|+|++|..||...... .....+..+..+...
T Consensus 172 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-----~~~~~i~~~~~~~p~-------- 236 (329)
T PTZ00263 172 --TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPF-----RIYEKILAGRLKFPN-------- 236 (329)
T ss_pred --cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHH-----HHHHHHhcCCcCCCC--------
Confidence 12346899999999999988999999999999999999999999743221 111222222211111
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHHH
Q 040826 300 NINRADFESILKIAVLCVAKSSKGRPT-----IDVVYEE 333 (347)
Q Consensus 300 ~~~~~~~~~l~~l~~~cl~~~p~~Rps-----~~ei~~~ 333 (347)
.+ ...+.+|+.+||+.||.+||+ +.+++++
T Consensus 237 ~~----~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 237 WF----DGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred CC----CHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 12 246889999999999999997 6777644
No 51
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=7e-43 Score=307.97 Aligned_cols=262 Identities=24% Similarity=0.281 Sum_probs=200.8
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEe
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYE 140 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 140 (347)
++|...+.||+|+||.||+|... +++.+|+|++.... ....+.+|+.+++.++||||+++++++..++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 36778889999999999999965 68899999986542 23467889999999999999999999999999999999
Q ss_pred ecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccc
Q 040826 141 FCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220 (347)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 220 (347)
|++++++.. +......+++..+..++.|++.||.||| +.+++|+||||+||+++.++.++|+|||++.........
T Consensus 81 ~~~~~~l~~-~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 156 (287)
T cd07848 81 YVEKNMLEL-LEEMPNGVPPEKVRSYIYQLIKAIHWCH---KNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNA 156 (287)
T ss_pred cCCCCHHHH-HHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccc
Confidence 999866654 4344456899999999999999999999 889999999999999999999999999999875433222
Q ss_pred eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcC----------CCCCcc
Q 040826 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSM----------GKRPIK 290 (347)
Q Consensus 221 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~----------~~~~~~ 290 (347)
......++..|+|||++.+..++.++|+||||+++|+|++|+.||...... +........... ......
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T cd07848 157 NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEI-DQLFTIQKVLGPLPAEQMKLFYSNPRFH 235 (287)
T ss_pred cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhhCCCCHHHHHhhhccchhc
Confidence 333456899999999999888999999999999999999999999754322 111111111000 000000
Q ss_pred cccCCCCCC------CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 291 DFEDPRLNG------NINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 291 ~~~~~~l~~------~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
....+.... ........++.+|+.+||+.||++|||++++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 236 GLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred ccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000011000 011123457999999999999999999999885
No 52
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=3.4e-43 Score=305.29 Aligned_cols=245 Identities=31% Similarity=0.534 Sum_probs=191.9
Q ss_pred CCeeeecCCeeEEEEEeC-----CCCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeec
Q 040826 71 RRFLGRGSAGLVYKGVLP-----SGQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFC 142 (347)
Q Consensus 71 ~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 142 (347)
.+.||.|.||.||+|.+. .+..|+||.+..... ...+.+|++.+++++||||++++|++...+..++|+||+
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~ 83 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC 83 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 457999999999999975 356899999965433 357899999999999999999999999888899999999
Q ss_pred CCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcc-c
Q 040826 143 AAGNLAQHLLRK-DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES-K 220 (347)
Q Consensus 143 ~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~-~ 220 (347)
++|+|.+++... ...+++..+..++.|++.||.||| +.+++|++|+++||++++++.+||+|||++........ .
T Consensus 84 ~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh---~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~ 160 (259)
T PF07714_consen 84 PGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLH---SNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYK 160 (259)
T ss_dssp TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHH---HTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEE
T ss_pred ccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccccc
Confidence 999999999876 667999999999999999999999 77899999999999999999999999999987632212 2
Q ss_pred eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCC
Q 040826 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNG 299 (347)
Q Consensus 221 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 299 (347)
..........|+|||.+.+..++.++||||||+++||+++ |+.|+... ...+..... .. +...
T Consensus 161 ~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~-~~~~~~~~~-~~---~~~~----------- 224 (259)
T PF07714_consen 161 NDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY-DNEEIIEKL-KQ---GQRL----------- 224 (259)
T ss_dssp ESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS-CHHHHHHHH-HT---TEET-----------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccc-cc---cccc-----------
Confidence 2333457789999999998889999999999999999999 56776533 222222222 11 1111
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 040826 300 NINRADFESILKIAVLCVAKSSKGRPTIDVVYEEI 334 (347)
Q Consensus 300 ~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l 334 (347)
..+..+...+.+++.+||+.+|++|||+.+|++.|
T Consensus 225 ~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 225 PIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp TSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred eeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 11112346799999999999999999999999886
No 53
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-44 Score=320.11 Aligned_cols=268 Identities=22% Similarity=0.347 Sum_probs=229.5
Q ss_pred HHHHHHhcCcccCCeeeecCCeeEEEEEeCC-CCEEEEEEcccCC-ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEE
Q 040826 59 DEIENAINNDWDRRFLGRGSAGLVYKGVLPS-GQVVAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQY 136 (347)
Q Consensus 59 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 136 (347)
++|+.-..+....++||-|.||.||.|.|+. ...||||.+..+. ...+|..|..+|+.++|||+|+++|+|..+..+|
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFY 339 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFY 339 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeE
Confidence 4444445556667899999999999999864 6689999998764 4578999999999999999999999999999999
Q ss_pred EEEeecCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecC
Q 040826 137 LVYEFCAAGNLAQHLLRK-DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLG 215 (347)
Q Consensus 137 lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 215 (347)
+|+|||..|+|.+|++.. ....+.-..+.++.||+.|+.||. .+++|||||...|+|+.++..+|++|||+++.+.
T Consensus 340 IiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLE---kknFIHRDLAARNCLVgEnhiVKvADFGLsRlMt 416 (1157)
T KOG4278|consen 340 IITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHIVKVADFGLSRLMT 416 (1157)
T ss_pred EEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHH---HhhhhhhhhhhhhccccccceEEeeccchhhhhc
Confidence 999999999999999874 345777788899999999999999 8899999999999999999999999999999987
Q ss_pred CCccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCC
Q 040826 216 MEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDP 295 (347)
Q Consensus 216 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (347)
.+.+....+..-+..|.|||.+....++.++|||+||++|||+.|-....+.+.+....+....+++++.
T Consensus 417 gDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM~---------- 486 (1157)
T KOG4278|consen 417 GDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRMD---------- 486 (1157)
T ss_pred CCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhcccccc----------
Confidence 6666666667778899999999999999999999999999999986554444555555555555555443
Q ss_pred CCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhhhh
Q 040826 296 RLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWKNTMVE 344 (347)
Q Consensus 296 ~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~~~~~~ 344 (347)
.+..|++.+++||..||+.+|.+||+++||-+.+|.++.++.++
T Consensus 487 -----~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~sSis 530 (1157)
T KOG4278|consen 487 -----GPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSSSSIS 530 (1157)
T ss_pred -----CCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhcccccc
Confidence 23467789999999999999999999999999999999887653
No 54
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=1.5e-42 Score=301.90 Aligned_cols=253 Identities=26% Similarity=0.382 Sum_probs=204.1
Q ss_pred cCcccCCeeeecCCeeEEEEEeCCCCEEEEEEcccCC-ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCC
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAA 144 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 144 (347)
++|...++||+|+||.||+|...++..|++|.+.... ....+.+|++++++++||||+++++.+. ....+++|||+++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~ 84 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSK 84 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCCC
Confidence 4577888999999999999997777789999987643 3457889999999999999999999875 4567999999999
Q ss_pred CChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceee
Q 040826 145 GNLAQHLLRK-DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT 223 (347)
Q Consensus 145 gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 223 (347)
|+|.+++... +..+++..+..++.|++.||+||| +.+++|+||+|+||++++++.++|+|||.+............
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~ 161 (262)
T cd05071 85 GSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 161 (262)
T ss_pred CcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcccEEEcCCCcEEeccCCceeecccccccccc
Confidence 9999999653 346899999999999999999999 889999999999999999999999999999866433322223
Q ss_pred cccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCC
Q 040826 224 DVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNIN 302 (347)
Q Consensus 224 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 302 (347)
...++..|+|||...+..++.++|+||||+++|+|++ |..||...... .... ....+... ...
T Consensus 162 ~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~-~~~~----~~~~~~~~-----------~~~ 225 (262)
T cd05071 162 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-EVLD----QVERGYRM-----------PCP 225 (262)
T ss_pred CCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH-HHHH----HHhcCCCC-----------CCc
Confidence 3446778999999988889999999999999999999 77777643221 1111 11111100 112
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 040826 303 RADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAW 338 (347)
Q Consensus 303 ~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~ 338 (347)
.+.+..+.+++.+||+.+|++|||+.++++.|++.+
T Consensus 226 ~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~ 261 (262)
T cd05071 226 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 261 (262)
T ss_pred cccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence 234467899999999999999999999999999875
No 55
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.1e-42 Score=306.05 Aligned_cols=252 Identities=27% Similarity=0.429 Sum_probs=202.8
Q ss_pred cCcccCCeeeecCCeeEEEEEeCC-C-----CEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLPS-G-----QVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQY 136 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~~-~-----~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 136 (347)
++|...+.||+|+||.||+|...+ + ..+++|.+..... ...+.+|+..+++++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 356677889999999999998532 2 5799998875443 246889999999999999999999999888999
Q ss_pred EEEeecCCCChHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCC
Q 040826 137 LVYEFCAAGNLAQHLLRKD---------------SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKL 201 (347)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~ 201 (347)
++|||+++++|.+++.... ..+++..++.++.|++.||.||| +.+++|+||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLS---SHHFVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccccceEEEcCCC
Confidence 9999999999999986431 45788999999999999999999 88999999999999999999
Q ss_pred ceEEeecccceecCCCcc-ceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHH
Q 040826 202 EPKLSDFGLAKMLGMEES-KVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKA 279 (347)
Q Consensus 202 ~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~ 279 (347)
.++|+|||++........ .......++..|+|||.+.+..++.++||||||+++|+|++ |..||...... + ..
T Consensus 162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~-~-~~--- 236 (283)
T cd05048 162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ-E-VI--- 236 (283)
T ss_pred cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH-H-HH---
Confidence 999999999886533222 12233456788999999988889999999999999999998 99888643221 1 11
Q ss_pred hhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 040826 280 RDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDK 336 (347)
Q Consensus 280 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~ 336 (347)
..+..+... ..+..++.++.+|+.+||+.||.+|||+.+|++.|++
T Consensus 237 ~~i~~~~~~-----------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 237 EMIRSRQLL-----------PCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHcCCcC-----------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 111111111 1122445789999999999999999999999999975
No 56
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=2.9e-43 Score=310.94 Aligned_cols=243 Identities=24% Similarity=0.236 Sum_probs=199.2
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC-----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN-----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVY 139 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 139 (347)
++|...+.||+|+||.||+|... +|+.+|+|.+.... ....+.+|+.++++++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 35777889999999999999964 68999999986432 2346788999999999999999999999999999999
Q ss_pred eecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcc
Q 040826 140 EFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES 219 (347)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 219 (347)
||+++|+|.+++... ..+++..+..++.|++.||+||| ++|++||||||+||+++.++.++|+|||++......
T Consensus 81 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~-- 154 (291)
T cd05612 81 EYVPGGELFSYLRNS-GRFSNSTGLFYASEIVCALEYLH---SKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR-- 154 (291)
T ss_pred eCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEEecCcchhccCC--
Confidence 999999999998654 35899999999999999999999 889999999999999999999999999998865321
Q ss_pred ceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCC
Q 040826 220 KVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNG 299 (347)
Q Consensus 220 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 299 (347)
.....|+..|+|||.+.+..++.++||||||+++|+|++|+.||...... .....+..+....
T Consensus 155 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~-----~~~~~i~~~~~~~---------- 217 (291)
T cd05612 155 --TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF-----GIYEKILAGKLEF---------- 217 (291)
T ss_pred --cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHhCCcCC----------
Confidence 22346899999999999988999999999999999999999999754321 1112222222111
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHHH
Q 040826 300 NINRADFESILKIAVLCVAKSSKGRPT-----IDVVYEE 333 (347)
Q Consensus 300 ~~~~~~~~~l~~l~~~cl~~~p~~Rps-----~~ei~~~ 333 (347)
+......+.+|+.+||+.||.+||+ +.++++.
T Consensus 218 --~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 218 --PRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred --CccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 1112357899999999999999995 7777654
No 57
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-45 Score=314.61 Aligned_cols=246 Identities=30% Similarity=0.449 Sum_probs=205.3
Q ss_pred CcccCCeeeecCCeeEEEEE-eCCCCEEEEEEcccC---CChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeec
Q 040826 67 NDWDRRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKS---NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFC 142 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 142 (347)
.|...+.||+|.||.||+|. ..+++.||+|++.-. .+.+++.+|+.++..++++||.++++.+..+..++++||||
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~ 93 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC 93 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence 34445779999999999999 457899999998644 33457889999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcccee
Q 040826 143 AAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVF 222 (347)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 222 (347)
.||++.+.+... ..+.+..+.-+++++..|+.||| ..+.+|||||+.||++..+|.+|++|||++..+...... .
T Consensus 94 ~gGsv~~lL~~~-~~~~E~~i~~ilre~l~~l~ylH---~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~r-r 168 (467)
T KOG0201|consen 94 GGGSVLDLLKSG-NILDEFEIAVILREVLKGLDYLH---SEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKR-R 168 (467)
T ss_pred cCcchhhhhccC-CCCccceeeeehHHHHHHhhhhh---hcceecccccccceeEeccCcEEEEecceeeeeechhhc-c
Confidence 999999988543 34578888889999999999999 889999999999999999999999999999887543333 3
Q ss_pred ecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCC
Q 040826 223 TDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNIN 302 (347)
Q Consensus 223 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 302 (347)
...+||+.|||||++....|+.++||||||++++||.+|.+|+..-.+. .+.-. +..-..|.+.+.+
T Consensus 169 ~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPm-----rvlfl-------Ipk~~PP~L~~~~- 235 (467)
T KOG0201|consen 169 KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPM-----RVLFL-------IPKSAPPRLDGDF- 235 (467)
T ss_pred ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcc-----eEEEe-------ccCCCCCcccccc-
Confidence 7789999999999999989999999999999999999999998743321 11111 2222234555433
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 303 RADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 303 ~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
...+.+++..||.+||+.|||+.+++++
T Consensus 236 ---S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 236 ---SPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred ---CHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 3569999999999999999999999874
No 58
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.1e-44 Score=302.46 Aligned_cols=257 Identities=25% Similarity=0.283 Sum_probs=205.2
Q ss_pred CcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCCChhHHHHHHHHhhcCCCCcceeeeeEEEeCC-----eEEEEEe
Q 040826 67 NDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGG-----EQYLVYE 140 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~lv~e 140 (347)
.|...+++|+|+||.||.|.. .+++.||||+...+..... +|+++|+.+.|||||++.-+|.... ...+|||
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~kn--rEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVle 102 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYKN--RELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLE 102 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcCc--HHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHH
Confidence 455678899999999999994 4578999999987665443 7999999999999999998887532 2358999
Q ss_pred ecCCCChHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCC-CceEEeecccceecCC
Q 040826 141 FCAAGNLAQHLLR---KDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEK-LEPKLSDFGLAKMLGM 216 (347)
Q Consensus 141 ~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~-~~~kl~dfg~~~~~~~ 216 (347)
|++. ||.+.++. .+..++...+.-+..|+++||.||| +.||+||||||.|+|+|.+ |.+||||||.|+.+..
T Consensus 103 ymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh---~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~ 178 (364)
T KOG0658|consen 103 YMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLH---SHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVK 178 (364)
T ss_pred hchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHH---hcCcccCCCChheEEEcCCCCeEEeccCCcceeecc
Confidence 9998 99998864 3556777888889999999999999 8899999999999999976 8999999999998753
Q ss_pred CccceeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCC--------C
Q 040826 217 EESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGK--------R 287 (347)
Q Consensus 217 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~--------~ 287 (347)
. ........|..|.|||.+.| ..|+.+.||||.||++.||+-|++.|.+ ....+++..+.+...... .
T Consensus 179 ~--epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG-~s~~dQL~eIik~lG~Pt~e~I~~mn~ 255 (364)
T KOG0658|consen 179 G--EPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPG-DSSVDQLVEIIKVLGTPTREDIKSMNP 255 (364)
T ss_pred C--CCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCC-CCHHHHHHHHHHHhCCCCHHHHhhcCc
Confidence 3 22345567889999999987 5799999999999999999999999975 556677777776543321 2
Q ss_pred CcccccCCCCCC-----CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 288 PIKDFEDPRLNG-----NINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 288 ~~~~~~~~~l~~-----~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
...++..|.+.. ........+..+|+.++++.+|++|.++.|++.
T Consensus 256 ~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 256 NYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred ccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 222223333322 123345578999999999999999999999875
No 59
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=5.4e-43 Score=313.68 Aligned_cols=239 Identities=25% Similarity=0.297 Sum_probs=194.9
Q ss_pred CeeeecCCeeEEEEEe-CCCCEEEEEEcccCC-----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCCC
Q 040826 72 RFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN-----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 145 (347)
+.||+|+||.||++.. .+|+.+|+|.+.... ....+.+|+.++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 3699999999999995 478999999987532 2245778999999999999999999999999999999999999
Q ss_pred ChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeecc
Q 040826 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDV 225 (347)
Q Consensus 146 sL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 225 (347)
+|.+++... ..+++..+..++.|++.||.||| +.|++||||||+||+++.++.+||+|||++..... ........
T Consensus 81 ~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~-~~~~~~~~ 155 (323)
T cd05571 81 ELFFHLSRE-RVFSEDRARFYGAEIVSALGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGIS-DGATMKTF 155 (323)
T ss_pred cHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEeeCCCCccccc-CCCcccce
Confidence 999988654 46899999999999999999999 88999999999999999999999999999875321 12223345
Q ss_pred cCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHH
Q 040826 226 RGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRAD 305 (347)
Q Consensus 226 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 305 (347)
.|+..|+|||.+.+..++.++|||||||++|+|++|..||...... .....+..+.... +...
T Consensus 156 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~-----~~~~~~~~~~~~~------------p~~~ 218 (323)
T cd05571 156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KLFELILMEEIRF------------PRTL 218 (323)
T ss_pred ecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHH-----HHHHHHHcCCCCC------------CCCC
Confidence 6899999999999999999999999999999999999999743221 1111121111111 1123
Q ss_pred HHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q 040826 306 FESILKIAVLCVAKSSKGRP-----TIDVVYE 332 (347)
Q Consensus 306 ~~~l~~l~~~cl~~~p~~Rp-----s~~ei~~ 332 (347)
..++.+++.+||+.||.+|| ++.++++
T Consensus 219 ~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 219 SPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred CHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 35789999999999999999 7888875
No 60
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1e-42 Score=311.14 Aligned_cols=257 Identities=24% Similarity=0.362 Sum_probs=204.4
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCC----EEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQ----VVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYL 137 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 137 (347)
.+|...+.||+|+||.||+|.+. +|+ .||+|.+..... ...+.+|+.+++.++||||+++++++... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 45777889999999999999853 344 389999865432 35688899999999999999999998764 5779
Q ss_pred EEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCC
Q 040826 138 VYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217 (347)
Q Consensus 138 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 217 (347)
++||+++|+|.+++......+++..++.++.|++.||+||| +.+++||||||+||++++++.+||+|||++......
T Consensus 86 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 162 (316)
T cd05108 86 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---ERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAD 162 (316)
T ss_pred eeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEecCCCcEEEccccccccccCC
Confidence 99999999999999877667899999999999999999999 889999999999999999999999999999876432
Q ss_pred ccce-eecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCC
Q 040826 218 ESKV-FTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDP 295 (347)
Q Consensus 218 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (347)
.... .....++..|+|||.+.+..++.++||||||+++|+|++ |..|+...... ....... .+...
T Consensus 163 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~--~~~~~~~---~~~~~------- 230 (316)
T cd05108 163 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILE---KGERL------- 230 (316)
T ss_pred CcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHh---CCCCC-------
Confidence 2211 122334678999999999999999999999999999998 88888643211 1111111 11110
Q ss_pred CCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhh
Q 040826 296 RLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWKNTM 342 (347)
Q Consensus 296 ~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~~~~ 342 (347)
.....+..++.+++.+||+.+|.+|||+.+++..+.++.++..
T Consensus 231 ----~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~~ 273 (316)
T cd05108 231 ----PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQ 273 (316)
T ss_pred ----CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCCc
Confidence 0011123568999999999999999999999999999977654
No 61
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=4.2e-43 Score=305.08 Aligned_cols=252 Identities=28% Similarity=0.431 Sum_probs=206.6
Q ss_pred hcCcccCCeeeecCCeeEEEEEeCCCCEEEEEEcccCCC--hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeec
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNN--TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFC 142 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 142 (347)
..+|...+.||.|+||.||+|...++..+++|.+..... ...+.+|+..++.++|+|++++++++.+....+++|||+
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 84 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELM 84 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeec
Confidence 456777888999999999999988899999999876543 457889999999999999999999999999999999999
Q ss_pred CCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccce
Q 040826 143 AAGNLAQHLLRK-DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKV 221 (347)
Q Consensus 143 ~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 221 (347)
++++|.+++... +..+++..+..++.|++.|+.||| +++++|+||+|+||++++++.++|+|||.+........ .
T Consensus 85 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~-~ 160 (261)
T cd05148 85 EKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLE---EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY-L 160 (261)
T ss_pred ccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccCcceEEEcCCceEEEccccchhhcCCccc-c
Confidence 999999999753 456899999999999999999999 78999999999999999999999999999876542211 1
Q ss_pred eecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCC
Q 040826 222 FTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGN 300 (347)
Q Consensus 222 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 300 (347)
.....++..|+|||.+.+..++.++|+||||+++|+|++ |..||.... ......... .+... .
T Consensus 161 ~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~-~~~~~~~~~----~~~~~-----------~ 224 (261)
T cd05148 161 SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMN-NHEVYDQIT----AGYRM-----------P 224 (261)
T ss_pred ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCC-HHHHHHHHH----hCCcC-----------C
Confidence 223346778999999998889999999999999999998 788886432 111112111 11110 1
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 040826 301 INRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDK 336 (347)
Q Consensus 301 ~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~ 336 (347)
....+.+.+.+++.+||+.||.+|||+.++++.|+.
T Consensus 225 ~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 225 CPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 112334679999999999999999999999999985
No 62
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=3.8e-42 Score=309.21 Aligned_cols=261 Identities=25% Similarity=0.292 Sum_probs=202.0
Q ss_pred hcCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEe
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYE 140 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 140 (347)
.++|...+.||+|+||.||++... +|..+|+|.+..... ...+.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 357888889999999999999954 688999998875432 2468899999999999999999999999999999999
Q ss_pred ecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccc
Q 040826 141 FCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220 (347)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 220 (347)
|+++++|.+++... ..+++..+..++.|++.||.|||+ ..+++|+||||+||+++.++.++|+|||++..... .
T Consensus 84 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~--~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~---~ 157 (331)
T cd06649 84 HMDGGSLDQVLKEA-KRIPEEILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---S 157 (331)
T ss_pred cCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhh--cCCEEcCCCChhhEEEcCCCcEEEccCcccccccc---c
Confidence 99999999988654 358999999999999999999994 24699999999999999999999999999876532 1
Q ss_pred eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhh-hcCCCCCccc--------
Q 040826 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARD-VSMGKRPIKD-------- 291 (347)
Q Consensus 221 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~-------- 291 (347)
......++..|+|||.+.+..++.++||||||+++|+|++|+.||...... .+...... ...+......
T Consensus 158 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (331)
T cd06649 158 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAK--ELEAIFGRPVVDGEEGEPHSISPRPRP 235 (331)
T ss_pred ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHhcccccccccCCccccCccccc
Confidence 223446899999999999989999999999999999999999999643321 11111110 0000000000
Q ss_pred ------------------------ccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 292 ------------------------FEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 292 ------------------------~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
................++.+|+.+||+.||++|||+.++++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 236 PGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH 301 (331)
T ss_pred ccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 000000000011234679999999999999999999999875
No 63
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=2.3e-42 Score=316.54 Aligned_cols=257 Identities=23% Similarity=0.340 Sum_probs=203.1
Q ss_pred hcCcccCCeeeecCCeeEEEEEeC------CCCEEEEEEcccCCC---hhHHHHHHHHhhcCC-CCcceeeeeEEEeCCe
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVLP------SGQVVAIKHIYKSNN---TDSFSREVEGLSRVR-HPNLVCLFGCCVEGGE 134 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~ 134 (347)
.++|...++||+|+||.||+|... .+..||+|++..... .+.+.+|+.+++++. ||||+++++++.+.+.
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~ 115 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP 115 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence 457778899999999999999842 234699999975432 346889999999996 9999999999999999
Q ss_pred EEEEEeecCCCChHHHhhcCC-----------------------------------------------------------
Q 040826 135 QYLVYEFCAAGNLAQHLLRKD----------------------------------------------------------- 155 (347)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~~----------------------------------------------------------- 155 (347)
.++||||+++|+|.+++.+..
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (400)
T cd05105 116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK 195 (400)
T ss_pred eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence 999999999999999875321
Q ss_pred ------------------------------------CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecC
Q 040826 156 ------------------------------------SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTE 199 (347)
Q Consensus 156 ------------------------------------~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~ 199 (347)
..+++..+..++.|++.||.||| +.+++|+||||+||++++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dikp~Nill~~ 272 (400)
T cd05105 196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLA---SKNCVHRDLAARNVLLAQ 272 (400)
T ss_pred hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHhEEEeC
Confidence 23677888999999999999999 889999999999999999
Q ss_pred CCceEEeecccceecCCCcc-ceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHH
Q 040826 200 KLEPKLSDFGLAKMLGMEES-KVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTR 277 (347)
Q Consensus 200 ~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~ 277 (347)
++.++|+|||++........ .......++..|+|||.+.+..++.++||||||+++|+|++ |..||...........
T Consensus 273 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~- 351 (400)
T cd05105 273 GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYN- 351 (400)
T ss_pred CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHH-
Confidence 99999999999986532221 11223346778999999998889999999999999999997 8888864322222111
Q ss_pred HHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 040826 278 KARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWK 339 (347)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~ 339 (347)
....+... ........++.+++.+||+.||++|||+.+|.+.|+.+++
T Consensus 352 ---~~~~~~~~-----------~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 352 ---KIKSGYRM-----------AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred ---HHhcCCCC-----------CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 11111110 1112334679999999999999999999999999998753
No 64
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=2.8e-42 Score=299.78 Aligned_cols=251 Identities=25% Similarity=0.383 Sum_probs=202.5
Q ss_pred cCcccCCeeeecCCeeEEEEEeCCCCEEEEEEcccCC-ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCC
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAA 144 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 144 (347)
++|...+.||+|+||.||+|...++..+++|.+.... ....+.+|+.++++++|+|++++++++. ....+++|||+++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~ 84 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMSK 84 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecCC
Confidence 4677788999999999999998888889999987643 3457889999999999999999999875 4568899999999
Q ss_pred CChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceee
Q 040826 145 GNLAQHLLRK-DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT 223 (347)
Q Consensus 145 gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 223 (347)
++|.+++... ...+++..+..++.|++.||.||| +.+++|+||+|+||++++++.++|+|||.+............
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 161 (260)
T cd05070 85 GSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQ 161 (260)
T ss_pred CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEEeCCceEEeCCceeeeeccCccccccc
Confidence 9999998653 345899999999999999999999 789999999999999999999999999999875433222222
Q ss_pred cccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCC
Q 040826 224 DVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNIN 302 (347)
Q Consensus 224 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 302 (347)
...++..|+|||.+.+..++.++|+||||+++|+|++ |..||.... ..+.... +..+... ...
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~-~~~~~~~----~~~~~~~-----------~~~ 225 (260)
T cd05070 162 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMN-NREVLEQ----VERGYRM-----------PCP 225 (260)
T ss_pred CCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCC-HHHHHHH----HHcCCCC-----------CCC
Confidence 3345678999999988889999999999999999999 788876432 2222222 1111110 111
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 040826 303 RADFESILKIAVLCVAKSSKGRPTIDVVYEEIDK 336 (347)
Q Consensus 303 ~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~ 336 (347)
......+.+++.+||.++|++|||++++.+.|++
T Consensus 226 ~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 226 QDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 2334679999999999999999999999999875
No 65
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=9.9e-43 Score=310.55 Aligned_cols=235 Identities=23% Similarity=0.259 Sum_probs=190.7
Q ss_pred eeecCCeeEEEEEeC-CCCEEEEEEcccC-----CChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCCCCh
Q 040826 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKS-----NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNL 147 (347)
Q Consensus 74 lg~G~~g~V~~~~~~-~~~~vavK~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 147 (347)
||+|+||.||++... +++.||+|.+... .....+.+|+.++++++||||+++++++.+.+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999954 6889999998643 2234577899999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeecccC
Q 040826 148 AQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRG 227 (347)
Q Consensus 148 ~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 227 (347)
.+++... ..+++..+..++.|++.||.||| +.+++||||||+||+++.++.++|+|||++...... ........|
T Consensus 81 ~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~g 155 (312)
T cd05585 81 FHHLQRE-GRFDLSRARFYTAELLCALENLH---KFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD-DDKTNTFCG 155 (312)
T ss_pred HHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHeEECCCCcEEEEECcccccCccC-CCccccccC
Confidence 9998654 45899999999999999999999 889999999999999999999999999998754221 222334568
Q ss_pred CCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHH
Q 040826 228 TIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFE 307 (347)
Q Consensus 228 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 307 (347)
+..|+|||.+.+..++.++||||||+++|+|++|+.||...... ............. +.....
T Consensus 156 t~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~-----~~~~~~~~~~~~~------------~~~~~~ 218 (312)
T cd05585 156 TPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVN-----EMYRKILQEPLRF------------PDGFDR 218 (312)
T ss_pred CcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHH-----HHHHHHHcCCCCC------------CCcCCH
Confidence 99999999999999999999999999999999999999743221 1222222221111 112235
Q ss_pred HHHHHHHHhccCCCCCCCCHHHH
Q 040826 308 SILKIAVLCVAKSSKGRPTIDVV 330 (347)
Q Consensus 308 ~l~~l~~~cl~~~p~~Rps~~ei 330 (347)
++.+++.+||+.||.+||++..+
T Consensus 219 ~~~~li~~~L~~dp~~R~~~~~~ 241 (312)
T cd05585 219 DAKDLLIGLLSRDPTRRLGYNGA 241 (312)
T ss_pred HHHHHHHHHcCCCHHHcCCCCCH
Confidence 78999999999999999865433
No 66
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=2.9e-42 Score=310.35 Aligned_cols=257 Identities=27% Similarity=0.395 Sum_probs=202.3
Q ss_pred cCcccCCeeeecCCeeEEEEEe------CCCCEEEEEEcccCCCh---hHHHHHHHHhhcC-CCCcceeeeeEEEe-CCe
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVL------PSGQVVAIKHIYKSNNT---DSFSREVEGLSRV-RHPNLVCLFGCCVE-GGE 134 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~---~~~~~e~~~l~~l-~h~niv~~~~~~~~-~~~ 134 (347)
++|...+.||+|+||.||+|.. .+++.||+|++...... ..+.+|+.++.++ +|+||+++++++.. +..
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~ 86 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP 86 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence 4677789999999999999963 23578999998754332 3577899999999 79999999998765 457
Q ss_pred EEEEEeecCCCChHHHhhcCC-----------------------------------------------------------
Q 040826 135 QYLVYEFCAAGNLAQHLLRKD----------------------------------------------------------- 155 (347)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~~----------------------------------------------------------- 155 (347)
.++++||+++++|.+++....
T Consensus 87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (337)
T cd05054 87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY 166 (337)
T ss_pred EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence 889999999999999885321
Q ss_pred -CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcc-ceeecccCCCCccc
Q 040826 156 -SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES-KVFTDVRGTIGYMD 233 (347)
Q Consensus 156 -~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~a 233 (347)
..+++..+..++.|++.||.||| +.+++||||||+||++++++.++|+|||++..+..... .......++..|+|
T Consensus 167 ~~~l~~~~~~~~~~qi~~aL~~lH---~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~a 243 (337)
T cd05054 167 KEPLTLEDLISYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 243 (337)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccC
Confidence 25789999999999999999999 88999999999999999999999999999987532221 12223446778999
Q ss_pred cccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHH
Q 040826 234 PEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKI 312 (347)
Q Consensus 234 PE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l 312 (347)
||++.+..++.++|||||||++|+|++ |..||....... .+.... ..+... ..+.....++.++
T Consensus 244 PE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-~~~~~~---~~~~~~-----------~~~~~~~~~~~~l 308 (337)
T cd05054 244 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-EFCRRL---KEGTRM-----------RAPEYATPEIYSI 308 (337)
T ss_pred cHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-HHHHHH---hccCCC-----------CCCccCCHHHHHH
Confidence 999999999999999999999999998 888886432211 111111 111111 0111233679999
Q ss_pred HHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 040826 313 AVLCVAKSSKGRPTIDVVYEEIDKAWKN 340 (347)
Q Consensus 313 ~~~cl~~~p~~Rps~~ei~~~l~~~~~~ 340 (347)
+.+||+.+|++|||+.|+++.|+++++.
T Consensus 309 ~~~cl~~~p~~RPs~~ell~~l~~~~~~ 336 (337)
T cd05054 309 MLDCWHNNPEDRPTFSELVEILGDLLQE 336 (337)
T ss_pred HHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999864
No 67
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.2e-42 Score=312.90 Aligned_cols=250 Identities=22% Similarity=0.267 Sum_probs=201.3
Q ss_pred CcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccC-----CChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEe
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKS-----NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYE 140 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 140 (347)
+|...+.||+|+||.||+|... +|+.||+|++... .....+.+|+.++..++||||+++++++.+.+..++|||
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 81 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME 81 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence 5777889999999999999965 6899999998653 223467889999999999999999999999999999999
Q ss_pred ecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccc
Q 040826 141 FCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220 (347)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 220 (347)
|+++|+|.+++... ..+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||++.....
T Consensus 82 ~~~g~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~---- 153 (333)
T cd05600 82 YVPGGDFRTLLNNL-GVLSEDHARFYMAEMFEAVDALH---ELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT---- 153 (333)
T ss_pred CCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEEEeCcCCccccc----
Confidence 99999999998654 45889999999999999999999 88999999999999999999999999999886432
Q ss_pred eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCC
Q 040826 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGN 300 (347)
Q Consensus 221 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 300 (347)
......|+..|+|||.+.+..++.++||||||+++|+|++|..||...... +.............. ....++
T Consensus 154 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~-~~~~~i~~~~~~~~~--~~~~~~----- 225 (333)
T cd05600 154 YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPN-ETWENLKYWKETLQR--PVYDDP----- 225 (333)
T ss_pred ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHH-HHHHHHHhccccccC--CCCCcc-----
Confidence 223456899999999999989999999999999999999999999753322 111111110000000 000000
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 301 INRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 301 ~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
......++.+++.+||+.+|.+|||+.++++.
T Consensus 226 -~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 226 -RFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred -ccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 01234678999999999999999999999865
No 68
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=2.4e-42 Score=303.43 Aligned_cols=252 Identities=26% Similarity=0.406 Sum_probs=201.7
Q ss_pred cCcccCCeeeecCCeeEEEEEeC------CCCEEEEEEcccCCCh---hHHHHHHHHhhcCCCCcceeeeeEEEeCCeEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP------SGQVVAIKHIYKSNNT---DSFSREVEGLSRVRHPNLVCLFGCCVEGGEQY 136 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~---~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 136 (347)
++|...+.||+|+||.||+|... ++..|++|.+...... ..+.+|++++++++|+|++++++++......+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 34666788999999999999853 3478999998765433 57889999999999999999999999999999
Q ss_pred EEEeecCCCChHHHhhcCC-------------CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCce
Q 040826 137 LVYEFCAAGNLAQHLLRKD-------------SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP 203 (347)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~-------------~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~ 203 (347)
++|||+++++|.+++...+ ..+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLA---SQHFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeeccccccceEEEcCCCeE
Confidence 9999999999999986432 34788899999999999999999 8899999999999999999999
Q ss_pred EEeecccceecCCCccc-eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhh
Q 040826 204 KLSDFGLAKMLGMEESK-VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARD 281 (347)
Q Consensus 204 kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~ 281 (347)
+|+|||++......... ......++..|+|||.+.+..++.++||||||+++|+|++ |..||...... +. ...
T Consensus 162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~-~~----~~~ 236 (280)
T cd05049 162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE-EV----IEC 236 (280)
T ss_pred EECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH-HH----HHH
Confidence 99999998765322211 1223345778999999999999999999999999999998 99988643221 11 112
Q ss_pred hcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 040826 282 VSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDK 336 (347)
Q Consensus 282 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~ 336 (347)
+..+... .........+.+++.+||+.||++|||+.||++.|++
T Consensus 237 ~~~~~~~-----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 237 ITQGRLL-----------QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred HHcCCcC-----------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 2222111 0111233579999999999999999999999999863
No 69
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.9e-43 Score=302.97 Aligned_cols=246 Identities=25% Similarity=0.368 Sum_probs=209.1
Q ss_pred hcCcccCCeeeecCCeeEEEEE-eCCCCEEEEEEcccCCCh--h---HHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEE
Q 040826 65 INNDWDRRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNT--D---SFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLV 138 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~--~---~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 138 (347)
.-+|...+.||+|.||.|-++. ...|+.||||.+.++.-. + .+.+|+++|..|+||||+.++.+|++.+...+|
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 4467777889999999999999 578999999999876432 2 478999999999999999999999999999999
Q ss_pred EeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCc
Q 040826 139 YEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE 218 (347)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 218 (347)
|||..+|.|+||+...+ .+++.+++.+++||..|+.|+| .++++|||||.+|||+|.|+++||+|||++..+. +
T Consensus 132 MEYaS~GeLYDYiSer~-~LsErEaRhfFRQIvSAVhYCH---knrVvHRDLKLENILLD~N~NiKIADFGLSNly~--~ 205 (668)
T KOG0611|consen 132 MEYASGGELYDYISERG-SLSEREARHFFRQIVSAVHYCH---KNRVVHRDLKLENILLDQNNNIKIADFGLSNLYA--D 205 (668)
T ss_pred EEecCCccHHHHHHHhc-cccHHHHHHHHHHHHHHHHHHh---hccceecccchhheeecCCCCeeeeccchhhhhc--c
Confidence 99999999999996654 5999999999999999999999 8999999999999999999999999999998874 3
Q ss_pred cceeecccCCCCccccccccCCccC-CcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCC
Q 040826 219 SKVFTDVRGTIGYMDPEYMTNAKLT-CASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRL 297 (347)
Q Consensus 219 ~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 297 (347)
..-.+.++|++-|.+||++.|.+|. +.+|.||||++||-|+.|.-||.+ .+. ...++.+..|... +-
T Consensus 206 ~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG-~Dh----k~lvrQIs~GaYr--EP----- 273 (668)
T KOG0611|consen 206 KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDG-RDH----KRLVRQISRGAYR--EP----- 273 (668)
T ss_pred ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCC-chH----HHHHHHhhccccc--CC-----
Confidence 4446678999999999999999885 789999999999999999999973 222 2334444444321 11
Q ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 040826 298 NGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEI 334 (347)
Q Consensus 298 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l 334 (347)
..+....-|+.|||..||++|.|+.+|..+.
T Consensus 274 ------~~PSdA~gLIRwmLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 274 ------ETPSDASGLIRWMLMVNPERRATIEDIASHW 304 (668)
T ss_pred ------CCCchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence 1124578899999999999999999998764
No 70
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-43 Score=304.51 Aligned_cols=254 Identities=27% Similarity=0.349 Sum_probs=201.7
Q ss_pred HHHHHhcCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC----------------ChhHHHHHHHHhhcCCCCcc
Q 040826 60 EIENAINNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN----------------NTDSFSREVEGLSRVRHPNL 122 (347)
Q Consensus 60 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~----------------~~~~~~~e~~~l~~l~h~ni 122 (347)
+-....++|.....||+|.||.|-+|+. .+++.||+|++.+.. ..+...+|+.+|++++||||
T Consensus 91 ~~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nV 170 (576)
T KOG0585|consen 91 QDRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNV 170 (576)
T ss_pred ccceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCe
Confidence 3344578899999999999999999994 478999999996542 12367899999999999999
Q ss_pred eeeeeEEEe--CCeEEEEEeecCCCChHHHhhcCCCC-CCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecC
Q 040826 123 VCLFGCCVE--GGEQYLVYEFCAAGNLAQHLLRKDSV-LTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTE 199 (347)
Q Consensus 123 v~~~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~-~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~ 199 (347)
|+++++..+ .+.+|||+|||..|.+...= ...+ ++..+++++++++..||.||| .+||+||||||+|+|+++
T Consensus 171 V~LiEvLDDP~s~~~YlVley~s~G~v~w~p--~d~~els~~~Ar~ylrDvv~GLEYLH---~QgiiHRDIKPsNLLl~~ 245 (576)
T KOG0585|consen 171 VKLIEVLDDPESDKLYLVLEYCSKGEVKWCP--PDKPELSEQQARKYLRDVVLGLEYLH---YQGIIHRDIKPSNLLLSS 245 (576)
T ss_pred eEEEEeecCcccCceEEEEEeccCCccccCC--CCcccccHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEEcC
Confidence 999999876 46899999999998875422 2333 899999999999999999999 899999999999999999
Q ss_pred CCceEEeecccceecCCC----ccceeecccCCCCccccccccCC----ccCCcccHHHHHHHHHHHHhCCCCcCCChhh
Q 040826 200 KLEPKLSDFGLAKMLGME----ESKVFTDVRGTIGYMDPEYMTNA----KLTCASDIYSFGIVALQLLSGQKVIELDFDA 271 (347)
Q Consensus 200 ~~~~kl~dfg~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~----~~~~~~Dv~slG~il~~lltg~~p~~~~~~~ 271 (347)
+|.+||+|||.+...... .........||+.|+|||...++ ..+.+.||||+|++||-|+.|+.||..++..
T Consensus 246 ~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~ 325 (576)
T KOG0585|consen 246 DGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFEL 325 (576)
T ss_pred CCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHH
Confidence 999999999999866221 11223447899999999988763 2457899999999999999999999854332
Q ss_pred hhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 272 RDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
.....+....... +..++..+++.+|+.++|.+||+.|.+..+|..+
T Consensus 326 -----~l~~KIvn~pL~f----------P~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~H 372 (576)
T KOG0585|consen 326 -----ELFDKIVNDPLEF----------PENPEINEDLKDLIKRLLEKDPEQRITLPDIKLH 372 (576)
T ss_pred -----HHHHHHhcCcccC----------CCcccccHHHHHHHHHHhhcChhheeehhhheec
Confidence 2222222222111 1222445789999999999999999999998654
No 71
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=7.8e-42 Score=298.07 Aligned_cols=255 Identities=23% Similarity=0.320 Sum_probs=205.8
Q ss_pred cCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC-----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN-----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVY 139 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 139 (347)
++|...+.||+|+||.||+|.. .+++.||+|.+.... ....+.+|+.++++++|||++++++++.+.+..++++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 4677888999999999999995 478999999875422 1235788999999999999999999999999999999
Q ss_pred eecCCCChHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCC
Q 040826 140 EFCAAGNLAQHLLR---KDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM 216 (347)
Q Consensus 140 e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 216 (347)
||+++++|.+++.. ....+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++++|||.+.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 99999999988743 3455889999999999999999999 88999999999999999999999999999887542
Q ss_pred CccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCC
Q 040826 217 EESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPR 296 (347)
Q Consensus 217 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (347)
.. .......++..|+|||.+.+..++.++|+||||+++|+|++|+.|+........... ..+.....+ .
T Consensus 159 ~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~---~~~~~~~~~-------~ 227 (267)
T cd08228 159 KT-TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLC---QKIEQCDYP-------P 227 (267)
T ss_pred hh-HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHH---HHHhcCCCC-------C
Confidence 22 122234578899999999888889999999999999999999999865432222222 222111110 0
Q ss_pred CCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 040826 297 LNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKA 337 (347)
Q Consensus 297 l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~ 337 (347)
.........+.+++.+||+.+|++|||+.+|++.++.+
T Consensus 228 ---~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 228 ---LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred ---CChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 11123346799999999999999999999999999876
No 72
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.9e-42 Score=310.09 Aligned_cols=240 Identities=26% Similarity=0.303 Sum_probs=194.3
Q ss_pred CeeeecCCeeEEEEEe-CCCCEEEEEEcccCC-----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCCC
Q 040826 72 RFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN-----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 145 (347)
+.||+|+||.||++.. .+|..||+|.+.... ....+.+|+.+++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 3699999999999995 478999999986531 2345678999999999999999999999999999999999999
Q ss_pred ChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeecc
Q 040826 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDV 225 (347)
Q Consensus 146 sL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 225 (347)
+|.+++... ..+++..+..++.|++.||.||| +.|++||||||+|||++.++.++|+|||++..... ........
T Consensus 81 ~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~-~~~~~~~~ 155 (323)
T cd05595 81 ELFFHLSRE-RVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS-DGATMKTF 155 (323)
T ss_pred cHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEEcCCCCEEecccHHhccccC-CCCccccc
Confidence 999888554 45899999999999999999999 88999999999999999999999999999875321 12223345
Q ss_pred cCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHH
Q 040826 226 RGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRAD 305 (347)
Q Consensus 226 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 305 (347)
.|+..|+|||.+.+..++.++||||||+++|+|++|+.||...... . ....+...... ++...
T Consensus 156 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~-~----~~~~~~~~~~~------------~p~~~ 218 (323)
T cd05595 156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-R----LFELILMEEIR------------FPRTL 218 (323)
T ss_pred cCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH-H----HHHHHhcCCCC------------CCCCC
Confidence 6899999999999989999999999999999999999999743221 1 11111111111 11122
Q ss_pred HHHHHHHHHHhccCCCCCCC-----CHHHHHHH
Q 040826 306 FESILKIAVLCVAKSSKGRP-----TIDVVYEE 333 (347)
Q Consensus 306 ~~~l~~l~~~cl~~~p~~Rp-----s~~ei~~~ 333 (347)
..++.+++.+||+.||.+|| ++.++++.
T Consensus 219 ~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 219 SPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred CHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 35789999999999999998 78888753
No 73
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.5e-43 Score=312.22 Aligned_cols=248 Identities=27% Similarity=0.385 Sum_probs=211.1
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccC----CChhHHHHHHHHhhcCCCCcceeeeeEEEeCCe-EEEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKS----NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGE-QYLVY 139 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-~~lv~ 139 (347)
++|...+.+|+|+||.++.+..+ ++..+++|.+.-. ...+...+|+.+++++.||||+.+.+.+..++. .++||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 46777889999999999999854 6788999988643 234467899999999999999999999998887 99999
Q ss_pred eecCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCc
Q 040826 140 EFCAAGNLAQHLLRK-DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE 218 (347)
Q Consensus 140 e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 218 (347)
+|++||++.+.+... +..++++.+.+|+.|++.|+.||| ++.|.|||||+.||+++.++.++|+|||+++......
T Consensus 84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH---~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~ 160 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLH---ENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED 160 (426)
T ss_pred eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH---hhhhhcccchhhhhhccccCceeecchhhhhhcCCch
Confidence 999999999999654 478999999999999999999999 8899999999999999999999999999999886443
Q ss_pred cceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCC
Q 040826 219 SKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLN 298 (347)
Q Consensus 219 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 298 (347)
.......||+.|+.||.+.+.+|+.++|||||||.+|||++-+++|.... +......+..+. .
T Consensus 161 -~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~-----m~~Li~ki~~~~-----------~ 223 (426)
T KOG0589|consen 161 -SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASN-----MSELILKINRGL-----------Y 223 (426)
T ss_pred -hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccc-----hHHHHHHHhhcc-----------C
Confidence 23456789999999999999999999999999999999999999998432 222333332222 1
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 299 GNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 299 ~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
.+++.....++..|+..|++++|..||++.+++.+
T Consensus 224 ~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 224 SPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred CCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 13444566789999999999999999999999987
No 74
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=5e-42 Score=298.20 Aligned_cols=252 Identities=23% Similarity=0.380 Sum_probs=204.0
Q ss_pred hcCcccCCeeeecCCeeEEEEEeCCCCEEEEEEcccCC-ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecC
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCA 143 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 143 (347)
.++|...++||+|+||.||+|...+++.+|+|.+.... ....+.+|+.++++++|+|++++++++. .+..++++||++
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYME 83 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcCC
Confidence 34677788999999999999998889999999887643 3457889999999999999999999864 457899999999
Q ss_pred CCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcccee
Q 040826 144 AGNLAQHLLRK-DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVF 222 (347)
Q Consensus 144 ~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 222 (347)
+++|.+++... +..+++..+..++.|++.||.||| +.+++|+||+|+||++++++.++++|||++...........
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~ 160 (260)
T cd05067 84 NGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIE---RKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAR 160 (260)
T ss_pred CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccc
Confidence 99999988653 456899999999999999999999 88999999999999999999999999999987643222222
Q ss_pred ecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCC
Q 040826 223 TDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNI 301 (347)
Q Consensus 223 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 301 (347)
....++..|+|||.+.+..++.++|+||||+++|++++ |+.||...... ...... ..+... ..
T Consensus 161 ~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-~~~~~~----~~~~~~-----------~~ 224 (260)
T cd05067 161 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP-EVIQNL----ERGYRM-----------PR 224 (260)
T ss_pred cCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH-HHHHHH----HcCCCC-----------CC
Confidence 33446778999999988889999999999999999999 89888643321 111111 111100 01
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 040826 302 NRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDK 336 (347)
Q Consensus 302 ~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~ 336 (347)
......++.+++.+||+.+|++|||++++++.|++
T Consensus 225 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 225 PDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 11223579999999999999999999999999975
No 75
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=8.1e-42 Score=295.07 Aligned_cols=244 Identities=26% Similarity=0.378 Sum_probs=197.7
Q ss_pred eeeecCCeeEEEEEeCCCCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCCCChHH
Q 040826 73 FLGRGSAGLVYKGVLPSGQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQ 149 (347)
Q Consensus 73 ~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~ 149 (347)
+||+|+||.||+|...++..+++|.+..... ...+.+|++.+++++|||++++++++...+..++||||+++++|.+
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 81 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLS 81 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHH
Confidence 6999999999999987889999998876543 2357889999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeecccCCC
Q 040826 150 HLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTI 229 (347)
Q Consensus 150 ~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~ 229 (347)
++......+++..++.++.|++.+|.|+| +++++|+||+|+||+++.++.++|+|||++...............++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~ 158 (250)
T cd05085 82 FLRKKKDELKTKQLVKFALDAAAGMAYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPI 158 (250)
T ss_pred HHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCcc
Confidence 98766667899999999999999999999 889999999999999999999999999998764322221112223466
Q ss_pred CccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHHH
Q 040826 230 GYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFES 308 (347)
Q Consensus 230 ~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 308 (347)
.|+|||++.+..++.++|+||||+++|++++ |..||...... ... .....+... .........
T Consensus 159 ~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~-~~~----~~~~~~~~~-----------~~~~~~~~~ 222 (250)
T cd05085 159 KWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ-QAR----EQVEKGYRM-----------SCPQKCPDD 222 (250)
T ss_pred cccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH-HHH----HHHHcCCCC-----------CCCCCCCHH
Confidence 7999999988889999999999999999998 88888643221 111 111111110 011123357
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHHHHH
Q 040826 309 ILKIAVLCVAKSSKGRPTIDVVYEEID 335 (347)
Q Consensus 309 l~~l~~~cl~~~p~~Rps~~ei~~~l~ 335 (347)
+.+++.+||+.+|++|||+.++++.|.
T Consensus 223 ~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 223 VYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 999999999999999999999999875
No 76
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.6e-42 Score=315.88 Aligned_cols=259 Identities=20% Similarity=0.192 Sum_probs=197.8
Q ss_pred hcCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCCChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecC
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCA 143 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 143 (347)
..+|...+.||+|+||.||++.. .+++.||+|... ...+.+|++++++++||||+++++++......++++|++.
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~----~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~ 166 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ----RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK 166 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh----hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC
Confidence 35799999999999999999995 478999999653 2346789999999999999999999999999999999996
Q ss_pred CCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceee
Q 040826 144 AGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT 223 (347)
Q Consensus 144 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 223 (347)
++|.+++... ..+++..++.++.|++.||.||| +.+++||||||+||+++.++.++|+|||++............
T Consensus 167 -~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~ylH---~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~ 241 (391)
T PHA03212 167 -TDLYCYLAAK-RNIAICDILAIERSVLRAIQYLH---ENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYY 241 (391)
T ss_pred -CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccccccc
Confidence 5888888654 35889999999999999999999 789999999999999999999999999998754322222233
Q ss_pred cccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChh------hhhHHHHHHhhhcCCCCCcc-------
Q 040826 224 DVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFD------ARDQLTRKARDVSMGKRPIK------- 290 (347)
Q Consensus 224 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~------~~~~~~~~~~~~~~~~~~~~------- 290 (347)
...||..|+|||++.+..++.++||||||+++|+|++|..|+..... ....+...............
T Consensus 242 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~ 321 (391)
T PHA03212 242 GWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANL 321 (391)
T ss_pred cccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHH
Confidence 45799999999999998999999999999999999999987653211 11122222111100000000
Q ss_pred ----------cccCCCCCCC--CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 291 ----------DFEDPRLNGN--INRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 291 ----------~~~~~~l~~~--~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
....+..... .......++.+|+.+||+.||.+|||+.|+++
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 322 DEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred HHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000000000 00123457899999999999999999999985
No 77
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=6.1e-42 Score=302.16 Aligned_cols=257 Identities=25% Similarity=0.385 Sum_probs=204.4
Q ss_pred cCcccCCeeeecCCeeEEEEEeC------CCCEEEEEEcccCCC--hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP------SGQVVAIKHIYKSNN--TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYL 137 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 137 (347)
.+|...+.||+|+||.||++... ++..+++|.+..... ...+.+|++++++++|||++++++++...+..++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 45677788999999999999842 345689998865433 3468899999999999999999999999999999
Q ss_pred EEeecCCCChHHHhhcCC------------CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEE
Q 040826 138 VYEFCAAGNLAQHLLRKD------------SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205 (347)
Q Consensus 138 v~e~~~~gsL~~~l~~~~------------~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl 205 (347)
++||+++++|.+++.... ..+++..++.++.|++.||+||| +.|++||||||+||++++++.++|
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH---~~~i~H~dlkp~Nili~~~~~~kl 161 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKI 161 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCCcEEe
Confidence 999999999999986432 34899999999999999999999 889999999999999999999999
Q ss_pred eecccceecCCCcc-ceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhc
Q 040826 206 SDFGLAKMLGMEES-KVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVS 283 (347)
Q Consensus 206 ~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~ 283 (347)
+|||++........ .......++..|+|||.+.+..++.++|+||||+++|+|++ |..||...... +... .+.
T Consensus 162 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~-~~~~----~i~ 236 (288)
T cd05093 162 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN-EVIE----CIT 236 (288)
T ss_pred ccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-HHHH----HHH
Confidence 99999876532221 11222345778999999998889999999999999999998 88887643221 1111 122
Q ss_pred CCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 040826 284 MGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWKNT 341 (347)
Q Consensus 284 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~~~ 341 (347)
.+... .... ....++.+++.+||+.||.+|||+.++.+.|+++.+..
T Consensus 237 ~~~~~-------~~~~----~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~~ 283 (288)
T cd05093 237 QGRVL-------QRPR----TCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKAS 283 (288)
T ss_pred cCCcC-------CCCC----CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHhc
Confidence 22111 0011 12356999999999999999999999999999997654
No 78
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=2.5e-42 Score=313.13 Aligned_cols=246 Identities=26% Similarity=0.398 Sum_probs=192.0
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
++|...+.||+|+||.||+|... +|+.||+|.+..... ...+.+|+++++.++|+||+++++++...+..++||||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence 34455678999999999999954 789999999865433 34688999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccce
Q 040826 142 CAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKV 221 (347)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 221 (347)
+++++|.+. ....+..+..++.|++.||.||| +.+++||||||+|||+++++.+||+|||++...... ...
T Consensus 154 ~~~~~L~~~-----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~-~~~ 224 (353)
T PLN00034 154 MDGGSLEGT-----HIADEQFLADVARQILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQT-MDP 224 (353)
T ss_pred CCCCccccc-----ccCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEcccccceecccc-ccc
Confidence 999998653 23567778899999999999999 889999999999999999999999999999875422 112
Q ss_pred eecccCCCCccccccccC-----CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCC
Q 040826 222 FTDVRGTIGYMDPEYMTN-----AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPR 296 (347)
Q Consensus 222 ~~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (347)
.....|+..|+|||.+.. ...+.++|||||||++|+|++|+.||...... ..............+
T Consensus 225 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~--~~~~~~~~~~~~~~~-------- 294 (353)
T PLN00034 225 CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQG--DWASLMCAICMSQPP-------- 294 (353)
T ss_pred ccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc--cHHHHHHHHhccCCC--------
Confidence 234568999999998743 23456899999999999999999999732211 111111111111110
Q ss_pred CCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 297 LNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 297 l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
........++.+|+.+||+.||++|||+.|++++
T Consensus 295 ---~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 295 ---EAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred ---CCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1111233579999999999999999999999874
No 79
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=4e-42 Score=308.57 Aligned_cols=240 Identities=25% Similarity=0.304 Sum_probs=195.2
Q ss_pred CeeeecCCeeEEEEEe-CCCCEEEEEEcccCC-----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCCC
Q 040826 72 RFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN-----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 145 (347)
+.||+|+||.||++.. .+|+.||+|.+.... ....+.+|+.+++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 3599999999999995 468999999987532 2346778999999999999999999999999999999999999
Q ss_pred ChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeecc
Q 040826 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDV 225 (347)
Q Consensus 146 sL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 225 (347)
+|.+++... ..+++..+..++.|++.||.||| +.+++||||||+|||++.++.+||+|||++...... .......
T Consensus 81 ~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~-~~~~~~~ 155 (328)
T cd05593 81 ELFFHLSRE-RVFSEDRTRFYGAEIVSALDYLH---SGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD-AATMKTF 155 (328)
T ss_pred CHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeEECCCCcEEEecCcCCccCCCc-ccccccc
Confidence 999888554 45899999999999999999999 889999999999999999999999999998753221 2223345
Q ss_pred cCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHH
Q 040826 226 RGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRAD 305 (347)
Q Consensus 226 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 305 (347)
.|+..|+|||.+.+..++.++||||||+++|+|++|+.||...... .....+....... +...
T Consensus 156 ~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~-----~~~~~~~~~~~~~------------p~~~ 218 (328)
T cd05593 156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KLFELILMEDIKF------------PRTL 218 (328)
T ss_pred cCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH-----HHHHHhccCCccC------------CCCC
Confidence 6899999999999889999999999999999999999999743221 1111221111111 1122
Q ss_pred HHHHHHHHHHhccCCCCCCC-----CHHHHHHH
Q 040826 306 FESILKIAVLCVAKSSKGRP-----TIDVVYEE 333 (347)
Q Consensus 306 ~~~l~~l~~~cl~~~p~~Rp-----s~~ei~~~ 333 (347)
..++.+++.+||+.||.+|| ++.++++.
T Consensus 219 ~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 219 SADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred CHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 35789999999999999997 88988764
No 80
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=1.1e-41 Score=299.24 Aligned_cols=256 Identities=24% Similarity=0.388 Sum_probs=200.8
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCC----EEEEEEcccCCCh---hHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQ----VVAIKHIYKSNNT---DSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYL 137 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~~~---~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 137 (347)
.+|...+.||+|+||.||+|.+. +|+ .+++|.+...... ..+..|+..+++++||||+++++++. ....++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEE
Confidence 35666788999999999999953 454 4778877544332 35667777889999999999999875 456788
Q ss_pred EEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCC
Q 040826 138 VYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217 (347)
Q Consensus 138 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 217 (347)
++||+++|+|.+++......+++..+..++.|++.||.||| +.+++|+||||+||++++++.+||+|||++......
T Consensus 86 i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLE---EHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPD 162 (279)
T ss_pred EEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEEcCCccceeccCC
Confidence 99999999999999876677999999999999999999999 789999999999999999999999999999865322
Q ss_pred ccc-eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCC
Q 040826 218 ESK-VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDP 295 (347)
Q Consensus 218 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (347)
... ......++..|+|||.+.+..++.++||||||+++||+++ |..||...... ....... .+.... .+
T Consensus 163 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--~~~~~~~---~~~~~~----~~ 233 (279)
T cd05111 163 DKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH--EVPDLLE---KGERLA----QP 233 (279)
T ss_pred CcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHH---CCCcCC----CC
Confidence 211 1223456778999999998889999999999999999998 88888643221 1111111 111110 01
Q ss_pred CCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 040826 296 RLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWKNT 341 (347)
Q Consensus 296 ~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~~~ 341 (347)
. .+...+.+++.+||+.||.+|||+.|+++.|+.+.++.
T Consensus 234 ~-------~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~ 272 (279)
T cd05111 234 Q-------ICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDP 272 (279)
T ss_pred C-------CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCC
Confidence 1 12356888999999999999999999999999987654
No 81
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=9.5e-42 Score=296.47 Aligned_cols=251 Identities=26% Similarity=0.385 Sum_probs=201.4
Q ss_pred cCcccCCeeeecCCeeEEEEEeCCCCEEEEEEcccCC-ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCC
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAA 144 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 144 (347)
++|...+.||+|++|.||++...++..+++|.+.... ....+.+|+.++++++|+|++++++++. .+..+++|||+++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~ 84 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGK 84 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCC
Confidence 4567778899999999999998777789999886543 3457889999999999999999999875 4568899999999
Q ss_pred CChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceee
Q 040826 145 GNLAQHLLRK-DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT 223 (347)
Q Consensus 145 gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 223 (347)
++|.+++... ...+++..+..++.|++.||.||| +.+++|+||+|+||++++++.++|+|||.+............
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~ 161 (260)
T cd05069 85 GSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIE---RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQ 161 (260)
T ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCeEEECCCccceEccCCcccccC
Confidence 9999999653 345899999999999999999999 789999999999999999999999999999865433222222
Q ss_pred cccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCC
Q 040826 224 DVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNIN 302 (347)
Q Consensus 224 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 302 (347)
...++..|+|||...+..++.++|+||||+++|+|++ |..||...... ...... ..+... ...
T Consensus 162 ~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-~~~~~~----~~~~~~-----------~~~ 225 (260)
T cd05069 162 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR-EVLEQV----ERGYRM-----------PCP 225 (260)
T ss_pred CCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHH----HcCCCC-----------CCC
Confidence 3346678999999988889999999999999999999 88887643221 111111 111100 111
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 040826 303 RADFESILKIAVLCVAKSSKGRPTIDVVYEEIDK 336 (347)
Q Consensus 303 ~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~ 336 (347)
...+..+.+++.+||++||.+||++++|++.|++
T Consensus 226 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 226 QGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred cccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 2334679999999999999999999999999975
No 82
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=3.4e-42 Score=310.06 Aligned_cols=243 Identities=26% Similarity=0.264 Sum_probs=198.1
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-C-CCEEEEEEcccC-----CChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-S-GQVVAIKHIYKS-----NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLV 138 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~-~~~vavK~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 138 (347)
++|...+.||+|+||.||+|... + +..||+|.+... .....+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 46777889999999999999854 3 368999988643 2334678899999999999999999999999999999
Q ss_pred EeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCc
Q 040826 139 YEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE 218 (347)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 218 (347)
|||+++|+|.+++... ..+++..+..++.|++.||.||| +.+++||||||+|||++.++.++|+|||++......
T Consensus 110 ~Ey~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~- 184 (340)
T PTZ00426 110 LEFVIGGEFFTFLRRN-KRFPNDVGCFYAAQIVLIFEYLQ---SLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR- 184 (340)
T ss_pred EeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCC-
Confidence 9999999999998654 35899999999999999999999 889999999999999999999999999999865321
Q ss_pred cceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCC
Q 040826 219 SKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLN 298 (347)
Q Consensus 219 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 298 (347)
.....||+.|+|||++.+..++.++|+|||||++|+|++|..||...... .....+..+.....
T Consensus 185 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~-----~~~~~i~~~~~~~p-------- 248 (340)
T PTZ00426 185 ---TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL-----LIYQKILEGIIYFP-------- 248 (340)
T ss_pred ---cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH-----HHHHHHhcCCCCCC--------
Confidence 22346899999999999988999999999999999999999999754221 11122222221111
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHH
Q 040826 299 GNINRADFESILKIAVLCVAKSSKGRP-----TIDVVYEE 333 (347)
Q Consensus 299 ~~~~~~~~~~l~~l~~~cl~~~p~~Rp-----s~~ei~~~ 333 (347)
... ...+.+++.+||+.||.+|+ |++++++.
T Consensus 249 ~~~----~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 249 KFL----DNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred CCC----CHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 112 24678999999999999995 88888764
No 83
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=8.5e-42 Score=295.99 Aligned_cols=250 Identities=25% Similarity=0.439 Sum_probs=202.8
Q ss_pred cCcccCCeeeecCCeeEEEEEeCCCCEEEEEEcccCC-ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCC
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAA 144 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 144 (347)
.+|...+.||+|+||.||++.+.++..+++|.+.... ....+.+|++++++++|||++++++++......++++||+++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 83 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEH 83 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCC
Confidence 3566678899999999999998778899999887543 346788999999999999999999999998999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeec
Q 040826 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD 224 (347)
Q Consensus 145 gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 224 (347)
++|.+++......+++..+..++.|++.++++|| +.+++|+||+|+||+++.++.++|+|||++.............
T Consensus 84 ~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~ 160 (256)
T cd05112 84 GCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLE---SSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTG 160 (256)
T ss_pred CcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccccceEEEcCCCeEEECCCcceeecccCcccccCC
Confidence 9999999766667899999999999999999999 7899999999999999999999999999988654322222223
Q ss_pred ccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCH
Q 040826 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINR 303 (347)
Q Consensus 225 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 303 (347)
..++..|+|||.+.+..++.++|+||||+++|+|++ |..||...... . .......+... ..+.
T Consensus 161 ~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-~----~~~~~~~~~~~----~~~~------- 224 (256)
T cd05112 161 TKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS-E----VVETINAGFRL----YKPR------- 224 (256)
T ss_pred CccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH-H----HHHHHhCCCCC----CCCC-------
Confidence 345678999999998889999999999999999998 88888643211 1 11111111110 1111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 040826 304 ADFESILKIAVLCVAKSSKGRPTIDVVYEEI 334 (347)
Q Consensus 304 ~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l 334 (347)
.....+.+++.+||+.+|++|||+.++++.|
T Consensus 225 ~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 225 LASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred CCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 1235799999999999999999999999886
No 84
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.1e-41 Score=294.70 Aligned_cols=245 Identities=24% Similarity=0.375 Sum_probs=195.0
Q ss_pred CeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCCCCh
Q 040826 72 RFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNL 147 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 147 (347)
+.||+|+||.||+|... +|+.+++|.+..... ...+.+|++++++++||||+++++++......++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 35999999999999964 789999998765432 34688999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcccee-eccc
Q 040826 148 AQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVF-TDVR 226 (347)
Q Consensus 148 ~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~-~~~~ 226 (347)
.+++......+++..++.++.|+++||.||| +.+++|+||+|+||+++.++.++|+|||++........... ....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 157 (252)
T cd05084 81 LTFLRTEGPRLKVKELIQMVENAAAGMEYLE---SKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQ 157 (252)
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCC
Confidence 9999766667899999999999999999999 88999999999999999999999999999875432111111 1112
Q ss_pred CCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHH
Q 040826 227 GTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRAD 305 (347)
Q Consensus 227 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 305 (347)
.+..|+|||.+.+..++.++|+||||+++|+|++ |..|+...... ....... ..... ..+...
T Consensus 158 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~-~~~~~~~----~~~~~-----------~~~~~~ 221 (252)
T cd05084 158 IPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ-QTREAIE----QGVRL-----------PCPELC 221 (252)
T ss_pred CceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH-HHHHHHH----cCCCC-----------CCcccC
Confidence 3457999999998889999999999999999998 77777532211 1111111 11100 111123
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 040826 306 FESILKIAVLCVAKSSKGRPTIDVVYEEID 335 (347)
Q Consensus 306 ~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~ 335 (347)
+..+.+++.+||+.+|++|||+.++++.|+
T Consensus 222 ~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 222 PDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 457999999999999999999999999875
No 85
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=8.9e-42 Score=296.72 Aligned_cols=253 Identities=26% Similarity=0.396 Sum_probs=206.3
Q ss_pred hcCcccCCeeeecCCeeEEEEEeCCCCEEEEEEcccC-CChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecC
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKS-NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCA 143 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 143 (347)
.++|...+.||+|+||.||++..+++..+++|.+... .....+.+|+..+++++|+|++++++++......+++|||++
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 84 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMS 84 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccC
Confidence 4567788899999999999999888889999998764 335678999999999999999999999998889999999999
Q ss_pred CCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcccee
Q 040826 144 AGNLAQHLLRKD-SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVF 222 (347)
Q Consensus 144 ~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 222 (347)
+++|.+++.... ..+++..+..++.|++.|+.||| +++++|+||+|+||++++++.++++|||.+...........
T Consensus 85 ~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~ 161 (261)
T cd05034 85 KGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLE---SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAR 161 (261)
T ss_pred CCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcchheEEEcCCCCEEECccccceeccchhhhhh
Confidence 999999997643 56899999999999999999999 78999999999999999999999999999887643222222
Q ss_pred ecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCC
Q 040826 223 TDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNI 301 (347)
Q Consensus 223 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 301 (347)
.....+..|+|||.+.+..++.++|+||||++++++++ |+.||.... ............. . ..
T Consensus 162 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~-~~~~~~~~~~~~~---~------------~~ 225 (261)
T cd05034 162 EGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMT-NREVLEQVERGYR---M------------PR 225 (261)
T ss_pred hccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHHcCCC---C------------CC
Confidence 23335678999999998889999999999999999998 888885432 2222222211110 0 01
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 040826 302 NRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDK 336 (347)
Q Consensus 302 ~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~ 336 (347)
+...+.++.+++.+||+.+|.+||+++++.+.|+.
T Consensus 226 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 226 PPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 11123579999999999999999999999999875
No 86
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=9.6e-42 Score=301.34 Aligned_cols=256 Identities=24% Similarity=0.369 Sum_probs=204.4
Q ss_pred cCcccCCeeeecCCeeEEEEEeC------CCCEEEEEEcccCCC--hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP------SGQVVAIKHIYKSNN--TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYL 137 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 137 (347)
.+|...+.||+|+||.||+|... ++..+++|.+..... ...+.+|+..+++++|+||+++++++......++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 35666788999999999999732 345688998865443 2468899999999999999999999999999999
Q ss_pred EEeecCCCChHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCc
Q 040826 138 VYEFCAAGNLAQHLLRKD---------------SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLE 202 (347)
Q Consensus 138 v~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~ 202 (347)
||||+++++|.+++.... ..+++..++.++.|++.|++||| +++++|+||||+||++++++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA---SQHFVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCCc
Confidence 999999999999986432 34789999999999999999999 889999999999999999999
Q ss_pred eEEeecccceecCCCccc-eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHh
Q 040826 203 PKLSDFGLAKMLGMEESK-VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKAR 280 (347)
Q Consensus 203 ~kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~ 280 (347)
++|+|||++......... ......++..|+|||.+.+..++.++||||||+++|+|++ |..||....... ...
T Consensus 162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-----~~~ 236 (291)
T cd05094 162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE-----VIE 236 (291)
T ss_pred EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHH
Confidence 999999998765332211 1223446788999999998899999999999999999999 888876432211 111
Q ss_pred hhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 040826 281 DVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWKN 340 (347)
Q Consensus 281 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~~ 340 (347)
....+... ......+..+.+++.+||+.+|++|||+.+|++.|+++.+.
T Consensus 237 ~~~~~~~~-----------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 237 CITQGRVL-----------ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred HHhCCCCC-----------CCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 12211111 00112335799999999999999999999999999999654
No 87
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.3e-41 Score=295.19 Aligned_cols=245 Identities=28% Similarity=0.431 Sum_probs=195.7
Q ss_pred eeecCCeeEEEEEeC---CCCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCCCCh
Q 040826 74 LGRGSAGLVYKGVLP---SGQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNL 147 (347)
Q Consensus 74 lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 147 (347)
||+|+||.||+|.+. ++..||+|.+..... .+.+.+|+.++++++||||+++++++. ....++||||+++++|
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~L 81 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGPL 81 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCCH
Confidence 899999999999753 355799998876533 245889999999999999999999875 4578999999999999
Q ss_pred HHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccce--eecc
Q 040826 148 AQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKV--FTDV 225 (347)
Q Consensus 148 ~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~--~~~~ 225 (347)
.+++......+++..+++++.|++.||.||| +.+++|+||||+||+++.++.++|+|||++.......... ....
T Consensus 82 ~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 158 (257)
T cd05115 82 NKFLSGKKDEITVSNVVELMHQVSMGMKYLE---GKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAG 158 (257)
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCC
Confidence 9999766667999999999999999999999 7899999999999999999999999999987654322211 1112
Q ss_pred cCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHH
Q 040826 226 RGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRA 304 (347)
Q Consensus 226 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 304 (347)
.++..|+|||.+.+..++.++|+||||+++|++++ |..||...... + ....+..+... ..+..
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-~----~~~~~~~~~~~-----------~~~~~ 222 (257)
T cd05115 159 KWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP-E----VMSFIEQGKRL-----------DCPAE 222 (257)
T ss_pred CCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH-H----HHHHHHCCCCC-----------CCCCC
Confidence 23578999999988889999999999999999996 88888643221 1 11222222111 11123
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 040826 305 DFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAW 338 (347)
Q Consensus 305 ~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~ 338 (347)
+.+++.+++.+||+.+|++||++.+|.+.|+.++
T Consensus 223 ~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~~ 256 (257)
T cd05115 223 CPPEMYALMKDCWIYKWEDRPNFAKVEERMRTYY 256 (257)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhhc
Confidence 3468999999999999999999999999998763
No 88
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=3e-42 Score=310.18 Aligned_cols=250 Identities=27% Similarity=0.312 Sum_probs=196.7
Q ss_pred CcccCCeeeecCCeeEEEEEe----CCCCEEEEEEcccC------CChhHHHHHHHHhhcC-CCCcceeeeeEEEeCCeE
Q 040826 67 NDWDRRFLGRGSAGLVYKGVL----PSGQVVAIKHIYKS------NNTDSFSREVEGLSRV-RHPNLVCLFGCCVEGGEQ 135 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~------~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 135 (347)
+|...+.||+|+||.||++.. .+|+.||+|.+... .....+..|+.+++.+ +|+||+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 366778899999999999874 36889999998642 1234577899999999 599999999999999999
Q ss_pred EEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecC
Q 040826 136 YLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLG 215 (347)
Q Consensus 136 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 215 (347)
++||||+++|+|.+++... ..+++..+..++.|++.||.||| +.+++||||||+|||++.++.++|+|||++....
T Consensus 81 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~ 156 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQR-DNFSEDEVRFYSGEIILALEHLH---KLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFL 156 (332)
T ss_pred EEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHeEECCCCCEEEeeCcCCcccc
Confidence 9999999999999988654 35899999999999999999999 8899999999999999999999999999988654
Q ss_pred CCccceeecccCCCCccccccccCC-ccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccC
Q 040826 216 MEESKVFTDVRGTIGYMDPEYMTNA-KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFED 294 (347)
Q Consensus 216 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (347)
...........||..|+|||.+.+. .++.++||||||+++|+|++|+.||........ .......+.....+
T Consensus 157 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-~~~~~~~~~~~~~~------ 229 (332)
T cd05614 157 SEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT-QSEVSRRILKCDPP------ 229 (332)
T ss_pred ccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC-HHHHHHHHhcCCCC------
Confidence 3333333345689999999999865 478899999999999999999999964322111 11111222111111
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHH
Q 040826 295 PRLNGNINRADFESILKIAVLCVAKSSKGRP-----TIDVVYEE 333 (347)
Q Consensus 295 ~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rp-----s~~ei~~~ 333 (347)
+... ....+.+++.+||+.||++|| ++.++++.
T Consensus 230 --~~~~----~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 230 --FPSF----IGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred --CCCC----CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 1112 235688999999999999999 66777653
No 89
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=4e-42 Score=292.38 Aligned_cols=261 Identities=24% Similarity=0.316 Sum_probs=205.9
Q ss_pred CcccCCeeeecCCeeEEEEE-eCCCCEEEEEEcccCCC----hhHHHHHHHHhhcCCCCc-ceeeeeEEEeCC------e
Q 040826 67 NDWDRRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNN----TDSFSREVEGLSRVRHPN-LVCLFGCCVEGG------E 134 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~------~ 134 (347)
.|...++||+|.||.||+|. ..+|+.||+|++.-..+ .....+|+.++++++|+| |+.+++++.+.+ .
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~ 91 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK 91 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence 34455679999999999999 55789999999875433 346789999999999999 999999998877 8
Q ss_pred EEEEEeecCCCChHHHhhcCC---CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccc
Q 040826 135 QYLVYEFCAAGNLAQHLLRKD---SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLA 211 (347)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~ 211 (347)
.++||||++. +|.+++.... ..++...+..++.|++.||+||| +++|+||||||.||+|+++|.+||+|||++
T Consensus 92 l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H---~~~IlHRDLKPQNlLi~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 92 LYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLH---SHGILHRDLKPQNLLISSSGVLKLADFGLA 167 (323)
T ss_pred EEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCcceEEECCCCcEeeeccchH
Confidence 8999999988 9999997654 35777889999999999999999 899999999999999999999999999999
Q ss_pred eecCCCccceeecccCCCCccccccccCC-ccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCC-Cc
Q 040826 212 KMLGMEESKVFTDVRGTIGYMDPEYMTNA-KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKR-PI 289 (347)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~ 289 (347)
+.... +....+..++|..|.|||++.+. .|+...|+||+|||+.||+++++.|.+..+ .+++..+.+....... ..
T Consensus 168 ra~~i-p~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se-~~ql~~If~~lGtP~e~~W 245 (323)
T KOG0594|consen 168 RAFSI-PMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE-IDQLFRIFRLLGTPNEKDW 245 (323)
T ss_pred HHhcC-CcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH-HHHHHHHHHHcCCCCccCC
Confidence 96542 23335566789999999999876 799999999999999999999988876554 5555555554432210 00
Q ss_pred c---cc-----cCCCCC--CCCCH---HHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 290 K---DF-----EDPRLN--GNINR---ADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 290 ~---~~-----~~~~l~--~~~~~---~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
+ .+ ..+... ..... ....+..+++.+||+.+|.+|.|+..++++
T Consensus 246 p~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 246 PGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 0 00 001111 00111 111478899999999999999999999875
No 90
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.1e-41 Score=303.25 Aligned_cols=261 Identities=23% Similarity=0.341 Sum_probs=205.8
Q ss_pred cCcccCCeeeecCCeeEEEEEeC--------CCCEEEEEEcccCCC---hhHHHHHHHHhhcC-CCCcceeeeeEEEeCC
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP--------SGQVVAIKHIYKSNN---TDSFSREVEGLSRV-RHPNLVCLFGCCVEGG 133 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~---~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 133 (347)
++|...+.||+|+||.||++... ++..+|+|.+..... ...+.+|+.+++++ +|||++++++++...+
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 56778889999999999999742 235799999876432 23577899999999 7999999999999999
Q ss_pred eEEEEEeecCCCChHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEec
Q 040826 134 EQYLVYEFCAAGNLAQHLLRKD---------------SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLT 198 (347)
Q Consensus 134 ~~~lv~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~ 198 (347)
..+++|||+++|+|.+++.... ..+++..++.++.|++.||+||| +.|++|+||||+||+++
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nill~ 174 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVT 174 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHHheEEc
Confidence 9999999999999999996432 34888999999999999999999 78999999999999999
Q ss_pred CCCceEEeecccceecCCCccc-eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHH
Q 040826 199 EKLEPKLSDFGLAKMLGMEESK-VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLT 276 (347)
Q Consensus 199 ~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~ 276 (347)
.++.++|+|||.+......... ......++..|+|||.+.+..++.++|+||||+++|+|++ |..||.... . ..
T Consensus 175 ~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~-~-~~-- 250 (307)
T cd05098 175 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP-V-EE-- 250 (307)
T ss_pred CCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC-H-HH--
Confidence 9999999999998765321111 1111234568999999998889999999999999999998 777775322 1 11
Q ss_pred HHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhhhhh
Q 040826 277 RKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWKNTMVEM 345 (347)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~~~~~~~ 345 (347)
.......+... ..+.....++.+++.+||+.+|++|||+.+|++.|++++....++|
T Consensus 251 -~~~~~~~~~~~-----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~~~~~ 307 (307)
T cd05098 251 -LFKLLKEGHRM-----------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALTSNQE 307 (307)
T ss_pred -HHHHHHcCCCC-----------CCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHhhcCC
Confidence 11111111110 1111233579999999999999999999999999999998876654
No 91
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.9e-41 Score=304.78 Aligned_cols=198 Identities=28% Similarity=0.382 Sum_probs=171.9
Q ss_pred hcCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEe
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYE 140 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 140 (347)
.++|...+.||+|+||.||++... +|..+++|.+..... ...+.+|+++++.++||||+++++++.+++..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 367888899999999999999965 688899998765432 2468899999999999999999999999999999999
Q ss_pred ecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccc
Q 040826 141 FCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220 (347)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 220 (347)
|+++++|.+++... ..+++..+..++.|++.||.|||+ ..+++|+||||+||+++.++.++|+|||++..... .
T Consensus 84 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~--~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~---~ 157 (333)
T cd06650 84 HMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---S 157 (333)
T ss_pred cCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhh---h
Confidence 99999999998654 358899999999999999999994 24799999999999999999999999999875432 1
Q ss_pred eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCC
Q 040826 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELD 268 (347)
Q Consensus 221 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~ 268 (347)
......++..|+|||.+.+..++.++|+||||+++|+|++|+.||...
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~ 205 (333)
T cd06650 158 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPP 205 (333)
T ss_pred ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 223346889999999999888999999999999999999999998754
No 92
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=8.7e-42 Score=320.59 Aligned_cols=246 Identities=20% Similarity=0.251 Sum_probs=198.5
Q ss_pred cccCCeeeecCCeeEEEEEeC-C-CCEEEEEEcccCCC--hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecC
Q 040826 68 DWDRRFLGRGSAGLVYKGVLP-S-GQVVAIKHIYKSNN--TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCA 143 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~~-~-~~~vavK~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 143 (347)
|...+.||+|++|.||++... + ++.|++|.+..... ...+.+|+.+++.++||||+++++++...+..++||||++
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~ 148 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGS 148 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCC
Confidence 777889999999999999843 3 67888887654432 2357789999999999999999999999999999999999
Q ss_pred CCChHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcc-
Q 040826 144 AGNLAQHLLR---KDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES- 219 (347)
Q Consensus 144 ~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~- 219 (347)
+|+|.+++.+ ....+++..+..++.|++.||.||| +.+++||||||+|||++.++.+||+|||++........
T Consensus 149 gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~ 225 (478)
T PTZ00267 149 GGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVH---SRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSL 225 (478)
T ss_pred CCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcccc
Confidence 9999998753 2456899999999999999999999 88999999999999999999999999999987643222
Q ss_pred ceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCC
Q 040826 220 KVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNG 299 (347)
Q Consensus 220 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 299 (347)
.......||+.|+|||++.+..++.++|||||||++|+|++|+.||...... ........+...
T Consensus 226 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~-----~~~~~~~~~~~~----------- 289 (478)
T PTZ00267 226 DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQR-----EIMQQVLYGKYD----------- 289 (478)
T ss_pred ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHhCCCC-----------
Confidence 1233456899999999999989999999999999999999999998743221 111122111111
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 300 NINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 300 ~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
..+.....++.+++.+||+.||++|||+.+++.
T Consensus 290 ~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 290 PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred CCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 011122357999999999999999999999875
No 93
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1e-41 Score=301.04 Aligned_cols=259 Identities=24% Similarity=0.305 Sum_probs=194.7
Q ss_pred CcccCCeeeecCCeeEEEEEe-C-CCCEEEEEEcccCCC----hhHHHHHHHHhhcC---CCCcceeeeeEEEe-----C
Q 040826 67 NDWDRRFLGRGSAGLVYKGVL-P-SGQVVAIKHIYKSNN----TDSFSREVEGLSRV---RHPNLVCLFGCCVE-----G 132 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~-~-~~~~vavK~~~~~~~----~~~~~~e~~~l~~l---~h~niv~~~~~~~~-----~ 132 (347)
+|...+.||+|+||.||+|.. . +|+.||+|.+..... ...+.+|+.+++.+ +||||+++++++.. .
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 677888999999999999985 2 468899998865322 23566777777665 69999999998852 4
Q ss_pred CeEEEEEeecCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccc
Q 040826 133 GEQYLVYEFCAAGNLAQHLLRK-DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLA 211 (347)
Q Consensus 133 ~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~ 211 (347)
...+++|||+++ +|.+++... ...+++..+..++.|++.||.||| +.+++||||||+||+++.++.++|+|||++
T Consensus 82 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~ 157 (290)
T cd07862 82 TKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLA 157 (290)
T ss_pred CcEEEEEccCCC-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEcCCCCEEEccccce
Confidence 568999999975 999988653 345899999999999999999999 889999999999999999999999999999
Q ss_pred eecCCCccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCC-Ccc
Q 040826 212 KMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKR-PIK 290 (347)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~ 290 (347)
...... .......++..|+|||.+.+..++.++||||||+++|+|++|++||...... +.+............ ...
T Consensus 158 ~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~-~~~~~i~~~~~~~~~~~~~ 234 (290)
T cd07862 158 RIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKILDVIGLPGEEDWP 234 (290)
T ss_pred EeccCC--cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHH-HHHHHHHHHhCCCChhhch
Confidence 875422 2233456899999999998888999999999999999999999999754332 222222222111000 000
Q ss_pred c-------ccCCCCC---CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 291 D-------FEDPRLN---GNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 291 ~-------~~~~~l~---~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
. ...+... ..+.....+.+.+|+.+||+.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 235 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 0 0000000 0011123457889999999999999999999985
No 94
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=1e-41 Score=300.03 Aligned_cols=264 Identities=23% Similarity=0.336 Sum_probs=199.7
Q ss_pred ccCCeeeecCCeeEEEEEe-----CCCCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeC--CeEEEE
Q 040826 69 WDRRFLGRGSAGLVYKGVL-----PSGQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEG--GEQYLV 138 (347)
Q Consensus 69 ~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv 138 (347)
...+.||+|+||.||++.. .++..||+|.+..... ...+.+|++++++++|||++++++++... ...+++
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 6778899999999988753 3577899999876432 45678999999999999999999987653 468999
Q ss_pred EeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCc
Q 040826 139 YEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE 218 (347)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 218 (347)
|||+++++|.+++... .+++..+..++.|++.|+.||| +++++|+||||+||++++++.++|+|||++.......
T Consensus 87 ~e~~~~~~l~~~~~~~--~l~~~~~~~i~~~l~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 161 (283)
T cd05080 87 MEYVPLGSLRDYLPKH--KLNLAQLLLFAQQICEGMAYLH---SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH 161 (283)
T ss_pred ecCCCCCCHHHHHHHc--CCCHHHHHHHHHHHHHHHHHHH---HCCeeccccChheEEEcCCCcEEEeecccccccCCcc
Confidence 9999999999998543 4899999999999999999999 8899999999999999999999999999988654222
Q ss_pred cc--eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCC
Q 040826 219 SK--VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPR 296 (347)
Q Consensus 219 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (347)
.. ......++..|+|||.+.+..++.++||||||+++|+|++|..|+................ ...........+..
T Consensus 162 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 240 (283)
T cd05080 162 EYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQG-QMTVVRLIELLERG 240 (283)
T ss_pred hhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhccccc-ccchhhhhhhhhcC
Confidence 11 1122235667999999988889999999999999999999999876432111110000000 00000011111111
Q ss_pred CCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 040826 297 LNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAW 338 (347)
Q Consensus 297 l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~ 338 (347)
.....+.....++.+++.+||+.+|++|||+++|++.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 241 MRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred CCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 111222234468999999999999999999999999999874
No 95
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.8e-42 Score=311.43 Aligned_cols=250 Identities=24% Similarity=0.282 Sum_probs=200.6
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC-----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN-----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVY 139 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 139 (347)
++|...+.||+|+||.||++... +|+.+|+|.+.... ....+.+|+.+++.++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 35777889999999999999954 78999999987532 2345778999999999999999999999999999999
Q ss_pred eecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcc
Q 040826 140 EFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES 219 (347)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 219 (347)
||+++|+|.+++......+++..+..++.|++.||.||| +.+++||||||+||+++.++.++|+|||++........
T Consensus 81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~ 157 (330)
T cd05601 81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVH---QMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM 157 (330)
T ss_pred CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCc
Confidence 999999999999776567999999999999999999999 88999999999999999999999999999987643333
Q ss_pred ceeecccCCCCcccccccc------CCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCccccc
Q 040826 220 KVFTDVRGTIGYMDPEYMT------NAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFE 293 (347)
Q Consensus 220 ~~~~~~~~~~~y~aPE~~~------~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (347)
.......|+..|+|||.+. +..++.++||||||+++|+|++|+.||...... ..+.. +....... .+
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~-~~~~~----i~~~~~~~-~~- 230 (330)
T cd05601 158 VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSA-KTYNN----IMNFQRFL-KF- 230 (330)
T ss_pred eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHH-HHHHH----HHcCCCcc-CC-
Confidence 2333456899999999986 456788999999999999999999999754322 11111 11111100 00
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 294 DPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 294 ~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
+ .......++.+|+..||+ +|.+|||+.+++.
T Consensus 231 -~-----~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 231 -P-----EDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred -C-----CCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 0 001123568899999997 9999999999875
No 96
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=6e-42 Score=300.48 Aligned_cols=253 Identities=21% Similarity=0.320 Sum_probs=199.1
Q ss_pred HhcCcccCCeeeecCCeeEEEEEeC------CCCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCe
Q 040826 64 AINNDWDRRFLGRGSAGLVYKGVLP------SGQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGE 134 (347)
Q Consensus 64 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 134 (347)
..++|...+.||+|+||.||+|... ++..+|+|.+..... ...+.+|+.+++.++||||+++++++.....
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4567888999999999999998742 356799998865432 2357889999999999999999999998899
Q ss_pred EEEEEeecCCCChHHHhhcCC---------CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEE
Q 040826 135 QYLVYEFCAAGNLAQHLLRKD---------SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205 (347)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~~---------~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl 205 (347)
.++||||+++++|.+++.... ..+++..+..++.|++.||.||| +.+++|+||||+||++++++.++|
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCcchheEEEcCCCCEEE
Confidence 999999999999999986422 23577889999999999999999 789999999999999999999999
Q ss_pred eecccceecCCCccce-eecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhc
Q 040826 206 SDFGLAKMLGMEESKV-FTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVS 283 (347)
Q Consensus 206 ~dfg~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~ 283 (347)
+|||++.......... .....++..|+|||.+.+..++.++|+||||+++|+|++ |..||..... .........
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~-~~~~~~~~~--- 236 (277)
T cd05062 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN-EQVLRFVME--- 236 (277)
T ss_pred CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHHHc---
Confidence 9999987543222211 112345778999999998889999999999999999999 6777753321 121111111
Q ss_pred CCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 040826 284 MGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEID 335 (347)
Q Consensus 284 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~ 335 (347)
.... ..+......+.+++.+||+.||++|||+.|+++.|+
T Consensus 237 -~~~~-----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 237 -GGLL-----------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred -CCcC-----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 1100 011123357999999999999999999999999886
No 97
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.1e-41 Score=295.34 Aligned_cols=248 Identities=27% Similarity=0.385 Sum_probs=200.4
Q ss_pred cCcccCCeeeecCCeeEEEEEeCCCCEEEEEEcccCCChhHHHHHHHHhhcCCCCcceeeeeEEE-eCCeEEEEEeecCC
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCV-EGGEQYLVYEFCAA 144 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~~~ 144 (347)
.+|...+.||+|+||.||++.. .|..+++|.+......+.+.+|+..+++++|+|++++++++. .++..++++||+++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~ 84 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAK 84 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE-cCCcEEEEEeCCCchHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCC
Confidence 4567778899999999999987 478899999877666778999999999999999999999764 45678999999999
Q ss_pred CChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceee
Q 040826 145 GNLAQHLLRKD-SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT 223 (347)
Q Consensus 145 gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 223 (347)
++|.+++.+.. ..+++..+..++.|++.||+||| ++|++|+||||+||++++++.++|+|||.+....... .
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~----~ 157 (256)
T cd05082 85 GSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----D 157 (256)
T ss_pred CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeccccchheEEEcCCCcEEecCCccceeccccC----C
Confidence 99999987543 45889999999999999999999 8899999999999999999999999999987643211 2
Q ss_pred cccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCC
Q 040826 224 DVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNIN 302 (347)
Q Consensus 224 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 302 (347)
....+..|+|||.+.+..++.++||||||+++|+|++ |+.|+..... ......+..+..+ ...
T Consensus 158 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~-----~~~~~~~~~~~~~-----------~~~ 221 (256)
T cd05082 158 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-----KDVVPRVEKGYKM-----------DAP 221 (256)
T ss_pred CCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHhcCCCC-----------CCC
Confidence 2334668999999998889999999999999999998 8888763211 1111111111110 111
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 040826 303 RADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKA 337 (347)
Q Consensus 303 ~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~ 337 (347)
...+..+.+++.+||+.+|++|||+.++++.|+++
T Consensus 222 ~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 222 DGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 12346799999999999999999999999998753
No 98
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.1e-41 Score=305.13 Aligned_cols=239 Identities=28% Similarity=0.382 Sum_probs=193.5
Q ss_pred CeeeecCCeeEEEEEe----CCCCEEEEEEcccC------CChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 72 RFLGRGSAGLVYKGVL----PSGQVVAIKHIYKS------NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
+.||+|+||.||++.. .+++.||+|.+... .....+.+|+.+++.++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999984 35789999998643 1234567899999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccce
Q 040826 142 CAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKV 221 (347)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 221 (347)
+++++|.+++... ..+++..+..++.|++.||.||| +.+++||||||+||+++.++.++|+|||++...... ...
T Consensus 82 ~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~ 156 (323)
T cd05584 82 LSGGELFMHLERE-GIFMEDTACFYLSEISLALEHLH---QQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE-GTV 156 (323)
T ss_pred CCCchHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccC-CCc
Confidence 9999999988654 45788899999999999999999 889999999999999999999999999998754221 122
Q ss_pred eecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCC
Q 040826 222 FTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNI 301 (347)
Q Consensus 222 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 301 (347)
.....|+..|+|||.+.+..++.++||||||+++|+|++|+.||...... . ....+..+.....
T Consensus 157 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~-~----~~~~~~~~~~~~~----------- 220 (323)
T cd05584 157 THTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK-K----TIDKILKGKLNLP----------- 220 (323)
T ss_pred ccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH-H----HHHHHHcCCCCCC-----------
Confidence 23356899999999999888999999999999999999999999753321 1 1122222221111
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q 040826 302 NRADFESILKIAVLCVAKSSKGRP-----TIDVVYE 332 (347)
Q Consensus 302 ~~~~~~~l~~l~~~cl~~~p~~Rp-----s~~ei~~ 332 (347)
.....++.+++.+||+.+|++|| ++.++++
T Consensus 221 -~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 221 -PYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred -CCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 11235689999999999999999 7888766
No 99
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.9e-41 Score=300.27 Aligned_cols=255 Identities=25% Similarity=0.395 Sum_probs=200.2
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCC--EEEEEEcccCCC---hhHHHHHHHHhhcC-CCCcceeeeeEEEeCCeEEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQ--VVAIKHIYKSNN---TDSFSREVEGLSRV-RHPNLVCLFGCCVEGGEQYLV 138 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~--~vavK~~~~~~~---~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv 138 (347)
++|...+.||+|+||.||+|... ++. .+++|.+..... ...+.+|+.++.++ +||||+++++++...+..+++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 46778889999999999999864 343 468887764322 34688899999999 799999999999998999999
Q ss_pred EeecCCCChHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCce
Q 040826 139 YEFCAAGNLAQHLLRKD---------------SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP 203 (347)
Q Consensus 139 ~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~ 203 (347)
+||+++++|.+++.... ..+++..++.++.|++.|+.||| +.+++|+||||+||++++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLS---EKQFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCcCCcceEEECCCCeE
Confidence 99999999999985422 34888999999999999999999 8899999999999999999999
Q ss_pred EEeecccceecCCCccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhh
Q 040826 204 KLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDV 282 (347)
Q Consensus 204 kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~ 282 (347)
+|+|||++..... .........+..|+|||.+.+..++.++||||||+++|+|++ |..||...... +... ..
T Consensus 159 kl~dfg~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~-~~~~----~~ 231 (297)
T cd05089 159 KIADFGLSRGEEV--YVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA-ELYE----KL 231 (297)
T ss_pred EECCcCCCccccc--eeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-HHHH----HH
Confidence 9999999864221 111111223567999999998889999999999999999997 98988643221 1111 11
Q ss_pred cCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 040826 283 SMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWKNT 341 (347)
Q Consensus 283 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~~~ 341 (347)
..+... ..+......+.+++.+||+.+|.+|||+.++++.|+++++..
T Consensus 232 ~~~~~~-----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 232 PQGYRM-----------EKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred hcCCCC-----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 111100 111123357899999999999999999999999999987643
No 100
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=7.2e-42 Score=311.56 Aligned_cols=251 Identities=20% Similarity=0.228 Sum_probs=199.9
Q ss_pred hcCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccC-----CChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEE
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKS-----NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLV 138 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 138 (347)
.++|...+.||+|+||.||++... +++.+|+|.+... .....+.+|+.+++.++||||+++++++.+++..++|
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv 121 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMV 121 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence 567888899999999999999954 6889999998642 2234577899999999999999999999999999999
Q ss_pred EeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCc
Q 040826 139 YEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE 218 (347)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 218 (347)
|||+++|+|.+++... .+++..+..++.|++.||.||| +.+++||||||+|||++.++.+||+|||++.......
T Consensus 122 ~Ey~~gg~L~~~l~~~--~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~ 196 (370)
T cd05596 122 MEYMPGGDLVNLMSNY--DIPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANG 196 (370)
T ss_pred EcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCC
Confidence 9999999999988543 4788899999999999999999 8899999999999999999999999999998754322
Q ss_pred cceeecccCCCCccccccccCC----ccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccC
Q 040826 219 SKVFTDVRGTIGYMDPEYMTNA----KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFED 294 (347)
Q Consensus 219 ~~~~~~~~~~~~y~aPE~~~~~----~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (347)
........||+.|+|||.+.+. .++.++|+|||||++|+|++|+.||...... ..+ ..+........ .
T Consensus 197 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~-~~~----~~i~~~~~~~~---~ 268 (370)
T cd05596 197 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-GTY----SKIMDHKNSLT---F 268 (370)
T ss_pred cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH-HHH----HHHHcCCCcCC---C
Confidence 2223345689999999988653 4788999999999999999999999754321 111 22211111100 0
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhccCCCCC--CCCHHHHHHH
Q 040826 295 PRLNGNINRADFESILKIAVLCVAKSSKG--RPTIDVVYEE 333 (347)
Q Consensus 295 ~~l~~~~~~~~~~~l~~l~~~cl~~~p~~--Rps~~ei~~~ 333 (347)
+. ......++.+++.+||+.+|.+ |||+.++++.
T Consensus 269 ~~-----~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 269 PD-----DIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred CC-----cCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 00 0112357899999999999987 9999999764
No 101
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.1e-41 Score=299.27 Aligned_cols=243 Identities=20% Similarity=0.241 Sum_probs=193.6
Q ss_pred eeecCCeeEEEEEeC-CCCEEEEEEcccCC-----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCCCCh
Q 040826 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSN-----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNL 147 (347)
Q Consensus 74 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 147 (347)
||+|+||.||++... +|+.+|+|.+.... ....+..|+.+++.++|+||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999954 78899999986532 123567899999999999999999999999999999999999999
Q ss_pred HHHhhc---CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeec
Q 040826 148 AQHLLR---KDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD 224 (347)
Q Consensus 148 ~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 224 (347)
.+++.. ....+++..+..++.|++.||.||| +.+++||||||+||++++++.++|+|||++....... .....
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~-~~~~~ 156 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLH---QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ-SKTKG 156 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCC-ccccc
Confidence 887743 3456899999999999999999999 8899999999999999999999999999987654222 22234
Q ss_pred ccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHH
Q 040826 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRA 304 (347)
Q Consensus 225 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 304 (347)
..|+..|+|||.+.+..++.++|+||||+++|+|++|+.||........ ............. .++..
T Consensus 157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~------------~~~~~ 223 (280)
T cd05608 157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE-NKELKQRILNDSV------------TYPDK 223 (280)
T ss_pred cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchh-HHHHHHhhcccCC------------CCccc
Confidence 5689999999999999999999999999999999999999975322111 1111111111110 11223
Q ss_pred HHHHHHHHHHHhccCCCCCCC-----CHHHHHHH
Q 040826 305 DFESILKIAVLCVAKSSKGRP-----TIDVVYEE 333 (347)
Q Consensus 305 ~~~~l~~l~~~cl~~~p~~Rp-----s~~ei~~~ 333 (347)
....+.+++.+||+.||++|| |+++++++
T Consensus 224 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 224 FSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred CCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 446789999999999999999 66777753
No 102
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=2.4e-41 Score=295.15 Aligned_cols=253 Identities=27% Similarity=0.418 Sum_probs=202.9
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCC---EEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQ---VVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLV 138 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~---~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 138 (347)
++|...+.||+|+||.||+|... ++. .+++|.+..... .+.+.+|++++++++|||++++.+++...+..+++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII 84 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence 45677789999999999999964 333 799998865432 34688899999999999999999999999999999
Q ss_pred EeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCc
Q 040826 139 YEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE 218 (347)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 218 (347)
|||+++++|.+++......+++..+..++.|++.|+.||| +.+++|+||||+||++++++.++++|||++.......
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 161 (268)
T cd05063 85 TEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLS---DMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDP 161 (268)
T ss_pred EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEEcCCCcEEECCCccceeccccc
Confidence 9999999999999776677999999999999999999999 7899999999999999999999999999988654322
Q ss_pred cceee--cccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCC
Q 040826 219 SKVFT--DVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDP 295 (347)
Q Consensus 219 ~~~~~--~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (347)
..... ....+..|+|||.+.+..++.++|+||||+++|+|++ |..||..... .+ ....+..+...
T Consensus 162 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~-~~----~~~~i~~~~~~------- 229 (268)
T cd05063 162 EGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN-HE----VMKAINDGFRL------- 229 (268)
T ss_pred ccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH-HH----HHHHHhcCCCC-------
Confidence 21111 1223457999999988889999999999999999997 9999864322 11 11222111110
Q ss_pred CCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 040826 296 RLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKA 337 (347)
Q Consensus 296 ~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~ 337 (347)
+...+...++.+++.+||+.+|++||++.+|++.|+++
T Consensus 230 ----~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 230 ----PAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred ----CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 01112336789999999999999999999999999876
No 103
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-43 Score=296.35 Aligned_cols=262 Identities=25% Similarity=0.314 Sum_probs=199.8
Q ss_pred hcCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccC----CChhHHHHHHHHhhcCCCCcceeeeeEEEe-----CCe
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKS----NNTDSFSREVEGLSRVRHPNLVCLFGCCVE-----GGE 134 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-----~~~ 134 (347)
...|...+.||+|+||.|+.+.. .+|+.||+|++... .......+|+.+|++++|+||+.+.+.+.. -+.
T Consensus 21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D 100 (359)
T KOG0660|consen 21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND 100 (359)
T ss_pred cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence 34555568899999999999994 57999999999743 234568899999999999999999998765 457
Q ss_pred EEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceec
Q 040826 135 QYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKML 214 (347)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~ 214 (347)
.|+|+|+|+. +|...++. ++.++.....-++.|++.||.|+| +.+++||||||+|++++.+..+||+|||+|+..
T Consensus 101 vYiV~elMet-DL~~iik~-~~~L~d~H~q~f~YQiLrgLKyiH---SAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~ 175 (359)
T KOG0660|consen 101 VYLVFELMET-DLHQIIKS-QQDLTDDHAQYFLYQILRGLKYIH---SANVIHRDLKPSNLLLNADCDLKICDFGLARYL 175 (359)
T ss_pred eEEehhHHhh-HHHHHHHc-CccccHHHHHHHHHHHHHhcchhh---cccccccccchhheeeccCCCEEeccccceeec
Confidence 8999999966 88887754 344999999999999999999999 899999999999999999999999999999987
Q ss_pred CCC-ccceeecccCCCCcccccccc-CCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCccc-
Q 040826 215 GME-ESKVFTDVRGTIGYMDPEYMT-NAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKD- 291 (347)
Q Consensus 215 ~~~-~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~- 291 (347)
... ....++..+.|.+|.|||++. ...|+.+.||||+|||+.||++|++.|.+. +...++..+..-...+......
T Consensus 176 ~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~-d~v~Ql~lI~~~lGtP~~e~l~~ 254 (359)
T KOG0660|consen 176 DKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGK-DYVHQLQLILELLGTPSEEDLQK 254 (359)
T ss_pred cccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCC-chHHHHHHHHHhcCCCCHHHHHH
Confidence 532 122346678899999999875 468999999999999999999999999743 2222222222221111000000
Q ss_pred --------ccC-------CCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 292 --------FED-------PRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 292 --------~~~-------~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
.+. ..+. ..-+.......+|+.+||..||.+|+|++|.+++
T Consensus 255 i~s~~ar~yi~slp~~p~~~f~-~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 255 IRSEKARPYIKSLPQIPKQPFS-SIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred hccHHHHHHHHhCCCCCCCCHH-HHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 000 0000 0001223578899999999999999999998863
No 104
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=2.3e-42 Score=313.25 Aligned_cols=250 Identities=25% Similarity=0.314 Sum_probs=202.0
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccC-----CChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKS-----NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVY 139 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 139 (347)
++|...+.||+|+||.||+|... +|+.||+|.+... .....+.+|+.++..++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 36778889999999999999965 7899999998653 23346888999999999999999999999999999999
Q ss_pred eecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCc-
Q 040826 140 EFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE- 218 (347)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~- 218 (347)
||+++++|.+++... ..+++..+..++.|++.||.||| +.|++||||||+||+++.++.++|+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~ 156 (350)
T cd05573 81 EYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVH---KLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKD 156 (350)
T ss_pred cCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCc
Confidence 999999999998665 56899999999999999999999 8899999999999999999999999999988654322
Q ss_pred ---------------------------cceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhh
Q 040826 219 ---------------------------SKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDA 271 (347)
Q Consensus 219 ---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~ 271 (347)
........||..|+|||.+.+..++.++|||||||++|+|++|+.||......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~ 236 (350)
T cd05573 157 REYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQ 236 (350)
T ss_pred ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHH
Confidence 11223356899999999999999999999999999999999999999754422
Q ss_pred hhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCC-HHHHHHH
Q 040826 272 RDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPT-IDVVYEE 333 (347)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps-~~ei~~~ 333 (347)
. ... .+...... ...|.. ....+++.+++.+|++ +|.+||+ +.++++.
T Consensus 237 ~-~~~----~i~~~~~~---~~~p~~-----~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 237 E-TYN----KIINWKES---LRFPPD-----PPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred H-HHH----HHhccCCc---ccCCCC-----CCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 1 111 11110000 000110 0133578999999997 9999999 9999874
No 105
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1e-41 Score=301.46 Aligned_cols=255 Identities=25% Similarity=0.362 Sum_probs=202.6
Q ss_pred hcCcccCCeeeecCCeeEEEEEeC------CCCEEEEEEcccCCCh---hHHHHHHHHhhcC-CCCcceeeeeEEEeCCe
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVLP------SGQVVAIKHIYKSNNT---DSFSREVEGLSRV-RHPNLVCLFGCCVEGGE 134 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~---~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 134 (347)
.++|...+.||+|+||.||++... +...+++|.+...... ..+.+|+++++++ +|+||+++++++..++.
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 90 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGP 90 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCC
Confidence 456777789999999999999853 2367999988764332 3577899999999 79999999999999999
Q ss_pred EEEEEeecCCCChHHHhhc---------------CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecC
Q 040826 135 QYLVYEFCAAGNLAQHLLR---------------KDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTE 199 (347)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~---------------~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~ 199 (347)
.+++|||+++|+|.+++.. ....+++..++.++.|++.|+.||| +.+++|+||||+||++++
T Consensus 91 ~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~Nil~~~ 167 (293)
T cd05053 91 LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA---SKKCIHRDLAARNVLVTE 167 (293)
T ss_pred eEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCccccccceeeEEEcC
Confidence 9999999999999999853 2356889999999999999999999 889999999999999999
Q ss_pred CCceEEeecccceecCCCccc-eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHH
Q 040826 200 KLEPKLSDFGLAKMLGMEESK-VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTR 277 (347)
Q Consensus 200 ~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~ 277 (347)
++.++|+|||.+......... ......++..|+|||.+.+..++.++||||||+++|+|++ |..|+...... +
T Consensus 168 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-~---- 242 (293)
T cd05053 168 DHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE-E---- 242 (293)
T ss_pred CCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHH-H----
Confidence 999999999999875432211 1222335678999999998899999999999999999998 88887633211 1
Q ss_pred HHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 040826 278 KARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAW 338 (347)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~ 338 (347)
.......+... ..+......+.+|+.+||+.||++|||+.++++.|++++
T Consensus 243 ~~~~~~~~~~~-----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 243 LFKLLKEGYRM-----------EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HHHHHHcCCcC-----------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 11111111110 111123357999999999999999999999999999875
No 106
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=2.2e-41 Score=295.17 Aligned_cols=256 Identities=24% Similarity=0.367 Sum_probs=205.7
Q ss_pred cCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC-----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN-----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVY 139 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 139 (347)
++|...+.||+|++|.||++.. .+|..+++|.+.... ....+.+|+.+++.++|+|++++++++..++..++++
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 3566778899999999999994 578999999876432 2246788999999999999999999999999999999
Q ss_pred eecCCCChHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCC
Q 040826 140 EFCAAGNLAQHLLR---KDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM 216 (347)
Q Consensus 140 e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 216 (347)
||+++++|.+++.. ....+++..++.++.|++.|+.||| +.+++|+||+|+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 99999999998853 2456899999999999999999999 88999999999999999999999999999876542
Q ss_pred CccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCC
Q 040826 217 EESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPR 296 (347)
Q Consensus 217 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (347)
.. .......++..|+|||.+.+..++.++|+||||+++|+|++|..||.......... .+....... +.
T Consensus 159 ~~-~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~---~~~~~~~~~-------~~ 227 (267)
T cd08229 159 KT-TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL---CKKIEQCDY-------PP 227 (267)
T ss_pred CC-cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHH---hhhhhcCCC-------CC
Confidence 22 11233458889999999988889999999999999999999999986432221111 111111110 10
Q ss_pred CCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 040826 297 LNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAW 338 (347)
Q Consensus 297 l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~ 338 (347)
. ......+.+.+++.+||+.+|++|||+.+|++.++++.
T Consensus 228 ~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 228 L---PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred C---CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 0 11124467999999999999999999999999998874
No 107
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.2e-41 Score=304.43 Aligned_cols=234 Identities=26% Similarity=0.361 Sum_probs=189.2
Q ss_pred CeeeecCCeeEEEEEeC-CCCEEEEEEcccC-----CChhHHHHHHHHhhcC-CCCcceeeeeEEEeCCeEEEEEeecCC
Q 040826 72 RFLGRGSAGLVYKGVLP-SGQVVAIKHIYKS-----NNTDSFSREVEGLSRV-RHPNLVCLFGCCVEGGEQYLVYEFCAA 144 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-----~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 144 (347)
+.||+|+||.||+|... +++.||+|.+... .....+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999964 6889999998653 2234567788888776 699999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeec
Q 040826 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD 224 (347)
Q Consensus 145 gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 224 (347)
|+|.+++... ..+++..+..++.|++.||.||| +.+++||||||+||+++.++.++|+|||++...... ......
T Consensus 81 g~L~~~i~~~-~~l~~~~~~~~~~ql~~~L~~lH---~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~-~~~~~~ 155 (320)
T cd05590 81 GDLMFHIQKS-RRFDEARARFYAAEITSALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN-GKTTST 155 (320)
T ss_pred chHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC-CCcccc
Confidence 9999888654 45899999999999999999999 889999999999999999999999999998754221 122334
Q ss_pred ccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHH
Q 040826 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRA 304 (347)
Q Consensus 225 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 304 (347)
..|+..|+|||.+.+..++.++|+||||+++|+|++|+.||...... . ....+..+..... ..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~-~----~~~~i~~~~~~~~------------~~ 218 (320)
T cd05590 156 FCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED-D----LFEAILNDEVVYP------------TW 218 (320)
T ss_pred cccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH-H----HHHHHhcCCCCCC------------CC
Confidence 56899999999999989999999999999999999999999744321 1 1122222211111 11
Q ss_pred HHHHHHHHHHHhccCCCCCCCCH
Q 040826 305 DFESILKIAVLCVAKSSKGRPTI 327 (347)
Q Consensus 305 ~~~~l~~l~~~cl~~~p~~Rps~ 327 (347)
...++.+++.+||+.||.+||++
T Consensus 219 ~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 219 LSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred CCHHHHHHHHHHcccCHHHCCCC
Confidence 23578999999999999999998
No 108
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=9.3e-42 Score=320.70 Aligned_cols=255 Identities=22% Similarity=0.286 Sum_probs=202.2
Q ss_pred HHHHHhcCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCCC----hhHHHHHHHHhhcCCCCcceeeeeEEEeCC-
Q 040826 60 EIENAINNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNN----TDSFSREVEGLSRVRHPNLVCLFGCCVEGG- 133 (347)
Q Consensus 60 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~h~niv~~~~~~~~~~- 133 (347)
+.....++|...+.||+|+||.||++.. .+|+.||+|.+..... ...+.+|+..+..++|+|++++.+.+....
T Consensus 26 ~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~ 105 (496)
T PTZ00283 26 TAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDP 105 (496)
T ss_pred cccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccc
Confidence 3344456888999999999999999984 5789999999865422 235778999999999999999887765322
Q ss_pred -------eEEEEEeecCCCChHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCce
Q 040826 134 -------EQYLVYEFCAAGNLAQHLLR---KDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP 203 (347)
Q Consensus 134 -------~~~lv~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~ 203 (347)
..++||||+++|+|.+++.. ....+++..+..++.|++.||.||| +.+++||||||+|||++.++.+
T Consensus 106 ~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH---~~~IiHrDLKP~NILl~~~~~v 182 (496)
T PTZ00283 106 RNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVH---SKHMIHRDIKSANILLCSNGLV 182 (496)
T ss_pred cCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEeCCCCE
Confidence 36899999999999998854 2356899999999999999999999 8899999999999999999999
Q ss_pred EEeecccceecCCCcc-ceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhh
Q 040826 204 KLSDFGLAKMLGMEES-KVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDV 282 (347)
Q Consensus 204 kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~ 282 (347)
||+|||+++....... .......||..|+|||.+.+..++.++||||||+++|+|++|+.||...... ......
T Consensus 183 kL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~-----~~~~~~ 257 (496)
T PTZ00283 183 KLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENME-----EVMHKT 257 (496)
T ss_pred EEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH-----HHHHHH
Confidence 9999999987543211 1223456899999999999999999999999999999999999999743221 122222
Q ss_pred cCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 283 SMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 283 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
..+... ..+.....++.+++.+||+.||.+|||+.++++.
T Consensus 258 ~~~~~~-----------~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 258 LAGRYD-----------PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred hcCCCC-----------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 222111 1112233579999999999999999999999864
No 109
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=2.8e-41 Score=298.24 Aligned_cols=254 Identities=24% Similarity=0.357 Sum_probs=200.7
Q ss_pred cccCCeeeecCCeeEEEEEeC------CCCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEE
Q 040826 68 DWDRRFLGRGSAGLVYKGVLP------SGQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLV 138 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 138 (347)
|...+.||+|+||.||+|... +...+++|.+..... ...+.+|+..++.++||||+++++.+..++..+++
T Consensus 2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (290)
T cd05045 2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLI 81 (290)
T ss_pred ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEE
Confidence 556788999999999999842 235788888865443 24688899999999999999999999999999999
Q ss_pred EeecCCCChHHHhhcC-----------------------CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCE
Q 040826 139 YEFCAAGNLAQHLLRK-----------------------DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNI 195 (347)
Q Consensus 139 ~e~~~~gsL~~~l~~~-----------------------~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Ni 195 (347)
+||+.+++|.+++... ...+++..++.++.|++.||.||| +.+++|+||+|+||
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~ivH~dikp~ni 158 (290)
T cd05045 82 VEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA---EMKLVHRDLAARNV 158 (290)
T ss_pred EEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHH---HCCeehhhhhhheE
Confidence 9999999999987531 134788999999999999999999 88999999999999
Q ss_pred EecCCCceEEeecccceecCCCccc-eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhh
Q 040826 196 LLTEKLEPKLSDFGLAKMLGMEESK-VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARD 273 (347)
Q Consensus 196 li~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~ 273 (347)
++++++.++|+|||++......... ......++..|+|||.+.+..++.++||||||+++++|++ |..||...... .
T Consensus 159 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-~ 237 (290)
T cd05045 159 LVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE-R 237 (290)
T ss_pred EEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH-H
Confidence 9999999999999998765322211 1222345678999999988889999999999999999998 88888643211 1
Q ss_pred HHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 040826 274 QLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWKN 340 (347)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~~ 340 (347)
+..... .+... ........++.+++.+||+.+|.+||++.++++.|++++..
T Consensus 238 -~~~~~~---~~~~~-----------~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~~ 289 (290)
T cd05045 238 -LFNLLK---TGYRM-----------ERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMVK 289 (290)
T ss_pred -HHHHHh---CCCCC-----------CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHhc
Confidence 111111 11000 11112335799999999999999999999999999999754
No 110
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=2.8e-41 Score=296.56 Aligned_cols=255 Identities=24% Similarity=0.378 Sum_probs=201.8
Q ss_pred cCcccCCeeeecCCeeEEEEEe-CCCC----EEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVL-PSGQ----VVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYL 137 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~-~~~~----~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 137 (347)
++|...+.||+|+||.||+|.+ .+|. .||+|.+..... ...+.+|...++.++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l 85 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQL 85 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEE
Confidence 4566778999999999999984 3454 489998865433 3467789999999999999999998875 45789
Q ss_pred EEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCC
Q 040826 138 VYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217 (347)
Q Consensus 138 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 217 (347)
++||+++|+|.+++......+++..++.++.|++.||.||| +++++|+||||+||++++++.++|+|||++......
T Consensus 86 ~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~ 162 (279)
T cd05109 86 VTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLE---EVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDID 162 (279)
T ss_pred EEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEcCCCcEEECCCCceeecccc
Confidence 99999999999999776667999999999999999999999 889999999999999999999999999999876432
Q ss_pred ccce-eecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCC
Q 040826 218 ESKV-FTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDP 295 (347)
Q Consensus 218 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (347)
.... .....++..|+|||...+..++.++||||||+++|||++ |..||..... ......... +...
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~~~~---~~~~------- 230 (279)
T cd05109 163 ETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA--REIPDLLEK---GERL------- 230 (279)
T ss_pred cceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHC---CCcC-------
Confidence 2211 122335678999999998889999999999999999998 8888763321 112222211 1111
Q ss_pred CCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 040826 296 RLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWKN 340 (347)
Q Consensus 296 ~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~~ 340 (347)
........++.+++.+||+.||++|||+.++++.|+.+.++
T Consensus 231 ----~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05109 231 ----PQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARD 271 (279)
T ss_pred ----CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence 00112335789999999999999999999999999988554
No 111
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-42 Score=310.90 Aligned_cols=241 Identities=26% Similarity=0.344 Sum_probs=201.2
Q ss_pred HhcCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccC-----CChhHHHHHHHHhhcCC-CCcceeeeeEEEeCCeEE
Q 040826 64 AINNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKS-----NNTDSFSREVEGLSRVR-HPNLVCLFGCCVEGGEQY 136 (347)
Q Consensus 64 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-----~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~ 136 (347)
..++|....+||+|+||.|+++..+ +++.+|||.+.+. .+.+....|..++...+ ||.++.++.++.+.+++|
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 4577888999999999999999955 6889999999875 45567888888887775 999999999999999999
Q ss_pred EEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCC
Q 040826 137 LVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM 216 (347)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 216 (347)
+||||+.||++. ..+..+.+++..+.-+++.++.||+||| ++||++||||.+|||+|.+|.+||+|||+++...
T Consensus 446 fvmey~~Ggdm~--~~~~~~~F~e~rarfyaAev~l~L~fLH---~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m- 519 (694)
T KOG0694|consen 446 FVMEYVAGGDLM--HHIHTDVFSEPRARFYAAEVVLGLQFLH---ENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM- 519 (694)
T ss_pred EEEEecCCCcEE--EEEecccccHHHHHHHHHHHHHHHHHHH---hcCceeeecchhheEEcccCcEEecccccccccC-
Confidence 999999999832 2234567999999999999999999999 8999999999999999999999999999999753
Q ss_pred CccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCC
Q 040826 217 EESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPR 296 (347)
Q Consensus 217 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (347)
.....+++.+||+.|+|||++.+..|+.++|+|||||+|||||.|..||.++..+ + ....+...+..
T Consensus 520 ~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEe-e----~FdsI~~d~~~-------- 586 (694)
T KOG0694|consen 520 GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEE-E----VFDSIVNDEVR-------- 586 (694)
T ss_pred CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHH-H----HHHHHhcCCCC--------
Confidence 2334567789999999999999999999999999999999999999999854322 2 22222222211
Q ss_pred CCCCCCHHHHHHHHHHHHHhccCCCCCCCCH
Q 040826 297 LNGNINRADFESILKIAVLCVAKSSKGRPTI 327 (347)
Q Consensus 297 l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~ 327 (347)
++.-.+.+...++.+.|.+||++|.-+
T Consensus 587 ----yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 587 ----YPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred ----CCCcccHHHHHHHHHHhccCcccccCC
Confidence 222334678899999999999999876
No 112
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.6e-41 Score=292.87 Aligned_cols=247 Identities=22% Similarity=0.343 Sum_probs=201.4
Q ss_pred CcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccC----CChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKS----NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
+|...+.||+|++|.||++... +|+.+++|.+... .....+.+|+.++++++|||++++++++...+..++++||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 3566788999999999999964 6889999988643 2345688899999999999999999999999999999999
Q ss_pred cCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccc
Q 040826 142 CAAGNLAQHLLRK-DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220 (347)
Q Consensus 142 ~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 220 (347)
+++++|.+++... ...+++..++.++.|++.||.||| +.+++|+||+|+||++++++.++|+|||++....... .
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH---~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~-~ 156 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLH---SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT-N 156 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEeCCCCEEEcccccceeccCcc-c
Confidence 9999999998764 467899999999999999999999 8899999999999999999999999999988654322 2
Q ss_pred eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCC
Q 040826 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGN 300 (347)
Q Consensus 221 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 300 (347)
......++..|+|||+..+..++.++|+||||+++++|++|+.||...... . .......+..+ .
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~----~~~~~~~~~~~-----------~ 220 (256)
T cd08529 157 FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG-A----LILKIIRGVFP-----------P 220 (256)
T ss_pred hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH-H----HHHHHHcCCCC-----------C
Confidence 223345788999999999988999999999999999999999999754321 1 11111111111 1
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 301 INRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 301 ~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
+.......+.+++.+||+.+|++||++.++++.
T Consensus 221 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 221 VSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred CccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 111233579999999999999999999999863
No 113
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.2e-41 Score=300.91 Aligned_cols=260 Identities=24% Similarity=0.353 Sum_probs=204.2
Q ss_pred hcCcccCCeeeecCCeeEEEEEe--------CCCCEEEEEEcccCCC---hhHHHHHHHHhhcC-CCCcceeeeeEEEeC
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVL--------PSGQVVAIKHIYKSNN---TDSFSREVEGLSRV-RHPNLVCLFGCCVEG 132 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~--------~~~~~vavK~~~~~~~---~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 132 (347)
.++|...+.||+|+||.||++.. .++..+++|.+..... ...+.+|+..++.+ +||||+++++++...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 45667778999999999999973 1245799998865432 34688999999999 799999999999999
Q ss_pred CeEEEEEeecCCCChHHHhhcC---------------CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEe
Q 040826 133 GEQYLVYEFCAAGNLAQHLLRK---------------DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILL 197 (347)
Q Consensus 133 ~~~~lv~e~~~~gsL~~~l~~~---------------~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili 197 (347)
...+++|||+++|+|.+++.+. ...+++..+..++.|++.||.||| ++|++|+||||+||++
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Nili 170 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA---SQKCIHRDLAARNVLV 170 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHH---HCCeeecccccceEEE
Confidence 9999999999999999998643 134788889999999999999999 8899999999999999
Q ss_pred cCCCceEEeecccceecCCCccc-eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHH
Q 040826 198 TEKLEPKLSDFGLAKMLGMEESK-VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQL 275 (347)
Q Consensus 198 ~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~ 275 (347)
++++.++|+|||.+......... ......++..|+|||.+.+..++.++||||||+++|+|++ |..|+.... ..+
T Consensus 171 ~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-~~~-- 247 (304)
T cd05101 171 TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VEE-- 247 (304)
T ss_pred cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC-HHH--
Confidence 99999999999999876432221 1222345678999999988889999999999999999998 667665321 111
Q ss_pred HHHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhhh
Q 040826 276 TRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWKNTMV 343 (347)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~~~~~ 343 (347)
.......+... .....+...+.+++.+||+.+|.+|||+.++++.|++++.-..+
T Consensus 248 --~~~~~~~~~~~-----------~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~~~~ 302 (304)
T cd05101 248 --LFKLLKEGHRM-----------DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTLTTN 302 (304)
T ss_pred --HHHHHHcCCcC-----------CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHhhhc
Confidence 12222111111 01113346799999999999999999999999999999765433
No 114
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=7.5e-41 Score=291.76 Aligned_cols=256 Identities=24% Similarity=0.352 Sum_probs=207.1
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccC-----CChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKS-----NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVY 139 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 139 (347)
++|...+.||+|++|.||+|... +|+.+++|.+... .....+.+|++++++++|+|++++++.+...+..+++|
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 56788899999999999999965 7899999987532 12456889999999999999999999999999999999
Q ss_pred eecCCCChHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCC
Q 040826 140 EFCAAGNLAQHLLR---KDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM 216 (347)
Q Consensus 140 e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 216 (347)
||+++++|.+++.. ....+++..+..++.|++.|+.||| +.|++|+||+|+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMH---SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 99999999998853 2456899999999999999999999 88999999999999999999999999999876542
Q ss_pred CccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCC
Q 040826 217 EESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPR 296 (347)
Q Consensus 217 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (347)
.. .......++..|+|||.+.+..++.++|+||||+++|+|++|+.||......... .......+..+ +
T Consensus 159 ~~-~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---~~~~~~~~~~~------~- 227 (267)
T cd08224 159 KT-TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYS---LCKKIEKCDYP------P- 227 (267)
T ss_pred CC-cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHH---HHhhhhcCCCC------C-
Confidence 22 1122345788999999999888999999999999999999999998644322111 11111111110 0
Q ss_pred CCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 040826 297 LNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAW 338 (347)
Q Consensus 297 l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~ 338 (347)
.........+.+++.+||..+|++|||+.+|++.|+++.
T Consensus 228 ---~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 228 ---LPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred ---CChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 001133457999999999999999999999999999873
No 115
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=2.9e-41 Score=294.57 Aligned_cols=253 Identities=28% Similarity=0.397 Sum_probs=202.4
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-C---CCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-S---GQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLV 138 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~---~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 138 (347)
.+|...+.||+|+||.||+|... + +..+++|.+..... ...+.+|+.++++++||||+++++++..++..+++
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 45677789999999999999853 2 33799998865432 34688899999999999999999999999999999
Q ss_pred EeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCc
Q 040826 139 YEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE 218 (347)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 218 (347)
|||+++++|.+++......+++..+..++.|++.|+.||| +.+++|+||||+||+++.++.++++|||++.......
T Consensus 84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd05066 84 TEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 160 (267)
T ss_pred EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeehhhchhcEEECCCCeEEeCCCCccccccccc
Confidence 9999999999999776667899999999999999999999 8899999999999999999999999999998764322
Q ss_pred cceee--cccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCC
Q 040826 219 SKVFT--DVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDP 295 (347)
Q Consensus 219 ~~~~~--~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (347)
..... ...++..|+|||.+.+..++.++|+||||+++|++++ |..||..... .+...... .+...
T Consensus 161 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~-~~~~~~~~----~~~~~------- 228 (267)
T cd05066 161 EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSN-QDVIKAIE----EGYRL------- 228 (267)
T ss_pred ceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCH-HHHHHHHh----CCCcC-------
Confidence 21111 1223568999999998889999999999999999886 9988864321 11111111 11110
Q ss_pred CCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 040826 296 RLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKA 337 (347)
Q Consensus 296 ~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~ 337 (347)
......++.+.+++.+||+.+|.+|||+.++++.|+++
T Consensus 229 ----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 229 ----PAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred ----CCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 01112335789999999999999999999999999875
No 116
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.9e-41 Score=298.48 Aligned_cols=248 Identities=24% Similarity=0.277 Sum_probs=199.7
Q ss_pred cccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC-----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 68 DWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN-----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
|...+.||+|+||.||++.. .+++.||+|.+.... ....+.+|+.++++++||||+++++.+.+++..+++|||
T Consensus 2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEec
Confidence 56678899999999999995 478999999986532 123567899999999999999999999998999999999
Q ss_pred cCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccc
Q 040826 142 CAAGNLAQHLLRK-DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220 (347)
Q Consensus 142 ~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 220 (347)
+++|+|.+++... ...+++..+..++.|++.|+.||| +.+++|+||+|+||++++++.++|+|||++...... .
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~--~ 156 (285)
T cd05605 82 MNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLH---RERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG--E 156 (285)
T ss_pred cCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCC--C
Confidence 9999999888653 346899999999999999999999 789999999999999999999999999998875322 1
Q ss_pred eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCC
Q 040826 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGN 300 (347)
Q Consensus 221 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 300 (347)
......|+..|+|||.+.+..++.++|+||+|+++|+|++|+.||...... .........+..... .
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~------------~ 223 (285)
T cd05605 157 TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEK-VKREEVERRVKEDQE------------E 223 (285)
T ss_pred ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchh-hHHHHHHHHhhhccc------------c
Confidence 223346899999999999888999999999999999999999999753221 111222222211111 1
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHH
Q 040826 301 INRADFESILKIAVLCVAKSSKGRP-----TIDVVYEE 333 (347)
Q Consensus 301 ~~~~~~~~l~~l~~~cl~~~p~~Rp-----s~~ei~~~ 333 (347)
+.......+.+|+.+||+.||.+|| +++++++.
T Consensus 224 ~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 224 YSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred cCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 1223346789999999999999999 78888653
No 117
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.4e-41 Score=297.56 Aligned_cols=252 Identities=26% Similarity=0.408 Sum_probs=198.7
Q ss_pred cCcccCCeeeecCCeeEEEEEe-----CCCCEEEEEEcccCCCh---hHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVL-----PSGQVVAIKHIYKSNNT---DSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYL 137 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~---~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 137 (347)
++|...+.||+|+||.||+|.. .++..+++|.+...... ..+.+|+.++++++|||++++++++......++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 3556678899999999999984 24578999998754332 457889999999999999999999999999999
Q ss_pred EEeecCCCChHHHhhcC----------------CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCC
Q 040826 138 VYEFCAAGNLAQHLLRK----------------DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKL 201 (347)
Q Consensus 138 v~e~~~~gsL~~~l~~~----------------~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~ 201 (347)
+|||+++++|.+++... ...+++.....++.|++.||.||| +++++|+||||+||++++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLS---SHFFVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hcCeehhccccceEEEcCCC
Confidence 99999999999998422 134788899999999999999999 78999999999999999999
Q ss_pred ceEEeecccceecCCCcc-ceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHH
Q 040826 202 EPKLSDFGLAKMLGMEES-KVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKA 279 (347)
Q Consensus 202 ~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~ 279 (347)
.++|+|||++........ .......++..|+|||.+.+..++.++|+||||+++|+|++ |..||..... .. .....
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~-~~-~~~~~ 239 (283)
T cd05090 162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN-QE-VIEMV 239 (283)
T ss_pred cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH-HH-HHHHH
Confidence 999999999986532221 11223345678999999988889999999999999999998 8888754321 11 11111
Q ss_pred hhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 040826 280 RDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDK 336 (347)
Q Consensus 280 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~ 336 (347)
. ..... ..+......+.+++.+||+.||.+||++.+|.++|.+
T Consensus 240 ~---~~~~~-----------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 240 R---KRQLL-----------PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred H---cCCcC-----------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 1 11100 0111223579999999999999999999999998864
No 118
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=2.7e-41 Score=293.13 Aligned_cols=244 Identities=28% Similarity=0.437 Sum_probs=194.2
Q ss_pred eeeecCCeeEEEEEe---CCCCEEEEEEcccCCC----hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCCC
Q 040826 73 FLGRGSAGLVYKGVL---PSGQVVAIKHIYKSNN----TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145 (347)
Q Consensus 73 ~lg~G~~g~V~~~~~---~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 145 (347)
.||+|+||.||+|.+ .++..+|+|.+..... .+.+.+|+.+++.++||||+++++++. ....+++|||++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 589999999999974 3578899998865432 246788999999999999999999875 45678999999999
Q ss_pred ChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccce--ee
Q 040826 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKV--FT 223 (347)
Q Consensus 146 sL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~--~~ 223 (347)
+|.+++... ..+++..+..++.|++.|+.||| +++++|+||||.||++++++.++|+|||++.......... ..
T Consensus 81 ~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 156 (257)
T cd05116 81 PLNKFLQKN-KHVTEKNITELVHQVSMGMKYLE---ETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKT 156 (257)
T ss_pred cHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecC
Confidence 999988643 45899999999999999999999 8899999999999999999999999999998764332211 11
Q ss_pred cccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCC
Q 040826 224 DVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNIN 302 (347)
Q Consensus 224 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 302 (347)
...++..|+|||.+.+..++.++|+||||+++|+|++ |..||...... .... .+..+..+ ..+
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-~~~~----~i~~~~~~-----------~~~ 220 (257)
T cd05116 157 HGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN-EVTQ----MIESGERM-----------ECP 220 (257)
T ss_pred CCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-HHHH----HHHCCCCC-----------CCC
Confidence 2234578999999988889999999999999999998 88888643221 1111 11111111 111
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 040826 303 RADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKA 337 (347)
Q Consensus 303 ~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~ 337 (347)
....+++.+++.+||+.||.+|||+.+|.+.|++.
T Consensus 221 ~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 221 QRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred CCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 12346799999999999999999999999999865
No 119
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.9e-41 Score=298.46 Aligned_cols=256 Identities=25% Similarity=0.355 Sum_probs=200.8
Q ss_pred cccCCeeeecCCeeEEEEEe-----CCCCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeC--CeEEE
Q 040826 68 DWDRRFLGRGSAGLVYKGVL-----PSGQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEG--GEQYL 137 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~l 137 (347)
|...+.||+|+||.||.+.. .++..|++|.+..... ...+.+|+++++.++|||++++.+++... ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (284)
T cd05079 6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL 85 (284)
T ss_pred hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEE
Confidence 45678899999999999973 3578899999875432 34688999999999999999999998775 56899
Q ss_pred EEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCC
Q 040826 138 VYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217 (347)
Q Consensus 138 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 217 (347)
+|||+++++|.+++......+++..+..++.|++.||.||| ++|++|+||||+||+++.++.++|+|||++......
T Consensus 86 v~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~ 162 (284)
T cd05079 86 IMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD 162 (284)
T ss_pred EEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccchheEEEcCCCCEEECCCccccccccC
Confidence 99999999999998765556899999999999999999999 889999999999999999999999999998865432
Q ss_pred ccc--eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhh----------hhHHHHHHhhhcCC
Q 040826 218 ESK--VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDA----------RDQLTRKARDVSMG 285 (347)
Q Consensus 218 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~----------~~~~~~~~~~~~~~ 285 (347)
... ......++..|+|||.+.+..++.++|+||||+++|+|+++..|...+... .............+
T Consensus 163 ~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (284)
T cd05079 163 KEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEG 242 (284)
T ss_pred ccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcC
Confidence 221 122345677899999998888999999999999999999987765432110 00011111111111
Q ss_pred CCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 040826 286 KRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKA 337 (347)
Q Consensus 286 ~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~ 337 (347)
.. .+........+.+++.+||+.+|++|||+.++++.|+++
T Consensus 243 ~~-----------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 243 KR-----------LPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred cc-----------CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 10 011112346799999999999999999999999999876
No 120
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.4e-41 Score=299.17 Aligned_cols=251 Identities=25% Similarity=0.382 Sum_probs=198.4
Q ss_pred CcccCCeeeecCCeeEEEEEeC------CCCEEEEEEcccCCCh---hHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEE
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP------SGQVVAIKHIYKSNNT---DSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYL 137 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~---~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 137 (347)
+|...+.||+|+||.||+|... ++..||+|++...... ..+.+|..++..++||||+++++++...+..++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 3445677999999999999853 2468999999755432 457889999999999999999999999899999
Q ss_pred EEeecCCCChHHHhhcC---------------CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCc
Q 040826 138 VYEFCAAGNLAQHLLRK---------------DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLE 202 (347)
Q Consensus 138 v~e~~~~gsL~~~l~~~---------------~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~ 202 (347)
++||+++++|.+++... ...+++..+..++.|++.||.||| +.+++||||||+||++++++.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLS---SHHVVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HcCccccccchhheEecCCCc
Confidence 99999999999998421 134788889999999999999999 889999999999999999999
Q ss_pred eEEeecccceecCCCcc-ceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHh
Q 040826 203 PKLSDFGLAKMLGMEES-KVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKAR 280 (347)
Q Consensus 203 ~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~ 280 (347)
+||+|||+++....... .......++..|+|||.+.+..++.++||||||+++|+|++ |..|+.... ..+. ..
T Consensus 163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~-~~~~----~~ 237 (283)
T cd05091 163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS-NQDV----IE 237 (283)
T ss_pred eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCC-HHHH----HH
Confidence 99999999876532221 11223345778999999988889999999999999999998 777765332 2221 22
Q ss_pred hhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 040826 281 DVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDK 336 (347)
Q Consensus 281 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~ 336 (347)
.+..+... ....+++..+.+++.+||+.+|.+||++++|+..|+.
T Consensus 238 ~i~~~~~~-----------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 238 MIRNRQVL-----------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHcCCcC-----------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 22222111 1122345679999999999999999999999999863
No 121
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.4e-41 Score=299.14 Aligned_cols=265 Identities=24% Similarity=0.313 Sum_probs=198.2
Q ss_pred CcccCCeeeecCCeeEEEEEe-----CCCCEEEEEEcccCCC--hhHHHHHHHHhhcCCCCcceeeeeEEEe--CCeEEE
Q 040826 67 NDWDRRFLGRGSAGLVYKGVL-----PSGQVVAIKHIYKSNN--TDSFSREVEGLSRVRHPNLVCLFGCCVE--GGEQYL 137 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~l 137 (347)
.|...+.||+|+||.||++.. .++..|++|.+..... ...+.+|++++++++|||++++++++.. ....++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 84 (284)
T cd05081 5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRL 84 (284)
T ss_pred cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEE
Confidence 456678899999999999974 2578999999865443 3468899999999999999999998754 346899
Q ss_pred EEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCC
Q 040826 138 VYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217 (347)
Q Consensus 138 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 217 (347)
|+||+++++|.+++......+++..++.++.|++.||.||| +.|++|+||||+||++++++.++|+|||++......
T Consensus 85 v~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 161 (284)
T cd05081 85 VMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLG---SKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQD 161 (284)
T ss_pred EEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHhhEEECCCCeEEECCCcccccccCC
Confidence 99999999999999766667899999999999999999999 889999999999999999999999999999875432
Q ss_pred ccce--eecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCC---cccc
Q 040826 218 ESKV--FTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRP---IKDF 292 (347)
Q Consensus 218 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 292 (347)
.... .....++..|+|||.+.+..++.++|+||||+++++|++|..++...... ..........+... ....
T Consensus 162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd05081 162 KEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE---FMRMMGNDKQGQMIVYHLIEL 238 (284)
T ss_pred CcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh---hhhhcccccccccchHHHHHH
Confidence 2111 11122345699999999888999999999999999999987765432110 00000000000000 0000
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 040826 293 EDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKA 337 (347)
Q Consensus 293 ~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~ 337 (347)
......-........++.+++.+||+.+|++|||+.+|++.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 239 LKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 000000011122345799999999999999999999999999875
No 122
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=3.1e-41 Score=304.40 Aligned_cols=260 Identities=26% Similarity=0.332 Sum_probs=192.8
Q ss_pred CcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccC----CChhHHHHHHHHhhcCCCCcceeeeeEEEeC-----CeEE
Q 040826 67 NDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKS----NNTDSFSREVEGLSRVRHPNLVCLFGCCVEG-----GEQY 136 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~ 136 (347)
+|...+.||+|+||.||+|.. .+|+.||+|.+... .....+.+|+.++++++||||+++++++... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 466778999999999999995 47899999988643 2234578999999999999999999987543 2579
Q ss_pred EEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCC
Q 040826 137 LVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM 216 (347)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 216 (347)
+||||+. ++|.+++... ..+++..+..++.|+++||.||| +.+++||||||+|||++.++.+||+|||++.....
T Consensus 81 lv~e~~~-~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 155 (338)
T cd07859 81 VVFELME-SDLHQVIKAN-DDLTPEHHQFFLYQLLRALKYIH---TANVFHRDLKPKNILANADCKLKICDFGLARVAFN 155 (338)
T ss_pred EEEecCC-CCHHHHHHhc-ccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEccCcccccccc
Confidence 9999996 4898888544 45899999999999999999999 88999999999999999999999999999876432
Q ss_pred Ccc--ceeecccCCCCccccccccC--CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCC-----
Q 040826 217 EES--KVFTDVRGTIGYMDPEYMTN--AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKR----- 287 (347)
Q Consensus 217 ~~~--~~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~----- 287 (347)
... .......++..|+|||++.+ ..++.++||||||+++|+|++|+.||...... ..+............
T Consensus 156 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~ 234 (338)
T cd07859 156 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV-HQLDLITDLLGTPSPETISR 234 (338)
T ss_pred ccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChH-HHHHHHHHHhCCCCHHHHHH
Confidence 111 11234568999999999875 67889999999999999999999999653221 111111000000000
Q ss_pred ----C-------cccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 288 ----P-------IKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 288 ----~-------~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
. ........+... .......+.+++.+||+.||++|||+.|+++.
T Consensus 235 i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 235 VRNEKARRYLSSMRKKQPVPFSQK-FPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred hhhhhHHHHHHhhcccCCCchHHh-cCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0 000000000000 00123568899999999999999999999864
No 123
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=4.8e-41 Score=292.36 Aligned_cols=249 Identities=23% Similarity=0.311 Sum_probs=200.0
Q ss_pred cCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCCC-------hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNN-------TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYL 137 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-------~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 137 (347)
++|...+.||+|++|.||.+.. .+++.+++|.+..... ...+.+|++++++++||||+++++++.+....++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 4677889999999999999995 4689999998864321 2357789999999999999999999999999999
Q ss_pred EEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCC
Q 040826 138 VYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217 (347)
Q Consensus 138 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 217 (347)
++||+++++|.+++... ..+++.....++.|++.|+.||| +.+++|+||+|+||++++++.++|+|||++......
T Consensus 82 v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~ 157 (263)
T cd06625 82 FMEYMPGGSVKDQLKAY-GALTETVTRKYTRQILEGVEYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTI 157 (263)
T ss_pred EEEECCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecccc
Confidence 99999999999988654 45889999999999999999999 889999999999999999999999999998765322
Q ss_pred cccee--ecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCC
Q 040826 218 ESKVF--TDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDP 295 (347)
Q Consensus 218 ~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (347)
..... ....++..|+|||.+.+..++.++|+||||+++|+|++|+.||........ .......... +
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~----~~~~~~~~~~-------~ 226 (263)
T cd06625 158 CSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAA----IFKIATQPTN-------P 226 (263)
T ss_pred ccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHH----HHHHhccCCC-------C
Confidence 11111 234577899999999998899999999999999999999999864322211 1111111110 1
Q ss_pred CCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 296 RLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 296 ~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
..+......+.+++.+||+.+|.+|||+.++++.
T Consensus 227 ----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 227 ----QLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred ----CCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 1122233578999999999999999999999864
No 124
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-42 Score=318.92 Aligned_cols=252 Identities=23% Similarity=0.295 Sum_probs=201.6
Q ss_pred CcccCCeeeecCCeeEEEEEeCCC-CEEEEEEcccCCC--hhHHHHHHHHhhcCC-CCcceeeee-EEEe------CCeE
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLPSG-QVVAIKHIYKSNN--TDSFSREVEGLSRVR-HPNLVCLFG-CCVE------GGEQ 135 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~~~-~~vavK~~~~~~~--~~~~~~e~~~l~~l~-h~niv~~~~-~~~~------~~~~ 135 (347)
+....+.|.+|||+.||++....+ ..+|+|++..... .+.+.+|+++|+.|+ |+|||.+++ .... .-++
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Ev 117 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEV 117 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEE
Confidence 455667899999999999996655 9999999876633 246889999999997 999999999 3322 1367
Q ss_pred EEEEeecCCCChHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceec
Q 040826 136 YLVYEFCAAGNLAQHLLR-KDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKML 214 (347)
Q Consensus 136 ~lv~e~~~~gsL~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~ 214 (347)
+|+||||.||.|.|++.+ ....|++.++++|+.|+++|+++||.. ..++||||||-+||||+.+|..||||||.+...
T Consensus 118 llLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~ 196 (738)
T KOG1989|consen 118 LLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSATTK 196 (738)
T ss_pred EeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcccccccc
Confidence 899999999999999964 234499999999999999999999965 567999999999999999999999999988753
Q ss_pred CCCccce--e------ecccCCCCccccccc---cCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhc
Q 040826 215 GMEESKV--F------TDVRGTIGYMDPEYM---TNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVS 283 (347)
Q Consensus 215 ~~~~~~~--~------~~~~~~~~y~aPE~~---~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~ 283 (347)
....... . -....|+.|++||.+ .+.++++|+|||+|||+||-|+...+||+.... ..+.
T Consensus 197 ~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~---------laIl 267 (738)
T KOG1989|consen 197 ILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK---------LAIL 267 (738)
T ss_pred cCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc---------eeEE
Confidence 2222110 0 112469999999966 678999999999999999999999999984311 1122
Q ss_pred CCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 040826 284 MGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAW 338 (347)
Q Consensus 284 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~ 338 (347)
.+. +.-+-.+.....+..||..||+.||++||++-++++.+-++.
T Consensus 268 ng~----------Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~ 312 (738)
T KOG1989|consen 268 NGN----------YSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELA 312 (738)
T ss_pred ecc----------ccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHh
Confidence 222 211222466789999999999999999999999999998874
No 125
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=6.9e-42 Score=306.86 Aligned_cols=240 Identities=24% Similarity=0.294 Sum_probs=193.7
Q ss_pred CeeeecCCeeEEEEEe-CCCCEEEEEEcccCC-----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCCC
Q 040826 72 RFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN-----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 145 (347)
+.||+|+||.||++.. .+|..||+|.+.... ....+..|+.+++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 3599999999999995 478999999986531 2345678999999999999999999999999999999999999
Q ss_pred ChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccC-CCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeec
Q 040826 146 NLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYID-GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD 224 (347)
Q Consensus 146 sL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~-~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 224 (347)
+|.+++... ..+++..+..++.|++.||.||| + .|++||||||+||+++.++.+||+|||++...... ......
T Consensus 81 ~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH---~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~-~~~~~~ 155 (325)
T cd05594 81 ELFFHLSRE-RVFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD-GATMKT 155 (325)
T ss_pred cHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCC-Cccccc
Confidence 999888544 45899999999999999999999 5 69999999999999999999999999998753211 222234
Q ss_pred ccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHH
Q 040826 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRA 304 (347)
Q Consensus 225 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 304 (347)
..|+..|+|||++.+..++.++||||||+++|+|++|..||...... .....+....... +..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~-----~~~~~i~~~~~~~------------p~~ 218 (325)
T cd05594 156 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KLFELILMEEIRF------------PRT 218 (325)
T ss_pred ccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH-----HHHHHHhcCCCCC------------CCC
Confidence 56899999999999989999999999999999999999999743221 1111111111111 111
Q ss_pred HHHHHHHHHHHhccCCCCCCC-----CHHHHHHH
Q 040826 305 DFESILKIAVLCVAKSSKGRP-----TIDVVYEE 333 (347)
Q Consensus 305 ~~~~l~~l~~~cl~~~p~~Rp-----s~~ei~~~ 333 (347)
...++.+++.+||+.||.+|+ ++.++++.
T Consensus 219 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 219 LSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred CCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 235789999999999999996 89998754
No 126
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.8e-42 Score=282.87 Aligned_cols=253 Identities=25% Similarity=0.376 Sum_probs=209.9
Q ss_pred HHHHhcCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC------Ch----hHHHHHHHHhhcCC-CCcceeeeeE
Q 040826 61 IENAINNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN------NT----DSFSREVEGLSRVR-HPNLVCLFGC 128 (347)
Q Consensus 61 ~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~------~~----~~~~~e~~~l~~l~-h~niv~~~~~ 128 (347)
-....+.|...+.+|.|..+.|-++.. .+|...|+|++.-.. .. +...+|+.+|+++. ||+|+.+.++
T Consensus 12 a~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ 91 (411)
T KOG0599|consen 12 AKGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDV 91 (411)
T ss_pred HhhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeee
Confidence 344567888889999999999999984 578899999884321 11 24668999999995 9999999999
Q ss_pred EEeCCeEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeec
Q 040826 129 CVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDF 208 (347)
Q Consensus 129 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~df 208 (347)
++++...++|+|.|+.|.|.|++... -.+++...++|++|+.+|++||| .++|+||||||+|||++++.+++|+||
T Consensus 92 yes~sF~FlVFdl~prGELFDyLts~-VtlSEK~tR~iMrqlfegVeylH---a~~IVHRDLKpENILlddn~~i~isDF 167 (411)
T KOG0599|consen 92 YESDAFVFLVFDLMPRGELFDYLTSK-VTLSEKETRRIMRQLFEGVEYLH---ARNIVHRDLKPENILLDDNMNIKISDF 167 (411)
T ss_pred ccCcchhhhhhhhcccchHHHHhhhh-eeecHHHHHHHHHHHHHHHHHHH---HhhhhhcccChhheeeccccceEEecc
Confidence 99999999999999999999999543 45899999999999999999999 899999999999999999999999999
Q ss_pred ccceecCCCccceeecccCCCCcccccccc------CCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhh
Q 040826 209 GLAKMLGMEESKVFTDVRGTIGYMDPEYMT------NAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDV 282 (347)
Q Consensus 209 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~------~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~ 282 (347)
|.+..+. ........+||++|+|||.+. ...|+..+|.||+|+++|-|+.|.+||-. ..++ ...+.+
T Consensus 168 GFa~~l~--~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwH----RkQm-lMLR~I 240 (411)
T KOG0599|consen 168 GFACQLE--PGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWH----RKQM-LMLRMI 240 (411)
T ss_pred ceeeccC--CchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhH----HHHH-HHHHHH
Confidence 9999874 445566789999999999874 34689999999999999999999999862 2332 234445
Q ss_pred cCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 283 SMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 283 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
..|.. ++.+|.+. +.+++..+|+.+||+.||++|.|++|.+.
T Consensus 241 meGky---qF~speWa-----dis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 241 MEGKY---QFRSPEWA-----DISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred Hhccc---ccCCcchh-----hccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 55543 34445443 34467999999999999999999999986
No 127
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=2.6e-41 Score=300.23 Aligned_cols=256 Identities=25% Similarity=0.377 Sum_probs=200.8
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCC--EEEEEEcccCCC---hhHHHHHHHHhhcC-CCCcceeeeeEEEeCCeEEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQ--VVAIKHIYKSNN---TDSFSREVEGLSRV-RHPNLVCLFGCCVEGGEQYLV 138 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~--~vavK~~~~~~~---~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv 138 (347)
++|...+.||+|+||.||+|... +|. .+++|.+..... ...+.+|+.++.++ +|+|++++++++..++..+++
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 46677788999999999999954 454 457777654322 24678899999999 899999999999999999999
Q ss_pred EeecCCCChHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCce
Q 040826 139 YEFCAAGNLAQHLLRKD---------------SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP 203 (347)
Q Consensus 139 ~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~ 203 (347)
+||+++++|.+++.... ..+++..++.++.|++.|++||| ++|++||||||+||+++.++.+
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEecCCCcE
Confidence 99999999999986432 35789999999999999999999 8899999999999999999999
Q ss_pred EEeecccceecCCCccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhh
Q 040826 204 KLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDV 282 (347)
Q Consensus 204 kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~ 282 (347)
+|+|||++..... .........+..|+|||.+.+..++.++||||||+++|+|+| |..||...... + .....
T Consensus 164 kl~dfg~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~----~~~~~ 236 (303)
T cd05088 164 KIADFGLSRGQEV--YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-E----LYEKL 236 (303)
T ss_pred EeCccccCcccch--hhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH-H----HHHHH
Confidence 9999999864211 111111234667999999988889999999999999999998 89888633221 1 11111
Q ss_pred cCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhh
Q 040826 283 SMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWKNTM 342 (347)
Q Consensus 283 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~~~~ 342 (347)
..+... ........++.+++.+||+.+|++|||+.+++..|+.++.+..
T Consensus 237 ~~~~~~-----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~ 285 (303)
T cd05088 237 PQGYRL-----------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 285 (303)
T ss_pred hcCCcC-----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhh
Confidence 111100 0011123568999999999999999999999999999987765
No 128
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=4.8e-41 Score=298.33 Aligned_cols=255 Identities=27% Similarity=0.377 Sum_probs=202.7
Q ss_pred hcCcccCCeeeecCCeeEEEEEeC------CCCEEEEEEcccCCC---hhHHHHHHHHhhcC-CCCcceeeeeEEEeCCe
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVLP------SGQVVAIKHIYKSNN---TDSFSREVEGLSRV-RHPNLVCLFGCCVEGGE 134 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~---~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 134 (347)
.++|...+.||+|+||.||++... ++..+|+|.+..... ...+.+|+.+++++ +||||+++++++...+.
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 456888899999999999999731 345799998875432 34688999999999 79999999999999999
Q ss_pred EEEEEeecCCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeeccccee
Q 040826 135 QYLVYEFCAAGNLAQHLLRKD-SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKM 213 (347)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~ 213 (347)
.+++|||+++|+|.+++.... ..+++.++..++.|++.|+.||| +++++|+||||+||+++.++.++++|||++..
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~ 190 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNVLLTHGKIVKICDFGLARD 190 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeehhhhccceEEEcCCCeEEECCCccccc
Confidence 999999999999999986533 34899999999999999999999 78999999999999999999999999999886
Q ss_pred cCCCccc-eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCccc
Q 040826 214 LGMEESK-VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKD 291 (347)
Q Consensus 214 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (347)
....... ......++..|+|||.+.+..++.++||||+|+++|+|++ |..||........ ..... ..+...
T Consensus 191 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~-~~~~~---~~~~~~--- 263 (302)
T cd05055 191 IMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSK-FYKLI---KEGYRM--- 263 (302)
T ss_pred ccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHH-HHHHH---HcCCcC---
Confidence 5422211 1222345778999999998889999999999999999998 8888764332211 11111 111100
Q ss_pred ccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 040826 292 FEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKA 337 (347)
Q Consensus 292 ~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~ 337 (347)
.. ......++.+++.+||+.+|++|||+.++++.|+++
T Consensus 264 ----~~----~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 264 ----AQ----PEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred ----CC----CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 00 011235799999999999999999999999999875
No 129
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=2.7e-41 Score=293.62 Aligned_cols=252 Identities=23% Similarity=0.361 Sum_probs=202.8
Q ss_pred hcCcccCCeeeecCCeeEEEEEeCCCCEEEEEEcccCCC-hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecC
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNN-TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCA 143 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 143 (347)
.++|...++||+|+||.||++...++..+++|.+..... ...+.+|+.++++++|+|++++++++.. ...+++|||++
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~ 83 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMA 83 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCC
Confidence 356778899999999999999987788899998876443 4578899999999999999999999877 77899999999
Q ss_pred CCChHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcccee
Q 040826 144 AGNLAQHLLR-KDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVF 222 (347)
Q Consensus 144 ~gsL~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 222 (347)
+++|.+++.. ....+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||.+...........
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 160 (260)
T cd05073 84 KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR 160 (260)
T ss_pred CCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcccc
Confidence 9999999865 3456888999999999999999999 78999999999999999999999999999876543222222
Q ss_pred ecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCC
Q 040826 223 TDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNI 301 (347)
Q Consensus 223 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 301 (347)
....++..|+|||.+.+..++.++|+||||+++|++++ |..||...... +... ....+.. . ..
T Consensus 161 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~-~~~~----~~~~~~~-~----------~~ 224 (260)
T cd05073 161 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP-EVIR----ALERGYR-M----------PR 224 (260)
T ss_pred cCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH-HHHH----HHhCCCC-C----------CC
Confidence 33345678999999998889999999999999999999 88887643211 1111 1111110 0 01
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 040826 302 NRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDK 336 (347)
Q Consensus 302 ~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~ 336 (347)
......++.+++.+||+.+|++||++.++.+.|++
T Consensus 225 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 225 PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred cccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 11233579999999999999999999999999875
No 130
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.7e-41 Score=303.71 Aligned_cols=240 Identities=26% Similarity=0.362 Sum_probs=192.3
Q ss_pred CeeeecCCeeEEEEEeC-CCCEEEEEEcccC-----CChhHHHHHHHHhhcC-CCCcceeeeeEEEeCCeEEEEEeecCC
Q 040826 72 RFLGRGSAGLVYKGVLP-SGQVVAIKHIYKS-----NNTDSFSREVEGLSRV-RHPNLVCLFGCCVEGGEQYLVYEFCAA 144 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-----~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 144 (347)
+.||+|+||.||+|... +|+.||+|.+... .....+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 35999999999999954 6889999998653 2234566788888766 799999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeec
Q 040826 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD 224 (347)
Q Consensus 145 gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 224 (347)
|+|.+++... ..+++..+..++.|++.||.||| +.+++||||||+||+++.++.++|+|||++...... ......
T Consensus 81 ~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~-~~~~~~ 155 (321)
T cd05591 81 GDLMFQIQRS-RKFDEPRSRFYAAEVTLALMFLH---RHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILN-GVTTTT 155 (321)
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeecccceecccC-Cccccc
Confidence 9999888654 45889999999999999999999 889999999999999999999999999998764322 222334
Q ss_pred ccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHH
Q 040826 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRA 304 (347)
Q Consensus 225 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 304 (347)
..|+..|+|||.+.+..++.++||||||+++|+|++|+.||...... ... ..+..+..... ..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~-~~~----~~i~~~~~~~p--------~~---- 218 (321)
T cd05591 156 FCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNED-DLF----ESILHDDVLYP--------VW---- 218 (321)
T ss_pred cccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHH-HHH----HHHHcCCCCCC--------CC----
Confidence 56899999999999989999999999999999999999999754321 111 22222211111 11
Q ss_pred HHHHHHHHHHHhccCCCCCCC-------CHHHHHHH
Q 040826 305 DFESILKIAVLCVAKSSKGRP-------TIDVVYEE 333 (347)
Q Consensus 305 ~~~~l~~l~~~cl~~~p~~Rp-------s~~ei~~~ 333 (347)
...++.+++.+||+.||++|| ++.++++.
T Consensus 219 ~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 219 LSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred CCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 225788999999999999999 77777653
No 131
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=2.9e-41 Score=302.68 Aligned_cols=242 Identities=27% Similarity=0.354 Sum_probs=191.0
Q ss_pred cccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC-----ChhHHHHHHHHh---hcCCCCcceeeeeEEEeCCeEEEE
Q 040826 68 DWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN-----NTDSFSREVEGL---SRVRHPNLVCLFGCCVEGGEQYLV 138 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~e~~~l---~~l~h~niv~~~~~~~~~~~~~lv 138 (347)
|...+.||+|+||.||+|... +|+.||+|.+.... ..+.+.+|..++ +.++||||+++++++.+.+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 445678999999999999954 68999999986432 223455665554 567899999999999999999999
Q ss_pred EeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCc
Q 040826 139 YEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE 218 (347)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 218 (347)
|||+++++|...+.. ..+++..+..++.|++.||.||| +.|++||||||+||+++.++.+||+|||++..... .
T Consensus 81 ~E~~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~-~ 154 (324)
T cd05589 81 MEYAAGGDLMMHIHT--DVFSEPRAVFYAACVVLGLQYLH---ENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMG-F 154 (324)
T ss_pred EcCCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCcEEeCcccCCccCCC-C
Confidence 999999999887743 46899999999999999999999 88999999999999999999999999999875321 1
Q ss_pred cceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCC
Q 040826 219 SKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLN 298 (347)
Q Consensus 219 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 298 (347)
........|+..|+|||.+.+..++.++|+||||+++|+|++|+.||...... +... .+.......
T Consensus 155 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~-~~~~----~i~~~~~~~--------- 220 (324)
T cd05589 155 GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE-EVFD----SIVNDEVRY--------- 220 (324)
T ss_pred CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH-HHHH----HHHhCCCCC---------
Confidence 22233456899999999999989999999999999999999999999754322 1111 111111111
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q 040826 299 GNINRADFESILKIAVLCVAKSSKGRP-----TIDVVYE 332 (347)
Q Consensus 299 ~~~~~~~~~~l~~l~~~cl~~~p~~Rp-----s~~ei~~ 332 (347)
+......+.+++.+||+.||.+|| ++.++++
T Consensus 221 ---p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 221 ---PRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred ---CCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 112235688999999999999999 4666654
No 132
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=3.7e-41 Score=300.83 Aligned_cols=238 Identities=24% Similarity=0.325 Sum_probs=188.8
Q ss_pred CeeeecCCeeEEEEEeC-CCCEEEEEEcccC-----CChhHHHHHHHHhhc-CCCCcceeeeeEEEeCCeEEEEEeecCC
Q 040826 72 RFLGRGSAGLVYKGVLP-SGQVVAIKHIYKS-----NNTDSFSREVEGLSR-VRHPNLVCLFGCCVEGGEQYLVYEFCAA 144 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-----~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~~~~ 144 (347)
+.||+|+||.||+|... +++.||+|.+... ........|..++.. .+||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999954 6889999988653 223345566666654 4799999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeec
Q 040826 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD 224 (347)
Q Consensus 145 gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 224 (347)
|+|.+++... ..+++..+..++.|++.||.||| +.+++||||||+||+++.++.++|+|||++....... .....
T Consensus 81 g~L~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-~~~~~ 155 (316)
T cd05592 81 GDLMFHIQSS-GRFDEARARFYAAEIICGLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-GKAST 155 (316)
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-Ccccc
Confidence 9999988654 35899999999999999999999 7899999999999999999999999999997643222 22334
Q ss_pred ccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHH
Q 040826 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRA 304 (347)
Q Consensus 225 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 304 (347)
..||..|+|||.+.+..++.++||||||+++|+|++|+.||...... ... ..+...... ++..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~-~~~----~~i~~~~~~------------~~~~ 218 (316)
T cd05592 156 FCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED-ELF----DSILNDRPH------------FPRW 218 (316)
T ss_pred ccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH-HHH----HHHHcCCCC------------CCCC
Confidence 56899999999999989999999999999999999999999753321 111 111111111 1112
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHH-HHH
Q 040826 305 DFESILKIAVLCVAKSSKGRPTID-VVY 331 (347)
Q Consensus 305 ~~~~l~~l~~~cl~~~p~~Rps~~-ei~ 331 (347)
...++.+++.+||+.||.+||++. +++
T Consensus 219 ~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 219 ISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred CCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 235688999999999999999976 443
No 133
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=3.7e-41 Score=301.99 Aligned_cols=239 Identities=23% Similarity=0.302 Sum_probs=191.5
Q ss_pred CcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccC-----CChhHHHHHHHHhhcCCC-CcceeeeeEEEeCCeEEEEE
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKS-----NNTDSFSREVEGLSRVRH-PNLVCLFGCCVEGGEQYLVY 139 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-----~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~~~lv~ 139 (347)
+|...+.||+|+||.||+|... +++.||+|.+... .....+..|..++..+.| ++|+.+++++.+.+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 3667788999999999999954 6789999998653 233467788899998876 46888999999999999999
Q ss_pred eecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcc
Q 040826 140 EFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES 219 (347)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 219 (347)
||+++|+|.+++... ..+++..+..++.|++.||.||| +.+++||||||+|||++.++.++|+|||++...... .
T Consensus 81 E~~~~g~L~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~-~ 155 (324)
T cd05587 81 EYVNGGDLMYHIQQV-GKFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG-G 155 (324)
T ss_pred cCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCC-C
Confidence 999999999988654 45899999999999999999999 889999999999999999999999999998753221 1
Q ss_pred ceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCC
Q 040826 220 KVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNG 299 (347)
Q Consensus 220 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 299 (347)
.......|+..|+|||++.+..++.++|+||+|+++|+|++|+.||...... ... ..+.......
T Consensus 156 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~-~~~----~~i~~~~~~~---------- 220 (324)
T cd05587 156 KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED-ELF----QSIMEHNVSY---------- 220 (324)
T ss_pred CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH-HHH----HHHHcCCCCC----------
Confidence 2233456899999999999999999999999999999999999999744321 111 1121111111
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCH
Q 040826 300 NINRADFESILKIAVLCVAKSSKGRPTI 327 (347)
Q Consensus 300 ~~~~~~~~~l~~l~~~cl~~~p~~Rps~ 327 (347)
+.....++.+++.+||+.||.+|++.
T Consensus 221 --~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 221 --PKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred --CCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 11223568899999999999999986
No 134
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=3.1e-41 Score=301.32 Aligned_cols=238 Identities=24% Similarity=0.326 Sum_probs=190.4
Q ss_pred CeeeecCCeeEEEEEeC-CCCEEEEEEcccC-----CChhHHHHHHHHhhcC-CCCcceeeeeEEEeCCeEEEEEeecCC
Q 040826 72 RFLGRGSAGLVYKGVLP-SGQVVAIKHIYKS-----NNTDSFSREVEGLSRV-RHPNLVCLFGCCVEGGEQYLVYEFCAA 144 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-----~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 144 (347)
+.||+|+||.||+|... +|+.||+|.+... ........|..++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 36999999999999965 6889999998653 2334566777777654 899999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeec
Q 040826 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD 224 (347)
Q Consensus 145 gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 224 (347)
|+|.+++... ..+++..+..++.|++.||.||| +.|++||||||+||+++.++.++|+|||++...... ......
T Consensus 81 g~L~~~i~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~ 155 (316)
T cd05620 81 GDLMFHIQDK-GRFDLYRATFYAAEIVCGLQFLH---SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG-DNRAST 155 (316)
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEeCccCCCeecccC-CCceec
Confidence 9999988654 45899999999999999999999 889999999999999999999999999998753211 122334
Q ss_pred ccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHH
Q 040826 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRA 304 (347)
Q Consensus 225 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 304 (347)
..|+..|+|||.+.+..++.++||||||+++|+|++|+.||...... . ....+....... ...
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~--~---~~~~~~~~~~~~--------~~~---- 218 (316)
T cd05620 156 FCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED--E---LFESIRVDTPHY--------PRW---- 218 (316)
T ss_pred cCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--H---HHHHHHhCCCCC--------CCC----
Confidence 56899999999999999999999999999999999999999743321 1 112221111111 111
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHH-HHH
Q 040826 305 DFESILKIAVLCVAKSSKGRPTID-VVY 331 (347)
Q Consensus 305 ~~~~l~~l~~~cl~~~p~~Rps~~-ei~ 331 (347)
...++.+++.+||+.||++||++. +++
T Consensus 219 ~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 219 ITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred CCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 224688999999999999999985 554
No 135
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=3.5e-41 Score=292.00 Aligned_cols=247 Identities=23% Similarity=0.335 Sum_probs=200.0
Q ss_pred CcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC---ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeec
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN---NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFC 142 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 142 (347)
+|...+.||+|+||.||++... ++..+++|.+.... ..+.+.+|+.+++.++|+|++++++.+.+++..++++||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 3566788999999999999954 68899999875432 3456788999999999999999999999999999999999
Q ss_pred CCCChHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccce
Q 040826 143 AAGNLAQHLLR-KDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKV 221 (347)
Q Consensus 143 ~~gsL~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 221 (347)
++++|.+++.. ....+++.....++.|++.||.||| +.+++|+||+|+||++++++.++++|||.+...... ...
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~-~~~ 156 (255)
T cd08219 81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIH---EKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSP-GAY 156 (255)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEECCCCcEEEcccCcceeeccc-ccc
Confidence 99999998864 3456899999999999999999999 889999999999999999999999999998765322 222
Q ss_pred eecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCC
Q 040826 222 FTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNI 301 (347)
Q Consensus 222 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 301 (347)
.....++..|+|||.+.+..++.++|+||||+++|+|++|..||...... . .......+... ..
T Consensus 157 ~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~-~----~~~~~~~~~~~-----------~~ 220 (255)
T cd08219 157 ACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWK-N----LILKVCQGSYK-----------PL 220 (255)
T ss_pred cccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHH-H----HHHHHhcCCCC-----------CC
Confidence 23356888999999999888999999999999999999999999743221 1 11111111111 01
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 302 NRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 302 ~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
+......+.+++.+||+.||++|||+.+|+..
T Consensus 221 ~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 221 PSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 11223568999999999999999999999864
No 136
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.5e-41 Score=310.94 Aligned_cols=250 Identities=22% Similarity=0.283 Sum_probs=194.1
Q ss_pred CcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC-----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEe
Q 040826 67 NDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN-----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYE 140 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 140 (347)
.|...+.||+|+||.||+|.. .+++.+|+|.+.... ....+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 466778899999999999984 578899999986532 23467889999999999999999999999999999999
Q ss_pred ecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcc-
Q 040826 141 FCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES- 219 (347)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~- 219 (347)
|+++|+|.+++.+. ..+++..+..++.|++.||.||| +.|++||||||+|||++.++.++|+|||++........
T Consensus 82 ~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~aL~~LH---~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~ 157 (381)
T cd05626 82 YIPGGDMMSLLIRM-EVFPEVLARFYIAELTLAIESVH---KMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNS 157 (381)
T ss_pred cCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccc
Confidence 99999999998654 35889999999999999999999 88999999999999999999999999998753210000
Q ss_pred ---------------------------------------------ceeecccCCCCccccccccCCccCCcccHHHHHHH
Q 040826 220 ---------------------------------------------KVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIV 254 (347)
Q Consensus 220 ---------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i 254 (347)
.......||..|+|||.+.+..++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~i 237 (381)
T cd05626 158 KYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVI 237 (381)
T ss_pred ccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhH
Confidence 00122468999999999998889999999999999
Q ss_pred HHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHH--hccCCCCCCCCHHHHHH
Q 040826 255 ALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVL--CVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 255 l~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~--cl~~~p~~Rps~~ei~~ 332 (347)
+|+|++|..||........... .... ....... . ...++ .++.+|+.+ |+..+|..||++.+++.
T Consensus 238 l~elltG~~Pf~~~~~~~~~~~-i~~~--~~~~~~~-----~-~~~~s----~~~~dli~~ll~~~~~~~~R~~~~~~l~ 304 (381)
T cd05626 238 LFEMLVGQPPFLAPTPTETQLK-VINW--ENTLHIP-----P-QVKLS----PEAVDLITKLCCSAEERLGRNGADDIKA 304 (381)
T ss_pred HHHHHhCCCCCcCCCHHHHHHH-HHcc--ccccCCC-----C-CCCCC----HHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 9999999999975443222211 1100 0000000 0 00122 456677766 56677777999999986
Q ss_pred H
Q 040826 333 E 333 (347)
Q Consensus 333 ~ 333 (347)
+
T Consensus 305 h 305 (381)
T cd05626 305 H 305 (381)
T ss_pred C
Confidence 4
No 137
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=4.1e-41 Score=300.44 Aligned_cols=238 Identities=26% Similarity=0.349 Sum_probs=190.2
Q ss_pred CeeeecCCeeEEEEEeC-CCCEEEEEEcccC-----CChhHHHHHHHHhhcC-CCCcceeeeeEEEeCCeEEEEEeecCC
Q 040826 72 RFLGRGSAGLVYKGVLP-SGQVVAIKHIYKS-----NNTDSFSREVEGLSRV-RHPNLVCLFGCCVEGGEQYLVYEFCAA 144 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-----~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 144 (347)
+.||+|+||.||+|... +++.||+|.+... ........|..++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999964 5789999998653 2234566677777754 899999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeec
Q 040826 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD 224 (347)
Q Consensus 145 gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 224 (347)
|+|.+++... ..+++..+..++.|++.||.||| +.+++||||||+||+++.++.++|+|||++...... ......
T Consensus 81 g~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~ 155 (316)
T cd05619 81 GDLMFHIQSC-HKFDLPRATFYAAEIICGLQFLH---SKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLG-DAKTCT 155 (316)
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCC-CCceee
Confidence 9999988653 45889999999999999999999 889999999999999999999999999998753221 122334
Q ss_pred ccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHH
Q 040826 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRA 304 (347)
Q Consensus 225 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 304 (347)
..|+..|+|||.+.+..++.++||||||+++|+|++|+.||...... . ....+....... +..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~-~----~~~~i~~~~~~~------------~~~ 218 (316)
T cd05619 156 FCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE-E----LFQSIRMDNPCY------------PRW 218 (316)
T ss_pred ecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH-H----HHHHHHhCCCCC------------Ccc
Confidence 56899999999999989999999999999999999999999753221 1 111111111111 111
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHH-HHH
Q 040826 305 DFESILKIAVLCVAKSSKGRPTID-VVY 331 (347)
Q Consensus 305 ~~~~l~~l~~~cl~~~p~~Rps~~-ei~ 331 (347)
...++.+++.+||+.||.+||++. ++.
T Consensus 219 ~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 219 LTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred CCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 235688999999999999999997 554
No 138
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=3.9e-41 Score=306.39 Aligned_cols=251 Identities=24% Similarity=0.314 Sum_probs=193.3
Q ss_pred cCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC-----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN-----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVY 139 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 139 (347)
++|...+.||+|+||.||++.. .+|+.||+|.+.... ....+.+|..++.+++|+||+++++.+.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 3677888999999999999985 468999999986532 2245778999999999999999999999999999999
Q ss_pred eecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcc
Q 040826 140 EFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES 219 (347)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 219 (347)
||+++|+|.+++.+. ..+++..+..++.|++.||.||| +.|++||||||+|||++.++.++|+|||++........
T Consensus 81 E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH---~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~ 156 (363)
T cd05628 81 EFLPGGDMMTLLMKK-DTLTEEETQFYIAETVLAIDSIH---QLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHR 156 (363)
T ss_pred cCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCCEEEeeccCccccccccc
Confidence 999999999998654 45899999999999999999999 88999999999999999999999999999875421100
Q ss_pred ----------------------------------ceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCc
Q 040826 220 ----------------------------------KVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVI 265 (347)
Q Consensus 220 ----------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~ 265 (347)
.......||..|+|||.+.+..++.++|||||||++|+|++|+.||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf 236 (363)
T cd05628 157 TEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF 236 (363)
T ss_pred ccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCC
Confidence 0012346899999999999999999999999999999999999999
Q ss_pred CCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhc--cCCCCCCCCHHHHHHH
Q 040826 266 ELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCV--AKSSKGRPTIDVVYEE 333 (347)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl--~~~p~~Rps~~ei~~~ 333 (347)
...... +.... +....... ..|.. ..++ +++.+++.+++ ..++..||++.||++.
T Consensus 237 ~~~~~~-~~~~~----i~~~~~~~---~~p~~-~~~s----~~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 237 CSETPQ-ETYKK----VMNWKETL---IFPPE-VPIS----EKAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CCCCHH-HHHHH----HHcCcCcc---cCCCc-CCCC----HHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 754322 11111 11111000 00100 0122 34566666533 3344567999999875
No 139
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=7.9e-41 Score=293.38 Aligned_cols=242 Identities=25% Similarity=0.283 Sum_probs=192.6
Q ss_pred eeecCCeeEEEEEeC-CCCEEEEEEcccCC-----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCCCCh
Q 040826 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSN-----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNL 147 (347)
Q Consensus 74 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 147 (347)
||+|+||.||++... +|+.+|+|.+.... .......|++++++++||||+++++.+.++...+++|||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999854 68999999886422 223456799999999999999999999999999999999999999
Q ss_pred HHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeeccc
Q 040826 148 AQHLLRK-DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVR 226 (347)
Q Consensus 148 ~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 226 (347)
.+++... ...+++..+..++.|++.||.||| +.+++||||||+||+++.++.++|+|||++...... .......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~--~~~~~~~ 155 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLH---SMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG--KTITQRA 155 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCC--ceeeccC
Confidence 9888543 345889999999999999999999 889999999999999999999999999998865422 2223456
Q ss_pred CCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHH
Q 040826 227 GTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADF 306 (347)
Q Consensus 227 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 306 (347)
++..|+|||++.+..++.++|+||+|+++|+|++|+.||........ .....+......... ......
T Consensus 156 ~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~-----------~~~~~~ 223 (277)
T cd05607 156 GTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVA-KEELKRRTLEDEVKF-----------EHQNFT 223 (277)
T ss_pred CCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhh-HHHHHHHhhcccccc-----------ccccCC
Confidence 89999999999988899999999999999999999999874322111 111222221111110 001223
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 307 ESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 307 ~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
.++.+|+.+||+.||.+||+++|+++
T Consensus 224 ~~~~~li~~~L~~~P~~R~~~~~~~~ 249 (277)
T cd05607 224 EESKDICRLFLAKKPEDRLGSREKND 249 (277)
T ss_pred HHHHHHHHHHhccCHhhCCCCccchh
Confidence 57899999999999999999977654
No 140
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=2.8e-41 Score=303.27 Aligned_cols=244 Identities=24% Similarity=0.324 Sum_probs=191.8
Q ss_pred CeeeecCCeeEEEEEeC-CCCEEEEEEcccCC-----ChhHHHHHHHHhhcC-CCCcceeeeeEEEeCCeEEEEEeecCC
Q 040826 72 RFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN-----NTDSFSREVEGLSRV-RHPNLVCLFGCCVEGGEQYLVYEFCAA 144 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 144 (347)
+.||+|+||.||++... +++.||+|.+.... ....+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 36999999999999954 68899999987532 223577889999888 699999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeec
Q 040826 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD 224 (347)
Q Consensus 145 gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 224 (347)
|+|.+++... ..+++..+..++.|++.||.||| +.+++||||||+||+++.++.++|+|||++..... .......
T Consensus 81 g~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~-~~~~~~~ 155 (329)
T cd05588 81 GDLMFHMQRQ-RKLPEEHARFYSAEISLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIR-PGDTTST 155 (329)
T ss_pred CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEECcCcccccccc-CCCcccc
Confidence 9999888544 46899999999999999999999 88999999999999999999999999999874321 1222334
Q ss_pred ccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChh----hhhHHHHHHhhhcCCCCCcccccCCCCCCC
Q 040826 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFD----ARDQLTRKARDVSMGKRPIKDFEDPRLNGN 300 (347)
Q Consensus 225 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 300 (347)
..|+..|+|||++.+..++.++|+||||+++|+|++|+.||..... .........+.+.......
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 224 (329)
T cd05588 156 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRI----------- 224 (329)
T ss_pred ccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCC-----------
Confidence 5689999999999999999999999999999999999999963111 0011111111121111111
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCC------HHHHHH
Q 040826 301 INRADFESILKIAVLCVAKSSKGRPT------IDVVYE 332 (347)
Q Consensus 301 ~~~~~~~~l~~l~~~cl~~~p~~Rps------~~ei~~ 332 (347)
+.....++.+++.+||+.||.+||| +.++++
T Consensus 225 -p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 225 -PRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred -CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 1122356899999999999999998 566654
No 141
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.4e-41 Score=309.70 Aligned_cols=249 Identities=23% Similarity=0.309 Sum_probs=196.6
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC-----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN-----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVY 139 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 139 (347)
++|...+.||+|+||.||+|... +|+.||+|.+.... ....+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 36777889999999999999954 68999999986532 2345778999999999999999999999999999999
Q ss_pred eecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcc
Q 040826 140 EFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES 219 (347)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 219 (347)
||+++|+|.+++... ..+++..+..++.|++.||.||| +.+++||||||+|||++.++.++|+|||++........
T Consensus 81 E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 156 (364)
T cd05599 81 EYLPGGDMMTLLMKK-DTFTEEETRFYIAETILAIDSIH---KLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHR 156 (364)
T ss_pred CCCCCcHHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEeecccceecccccc
Confidence 999999999998654 35899999999999999999999 88999999999999999999999999999875421110
Q ss_pred c-------------------------------------eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCC
Q 040826 220 K-------------------------------------VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQ 262 (347)
Q Consensus 220 ~-------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~ 262 (347)
. ......||+.|+|||++.+..++.++|||||||++|+|++|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~ 236 (364)
T cd05599 157 TEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGY 236 (364)
T ss_pred ccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCC
Confidence 0 011235899999999999989999999999999999999999
Q ss_pred CCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCC---HHHHHH
Q 040826 263 KVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPT---IDVVYE 332 (347)
Q Consensus 263 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps---~~ei~~ 332 (347)
.||....... .. ..+........ .+. .....+++.+++.+|+. +|.+|++ +.++++
T Consensus 237 ~Pf~~~~~~~-~~----~~i~~~~~~~~---~~~-----~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 237 PPFCSDNPQE-TY----RKIINWKETLQ---FPD-----EVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred CCCCCCCHHH-HH----HHHHcCCCccC---CCC-----CCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 9997543221 11 11111111100 000 00123568888888996 9999998 888776
No 142
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=5.4e-41 Score=307.36 Aligned_cols=256 Identities=25% Similarity=0.364 Sum_probs=201.4
Q ss_pred hcCcccCCeeeecCCeeEEEEEeC------CCCEEEEEEcccCCC---hhHHHHHHHHhhcCC-CCcceeeeeEEEeCCe
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVLP------SGQVVAIKHIYKSNN---TDSFSREVEGLSRVR-HPNLVCLFGCCVEGGE 134 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~ 134 (347)
.++|...+.||+|+||.||+|.+. ++..||+|++..... ...+.+|+.++.++. ||||+++++++...+.
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~ 115 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGP 115 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCC
Confidence 345667788999999999999853 346899999976432 236888999999997 9999999999999889
Q ss_pred EEEEEeecCCCChHHHhhcCC-----------------------------------------------------------
Q 040826 135 QYLVYEFCAAGNLAQHLLRKD----------------------------------------------------------- 155 (347)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~~----------------------------------------------------------- 155 (347)
.++|+||+++|+|.+++....
T Consensus 116 ~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (401)
T cd05107 116 IYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDM 195 (401)
T ss_pred cEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcc
Confidence 999999999999999985421
Q ss_pred --------------------------------------CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEe
Q 040826 156 --------------------------------------SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILL 197 (347)
Q Consensus 156 --------------------------------------~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili 197 (347)
..+++...+.++.|++.||.||| +.+++|+||||+||++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrdlkp~NiLl 272 (401)
T cd05107 196 KGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLA---SKNCVHRDLAARNVLI 272 (401)
T ss_pred hhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHh---cCCcCcccCCcceEEE
Confidence 23567788899999999999999 8899999999999999
Q ss_pred cCCCceEEeecccceecCCCcc-ceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHH
Q 040826 198 TEKLEPKLSDFGLAKMLGMEES-KVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQL 275 (347)
Q Consensus 198 ~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~ 275 (347)
++++.++|+|||++........ .......++..|+|||.+.+..++.++|+||||+++|||++ |..||...... +..
T Consensus 273 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~-~~~ 351 (401)
T cd05107 273 CEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMN-EQF 351 (401)
T ss_pred eCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCch-HHH
Confidence 9999999999999986532211 11223356788999999998889999999999999999998 78887532211 111
Q ss_pred HHHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 040826 276 TRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAW 338 (347)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~ 338 (347)
. ..+..+... ..+.....++.+++.+||+.+|.+||++.+|++.|++++
T Consensus 352 ~---~~~~~~~~~-----------~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 352 Y---NAIKRGYRM-----------AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred H---HHHHcCCCC-----------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 1 111111110 011122367999999999999999999999999999875
No 143
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=8.9e-41 Score=290.58 Aligned_cols=250 Identities=24% Similarity=0.401 Sum_probs=193.6
Q ss_pred CeeeecCCeeEEEEEeC----CCCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEE-eCCeEEEEEeecC
Q 040826 72 RFLGRGSAGLVYKGVLP----SGQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCV-EGGEQYLVYEFCA 143 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e~~~ 143 (347)
+.||+|+||.||+|... ++..+|+|.+..... ...+.+|+.+++.++|||++++++++. .++..++++||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 35899999999999853 235799998865332 346778999999999999999999765 4556899999999
Q ss_pred CCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcc---c
Q 040826 144 AGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES---K 220 (347)
Q Consensus 144 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~---~ 220 (347)
+++|.+++.+.....++..+..++.|++.|+.||| +.+++|+||+|+||++++++.++|+|||++........ .
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 157 (262)
T cd05058 81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLA---SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVH 157 (262)
T ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCccccccccCCcceeec
Confidence 99999999766556788888999999999999999 78999999999999999999999999999875432111 1
Q ss_pred eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCC
Q 040826 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGN 300 (347)
Q Consensus 221 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 300 (347)
......++..|+|||.+.+..++.++||||||+++|+|++|..|+........ .......+....
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~----~~~~~~~~~~~~----------- 222 (262)
T cd05058 158 NHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFD----ITVYLLQGRRLL----------- 222 (262)
T ss_pred ccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHH----HHHHHhcCCCCC-----------
Confidence 11223457789999999888899999999999999999996554332222211 111121111110
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 040826 301 INRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWK 339 (347)
Q Consensus 301 ~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~ 339 (347)
.+...+..+.+++.+||+.+|++||++.+|++.|++++.
T Consensus 223 ~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 223 QPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 011223579999999999999999999999999999864
No 144
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=7e-41 Score=290.49 Aligned_cols=246 Identities=26% Similarity=0.410 Sum_probs=195.2
Q ss_pred CeeeecCCeeEEEEEeC-C---CCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCC
Q 040826 72 RFLGRGSAGLVYKGVLP-S---GQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAA 144 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~-~---~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 144 (347)
+.||+|+||.||+|.+. . +..+++|.+..... ...+.+|+++++.++|+|++++++++. .+..+++|||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 36999999999999843 2 26899999876554 346889999999999999999999876 4568999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceee-
Q 040826 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT- 223 (347)
Q Consensus 145 gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~- 223 (347)
++|.+++.... .+++..+..++.|++.|+.||| ..+++|+||+|+||+++.++.++|+|||++............
T Consensus 80 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~ 155 (257)
T cd05060 80 GPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLE---SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRAT 155 (257)
T ss_pred CcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHh---hcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccc
Confidence 99999997654 6899999999999999999999 789999999999999999999999999998866432221111
Q ss_pred -cccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCC
Q 040826 224 -DVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNI 301 (347)
Q Consensus 224 -~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 301 (347)
...++..|+|||.+.+..++.++|+||||+++|++++ |..||..... . ..... +...... ..
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~-~-~~~~~---~~~~~~~-----------~~ 219 (257)
T cd05060 156 TAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG-A-EVIAM---LESGERL-----------PR 219 (257)
T ss_pred cCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH-H-HHHHH---HHcCCcC-----------CC
Confidence 1223567999999998889999999999999999998 8888864322 1 11111 1111110 11
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 040826 302 NRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAW 338 (347)
Q Consensus 302 ~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~ 338 (347)
.......+.+++.+||+.+|++|||+.++++.|+++.
T Consensus 220 ~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 220 PEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 1123357999999999999999999999999998763
No 145
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=6.3e-41 Score=292.89 Aligned_cols=256 Identities=26% Similarity=0.358 Sum_probs=203.3
Q ss_pred cCcccCCeeeecCCeeEEEEEeCC----CCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLPS----GQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLV 138 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 138 (347)
++|...+.||+|+||.||+|...+ ...+++|....... .+.+.+|+..+++++|||++++++++.+ +..+++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 346677889999999999998543 24689998866543 3468899999999999999999998875 457899
Q ss_pred EeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCc
Q 040826 139 YEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE 218 (347)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 218 (347)
|||+++++|.+++......+++..++.++.|++.||.||| +.+++|+||+|+||+++.++.++++|||++.......
T Consensus 85 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 161 (270)
T cd05056 85 MELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLE---SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDES 161 (270)
T ss_pred EEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccChheEEEecCCCeEEccCceeeeccccc
Confidence 9999999999999766666899999999999999999999 8899999999999999999999999999988754332
Q ss_pred cceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCC
Q 040826 219 SKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRL 297 (347)
Q Consensus 219 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 297 (347)
........++..|+|||.+.+..++.++|+||||+++|++++ |..||...... ...... ..+...
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~-~~~~~~----~~~~~~--------- 227 (270)
T cd05056 162 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN-DVIGRI----ENGERL--------- 227 (270)
T ss_pred ceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH-HHHHHH----HcCCcC---------
Confidence 222222334568999999988889999999999999999986 99998644322 111111 111111
Q ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 040826 298 NGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWKNT 341 (347)
Q Consensus 298 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~~~ 341 (347)
........++.+++.+||..+|++|||+.++++.|+++.++.
T Consensus 228 --~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~~ 269 (270)
T cd05056 228 --PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQEE 269 (270)
T ss_pred --CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 011123457999999999999999999999999999987653
No 146
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=3.6e-41 Score=295.99 Aligned_cols=251 Identities=25% Similarity=0.381 Sum_probs=198.9
Q ss_pred cCcccCCeeeecCCeeEEEEEeC------CCCEEEEEEcccCCC--hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP------SGQVVAIKHIYKSNN--TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYL 137 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 137 (347)
+++...++||+|+||.||++... ++..+++|.+..... ...+.+|++.++.++|+||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 45667788999999999999632 356789998765432 3478899999999999999999999999899999
Q ss_pred EEeecCCCChHHHhhcCC--------------CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCce
Q 040826 138 VYEFCAAGNLAQHLLRKD--------------SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP 203 (347)
Q Consensus 138 v~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~ 203 (347)
++||+++++|.+++.... ..+++..++.++.|++.|++||| +.+++|+||||+||++++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLA---SLHFVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHH---HCCeecccccHhhEEEcCCCCE
Confidence 999999999999986532 34789999999999999999999 8899999999999999999999
Q ss_pred EEeecccceecCCCccc-eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhh
Q 040826 204 KLSDFGLAKMLGMEESK-VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARD 281 (347)
Q Consensus 204 kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~ 281 (347)
+|+|||++......... ......++..|+|||.+.+..++.++||||||+++|+|++ |..||...... +.. ..
T Consensus 162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-~~~----~~ 236 (280)
T cd05092 162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNT-EAI----EC 236 (280)
T ss_pred EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHH-HHH----HH
Confidence 99999998765322211 1222335678999999998899999999999999999998 88887533221 111 11
Q ss_pred hcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 040826 282 VSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEID 335 (347)
Q Consensus 282 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~ 335 (347)
...+... ..+..++..+.+++.+||+.||.+||++.+|++.|+
T Consensus 237 ~~~~~~~-----------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 237 ITQGREL-----------ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred HHcCccC-----------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 1111111 011123357999999999999999999999999886
No 147
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.6e-41 Score=304.84 Aligned_cols=239 Identities=24% Similarity=0.341 Sum_probs=187.9
Q ss_pred CeeeecCCeeEEEEEeC-CCCEEEEEEcccCC-----ChhHHHHHHHHhhcC-CCCcceeeeeEEEeCCeEEEEEeecCC
Q 040826 72 RFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN-----NTDSFSREVEGLSRV-RHPNLVCLFGCCVEGGEQYLVYEFCAA 144 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 144 (347)
+.||+|+||.||++... +++.+|+|.+.... ....+..|..++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 36999999999999954 68899999987532 223466788888776 799999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeec
Q 040826 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD 224 (347)
Q Consensus 145 gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 224 (347)
|+|.+++... ..+++..+..++.|++.||.||| +.+++||||||+||+++.++.++|+|||++..... .......
T Consensus 81 ~~L~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~-~~~~~~~ 155 (329)
T cd05618 81 GDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR-PGDTTST 155 (329)
T ss_pred CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCCEEEeeCCccccccC-CCCcccc
Confidence 9999887544 45899999999999999999999 88999999999999999999999999999875321 1122234
Q ss_pred ccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChh----hhhHHHHHHhhhcCCCCCcccccCCCCCCC
Q 040826 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFD----ARDQLTRKARDVSMGKRPIKDFEDPRLNGN 300 (347)
Q Consensus 225 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 300 (347)
..|+..|+|||.+.+..++.++|+||||+++|+|++|+.||..... ...........+......
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~------------ 223 (329)
T cd05618 156 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR------------ 223 (329)
T ss_pred ccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCC------------
Confidence 5689999999999999999999999999999999999999952110 011111111111111111
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCH
Q 040826 301 INRADFESILKIAVLCVAKSSKGRPTI 327 (347)
Q Consensus 301 ~~~~~~~~l~~l~~~cl~~~p~~Rps~ 327 (347)
++......+.+++.+||+.||.+|||+
T Consensus 224 ~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 224 IPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred CCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 112233568899999999999999984
No 148
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=6.5e-41 Score=294.39 Aligned_cols=256 Identities=21% Similarity=0.316 Sum_probs=203.9
Q ss_pred hcCcccCCeeeecCCeeEEEEEeCC-----CCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEe-CCeE
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVLPS-----GQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVE-GGEQ 135 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~ 135 (347)
.++|...+.||+|+||.||+|...+ +..|++|.+..... ...+.+|+..+++++|+|++++++++.. ....
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 4567788899999999999999654 68899998865433 3457889999999999999999998766 4678
Q ss_pred EEEEeecCCCChHHHhhcCC-------CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeec
Q 040826 136 YLVYEFCAAGNLAQHLLRKD-------SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDF 208 (347)
Q Consensus 136 ~lv~e~~~~gsL~~~l~~~~-------~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~df 208 (347)
+++++|+++++|.+++.... ..+++..+..++.|++.||.||| +.+++|+||+|+||++++++.++++||
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLH---KRGVIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCHhhEEEcCCCcEEECCC
Confidence 99999999999999985421 45899999999999999999999 789999999999999999999999999
Q ss_pred ccceecCCCccce-eecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCC
Q 040826 209 GLAKMLGMEESKV-FTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGK 286 (347)
Q Consensus 209 g~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 286 (347)
|+++.+....... .....++..|+|||.+.+..++.++||||||+++|++++ |+.||..... .... .....+.
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~---~~~~~~~ 236 (280)
T cd05043 162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP--FEMA---AYLKDGY 236 (280)
T ss_pred CCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH--HHHH---HHHHcCC
Confidence 9998654322221 122345678999999998889999999999999999999 9988864321 1111 1111111
Q ss_pred CCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 040826 287 RPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWK 339 (347)
Q Consensus 287 ~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~ 339 (347)
.. . ....+.+++.+++.+||+.+|++|||+.++++.|+++.+
T Consensus 237 ~~-~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 237 RL-A----------QPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred CC-C----------CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 10 0 011223579999999999999999999999999999864
No 149
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=4.1e-41 Score=293.92 Aligned_cols=252 Identities=27% Similarity=0.411 Sum_probs=200.5
Q ss_pred CcccCCeeeecCCeeEEEEEeC-CC---CEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEE
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP-SG---QVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVY 139 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~-~~---~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 139 (347)
.|...+.||+|+||.||+|... ++ ..|++|.+..... ...+..|+..++.++||||+++++++.++...++++
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence 4566788999999999999954 33 3699999875432 347889999999999999999999999989999999
Q ss_pred eecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcc
Q 040826 140 EFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES 219 (347)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 219 (347)
||+++++|.+++......+++..++.++.|++.|+.||| +.|++|+||+|+||+++.++.++++|||++........
T Consensus 85 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH---~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~ 161 (269)
T cd05065 85 EFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS 161 (269)
T ss_pred ecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccChheEEEcCCCcEEECCCccccccccCcc
Confidence 999999999999776667899999999999999999999 88999999999999999999999999999876532221
Q ss_pred ce-eec-cc--CCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccC
Q 040826 220 KV-FTD-VR--GTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFED 294 (347)
Q Consensus 220 ~~-~~~-~~--~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (347)
.. ... .. .+..|+|||.+.+..++.++||||||+++||+++ |..||...... +... .+.... ..
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~-~~~~----~i~~~~-~~----- 230 (269)
T cd05065 162 DPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-DVIN----AIEQDY-RL----- 230 (269)
T ss_pred ccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH-HHHH----HHHcCC-cC-----
Confidence 11 111 11 2457999999998899999999999999999886 88888643221 1111 111110 00
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 040826 295 PRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKA 337 (347)
Q Consensus 295 ~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~ 337 (347)
....+++..+.+++.+||+.+|++||++.+|+..|+++
T Consensus 231 -----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 231 -----PPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred -----CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11123346789999999999999999999999998875
No 150
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.9e-41 Score=308.58 Aligned_cols=252 Identities=20% Similarity=0.250 Sum_probs=198.1
Q ss_pred HhcCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccC-----CChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEE
Q 040826 64 AINNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKS-----NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYL 137 (347)
Q Consensus 64 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 137 (347)
..++|...+.||+|+||.||++... +++.+|+|.+... .....+.+|+.+++.++||||+++++++.+++..++
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 3577888999999999999999964 6889999988642 223457789999999999999999999999999999
Q ss_pred EEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCC
Q 040826 138 VYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217 (347)
Q Consensus 138 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 217 (347)
||||+++|+|.+++... .+++..+..++.|++.||.||| +.+++||||||+|||+++++.+||+|||++......
T Consensus 121 v~Ey~~gg~L~~~l~~~--~~~~~~~~~~~~qil~aL~~LH---~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~ 195 (370)
T cd05621 121 VMEYMPGGDLVNLMSNY--DVPEKWAKFYTAEVVLALDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDET 195 (370)
T ss_pred EEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEEecccceecccC
Confidence 99999999999988543 4788999999999999999999 889999999999999999999999999999876433
Q ss_pred ccceeecccCCCCccccccccCC----ccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCccccc
Q 040826 218 ESKVFTDVRGTIGYMDPEYMTNA----KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFE 293 (347)
Q Consensus 218 ~~~~~~~~~~~~~y~aPE~~~~~----~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (347)
.........||..|+|||.+.+. .++.++|+||+|+++|+|++|..||...... .... .+........
T Consensus 196 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~-~~~~----~i~~~~~~~~--- 267 (370)
T cd05621 196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV-GTYS----KIMDHKNSLN--- 267 (370)
T ss_pred CceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH-HHHH----HHHhCCcccC---
Confidence 22223455799999999998754 3788999999999999999999999754321 1112 1211111100
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhccCCCCC--CCCHHHHHHH
Q 040826 294 DPRLNGNINRADFESILKIAVLCVAKSSKG--RPTIDVVYEE 333 (347)
Q Consensus 294 ~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~--Rps~~ei~~~ 333 (347)
.|. .......+.+++.+|+..++.+ |||+.+++++
T Consensus 268 ~p~-----~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 268 FPE-----DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred CCC-----cccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 000 0122356888888899755543 8899998875
No 151
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-42 Score=307.85 Aligned_cols=254 Identities=27% Similarity=0.402 Sum_probs=215.2
Q ss_pred ccCCeeeecCCeeEEEEEeC---CCC--EEEEEEcccCC---ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEe
Q 040826 69 WDRRFLGRGSAGLVYKGVLP---SGQ--VVAIKHIYKSN---NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYE 140 (347)
Q Consensus 69 ~~~~~lg~G~~g~V~~~~~~---~~~--~vavK~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 140 (347)
...++||.|-||.||+|.+. .|+ .||||.-+.+. +.+.|..|..+|+.+.||||++++|+|.+. ..++|||
T Consensus 392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~WivmE 470 (974)
T KOG4257|consen 392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMWIVME 470 (974)
T ss_pred cHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ceeEEEe
Confidence 34577999999999999953 233 68888877643 356799999999999999999999998864 6889999
Q ss_pred ecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccc
Q 040826 141 FCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220 (347)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 220 (347)
.++.|.|..+++.+...++......++.|++.||+||| +..++||||..+|||+....-+||+|||+++.+..+...
T Consensus 471 L~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLe---SkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yY 547 (974)
T KOG4257|consen 471 LAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLE---SKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYY 547 (974)
T ss_pred cccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHH---hhchhhhhhhhhheeecCcceeeecccchhhhccccchh
Confidence 99999999999988888999999999999999999999 889999999999999999999999999999998877766
Q ss_pred eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCC
Q 040826 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNG 299 (347)
Q Consensus 221 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 299 (347)
..+...-+..|||||.+.-..++.+||||.||+.+||++. |.+||.+-... + +.-.+..|+ +.
T Consensus 548 kaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNs-D----VI~~iEnGe-----------Rl 611 (974)
T KOG4257|consen 548 KASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNS-D----VIGHIENGE-----------RL 611 (974)
T ss_pred hccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccccccc-c----eEEEecCCC-----------CC
Confidence 6666667889999999999999999999999999999876 88888742111 1 011111222 22
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhh
Q 040826 300 NINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWKNTM 342 (347)
Q Consensus 300 ~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~~~~ 342 (347)
+.++.|+..++.|+.+||+.+|.+||++.+|...|++++++..
T Consensus 612 P~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~qeek 654 (974)
T KOG4257|consen 612 PCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQEEK 654 (974)
T ss_pred CCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHHHhh
Confidence 5667888999999999999999999999999999999988543
No 152
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=6.7e-41 Score=290.42 Aligned_cols=247 Identities=28% Similarity=0.424 Sum_probs=201.9
Q ss_pred cCcccCCeeeecCCeeEEEEEeCCCCEEEEEEcccCCC-hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCC
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNN-TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAA 144 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 144 (347)
++|...+.||+|+||.||+|... |+.|++|.+..... ...+.+|+.++++++|+|++++++++.+.+..+++|||+++
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 84 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAK 84 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCC
Confidence 45677788999999999999974 78899999976654 56788999999999999999999999988899999999999
Q ss_pred CChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceee
Q 040826 145 GNLAQHLLRKD-SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT 223 (347)
Q Consensus 145 gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 223 (347)
++|.+++.... ..+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.++|+|||.+...... ..
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~----~~ 157 (256)
T cd05039 85 GSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQG----QD 157 (256)
T ss_pred CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccchhcccceEEEeCCCCEEEcccccccccccc----cc
Confidence 99999986543 36899999999999999999999 889999999999999999999999999998865211 11
Q ss_pred cccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCC
Q 040826 224 DVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNIN 302 (347)
Q Consensus 224 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 302 (347)
....+..|+|||.+.+..++.++|+||||++++++++ |..||..... .+ +..... ..... ..+
T Consensus 158 ~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-~~-~~~~~~---~~~~~-----------~~~ 221 (256)
T cd05039 158 SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-KD-VVPHVE---KGYRM-----------EAP 221 (256)
T ss_pred cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH-HH-HHHHHh---cCCCC-----------CCc
Confidence 2335678999999988889999999999999999997 8888764321 11 111111 11000 011
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 040826 303 RADFESILKIAVLCVAKSSKGRPTIDVVYEEIDK 336 (347)
Q Consensus 303 ~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~ 336 (347)
...++.+.+++.+||..+|++|||+.++++.|+.
T Consensus 222 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 222 EGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred cCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 1233679999999999999999999999999975
No 153
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=5.8e-41 Score=302.93 Aligned_cols=258 Identities=27% Similarity=0.393 Sum_probs=200.2
Q ss_pred hcCcccCCeeeecCCeeEEEEEe------CCCCEEEEEEcccCCC---hhHHHHHHHHhhcC-CCCcceeeeeEEEe-CC
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVL------PSGQVVAIKHIYKSNN---TDSFSREVEGLSRV-RHPNLVCLFGCCVE-GG 133 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~---~~~~~~e~~~l~~l-~h~niv~~~~~~~~-~~ 133 (347)
.++|...+.||+|+||.||+|.. .+++.||+|.+..... ...+.+|+.++.++ +|||++++++++.. +.
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 35678889999999999999973 3577899999975432 24577899999999 68999999998765 45
Q ss_pred eEEEEEeecCCCChHHHhhcCC----------------------------------------------------------
Q 040826 134 EQYLVYEFCAAGNLAQHLLRKD---------------------------------------------------------- 155 (347)
Q Consensus 134 ~~~lv~e~~~~gsL~~~l~~~~---------------------------------------------------------- 155 (347)
..+++|||+++|+|.+++....
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 6789999999999999885421
Q ss_pred --------CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcc-ceeeccc
Q 040826 156 --------SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES-KVFTDVR 226 (347)
Q Consensus 156 --------~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~ 226 (347)
..+++..+..++.|++.||.||| +.+++||||||+||+++.++.++|+|||++........ .......
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 242 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR 242 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCC
Confidence 23677888999999999999999 88999999999999999999999999999876532211 1122234
Q ss_pred CCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHH
Q 040826 227 GTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRAD 305 (347)
Q Consensus 227 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 305 (347)
++..|+|||.+.+..++.++|+||||+++|+|++ |..|+........ ... ....+... ..+. . .
T Consensus 243 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-~~~---~~~~~~~~----~~~~---~----~ 307 (343)
T cd05103 243 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FCR---RLKEGTRM----RAPD---Y----T 307 (343)
T ss_pred CCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH-HHH---HHhccCCC----CCCC---C----C
Confidence 5678999999988889999999999999999997 8888754322111 111 11111110 0011 1 1
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 040826 306 FESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWKN 340 (347)
Q Consensus 306 ~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~~ 340 (347)
.+++.+++.+||+.+|.+|||+.+|++.|+.++++
T Consensus 308 ~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 308 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 24689999999999999999999999999999865
No 154
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=6.6e-42 Score=306.10 Aligned_cols=236 Identities=28% Similarity=0.348 Sum_probs=191.6
Q ss_pred CeeeecCCeeEEEEEe----CCCCEEEEEEcccCC----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecC
Q 040826 72 RFLGRGSAGLVYKGVL----PSGQVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCA 143 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 143 (347)
+.||+|+||.||++.. .+|+.+|+|.+.... ....+..|++++++++||||+++++++.+.+..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5699999999999874 367899999986532 23456789999999999999999999999999999999999
Q ss_pred CCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceee
Q 040826 144 AGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT 223 (347)
Q Consensus 144 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 223 (347)
+|+|.+++... ..+++..+..++.|++.||.||| +.+++||||||+||+++.++.++|+|||++...... .....
T Consensus 82 ~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~-~~~~~ 156 (318)
T cd05582 82 GGDLFTRLSKE-VMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH-EKKAY 156 (318)
T ss_pred CCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCC-CCcee
Confidence 99999988543 45899999999999999999999 889999999999999999999999999998765322 12233
Q ss_pred cccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCH
Q 040826 224 DVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINR 303 (347)
Q Consensus 224 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 303 (347)
...|+..|+|||.+.+..++.++||||||+++|+|++|+.||..... ...... +...... ++.
T Consensus 157 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~-~~~~~~----i~~~~~~------------~p~ 219 (318)
T cd05582 157 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR-KETMTM----ILKAKLG------------MPQ 219 (318)
T ss_pred cccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH-HHHHHH----HHcCCCC------------CCC
Confidence 45689999999999988899999999999999999999999974322 111111 1111111 111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHH
Q 040826 304 ADFESILKIAVLCVAKSSKGRPTIDV 329 (347)
Q Consensus 304 ~~~~~l~~l~~~cl~~~p~~Rps~~e 329 (347)
.....+.+|+.+||+.||.+|||+.+
T Consensus 220 ~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 220 FLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 22357889999999999999999655
No 155
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=4.4e-41 Score=300.66 Aligned_cols=239 Identities=24% Similarity=0.348 Sum_probs=192.6
Q ss_pred CeeeecCCeeEEEEEeC-CCCEEEEEEcccC-----CChhHHHHHHHHhhcC-CCCcceeeeeEEEeCCeEEEEEeecCC
Q 040826 72 RFLGRGSAGLVYKGVLP-SGQVVAIKHIYKS-----NNTDSFSREVEGLSRV-RHPNLVCLFGCCVEGGEQYLVYEFCAA 144 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-----~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 144 (347)
+.||+|+||.||++... +++.||+|.+... .....+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999965 5789999998753 2234567788888877 699999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeec
Q 040826 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD 224 (347)
Q Consensus 145 gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 224 (347)
|+|.+++... ..+++..+..++.|++.||.||| +.+++|+||||+||++++++.++|+|||++...... ......
T Consensus 81 ~~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~~ 155 (318)
T cd05570 81 GDLMFHIQRS-GRFDEPRARFYAAEIVLGLQFLH---ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILG-GVTTST 155 (318)
T ss_pred CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeEccCCCHHHeEECCCCcEEecccCCCeecCcC-CCcccc
Confidence 9999888654 35899999999999999999999 889999999999999999999999999998753211 122233
Q ss_pred ccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHH
Q 040826 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRA 304 (347)
Q Consensus 225 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 304 (347)
..|+..|+|||.+.+..++.++|+||||+++|+|++|+.||...... . ....+...... .+..
T Consensus 156 ~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~-~----~~~~i~~~~~~------------~~~~ 218 (318)
T cd05570 156 FCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED-E----LFQSILEDEVR------------YPRW 218 (318)
T ss_pred eecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH-H----HHHHHHcCCCC------------CCCc
Confidence 46899999999999999999999999999999999999999743321 1 11122111111 1112
Q ss_pred HHHHHHHHHHHhccCCCCCCCCH-----HHHHH
Q 040826 305 DFESILKIAVLCVAKSSKGRPTI-----DVVYE 332 (347)
Q Consensus 305 ~~~~l~~l~~~cl~~~p~~Rps~-----~ei~~ 332 (347)
....+.+++.+||+.||.+|||+ .++++
T Consensus 219 ~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 219 LSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred CCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 23578999999999999999999 77765
No 156
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=2.9e-41 Score=313.70 Aligned_cols=259 Identities=21% Similarity=0.234 Sum_probs=194.3
Q ss_pred hcCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCCChhHHHHHHHHhhcCCCCcceeeeeEEEeC--------CeE
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEG--------GEQ 135 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--------~~~ 135 (347)
..+|...+.||+|+||.||+|.. .+++.||+|++.... ....+|+.+++.++||||+++++++... ...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~--~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 142 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP--QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFL 142 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc--chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEE
Confidence 45788999999999999999995 478999999886543 3345799999999999999998876432 246
Q ss_pred EEEEeecCCCChHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCC-ceEEeecccc
Q 040826 136 YLVYEFCAAGNLAQHLLR---KDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKL-EPKLSDFGLA 211 (347)
Q Consensus 136 ~lv~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~-~~kl~dfg~~ 211 (347)
++||||+++ +|.+++.. ....+++..+..++.|++.||.||| +.+++||||||+|||++.++ .+||+|||++
T Consensus 143 ~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH---~~~IiHrDLKp~NILl~~~~~~vkL~DFGla 218 (440)
T PTZ00036 143 NVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIH---SKFICHRDLKPQNLLIDPNTHTLKLCDFGSA 218 (440)
T ss_pred EEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCcCHHHEEEcCCCCceeeeccccc
Confidence 789999986 78776642 4466899999999999999999999 88999999999999999665 6999999999
Q ss_pred eecCCCccceeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCC----
Q 040826 212 KMLGMEESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGK---- 286 (347)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~---- 286 (347)
+..... .......++..|+|||++.+ ..++.++|||||||++|+|++|.+||...... +.+....+......
T Consensus 219 ~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~-~~~~~i~~~~~~p~~~~~ 295 (440)
T PTZ00036 219 KNLLAG--QRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSV-DQLVRIIQVLGTPTEDQL 295 (440)
T ss_pred hhccCC--CCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCCHHHH
Confidence 865322 12233467899999998876 46899999999999999999999999754322 22222222211100
Q ss_pred ----CCcccc-----cCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 287 ----RPIKDF-----EDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 287 ----~~~~~~-----~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
...... ....+...++...+.++.+|+.+||+.||.+|||+.|+++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 296 KEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred HHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 000000 0011111122233468999999999999999999999984
No 157
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=9.5e-41 Score=289.92 Aligned_cols=245 Identities=27% Similarity=0.443 Sum_probs=200.8
Q ss_pred CeeeecCCeeEEEEEeCC----CCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCC
Q 040826 72 RFLGRGSAGLVYKGVLPS----GQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAA 144 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 144 (347)
+.||+|+||.||+|.... +..+++|.+..... ...+.+|+..++.++|+|++++++++.+....+++|||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 369999999999999653 78899999977544 45788999999999999999999999999999999999999
Q ss_pred CChHHHhhcC--------CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCC
Q 040826 145 GNLAQHLLRK--------DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM 216 (347)
Q Consensus 145 gsL~~~l~~~--------~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 216 (347)
++|.+++... ...+++..+..++.|++.|+.||| +++++|+||+|+||+++.++.++|+|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHH---cCCcccCccCcceEEECCCCcEEEccccccccccc
Confidence 9999999765 467999999999999999999999 89999999999999999999999999999987643
Q ss_pred Ccc-ceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccC
Q 040826 217 EES-KVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFED 294 (347)
Q Consensus 217 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (347)
... .......++..|+|||.+.+..++.++|+||||+++|+|++ |..||..... .+ .......+...
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-~~----~~~~~~~~~~~------ 226 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN-EE----VLEYLRKGYRL------ 226 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH-HH----HHHHHHcCCCC------
Confidence 221 22333457889999999988889999999999999999999 5888865421 11 11222111110
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 040826 295 PRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEID 335 (347)
Q Consensus 295 ~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~ 335 (347)
........++.+++.+||+.+|.+|||+.++++.|+
T Consensus 227 -----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 227 -----PKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred -----CCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 111122467999999999999999999999999874
No 158
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=4.4e-41 Score=299.64 Aligned_cols=261 Identities=23% Similarity=0.306 Sum_probs=199.5
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC---ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN---NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
++|...+.||+|+||.||+|... +++.+|+|.+.... ....+.+|+.++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 46777889999999999999954 67889999886432 234577899999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccce
Q 040826 142 CAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKV 221 (347)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 221 (347)
+++ +|.+++...+..+++..+..++.|++.||.||| +.|++||||||+||+++.++.++|+|||++....... ..
T Consensus 86 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~ 160 (309)
T cd07872 86 LDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPT-KT 160 (309)
T ss_pred CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECccccceecCCCc-cc
Confidence 986 898888766667899999999999999999999 8899999999999999999999999999987643221 12
Q ss_pred eecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCC-c---------c
Q 040826 222 FTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRP-I---------K 290 (347)
Q Consensus 222 ~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~---------~ 290 (347)
.....++..|+|||.+.+ ..++.++||||||+++|+|+||+.||...... +......+........ . .
T Consensus 161 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
T cd07872 161 YSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVE-DELHLIFRLLGTPTEETWPGISSNDEFK 239 (309)
T ss_pred cccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCCHHHHhhhcchhhhh
Confidence 233457889999998865 56889999999999999999999999754322 2222222111100000 0 0
Q ss_pred cccCCCCCC----CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 291 DFEDPRLNG----NINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 291 ~~~~~~l~~----~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
....+.... ........++.+|+.+||+.||.+|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 240 NYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 000000000 001123357889999999999999999999986
No 159
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=6.3e-41 Score=295.67 Aligned_cols=257 Identities=22% Similarity=0.286 Sum_probs=201.0
Q ss_pred HhcCcccCCeeeecCCeeEEEEEeC------CCCEEEEEEcccCCCh---hHHHHHHHHhhcCCCCcceeeeeEEEeCCe
Q 040826 64 AINNDWDRRFLGRGSAGLVYKGVLP------SGQVVAIKHIYKSNNT---DSFSREVEGLSRVRHPNLVCLFGCCVEGGE 134 (347)
Q Consensus 64 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~---~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 134 (347)
..++|...+.||+|+||.||+|... .+..||+|.+...... ..+.+|+..++.++|||++++++++.+...
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 3567888899999999999999743 2457999988654332 357789999999999999999999998889
Q ss_pred EEEEEeecCCCChHHHhhcC---------CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEE
Q 040826 135 QYLVYEFCAAGNLAQHLLRK---------DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205 (347)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~---------~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl 205 (347)
.+++|||+++|+|.+++... ....+...+..++.|++.||.||| +++++|+||||+||++++++.++|
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCCChheEEEcCCCcEEE
Confidence 99999999999999999642 134567788999999999999999 889999999999999999999999
Q ss_pred eecccceecCCCccc-eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhc
Q 040826 206 SDFGLAKMLGMEESK-VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVS 283 (347)
Q Consensus 206 ~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~ 283 (347)
+|||+++........ ......++..|+|||.+.+..++.++|+||||+++|+|++ |..||..... .+ ......
T Consensus 161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~-~~----~~~~~~ 235 (288)
T cd05061 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQ----VLKFVM 235 (288)
T ss_pred CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH-HH----HHHHHH
Confidence 999998765322211 1122335678999999998889999999999999999998 6777753221 11 111111
Q ss_pred CCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 040826 284 MGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWK 339 (347)
Q Consensus 284 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~ 339 (347)
.+... .........+.+++.+||+.+|.+|||+.++++.|++.+.
T Consensus 236 ~~~~~-----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~ 280 (288)
T cd05061 236 DGGYL-----------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH 280 (288)
T ss_pred cCCCC-----------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcC
Confidence 11110 0111223679999999999999999999999999998753
No 160
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=7e-41 Score=290.13 Aligned_cols=249 Identities=28% Similarity=0.378 Sum_probs=204.6
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCC
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAA 144 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 144 (347)
++|...+.||+|+||.||+|... ++..+++|.+......+.+.+|++.+++++|+|++++++.+.+....++++||+++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~ 82 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGA 82 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCC
Confidence 46777888999999999999965 47899999987665567899999999999999999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeec
Q 040826 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD 224 (347)
Q Consensus 145 gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 224 (347)
++|.+++......+++..+..++.|++.|+.||| +.+++|+||+|+||++++++.++|+|||++....... .....
T Consensus 83 ~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~-~~~~~ 158 (256)
T cd06612 83 GSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLH---SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM-AKRNT 158 (256)
T ss_pred CcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEECCCCcEEEcccccchhcccCc-ccccc
Confidence 9999999766677999999999999999999999 7899999999999999999999999999988754222 12233
Q ss_pred ccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHH
Q 040826 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRA 304 (347)
Q Consensus 225 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 304 (347)
..++..|+|||.+.+..++.++||||||+++|+|++|+.|+......... . ....... +.+ ..+..
T Consensus 159 ~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~-~----~~~~~~~-------~~~--~~~~~ 224 (256)
T cd06612 159 VIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAI-F----MIPNKPP-------PTL--SDPEK 224 (256)
T ss_pred ccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhh-h----hhccCCC-------CCC--Cchhh
Confidence 45788999999999889999999999999999999999998743222111 1 0100000 000 11122
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 305 DFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 305 ~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
...++.+++.+||+.||++|||+.+|++
T Consensus 225 ~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 225 WSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred cCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 3357999999999999999999999986
No 161
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.1e-40 Score=291.63 Aligned_cols=251 Identities=24% Similarity=0.375 Sum_probs=196.7
Q ss_pred cccCCeeeecCCeeEEEEEeC----CCCEEEEEEcccCCC----hhHHHHHHHHhhcCCCCcceeeeeEEEeCCe-----
Q 040826 68 DWDRRFLGRGSAGLVYKGVLP----SGQVVAIKHIYKSNN----TDSFSREVEGLSRVRHPNLVCLFGCCVEGGE----- 134 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~----- 134 (347)
|...+.||+|+||.||+|... .+..||+|.+..... ...+.+|+..++.++|||++++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 345678999999999999853 236799999875432 2467889999999999999999998866543
Q ss_pred -EEEEEeecCCCChHHHhhcC-----CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeec
Q 040826 135 -QYLVYEFCAAGNLAQHLLRK-----DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDF 208 (347)
Q Consensus 135 -~~lv~e~~~~gsL~~~l~~~-----~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~df 208 (347)
.++++||+++|+|.+++... ...+++.....++.|++.||.||| +.+++|+||||+||++++++.++|+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLS---NRNFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchheEEECCCCeEEECCc
Confidence 79999999999999988432 246899999999999999999999 789999999999999999999999999
Q ss_pred ccceecCCCccce-eecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCC
Q 040826 209 GLAKMLGMEESKV-FTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGK 286 (347)
Q Consensus 209 g~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 286 (347)
|+++......... ......+..|+|||.+.+..++.++||||||+++|+|++ |..||..... .+.. .....+.
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~-~~~~----~~~~~~~ 232 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN-HEIY----DYLRHGN 232 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH-HHHH----HHHHcCC
Confidence 9998754322211 122335678999999988889999999999999999999 7777754322 1111 1111111
Q ss_pred CCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 040826 287 RPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKA 337 (347)
Q Consensus 287 ~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~ 337 (347)
.. ..+.....++.+++.+||+.||.+|||+.++++.|+++
T Consensus 233 ~~-----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 233 RL-----------KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CC-----------CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 10 11112345799999999999999999999999999876
No 162
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.1e-40 Score=291.70 Aligned_cols=249 Identities=24% Similarity=0.376 Sum_probs=193.3
Q ss_pred cCCeeeecCCeeEEEEEeCC-CC--EEEEEEcccCC----ChhHHHHHHHHhhcCCCCcceeeeeEEEeC------CeEE
Q 040826 70 DRRFLGRGSAGLVYKGVLPS-GQ--VVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLVCLFGCCVEG------GEQY 136 (347)
Q Consensus 70 ~~~~lg~G~~g~V~~~~~~~-~~--~vavK~~~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~~~ 136 (347)
..+.||+|+||.||+|.+.+ +. .+|+|.+.... ....+.+|+.+++.++|+||+++++++... ...+
T Consensus 3 i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 82 (272)
T cd05075 3 LGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPV 82 (272)
T ss_pred cccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcE
Confidence 45779999999999999654 33 58999886532 234678899999999999999999987432 2468
Q ss_pred EEEeecCCCChHHHhhc-----CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccc
Q 040826 137 LVYEFCAAGNLAQHLLR-----KDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLA 211 (347)
Q Consensus 137 lv~e~~~~gsL~~~l~~-----~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~ 211 (347)
+++||+++|+|.+++.. ....+++.....++.|++.||.||| +++++|+||||+||++++++.++|+|||++
T Consensus 83 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 159 (272)
T cd05075 83 VILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLS---SKSFIHRDLAARNCMLNENMNVCVADFGLS 159 (272)
T ss_pred EEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhheEEcCCCCEEECCCCcc
Confidence 99999999999988742 2345889999999999999999999 789999999999999999999999999999
Q ss_pred eecCCCccce-eecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCc
Q 040826 212 KMLGMEESKV-FTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPI 289 (347)
Q Consensus 212 ~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (347)
.......... .....++..|++||...+..++.++|+||||+++|+|++ |..||..... .. .. .....+...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-~~-~~---~~~~~~~~~- 233 (272)
T cd05075 160 KKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN-SE-IY---DYLRQGNRL- 233 (272)
T ss_pred cccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH-HH-HH---HHHHcCCCC-
Confidence 8754322111 122345678999999999899999999999999999999 7778754221 11 11 111111110
Q ss_pred ccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 040826 290 KDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKA 337 (347)
Q Consensus 290 ~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~ 337 (347)
.........+.+++.+||+.+|++|||+.++++.|+++
T Consensus 234 ----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 234 ----------KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred ----------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 00112335689999999999999999999999999875
No 163
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=3.3e-41 Score=302.22 Aligned_cols=235 Identities=27% Similarity=0.291 Sum_probs=187.4
Q ss_pred CeeeecCCeeEEEEEeC-CCCEEEEEEcccCC-----ChhHHHHHHH-HhhcCCCCcceeeeeEEEeCCeEEEEEeecCC
Q 040826 72 RFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN-----NTDSFSREVE-GLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAA 144 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 144 (347)
+.||+|+||.||+|... +|+.||+|.+.... ....+..|.. +++.++||||+++++.+.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 36999999999999964 78999999986532 2233445544 56788999999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeec
Q 040826 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD 224 (347)
Q Consensus 145 gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 224 (347)
|+|.+++... ..+++..+..++.|++.||.||| +.|++||||||+|||++.++.+||+|||++..... .......
T Consensus 81 g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~-~~~~~~~ 155 (323)
T cd05575 81 GELFFHLQRE-RSFPEPRARFYAAEIASALGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIE-HSKTTST 155 (323)
T ss_pred CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeccCCCccccc-CCCcccc
Confidence 9999988654 45899999999999999999999 88999999999999999999999999999875321 1222334
Q ss_pred ccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHH
Q 040826 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRA 304 (347)
Q Consensus 225 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 304 (347)
..|+..|+|||.+.+..++.++||||||+++|+|++|..||...... .....+...... +...
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~-----~~~~~i~~~~~~--------~~~~---- 218 (323)
T cd05575 156 FCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTA-----EMYDNILNKPLR--------LKPN---- 218 (323)
T ss_pred ccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHH-----HHHHHHHcCCCC--------CCCC----
Confidence 56899999999999989999999999999999999999999743211 111222211111 1111
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHH
Q 040826 305 DFESILKIAVLCVAKSSKGRPTID 328 (347)
Q Consensus 305 ~~~~l~~l~~~cl~~~p~~Rps~~ 328 (347)
....+.+++.+||+.||.+||++.
T Consensus 219 ~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 219 ISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred CCHHHHHHHHHHhhcCHHhCCCCC
Confidence 235789999999999999999985
No 164
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=8.2e-41 Score=293.29 Aligned_cols=252 Identities=27% Similarity=0.369 Sum_probs=197.9
Q ss_pred hcCcccCCeeeecCCeeEEEEEeC------CCCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeE
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVLP------SGQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQ 135 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 135 (347)
.++|...+.||+|++|.||+|... ++..|++|.+..... ...+.+|+.++++++|+||+++++++.+....
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR 84 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence 356777889999999999999964 356789998865432 24688899999999999999999999988899
Q ss_pred EEEEeecCCCChHHHhhcCC------CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCC---ceEEe
Q 040826 136 YLVYEFCAAGNLAQHLLRKD------SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKL---EPKLS 206 (347)
Q Consensus 136 ~lv~e~~~~gsL~~~l~~~~------~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~---~~kl~ 206 (347)
+++|||+++++|.+++.... ..+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++ .++|+
T Consensus 85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE---ENHFIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchheEEEeccCCCcceEec
Confidence 99999999999999986532 35899999999999999999999 78999999999999998765 58999
Q ss_pred ecccceecCCCccce-eecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcC
Q 040826 207 DFGLAKMLGMEESKV-FTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSM 284 (347)
Q Consensus 207 dfg~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~ 284 (347)
|||++.......... ......+..|+|||.+.+..++.++||||||+++|+|++ |..||...... . .. ..+..
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~-~-~~---~~~~~ 236 (277)
T cd05036 162 DFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ-E-VM---EFVTG 236 (277)
T ss_pred cCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-H-HH---HHHHc
Confidence 999988653221111 112233568999999998899999999999999999997 88888643221 1 11 11111
Q ss_pred CCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 040826 285 GKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEID 335 (347)
Q Consensus 285 ~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~ 335 (347)
.... ..+...+..+.+++.+||+.+|++|||+.+|++.|+
T Consensus 237 ~~~~-----------~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 237 GGRL-----------DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred CCcC-----------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 1110 111122357899999999999999999999999886
No 165
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=8.4e-41 Score=292.13 Aligned_cols=245 Identities=25% Similarity=0.397 Sum_probs=192.7
Q ss_pred eeeecCCeeEEEEEeC-CCC--EEEEEEcccCC---ChhHHHHHHHHhhcC-CCCcceeeeeEEEeCCeEEEEEeecCCC
Q 040826 73 FLGRGSAGLVYKGVLP-SGQ--VVAIKHIYKSN---NTDSFSREVEGLSRV-RHPNLVCLFGCCVEGGEQYLVYEFCAAG 145 (347)
Q Consensus 73 ~lg~G~~g~V~~~~~~-~~~--~vavK~~~~~~---~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g 145 (347)
.||+|+||.||+|... +|. .+++|.+.... ....+.+|++++.++ +|||++++++++...+..+++|||+++|
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG 81 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCC
Confidence 5899999999999964 444 46888876432 234688899999999 7999999999999999999999999999
Q ss_pred ChHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeeccc
Q 040826 146 NLAQHLLRKD---------------SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGL 210 (347)
Q Consensus 146 sL~~~l~~~~---------------~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~ 210 (347)
+|.+++.... ..+++..+..++.|++.|++||| +.+++|+||||+||++++++.++++|||+
T Consensus 82 ~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nili~~~~~~kl~dfgl 158 (270)
T cd05047 82 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGL 158 (270)
T ss_pred cHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccccceEEEcCCCeEEECCCCC
Confidence 9999986432 24789999999999999999999 78999999999999999999999999999
Q ss_pred ceecCCCccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCc
Q 040826 211 AKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPI 289 (347)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (347)
+..... .........+..|+|||++.+..++.++|+||||+++|+|++ |..||..... .+ .......+...
T Consensus 159 ~~~~~~--~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~-~~----~~~~~~~~~~~- 230 (270)
T cd05047 159 SRGQEV--YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-AE----LYEKLPQGYRL- 230 (270)
T ss_pred ccccch--hhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH-HH----HHHHHhCCCCC-
Confidence 863211 111111234567999999988889999999999999999997 8888853221 11 11111111100
Q ss_pred ccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 040826 290 KDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAW 338 (347)
Q Consensus 290 ~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~ 338 (347)
........++.+++.+||+.+|.+|||+.+++..|+.++
T Consensus 231 ----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 231 ----------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred ----------CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 011122357899999999999999999999999999886
No 166
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=5.2e-41 Score=300.91 Aligned_cols=239 Identities=22% Similarity=0.284 Sum_probs=191.2
Q ss_pred CcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC-----ChhHHHHHHHHhhcC-CCCcceeeeeEEEeCCeEEEEE
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN-----NTDSFSREVEGLSRV-RHPNLVCLFGCCVEGGEQYLVY 139 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 139 (347)
+|...+.||+|+||.||+|... +++.+|+|.+.... .......|..++..+ +|++++.+++++.+.+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 3666788999999999999954 67899999987532 223456677777777 5899999999999999999999
Q ss_pred eecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcc
Q 040826 140 EFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES 219 (347)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 219 (347)
||+++|+|.+++... ..+++..+..++.|++.||.||| +.+++||||||+|||+++++.+||+|||++...... .
T Consensus 81 E~~~~g~L~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~-~ 155 (323)
T cd05616 81 EYVNGGDLMYQIQQV-GRFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD-G 155 (323)
T ss_pred cCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCEEecCCCHHHeEECCCCcEEEccCCCceecCCC-C
Confidence 999999999988654 45899999999999999999999 889999999999999999999999999998754321 2
Q ss_pred ceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCC
Q 040826 220 KVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNG 299 (347)
Q Consensus 220 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 299 (347)
.......|++.|+|||.+.+..++.++|+|||||++|+|++|+.||...... .. ...+......
T Consensus 156 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~-~~----~~~i~~~~~~----------- 219 (323)
T cd05616 156 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-EL----FQSIMEHNVA----------- 219 (323)
T ss_pred CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH-HH----HHHHHhCCCC-----------
Confidence 2233456899999999999999999999999999999999999999754321 11 1112111111
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCH
Q 040826 300 NINRADFESILKIAVLCVAKSSKGRPTI 327 (347)
Q Consensus 300 ~~~~~~~~~l~~l~~~cl~~~p~~Rps~ 327 (347)
++.....++.+++.+||+.+|.+|++.
T Consensus 220 -~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 220 -YPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred -CCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 111223578999999999999999985
No 167
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=7.6e-41 Score=295.17 Aligned_cols=253 Identities=25% Similarity=0.396 Sum_probs=200.2
Q ss_pred hcCcccCCeeeecCCeeEEEEEeC------CCCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeE
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVLP------SGQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQ 135 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 135 (347)
.++|...+.||+|+||.||++... ++..+++|.+..... ...+.+|+.++++++|||++++++++.++...
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 356778889999999999999853 467899998875433 34688899999999999999999999998899
Q ss_pred EEEEeecCCCChHHHhhcCC---------------------CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCC
Q 040826 136 YLVYEFCAAGNLAQHLLRKD---------------------SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTN 194 (347)
Q Consensus 136 ~lv~e~~~~gsL~~~l~~~~---------------------~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~N 194 (347)
++++||+++++|.+++.... ..+++..++.++.|++.||.||| +++++|+||+|+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH---~~~i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLS---ERKFVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCeecccccHhh
Confidence 99999999999999985321 24778889999999999999999 7899999999999
Q ss_pred EEecCCCceEEeecccceecCCCcc-ceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhh
Q 040826 195 ILLTEKLEPKLSDFGLAKMLGMEES-KVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDAR 272 (347)
Q Consensus 195 ili~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~ 272 (347)
|++++++.++|+|||.+........ ........+..|+|||.+.+..++.++||||||+++|+|++ |..||..... .
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~-~ 239 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH-E 239 (288)
T ss_pred eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH-H
Confidence 9999999999999999876532221 11222234667999999998889999999999999999998 7777753221 1
Q ss_pred hHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 040826 273 DQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDK 336 (347)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~ 336 (347)
+ ....+..+... ........++.+++.+||+.+|.+|||+.|+++.|++
T Consensus 240 ~----~~~~~~~~~~~-----------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 240 E----VIYYVRDGNVL-----------SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred H----HHHHHhcCCCC-----------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 1 11222111110 0111233679999999999999999999999999873
No 168
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=9.2e-41 Score=291.36 Aligned_cols=252 Identities=26% Similarity=0.355 Sum_probs=198.4
Q ss_pred cCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC--ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeec
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN--NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFC 142 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 142 (347)
.+|...+.||+|+||.||+|.. .+|+.+++|++.... ....+.+|+..+++++|||++++++.+...+..++|+||+
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~ 88 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC 88 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence 4677889999999999999995 578899999886543 3346778999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcccee
Q 040826 143 AAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVF 222 (347)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 222 (347)
++++|.+++... ..+++..+..++.|++.|+.||| +.+++|+||+|+||++++++.++|+|||++...... ....
T Consensus 89 ~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~-~~~~ 163 (267)
T cd06646 89 GGGSLQDIYHVT-GPLSELQIAYVCRETLQGLAYLH---SKGKMHRDIKGANILLTDNGDVKLADFGVAAKITAT-IAKR 163 (267)
T ss_pred CCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEECcCccceeeccc-cccc
Confidence 999999988654 45899999999999999999999 789999999999999999999999999999865322 1122
Q ss_pred ecccCCCCcccccccc---CCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCC
Q 040826 223 TDVRGTIGYMDPEYMT---NAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNG 299 (347)
Q Consensus 223 ~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 299 (347)
....++..|+|||.+. ...++.++|+||||+++|+|++|+.|+........ .. ...... +..+....
T Consensus 164 ~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~-~~----~~~~~~-----~~~~~~~~ 233 (267)
T cd06646 164 KSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA-LF----LMSKSN-----FQPPKLKD 233 (267)
T ss_pred CccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhh-he----eeecCC-----CCCCCCcc
Confidence 3346788999999874 34577899999999999999999998853321111 00 000000 00111110
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 040826 300 NINRADFESILKIAVLCVAKSSKGRPTIDVVYEEI 334 (347)
Q Consensus 300 ~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l 334 (347)
......++.+++.+||+.+|++|||+++|++.+
T Consensus 234 --~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 234 --KTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred --ccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 112335799999999999999999999998753
No 169
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.9e-41 Score=310.10 Aligned_cols=249 Identities=21% Similarity=0.282 Sum_probs=194.6
Q ss_pred CcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccC-----CChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEe
Q 040826 67 NDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKS-----NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYE 140 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 140 (347)
+|...+.||+|+||.||++.. .+|+.||+|.+... .....+.+|+.++++++|+||+++++.+.+++..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 577888999999999999995 46899999998643 223467789999999999999999999999999999999
Q ss_pred ecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCc--
Q 040826 141 FCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE-- 218 (347)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~-- 218 (347)
|+++|+|.+++... ..+++..+..++.|++.||.||| +.+++||||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~ 157 (376)
T cd05598 82 YIPGGDMMSLLIRL-GIFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157 (376)
T ss_pred CCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccc
Confidence 99999999998654 45888999999999999999999 8899999999999999999999999999875321000
Q ss_pred ----------------------------------------cceeecccCCCCccccccccCCccCCcccHHHHHHHHHHH
Q 040826 219 ----------------------------------------SKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQL 258 (347)
Q Consensus 219 ----------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l 258 (347)
........||..|+|||++.+..++.++|||||||++|+|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyel 237 (376)
T cd05598 158 KYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 237 (376)
T ss_pred cccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeeh
Confidence 0001124689999999999999999999999999999999
Q ss_pred HhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCC---CHHHHHHH
Q 040826 259 LSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRP---TIDVVYEE 333 (347)
Q Consensus 259 ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rp---s~~ei~~~ 333 (347)
++|+.||.......... . +....... ..+. ...+ ..++.+++.+|+ .+|.+|+ |+.++++.
T Consensus 238 l~G~~Pf~~~~~~~~~~-~----i~~~~~~~---~~~~-~~~~----s~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 238 LVGQPPFLADTPAETQL-K----VINWETTL---HIPS-QAKL----SREASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred hhCCCCCCCCCHHHHHH-H----HhccCccc---cCCC-CCCC----CHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 99999997544322111 1 11110000 0000 1122 345777777776 5999999 88888754
No 170
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1.1e-40 Score=293.40 Aligned_cols=257 Identities=25% Similarity=0.344 Sum_probs=203.8
Q ss_pred CcccCCeeeecCCeeEEEEEeC-----CCCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEe--CCeEE
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP-----SGQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVE--GGEQY 136 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~ 136 (347)
.|...+.||+|+||.||++.+. ++..+|+|.+..... ...+.+|++.++.++|+|++++++++.. ....+
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR 84 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence 4555678999999999999853 367899999976554 4578999999999999999999999877 55789
Q ss_pred EEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCC
Q 040826 137 LVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM 216 (347)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 216 (347)
++|||+++++|.+++......+++..+..++.|++.||+||| +.+++|+||+|+||+++.++.++|+|||.+.....
T Consensus 85 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 161 (284)
T cd05038 85 LIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLG---SQRYIHRDLAARNILVESEDLVKISDFGLAKVLPE 161 (284)
T ss_pred EEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEccccccccccc
Confidence 999999999999999776667999999999999999999999 78999999999999999999999999999987642
Q ss_pred Cccce--eecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhh----------HHHHHHhhhcC
Q 040826 217 EESKV--FTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARD----------QLTRKARDVSM 284 (347)
Q Consensus 217 ~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~----------~~~~~~~~~~~ 284 (347)
..... .....++..|+|||...+..++.++|+||||+++++|++|..|+........ ...........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (284)
T cd05038 162 DKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKE 241 (284)
T ss_pred CCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHc
Confidence 21111 1123345679999999888899999999999999999999998764322110 01111111111
Q ss_pred CCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 040826 285 GKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKA 337 (347)
Q Consensus 285 ~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~ 337 (347)
... ......+..++.+++.+||+.+|.+|||+.||++.|+++
T Consensus 242 ~~~-----------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 242 GER-----------LPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred CCc-----------CCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 110 011122346799999999999999999999999999876
No 171
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-40 Score=298.39 Aligned_cols=250 Identities=30% Similarity=0.373 Sum_probs=211.5
Q ss_pred HhcCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC-----hhHHHHHHHHhhcCC-CCcceeeeeEEEeCCeEE
Q 040826 64 AINNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN-----TDSFSREVEGLSRVR-HPNLVCLFGCCVEGGEQY 136 (347)
Q Consensus 64 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~ 136 (347)
....|...+.||+|.||.||++..+ +|+.+|+|.+.+... .....+|+.+|+++. ||||+.+.+.+++....+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 3456777789999999999999965 599999999976532 357899999999998 999999999999999999
Q ss_pred EEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCC----CceEEeecccce
Q 040826 137 LVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEK----LEPKLSDFGLAK 212 (347)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~----~~~kl~dfg~~~ 212 (347)
+|||++.||.|.+.+... .+++..+..++.|+++++.||| +.|++||||||+|+|+... +.++++|||++.
T Consensus 113 lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH---~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~ 187 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLH---SLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAK 187 (382)
T ss_pred EEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHH---hCCceeccCCHHHeeeccccCCCCcEEEeeCCCce
Confidence 999999999999999766 3999999999999999999999 8999999999999999643 479999999999
Q ss_pred ecCCCccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccc
Q 040826 213 MLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDF 292 (347)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (347)
.... .......+||+.|+|||++...+|+..+|+||+|+++|.|++|.+||.......... .+..+.. .+
T Consensus 188 ~~~~--~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~-----~i~~~~~---~f 257 (382)
T KOG0032|consen 188 FIKP--GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL-----AILRGDF---DF 257 (382)
T ss_pred EccC--CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH-----HHHcCCC---CC
Confidence 8764 455677899999999999999999999999999999999999999998654333322 3333322 22
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 293 EDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 293 ~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
.++.+. ...+.+.+++..++..||.+|+|+.+++++
T Consensus 258 ~~~~w~-----~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 258 TSEPWD-----DISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred CCCCcc-----ccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 222222 234579999999999999999999999984
No 172
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=9.4e-41 Score=292.83 Aligned_cols=251 Identities=23% Similarity=0.338 Sum_probs=199.5
Q ss_pred cCcccCCeeeecCCeeEEEEEeC------CCCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP------SGQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQY 136 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 136 (347)
++|...+.||+|+||.||+|... ++..+++|.+..... ...+.+|+.+++.++|||++++++++......+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~ 85 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL 85 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE
Confidence 46777889999999999999853 236899999865543 236788999999999999999999999999999
Q ss_pred EEEeecCCCChHHHhhcC---------CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEee
Q 040826 137 LVYEFCAAGNLAQHLLRK---------DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSD 207 (347)
Q Consensus 137 lv~e~~~~gsL~~~l~~~---------~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~d 207 (347)
++|||+++++|.+++... ...+++..++.++.|++.||.||| +.+++|+||+|+||+++.++.++|+|
T Consensus 86 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~di~p~nill~~~~~~kl~d 162 (277)
T cd05032 86 VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLA---AKKFVHRDLAARNCMVAEDLTVKIGD 162 (277)
T ss_pred EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccChheEEEcCCCCEEECC
Confidence 999999999999998542 234788899999999999999999 88999999999999999999999999
Q ss_pred cccceecCCCcc-ceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCC
Q 040826 208 FGLAKMLGMEES-KVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMG 285 (347)
Q Consensus 208 fg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~ 285 (347)
||+++....... .......++..|+|||.+.+..++.++|+||||+++|++++ |..||...... ... +....+
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~--~~~---~~~~~~ 237 (277)
T cd05032 163 FGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE--EVL---KFVIDG 237 (277)
T ss_pred cccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH--HHH---HHHhcC
Confidence 999876532221 11223346788999999988889999999999999999998 88887532211 111 111111
Q ss_pred CCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 040826 286 KRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEID 335 (347)
Q Consensus 286 ~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~ 335 (347)
... ..+......+.+++.+||+.+|++|||+.++++.|+
T Consensus 238 ~~~-----------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 238 GHL-----------DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred CCC-----------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 110 011112467999999999999999999999999886
No 173
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=3.5e-41 Score=308.90 Aligned_cols=248 Identities=20% Similarity=0.277 Sum_probs=192.1
Q ss_pred CcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC-----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEe
Q 040826 67 NDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN-----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYE 140 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 140 (347)
.|...+.||+|+||.||+|.. .+++.+|+|.+.... ....+.+|+.+++.++||||+++++.+.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 467788999999999999995 468899999986532 23467889999999999999999999999999999999
Q ss_pred ecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCc--
Q 040826 141 FCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE-- 218 (347)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~-- 218 (347)
|+++|+|.+++.+. ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++.++|+|||++.......
T Consensus 82 ~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~al~~lH---~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~ 157 (382)
T cd05625 82 YIPGGDMMSLLIRM-GIFPEDLARFYIAELTCAVESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157 (382)
T ss_pred CCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccc
Confidence 99999999988654 45889999999999999999999 8899999999999999999999999999975321000
Q ss_pred --------------------------------------------cceeecccCCCCccccccccCCccCCcccHHHHHHH
Q 040826 219 --------------------------------------------SKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIV 254 (347)
Q Consensus 219 --------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i 254 (347)
........||..|+|||++.+..++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvi 237 (382)
T cd05625 158 KYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 237 (382)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHH
Confidence 000112468999999999999899999999999999
Q ss_pred HHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCC---HHHHH
Q 040826 255 ALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPT---IDVVY 331 (347)
Q Consensus 255 l~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps---~~ei~ 331 (347)
+|+|++|+.||.......... .... ...... .|. ...+ .++..+++.+++ .+|.+|++ +.+++
T Consensus 238 l~elltG~~Pf~~~~~~~~~~-~i~~----~~~~~~---~p~-~~~~----s~~~~~li~~l~-~~p~~R~~~~~~~ei~ 303 (382)
T cd05625 238 LYEMLVGQPPFLAQTPLETQM-KVIN----WQTSLH---IPP-QAKL----SPEASDLIIKLC-RGPEDRLGKNGADEIK 303 (382)
T ss_pred HHHHHhCCCCCCCCCHHHHHH-HHHc----cCCCcC---CCC-cccC----CHHHHHHHHHHc-cCHhHcCCCCCHHHHh
Confidence 999999999997543322111 1111 000000 000 0112 245677777665 59999987 77776
Q ss_pred H
Q 040826 332 E 332 (347)
Q Consensus 332 ~ 332 (347)
+
T Consensus 304 ~ 304 (382)
T cd05625 304 A 304 (382)
T ss_pred c
Confidence 4
No 174
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=2.4e-40 Score=290.63 Aligned_cols=257 Identities=25% Similarity=0.374 Sum_probs=204.6
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCC----EEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQ----VVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYL 137 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 137 (347)
.+|...+.||+|+||.||+|... +|. .+++|....... ...+.+|+..+++++|||++++++++.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 45667788999999999999854 343 589998876543 2467889999999999999999999887 78899
Q ss_pred EEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCC
Q 040826 138 VYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217 (347)
Q Consensus 138 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 217 (347)
++||+++|+|.+++.+....+++..+..++.|++.|+.||| +.+++|+||+|+||++++++.++|+|||.+......
T Consensus 86 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~ 162 (279)
T cd05057 86 ITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLE---EKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVD 162 (279)
T ss_pred EEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCEEecccCcceEEEcCCCeEEECCCcccccccCc
Confidence 99999999999999876667999999999999999999999 789999999999999999999999999999875422
Q ss_pred ccce-eecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCC
Q 040826 218 ESKV-FTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDP 295 (347)
Q Consensus 218 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (347)
.... .....++..|+|||.+.+..++.++|+||||+++|++++ |+.||...... ... ..+..+...
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~---~~~~~~~~~------- 230 (279)
T cd05057 163 EKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV--EIP---DLLEKGERL------- 230 (279)
T ss_pred ccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH--HHH---HHHhCCCCC-------
Confidence 2111 112224568999999988889999999999999999998 99998643221 111 111111110
Q ss_pred CCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhh
Q 040826 296 RLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWKNTM 342 (347)
Q Consensus 296 ~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~~~~ 342 (347)
..+..+...+.+++.+||..+|.+|||+.++++.|+++.++..
T Consensus 231 ----~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~~ 273 (279)
T cd05057 231 ----PQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDPQ 273 (279)
T ss_pred ----CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCCc
Confidence 0011122468899999999999999999999999999977653
No 175
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=9.2e-41 Score=289.23 Aligned_cols=246 Identities=26% Similarity=0.414 Sum_probs=199.0
Q ss_pred cCcccCCeeeecCCeeEEEEEeCCCCEEEEEEcccCCChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCCC
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 145 (347)
.+|...+.||+|+||.||++.. +++.+++|.+........+.+|+.++++++|||++++++++..+ ..+++|||++++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~~~ 83 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMSKG 83 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcchHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCCCC
Confidence 4567788999999999999975 67889999987766667889999999999999999999998654 579999999999
Q ss_pred ChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeec
Q 040826 146 NLAQHLLRKD-SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD 224 (347)
Q Consensus 146 sL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 224 (347)
+|.+++.... ..+++..++.++.|++.|+.||| +.|++||||+|+||+++.++.++|+|||.+...... ...
T Consensus 84 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~----~~~ 156 (254)
T cd05083 84 NLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG----VDN 156 (254)
T ss_pred CHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCcEEECCCccceecccc----CCC
Confidence 9999996543 45889999999999999999999 889999999999999999999999999998764321 112
Q ss_pred ccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCH
Q 040826 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINR 303 (347)
Q Consensus 225 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 303 (347)
...+..|+|||.+.+..++.++|+||||+++|+|++ |..||...... .. ......+... ....
T Consensus 157 ~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-~~----~~~~~~~~~~-----------~~~~ 220 (254)
T cd05083 157 SKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK-EV----KECVEKGYRM-----------EPPE 220 (254)
T ss_pred CCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH-HH----HHHHhCCCCC-----------CCCC
Confidence 234568999999988889999999999999999998 88888643221 11 1111111100 0111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 040826 304 ADFESILKIAVLCVAKSSKGRPTIDVVYEEIDK 336 (347)
Q Consensus 304 ~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~ 336 (347)
..++.+.+++.+||+.+|++|||+.++++.|++
T Consensus 221 ~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 221 GCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 233678999999999999999999999998864
No 176
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=2.4e-40 Score=286.05 Aligned_cols=245 Identities=29% Similarity=0.437 Sum_probs=197.1
Q ss_pred CeeeecCCeeEEEEEeCCCCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCCCChH
Q 040826 72 RFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLA 148 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 148 (347)
++||+|++|.||++...+++.|++|.+..... ...+.+|++++++++|+||+++++++.+....++++||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 36999999999999976799999998876433 346889999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcccee-ecccC
Q 040826 149 QHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVF-TDVRG 227 (347)
Q Consensus 149 ~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~-~~~~~ 227 (347)
+++......+++.....++.|+++++.||| +++++|+||+|+||+++.++.++|+|||.+........... .....
T Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ 157 (251)
T cd05041 81 TFLRKKKNRLTVKKLLQMSLDAAAGMEYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQI 157 (251)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcc
Confidence 999766667899999999999999999999 88999999999999999999999999999876532111111 11223
Q ss_pred CCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHH
Q 040826 228 TIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADF 306 (347)
Q Consensus 228 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 306 (347)
+..|+|||.+.+..++.++|+||||+++|+|++ |..||...... ..... ...+... ..+...+
T Consensus 158 ~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~-~~~~~----~~~~~~~-----------~~~~~~~ 221 (251)
T cd05041 158 PIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ-QTRER----IESGYRM-----------PAPQLCP 221 (251)
T ss_pred eeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH-HHHHH----HhcCCCC-----------CCCccCC
Confidence 567999999988889999999999999999999 77777543221 11111 1111000 1111234
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 040826 307 ESILKIAVLCVAKSSKGRPTIDVVYEEID 335 (347)
Q Consensus 307 ~~l~~l~~~cl~~~p~~Rps~~ei~~~l~ 335 (347)
.++.+++.+||+.+|.+|||+.|+++.|+
T Consensus 222 ~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 222 EEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 57999999999999999999999999886
No 177
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=8.1e-41 Score=304.63 Aligned_cols=253 Identities=21% Similarity=0.250 Sum_probs=198.2
Q ss_pred HHhcCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccC-----CChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEE
Q 040826 63 NAINNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKS-----NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQY 136 (347)
Q Consensus 63 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 136 (347)
...++|...+.||+|+||.||++... +++.+|+|.+... .....+.+|..+++.++||||+++++.+.+++..+
T Consensus 40 ~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~ 119 (371)
T cd05622 40 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLY 119 (371)
T ss_pred cchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEE
Confidence 34678999999999999999999955 6889999988642 12345778999999999999999999999999999
Q ss_pred EEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCC
Q 040826 137 LVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM 216 (347)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 216 (347)
+||||+++|+|.+++... .+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||++.....
T Consensus 120 lv~Ey~~gg~L~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~ 194 (371)
T cd05622 120 MVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK 194 (371)
T ss_pred EEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCc
Confidence 999999999999988543 4788899999999999999999 88999999999999999999999999999987643
Q ss_pred CccceeecccCCCCccccccccCC----ccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccc
Q 040826 217 EESKVFTDVRGTIGYMDPEYMTNA----KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDF 292 (347)
Q Consensus 217 ~~~~~~~~~~~~~~y~aPE~~~~~----~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (347)
..........||+.|+|||++.+. .++.++|||||||++|+|++|..||...... . ....+........ +
T Consensus 195 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~-~----~~~~i~~~~~~~~-~ 268 (371)
T cd05622 195 EGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-G----TYSKIMNHKNSLT-F 268 (371)
T ss_pred CCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHH-H----HHHHHHcCCCccc-C
Confidence 322223345699999999998753 3788999999999999999999999754321 1 1122211111000 0
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHhccCCCCC--CCCHHHHHHH
Q 040826 293 EDPRLNGNINRADFESILKIAVLCVAKSSKG--RPTIDVVYEE 333 (347)
Q Consensus 293 ~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~--Rps~~ei~~~ 333 (347)
+ .......++.+++.+|+..++.+ ||++.+|++.
T Consensus 269 --~-----~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 269 --P-----DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred --C-----CcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 0 01123357889999999844433 7899888875
No 178
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.1e-40 Score=291.63 Aligned_cols=250 Identities=27% Similarity=0.388 Sum_probs=196.4
Q ss_pred HhcCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccC-CChhHHHHHHHHhhcC-CCCcceeeeeEEEeC------Ce
Q 040826 64 AINNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKS-NNTDSFSREVEGLSRV-RHPNLVCLFGCCVEG------GE 134 (347)
Q Consensus 64 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~------~~ 134 (347)
+.+.|...+.||+|+||.||+|... +++.+|+|.+... .....+.+|+..++++ +|+|++++++++... ..
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~ 83 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ 83 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcE
Confidence 3456777788999999999999954 6889999988654 3345688999999998 699999999998753 46
Q ss_pred EEEEEeecCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeeccccee
Q 040826 135 QYLVYEFCAAGNLAQHLLRK-DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKM 213 (347)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~ 213 (347)
.+++|||+++++|.+++... ...+++..+..++.|++.|+.||| +.+++|+||+|+||++++++.++|+|||++..
T Consensus 84 ~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH---~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~ 160 (272)
T cd06637 84 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 160 (272)
T ss_pred EEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHEEECCCCCEEEccCCCcee
Confidence 89999999999999998753 456899999999999999999999 78999999999999999999999999999886
Q ss_pred cCCCccceeecccCCCCcccccccc-----CCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCC
Q 040826 214 LGMEESKVFTDVRGTIGYMDPEYMT-----NAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRP 288 (347)
Q Consensus 214 ~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 288 (347)
.... ........|+..|+|||++. +..++.++|+||||+++|+|++|+.||........... . .....
T Consensus 161 ~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~-~---~~~~~-- 233 (272)
T cd06637 161 LDRT-VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFL-I---PRNPA-- 233 (272)
T ss_pred cccc-cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHH-H---hcCCC--
Confidence 5321 12223356888999999886 34578899999999999999999999864322211111 1 00000
Q ss_pred cccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 289 IKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 289 ~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
... .......++.+|+.+||+.+|.+|||+.++++
T Consensus 234 -~~~--------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 234 -PRL--------KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred -CCC--------CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 000 01122357899999999999999999999976
No 179
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=2.2e-40 Score=287.08 Aligned_cols=247 Identities=26% Similarity=0.369 Sum_probs=202.0
Q ss_pred CcccCCeeeecCCeeEEEEE-eCCCCEEEEEEcccCC----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 67 NDWDRRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
+|...+.||.|+||.||.+. ..+++.+++|.+.... ....+.+|++++++++|+||+++++++.+.+..+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 46778899999999999998 4468899999876432 234688999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccc
Q 040826 142 CAAGNLAQHLLRK-DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220 (347)
Q Consensus 142 ~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 220 (347)
+++++|.+++... ...+++..+..++.|++.++.||| +.+++|+||+|+||++++++.++|+|||.+........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~- 156 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIH---KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS- 156 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChHhEEEeCCCCEEECcCcceEEcccccc-
Confidence 9999999999764 456899999999999999999999 78999999999999999999999999999887643221
Q ss_pred eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCC
Q 040826 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGN 300 (347)
Q Consensus 221 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 300 (347)
......++..|+|||...+..++.++|+||||+++|+|++|..||...... .....+..+..+.
T Consensus 157 ~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~-----~~~~~~~~~~~~~----------- 220 (256)
T cd08221 157 MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPL-----NLVVKIVQGNYTP----------- 220 (256)
T ss_pred cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHH-----HHHHHHHcCCCCC-----------
Confidence 223456889999999998888899999999999999999999998643221 1112222222110
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 301 INRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 301 ~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
.......++.+++.+||+.+|.+|||+.++++.
T Consensus 221 ~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 221 VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred CccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 112233579999999999999999999999875
No 180
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.7e-40 Score=296.43 Aligned_cols=256 Identities=24% Similarity=0.365 Sum_probs=200.5
Q ss_pred cCcccCCeeeecCCeeEEEEEeC--------CCCEEEEEEcccCCC---hhHHHHHHHHhhcC-CCCcceeeeeEEEeCC
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP--------SGQVVAIKHIYKSNN---TDSFSREVEGLSRV-RHPNLVCLFGCCVEGG 133 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~---~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 133 (347)
++|...+.||+|+||.||++... .+..+|+|.+..... ...+.+|+.+++++ +||||+++++++...+
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 46667889999999999999731 245789998875433 23577899999999 5999999999999888
Q ss_pred eEEEEEeecCCCChHHHhhcC---------------CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEec
Q 040826 134 EQYLVYEFCAAGNLAQHLLRK---------------DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLT 198 (347)
Q Consensus 134 ~~~lv~e~~~~gsL~~~l~~~---------------~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~ 198 (347)
..++++||+++|+|.+++... ...+++..+..++.|++.||.||| +.|++|+||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nill~ 168 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLE---SRRCIHRDLAARNVLVT 168 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeeccccceeEEEc
Confidence 999999999999999998542 235888999999999999999999 88999999999999999
Q ss_pred CCCceEEeecccceecCCCccce-eecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHH
Q 040826 199 EKLEPKLSDFGLAKMLGMEESKV-FTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLT 276 (347)
Q Consensus 199 ~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~ 276 (347)
+++.++|+|||.++......... .....++..|+|||.+.+..++.++|+||||+++|+|++ |..||.... ..+...
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~-~~~~~~ 247 (314)
T cd05099 169 EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIP-VEELFK 247 (314)
T ss_pred CCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCC-HHHHHH
Confidence 99999999999998653221111 112234467999999998889999999999999999999 777775321 111111
Q ss_pred HHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 040826 277 RKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWKN 340 (347)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~~ 340 (347)
....+... .....+..++.+++.+||+.+|++|||+.++++.|+++...
T Consensus 248 ----~~~~~~~~-----------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 296 (314)
T cd05099 248 ----LLREGHRM-----------DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAA 296 (314)
T ss_pred ----HHHcCCCC-----------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHH
Confidence 11111100 11112335788999999999999999999999999998653
No 181
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=2.6e-40 Score=292.73 Aligned_cols=258 Identities=22% Similarity=0.336 Sum_probs=196.7
Q ss_pred cCcccCCeeeecCCeeEEEEEeCC---------------CCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeee
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLPS---------------GQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFG 127 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~~---------------~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~ 127 (347)
++|...+.||+|+||.||++.... ...||+|.+..... ...+.+|++++++++|+|++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 467788899999999999987532 23589999876432 246889999999999999999999
Q ss_pred EEEeCCeEEEEEeecCCCChHHHhhcCC-----------CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEE
Q 040826 128 CCVEGGEQYLVYEFCAAGNLAQHLLRKD-----------SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNIL 196 (347)
Q Consensus 128 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~-----------~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nil 196 (347)
++...+..++||||+++++|.+++.... ..+++..++.++.|++.|+.||| +.+++|+||||+||+
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nil 161 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA---SLNFVHRDLATRNCL 161 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHH---hcCeeccccChhhEE
Confidence 9999999999999999999999885422 23688899999999999999999 889999999999999
Q ss_pred ecCCCceEEeecccceecCCCccc-eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh--CCCCcCCChhhhh
Q 040826 197 LTEKLEPKLSDFGLAKMLGMEESK-VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS--GQKVIELDFDARD 273 (347)
Q Consensus 197 i~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt--g~~p~~~~~~~~~ 273 (347)
+++++.++|+|||++......... ......++..|+|||...+..++.++|+||||+++++|++ +..||..... .+
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~-~~ 240 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSD-EQ 240 (295)
T ss_pred EcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccCh-HH
Confidence 999999999999998765322211 1222345778999999988889999999999999999998 4455543221 11
Q ss_pred HHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 040826 274 QLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEID 335 (347)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~ 335 (347)
.................. ......+..+.+++.+||+.||++|||+.+|++.|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 241 VIENTGEFFRNQGRQIYL--------SQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHHHHHHhhhhccccccC--------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 111111111100000000 001112357999999999999999999999999886
No 182
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=2.4e-40 Score=291.50 Aligned_cols=248 Identities=24% Similarity=0.269 Sum_probs=198.0
Q ss_pred cccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC-----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 68 DWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN-----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
|...+.||+|+||.||++.. .+|+.+|+|.+.... ....+.+|++++++++|+|++.+.+.+..++..++++||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 45567899999999999995 478899999886532 123467899999999999999999999999999999999
Q ss_pred cCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccc
Q 040826 142 CAAGNLAQHLLRK-DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220 (347)
Q Consensus 142 ~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 220 (347)
+++++|.+++... ...+++..+..++.|++.||.||| +.+++||||+|+||++++++.++|+|||++...... .
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH---~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~--~ 156 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLH---RENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG--E 156 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEECCCCCEEEecCCcceecCCC--C
Confidence 9999999888653 346999999999999999999999 889999999999999999999999999998764322 1
Q ss_pred eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCC
Q 040826 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGN 300 (347)
Q Consensus 221 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 300 (347)
......|+..|+|||.+.+..++.++|+||||+++|+|++|..||....... .............. .
T Consensus 157 ~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~-~~~~~~~~~~~~~~------------~ 223 (285)
T cd05632 157 SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV-KREEVDRRVLETEE------------V 223 (285)
T ss_pred cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhhhcccc------------c
Confidence 2233468999999999998889999999999999999999999997543221 11222222211111 1
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHHH
Q 040826 301 INRADFESILKIAVLCVAKSSKGRPT-----IDVVYEE 333 (347)
Q Consensus 301 ~~~~~~~~l~~l~~~cl~~~p~~Rps-----~~ei~~~ 333 (347)
+......++.+|+..||+.||.+||| +.++++.
T Consensus 224 ~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 224 YSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred cCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 11223356899999999999999999 6666653
No 183
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.4e-40 Score=298.93 Aligned_cols=253 Identities=23% Similarity=0.267 Sum_probs=195.5
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccC-----CChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKS-----NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVY 139 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 139 (347)
++|...+.||+|+||.||++... +++.||+|.+... .....+.+|..++..++|+||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 36777889999999999999954 6899999998642 22345788999999999999999999999999999999
Q ss_pred eecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcc
Q 040826 140 EFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES 219 (347)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 219 (347)
||+++|+|.+++.+....+++..+..++.|++.||.||| +++++||||||+|||++.++.++|+|||++........
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 157 (331)
T cd05597 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVH---QLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT 157 (331)
T ss_pred ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCC
Confidence 999999999999766667899999999999999999999 88999999999999999999999999999876543222
Q ss_pred ceeecccCCCCccccccccC-----CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccC
Q 040826 220 KVFTDVRGTIGYMDPEYMTN-----AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFED 294 (347)
Q Consensus 220 ~~~~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (347)
.......|+..|+|||++.+ ..++.++||||||+++|+|++|+.||...... +...... ...... .+
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~-~~~~~i~----~~~~~~-~~-- 229 (331)
T cd05597 158 VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV-ETYGKIM----NHKEHF-QF-- 229 (331)
T ss_pred ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHH-HHHHHHH----cCCCcc-cC--
Confidence 22233468999999999863 45788999999999999999999999743221 1111111 111000 00
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhccC--CCCCCCCHHHHHHH
Q 040826 295 PRLNGNINRADFESILKIAVLCVAK--SSKGRPTIDVVYEE 333 (347)
Q Consensus 295 ~~l~~~~~~~~~~~l~~l~~~cl~~--~p~~Rps~~ei~~~ 333 (347)
+... ....+.+.+++.+|+.. ++..||++.++++.
T Consensus 230 ~~~~----~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 230 PPDV----TDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred CCcc----CCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 0000 11335678888877654 34447899888765
No 184
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-43 Score=280.38 Aligned_cols=249 Identities=25% Similarity=0.371 Sum_probs=203.1
Q ss_pred cCcccCCeeeecCCeeEEEEE-eCCCCEEEEEEccc----CCChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEe
Q 040826 66 NNDWDRRFLGRGSAGLVYKGV-LPSGQVVAIKHIYK----SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYE 140 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 140 (347)
++|...+.||+|.|+.|+++. .++|+.+|+|.+.- ..+.+.+.+|+.+.+.++||||+++...+.+....++|||
T Consensus 11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe 90 (355)
T KOG0033|consen 11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 90 (355)
T ss_pred hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEe
Confidence 345555679999999999998 55899888887743 3456788999999999999999999999999999999999
Q ss_pred ecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecC---CCceEEeecccceecCCC
Q 040826 141 FCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTE---KLEPKLSDFGLAKMLGME 217 (347)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~---~~~~kl~dfg~~~~~~~~ 217 (347)
+++|+.|..-+-+. ..+++..+....+||+++|.|+| .++|+|||+||+|+++.. ..-+||+|||++..+.
T Consensus 91 ~m~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~yCH---~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~-- 164 (355)
T KOG0033|consen 91 LVTGGELFEDIVAR-EFYSEADASHCIQQILEALAYCH---SNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN-- 164 (355)
T ss_pred cccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeeeeccCCCceeecccceEEEeC--
Confidence 99999987766443 45788889999999999999999 899999999999999963 3459999999999876
Q ss_pred ccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCC
Q 040826 218 ESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRL 297 (347)
Q Consensus 218 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 297 (347)
+.....+..||+.|||||++...+|+..+|||+.|++||-|+.|.+||... +.......+..+...+. .|.+
T Consensus 165 ~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~-----~~~rlye~I~~g~yd~~---~~~w 236 (355)
T KOG0033|consen 165 DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE-----DQHRLYEQIKAGAYDYP---SPEW 236 (355)
T ss_pred CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCc-----cHHHHHHHHhccccCCC---Cccc
Confidence 455566788999999999999999999999999999999999999999742 11222333333432221 1111
Q ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 298 NGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 298 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
.. ..++..+|+.+||..||.+|.|+.|.+++
T Consensus 237 -~~----is~~Ak~LvrrML~~dP~kRIta~EAL~H 267 (355)
T KOG0033|consen 237 -DT----VTPEAKSLIRRMLTVNPKKRITADEALKH 267 (355)
T ss_pred -Cc----CCHHHHHHHHHHhccChhhhccHHHHhCC
Confidence 12 33579999999999999999999998753
No 185
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-40 Score=290.25 Aligned_cols=258 Identities=27% Similarity=0.398 Sum_probs=194.9
Q ss_pred CCeeeecCCeeEEEEEeCCCCEEEEEEcccCCChhHHHHHHHHhh--cCCCCcceeeeeEEEeCC----eEEEEEeecCC
Q 040826 71 RRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLS--RVRHPNLVCLFGCCVEGG----EQYLVYEFCAA 144 (347)
Q Consensus 71 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~--~l~h~niv~~~~~~~~~~----~~~lv~e~~~~ 144 (347)
.+++|+|.||.||+|.+ +++.||||++. ..+.+.|.+|-++.+ .+.|+||+.+++.-...+ .++||++|.+.
T Consensus 215 ~eli~~Grfg~V~KaqL-~~~~VAVKifp-~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~k 292 (534)
T KOG3653|consen 215 LELIGRGRFGCVWKAQL-DNRLVAVKIFP-EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPK 292 (534)
T ss_pred HHHhhcCccceeehhhc-cCceeEEEecC-HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccC
Confidence 35699999999999999 45999999884 444566777776655 457999999999866544 88999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhcc------CCCceeCCCCCCCEEecCCCceEEeecccceecCCCc
Q 040826 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYI------DGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE 218 (347)
Q Consensus 145 gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~------~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 218 (347)
|+|.++|.. ..++|....+++..+++||+|||+.. +.+|+|||||++|||+..|++..|+|||++..+....
T Consensus 293 GsL~dyL~~--ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~ 370 (534)
T KOG3653|consen 293 GSLCDYLKA--NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGK 370 (534)
T ss_pred CcHHHHHHh--ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCC
Confidence 999999954 56999999999999999999999754 4579999999999999999999999999999876432
Q ss_pred c-ceeecccCCCCccccccccCC-ccC-----CcccHHHHHHHHHHHHhCCCCcC--------CChh----hhhHHHHHH
Q 040826 219 S-KVFTDVRGTIGYMDPEYMTNA-KLT-----CASDIYSFGIVALQLLSGQKVIE--------LDFD----ARDQLTRKA 279 (347)
Q Consensus 219 ~-~~~~~~~~~~~y~aPE~~~~~-~~~-----~~~Dv~slG~il~~lltg~~p~~--------~~~~----~~~~~~~~~ 279 (347)
. ...-..+||.+|||||++.+. .+. .+.||||+|.+|||+++.-+-+. .++. ....+....
T Consensus 371 ~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq 450 (534)
T KOG3653|consen 371 PQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQ 450 (534)
T ss_pred CCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHH
Confidence 2 223447899999999999763 222 46899999999999998643332 1111 111122222
Q ss_pred hhhcCCCCCcccccCCCCCC-CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 040826 280 RDVSMGKRPIKDFEDPRLNG-NINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAW 338 (347)
Q Consensus 280 ~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~ 338 (347)
..+... ...|.+.. ......+..+++.+..||+.||+.|.|+.=+.+++..+.
T Consensus 451 ~~VV~k------K~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~ 504 (534)
T KOG3653|consen 451 ELVVRK------KQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELM 504 (534)
T ss_pred HHHHhh------ccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHh
Confidence 222111 11222221 122245578999999999999999999999999988874
No 186
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.6e-40 Score=300.16 Aligned_cols=191 Identities=26% Similarity=0.356 Sum_probs=166.0
Q ss_pred hcCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecC
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCA 143 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 143 (347)
..+|...+.||+|+||.||+|... +++.||+|..... ....|+.++++++||||+++++++......++|+|++.
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~----~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 140 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG----TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS 140 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc----ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC
Confidence 457999999999999999999964 5778999975433 23568999999999999999999999999999999996
Q ss_pred CCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceee
Q 040826 144 AGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT 223 (347)
Q Consensus 144 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 223 (347)
+ +|.+++......+++..+..++.|++.||.||| +.+++||||||+||+++.++.++|+|||++..... .....
T Consensus 141 ~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~--~~~~~ 214 (357)
T PHA03209 141 S-DLYTYLTKRSRPLPIDQALIIEKQILEGLRYLH---AQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVV--APAFL 214 (357)
T ss_pred C-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEecCcccccccc--Ccccc
Confidence 5 899988776677999999999999999999999 88999999999999999999999999999875321 12223
Q ss_pred cccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCc
Q 040826 224 DVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVI 265 (347)
Q Consensus 224 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~ 265 (347)
...||..|+|||.+.+..++.++||||||+++|+|+++..++
T Consensus 215 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 215 GLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred cccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 456899999999999989999999999999999999876555
No 187
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.7e-40 Score=301.86 Aligned_cols=260 Identities=22% Similarity=0.290 Sum_probs=196.3
Q ss_pred HhcCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccC----CChhHHHHHHHHhhcCCCCcceeeeeEEEeCC-----
Q 040826 64 AINNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKS----NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGG----- 133 (347)
Q Consensus 64 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----- 133 (347)
..++|...+.||+|+||.||++.. .+|..||+|.+... .....+.+|+.+++.++||||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 457888899999999999999995 46899999998643 22346778999999999999999999886543
Q ss_pred -eEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccce
Q 040826 134 -EQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAK 212 (347)
Q Consensus 134 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~ 212 (347)
..++||||+++ +|.+.+.. .+++..+..++.|++.||.||| +.|++||||||+||+++.++.++|+|||++.
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~~L~~LH---~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~ 171 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 171 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc---cCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEecCCCcc
Confidence 57999999986 67666532 3788899999999999999999 8899999999999999999999999999987
Q ss_pred ecCCCccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhh-----------
Q 040826 213 MLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARD----------- 281 (347)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~----------- 281 (347)
.... ........+|..|+|||.+.+..++.++||||||+++|+|++|+.||...... +........
T Consensus 172 ~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~ 248 (359)
T cd07876 172 TACT--NFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHI-DQWNKVIEQLGTPSAEFMNR 248 (359)
T ss_pred cccc--CccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCcHHHHHH
Confidence 5432 12233456899999999999999999999999999999999999999754221 111111111
Q ss_pred -------hcCCCCCccccc----CCCC----CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 282 -------VSMGKRPIKDFE----DPRL----NGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 282 -------~~~~~~~~~~~~----~~~l----~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
............ .+.+ ..........++.+|+.+||+.||++|||+.|+++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 249 LQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 100000000000 0000 001111223578999999999999999999999874
No 188
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.2e-40 Score=304.22 Aligned_cols=258 Identities=23% Similarity=0.281 Sum_probs=197.0
Q ss_pred CcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCC-----eEE
Q 040826 67 NDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGG-----EQY 136 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~ 136 (347)
+|...+.||+|+||.||++.. .+|+.||+|.+.... ....+.+|+.+++.++|+||+++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 356678899999999999995 478999999886532 2246788999999999999999999988766 789
Q ss_pred EEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCC
Q 040826 137 LVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM 216 (347)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 216 (347)
+|+||+.+ +|.+.+.. ...+++..+..++.|++.||.||| +.+++||||||+||+++.++.++|+|||++.....
T Consensus 81 lv~e~~~~-~l~~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~ 155 (372)
T cd07853 81 VVTELMQS-DLHKIIVS-PQPLSSDHVKVFLYQILRGLKYLH---SAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEP 155 (372)
T ss_pred EEeecccc-CHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHHEEECCCCCEEeccccceeeccc
Confidence 99999975 88887754 346899999999999999999999 88999999999999999999999999999987543
Q ss_pred CccceeecccCCCCccccccccCC-ccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhh-------------
Q 040826 217 EESKVFTDVRGTIGYMDPEYMTNA-KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDV------------- 282 (347)
Q Consensus 217 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~------------- 282 (347)
..........++..|+|||.+.+. .++.++|||||||++|+|++|+.||...... +.+..+....
T Consensus 156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~g~~~~~~~~~~~~ 234 (372)
T cd07853 156 DESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPI-QQLDLITDLLGTPSLEAMRSACE 234 (372)
T ss_pred CccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHH-HHHHHHHHHcCCCCHHHHHHhhH
Confidence 333333445678899999998874 5789999999999999999999999754321 1221111110
Q ss_pred ------cCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 283 ------SMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 283 ------~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
.......... . .+ ........+++.+|+.+||+.||.+|||+.|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~-~-~~-~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 235 GARAHILRGPHKPPSL-P-VL-YTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHHHHHHhCCCCCCch-H-Hh-cccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 0000000000 0 00 01111224678999999999999999999999864
No 189
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=2.1e-40 Score=294.40 Aligned_cols=257 Identities=24% Similarity=0.363 Sum_probs=202.0
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCC----EEEEEEcccCCCh---hHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQ----VVAIKHIYKSNNT---DSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYL 137 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~~~---~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 137 (347)
++|...+.||+|+||.||+|.+. +|. .+++|.+...... ..+.+|+.+++.++||||+++++++... ..++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~ 85 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL 85 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence 35566788999999999999853 454 4788888655432 3678899999999999999999988654 5679
Q ss_pred EEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCC
Q 040826 138 VYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217 (347)
Q Consensus 138 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 217 (347)
++||+++|+|.+++......+++..+..++.|++.||.||| +++++|+||||+||++++++.+||+|||++......
T Consensus 86 v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~ 162 (303)
T cd05110 86 VTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGD 162 (303)
T ss_pred eehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHh---hcCeeccccccceeeecCCCceEEccccccccccCc
Confidence 99999999999999776667899999999999999999999 889999999999999999999999999999865422
Q ss_pred ccc-eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCC
Q 040826 218 ESK-VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDP 295 (347)
Q Consensus 218 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (347)
... ......++..|+|||.+.+..++.++||||||+++|+|++ |..||..... ......... +... .
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~--~~~~~~~~~---~~~~-~----- 231 (303)
T cd05110 163 EKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT--REIPDLLEK---GERL-P----- 231 (303)
T ss_pred ccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHC---CCCC-C-----
Confidence 211 1222345678999999998899999999999999999997 8888864321 112222211 1110 0
Q ss_pred CCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhh
Q 040826 296 RLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWKNTM 342 (347)
Q Consensus 296 ~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~~~~ 342 (347)
....+...+.+++.+||..+|++||++.++++.|+++.++.-
T Consensus 232 -----~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~~ 273 (303)
T cd05110 232 -----QPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDPQ 273 (303)
T ss_pred -----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhchh
Confidence 011123568999999999999999999999999999876543
No 190
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=4.2e-40 Score=291.53 Aligned_cols=258 Identities=23% Similarity=0.314 Sum_probs=199.9
Q ss_pred cCcccCCeeeecCCeeEEEEEeCC-----------------CCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceee
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLPS-----------------GQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCL 125 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~~-----------------~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~ 125 (347)
.+|...+.||+|+||.||++.... +..|++|.+..... ...+.+|++++++++|||++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~ 84 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL 84 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 467788899999999999998532 24589998876543 3468889999999999999999
Q ss_pred eeEEEeCCeEEEEEeecCCCChHHHhhcCC----------CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCE
Q 040826 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKD----------SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNI 195 (347)
Q Consensus 126 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~----------~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Ni 195 (347)
++++..++..++++|++++++|.+++.... ..+++..++.++.|++.||.||| +.+++|+||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH---~~~i~H~dlkp~Ni 161 (296)
T cd05051 85 LGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLE---SLNFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHH---HcCccccccchhce
Confidence 999999999999999999999999986533 26899999999999999999999 78999999999999
Q ss_pred EecCCCceEEeecccceecCCCcc-ceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh--CCCCcCCChhhh
Q 040826 196 LLTEKLEPKLSDFGLAKMLGMEES-KVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS--GQKVIELDFDAR 272 (347)
Q Consensus 196 li~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt--g~~p~~~~~~~~ 272 (347)
+++.++.++|+|||++........ .......++..|+|||.+.+..++.++||||||+++|+|++ +..|+.... ..
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~-~~ 240 (296)
T cd05051 162 LVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLT-DQ 240 (296)
T ss_pred eecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcC-hH
Confidence 999999999999999876532221 11233446778999999988889999999999999999998 556664322 11
Q ss_pred hHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 040826 273 DQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEID 335 (347)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~ 335 (347)
+.+............... . ......++++.+++.+||+.||.+|||+.+|++.|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 241 QVIENAGHFFRDDGRQIY-L-------PRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred HHHHHHHhcccccccccc-C-------CCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 111111111111110000 0 111123367999999999999999999999999886
No 191
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.5e-40 Score=298.33 Aligned_cols=240 Identities=24% Similarity=0.323 Sum_probs=189.1
Q ss_pred CeeeecCCeeEEEEEeC-CCCEEEEEEcccCC-----ChhHHHHHHHHhhcC-CCCcceeeeeEEEeCCeEEEEEeecCC
Q 040826 72 RFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN-----NTDSFSREVEGLSRV-RHPNLVCLFGCCVEGGEQYLVYEFCAA 144 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 144 (347)
+.||+|+||.||+|... +++.+|+|.+.... ....+.+|..++.++ +||||+.+++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999954 67899999997542 223577888888888 699999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeec
Q 040826 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD 224 (347)
Q Consensus 145 gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 224 (347)
|+|.+++... ..+++..+..++.|++.||.||| +.+++||||||+||+++.++.++|+|||++...... ......
T Consensus 81 ~~L~~~~~~~-~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~-~~~~~~ 155 (327)
T cd05617 81 GDLMFHMQRQ-RKLPEEHARFYAAEICIALNFLH---ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP-GDTTST 155 (327)
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEeCCCCEEEeccccceeccCC-CCceec
Confidence 9999888543 45899999999999999999999 889999999999999999999999999998753211 122334
Q ss_pred ccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhh--hhHHHHHHhhhcCCCCCcccccCCCCCCCCC
Q 040826 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDA--RDQLTRKARDVSMGKRPIKDFEDPRLNGNIN 302 (347)
Q Consensus 225 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 302 (347)
..|+..|+|||.+.+..++.++||||||+++|+|++|+.||...... ..........+....... +
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~------------p 223 (327)
T cd05617 156 FCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRI------------P 223 (327)
T ss_pred ccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCC------------C
Confidence 56899999999999999999999999999999999999999632111 011111111111111111 1
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHH
Q 040826 303 RADFESILKIAVLCVAKSSKGRPTID 328 (347)
Q Consensus 303 ~~~~~~l~~l~~~cl~~~p~~Rps~~ 328 (347)
......+.+++.+||+.||.+||++.
T Consensus 224 ~~~~~~~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 224 RFLSVKASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred CCCCHHHHHHHHHHhccCHHHcCCCC
Confidence 11225688999999999999999853
No 192
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.3e-40 Score=298.20 Aligned_cols=239 Identities=21% Similarity=0.286 Sum_probs=190.7
Q ss_pred cccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccC-----CChhHHHHHHHHhhcCC-CCcceeeeeEEEeCCeEEEEEe
Q 040826 68 DWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKS-----NNTDSFSREVEGLSRVR-HPNLVCLFGCCVEGGEQYLVYE 140 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~-----~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e 140 (347)
|...+.||+|+||.||+|.. .+|+.||+|.+... .....+..|..++..+. |++++++++++.+.+..++|||
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05615 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVME 81 (323)
T ss_pred ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEc
Confidence 55678899999999999995 46899999998653 22345677888888875 5778889999999999999999
Q ss_pred ecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccc
Q 040826 141 FCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220 (347)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 220 (347)
|+++|+|.+++... ..+++..+..++.|++.||.||| +.|++||||||+||+++.++.++|+|||++...... ..
T Consensus 82 y~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~al~~lH---~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~-~~ 156 (323)
T cd05615 82 YVNGGDLMYHIQQV-GKFKEPQAVFYAAEISVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD-GV 156 (323)
T ss_pred CCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeccccccccCCC-Cc
Confidence 99999999988654 45899999999999999999999 889999999999999999999999999998754322 12
Q ss_pred eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCC
Q 040826 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGN 300 (347)
Q Consensus 221 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 300 (347)
......|+..|+|||++.+..++.++|+||||+++|+|++|+.||...... . ....+.......
T Consensus 157 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~-~----~~~~i~~~~~~~----------- 220 (323)
T cd05615 157 TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED-E----LFQSIMEHNVSY----------- 220 (323)
T ss_pred cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH-H----HHHHHHhCCCCC-----------
Confidence 233456899999999999989999999999999999999999999754321 1 111221111111
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHH
Q 040826 301 INRADFESILKIAVLCVAKSSKGRPTID 328 (347)
Q Consensus 301 ~~~~~~~~l~~l~~~cl~~~p~~Rps~~ 328 (347)
+.....++.+++.+||+++|.+|++..
T Consensus 221 -p~~~~~~~~~li~~~l~~~p~~R~~~~ 247 (323)
T cd05615 221 -PKSLSKEAVSICKGLMTKHPSKRLGCG 247 (323)
T ss_pred -CccCCHHHHHHHHHHcccCHhhCCCCC
Confidence 112235688999999999999999853
No 193
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.2e-40 Score=308.88 Aligned_cols=260 Identities=23% Similarity=0.234 Sum_probs=196.8
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCC
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAA 144 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 144 (347)
.+|...+.||+|+||.||++... +++.||+|... ...+.+|++++++++|+||+++++++..++..+++||++.
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~----~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~- 243 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW----YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR- 243 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc----ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-
Confidence 35888899999999999999965 57889999542 2346789999999999999999999999999999999996
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccc-eee
Q 040826 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK-VFT 223 (347)
Q Consensus 145 gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~-~~~ 223 (347)
++|.+++......+++..++.++.|++.||.||| +.||+||||||+|||++.++.++|+|||+++........ ...
T Consensus 244 ~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 320 (461)
T PHA03211 244 SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIH---GEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHY 320 (461)
T ss_pred CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEEECcCCHHHEEECCCCCEEEcccCCceeccccccccccc
Confidence 5999988766667999999999999999999999 889999999999999999999999999999865322211 122
Q ss_pred cccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCCh------hhhhHHHHHHhhhcCCCCCccccc----
Q 040826 224 DVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDF------DARDQLTRKARDVSMGKRPIKDFE---- 293 (347)
Q Consensus 224 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~---- 293 (347)
...||..|+|||++.+..++.++|||||||++|||++|..++.... ....++....+.............
T Consensus 321 ~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l 400 (461)
T PHA03211 321 GIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRL 400 (461)
T ss_pred ccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHH
Confidence 3568999999999999999999999999999999999886553211 111222222221110000000000
Q ss_pred ------------CCCCCC-CCC--HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 294 ------------DPRLNG-NIN--RADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 294 ------------~~~l~~-~~~--~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
.+.... ... ......+.+|+.+||+.||.+|||+.|+++.
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 401 VSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred HHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 000000 000 0112468899999999999999999999874
No 194
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=3e-40 Score=295.37 Aligned_cols=194 Identities=25% Similarity=0.386 Sum_probs=162.1
Q ss_pred CCeeeecCCeeEEEEEeC---CCCEEEEEEcccCCChhHHHHHHHHhhcCCCCcceeeeeEEEe--CCeEEEEEeecCCC
Q 040826 71 RRFLGRGSAGLVYKGVLP---SGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVE--GGEQYLVYEFCAAG 145 (347)
Q Consensus 71 ~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~~g 145 (347)
.++||+|+||.||+|... +++.+|+|.+..........+|+.++++++||||+++++++.. +...++++||+.+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~- 84 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH- 84 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC-
Confidence 467999999999999854 5678999999776666678899999999999999999998864 4568999999876
Q ss_pred ChHHHhhcC--------CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEe----cCCCceEEeeccccee
Q 040826 146 NLAQHLLRK--------DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILL----TEKLEPKLSDFGLAKM 213 (347)
Q Consensus 146 sL~~~l~~~--------~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili----~~~~~~kl~dfg~~~~ 213 (347)
+|.+++... ...+++..+..++.|++.||.||| +.+++||||||+|||+ +.++.+||+|||++..
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07868 85 DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceec
Confidence 888876421 235889999999999999999999 8899999999999999 4567899999999987
Q ss_pred cCCCcc--ceeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCC
Q 040826 214 LGMEES--KVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELD 268 (347)
Q Consensus 214 ~~~~~~--~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~ 268 (347)
...... .......+|..|+|||++.+ ..++.++|+||+||++|+|++|++||...
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred cCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 543211 12234568999999999876 46889999999999999999999999643
No 195
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=3.1e-40 Score=287.26 Aligned_cols=237 Identities=27% Similarity=0.404 Sum_probs=186.3
Q ss_pred CeeeecCCeeEEEEEeCC-------------CCEEEEEEcccCCC--hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEE
Q 040826 72 RFLGRGSAGLVYKGVLPS-------------GQVVAIKHIYKSNN--TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQY 136 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~~-------------~~~vavK~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 136 (347)
+.||+|+||.||+|+..+ ...+++|.+..... ...+..|+..++.++||||+++++++......+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 358999999999998532 22588898765432 346778899999999999999999999888999
Q ss_pred EEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCc-------eEEeecc
Q 040826 137 LVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLE-------PKLSDFG 209 (347)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~-------~kl~dfg 209 (347)
++|||+++++|..++......+++..++.++.|+++|++||| +++++|+||||+||+++.++. ++++|||
T Consensus 81 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g 157 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLE---DKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPG 157 (262)
T ss_pred EEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh---hCCeECCCCCcccEEEecCCccCCCCceeEeCCCC
Confidence 999999999999888766667999999999999999999999 889999999999999987664 8999999
Q ss_pred cceecCCCccceeecccCCCCcccccccc-CCccCCcccHHHHHHHHHHHH-hCCCCcCCChhhhhHHHHHHhhhcCCCC
Q 040826 210 LAKMLGMEESKVFTDVRGTIGYMDPEYMT-NAKLTCASDIYSFGIVALQLL-SGQKVIELDFDARDQLTRKARDVSMGKR 287 (347)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~~ll-tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 287 (347)
++..... .....++..|+|||.+. +..++.++||||||+++|+|+ +|..|+........ .. ...+..
T Consensus 158 ~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~--~~----~~~~~~ 226 (262)
T cd05077 158 IPITVLS-----RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK--ER----FYEGQC 226 (262)
T ss_pred CCccccC-----cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH--HH----HHhcCc
Confidence 8875432 12345778899999886 467889999999999999998 47776653221110 11 001110
Q ss_pred CcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 040826 288 PIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEI 334 (347)
Q Consensus 288 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l 334 (347)
. . ......++.+|+.+||+.||++||++.+|++.|
T Consensus 227 ~---~---------~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 227 M---L---------VTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred c---C---------CCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 0 0 001235789999999999999999999999876
No 196
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=7.7e-41 Score=306.08 Aligned_cols=250 Identities=21% Similarity=0.291 Sum_probs=194.2
Q ss_pred cCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC-----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN-----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVY 139 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 139 (347)
++|...+.||+|+||.||++.. .+|+.||+|.+.... ....+.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 3677788999999999999985 478999999886432 2245778999999999999999999999999999999
Q ss_pred eecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcc
Q 040826 140 EFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES 219 (347)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 219 (347)
||+++|+|.+++... ..+++..+..++.|++.||.||| +.|++||||||+|||++.++.++|+|||+++.......
T Consensus 81 E~~~gg~L~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH---~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 156 (377)
T cd05629 81 EFLPGGDLMTMLIKY-DTFSEDVTRFYMAECVLAIEAVH---KLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHD 156 (377)
T ss_pred eCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEEeecccccccccccc
Confidence 999999999988654 45889999999999999999999 88999999999999999999999999999863211000
Q ss_pred -------------c---------------------------------eeecccCCCCccccccccCCccCCcccHHHHHH
Q 040826 220 -------------K---------------------------------VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGI 253 (347)
Q Consensus 220 -------------~---------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~ 253 (347)
. ......||..|+|||++.+..++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv 236 (377)
T cd05629 157 SAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGA 236 (377)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecch
Confidence 0 001245899999999999989999999999999
Q ss_pred HHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCC---CCHHHH
Q 040826 254 VALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGR---PTIDVV 330 (347)
Q Consensus 254 il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~R---ps~~ei 330 (347)
++|+|++|..||...... +.+.... ...... ..|. ......++.+++.+|+. +|.+| +|+.++
T Consensus 237 il~elltG~~Pf~~~~~~-~~~~~i~----~~~~~~---~~p~-----~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~ 302 (377)
T cd05629 237 IMFECLIGWPPFCSENSH-ETYRKII----NWRETL---YFPD-----DIHLSVEAEDLIRRLIT-NAENRLGRGGAHEI 302 (377)
T ss_pred hhhhhhcCCCCCCCCCHH-HHHHHHH----ccCCcc---CCCC-----CCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHH
Confidence 999999999999754322 1111111 111000 0010 00122568889999997 66665 599888
Q ss_pred HHH
Q 040826 331 YEE 333 (347)
Q Consensus 331 ~~~ 333 (347)
+.+
T Consensus 303 l~h 305 (377)
T cd05629 303 KSH 305 (377)
T ss_pred hcC
Confidence 764
No 197
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=3.6e-40 Score=291.99 Aligned_cols=259 Identities=22% Similarity=0.328 Sum_probs=198.1
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-----------------CCCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceee
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-----------------SGQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCL 125 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-----------------~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~ 125 (347)
++|...+.||+|+||.||++... ++..+|+|.+..... ...+.+|+..++.++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 46778889999999999998532 234689999875432 3468899999999999999999
Q ss_pred eeEEEeCCeEEEEEeecCCCChHHHhhcCC----------CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCE
Q 040826 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKD----------SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNI 195 (347)
Q Consensus 126 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~----------~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Ni 195 (347)
++++...+..+++|||+++++|.+++.... ..+++..+..++.|++.|++||| +.+++|+||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dlkp~Ni 161 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLS---SLNFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCeecccCChheE
Confidence 999999999999999999999999986432 24678899999999999999999 88999999999999
Q ss_pred EecCCCceEEeecccceecCCCccce-eecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh--CCCCcCCChhhh
Q 040826 196 LLTEKLEPKLSDFGLAKMLGMEESKV-FTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS--GQKVIELDFDAR 272 (347)
Q Consensus 196 li~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt--g~~p~~~~~~~~ 272 (347)
+++.++.++|+|||++.......... .....++..|++||...+..++.++|+||||+++|+|++ |..|+..... .
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~-~ 240 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSD-E 240 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccCh-H
Confidence 99999999999999987653322211 122334678999999888889999999999999999998 6677753221 1
Q ss_pred hHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 040826 273 DQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDK 336 (347)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~ 336 (347)
+................ .. .....+...+.+++.+||+.||.+|||+.+|++.|++
T Consensus 241 ~~~~~~~~~~~~~~~~~---~~-----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 241 QVIENTGEFFRDQGRQV---YL-----PKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred HHHHHHHHHHhhccccc---cC-----CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 11111111110000000 00 0111233679999999999999999999999998863
No 198
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=2.4e-40 Score=293.80 Aligned_cols=261 Identities=22% Similarity=0.290 Sum_probs=199.4
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC---ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN---NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
++|...+.||+|+||.||+|... +++.||+|.+.... ....+.+|+..+++++||||+++++++...+..++|+||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 56778889999999999999854 68899999886432 234577899999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccce
Q 040826 142 CAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKV 221 (347)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 221 (347)
+++ +|.+++......+++..+..++.|+++||.||| +.+++|+||||+||+++.++.++|+|||++....... ..
T Consensus 86 ~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-~~ 160 (301)
T cd07873 86 LDK-DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT-KT 160 (301)
T ss_pred ccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC-Cc
Confidence 985 999988766667899999999999999999999 8899999999999999999999999999987643221 12
Q ss_pred eecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCC----------CCcc
Q 040826 222 FTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGK----------RPIK 290 (347)
Q Consensus 222 ~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~----------~~~~ 290 (347)
.....++..|+|||.+.+ ..++.++||||||+++|+|++|+.||..... .+............. ....
T Consensus 161 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (301)
T cd07873 161 YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTV-EEQLHFIFRILGTPTEETWPGILSNEEFK 239 (301)
T ss_pred ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHcCCCChhhchhhhcccccc
Confidence 223456889999998865 4578899999999999999999999975432 222221111111000 0000
Q ss_pred cccCCCCCC----CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 291 DFEDPRLNG----NINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 291 ~~~~~~l~~----~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
....+.... .........+.+|+.+||+.||.+|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 240 SYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred ccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 000111100 011122357889999999999999999999986
No 199
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=5.9e-41 Score=291.19 Aligned_cols=250 Identities=36% Similarity=0.477 Sum_probs=199.0
Q ss_pred cccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCChh----HHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeec
Q 040826 68 DWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTD----SFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFC 142 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~----~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 142 (347)
|...+.||+|+||.||++... +++.+|+|.+....... ...+|+..+++++||||+++++++.+....+++||++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 456678999999999999965 56689999998765433 2345899999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcccee
Q 040826 143 AAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVF 222 (347)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 222 (347)
++++|.+++. ....+++..+..++.|+++||.+|| +.+++|+||||+||++++++.++|+|||.+.... ......
T Consensus 81 ~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~Lh---~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~-~~~~~~ 155 (260)
T PF00069_consen 81 PGGSLQDYLQ-KNKPLSEEEILKIAYQILEALAYLH---SKGIVHRDIKPENILLDENGEVKLIDFGSSVKLS-ENNENF 155 (260)
T ss_dssp TTEBHHHHHH-HHSSBBHHHHHHHHHHHHHHHHHHH---HTTEEESSBSGGGEEESTTSEEEESSGTTTEEST-STTSEB
T ss_pred cccccccccc-ccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccc-cccccc
Confidence 9999999997 3455899999999999999999999 7899999999999999999999999999988641 223344
Q ss_pred ecccCCCCcccccccc-CCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCC
Q 040826 223 TDVRGTIGYMDPEYMT-NAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNI 301 (347)
Q Consensus 223 ~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 301 (347)
....++..|+|||.+. +..++.++|+||+|+++++|++|..|+...... +......+...... .. +. ..
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~-~~~~~~~~~~~~~~-~~-----~~---~~ 225 (260)
T PF00069_consen 156 NPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSD-DQLEIIEKILKRPL-PS-----SS---QQ 225 (260)
T ss_dssp SSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHH-HHHHHHHHHHHTHH-HH-----HT---TS
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccch-hhhhhhhhcccccc-cc-----cc---cc
Confidence 5567899999999998 888999999999999999999999999865111 11111111111000 00 00 00
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 302 NRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 302 ~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
.......+.+++.+||+.||++|||+.++++
T Consensus 226 ~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 226 SREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred cchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0011268999999999999999999999875
No 200
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.2e-40 Score=292.27 Aligned_cols=248 Identities=24% Similarity=0.369 Sum_probs=200.3
Q ss_pred cCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC--ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeec
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN--NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFC 142 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 142 (347)
.+|...+.||+|++|.||+|.. .+++.+++|.+.... ....+.+|+.+++.++|+|++++++.+..+...++||||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 4677778899999999999995 478899999886543 3456888999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcccee
Q 040826 143 AAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVF 222 (347)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 222 (347)
++++|.+++.+ ..+++.++..++.|++.||.||| +.|++|+||+|+||+++.++.++|+|||++....... ...
T Consensus 100 ~~~~L~~~~~~--~~~~~~~~~~i~~ql~~aL~~LH---~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~-~~~ 173 (296)
T cd06654 100 AGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SKR 173 (296)
T ss_pred CCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEECccccchhccccc-ccc
Confidence 99999998854 35789999999999999999999 8899999999999999999999999999887643221 112
Q ss_pred ecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCC
Q 040826 223 TDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNIN 302 (347)
Q Consensus 223 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 302 (347)
....++..|+|||.+.+..++.++|+||||+++|+|++|+.||......... .... ..+.... ...
T Consensus 174 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~-~~~~---~~~~~~~----------~~~ 239 (296)
T cd06654 174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL-YLIA---TNGTPEL----------QNP 239 (296)
T ss_pred CcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhH-HHHh---cCCCCCC----------CCc
Confidence 2346788999999999888899999999999999999999999754332211 1111 1111110 011
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 303 RADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 303 ~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
......+.+++.+||..+|.+|||+.+|++.
T Consensus 240 ~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 240 EKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred cccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 1233568999999999999999999999873
No 201
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=5.9e-40 Score=285.31 Aligned_cols=251 Identities=28% Similarity=0.373 Sum_probs=202.7
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC--ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeec
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN--NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFC 142 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 142 (347)
++|...+.||.|+||.||++... +++.+++|.+.... ....+.+|++++++++|||++++++.+.+....+++|||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 46777889999999999999954 67889999887543 3457889999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcccee
Q 040826 143 AAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVF 222 (347)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 222 (347)
++++|.+++......+++..+..++.|++.|+.||| +.+++|+||+|+||++++++.++|+|||.+...... ....
T Consensus 83 ~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~-~~~~ 158 (262)
T cd06613 83 GGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLH---ETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTAT-IAKR 158 (262)
T ss_pred CCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCceecCCChhhEEECCCCCEEECccccchhhhhh-hhcc
Confidence 999999988766567999999999999999999999 889999999999999999999999999998765321 1122
Q ss_pred ecccCCCCccccccccCC---ccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCC
Q 040826 223 TDVRGTIGYMDPEYMTNA---KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNG 299 (347)
Q Consensus 223 ~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 299 (347)
....++..|+|||.+.+. .++.++|+||||+++|+|++|+.|+......... ........ . .+.+
T Consensus 159 ~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~-~~~~~~~~----~-----~~~~-- 226 (262)
T cd06613 159 KSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRAL-FLISKSNF----P-----PPKL-- 226 (262)
T ss_pred ccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHhccC----C-----Cccc--
Confidence 334678899999999776 7889999999999999999999998753322211 11111100 0 0010
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 300 NINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 300 ~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
........++.+++.+||+.+|.+|||+.+|+.
T Consensus 227 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 227 KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 112234567999999999999999999999875
No 202
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=6.1e-41 Score=300.70 Aligned_cols=238 Identities=25% Similarity=0.272 Sum_probs=187.4
Q ss_pred CeeeecCCeeEEEEEeC-CCCEEEEEEcccCC-----ChhHHHHHH-HHhhcCCCCcceeeeeEEEeCCeEEEEEeecCC
Q 040826 72 RFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN-----NTDSFSREV-EGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAA 144 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~e~-~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 144 (347)
+.||+|+||.||+|... +++.+|+|.+.... ....+..|. ..++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 36999999999999965 67889999986532 222344444 356788999999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeec
Q 040826 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD 224 (347)
Q Consensus 145 gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 224 (347)
|+|.+++... ..+++..+..++.|+++||.||| +.|++||||||+||+++.++.++|+|||++...... ......
T Consensus 81 ~~L~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH---~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~-~~~~~~ 155 (325)
T cd05602 81 GELFYHLQRE-RCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH-NGTTST 155 (325)
T ss_pred CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEEccCCCCcccccC-CCCccc
Confidence 9999988654 45788889999999999999999 889999999999999999999999999998753211 222334
Q ss_pred ccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHH
Q 040826 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRA 304 (347)
Q Consensus 225 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 304 (347)
..|+..|+|||.+.+..++.++||||||+++|+|++|..||...... .... .+...... . ...
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~----~i~~~~~~--------~----~~~ 218 (325)
T cd05602 156 FCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA-EMYD----NILNKPLQ--------L----KPN 218 (325)
T ss_pred ccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHH-HHHH----HHHhCCcC--------C----CCC
Confidence 56899999999999999999999999999999999999999743322 1111 11111111 1 112
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHH
Q 040826 305 DFESILKIAVLCVAKSSKGRPTIDVVY 331 (347)
Q Consensus 305 ~~~~l~~l~~~cl~~~p~~Rps~~ei~ 331 (347)
....+.+++.+||+.||.+||++.+.+
T Consensus 219 ~~~~~~~li~~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 219 ITNSARHLLEGLLQKDRTKRLGAKDDF 245 (325)
T ss_pred CCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence 235689999999999999999987543
No 203
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=5.5e-40 Score=292.40 Aligned_cols=256 Identities=26% Similarity=0.327 Sum_probs=198.9
Q ss_pred CcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeec
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFC 142 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 142 (347)
+|...+.||+|+||.||++... +|..+++|.+..... ...+.+|++++++++||||+++++++.+++..++++||+
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~ 81 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHM 81 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeecc
Confidence 5778889999999999999954 688899998865432 245788999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcccee
Q 040826 143 AAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVF 222 (347)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 222 (347)
++++|.+++... ..+++..+..++.|+++||.|||+ ..+++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 82 ~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~---~~ 155 (308)
T cd06615 82 DGGSLDQVLKKA-GRIPENILGKISIAVLRGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MA 155 (308)
T ss_pred CCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh--hCCEEECCCChHHEEEecCCcEEEccCCCccccccc---cc
Confidence 999999998654 458999999999999999999994 258999999999999999999999999988754221 12
Q ss_pred ecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcC-CCCCcc-----------
Q 040826 223 TDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSM-GKRPIK----------- 290 (347)
Q Consensus 223 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~----------- 290 (347)
....++..|+|||.+.+..++.++|+||||+++|+|++|+.||...... ........... ...+..
T Consensus 156 ~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (308)
T cd06615 156 NSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAK--ELEAMFGRPVSEGEAKESHRPVSGHPPDS 233 (308)
T ss_pred ccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchh--hHHHhhcCccccccccCCcccccCCCCCc
Confidence 3346889999999998888999999999999999999999998643211 11111110000 000000
Q ss_pred --------------cccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 291 --------------DFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 291 --------------~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
.-..+.+. ......++.+++.+||+.+|++|||+.++++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 234 PRPMAIFELLDYIVNEPPPKLP---SGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred cchhhHHHHHHHHhcCCCccCc---CcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000000 01134579999999999999999999999876
No 204
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=5e-40 Score=288.62 Aligned_cols=246 Identities=23% Similarity=0.314 Sum_probs=195.3
Q ss_pred CcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeec
Q 040826 67 NDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFC 142 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 142 (347)
+|...++||+|+||.||+|.. .+++.+|+|.+..... ...+.+|+.++++++|||++++++.+...+..++|+||+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 456678899999999999984 5788999998865432 346888999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcccee
Q 040826 143 AAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVF 222 (347)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 222 (347)
++++|..+. .+++..+..++.|++.|+.||| +.+++|+||||+||+++.++.++|+|||++...... ..
T Consensus 82 ~~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~---~~ 150 (279)
T cd06619 82 DGGSLDVYR-----KIPEHVLGRIAVAVVKGLTYLW---SLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS---IA 150 (279)
T ss_pred CCCChHHhh-----cCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc---cc
Confidence 999986542 4688889999999999999999 889999999999999999999999999998765321 22
Q ss_pred ecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhH--HHHHHhhhcCCCCCcccccCCCCCCC
Q 040826 223 TDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQ--LTRKARDVSMGKRPIKDFEDPRLNGN 300 (347)
Q Consensus 223 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~ 300 (347)
....++..|+|||.+.+..++.++|+||||+++|+|++|+.||......... ............. +.+.
T Consensus 151 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~-- 221 (279)
T cd06619 151 KTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDP-------PVLP-- 221 (279)
T ss_pred cCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCC-------CCCC--
Confidence 3356889999999999888999999999999999999999998643221111 1111111111110 0110
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 301 INRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 301 ~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
......++.+++.+||+.+|.+||+++++++.
T Consensus 222 -~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 222 -VGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred -CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 11123568999999999999999999999865
No 205
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=3e-40 Score=288.25 Aligned_cols=252 Identities=24% Similarity=0.336 Sum_probs=197.3
Q ss_pred HhcCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCCC--hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEe
Q 040826 64 AINNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNN--TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYE 140 (347)
Q Consensus 64 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 140 (347)
.++++.....||+|+||.||+|.. .++..|++|.+..... ...+.+|+.++++++|+||+++++++..++..++++|
T Consensus 6 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 85 (268)
T cd06624 6 EYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFME 85 (268)
T ss_pred ccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEe
Confidence 455555667899999999999994 4678899998865533 3468899999999999999999999999999999999
Q ss_pred ecCCCChHHHhhcCCCCC--CHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecC-CCceEEeecccceecCCC
Q 040826 141 FCAAGNLAQHLLRKDSVL--TWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTE-KLEPKLSDFGLAKMLGME 217 (347)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~--~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~-~~~~kl~dfg~~~~~~~~ 217 (347)
|+++++|.+++......+ ++..+..++.|++.|+.||| +.+++|+||+|+||+++. ++.++|+|||.+......
T Consensus 86 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~ 162 (268)
T cd06624 86 QVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLH---DNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGI 162 (268)
T ss_pred cCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCeEEEecchhheecccC
Confidence 999999999997654445 78888999999999999999 889999999999999986 679999999998765321
Q ss_pred ccceeecccCCCCccccccccCC--ccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCC
Q 040826 218 ESKVFTDVRGTIGYMDPEYMTNA--KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDP 295 (347)
Q Consensus 218 ~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (347)
. .......++..|+|||.+.+. .++.++|+||||+++|+|++|..|+.......... ....... . .+
T Consensus 163 ~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~--~~~~~~~-~-------~~ 231 (268)
T cd06624 163 N-PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAM--FKVGMFK-I-------HP 231 (268)
T ss_pred C-CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhH--hhhhhhc-c-------CC
Confidence 1 122234578899999998654 37889999999999999999999986422111111 1000000 0 01
Q ss_pred CCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 296 RLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 296 ~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
.++....+++.+++.+||+.+|.+|||+.++++.
T Consensus 232 ----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 232 ----EIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred ----CCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 1222334679999999999999999999999763
No 206
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=4.4e-40 Score=286.76 Aligned_cols=248 Identities=25% Similarity=0.399 Sum_probs=198.4
Q ss_pred CcccCCeeeecCCeeEEEEEeCCCCEEEEEEcccCCC--------hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEE
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNN--------TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLV 138 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--------~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 138 (347)
+|...+.||+|+||.||+|...+|+.+|+|.+..... ...+.+|++.+++++|+||+++++++.+.+..+++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 3566788999999999999988899999998864321 23578899999999999999999999999999999
Q ss_pred EeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCC-
Q 040826 139 YEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME- 217 (347)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~- 217 (347)
+||+++++|.+++.+. ..+++..+..++.|++.|++||| +.+++|+||+|+||++++++.++|+|||.+......
T Consensus 81 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 156 (265)
T cd06631 81 MEFVPGGSISSILNRF-GPLPEPVFCKYTKQILDGVAYLH---NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVG 156 (265)
T ss_pred EecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhcc
Confidence 9999999999998654 35789999999999999999999 789999999999999999999999999988754211
Q ss_pred ----ccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCccccc
Q 040826 218 ----ESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFE 293 (347)
Q Consensus 218 ----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (347)
.........++..|+|||.+.+..++.++|+||||+++|+|++|..||......... ..... ....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~-~~~~~----~~~~----- 226 (265)
T cd06631 157 LHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAM-FYIGA----HRGL----- 226 (265)
T ss_pred ccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHH-HHhhh----ccCC-----
Confidence 111123345888999999999888999999999999999999999999643222111 11110 0000
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 294 DPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 294 ~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
.+.+ .....+++.+++.+||+.+|.+|||+.++++
T Consensus 227 ~~~~----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 227 MPRL----PDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred CCCC----CCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0111 1123357899999999999999999999875
No 207
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=4.2e-40 Score=285.56 Aligned_cols=245 Identities=25% Similarity=0.406 Sum_probs=196.3
Q ss_pred CeeeecCCeeEEEEEeCC--CC--EEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCC
Q 040826 72 RFLGRGSAGLVYKGVLPS--GQ--VVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAA 144 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~~--~~--~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 144 (347)
+.||+|++|.||+|.+.+ ++ .+++|.+..... ...+.+|+..+++++||||+++++.+.. ...++++||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 358999999999998543 33 689999876544 3468899999999999999999999888 889999999999
Q ss_pred CChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccc--e
Q 040826 145 GNLAQHLLRKD-SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK--V 221 (347)
Q Consensus 145 gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~--~ 221 (347)
++|.+++.+.. ..+++...+.++.|+++||.||| +++++|+||+|+||+++.++.++|+|||++......... .
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 156 (257)
T cd05040 80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLE---SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVM 156 (257)
T ss_pred CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHH---hCCccccccCcccEEEecCCEEEeccccccccccccccceec
Confidence 99999997654 56899999999999999999999 889999999999999999999999999998876432211 1
Q ss_pred eecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCC
Q 040826 222 FTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGN 300 (347)
Q Consensus 222 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 300 (347)
.....++..|+|||.+.+..++.++|+||||+++|+|++ |..|+...... +....... ..... .
T Consensus 157 ~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-~~~~~~~~---~~~~~-----------~ 221 (257)
T cd05040 157 EEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS-QILKKIDK---EGERL-----------E 221 (257)
T ss_pred ccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHh---cCCcC-----------C
Confidence 112346788999999998889999999999999999998 99988643221 11111111 11100 0
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 040826 301 INRADFESILKIAVLCVAKSSKGRPTIDVVYEEID 335 (347)
Q Consensus 301 ~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~ 335 (347)
.+...+..+.+++.+||+.+|++|||+.++++.|.
T Consensus 222 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 222 RPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred CCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 11123367999999999999999999999999885
No 208
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.4e-40 Score=292.84 Aligned_cols=261 Identities=22% Similarity=0.305 Sum_probs=199.7
Q ss_pred CcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC----hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN----TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
+|...+.||+|+||.||+|... +|+.+++|.+..... ...+.+|+.++++++|||++++++++.+....++++||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 3666788999999999999964 789999998865322 24577899999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccce
Q 040826 142 CAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKV 221 (347)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 221 (347)
+++ +|.+++......+++..++.++.|+++||.||| +.+++|+||+|+||+++.++.++|+|||++....... ..
T Consensus 81 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-~~ 155 (284)
T cd07839 81 CDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCH---SHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV-RC 155 (284)
T ss_pred CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCC-CC
Confidence 975 888888665667999999999999999999999 7899999999999999999999999999988654221 22
Q ss_pred eecccCCCCccccccccCC-ccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCC-------Ccccc-
Q 040826 222 FTDVRGTIGYMDPEYMTNA-KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKR-------PIKDF- 292 (347)
Q Consensus 222 ~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~- 292 (347)
.....++..|+|||.+.+. .++.++||||||+++|+|+||..|+.........+....+....... .....
T Consensus 156 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd07839 156 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYK 235 (284)
T ss_pred cCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhccccc
Confidence 2334578899999988764 47889999999999999999999875544433333332222111000 00000
Q ss_pred cCCCCCC-----CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 293 EDPRLNG-----NINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 293 ~~~~l~~-----~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
..+.... .......+++.+++.+||+.||.+|||++++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 236 PYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred ccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 0000000 111123467899999999999999999999976
No 209
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=2.6e-40 Score=291.69 Aligned_cols=259 Identities=27% Similarity=0.336 Sum_probs=193.3
Q ss_pred CcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC----ChhHHHHHHHHhhcC---CCCcceeeeeEEEe-----CC
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN----NTDSFSREVEGLSRV---RHPNLVCLFGCCVE-----GG 133 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~e~~~l~~l---~h~niv~~~~~~~~-----~~ 133 (347)
+|...+.||+|+||.||+|... +|+.||+|.+.... ......+|+.+++++ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4667788999999999999954 78999999886532 123456777777665 69999999998764 34
Q ss_pred eEEEEEeecCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccce
Q 040826 134 EQYLVYEFCAAGNLAQHLLRK-DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAK 212 (347)
Q Consensus 134 ~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~ 212 (347)
..++++||+++ +|.+++... ...+++..+..++.|++.||.||| +.|++|+||||+||+++.++.++|+|||++.
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~kl~dfg~~~ 156 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGQVKLADFGLAR 156 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccCccc
Confidence 57999999986 898888653 345899999999999999999999 8899999999999999999999999999988
Q ss_pred ecCCCccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCC-CCcc-
Q 040826 213 MLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGK-RPIK- 290 (347)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~- 290 (347)
..... .......++..|+|||.+.+..++.++||||+|+++|+|++|.+||...... +.+........... ....
T Consensus 157 ~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~-~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07863 157 IYSCQ--MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGKIFDLIGLPPEDDWPR 233 (288)
T ss_pred cccCc--ccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHH-HHHHHHHHHhCCCChhhCcc
Confidence 65322 1223346789999999999889999999999999999999999998644322 22222222111000 0000
Q ss_pred ------cccCCCC---CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 291 ------DFEDPRL---NGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 291 ------~~~~~~l---~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
....+.. .....++..+++.+++.+||+.||.+|||+.+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 234 DVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred cccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000000 00111233467899999999999999999999875
No 210
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=3.5e-41 Score=302.28 Aligned_cols=237 Identities=27% Similarity=0.284 Sum_probs=187.6
Q ss_pred CeeeecCCeeEEEEEe-CCCCEEEEEEcccCC-----ChhHHHHHHH-HhhcCCCCcceeeeeEEEeCCeEEEEEeecCC
Q 040826 72 RFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN-----NTDSFSREVE-GLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAA 144 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-----~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 144 (347)
+.||+|+||.||++.. .+|+.+|+|.+.... ....+..|.. +++.++||||+++++.+..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 3599999999999995 478999999986531 2234455554 46778999999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeec
Q 040826 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD 224 (347)
Q Consensus 145 gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 224 (347)
|+|.+++.. ...+++..+..++.|++.||.||| +.|++||||||+||+++.++.++|+|||++...... ......
T Consensus 81 ~~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~lH---~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~-~~~~~~ 155 (325)
T cd05604 81 GELFFHLQR-ERSFPEPRARFYAAEIASALGYLH---SINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ-SDTTTT 155 (325)
T ss_pred CCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCC-CCCccc
Confidence 999988854 346899999999999999999999 889999999999999999999999999998753211 122334
Q ss_pred ccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHH
Q 040826 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRA 304 (347)
Q Consensus 225 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 304 (347)
..|+..|+|||.+.+..++.++||||||+++|+|++|..||...... . ........... + .+.
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~-~----~~~~~~~~~~~--------~----~~~ 218 (325)
T cd05604 156 FCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA-E----MYDNILHKPLV--------L----RPG 218 (325)
T ss_pred ccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH-H----HHHHHHcCCcc--------C----CCC
Confidence 56899999999999999999999999999999999999999753221 1 11222111111 0 111
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHH
Q 040826 305 DFESILKIAVLCVAKSSKGRPTIDVV 330 (347)
Q Consensus 305 ~~~~l~~l~~~cl~~~p~~Rps~~ei 330 (347)
....+.+++.+|++.+|.+||++.+.
T Consensus 219 ~~~~~~~ll~~ll~~~p~~R~~~~~~ 244 (325)
T cd05604 219 ASLTAWSILEELLEKDRQRRLGAKED 244 (325)
T ss_pred CCHHHHHHHHHHhccCHHhcCCCCCC
Confidence 23568899999999999999998643
No 211
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=3e-40 Score=319.87 Aligned_cols=258 Identities=23% Similarity=0.343 Sum_probs=202.8
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC-----hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN-----TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVY 139 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 139 (347)
++|...++||+|+||.||+|... +|+.||+|++..... ...+.+|++++++++|||++++++++.+.+..+++|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 46788899999999999999954 689999999875422 246889999999999999999999999999999999
Q ss_pred eecCCCChHHHhhcC----------CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecc
Q 040826 140 EFCAAGNLAQHLLRK----------DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFG 209 (347)
Q Consensus 140 e~~~~gsL~~~l~~~----------~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg 209 (347)
||++||+|.+++... ....++..++.++.|+++||+||| +.|++||||||+||+++.++.++|+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLH---s~GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVH---SKGVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHH---HCCccccCCchheEEEcCCCCEEEEecC
Confidence 999999999988531 133566788899999999999999 8899999999999999999999999999
Q ss_pred cceecCCCcc-----------------ceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhh
Q 040826 210 LAKMLGMEES-----------------KVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDAR 272 (347)
Q Consensus 210 ~~~~~~~~~~-----------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~ 272 (347)
++........ .......||+.|+|||.+.+..++.++|||||||++|+|+||+.||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 9986521100 01122468999999999999999999999999999999999999997422111
Q ss_pred hHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCC-CCHHHHHHHHHHHHHh
Q 040826 273 DQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGR-PTIDVVYEEIDKAWKN 340 (347)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~R-ps~~ei~~~l~~~~~~ 340 (347)
.. ........... .+ ..+.+..+.+++.+||+.||++| ++++++.+.|+..++.
T Consensus 239 i~----~~~~i~~P~~~----~p------~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~ 293 (932)
T PRK13184 239 IS----YRDVILSPIEV----AP------YREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQG 293 (932)
T ss_pred hh----hhhhccChhhc----cc------cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 10 00100000000 00 11233578899999999999999 5678888888887664
No 212
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=5.6e-40 Score=286.77 Aligned_cols=248 Identities=25% Similarity=0.339 Sum_probs=188.8
Q ss_pred eeeecCCeeEEEEEeC---CCCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCCCC
Q 040826 73 FLGRGSAGLVYKGVLP---SGQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGN 146 (347)
Q Consensus 73 ~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs 146 (347)
.||+|+||.||+|... ++..+++|.+..... ...+.+|+..+++++||||+++++++.+....++||||+++|+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD 81 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence 5999999999999854 345789998865433 2367889999999999999999999998889999999999999
Q ss_pred hHHHhhcC----CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccce-
Q 040826 147 LAQHLLRK----DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKV- 221 (347)
Q Consensus 147 L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~- 221 (347)
|.+++... ....++..+..++.|++.|+.||| +.+++|+||||+||+++.++.++|+|||.+..........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~ 158 (269)
T cd05087 82 LKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH---KNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVT 158 (269)
T ss_pred HHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEECCccccccccCcceeec
Confidence 99998642 224567788899999999999999 8899999999999999999999999999987543222111
Q ss_pred eecccCCCCccccccccCC-------ccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCccccc
Q 040826 222 FTDVRGTIGYMDPEYMTNA-------KLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFE 293 (347)
Q Consensus 222 ~~~~~~~~~y~aPE~~~~~-------~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (347)
.....++..|+|||++.+. .++.++|+||||+++|+|++ |+.||........ ....... . .....
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~-~~~~~~~---~---~~~~~ 231 (269)
T cd05087 159 PDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV-LTYTVRE---Q---QLKLP 231 (269)
T ss_pred CCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHH-HHHHhhc---c---cCCCC
Confidence 1234567889999988642 35789999999999999996 9988864332221 1111111 1 11112
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 040826 294 DPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEID 335 (347)
Q Consensus 294 ~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~ 335 (347)
.+.+... ..+.+.+++..|| .+|++|||+++|...|+
T Consensus 232 ~~~~~~~----~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 232 KPRLKLP----LSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCccCCC----CChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 2222212 2246888999999 68999999999998875
No 213
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=7e-40 Score=289.60 Aligned_cols=249 Identities=26% Similarity=0.320 Sum_probs=198.1
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC--hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeec
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN--TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFC 142 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 142 (347)
+.|...+.||+|+||.||+|... ++..+++|.+..... ...+.+|+..++.++|+|++++++.+..++..++||||+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 45777888999999999999964 588999999865433 346788999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcccee
Q 040826 143 AAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVF 222 (347)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 222 (347)
++++|..++.+....+++..+..++.|++.++.||| +.+++|+||+|+||+++.++.++|+|||++...... ....
T Consensus 92 ~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~-~~~~ 167 (292)
T cd06644 92 PGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLH---SMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT-LQRR 167 (292)
T ss_pred CCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh---cCCeeecCCCcceEEEcCCCCEEEccCccceecccc-cccc
Confidence 999999888766667899999999999999999999 889999999999999999999999999988754221 1122
Q ss_pred ecccCCCCcccccccc-----CCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCC
Q 040826 223 TDVRGTIGYMDPEYMT-----NAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRL 297 (347)
Q Consensus 223 ~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 297 (347)
....++..|+|||.+. ...++.++|+||||+++|+|++|..||...... ... ........+ ..
T Consensus 168 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-~~~----~~~~~~~~~--~~----- 235 (292)
T cd06644 168 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM-RVL----LKIAKSEPP--TL----- 235 (292)
T ss_pred ceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH-HHH----HHHhcCCCc--cC-----
Confidence 3345788999999884 345788999999999999999999998643211 111 111111111 00
Q ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 298 NGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 298 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
........++.+++.+||+.+|++||++.++++
T Consensus 236 --~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 236 --SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred --CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 011122346889999999999999999999976
No 214
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=2.4e-40 Score=288.34 Aligned_cols=250 Identities=26% Similarity=0.388 Sum_probs=202.1
Q ss_pred CcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeec
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFC 142 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 142 (347)
+|...+.||+|++|.||++... +++.+++|.+..... ...+.+|++.+++++||||+++++.+...+..++++||+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 4566678999999999999965 689999998876533 346888999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccC-CCceeCCCCCCCEEecCCCceEEeecccceecCCCccce
Q 040826 143 AAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYID-GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKV 221 (347)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~-~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 221 (347)
++++|.+++......+++.....++.|++.|+.||| + .+++|+||+|+||++++++.++|+|||.+........
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~-- 156 (265)
T cd06605 82 DGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLH---EKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA-- 156 (265)
T ss_pred CCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHc---CCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHh--
Confidence 999999998765567899999999999999999999 7 8999999999999999999999999998876532111
Q ss_pred eecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCC
Q 040826 222 FTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNI 301 (347)
Q Consensus 222 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 301 (347)
....++..|+|||.+.+..++.++|+||||+++|+|++|+.|+..............+.......+ .+...
T Consensus 157 -~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~- 227 (265)
T cd06605 157 -KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPP-------RLPSG- 227 (265)
T ss_pred -hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCC-------CCChh-
Confidence 125688899999999988999999999999999999999999875432222222222222222111 11001
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 302 NRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 302 ~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
....++.+++.+||..||++|||+.+++.
T Consensus 228 --~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 228 --KFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred --hcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 13457999999999999999999999875
No 215
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=5e-40 Score=284.96 Aligned_cols=246 Identities=28% Similarity=0.442 Sum_probs=197.7
Q ss_pred cCCeeeecCCeeEEEEEeCC-----CCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 70 DRRFLGRGSAGLVYKGVLPS-----GQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 70 ~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
..+.||.|+||.||++.... +..+|+|.+..... ...+.+|+..++.++|+|++++++++.+.+..+++|||
T Consensus 3 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~ 82 (258)
T smart00219 3 LGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEY 82 (258)
T ss_pred ccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEec
Confidence 45779999999999999643 37899999976543 45788999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCC-CCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccc
Q 040826 142 CAAGNLAQHLLRKDSV-LTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220 (347)
Q Consensus 142 ~~~gsL~~~l~~~~~~-~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 220 (347)
+++++|.+++...... +++..+..++.|++.|+++|| +.+++|+||+|+||++++++.++++|||.+.........
T Consensus 83 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh---~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~ 159 (258)
T smart00219 83 MEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYY 159 (258)
T ss_pred cCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHh---cCCeeecccccceEEEccCCeEEEcccCCceeccccccc
Confidence 9999999999765444 899999999999999999999 889999999999999999999999999999876433222
Q ss_pred eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCC
Q 040826 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNG 299 (347)
Q Consensus 221 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 299 (347)
......++..|+|||.+.+..++.++|+||+|+++++|++ |..|+... ....... ........
T Consensus 160 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~-~~~~~~~----~~~~~~~~----------- 223 (258)
T smart00219 160 KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGM-SNEEVLE----YLKKGYRL----------- 223 (258)
T ss_pred ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC-CHHHHHH----HHhcCCCC-----------
Confidence 2212346789999999988889999999999999999998 67776532 1111111 11111110
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 040826 300 NINRADFESILKIAVLCVAKSSKGRPTIDVVYEEI 334 (347)
Q Consensus 300 ~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l 334 (347)
........++.+++.+||..+|++|||+.++++.|
T Consensus 224 ~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 224 PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 01111345799999999999999999999998764
No 216
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=4.5e-40 Score=288.06 Aligned_cols=237 Identities=24% Similarity=0.374 Sum_probs=185.6
Q ss_pred eeeecCCeeEEEEEeCC-------------------------CCEEEEEEcccCCC--hhHHHHHHHHhhcCCCCcceee
Q 040826 73 FLGRGSAGLVYKGVLPS-------------------------GQVVAIKHIYKSNN--TDSFSREVEGLSRVRHPNLVCL 125 (347)
Q Consensus 73 ~lg~G~~g~V~~~~~~~-------------------------~~~vavK~~~~~~~--~~~~~~e~~~l~~l~h~niv~~ 125 (347)
+||+|+||.||+|.... ...|++|.+..... ...+.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 59999999999997421 13588888865432 2467788999999999999999
Q ss_pred eeEEEeCCeEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCC----
Q 040826 126 FGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKL---- 201 (347)
Q Consensus 126 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~---- 201 (347)
++++.+....++||||+++|+|..++......+++..+..++.|++.||+||| +++++||||||+||++++.+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~Nill~~~~~~~~ 158 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLE---DKNLVHGNVCAKNILLARLGLAEG 158 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---cCCccCCCCCcccEEEeccCcccC
Confidence 99999999999999999999999988766667899999999999999999999 88999999999999998644
Q ss_pred ---ceEEeecccceecCCCccceeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHH-hCCCCcCCChhhhhHHH
Q 040826 202 ---EPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLL-SGQKVIELDFDARDQLT 276 (347)
Q Consensus 202 ---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~ll-tg~~p~~~~~~~~~~~~ 276 (347)
.++++|||.+...... ....++..|+|||.+.+ ..++.++|+||||+++|+++ +|..|+....... ..
T Consensus 159 ~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~--~~ 231 (274)
T cd05076 159 TSPFIKLSDPGVSFTALSR-----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE--KE 231 (274)
T ss_pred ccceeeecCCccccccccc-----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH--HH
Confidence 3799999987643211 22346788999998865 56889999999999999995 6888876432211 11
Q ss_pred HHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 040826 277 RKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEID 335 (347)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~ 335 (347)
..... ..... .. ....+.+++.+||+.+|++|||+.+|++.|+
T Consensus 232 ~~~~~----~~~~~--------~~----~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 232 RFYEK----KHRLP--------EP----SCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred HHHHh----ccCCC--------CC----CChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 11111 00000 01 1246899999999999999999999998873
No 217
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.7e-40 Score=301.46 Aligned_cols=260 Identities=23% Similarity=0.296 Sum_probs=197.2
Q ss_pred HhcCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC----ChhHHHHHHHHhhcCCCCcceeeeeEEEeC------
Q 040826 64 AINNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLVCLFGCCVEG------ 132 (347)
Q Consensus 64 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------ 132 (347)
..++|...+.||+|+||.||++.. .+++.+|+|.+.... ....+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 457888899999999999999985 468899999987542 224577899999999999999999988643
Q ss_pred CeEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccce
Q 040826 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAK 212 (347)
Q Consensus 133 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~ 212 (347)
...+++|||+++ +|.+.+.. .+++..+..++.|+++||.||| +.|++||||||+||+++.++.+||+|||+++
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH---~~givHrDikp~Nill~~~~~~kl~Dfg~~~ 167 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 167 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhh---cCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEECCCCCEEEeeCcccc
Confidence 357999999976 67766632 4788999999999999999999 8899999999999999999999999999998
Q ss_pred ecCCCccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcC--------
Q 040826 213 MLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSM-------- 284 (347)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~-------- 284 (347)
.... ........++..|+|||.+.+..++.++||||||+++|+|++|+.||...... +...........
T Consensus 168 ~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~ 244 (355)
T cd07874 168 TAGT--SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-DQWNKVIEQLGTPCPEFMKK 244 (355)
T ss_pred cCCC--ccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHHh
Confidence 6532 22233456899999999999989999999999999999999999999754321 111111111100
Q ss_pred ----------CCCCcccccCCCC--------CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 285 ----------GKRPIKDFEDPRL--------NGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 285 ----------~~~~~~~~~~~~l--------~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
..........+.. ..........++.+|+.+||+.||.+|||+.|+++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 245 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred hcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 0000000000000 001111223578999999999999999999999975
No 218
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=4.3e-40 Score=289.85 Aligned_cols=259 Identities=25% Similarity=0.360 Sum_probs=195.8
Q ss_pred CcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
+|...+.||+|++|.||+|... +|..|++|.+.... ....+.+|+.++++++|||++++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 3566788999999999999964 68999999886432 234678899999999999999999999999999999999
Q ss_pred cCCCChHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcc
Q 040826 142 CAAGNLAQHLLRK--DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES 219 (347)
Q Consensus 142 ~~~gsL~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 219 (347)
++ ++|.+++... +..+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++...... .
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-~ 155 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCH---SRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIP-V 155 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEEcCCCcEEECcccceeecCCC-c
Confidence 98 4898888543 356899999999999999999999 889999999999999999999999999998765422 1
Q ss_pred ceeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCC-C----------
Q 040826 220 KVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGK-R---------- 287 (347)
Q Consensus 220 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~-~---------- 287 (347)
.......++..|+|||.+.+ ..++.++|+||||+++|+|+||+.||........ ............ .
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 234 (285)
T cd07861 156 RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQ-LFRIFRILGTPTEDVWPGVTSLPD 234 (285)
T ss_pred ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHHHhCCCChhhhhcchhhHH
Confidence 22223356889999998865 4578899999999999999999999975432211 111111110000 0
Q ss_pred ---CcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 288 ---PIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 288 ---~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
........... ........++.+++.+||+.||.+|||+.+|++
T Consensus 235 ~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 235 YKNTFPKWKKGSLR-SAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred HHhhccccCcchhH-HhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00000000000 001113357889999999999999999999975
No 219
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=3.7e-40 Score=289.85 Aligned_cols=248 Identities=25% Similarity=0.317 Sum_probs=196.0
Q ss_pred cccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC--hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCC
Q 040826 68 DWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN--TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAA 144 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 144 (347)
|...+.||+|+||.||++... ++..+++|.+..... ...+.+|+++++.++|||++++++.+...+..++++||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 344567999999999999965 577889998865432 34678899999999999999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeec
Q 040826 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD 224 (347)
Q Consensus 145 gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 224 (347)
++|..++.+....+++..+..++.|+++||.||| +.+++|+||+|+||+++.++.++++|||++...... ......
T Consensus 87 ~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~-~~~~~~ 162 (282)
T cd06643 87 GAVDAVMLELERPLTEPQIRVVCKQTLEALNYLH---ENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT-IQRRDS 162 (282)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEccCCCEEEcccccccccccc-cccccc
Confidence 9999988665667999999999999999999999 889999999999999999999999999998764321 112233
Q ss_pred ccCCCCcccccccc-----CCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCC
Q 040826 225 VRGTIGYMDPEYMT-----NAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNG 299 (347)
Q Consensus 225 ~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 299 (347)
..++..|+|||.+. +..++.++|+||||+++|+|++|+.||...... ........ ...+ ...
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~-~~~~~~~~----~~~~--~~~------ 229 (282)
T cd06643 163 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPM-RVLLKIAK----SEPP--TLA------ 229 (282)
T ss_pred ccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHH-HHHHHHhh----cCCC--CCC------
Confidence 45888999999874 345778999999999999999999998643221 11111111 1110 000
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 300 NINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 300 ~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
.+.....++.+++.+||+.||.+|||+.++++.
T Consensus 230 -~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 230 -QPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred -CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 011223579999999999999999999998753
No 220
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.4e-40 Score=299.10 Aligned_cols=253 Identities=20% Similarity=0.235 Sum_probs=196.7
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccC-----CChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKS-----NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVY 139 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 139 (347)
++|...+.||+|+||.||++... +++.||+|.+... .....+.+|..++..++|+||+.+++++.+.+..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46778889999999999999954 6889999988642 12335778899999999999999999999999999999
Q ss_pred eecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcc
Q 040826 140 EFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES 219 (347)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 219 (347)
||+++|+|.+++......+++..+..++.|++.||.||| +.+++||||||+||+++.++.++|+|||++........
T Consensus 81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH---~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 157 (331)
T cd05624 81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIH---QLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT 157 (331)
T ss_pred eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCc
Confidence 999999999999775667899999999999999999999 88999999999999999999999999999987643322
Q ss_pred ceeecccCCCCccccccccC-----CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccC
Q 040826 220 KVFTDVRGTIGYMDPEYMTN-----AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFED 294 (347)
Q Consensus 220 ~~~~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (347)
.......|+..|+|||.+.+ ..++.++|+||||+++|+|++|+.||...... +... .+........ .
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~-~~~~----~i~~~~~~~~--~- 229 (331)
T cd05624 158 VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV-ETYG----KIMNHEERFQ--F- 229 (331)
T ss_pred eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHH-HHHH----HHHcCCCccc--C-
Confidence 22333568999999998875 46788999999999999999999999743321 1111 1111110000 0
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhccCCCCC--CCCHHHHHHH
Q 040826 295 PRLNGNINRADFESILKIAVLCVAKSSKG--RPTIDVVYEE 333 (347)
Q Consensus 295 ~~l~~~~~~~~~~~l~~l~~~cl~~~p~~--Rps~~ei~~~ 333 (347)
+.... +..+++.+++.+|+..++.+ |+++++++++
T Consensus 230 p~~~~----~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 230 PSHIT----DVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred CCccc----cCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 11001 22357888999988765544 4678877654
No 221
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.6e-40 Score=297.55 Aligned_cols=235 Identities=24% Similarity=0.289 Sum_probs=186.4
Q ss_pred CeeeecCCeeEEEEEeC-CCCEEEEEEcccCC-----ChhHHHHHHH-HhhcCCCCcceeeeeEEEeCCeEEEEEeecCC
Q 040826 72 RFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN-----NTDSFSREVE-GLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAA 144 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 144 (347)
+.||+|+||.||+|... +|+.+|+|.+.... ....+..|.. +++.++||||+++++.+.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999964 68899999986432 2233445544 67889999999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeec
Q 040826 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD 224 (347)
Q Consensus 145 gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 224 (347)
++|.+.+... ..+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||++..... .......
T Consensus 81 ~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~-~~~~~~~ 155 (321)
T cd05603 81 GELFFHLQRE-RCFLEPRARFYAAEVASAIGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVE-PEETTST 155 (321)
T ss_pred CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEccCCCCccCCC-CCCcccc
Confidence 9998887543 45888999999999999999999 88999999999999999999999999999875321 1222334
Q ss_pred ccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHH
Q 040826 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRA 304 (347)
Q Consensus 225 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 304 (347)
..|+..|+|||.+.+..++.++||||||+++|+|++|..||...... . ....+...... ++..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~----~~~~i~~~~~~------------~~~~ 218 (321)
T cd05603 156 FCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVS-Q----MYDNILHKPLQ------------LPGG 218 (321)
T ss_pred ccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHH-H----HHHHHhcCCCC------------CCCC
Confidence 56899999999999889999999999999999999999999754211 1 11222111111 1112
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHH
Q 040826 305 DFESILKIAVLCVAKSSKGRPTID 328 (347)
Q Consensus 305 ~~~~l~~l~~~cl~~~p~~Rps~~ 328 (347)
...++.+++.+||+.+|.+||+..
T Consensus 219 ~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 219 KTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCHHHHHHHHHHccCCHhhcCCCC
Confidence 235789999999999999999864
No 222
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.6e-40 Score=296.86 Aligned_cols=257 Identities=25% Similarity=0.357 Sum_probs=201.7
Q ss_pred cCcccCCeeeecCCeeEEEEEeC--------CCCEEEEEEcccCCC---hhHHHHHHHHhhcC-CCCcceeeeeEEEeCC
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP--------SGQVVAIKHIYKSNN---TDSFSREVEGLSRV-RHPNLVCLFGCCVEGG 133 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~---~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 133 (347)
.+|...+.||+|+||.||++... ++..+++|.+..... ...+.+|+++++++ +||||+++++++...+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 46777889999999999999742 123689998875432 34688999999999 7999999999999988
Q ss_pred eEEEEEeecCCCChHHHhhcC---------------CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEec
Q 040826 134 EQYLVYEFCAAGNLAQHLLRK---------------DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLT 198 (347)
Q Consensus 134 ~~~lv~e~~~~gsL~~~l~~~---------------~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~ 198 (347)
..++++||+++|+|.+++... ...+++..++.++.|++.||.||| ++|++|+||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Nill~ 168 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLA---SQKCIHRDLAARNVLVT 168 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEc
Confidence 999999999999999998642 234788899999999999999999 88999999999999999
Q ss_pred CCCceEEeecccceecCCCccc-eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHH
Q 040826 199 EKLEPKLSDFGLAKMLGMEESK-VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLT 276 (347)
Q Consensus 199 ~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~ 276 (347)
.++.++|+|||+++........ ......++..|+|||.+.+..++.++||||||+++|+|++ |..||.... ..+
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-~~~--- 244 (334)
T cd05100 169 EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP-VEE--- 244 (334)
T ss_pred CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC-HHH---
Confidence 9999999999998865422111 1122234567999999999899999999999999999998 777775322 111
Q ss_pred HHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 040826 277 RKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWKNT 341 (347)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~~~ 341 (347)
....+..+... ........++.+++.+||+.+|++|||+.++++.|+++....
T Consensus 245 -~~~~~~~~~~~-----------~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 245 -LFKLLKEGHRM-----------DKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred -HHHHHHcCCCC-----------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 11111111110 111123357999999999999999999999999999997544
No 223
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=5.9e-40 Score=284.56 Aligned_cols=247 Identities=25% Similarity=0.397 Sum_probs=198.0
Q ss_pred CcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC----ChhHHHHHHHHhhcCCCCcceeeeeEEEe-CCeEEEEEe
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLVCLFGCCVE-GGEQYLVYE 140 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e 140 (347)
+|...+.||+|++|.||++... +++.+++|.+.... ..+.+.+|++++++++|+|++++++.+.. +...++++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4667789999999999999954 57889999986432 23467889999999999999999988764 446899999
Q ss_pred ecCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcc
Q 040826 141 FCAAGNLAQHLLRK-DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES 219 (347)
Q Consensus 141 ~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 219 (347)
|+++++|.+++... ...+++.++..++.|++.|+.+|| +.+++|+||+|+||+++.++.++|+|||++...... .
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH---~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~-~ 156 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLH---EKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQ-C 156 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCchhEEEecCCcEEEecccceEEeccc-C
Confidence 99999999988653 456899999999999999999999 889999999999999999999999999998865422 2
Q ss_pred ceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCC
Q 040826 220 KVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNG 299 (347)
Q Consensus 220 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 299 (347)
.......++..|+|||...+..++.++|+||||+++++|++|+.||...... .. ......+..+
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~-~~----~~~~~~~~~~----------- 220 (257)
T cd08223 157 DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMN-SL----VYRIIEGKLP----------- 220 (257)
T ss_pred CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH-HH----HHHHHhcCCC-----------
Confidence 2233446788999999999988999999999999999999999998643221 11 1111111110
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 300 NINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 300 ~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
..+.....++.+++.+||+.+|++|||+.+++++
T Consensus 221 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 221 PMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred CCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 1112333579999999999999999999999863
No 224
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=5.6e-40 Score=284.93 Aligned_cols=237 Identities=25% Similarity=0.386 Sum_probs=188.7
Q ss_pred CeeeecCCeeEEEEEeCC-C----------CEEEEEEcccCCC-hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEE
Q 040826 72 RFLGRGSAGLVYKGVLPS-G----------QVVAIKHIYKSNN-TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVY 139 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~~-~----------~~vavK~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 139 (347)
+.||+|+||.||+|...+ + ..+++|.+..... ...+.+|+.+++.++|||++++++++.. ...++|+
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~ 79 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE 79 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence 359999999999999653 3 2578887765443 5678899999999999999999999887 7789999
Q ss_pred eecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCC-------ceEEeecccce
Q 040826 140 EFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKL-------EPKLSDFGLAK 212 (347)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~-------~~kl~dfg~~~ 212 (347)
||+++|+|.+++......+++..+..++.|++.||.||| +.+++|+||||+||+++.++ .++++|||++.
T Consensus 80 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~ 156 (259)
T cd05037 80 EYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLE---DKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPI 156 (259)
T ss_pred EcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---hCCeecccCccceEEEecCccccCCceeEEeCCCCccc
Confidence 999999999999776657899999999999999999999 88999999999999999887 79999999988
Q ss_pred ecCCCccceeecccCCCCccccccccCC--ccCCcccHHHHHHHHHHHHhC-CCCcCCChhhhhHHHHHHhhhcCCCCCc
Q 040826 213 MLGMEESKVFTDVRGTIGYMDPEYMTNA--KLTCASDIYSFGIVALQLLSG-QKVIELDFDARDQLTRKARDVSMGKRPI 289 (347)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~il~~lltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (347)
.... .....++..|+|||.+.+. .++.++|+||||+++|+|++| ..|+..... ......+ . .....+
T Consensus 157 ~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~-~~~~~~~-~--~~~~~~- 226 (259)
T cd05037 157 TVLS-----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS-SEKERFY-Q--DQHRLP- 226 (259)
T ss_pred cccc-----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCc-hhHHHHH-h--cCCCCC-
Confidence 6532 2233467789999999876 788999999999999999995 555543221 1111111 1 000000
Q ss_pred ccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 040826 290 KDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEID 335 (347)
Q Consensus 290 ~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~ 335 (347)
. .....+.+++.+||..+|++|||+.+|++.|+
T Consensus 227 ----~---------~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 227 ----M---------PDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred ----C---------CCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0 01167999999999999999999999998873
No 225
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=3.1e-40 Score=290.77 Aligned_cols=245 Identities=24% Similarity=0.304 Sum_probs=196.7
Q ss_pred cccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC-----hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 68 DWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN-----TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
|...+.||+|+||.||++... +++.+|+|.+..... ...+.+|+.++++++|++++++++.+.+.+..+++|||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 455678999999999999954 788999998865321 23467899999999999999999999999999999999
Q ss_pred cCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccc
Q 040826 142 CAAGNLAQHLLRK-DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220 (347)
Q Consensus 142 ~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 220 (347)
+++++|.+++... ...+++..+..++.|++.||.||| +.+++|+||||+||++++++.++|+|||++...... .
T Consensus 82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~--~ 156 (285)
T cd05630 82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLH---QERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG--Q 156 (285)
T ss_pred cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCC--c
Confidence 9999999988543 345899999999999999999999 889999999999999999999999999998764322 1
Q ss_pred eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhh--hHHHHHHhhhcCCCCCcccccCCCCC
Q 040826 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDAR--DQLTRKARDVSMGKRPIKDFEDPRLN 298 (347)
Q Consensus 221 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~ 298 (347)
......|+..|+|||.+.+..++.++|+||+|+++|+|++|+.||....... ............
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~-------------- 222 (285)
T cd05630 157 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQE-------------- 222 (285)
T ss_pred cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhh--------------
Confidence 2233468999999999998899999999999999999999999997532211 111111111100
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHH
Q 040826 299 GNINRADFESILKIAVLCVAKSSKGRPT-----IDVVYE 332 (347)
Q Consensus 299 ~~~~~~~~~~l~~l~~~cl~~~p~~Rps-----~~ei~~ 332 (347)
........++.+|+.+||+.||++||| +.|+++
T Consensus 223 -~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 223 -EYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred -hcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 011122356899999999999999999 788876
No 226
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=2.4e-40 Score=297.64 Aligned_cols=253 Identities=22% Similarity=0.252 Sum_probs=196.1
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccC-----CChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKS-----NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVY 139 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 139 (347)
++|...+.||+|+||.||++... +++.+|+|.+... .....+..|..++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 35777889999999999999965 5788999988642 22335778999999999999999999999999999999
Q ss_pred eecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcc
Q 040826 140 EFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES 219 (347)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 219 (347)
||+++|+|.+++.+....+++..+..++.|++.||.||| +.+++||||||+||+++.++.++|+|||++........
T Consensus 81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH---~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~ 157 (332)
T cd05623 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 157 (332)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEeecchheecccCCc
Confidence 999999999999776667899999999999999999999 88999999999999999999999999999876533323
Q ss_pred ceeecccCCCCcccccccc-----CCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccC
Q 040826 220 KVFTDVRGTIGYMDPEYMT-----NAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFED 294 (347)
Q Consensus 220 ~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (347)
.......||..|+|||++. ...++.++||||||+++|+|++|+.||...... ..... +....... ..
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~-~~~~~----i~~~~~~~---~~ 229 (332)
T cd05623 158 VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLV-ETYGK----IMNHKERF---QF 229 (332)
T ss_pred ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHH-HHHHH----HhCCCccc---cC
Confidence 2333456899999999886 346788999999999999999999999743221 11111 11111100 00
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhccCCC--CCCCCHHHHHHH
Q 040826 295 PRLNGNINRADFESILKIAVLCVAKSS--KGRPTIDVVYEE 333 (347)
Q Consensus 295 ~~l~~~~~~~~~~~l~~l~~~cl~~~p--~~Rps~~ei~~~ 333 (347)
|... .....++.+|+.+|+..++ ..|+++.+++++
T Consensus 230 p~~~----~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 230 PAQV----TDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred CCcc----ccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 1101 1223568888888775544 447899998876
No 227
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=4.2e-40 Score=285.35 Aligned_cols=247 Identities=26% Similarity=0.393 Sum_probs=200.1
Q ss_pred CcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccC----CChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 67 NDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKS----NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
+|...+.||+|+||.+|++.. .+|+.+++|.+... .....+.+|+..+++++|||++++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 466778999999999999994 46889999988643 2234688999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccc
Q 040826 142 CAAGNLAQHLLRK-DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220 (347)
Q Consensus 142 ~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 220 (347)
+++++|.+++... ...+++..+++++.|++.|+.||| +.+++|+||+|+||+++.++.++++|||.+....... .
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~-~ 156 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV-E 156 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch-h
Confidence 9999999988653 345889999999999999999999 7899999999999999999999999999988654221 1
Q ss_pred eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCC
Q 040826 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGN 300 (347)
Q Consensus 221 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 300 (347)
......++..|+|||...+..++.++|+||||+++++|++|+.|+...... + .......+..+ .
T Consensus 157 ~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~-~----~~~~~~~~~~~-----------~ 220 (256)
T cd08218 157 LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMK-N----LVLKIIRGSYP-----------P 220 (256)
T ss_pred hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHH-H----HHHHHhcCCCC-----------C
Confidence 122345788999999999888999999999999999999999998743221 1 11122122111 1
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 301 INRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 301 ~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
.+.....++.+++.+||+.+|++||++.+|++.
T Consensus 221 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 221 VSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred CcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 112234579999999999999999999999863
No 228
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=4.1e-40 Score=287.56 Aligned_cols=245 Identities=29% Similarity=0.455 Sum_probs=193.8
Q ss_pred eeeecCCeeEEEEEeCC-------CCEEEEEEcccCC---ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeec
Q 040826 73 FLGRGSAGLVYKGVLPS-------GQVVAIKHIYKSN---NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFC 142 (347)
Q Consensus 73 ~lg~G~~g~V~~~~~~~-------~~~vavK~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 142 (347)
.||+|+||.||+|...+ +..+++|.+.... ....+.+|+..++.++||||+++++++......+++|||+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM 81 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence 59999999999998532 2578999886543 3457889999999999999999999999888999999999
Q ss_pred CCCChHHHhhcC------CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCC-----ceEEeecccc
Q 040826 143 AAGNLAQHLLRK------DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKL-----EPKLSDFGLA 211 (347)
Q Consensus 143 ~~gsL~~~l~~~------~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~-----~~kl~dfg~~ 211 (347)
++++|.+++... ...+++..++.++.|++.|+.||| +.+++|+||+|+||+++.++ .++++|||++
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~ 158 (269)
T cd05044 82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLE---QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA 158 (269)
T ss_pred CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHH---hCCcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence 999999998642 234788999999999999999999 78999999999999999887 8999999998
Q ss_pred eecCCCccc-eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCc
Q 040826 212 KMLGMEESK-VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPI 289 (347)
Q Consensus 212 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (347)
......... ......++..|+|||.+.+..++.++||||||+++|+|++ |..||...... + ....+..+...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~-~----~~~~~~~~~~~- 232 (269)
T cd05044 159 RDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ-E----VLQHVTAGGRL- 232 (269)
T ss_pred cccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH-H----HHHHHhcCCcc-
Confidence 765322111 1122345678999999998899999999999999999998 88888633221 1 11111111110
Q ss_pred ccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 040826 290 KDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDK 336 (347)
Q Consensus 290 ~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~ 336 (347)
......+..+.+++.+||+.+|.+||++.+|++.|++
T Consensus 233 ----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 233 ----------QKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred ----------CCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 1112234678999999999999999999999998863
No 229
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=5.8e-40 Score=287.55 Aligned_cols=252 Identities=24% Similarity=0.400 Sum_probs=199.7
Q ss_pred cCcccCCeeeecCCeeEEEEEeC------CCCEEEEEEcccCCCh---hHHHHHHHHhhcCCCCcceeeeeEEEeCCeEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP------SGQVVAIKHIYKSNNT---DSFSREVEGLSRVRHPNLVCLFGCCVEGGEQY 136 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~---~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 136 (347)
++|...+.||+|+||.||+|... +...+++|.+...... ..+.+|++++++++|+|++++++++.+....+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 45677788999999999999953 2457999988665443 56889999999999999999999999888999
Q ss_pred EEEeecCCCChHHHhhcCC--------CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeec
Q 040826 137 LVYEFCAAGNLAQHLLRKD--------SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDF 208 (347)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~--------~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~df 208 (347)
+||||+++++|.+++.... ..+++..+..++.|++.||.||| +.+++|+||||+||+++.++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLS---NARFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhh---hcCcccCcCccceEEEeCCCcEEEccc
Confidence 9999999999999986433 25899999999999999999999 889999999999999999999999999
Q ss_pred ccceecCCCccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCC
Q 040826 209 GLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKR 287 (347)
Q Consensus 209 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 287 (347)
|.+...............++..|+|||.+.+..++.++||||||+++|+|++ |..||..... .... .....+..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~-~~~~----~~~~~~~~ 236 (275)
T cd05046 162 SLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD-EEVL----NRLQAGKL 236 (275)
T ss_pred ccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch-HHHH----HHHHcCCc
Confidence 9887543222223333456778999999988888999999999999999999 6777753221 1111 11111111
Q ss_pred CcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 040826 288 PIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEID 335 (347)
Q Consensus 288 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~ 335 (347)
.. .........+.+++.+||+.+|.+|||+.++++.|+
T Consensus 237 ~~----------~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 237 EL----------PVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CC----------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 00 011123357999999999999999999999999875
No 230
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=3.6e-40 Score=289.64 Aligned_cols=251 Identities=26% Similarity=0.337 Sum_probs=200.7
Q ss_pred hcCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC--hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN--TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
.++|...+.||.|++|.||++... ++..+++|.+..... ...+.+|+.++++++|||++++++.+..+...++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 456777788999999999999964 688999998865432 34688899999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccce
Q 040826 142 CAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKV 221 (347)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 221 (347)
+++++|.+++...+..+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.++|+|||++...... ...
T Consensus 84 ~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~-~~~ 159 (280)
T cd06611 84 CDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLH---SHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKST-LQK 159 (280)
T ss_pred cCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEECCCCCEEEccCccchhhccc-ccc
Confidence 9999999998776667999999999999999999999 889999999999999999999999999988754322 112
Q ss_pred eecccCCCCcccccccc-----CCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCC
Q 040826 222 FTDVRGTIGYMDPEYMT-----NAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPR 296 (347)
Q Consensus 222 ~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (347)
.....++..|+|||.+. +..++.++|+||||+++|+|++|+.||...... ..... ...+..+ .+.
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~-~~~~~----~~~~~~~--~~~--- 229 (280)
T cd06611 160 RDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM-RVLLK----ILKSEPP--TLD--- 229 (280)
T ss_pred cceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH-HHHHH----HhcCCCC--CcC---
Confidence 23345788999999875 345778999999999999999999998643221 11111 1111111 000
Q ss_pred CCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 297 LNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 297 l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
.+.....++.+++.+||+.+|.+|||+.++++.
T Consensus 230 ----~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 230 ----QPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred ----CcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 111233578899999999999999999999875
No 231
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.8e-40 Score=301.06 Aligned_cols=260 Identities=22% Similarity=0.304 Sum_probs=196.7
Q ss_pred HhcCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC----ChhHHHHHHHHhhcCCCCcceeeeeEEEeC------
Q 040826 64 AINNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLVCLFGCCVEG------ 132 (347)
Q Consensus 64 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------ 132 (347)
..++|...+.||+|+||.||++... +++.||+|.+.... ....+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 3578888999999999999999954 68899999986532 234677899999999999999999987543
Q ss_pred CeEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccce
Q 040826 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAK 212 (347)
Q Consensus 133 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~ 212 (347)
...++||||+++ +|.+.+.. .+++..+..++.|++.||.||| ++|++||||||+||+++.++.++|+|||++.
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 174 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHHh---cCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEECCCCcEEEEeCCCcc
Confidence 357999999976 77776643 3788899999999999999999 8899999999999999999999999999998
Q ss_pred ecCCCccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcC--------
Q 040826 213 MLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSM-------- 284 (347)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~-------- 284 (347)
..... .......++..|+|||++.+..++.++||||||+++|+|++|+.||...... +...........
T Consensus 175 ~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~ 251 (364)
T cd07875 175 TAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI-DQWNKVIEQLGTPCPEFMKK 251 (364)
T ss_pred ccCCC--CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCHHHHHh
Confidence 65321 2223456899999999999999999999999999999999999999753221 111111111100
Q ss_pred ----------CCCCccccc----CCCC----CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 285 ----------GKRPIKDFE----DPRL----NGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 285 ----------~~~~~~~~~----~~~l----~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
......... .+.. ..........++.+|+.+||+.||.+|||+.++++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 252 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred hhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000000 0000 001111223578999999999999999999999874
No 232
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.1e-39 Score=284.52 Aligned_cols=245 Identities=25% Similarity=0.399 Sum_probs=196.5
Q ss_pred cccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCCCh-----------hHHHHHHHHhhcCCCCcceeeeeEEEeCCeE
Q 040826 68 DWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNNT-----------DSFSREVEGLSRVRHPNLVCLFGCCVEGGEQ 135 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-----------~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 135 (347)
|.....||+|++|.||+|.. .+++.+++|.+...... ..+.+|+.++++++||||+++++++...+..
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL 81 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence 45667899999999999985 46889999988653211 3577899999999999999999999999999
Q ss_pred EEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecC
Q 040826 136 YLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLG 215 (347)
Q Consensus 136 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 215 (347)
++++||+++++|.+++... ..+++..+..++.|++.|++||| +.+++|+||+|+||++++++.++|+|||.+....
T Consensus 82 ~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lH---~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06628 82 NIFLEYVPGGSVAALLNNY-GAFEETLVRNFVRQILKGLNYLH---NRGIIHRDIKGANILVDNKGGIKISDFGISKKLE 157 (267)
T ss_pred EEEEEecCCCCHHHHHHhc-cCccHHHHHHHHHHHHHHHHHHH---hcCcccccCCHHHEEEcCCCCEEecccCCCcccc
Confidence 9999999999999998654 45888999999999999999999 7899999999999999999999999999988664
Q ss_pred CCcc-----ceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcc
Q 040826 216 MEES-----KVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIK 290 (347)
Q Consensus 216 ~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (347)
.... .......++..|+|||.+.+..++.++|+||||+++|+|++|+.||...... ..... .....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~----~~~~~---- 228 (267)
T cd06628 158 ANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL-QAIFK----IGENA---- 228 (267)
T ss_pred cccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH-HHHHH----HhccC----
Confidence 2111 1112235788999999999888999999999999999999999999743221 11111 11111
Q ss_pred cccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 291 DFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 291 ~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
.+ ..+....+.+.+++.+||+.+|.+||++.+|++
T Consensus 229 ---~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 229 ---SP----EIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred ---CC----cCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 11 111233467999999999999999999999986
No 233
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=7.4e-40 Score=286.76 Aligned_cols=245 Identities=30% Similarity=0.433 Sum_probs=199.4
Q ss_pred CcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC---ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeec
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN---NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFC 142 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 142 (347)
+|...+.||.|++|.||+|... +++.+++|.+.... ....+.+|+++++.++|+|++++++++.++...++++||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence 5667788999999999999954 68899999886543 2346788999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcccee
Q 040826 143 AAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVF 222 (347)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 222 (347)
++++|.+++... .+++..+..++.|++.|+.||| +.+++|+||+|+||++++++.++++|||++....... ...
T Consensus 82 ~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-~~~ 155 (274)
T cd06609 82 GGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLH---EEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM-SKR 155 (274)
T ss_pred CCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEcccccceeecccc-ccc
Confidence 999999998654 6899999999999999999999 8899999999999999999999999999998764321 222
Q ss_pred ecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCC
Q 040826 223 TDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNIN 302 (347)
Q Consensus 223 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 302 (347)
....++..|+|||.+.+..++.++|+||||+++|+|++|..||...... . ....+..... +.+...
T Consensus 156 ~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~-~----~~~~~~~~~~-------~~~~~~-- 221 (274)
T cd06609 156 NTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM-R----VLFLIPKNNP-------PSLEGN-- 221 (274)
T ss_pred ccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH-H----HHHHhhhcCC-------CCCccc--
Confidence 3346788899999999888999999999999999999999998643321 1 1111111110 111111
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 303 RADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 303 ~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
...+++.+++.+||..+|++|||++++++
T Consensus 222 -~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 222 -KFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred -ccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 13357899999999999999999999976
No 234
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=1.1e-39 Score=284.81 Aligned_cols=248 Identities=25% Similarity=0.347 Sum_probs=186.1
Q ss_pred eeeecCCeeEEEEEeCC---CCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCCCC
Q 040826 73 FLGRGSAGLVYKGVLPS---GQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGN 146 (347)
Q Consensus 73 ~lg~G~~g~V~~~~~~~---~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs 146 (347)
.||+|+||.||+|...+ ...+++|.+..... ...+.+|+..++.++|+||+++++.+......++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 59999999999997433 34788887764432 2357889999999999999999999999999999999999999
Q ss_pred hHHHhhcCC----CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccc-e
Q 040826 147 LAQHLLRKD----SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK-V 221 (347)
Q Consensus 147 L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~-~ 221 (347)
|.+++.... ...++...+.++.|++.|++||| +.+++||||||+||++++++.++|+|||++......... .
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLH---QADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT 158 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHH---hcCEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence 999986532 23467788899999999999999 889999999999999999999999999998653222111 1
Q ss_pred eecccCCCCccccccccC-------CccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCccccc
Q 040826 222 FTDVRGTIGYMDPEYMTN-------AKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFE 293 (347)
Q Consensus 222 ~~~~~~~~~y~aPE~~~~-------~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (347)
.....++..|+|||++.. ..++.++||||||+++|+|++ |..||..... .+.+...... ... ...
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-~~~~~~~~~~---~~~---~~~ 231 (269)
T cd05042 159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSD-EQVLKQVVRE---QDI---KLP 231 (269)
T ss_pred cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCH-HHHHHHHhhc---cCc---cCC
Confidence 122345678999998742 356789999999999999999 6667653322 1212211111 111 111
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 040826 294 DPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEID 335 (347)
Q Consensus 294 ~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~ 335 (347)
.+.+. ......+.+++..|| .||++|||+++|++.|.
T Consensus 232 ~~~~~----~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 232 KPQLD----LKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CCccc----ccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 12222 223356778888898 59999999999999873
No 235
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-40 Score=283.30 Aligned_cols=267 Identities=24% Similarity=0.286 Sum_probs=203.5
Q ss_pred HhcCcccCCeeeecCCeeEEEEEeCCCCEEEEEEcccCCChhHHHHHHHHhhc--CCCCcceeeeeEEEeC----CeEEE
Q 040826 64 AINNDWDRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSR--VRHPNLVCLFGCCVEG----GEQYL 137 (347)
Q Consensus 64 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~----~~~~l 137 (347)
+..+....+.||+|.||.||+|.| -|+.||||++.. .+++.+.+|.++... |+|+||+.+++.-..+ ...+|
T Consensus 209 iarqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~s-rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwL 286 (513)
T KOG2052|consen 209 IARQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSS-RDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWL 286 (513)
T ss_pred hhheeEEEEEecCccccceeeccc-cCCceEEEEecc-cchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEE
Confidence 355666778899999999999999 588999998854 445567777777665 4999999999875433 26799
Q ss_pred EEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhcc-----CCCceeCCCCCCCEEecCCCceEEeecccce
Q 040826 138 VYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYI-----DGCIVHRDIKLTNILLTEKLEPKLSDFGLAK 212 (347)
Q Consensus 138 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~-----~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~ 212 (347)
|++|.+.|||.|||.. ..++....++++..+|.||++||... ...|.|||||++|||+..++...|+|+|+|.
T Consensus 287 vTdYHe~GSL~DyL~r--~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv 364 (513)
T KOG2052|consen 287 VTDYHEHGSLYDYLNR--NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 364 (513)
T ss_pred eeecccCCcHHHHHhh--ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeE
Confidence 9999999999999955 56899999999999999999999653 4579999999999999999999999999998
Q ss_pred ecCCCcc---ceeecccCCCCccccccccCC----ccC--CcccHHHHHHHHHHHHhC----------CCCcCCChhhhh
Q 040826 213 MLGMEES---KVFTDVRGTIGYMDPEYMTNA----KLT--CASDIYSFGIVALQLLSG----------QKVIELDFDARD 273 (347)
Q Consensus 213 ~~~~~~~---~~~~~~~~~~~y~aPE~~~~~----~~~--~~~Dv~slG~il~~lltg----------~~p~~~~~~~~~ 273 (347)
....... ...+..+||.+|||||++... .+. ..+||||||.++||+... +.||..--+.+.
T Consensus 365 ~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DP 444 (513)
T KOG2052|consen 365 RHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDP 444 (513)
T ss_pred EecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCC
Confidence 7653322 224556899999999998642 121 368999999999999753 355543222222
Q ss_pred HHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 040826 274 QLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWK 339 (347)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~ 339 (347)
+.+.. ++...-. .+....+++ ..+.+.+..+.++|..||..||.-|.|+--|-+.|.++.+
T Consensus 445 s~eeM-rkVVCv~-~~RP~ipnr---W~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 445 SFEEM-RKVVCVQ-KLRPNIPNR---WKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred CHHHH-hcceeec-ccCCCCCcc---cccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 22322 2222211 111122222 3345778899999999999999999999999999999963
No 236
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=7.3e-40 Score=285.66 Aligned_cols=250 Identities=26% Similarity=0.336 Sum_probs=196.5
Q ss_pred cCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCCC--hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeec
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNN--TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFC 142 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 142 (347)
++|...+.||+|+||.||+|.. .+++.+++|.+..... ...+.+|+.+++.++|||++++++.+...+..++++||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 3556667899999999999995 4688999998865432 345778999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcccee
Q 040826 143 AAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVF 222 (347)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 222 (347)
++++|.+++... ..+++..++.++.|++.|+.||| +.|++|+||+|+||+++.++.++|+|||++...... ....
T Consensus 89 ~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~-~~~~ 163 (267)
T cd06645 89 GGGSLQDIYHVT-GPLSESQIAYVSRETLQGLYYLH---SKGKMHRDIKGANILLTDNGHVKLADFGVSAQITAT-IAKR 163 (267)
T ss_pred CCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECcceeeeEccCc-cccc
Confidence 999999988654 35899999999999999999999 789999999999999999999999999998765322 2223
Q ss_pred ecccCCCCcccccccc---CCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCC
Q 040826 223 TDVRGTIGYMDPEYMT---NAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNG 299 (347)
Q Consensus 223 ~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 299 (347)
....|+..|+|||.+. ...++.++|+||||+++|+|++|..|+......... ...... ... .+....
T Consensus 164 ~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~-~~~~~~----~~~-----~~~~~~ 233 (267)
T cd06645 164 KSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL-FLMTKS----NFQ-----PPKLKD 233 (267)
T ss_pred ccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhH-Hhhhcc----CCC-----CCcccc
Confidence 3456889999999874 456888999999999999999999998643221111 111110 000 011100
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 300 NINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 300 ~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
. ....+.+.+++.+||+.+|++|||+.+|++
T Consensus 234 ~--~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 234 K--MKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred c--CCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 0 012356889999999999999999999875
No 237
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.7e-40 Score=288.33 Aligned_cols=239 Identities=24% Similarity=0.421 Sum_probs=187.0
Q ss_pred CeeeecCCeeEEEEEeCC-C-------CEEEEEEcccCCC--hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 72 RFLGRGSAGLVYKGVLPS-G-------QVVAIKHIYKSNN--TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~~-~-------~~vavK~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
+.||+|+||.||+|.... + ..+++|.+..... .+.+..|..+++.++|||++++++++..++..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 359999999999998532 2 3478887754322 34678899999999999999999999998899999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCc--------eEEeeccccee
Q 040826 142 CAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLE--------PKLSDFGLAKM 213 (347)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~--------~kl~dfg~~~~ 213 (347)
+++|+|.+++......+++..+..++.|++.|+.||| +.+++||||||+||+++.++. ++++|||.+..
T Consensus 81 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~ 157 (258)
T cd05078 81 VKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLE---DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISIT 157 (258)
T ss_pred CCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEEecccccccCCCceEEecccccccc
Confidence 9999999999776667899999999999999999999 889999999999999987765 69999998765
Q ss_pred cCCCccceeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccc
Q 040826 214 LGMEESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDF 292 (347)
Q Consensus 214 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (347)
... .....++..|+|||++.+ ..++.++|+||||+++|+|++|..++........... ... ....
T Consensus 158 ~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~-~~~----~~~~---- 223 (258)
T cd05078 158 VLP-----KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQ-FYE----DRHQ---- 223 (258)
T ss_pred cCC-----chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHH-HHH----cccc----
Confidence 432 122457888999999986 4578999999999999999999644332221111111 111 0111
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 040826 293 EDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEID 335 (347)
Q Consensus 293 ~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~ 335 (347)
++.....++.+++.+||+.+|++|||+++|++.|+
T Consensus 224 --------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 224 --------LPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred --------CCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 11112256899999999999999999999998863
No 238
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-42 Score=282.77 Aligned_cols=259 Identities=26% Similarity=0.357 Sum_probs=217.5
Q ss_pred cccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCCCC
Q 040826 68 DWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGN 146 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs 146 (347)
|+...+||+|+||+||++... +|+.+|+|.+.-+.+-+++..|+.+|.++..|++|++||.|.....+++|||||-.|+
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGS 114 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGS 114 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCc
Confidence 344567999999999999954 7999999999989999999999999999999999999999999999999999999999
Q ss_pred hHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeeccc
Q 040826 147 LAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVR 226 (347)
Q Consensus 147 L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 226 (347)
..|.++....++++.++..+++..+.||+||| ...-+|||||..|||++.+|..||+|||++..+... -...+...
T Consensus 115 iSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH---~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDT-MAKRNTVI 190 (502)
T KOG0574|consen 115 ISDIMRARRKPLSEQEISAVLRDTLKGLQYLH---DLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDT-MAKRNTVI 190 (502)
T ss_pred HHHHHHHhcCCccHHHHHHHHHHHHhHHHHHH---HHHHHHhhcccccEEEcccchhhhhhccccchhhhh-HHhhCccc
Confidence 99999888889999999999999999999999 556799999999999999999999999999876422 22345678
Q ss_pred CCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcC-CCCCcccccCCCCCCCCCHHH
Q 040826 227 GTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSM-GKRPIKDFEDPRLNGNINRAD 305 (347)
Q Consensus 227 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~ 305 (347)
||+.|||||++..-.|+.++||||||++..||..|++|+..-.+. +.+.. .-.+.+.|.. +...
T Consensus 191 GTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPM--------RAIFMIPT~PPPTF~K-------PE~W 255 (502)
T KOG0574|consen 191 GTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPM--------RAIFMIPTKPPPTFKK-------PEEW 255 (502)
T ss_pred cCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccc--------ceeEeccCCCCCCCCC-------hHhh
Confidence 999999999999999999999999999999999999998743222 11211 1112222332 3345
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHH-----------HHHHHHhhhhhh
Q 040826 306 FESILKIAVLCVAKSSKGRPTIDVVYEE-----------IDKAWKNTMVEM 345 (347)
Q Consensus 306 ~~~l~~l~~~cl~~~p~~Rps~~ei~~~-----------l~~~~~~~~~~~ 345 (347)
..++.+++.+||-++|++|.|+.+++++ ++.++++.+-..
T Consensus 256 S~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~g~~I~~~~I~~A~e~~ 306 (502)
T KOG0574|consen 256 SSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAPGCDIMQLMIQDAQEKA 306 (502)
T ss_pred hhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCCcccHHHHHHHHHHHHH
Confidence 6789999999999999999999999864 566666655443
No 239
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.1e-39 Score=288.78 Aligned_cols=247 Identities=25% Similarity=0.385 Sum_probs=200.0
Q ss_pred cCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC--ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeec
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN--NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFC 142 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 142 (347)
.+|...+.||.|++|.||+|.. .+|+.|++|.+.... ....+.+|+..++.++|||++++++.+......++|+||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 4577788999999999999984 578999999886533 3456788999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcccee
Q 040826 143 AAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVF 222 (347)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 222 (347)
++++|.+++.. ..+++.++..++.|++.|+.||| +.|++|+||+|+||+++.++.++|+|||++........ ..
T Consensus 99 ~~~~L~~~~~~--~~l~~~~~~~i~~~l~~al~~LH---~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~-~~ 172 (296)
T cd06655 99 AGGSLTDVVTE--TCMDEAQIAAVCRECLQALEFLH---ANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS-KR 172 (296)
T ss_pred CCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccchhcccccc-cC
Confidence 99999998854 35899999999999999999999 88999999999999999999999999998876532221 12
Q ss_pred ecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCC
Q 040826 223 TDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNIN 302 (347)
Q Consensus 223 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 302 (347)
....++..|+|||.+.+..++.++|+||||+++|+|++|+.||......... ...... .... . ...
T Consensus 173 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~-~~~~~~---~~~~---~-------~~~ 238 (296)
T cd06655 173 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL-YLIATN---GTPE---L-------QNP 238 (296)
T ss_pred CCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHhc---CCcc---c-------CCc
Confidence 2346788999999999888999999999999999999999999765432221 111111 1100 0 011
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 303 RADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 303 ~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
......+.+++.+||..+|.+|||+.+|++
T Consensus 239 ~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 239 EKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred ccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 122356889999999999999999999985
No 240
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.3e-39 Score=286.88 Aligned_cols=249 Identities=24% Similarity=0.358 Sum_probs=197.8
Q ss_pred CcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeec
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFC 142 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 142 (347)
+|...+.||+|+||.||++... +|..+|+|.+..... ...+.+|+.++++++|+||+++++.+...+..++|+||+
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence 5667788999999999999965 789999998865422 346888999999999999999999999999999999999
Q ss_pred CCCChHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccc
Q 040826 143 AAGNLAQHLLRK--DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220 (347)
Q Consensus 143 ~~gsL~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 220 (347)
++++|..++... ...+++..+..++.|++.|+.|||+ +.+++|+||+|+||+++.++.++|+|||.+......
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~--- 156 (286)
T cd06622 82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE--EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS--- 156 (286)
T ss_pred CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh--cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC---
Confidence 999999888653 2368999999999999999999994 358999999999999999999999999998765321
Q ss_pred eeecccCCCCccccccccCC------ccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccC
Q 040826 221 VFTDVRGTIGYMDPEYMTNA------KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFED 294 (347)
Q Consensus 221 ~~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (347)
......++..|+|||.+.+. .++.++|+||||+++|+|++|..||....... .......+..+..+
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~------ 228 (286)
T cd06622 157 LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN--IFAQLSAIVDGDPP------ 228 (286)
T ss_pred ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh--HHHHHHHHhhcCCC------
Confidence 12234578899999988543 35789999999999999999999986432211 11111222111111
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 295 PRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 295 ~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
........++.+++.+||+.+|.+||++.+++..
T Consensus 229 -----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 229 -----TLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred -----CCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 1122344678999999999999999999999873
No 241
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9.3e-40 Score=300.09 Aligned_cols=261 Identities=21% Similarity=0.201 Sum_probs=199.3
Q ss_pred hcCcccCCeeeecCCeeEEEEEeC---CCCEEEEEEcccCCChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVLP---SGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
..+|...+.||+|+||.||++... ++..|++|.+... ....+|+.++++++||||+++++++......+++||+
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~---~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~ 167 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG---KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPK 167 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc---ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehh
Confidence 456888999999999999999743 4578999988653 2345899999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcc-c
Q 040826 142 CAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES-K 220 (347)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~-~ 220 (347)
+.+ +|.+++. ....+++..++.++.|++.||.||| +.|++||||||+|||++.++.++|+|||++........ .
T Consensus 168 ~~~-~l~~~l~-~~~~l~~~~~~~i~~ql~~aL~~LH---~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~ 242 (392)
T PHA03207 168 YKC-DLFTYVD-RSGPLPLEQAITIQRRLLEALAYLH---GRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTP 242 (392)
T ss_pred cCC-CHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEccCccccccCcccccc
Confidence 965 8888883 3456899999999999999999999 88999999999999999999999999999876543222 1
Q ss_pred eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhh--hhHHHHHHhhhcCCCCCcccc------
Q 040826 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDA--RDQLTRKARDVSMGKRPIKDF------ 292 (347)
Q Consensus 221 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~------ 292 (347)
......||..|+|||++.+..++.++|||||||++|+|++|+.||...... ...+....+............
T Consensus 243 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~ 322 (392)
T PHA03207 243 QCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLC 322 (392)
T ss_pred cccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHH
Confidence 223456899999999999999999999999999999999999999654321 222222222211111000000
Q ss_pred ---------cCCCCC--CCC-CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 293 ---------EDPRLN--GNI-NRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 293 ---------~~~~l~--~~~-~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
..+... ..+ ......++.+++.+||..||++|||+.|++..
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 323 KHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred HHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000000 000 01123568889999999999999999999864
No 242
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=4.5e-40 Score=288.61 Aligned_cols=243 Identities=28% Similarity=0.388 Sum_probs=195.8
Q ss_pred cccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecC
Q 040826 68 DWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCA 143 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 143 (347)
|...+.||+|+||.||+|... ++..||+|.+..... ...+.+|+..+++++|||++++++++...+..++|+||++
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG 85 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence 344567999999999999854 678899998864432 3468899999999999999999999999999999999999
Q ss_pred CCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceee
Q 040826 144 AGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT 223 (347)
Q Consensus 144 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 223 (347)
+++|.+++.. ..+++..+..++.|+++|+.||| +++++|+||+|+||++++++.++++|||++....... ....
T Consensus 86 ~~~L~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~-~~~~ 159 (277)
T cd06642 86 GGSALDLLKP--GPLEETYIATILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-IKRN 159 (277)
T ss_pred CCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHh---cCCeeccCCChheEEEeCCCCEEEccccccccccCcc-hhhh
Confidence 9999998843 45889999999999999999999 8899999999999999999999999999987654221 1122
Q ss_pred cccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCH
Q 040826 224 DVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINR 303 (347)
Q Consensus 224 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 303 (347)
...++..|+|||.+.+..++.++|+||||+++|+|++|+.|+........ ........ .+. ...
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-----~~~~~~~~-------~~~----~~~ 223 (277)
T cd06642 160 TFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV-----LFLIPKNS-------PPT----LEG 223 (277)
T ss_pred cccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH-----HhhhhcCC-------CCC----CCc
Confidence 34578899999999988899999999999999999999999863322111 11111111 111 112
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 304 ADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 304 ~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
.....+.+++.+||+.+|++|||+.++++
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 224 QYSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred ccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 23457899999999999999999999998
No 243
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=1.2e-39 Score=284.51 Aligned_cols=250 Identities=30% Similarity=0.391 Sum_probs=197.6
Q ss_pred cccCCeeeecCCeeEEEEEeCC--CCEEEEEEcccCC------------ChhHHHHHHHHhhc-CCCCcceeeeeEEEeC
Q 040826 68 DWDRRFLGRGSAGLVYKGVLPS--GQVVAIKHIYKSN------------NTDSFSREVEGLSR-VRHPNLVCLFGCCVEG 132 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~~------------~~~~~~~e~~~l~~-l~h~niv~~~~~~~~~ 132 (347)
|...+.||+|+||.||+|.... ++.+++|.+.... ....+.+|+.++.+ ++|||++++++++..+
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 81 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN 81 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence 5567789999999999999654 6889999875321 11246678887764 7999999999999999
Q ss_pred CeEEEEEeecCCCChHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecc
Q 040826 133 GEQYLVYEFCAAGNLAQHLLR---KDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFG 209 (347)
Q Consensus 133 ~~~~lv~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg 209 (347)
+..+++|||+++++|.+++.. ....+++..++.++.|++.|+.|||+ ..+++|+||+|+||+++.++.++|+|||
T Consensus 82 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~--~~~i~H~dl~~~nil~~~~~~~~l~dfg 159 (269)
T cd08528 82 DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK--EKRIVHRDLTPNNIMLGEDDKVTITDFG 159 (269)
T ss_pred CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc--CCceeecCCCHHHEEECCCCcEEEeccc
Confidence 999999999999999988743 44568999999999999999999993 3689999999999999999999999999
Q ss_pred cceecCCCccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCc
Q 040826 210 LAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPI 289 (347)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (347)
.+....... ......++..|+|||.+.+..++.++|+||||+++|+|++|+.||....... .......+...
T Consensus 160 ~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~- 231 (269)
T cd08528 160 LAKQKQPES--KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLS-----LATKIVEAVYE- 231 (269)
T ss_pred ceeeccccc--ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHH-----HHHHHhhccCC-
Confidence 998754322 3344568899999999998889999999999999999999999986432211 11111111100
Q ss_pred ccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 040826 290 KDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDK 336 (347)
Q Consensus 290 ~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~ 336 (347)
+.. .......+.+++.+||+.||++|||+.|+..++++
T Consensus 232 -----~~~----~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~ 269 (269)
T cd08528 232 -----PLP----EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD 269 (269)
T ss_pred -----cCC----cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence 000 01123579999999999999999999999998763
No 244
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=2.8e-40 Score=300.16 Aligned_cols=259 Identities=24% Similarity=0.285 Sum_probs=202.4
Q ss_pred cCcccCCeeeecCCeeEEEEE-eCCCCEEEEEEcccCCC-hhHHHHHHHHhhcCC-C-----CcceeeeeEEEeCCeEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNN-TDSFSREVEGLSRVR-H-----PNLVCLFGCCVEGGEQYL 137 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~-h-----~niv~~~~~~~~~~~~~l 137 (347)
.+|...+.||+|.||+|-+|. ..+++.||||+++.... ..+...|+.+|..++ | -|+|++++++...++.||
T Consensus 186 ~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 186 YRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 367788999999999999999 56799999999987644 356678999999886 3 389999999999999999
Q ss_pred EEeecCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCC--CceEEeecccceec
Q 040826 138 VYEFCAAGNLAQHLLRK-DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEK--LEPKLSDFGLAKML 214 (347)
Q Consensus 138 v~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~--~~~kl~dfg~~~~~ 214 (347)
|+|.+.. +|.++++++ ...++...++.++.|++.||.+|| ..+|||+||||+|||+.+- ..+||+|||.+...
T Consensus 266 VfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~---~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 266 VFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLH---ELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFE 341 (586)
T ss_pred eehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCChhheeeccCCcCceeEEeccccccc
Confidence 9999977 999999764 356999999999999999999999 8999999999999999753 47999999999875
Q ss_pred CCCccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCC-------C
Q 040826 215 GMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGK-------R 287 (347)
Q Consensus 215 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~-------~ 287 (347)
... .-....+..|.|||++.|.+|+.+.|+||||||+.||++|.+.|.+. ...+++..+..-..... .
T Consensus 342 ~q~----vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~-ne~DQl~~I~e~lG~Pp~~mL~~~~ 416 (586)
T KOG0667|consen 342 SQR----VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD-NEYDQLARIIEVLGLPPPKMLDTAK 416 (586)
T ss_pred CCc----ceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC-CHHHHHHHHHHHhCCCCHHHHHhcc
Confidence 322 12556888999999999999999999999999999999997777643 33344444433322110 0
Q ss_pred Cccccc------------------------------------CC-CCC---CCCCHHHHHHHHHHHHHhccCCCCCCCCH
Q 040826 288 PIKDFE------------------------------------DP-RLN---GNINRADFESILKIAVLCVAKSSKGRPTI 327 (347)
Q Consensus 288 ~~~~~~------------------------------------~~-~l~---~~~~~~~~~~l~~l~~~cl~~~p~~Rps~ 327 (347)
....+. .| ... .......-..+.+++.+||..||.+|+|.
T Consensus 417 ~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp 496 (586)
T KOG0667|consen 417 KAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITP 496 (586)
T ss_pred ccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCH
Confidence 000000 01 000 00111223578999999999999999999
Q ss_pred HHHHHH
Q 040826 328 DVVYEE 333 (347)
Q Consensus 328 ~ei~~~ 333 (347)
.+++++
T Consensus 497 ~qal~H 502 (586)
T KOG0667|consen 497 AQALNH 502 (586)
T ss_pred HHHhcC
Confidence 998863
No 245
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=2.4e-39 Score=289.51 Aligned_cols=193 Identities=26% Similarity=0.395 Sum_probs=161.1
Q ss_pred CCeeeecCCeeEEEEEeC---CCCEEEEEEcccCCChhHHHHHHHHhhcCCCCcceeeeeEEEe--CCeEEEEEeecCCC
Q 040826 71 RRFLGRGSAGLVYKGVLP---SGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVE--GGEQYLVYEFCAAG 145 (347)
Q Consensus 71 ~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~~g 145 (347)
..+||+|+||.||+|... ++..+|+|.+........+.+|+.++++++||||+++++++.. +...++++||+.+
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~- 84 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH- 84 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC-
Confidence 457999999999999954 4578999998776666678899999999999999999998854 5578999999876
Q ss_pred ChHHHhhc--------CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEe----cCCCceEEeeccccee
Q 040826 146 NLAQHLLR--------KDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILL----TEKLEPKLSDFGLAKM 213 (347)
Q Consensus 146 sL~~~l~~--------~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili----~~~~~~kl~dfg~~~~ 213 (347)
+|.+++.. ....+++..+..++.|++.||.||| +.+++||||||+||++ +.++.++|+|||++..
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07867 85 DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceec
Confidence 78777642 1235888999999999999999999 8899999999999999 5667899999999987
Q ss_pred cCCCcc--ceeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCC
Q 040826 214 LGMEES--KVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIEL 267 (347)
Q Consensus 214 ~~~~~~--~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~ 267 (347)
...... .......+|..|+|||.+.+ ..++.++||||||+++|+|+||++||..
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred cCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 543221 12234567899999999876 4588999999999999999999999864
No 246
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.7e-39 Score=281.67 Aligned_cols=245 Identities=28% Similarity=0.388 Sum_probs=198.1
Q ss_pred CcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC-------ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEE
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN-------NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLV 138 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 138 (347)
+|...+.||+|++|.||+|... +++.|++|.+.... ....+.+|+..++.++|+|++++++++.++...+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 3566788999999999999965 78999999886533 234688899999999999999999999999999999
Q ss_pred EeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCc
Q 040826 139 YEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE 218 (347)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 218 (347)
+||+++++|.+++... ..+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~ 156 (258)
T cd06632 81 LELVPGGSLAKLLKKY-GSFPEPVIRLYTRQILLGLEYLH---DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS 156 (258)
T ss_pred EEecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccceeccccc
Confidence 9999999999998654 35889999999999999999999 8899999999999999999999999999988653222
Q ss_pred cceeecccCCCCccccccccCCc-cCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCC
Q 040826 219 SKVFTDVRGTIGYMDPEYMTNAK-LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRL 297 (347)
Q Consensus 219 ~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 297 (347)
......++..|++||.+.+.. ++.++|+||||+++|+|++|+.||..... ......... .... +
T Consensus 157 --~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~-~~~~~~~~~---~~~~-------~-- 221 (258)
T cd06632 157 --FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG-VAAVFKIGR---SKEL-------P-- 221 (258)
T ss_pred --cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH-HHHHHHHHh---cccC-------C--
Confidence 233456888999999987766 88999999999999999999999864431 111111111 0110 0
Q ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 298 NGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 298 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
.++....+.+.+++.+||+.+|.+|||+.++++
T Consensus 222 --~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 222 --PIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred --CcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 111122357899999999999999999999975
No 247
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4e-40 Score=283.32 Aligned_cols=248 Identities=24% Similarity=0.252 Sum_probs=198.9
Q ss_pred CcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC-----hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEe
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN-----TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYE 140 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 140 (347)
.|...+.||+|.-|+||++... ++...|+|++.+..- ......|-++|..+.||-+..+|..++.+...|++||
T Consensus 78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~me 157 (459)
T KOG0610|consen 78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVME 157 (459)
T ss_pred HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEe
Confidence 4555678999999999999965 468999999976532 2356678899999999999999999999999999999
Q ss_pred ecCCCChHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCC--
Q 040826 141 FCAAGNLAQHLLR-KDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME-- 217 (347)
Q Consensus 141 ~~~~gsL~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~-- 217 (347)
||+||+|..+.++ .+..+++..++-+++.++-||+||| ..||++|||||+||||.++|.+.|+||.++......
T Consensus 158 yCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLH---mlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt 234 (459)
T KOG0610|consen 158 YCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLH---MLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPT 234 (459)
T ss_pred cCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHH---hhceeeccCCcceeEEecCCcEEeeeccccccCCCCCe
Confidence 9999999998864 4578999999999999999999999 899999999999999999999999999887543110
Q ss_pred ------------------------------c-c----------------------ceeecccCCCCccccccccCCccCC
Q 040826 218 ------------------------------E-S----------------------KVFTDVRGTIGYMDPEYMTNAKLTC 244 (347)
Q Consensus 218 ------------------------------~-~----------------------~~~~~~~~~~~y~aPE~~~~~~~~~ 244 (347)
. . ......+||-.|+|||++.|...+.
T Consensus 235 ~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgs 314 (459)
T KOG0610|consen 235 LVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGS 314 (459)
T ss_pred eeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCc
Confidence 0 0 0012246899999999999999999
Q ss_pred cccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCC
Q 040826 245 ASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGR 324 (347)
Q Consensus 245 ~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~R 324 (347)
++|+|+||+++|||+.|.+||.+...... +. .+......... .........+||.+.|.+||.+|
T Consensus 315 AVDWWtfGIflYEmLyG~TPFKG~~~~~T-l~----NIv~~~l~Fp~----------~~~vs~~akDLIr~LLvKdP~kR 379 (459)
T KOG0610|consen 315 AVDWWTFGIFLYEMLYGTTPFKGSNNKET-LR----NIVGQPLKFPE----------EPEVSSAAKDLIRKLLVKDPSKR 379 (459)
T ss_pred hhhHHHHHHHHHHHHhCCCCcCCCCchhh-HH----HHhcCCCcCCC----------CCcchhHHHHHHHHHhccChhhh
Confidence 99999999999999999999986544322 12 12111111110 11334579999999999999999
Q ss_pred CC----HHHHHH
Q 040826 325 PT----IDVVYE 332 (347)
Q Consensus 325 ps----~~ei~~ 332 (347)
.. +.||-+
T Consensus 380 lg~~rGA~eIK~ 391 (459)
T KOG0610|consen 380 LGSKRGAAEIKR 391 (459)
T ss_pred hccccchHHhhc
Confidence 88 666643
No 248
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=3.1e-40 Score=300.22 Aligned_cols=248 Identities=24% Similarity=0.300 Sum_probs=192.7
Q ss_pred CcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccC-----CChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEe
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKS-----NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYE 140 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 140 (347)
+|...+.||+|+||.||++... +++.||+|.+... .....+.+|..++..++||||+++++.+.+.+..++|||
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E 81 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIME 81 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence 5777889999999999999954 6899999998642 223467789999999999999999999999999999999
Q ss_pred ecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcc-
Q 040826 141 FCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES- 219 (347)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~- 219 (347)
|+++|+|.+++.+. ..+++..+..++.|++.||.||| +.|++||||||+||+++.++.++|+|||++........
T Consensus 82 ~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~~L~~lH---~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~ 157 (360)
T cd05627 82 FLPGGDMMTLLMKK-DTLSEEATQFYIAETVLAIDAIH---QLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRT 157 (360)
T ss_pred CCCCccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEeeccCCccccccccc
Confidence 99999999998654 45899999999999999999999 88999999999999999999999999999865421100
Q ss_pred ---------------------------------ceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcC
Q 040826 220 ---------------------------------KVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIE 266 (347)
Q Consensus 220 ---------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~ 266 (347)
.......||..|+|||++.+..++.++|+|||||++|+|++|+.||.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~ 237 (360)
T cd05627 158 EFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC 237 (360)
T ss_pred ccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCC
Confidence 00113468999999999999999999999999999999999999997
Q ss_pred CChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCC---HHHHHH
Q 040826 267 LDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPT---IDVVYE 332 (347)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps---~~ei~~ 332 (347)
...... .. ..+....... ..|.. .. ..+++.+++.+++ .||.+|++ +.++++
T Consensus 238 ~~~~~~-~~----~~i~~~~~~~---~~p~~-~~----~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~ 292 (360)
T cd05627 238 SETPQE-TY----RKVMNWKETL---VFPPE-VP----ISEKAKDLILRFC-TDSENRIGSNGVEEIKS 292 (360)
T ss_pred CCCHHH-HH----HHHHcCCCce---ecCCC-CC----CCHHHHHHHHHhc-cChhhcCCCCCHHHHhc
Confidence 543221 11 1111111000 00000 01 2246788888776 59999986 556554
No 249
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=2.6e-39 Score=283.74 Aligned_cols=245 Identities=26% Similarity=0.351 Sum_probs=199.5
Q ss_pred CcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeec
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFC 142 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 142 (347)
.|...+.||.|+||.||+|... ++..+|+|.+..... ...+.+|+.+++++.|+|++++++++.++...++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 3555678999999999999964 688999998865432 346888999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcccee
Q 040826 143 AAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVF 222 (347)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 222 (347)
++++|.+++.. ..+++.....++.|++.|+.||| +.+++|+||+|+||+++.++.++++|||++....... ...
T Consensus 85 ~~~~L~~~i~~--~~l~~~~~~~~~~~l~~~l~~lh---~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~-~~~ 158 (277)
T cd06640 85 GGGSALDLLRA--GPFDEFQIATMLKEILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-IKR 158 (277)
T ss_pred CCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCccCcCCChhhEEEcCCCCEEEcccccceeccCCc-ccc
Confidence 99999998854 35889999999999999999999 8899999999999999999999999999987654322 122
Q ss_pred ecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCC
Q 040826 223 TDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNIN 302 (347)
Q Consensus 223 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 302 (347)
....++..|+|||.+.+..++.++|+||||+++|+|++|..|+........ ......... ....
T Consensus 159 ~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-----~~~~~~~~~-----------~~~~ 222 (277)
T cd06640 159 NTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV-----LFLIPKNNP-----------PTLT 222 (277)
T ss_pred ccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH-----hhhhhcCCC-----------CCCc
Confidence 334578899999999888899999999999999999999999864322111 111111111 1233
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 303 RADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 303 ~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
......+.+++.+||+.+|.+||++.+++..
T Consensus 223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 223 GEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred hhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 3456789999999999999999999999765
No 250
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.7e-39 Score=291.58 Aligned_cols=259 Identities=20% Similarity=0.235 Sum_probs=191.2
Q ss_pred CCeeeec--CCeeEEEEEe-CCCCEEEEEEcccCCC----hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecC
Q 040826 71 RRFLGRG--SAGLVYKGVL-PSGQVVAIKHIYKSNN----TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCA 143 (347)
Q Consensus 71 ~~~lg~G--~~g~V~~~~~-~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 143 (347)
.++||+| +|++||++.. .+|+.||+|.+..... ...+.+|+.+++.++||||+++++++..++..++|+||++
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 82 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 82 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccC
Confidence 3569999 7899999985 5789999999865422 2357789999999999999999999999999999999999
Q ss_pred CCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcc-c-
Q 040826 144 AGNLAQHLLRK-DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES-K- 220 (347)
Q Consensus 144 ~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~-~- 220 (347)
+|+|.+++... ...+++..++.++.|++.||.||| +.+++||||||+||+++.++.++++||+.......... .
T Consensus 83 ~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~ 159 (327)
T cd08227 83 YGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLR 159 (327)
T ss_pred CCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCChhhEEEecCCcEEEcccchhhcccccccccc
Confidence 99999998653 345899999999999999999999 88999999999999999999999999986543221110 0
Q ss_pred ----eeecccCCCCccccccccC--CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCC----CCCcc
Q 040826 221 ----VFTDVRGTIGYMDPEYMTN--AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMG----KRPIK 290 (347)
Q Consensus 221 ----~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~ 290 (347)
......++..|+|||++.+ ..++.++||||||+++|+|++|+.||.................... ..+..
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (327)
T cd08227 160 VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAE 239 (327)
T ss_pred ccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhh
Confidence 0111246678999999875 4688999999999999999999999964322111111100000000 00000
Q ss_pred --------cccC-----------------CCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 291 --------DFED-----------------PRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 291 --------~~~~-----------------~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
...+ ..............+.+++.+||+.||++|||++++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 240 ELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred hcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 0000 00001122233467999999999999999999999986
No 251
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-41 Score=301.82 Aligned_cols=242 Identities=29% Similarity=0.398 Sum_probs=202.8
Q ss_pred cccCCeeeecCCeeEEEEE-eCCCCEEEEEEcccCC-----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 68 DWDRRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSN-----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
|...+.||.|+||-||-+. ..+.+.||||++.-+. ...++..|+..|++++|||++.+-|||..+...+|||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 4455779999999999999 4578899999986543 235788999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccce
Q 040826 142 CAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKV 221 (347)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 221 (347)
|-| |-.|++.-...++-+..+..|+.+.++||+||| +.+.||||||..|||+++.|.|||+|||.+....+
T Consensus 108 ClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLH---S~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P----- 178 (948)
T KOG0577|consen 108 CLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLH---SHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP----- 178 (948)
T ss_pred Hhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH---HhhHHhhhccccceEecCCCeeeeccccchhhcCc-----
Confidence 976 888888777778999999999999999999999 88999999999999999999999999999987543
Q ss_pred eecccCCCCcccccccc---CCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCC
Q 040826 222 FTDVRGTIGYMDPEYMT---NAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLN 298 (347)
Q Consensus 222 ~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 298 (347)
.+.++||+.|||||++. .+.|+-++||||||++..||...++|.... .....+..++.. + .|.+.
T Consensus 179 AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnM-NAMSALYHIAQN----e-------sPtLq 246 (948)
T KOG0577|consen 179 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM-NAMSALYHIAQN----E-------SPTLQ 246 (948)
T ss_pred hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCc-hHHHHHHHHHhc----C-------CCCCC
Confidence 34568999999999885 468999999999999999999999887532 222223332222 2 22332
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 299 GNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 299 ~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
..+..+.+++++..||++-|.+|||.++++++
T Consensus 247 ---s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 247 ---SNEWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred ---CchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 34667889999999999999999999998764
No 252
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=8e-40 Score=289.85 Aligned_cols=248 Identities=25% Similarity=0.365 Sum_probs=200.2
Q ss_pred hcCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC--ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN--NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
..+|...+.||+|++|.||++.. .+|+.|++|.+.... ....+.+|+.+++.++|+|++++++++..++..++||||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 97 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 97 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence 46778889999999999999995 578999999886533 335678899999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccce
Q 040826 142 CAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKV 221 (347)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 221 (347)
+++++|.+++.+ ..+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++........ .
T Consensus 98 ~~~~~L~~~~~~--~~~~~~~~~~~~~~l~~~L~~LH---~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~-~ 171 (297)
T cd06656 98 LAGGSLTDVVTE--TCMDEGQIAAVCRECLQALDFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-K 171 (297)
T ss_pred cCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEECcCccceEccCCcc-C
Confidence 999999998854 34788999999999999999999 78999999999999999999999999999876532221 1
Q ss_pred eecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCC
Q 040826 222 FTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNI 301 (347)
Q Consensus 222 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 301 (347)
.....++..|+|||.+.+..++.++|+||||+++|++++|..||......... . .....+... + ..
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~-~---~~~~~~~~~--------~--~~ 237 (297)
T cd06656 172 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL-Y---LIATNGTPE--------L--QN 237 (297)
T ss_pred cCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhe-e---eeccCCCCC--------C--CC
Confidence 22345788999999999888999999999999999999999999643221110 0 000001000 0 01
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 302 NRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 302 ~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
.......+.+++.+||+.+|++|||+.++++
T Consensus 238 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 238 PERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1223356889999999999999999999987
No 253
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=1.7e-39 Score=287.01 Aligned_cols=262 Identities=24% Similarity=0.317 Sum_probs=199.8
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
++|...+.||+|++|.||+|... +++.|++|.+..... ...+.+|++++++++|+||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 56778889999999999999965 688999999865322 24567899999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccce
Q 040826 142 CAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKV 221 (347)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 221 (347)
+.+ +|.+++......+++..+..++.|+++||.||| +.+++|+||+|+||+++.++.++|+|||++....... ..
T Consensus 85 ~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~-~~ 159 (291)
T cd07844 85 LDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCH---QRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPS-KT 159 (291)
T ss_pred CCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCHHHEEEcCCCCEEECccccccccCCCC-cc
Confidence 986 999988766667899999999999999999999 8899999999999999999999999999987543211 11
Q ss_pred eecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCc-------cccc
Q 040826 222 FTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPI-------KDFE 293 (347)
Q Consensus 222 ~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 293 (347)
.....++..|+|||.+.+ ..++.++||||+|+++|+|++|..||.......+......+......... ....
T Consensus 160 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (291)
T cd07844 160 YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFK 239 (291)
T ss_pred ccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccc
Confidence 122346788999998865 56888999999999999999999999755433333333322221110000 0000
Q ss_pred --------CCCCCCCC-CHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 294 --------DPRLNGNI-NRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 294 --------~~~l~~~~-~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
...+.... .......+.+++.+||+.+|++|||+.++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 240 PYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred cccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 00000000 0011256789999999999999999999875
No 254
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.6e-39 Score=286.08 Aligned_cols=252 Identities=26% Similarity=0.323 Sum_probs=200.4
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC---ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN---NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
++|...+.||+|+||.||++... +|..+++|.+.... ....+.+|+++++.++||||+++++.+...+..++|+||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 45666788999999999999954 68899999876542 235788999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccce
Q 040826 142 CAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKV 221 (347)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 221 (347)
+++++|.+++... ..+++.....++.|++.++.|||+ ..+++|+||+|+||++++++.++|+|||++..... ..
T Consensus 85 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~---~~ 158 (284)
T cd06620 85 MDCGSLDRIYKKG-GPIPVEILGKIAVAVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELIN---SI 158 (284)
T ss_pred CCCCCHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHH--hcCeeccCCCHHHEEECCCCcEEEccCCcccchhh---hc
Confidence 9999999887553 458999999999999999999994 35899999999999999999999999998865421 11
Q ss_pred eecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhh------hHHHHHHhhhcCCCCCcccccCC
Q 040826 222 FTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDAR------DQLTRKARDVSMGKRPIKDFEDP 295 (347)
Q Consensus 222 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 295 (347)
.....++..|+|||.+.+..++.++|+||||+++|+|++|..||....... ...............+
T Consensus 159 ~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 231 (284)
T cd06620 159 ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPP------- 231 (284)
T ss_pred cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCC-------
Confidence 223468999999999988889999999999999999999999997543221 1111122222211111
Q ss_pred CCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 296 RLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 296 ~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
.+ .......++.+|+.+||+.||++|||+.|+++.
T Consensus 232 ~~---~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~ 266 (284)
T cd06620 232 RL---PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAM 266 (284)
T ss_pred CC---CchhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 00 011234679999999999999999999999975
No 255
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=6.1e-40 Score=296.49 Aligned_cols=259 Identities=24% Similarity=0.295 Sum_probs=194.6
Q ss_pred HHhcCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC----ChhHHHHHHHHhhcCCCCcceeeeeEEEeC-----
Q 040826 63 NAINNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLVCLFGCCVEG----- 132 (347)
Q Consensus 63 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~----- 132 (347)
...++|...+.||+|+||.||+|.. .+++.||+|.+.... ....+.+|+.++++++||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 3567888899999999999999995 478899999986532 234577899999999999999999887543
Q ss_pred -CeEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccc
Q 040826 133 -GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLA 211 (347)
Q Consensus 133 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~ 211 (347)
...+++++++ +++|.+++. ...+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||++
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~ 165 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVK--CQKLSDEHVQFLIYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLA 165 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecccCChhhEEECCCCCEEEcCCccc
Confidence 3568999988 669988774 345899999999999999999999 889999999999999999999999999999
Q ss_pred eecCCCccceeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCC--
Q 040826 212 KMLGMEESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRP-- 288 (347)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 288 (347)
...... .....++..|+|||.+.+ ..++.++||||||+++|+|++|+.||...... +.+.............
T Consensus 166 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~ 240 (343)
T cd07878 166 RQADDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYI-DQLKRIMEVVGTPSPEVL 240 (343)
T ss_pred eecCCC----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHhCCCCHHHH
Confidence 865321 234468999999999877 57889999999999999999999998643221 1111111111000000
Q ss_pred --------------cccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 289 --------------IKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 289 --------------~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
........+. .......+.+.+|+.+||+.||.+|||+.|++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 241 KKISSEHARKYIQSLPHMPQQDLK-KIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred HhcchhhHHHHhhccccccchhHH-HhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000000 0000112457899999999999999999999864
No 256
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.7e-39 Score=281.43 Aligned_cols=245 Identities=24% Similarity=0.349 Sum_probs=197.5
Q ss_pred CcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 67 NDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
+|...+.||+|++|.||++.. .+++.+++|.+.... ....+.+|++++++++|||++++++.+..++..++|+||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 466778899999999999985 468899999886542 234688899999999999999999999989999999999
Q ss_pred cCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCC-ceEEeecccceecCCCcc
Q 040826 142 CAAGNLAQHLLRK-DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKL-EPKLSDFGLAKMLGMEES 219 (347)
Q Consensus 142 ~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~-~~kl~dfg~~~~~~~~~~ 219 (347)
+++++|.+++... ...+++..+..++.|++.++.||| +++++|+||+|+||++++++ .++++|||.+......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~-- 155 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVH---TKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK-- 155 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC--
Confidence 9999999999764 345899999999999999999999 88999999999999998654 5799999999876422
Q ss_pred ceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCC
Q 040826 220 KVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNG 299 (347)
Q Consensus 220 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 299 (347)
.......++..|+|||.+.+..++.++|+||||+++|+|++|..||...... . .......+...
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~-~----~~~~~~~~~~~----------- 219 (256)
T cd08220 156 SKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP-A----LVLKIMSGTFA----------- 219 (256)
T ss_pred ccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH-H----HHHHHHhcCCC-----------
Confidence 1222345788999999999888999999999999999999999998643221 1 11111111100
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 300 NINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 300 ~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
.........+.+++.+||+.+|++|||+.+++.
T Consensus 220 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 220 PISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred CCCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 011123357999999999999999999999986
No 257
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=8.6e-39 Score=281.64 Aligned_cols=261 Identities=26% Similarity=0.328 Sum_probs=198.1
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEe
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYE 140 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 140 (347)
++|...+.||+|++|.||+|... +|+.|++|++.... ....+.+|+.++++++|+|++++++++......+++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 35777889999999999999965 68999999886432 23457889999999999999999999999999999999
Q ss_pred ecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccc
Q 040826 141 FCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220 (347)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 220 (347)
|+++++|..+... ...+++..++.++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~~~~l~~~~~~-~~~~~~~~~~~~~~ql~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~- 155 (286)
T cd07847 81 YCDHTVLNELEKN-PRGVPEHLIKKIIWQTLQAVNFCH---KHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD- 155 (286)
T ss_pred ccCccHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCChhhEEEcCCCcEEECccccceecCCCcc-
Confidence 9999877776543 345899999999999999999999 78999999999999999999999999999987643221
Q ss_pred eeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcC----------CCCCc
Q 040826 221 VFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSM----------GKRPI 289 (347)
Q Consensus 221 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~----------~~~~~ 289 (347)
......++..|+|||.+.+ ..++.++|+||||+++|+|++|+.||...... +........... .....
T Consensus 156 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07847 156 DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDV-DQLYLIRKTLGDLIPRHQQIFSTNQFF 234 (286)
T ss_pred cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCChHHhhhccccccc
Confidence 2223457889999999876 56788999999999999999999998754322 222111111100 00000
Q ss_pred ccccCCCCCCCC-----CHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 290 KDFEDPRLNGNI-----NRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 290 ~~~~~~~l~~~~-----~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
.....+...... .......+.+++.+||+.+|++|||+.+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 235 KGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred ccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 000011110000 0122467899999999999999999999875
No 258
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=2e-39 Score=286.52 Aligned_cols=259 Identities=25% Similarity=0.339 Sum_probs=202.0
Q ss_pred cHHHHHHHhcCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC-ChhHHHHHHHHhhcC-CCCcceeeeeEEEeC-
Q 040826 57 SKDEIENAINNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN-NTDSFSREVEGLSRV-RHPNLVCLFGCCVEG- 132 (347)
Q Consensus 57 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~- 132 (347)
+.+.++.+.++|...+.||+|+||.||++.. .+++.+++|.+.... ....+.+|+.+++++ +|||++++++++...
T Consensus 13 ~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~ 92 (291)
T cd06639 13 GLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKAD 92 (291)
T ss_pred hcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEecc
Confidence 3455566678899999999999999999995 468899999886543 345677899999998 799999999998753
Q ss_pred ----CeEEEEEeecCCCChHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEE
Q 040826 133 ----GEQYLVYEFCAAGNLAQHLLR---KDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205 (347)
Q Consensus 133 ----~~~~lv~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl 205 (347)
+..++|+||+++++|.+++.. ....+++..++.++.|++.||.||| +.+++|+||+|+||+++.++.++|
T Consensus 93 ~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~nili~~~~~~kl 169 (291)
T cd06639 93 KLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLH---NNRIIHRDVKGNNILLTTEGGVKL 169 (291)
T ss_pred ccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEE
Confidence 358999999999999998753 3456899999999999999999999 789999999999999999999999
Q ss_pred eecccceecCCCccceeecccCCCCccccccccCC-----ccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHh
Q 040826 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNA-----KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280 (347)
Q Consensus 206 ~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~ 280 (347)
+|||.+........ ......++..|+|||.+... .++.++|+||||+++|+|++|+.||...... .......
T Consensus 170 ~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~-~~~~~~~- 246 (291)
T cd06639 170 VDFGVSAQLTSTRL-RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV-KTLFKIP- 246 (291)
T ss_pred eecccchhcccccc-cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH-HHHHHHh-
Confidence 99999876532211 12234578899999987643 3678999999999999999999998743221 1111111
Q ss_pred hhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 281 DVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 281 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
.... ....+ ..+....+.+++.+||+.+|++|||+.++++.
T Consensus 247 ---~~~~--~~~~~-------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 247 ---RNPP--PTLLH-------PEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred ---cCCC--CCCCc-------ccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 1111 11111 11233579999999999999999999999863
No 259
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=4.4e-39 Score=280.04 Aligned_cols=249 Identities=27% Similarity=0.415 Sum_probs=203.5
Q ss_pred CcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeec
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFC 142 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 142 (347)
+|...+.||+|++|.||++... +|+.+++|.+..... ...+.+|+..+.+++|+|++++++++...+..++++||+
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYM 81 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEec
Confidence 5677789999999999999965 589999999876643 567889999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccC-CCceeCCCCCCCEEecCCCceEEeecccceecCCCccce
Q 040826 143 AAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYID-GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKV 221 (347)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~-~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 221 (347)
++++|.+++... ..+++...+.++.|+++|+.||| + .+++|+||+|+||+++.++.++|+|||.+........ .
T Consensus 82 ~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh---~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~-~ 156 (264)
T cd06623 82 DGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLH---TKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD-Q 156 (264)
T ss_pred CCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHh---ccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCC-c
Confidence 999999998654 56899999999999999999999 7 9999999999999999999999999999887642222 1
Q ss_pred eecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCC
Q 040826 222 FTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNI 301 (347)
Q Consensus 222 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 301 (347)
.....++..|+|||.+.+..++.++|+||||+++|+|++|..|+...... ........+..... + ..
T Consensus 157 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~--~~~~~~~~~~~~~~-------~----~~ 223 (264)
T cd06623 157 CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQP--SFFELMQAICDGPP-------P----SL 223 (264)
T ss_pred ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccccc--CHHHHHHHHhcCCC-------C----CC
Confidence 22345788999999999888999999999999999999999998754310 11111111111111 1 11
Q ss_pred CHH-HHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 302 NRA-DFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 302 ~~~-~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
... ..+.+.+++.+||+.+|++|||+.++++.
T Consensus 224 ~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 224 PAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred CcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 111 34679999999999999999999999874
No 260
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=8.3e-39 Score=279.22 Aligned_cols=248 Identities=21% Similarity=0.339 Sum_probs=185.5
Q ss_pred eeeecCCeeEEEEEeCCC---CEEEEEEcccCC---ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCCCC
Q 040826 73 FLGRGSAGLVYKGVLPSG---QVVAIKHIYKSN---NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGN 146 (347)
Q Consensus 73 ~lg~G~~g~V~~~~~~~~---~~vavK~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs 146 (347)
.||+|+||.||++...++ ..+++|.+.... ....+.+|+..++.++|||++++++.+.+....++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 599999999999974333 346677665432 23578899999999999999999999999889999999999999
Q ss_pred hHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcc-cee
Q 040826 147 LAQHLLRK---DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES-KVF 222 (347)
Q Consensus 147 L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~-~~~ 222 (347)
|.+++.+. ....+...+..++.|++.||.||| +.+++|+||||+||+++.++.++|+|||++........ ...
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 158 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMH---KHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE 158 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence 99998653 234667778899999999999999 78999999999999999999999999998764321111 112
Q ss_pred ecccCCCCccccccccC-------CccCCcccHHHHHHHHHHHHhC-CCCcCCChhhhhHHHHHHhhhcCCCCCcccccC
Q 040826 223 TDVRGTIGYMDPEYMTN-------AKLTCASDIYSFGIVALQLLSG-QKVIELDFDARDQLTRKARDVSMGKRPIKDFED 294 (347)
Q Consensus 223 ~~~~~~~~y~aPE~~~~-------~~~~~~~Dv~slG~il~~lltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (347)
....++..|+|||++.. ..++.++||||||+++|+|+++ ..|+.. ....+.+....... .....+
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~-~~~~~~~~~~~~~~------~~~~~~ 231 (268)
T cd05086 159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSH-LSDREVLNHVIKDQ------QVKLFK 231 (268)
T ss_pred cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCC-CCHHHHHHHHHhhc------ccccCC
Confidence 33457889999998743 2457799999999999999975 455542 22222222222111 111222
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 040826 295 PRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEID 335 (347)
Q Consensus 295 ~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~ 335 (347)
+.+...+ .+.+.+++..|| .+|++|||+++|++.|.
T Consensus 232 ~~~~~~~----~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 232 PQLELPY----SERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CccCCCC----cHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 3332222 256888999999 67999999999998873
No 261
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=6.7e-39 Score=283.16 Aligned_cols=263 Identities=24% Similarity=0.281 Sum_probs=198.7
Q ss_pred hcCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEe
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYE 140 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 140 (347)
+++|...+.||+|+||.||+|.. .+|..+++|.+..... ...+.+|+..++.++|+||+++++++.++...++|+|
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 83 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFE 83 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEe
Confidence 46788889999999999999985 4688999999865422 2357789999999999999999999999999999999
Q ss_pred ecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccc
Q 040826 141 FCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220 (347)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 220 (347)
|+. ++|.+++......+++..+..++.|++.||.||| +.+++|+||||+||+++.++.++|+|||++....... .
T Consensus 84 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~ 158 (291)
T cd07870 84 YMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIH---GQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPS-Q 158 (291)
T ss_pred ccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEEcCCCcEEEeccccccccCCCC-C
Confidence 996 5888777655556888899999999999999999 7899999999999999999999999999987643211 1
Q ss_pred eeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCC----------C-
Q 040826 221 VFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKR----------P- 288 (347)
Q Consensus 221 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~----------~- 288 (347)
......++..|+|||.+.+ ..++.++|+||||+++|+|++|..||.......+.+............ .
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (291)
T cd07870 159 TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNY 238 (291)
T ss_pred CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccc
Confidence 1223356889999999875 457889999999999999999999997554433333333221110000 0
Q ss_pred cccccCC----CCCCCC-CHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 289 IKDFEDP----RLNGNI-NRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 289 ~~~~~~~----~l~~~~-~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
....... .+.... .......+.+++.+|+..||.+|||+.+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 239 KPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred cchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 0000000 000000 0011357889999999999999999999875
No 262
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-40 Score=290.31 Aligned_cols=244 Identities=25% Similarity=0.352 Sum_probs=206.4
Q ss_pred CcccCCeeeecCCeeEEEEE-eCCCCEEEEEEcccCC----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 67 NDWDRRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
-|+..+.||+|.|+.|-+++ .-+|+.||||++.+.. ....+.+|+..|+.++|||||++|++......+|||+|.
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL 98 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL 98 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence 35556679999999999998 3489999999997753 245788999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEec-CCCceEEeecccceecCCCccc
Q 040826 142 CAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLT-EKLEPKLSDFGLAKMLGMEESK 220 (347)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~-~~~~~kl~dfg~~~~~~~~~~~ 220 (347)
-++|+|.||+.++..-+++..+.++++||+.|+.|+| +..++||||||+|+.+- +-|-+||+|||.+-.+. +..
T Consensus 99 GD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCH---qLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~--PG~ 173 (864)
T KOG4717|consen 99 GDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCH---QLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ--PGK 173 (864)
T ss_pred cCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHh---hhhhhcccCCcceeEEeeecCceEeeeccccccCC--Ccc
Confidence 9999999999888888999999999999999999999 67799999999999865 67889999999988763 455
Q ss_pred eeecccCCCCccccccccCCccC-CcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCC
Q 040826 221 VFTDVRGTIGYMDPEYMTNAKLT-CASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNG 299 (347)
Q Consensus 221 ~~~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 299 (347)
..+..+|+..|.|||++.|..|+ +++||||||+|||.|+.|+.||+...+. +.+..+. ....
T Consensus 174 kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDS-ETLTmIm----DCKY------------ 236 (864)
T KOG4717|consen 174 KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDS-ETLTMIM----DCKY------------ 236 (864)
T ss_pred hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccch-hhhhhhh----cccc------------
Confidence 66778899999999999998887 6899999999999999999999843222 2222221 1121
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 300 NINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 300 ~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
.++.....+..+|+..||..||.+|.|.+||..
T Consensus 237 tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 237 TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred cCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 334455678999999999999999999999864
No 263
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=2.3e-39 Score=285.27 Aligned_cols=262 Identities=23% Similarity=0.326 Sum_probs=201.6
Q ss_pred CcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
+|...+.||+|++|.||+|... +|+.+++|.+.... ....+.+|+.++++++|||++++++++..+...++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 3666788999999999999954 78999999986543 235688999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccce
Q 040826 142 CAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKV 221 (347)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 221 (347)
+ +++|.+++......+++..++.++.|+++||.||| +.+++|+||+|+||+++.++.++++|||.+..........
T Consensus 81 ~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~ 156 (286)
T cd07832 81 M-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMH---ANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRL 156 (286)
T ss_pred c-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCc
Confidence 9 89999998766677999999999999999999999 7899999999999999999999999999988764333222
Q ss_pred eecccCCCCccccccccCC-ccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCC----------Ccc
Q 040826 222 FTDVRGTIGYMDPEYMTNA-KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKR----------PIK 290 (347)
Q Consensus 222 ~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~----------~~~ 290 (347)
.....++..|+|||.+.+. .++.++||||+|+++++|++|.++|..... ................ ...
T Consensus 157 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T cd07832 157 YSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEND-IEQLAIVFRTLGTPNEETWPGLTSLPDYN 235 (286)
T ss_pred cccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCH-HHHHHHHHHHcCCCChHHHhhccCcchhh
Confidence 3345688999999988654 568899999999999999999777754332 2222222221111000 000
Q ss_pred cccCCCCC----CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 291 DFEDPRLN----GNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 291 ~~~~~~l~----~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
....+.-. .....+....+.+++.+||+.+|.+|||++++++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 236 KITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred cccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00000000 00111233789999999999999999999999863
No 264
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=3.9e-39 Score=280.97 Aligned_cols=247 Identities=23% Similarity=0.325 Sum_probs=192.8
Q ss_pred cCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC-------ChhHHHHHHHHhhcCCCCcceeeeeEEEe--CCeE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN-------NTDSFSREVEGLSRVRHPNLVCLFGCCVE--GGEQ 135 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-------~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~ 135 (347)
.+|...+.||+|+||.||++.. .+|..+++|.+.... ....+.+|+.++++++||||+++++++.+ ....
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 3677888999999999999995 468899999886432 12357789999999999999999998875 3578
Q ss_pred EEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecC
Q 040826 136 YLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLG 215 (347)
Q Consensus 136 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 215 (347)
++++||+++++|.+++.... .+++...+.++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++....
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~LH---~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~ 157 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG-ALTESVTRKYTRQILEGMSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 157 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCCCccccc
Confidence 89999999999999886543 4889999999999999999999 8899999999999999999999999999987643
Q ss_pred CCc--cceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCccccc
Q 040826 216 MEE--SKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFE 293 (347)
Q Consensus 216 ~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (347)
... ........++..|+|||.+.+..++.++|+||||+++|+|++|+.||...... ...........
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~----~~~~~~~~~~~------- 226 (266)
T cd06651 158 TICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAM----AAIFKIATQPT------- 226 (266)
T ss_pred cccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchH----HHHHHHhcCCC-------
Confidence 211 11122345788999999999888999999999999999999999998743211 11111111111
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 294 DPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 294 ~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
.+. ++....+.+..++ +||..+|++|||+++|++
T Consensus 227 ~~~----~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 227 NPQ----LPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred CCC----CchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 111 1222234566666 688899999999999975
No 265
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.1e-39 Score=287.32 Aligned_cols=257 Identities=24% Similarity=0.355 Sum_probs=199.6
Q ss_pred HHHHHHhcCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCCC-hhHHHHHHHHhhcC-CCCcceeeeeEEE-----
Q 040826 59 DEIENAINNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNN-TDSFSREVEGLSRV-RHPNLVCLFGCCV----- 130 (347)
Q Consensus 59 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l-~h~niv~~~~~~~----- 130 (347)
+.+..+.++|...+.||+|+||.||++.. .+++.+++|.+..... ...+.+|+.+++++ +|||++++++++.
T Consensus 11 ~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 90 (286)
T cd06638 11 DSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVK 90 (286)
T ss_pred ecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccC
Confidence 44556678888899999999999999985 4688999998865433 35678899999999 6999999999874
Q ss_pred eCCeEEEEEeecCCCChHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEee
Q 040826 131 EGGEQYLVYEFCAAGNLAQHLLR---KDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSD 207 (347)
Q Consensus 131 ~~~~~~lv~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~d 207 (347)
.++..+++|||+++++|.+++.. ....+++..+..++.|++.|+.||| +.+++|+||+|+||++++++.++|+|
T Consensus 91 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~kl~d 167 (286)
T cd06638 91 NGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLH---VNKTIHRDVKGNNILLTTEGGVKLVD 167 (286)
T ss_pred CCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHH---hCCccccCCCHHhEEECCCCCEEEcc
Confidence 34578999999999999998742 3456889999999999999999999 88999999999999999999999999
Q ss_pred cccceecCCCccceeecccCCCCccccccccC-----CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhh
Q 040826 208 FGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN-----AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDV 282 (347)
Q Consensus 208 fg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~ 282 (347)
||++....... .......++..|+|||.+.. ..++.++|+||+|+++|+|++|+.|+...... ..... .
T Consensus 168 fg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~-~~~~~----~ 241 (286)
T cd06638 168 FGVSAQLTSTR-LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM-RALFK----I 241 (286)
T ss_pred CCceeecccCC-CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh-HHHhh----c
Confidence 99988653221 12233468899999998753 45788999999999999999999998643221 11111 1
Q ss_pred cCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 283 SMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 283 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
..... ....++ ......+.+++.+||+.||++|||+.|+++.
T Consensus 242 ~~~~~--~~~~~~-------~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 242 PRNPP--PTLHQP-------ELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred cccCC--CcccCC-------CCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 11110 001111 1123469999999999999999999999875
No 266
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=2.9e-39 Score=284.91 Aligned_cols=261 Identities=28% Similarity=0.342 Sum_probs=199.2
Q ss_pred CcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
+|...+.||+|++|.||+|... +++.|++|.+.... ....+.+|++++++++|+||+++++++..++..++++||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 5777889999999999999965 68899999886532 235688999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccce
Q 040826 142 CAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKV 221 (347)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 221 (347)
++++.+..+. .....+++..+..++.|++.|+.||| ..+++|+||+|+||++++++.++|+|||.+..........
T Consensus 82 ~~~~~l~~~~-~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~ 157 (288)
T cd07833 82 VERTLLELLE-ASPGGLPPDAVRSYIWQLLQAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASP 157 (288)
T ss_pred CCCCHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcccc
Confidence 9986665544 34455899999999999999999999 7899999999999999999999999999988765333223
Q ss_pred eecccCCCCccccccccCC-ccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCC----------CCcc
Q 040826 222 FTDVRGTIGYMDPEYMTNA-KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGK----------RPIK 290 (347)
Q Consensus 222 ~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~----------~~~~ 290 (347)
.....++..|+|||.+.+. .++.++|+||||+++|+|++|..||...... +.+........... ....
T Consensus 158 ~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (288)
T cd07833 158 LTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDI-DQLYLIQKCLGPLPPSHQELFSSNPRFA 236 (288)
T ss_pred ccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHhhhcccCcccc
Confidence 3345678899999999887 8899999999999999999999988754322 11111111110000 0000
Q ss_pred c--ccCCC----CCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 291 D--FEDPR----LNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 291 ~--~~~~~----l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
. +.... ...........++.+++.+||+.+|++|||++++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 237 GVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred ccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 0 00000 000111123578999999999999999999999875
No 267
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.5e-39 Score=316.29 Aligned_cols=251 Identities=23% Similarity=0.341 Sum_probs=195.3
Q ss_pred HhcCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC----ChhHHHHHHHHhhcCCCCcceeeeeEEEe--CCeEE
Q 040826 64 AINNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLVCLFGCCVE--GGEQY 136 (347)
Q Consensus 64 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~ 136 (347)
..++|...+.||+|+||.||++... ++..+++|.+.... ....+..|+.+++.++||||+++++++.. ...++
T Consensus 11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ly 90 (1021)
T PTZ00266 11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLY 90 (1021)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEE
Confidence 3567888899999999999999954 67789999886432 23468899999999999999999998865 35789
Q ss_pred EEEeecCCCChHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHhhhcc----CCCceeCCCCCCCEEecCC---------
Q 040826 137 LVYEFCAAGNLAQHLLR---KDSVLTWERRVKILRDCALALRYLHHYI----DGCIVHRDIKLTNILLTEK--------- 200 (347)
Q Consensus 137 lv~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~Lh~~~----~~~i~H~dl~p~Nili~~~--------- 200 (347)
+||||+++|+|.+++.. ....+++..++.|+.||+.||.|||+.. ..+|+|+||||+|||++.+
T Consensus 91 IVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~ 170 (1021)
T PTZ00266 91 ILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITA 170 (1021)
T ss_pred EEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccc
Confidence 99999999999998864 2356999999999999999999999531 1469999999999999642
Q ss_pred --------CceEEeecccceecCCCccceeecccCCCCccccccccC--CccCCcccHHHHHHHHHHHHhCCCCcCCChh
Q 040826 201 --------LEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN--AKLTCASDIYSFGIVALQLLSGQKVIELDFD 270 (347)
Q Consensus 201 --------~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~~lltg~~p~~~~~~ 270 (347)
+.+||+|||++...... .......||+.|+|||++.+ ..++.++|||||||++|+|++|..||.....
T Consensus 171 ~~~n~ng~~iVKLsDFGlAr~l~~~--s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~ 248 (1021)
T PTZ00266 171 QANNLNGRPIAKIGDFGLSKNIGIE--SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN 248 (1021)
T ss_pred cccccCCCCceEEccCCcccccccc--ccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc
Confidence 34899999999865322 12234568999999999864 4588999999999999999999999974332
Q ss_pred hhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 271 ARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
... ....+..... .. . .....++.+|+.+||+.+|.+|||+.+++.
T Consensus 249 ~~q----li~~lk~~p~-lp------i-----~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 249 FSQ----LISELKRGPD-LP------I-----KGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred HHH----HHHHHhcCCC-CC------c-----CCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 221 2222211110 00 0 012357999999999999999999999984
No 268
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=2e-39 Score=285.27 Aligned_cols=257 Identities=26% Similarity=0.379 Sum_probs=198.6
Q ss_pred cHHHHHHHhcCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC-ChhHHHHHHHHhhcC-CCCcceeeeeEEEe--
Q 040826 57 SKDEIENAINNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN-NTDSFSREVEGLSRV-RHPNLVCLFGCCVE-- 131 (347)
Q Consensus 57 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l-~h~niv~~~~~~~~-- 131 (347)
+..++....+.|...+.||+|+||.||+|.. .+++.+++|.+.... ....+..|+.+++++ +|+|++++++++..
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~ 86 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKS 86 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhccc
Confidence 3344444566788888999999999999995 468899999886543 345678899999988 69999999998853
Q ss_pred ----CCeEEEEEeecCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEe
Q 040826 132 ----GGEQYLVYEFCAAGNLAQHLLRK-DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLS 206 (347)
Q Consensus 132 ----~~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~ 206 (347)
....+++|||+++|+|.+++... ...+++..+..++.|++.|+.||| +.+++|+||+|+||++++++.++|+
T Consensus 87 ~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dl~~~nili~~~~~~~l~ 163 (282)
T cd06636 87 PPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLH---AHKVIHRDIKGQNVLLTENAEVKLV 163 (282)
T ss_pred ccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEe
Confidence 45789999999999999988653 345888889999999999999999 8899999999999999999999999
Q ss_pred ecccceecCCCccceeecccCCCCcccccccc-----CCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhh
Q 040826 207 DFGLAKMLGMEESKVFTDVRGTIGYMDPEYMT-----NAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARD 281 (347)
Q Consensus 207 dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~ 281 (347)
|||++....... .......++..|+|||.+. +..++.++|+||||+++|+|++|..||........ ... .
T Consensus 164 dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~-~~~---~ 238 (282)
T cd06636 164 DFGVSAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRA-LFL---I 238 (282)
T ss_pred eCcchhhhhccc-cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhh-hhh---H
Confidence 999987543211 1223345888999999875 34678899999999999999999999864322111 111 0
Q ss_pred hcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 282 VSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 282 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
..... +. ........++.+++.+||+.||.+|||+.||++
T Consensus 239 ~~~~~--------~~---~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 239 PRNPP--------PK---LKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred hhCCC--------CC---CcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 00000 00 111123457999999999999999999999975
No 269
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=4.3e-39 Score=280.56 Aligned_cols=252 Identities=29% Similarity=0.437 Sum_probs=201.4
Q ss_pred cCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC---ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN---NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
++|...+.||.|+||.||+|.. .++..+++|.+.... ....+.+|+..++.++|+|++++++.+......++++|+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 3677888999999999999995 467899999886533 345788999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcc
Q 040826 142 CAAGNLAQHLLRK--DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES 219 (347)
Q Consensus 142 ~~~gsL~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 219 (347)
+++++|.+++... ...+++..+..++.|++.|+.+|| +.|++|+||+|+||++++++.++|+|||++........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh---~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLH---SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 9999999998653 246899999999999999999999 88999999999999999999999999999876543222
Q ss_pred c---eeecccCCCCccccccccCC-ccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCC
Q 040826 220 K---VFTDVRGTIGYMDPEYMTNA-KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDP 295 (347)
Q Consensus 220 ~---~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (347)
. ......++..|+|||.+... .++.++|+||||+++|+|++|+.||...... ........ ... +
T Consensus 158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~-~~~~~~~~----~~~-------~ 225 (267)
T cd06610 158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM-KVLMLTLQ----NDP-------P 225 (267)
T ss_pred ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh-hhHHHHhc----CCC-------C
Confidence 2 12234578899999998776 7889999999999999999999998643222 11111111 111 0
Q ss_pred CCCCCC-CHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 296 RLNGNI-NRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 296 ~l~~~~-~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
.+.... .......+.+++.+||+.||++|||+.++++
T Consensus 226 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 226 SLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred CcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 111111 1233467899999999999999999999986
No 270
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=4.8e-39 Score=285.04 Aligned_cols=261 Identities=26% Similarity=0.332 Sum_probs=198.1
Q ss_pred CcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC-------hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEE
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN-------TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLV 138 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-------~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 138 (347)
+|...+.||+|++|.||+|... +|+.|++|.+..... ...+..|++++++++|+|++++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 3566778999999999999954 689999999875432 23467899999999999999999999999999999
Q ss_pred EeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCc
Q 040826 139 YEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE 218 (347)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 218 (347)
|||+ +++|.+++......+++..+..++.|+++||.||| +.+++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~ 156 (298)
T cd07841 81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLH---SNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN 156 (298)
T ss_pred Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC
Confidence 9999 88999998765557999999999999999999999 8899999999999999999999999999998764321
Q ss_pred cceeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCC-------Ccc
Q 040826 219 SKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKR-------PIK 290 (347)
Q Consensus 219 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 290 (347)
.......++..|+|||.+.+ ..++.++|+||||+++++|++|.++|....+ .+.............. ...
T Consensus 157 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (298)
T cd07841 157 -RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSD-IDQLGKIFEALGTPTEENWPGVTSLP 234 (298)
T ss_pred -ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCcc-HHHHHHHHHHcCCCchhhhhhccccc
Confidence 12223346778999998854 4678899999999999999999777754332 1222222211110000 000
Q ss_pred cccCCCCCC-----CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 291 DFEDPRLNG-----NINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 291 ~~~~~~l~~-----~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
......... .........+.+++.+||+.+|++|||+.|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 235 DYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred ccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 000000000 0112234689999999999999999999999873
No 271
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=4.6e-39 Score=279.89 Aligned_cols=250 Identities=28% Similarity=0.367 Sum_probs=199.5
Q ss_pred CcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC----ChhHHHHHHHHhhcCCCCcceeeeeEEEe--CCeEEEEE
Q 040826 67 NDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLVCLFGCCVE--GGEQYLVY 139 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~ 139 (347)
+|...+.||.|+||.||++.. .+|..+++|.+.... ....+.+|++.+++++|+|++++++.+.. ....++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 356678899999999999984 468899999886432 23457789999999999999999997754 45689999
Q ss_pred eecCCCChHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHhhhcc--CCCceeCCCCCCCEEecCCCceEEeecccceec
Q 040826 140 EFCAAGNLAQHLLRK---DSVLTWERRVKILRDCALALRYLHHYI--DGCIVHRDIKLTNILLTEKLEPKLSDFGLAKML 214 (347)
Q Consensus 140 e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~Lh~~~--~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~ 214 (347)
||+++++|.+++... ...+++..++.++.|++.||.|||..+ +.+++|+||+|+||+++.++.++++|||++...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 999999999998642 467899999999999999999999543 578999999999999999999999999998876
Q ss_pred CCCccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccC
Q 040826 215 GMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFED 294 (347)
Q Consensus 215 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (347)
..... ......++..|+|||.+.+..++.++|+||||+++++|++|..|+.... . .. .......+..+
T Consensus 161 ~~~~~-~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-~-~~---~~~~~~~~~~~------ 228 (265)
T cd08217 161 GHDSS-FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN-Q-LQ---LASKIKEGKFR------ 228 (265)
T ss_pred cCCcc-cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC-H-HH---HHHHHhcCCCC------
Confidence 43221 1233468899999999998889999999999999999999999987543 1 11 11222211110
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 295 PRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 295 ~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
..+......+.+++.+||+.+|++|||+.+|++.
T Consensus 229 -----~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 229 -----RIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred -----CCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 1222334679999999999999999999999863
No 272
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=3.1e-40 Score=296.84 Aligned_cols=238 Identities=24% Similarity=0.305 Sum_probs=185.0
Q ss_pred eeecCCeeEEEEEeC-CCCEEEEEEcccCC-----ChhHHHHHHHHhhcC---CCCcceeeeeEEEeCCeEEEEEeecCC
Q 040826 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSN-----NTDSFSREVEGLSRV---RHPNLVCLFGCCVEGGEQYLVYEFCAA 144 (347)
Q Consensus 74 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~~~lv~e~~~~ 144 (347)
||+|+||.||+|... +|+.||+|.+.... .......|..++... +||||+++++.+.+.+..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999954 68999999986432 122344566666555 699999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeec
Q 040826 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD 224 (347)
Q Consensus 145 gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 224 (347)
|+|.+++... ..+++..+..++.|+++||+||| +.+++||||||+|||++.++.++|+|||++...... ......
T Consensus 81 g~L~~~l~~~-~~~~~~~~~~~~~qil~al~~LH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~-~~~~~~ 155 (330)
T cd05586 81 GELFWHLQKE-GRFSEDRAKFYIAELVLALEHLH---KYDIVYRDLKPENILLDATGHIALCDFGLSKANLTD-NKTTNT 155 (330)
T ss_pred ChHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCC-CCCccC
Confidence 9999888654 45899999999999999999999 889999999999999999999999999998753221 222334
Q ss_pred ccCCCCccccccccCC-ccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCH
Q 040826 225 VRGTIGYMDPEYMTNA-KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINR 303 (347)
Q Consensus 225 ~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 303 (347)
..||..|+|||.+.+. .++.++||||||+++|+|++|+.||...... ...+.+..+..... . ..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~-----~~~~~i~~~~~~~~---~----~~--- 220 (330)
T cd05586 156 FCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQ-----QMYRNIAFGKVRFP---K----NV--- 220 (330)
T ss_pred ccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHH-----HHHHHHHcCCCCCC---C----cc---
Confidence 5689999999998754 5889999999999999999999999753221 11222222221111 0 01
Q ss_pred HHHHHHHHHHHHhccCCCCCCCC----HHHHHH
Q 040826 304 ADFESILKIAVLCVAKSSKGRPT----IDVVYE 332 (347)
Q Consensus 304 ~~~~~l~~l~~~cl~~~p~~Rps----~~ei~~ 332 (347)
..+++.+++.+||+.||.+||+ +.++++
T Consensus 221 -~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 221 -LSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred -CCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 2356889999999999999984 555554
No 273
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1e-39 Score=287.59 Aligned_cols=261 Identities=28% Similarity=0.372 Sum_probs=197.6
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC----hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEe
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN----TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYE 140 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 140 (347)
++|...+.||+|+||.||+|... +++.+|+|.+..... ...+.+|+++++.++|||++++++++..+...++++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 35677789999999999999965 689999998865432 3467889999999999999999999999999999999
Q ss_pred ecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccc
Q 040826 141 FCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220 (347)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 220 (347)
|+++++|.++.... ..+++..+..++.|++.|+.||| +.+++|+||+|+||++++++.++|+|||++....... .
T Consensus 81 ~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH---~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~-~ 155 (286)
T cd07846 81 FVDHTVLDDLEKYP-NGLDESRVRKYLFQILRGIEFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG-E 155 (286)
T ss_pred cCCccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc-c
Confidence 99998887766443 34899999999999999999999 7899999999999999999999999999988654322 2
Q ss_pred eeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcC---C-------CCCc
Q 040826 221 VFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSM---G-------KRPI 289 (347)
Q Consensus 221 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~---~-------~~~~ 289 (347)
......++..|+|||.+.+ ..++.++||||||+++|+|++|++||...... +........... . ....
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd07846 156 VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDI-DQLYHIIKCLGNLIPRHQEIFQKNPLF 234 (286)
T ss_pred ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchH-HHHHHHHHHhCCCchhhHHHhccchHh
Confidence 2233457889999998875 45778999999999999999999888644321 111111111000 0 0000
Q ss_pred ccccCCCCCC-----CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 290 KDFEDPRLNG-----NINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 290 ~~~~~~~l~~-----~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
.....+.... .........+.+++.+||+.+|++||++.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 235 AGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred hccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 0000010000 001123467999999999999999999999875
No 274
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=4.7e-39 Score=280.64 Aligned_cols=250 Identities=20% Similarity=0.359 Sum_probs=198.4
Q ss_pred CcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC--------ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEE
Q 040826 67 NDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN--------NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYL 137 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 137 (347)
+|...+.||+|++|.||++.. .+++.+++|.+.... ....+.+|+..+++++|+|++++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 366678899999999999984 578999999886533 12468889999999999999999999999999999
Q ss_pred EEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCC-ceEEeecccceecCC
Q 040826 138 VYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKL-EPKLSDFGLAKMLGM 216 (347)
Q Consensus 138 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~-~~kl~dfg~~~~~~~ 216 (347)
++||+++++|.+++.+. ..+++..+..++.|++.||.||| +.|++|+||+|+||+++.++ .++|+|||.+.....
T Consensus 81 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~al~~LH---~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~ 156 (268)
T cd06630 81 FVEWMAGGSVSHLLSKY-GAFKEAVIINYTEQLLRGLSYLH---ENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAA 156 (268)
T ss_pred EEeccCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccccccccccc
Confidence 99999999999988654 35889999999999999999999 88999999999999998776 599999999876543
Q ss_pred Ccc---ceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCccccc
Q 040826 217 EES---KVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFE 293 (347)
Q Consensus 217 ~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (347)
... .......++..|+|||.+.+..++.++|+||+|+++++|++|..||...... .......+......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~------- 228 (268)
T cd06630 157 KGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHS-NHLALIFKIASATT------- 228 (268)
T ss_pred ccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCc-chHHHHHHHhccCC-------
Confidence 211 1122345788999999998888999999999999999999999998643221 11111111110000
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 294 DPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 294 ~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
....+.....++.+++.+||+.+|++|||+.++++
T Consensus 229 ----~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 229 ----APSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred ----CCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 01223334467999999999999999999999985
No 275
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=3.2e-39 Score=303.04 Aligned_cols=263 Identities=16% Similarity=0.209 Sum_probs=191.3
Q ss_pred HHHHHhcCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccC-CChhHHHHHHHHhhcCC------CCcceeeeeEEEe
Q 040826 60 EIENAINNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKS-NNTDSFSREVEGLSRVR------HPNLVCLFGCCVE 131 (347)
Q Consensus 60 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~-~~~~~~~~e~~~l~~l~------h~niv~~~~~~~~ 131 (347)
++....++|...+.||+|+||.||+|.. .+++.||||++... ........|+.+++.++ |.+++++++++..
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 3444567899999999999999999995 46889999998643 22334566777777665 4458888888876
Q ss_pred C-CeEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccC-CCceeCCCCCCCEEecCCC--------
Q 040826 132 G-GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYID-GCIVHRDIKLTNILLTEKL-------- 201 (347)
Q Consensus 132 ~-~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~-~~i~H~dl~p~Nili~~~~-------- 201 (347)
. ...++|||++ +++|.+++.+. ..+++..+..++.|++.||.||| . .||+||||||+|||++.++
T Consensus 203 ~~~~~~iv~~~~-g~~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~yLH---~~~gIiHrDlKP~NILl~~~~~~~~~~~~ 277 (467)
T PTZ00284 203 ETGHMCIVMPKY-GPCLLDWIMKH-GPFSHRHLAQIIFQTGVALDYFH---TELHLMHTDLKPENILMETSDTVVDPVTN 277 (467)
T ss_pred CCceEEEEEecc-CCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---hcCCeecCCCCHHHEEEecCCcccccccc
Confidence 4 5788999988 66899888654 45899999999999999999999 5 5999999999999998765
Q ss_pred --------ceEEeecccceecCCCccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhh
Q 040826 202 --------EPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARD 273 (347)
Q Consensus 202 --------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~ 273 (347)
.+||+|||.+.... .......||..|+|||++.+..++.++|||||||++|||++|+.||...... +
T Consensus 278 ~~~~~~~~~vkl~DfG~~~~~~----~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~-~ 352 (467)
T PTZ00284 278 RALPPDPCRVRICDLGGCCDER----HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNL-E 352 (467)
T ss_pred cccCCCCceEEECCCCccccCc----cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-H
Confidence 49999999876421 2233457899999999999999999999999999999999999999753321 2
Q ss_pred HHHHHHhhhcCCC-------------------CCcccccCCC----C-CC--CCCHHHHHHHHHHHHHhccCCCCCCCCH
Q 040826 274 QLTRKARDVSMGK-------------------RPIKDFEDPR----L-NG--NINRADFESILKIAVLCVAKSSKGRPTI 327 (347)
Q Consensus 274 ~~~~~~~~~~~~~-------------------~~~~~~~~~~----l-~~--~~~~~~~~~l~~l~~~cl~~~p~~Rps~ 327 (347)
.+..+........ .......++. + .. .........+.+|+.+||+.||.+|||+
T Consensus 353 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta 432 (467)
T PTZ00284 353 HLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNA 432 (467)
T ss_pred HHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCH
Confidence 1111111100000 0000000000 0 00 0000112567899999999999999999
Q ss_pred HHHHH
Q 040826 328 DVVYE 332 (347)
Q Consensus 328 ~ei~~ 332 (347)
.|+++
T Consensus 433 ~e~L~ 437 (467)
T PTZ00284 433 RQMTT 437 (467)
T ss_pred HHHhc
Confidence 99986
No 276
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=3.3e-39 Score=282.41 Aligned_cols=251 Identities=28% Similarity=0.397 Sum_probs=198.9
Q ss_pred HhcCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC-ChhHHHHHHHHhhcC-CCCcceeeeeEEEeCC------e
Q 040826 64 AINNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN-NTDSFSREVEGLSRV-RHPNLVCLFGCCVEGG------E 134 (347)
Q Consensus 64 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~------~ 134 (347)
.+++|...+.||+|++|.||+|... +++.+++|.+.... ....+.+|+.+++++ .|+|++++++++.... .
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~ 83 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQ 83 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceE
Confidence 4578888999999999999999964 67899999887644 345788999999999 6999999999987644 4
Q ss_pred EEEEEeecCCCChHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccc
Q 040826 135 QYLVYEFCAAGNLAQHLLRK---DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLA 211 (347)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~ 211 (347)
.+++|||+++++|.+++... +..+++..+..++.|++.||.||| +.+++|+||+|+||++++++.++|+|||.+
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~ 160 (275)
T cd06608 84 LWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLH---ENKVIHRDIKGQNILLTKNAEVKLVDFGVS 160 (275)
T ss_pred EEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEEccCCeEEECCCccc
Confidence 89999999999999988542 467899999999999999999999 889999999999999999999999999998
Q ss_pred eecCCCccceeecccCCCCccccccccC-----CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCC
Q 040826 212 KMLGMEESKVFTDVRGTIGYMDPEYMTN-----AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGK 286 (347)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~ 286 (347)
...... ........++..|+|||.+.. ..++.++||||||+++++|++|..||...... ........ ..
T Consensus 161 ~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~----~~ 234 (275)
T cd06608 161 AQLDST-LGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM-RALFKIPR----NP 234 (275)
T ss_pred eecccc-hhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH-HHHHHhhc----cC
Confidence 765322 222233458889999998753 34678999999999999999999998643221 11111111 11
Q ss_pred CCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 287 RPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 287 ~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
. . .+ ........++.+++.+||+.||++|||+.++++
T Consensus 235 ~--~-----~~--~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 235 P--P-----TL--KSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred C--C-----CC--CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 0 0 01 111234467999999999999999999999976
No 277
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=7.1e-39 Score=280.18 Aligned_cols=252 Identities=21% Similarity=0.302 Sum_probs=195.9
Q ss_pred CcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC----C--------hhHHHHHHHHhhcCCCCcceeeeeEEEeCC
Q 040826 67 NDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN----N--------TDSFSREVEGLSRVRHPNLVCLFGCCVEGG 133 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~----~--------~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 133 (347)
+|...+.||+|+||.||+|.. .+|+.+|+|.+.... . .+.+.+|+..++.++|||++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 355678899999999999985 468899999875321 0 124678999999999999999999999999
Q ss_pred eEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeeccccee
Q 040826 134 EQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKM 213 (347)
Q Consensus 134 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~ 213 (347)
..++|+||+++++|.+++... ..+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.++++|||++..
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~ 157 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY-GRFEEQLVRFFTEQVLEGLAYLH---SKGILHRDLKADNLLVDADGICKISDFGISKK 157 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHh---hCCeeecCCChhhEEEcCCCeEEEeecccccc
Confidence 999999999999999998665 46899999999999999999999 78999999999999999999999999999876
Q ss_pred cCCCccc-eeecccCCCCccccccccCCc--cCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcc
Q 040826 214 LGMEESK-VFTDVRGTIGYMDPEYMTNAK--LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIK 290 (347)
Q Consensus 214 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~--~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (347)
....... ......++..|+|||.+.+.. ++.++|+||||+++|++++|..|+...... ........... .
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~----~~~~~~~~~~~---~ 230 (272)
T cd06629 158 SDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI----AAMFKLGNKRS---A 230 (272)
T ss_pred ccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchH----HHHHHhhcccc---C
Confidence 4321111 122345788999999987654 788999999999999999999998632211 11111111110 0
Q ss_pred cccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 291 DFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 291 ~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
....+ ........++.+++.+||+.+|++|||+.+|++.
T Consensus 231 ~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 231 PPIPP----DVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred CcCCc----cccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 00111 1112234679999999999999999999998863
No 278
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1e-38 Score=281.49 Aligned_cols=255 Identities=26% Similarity=0.327 Sum_probs=197.9
Q ss_pred CcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEe--CCeEEEEEe
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVE--GGEQYLVYE 140 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e 140 (347)
+|...+.||.|++|.||++... +++.+++|.+..... ...+.+|++++++++||||+++++++.+ .+..++|||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 81 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAME 81 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEE
Confidence 5677789999999999999964 688999998875433 3468899999999999999999998865 347899999
Q ss_pred ecCCCChHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCC
Q 040826 141 FCAAGNLAQHLLR---KDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217 (347)
Q Consensus 141 ~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 217 (347)
|+++++|.+++.. ....++...+..++.|+++||.||| +.+++|+||+|+||++++++.++|+|||++......
T Consensus 82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 158 (287)
T cd06621 82 YCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNS 158 (287)
T ss_pred ecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecCCeEEEeecccccccccc
Confidence 9999999887643 3456889999999999999999999 889999999999999999999999999998754321
Q ss_pred ccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCC
Q 040826 218 ESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRL 297 (347)
Q Consensus 218 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 297 (347)
. .....++..|+|||.+.+..++.++|+||||+++|+|++|..|+......................+ .+.+. .
T Consensus 159 ~---~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~ 232 (287)
T cd06621 159 L---AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNP--ELKDE-P 232 (287)
T ss_pred c---cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCch--hhccC-C
Confidence 1 1234578899999999988999999999999999999999999875422101111111111111100 00000 0
Q ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 298 NGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 298 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
.......+.+.+++.+||+.+|.+|||+.|+++
T Consensus 233 --~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 233 --GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred --CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 111123467999999999999999999999987
No 279
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=9.9e-39 Score=277.92 Aligned_cols=249 Identities=29% Similarity=0.400 Sum_probs=198.1
Q ss_pred CcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC----hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN----TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
+|...+.||+|+||.||+|... +++.+++|.+..... ...+.+|++++++++|+||+++++.+.+.+..++++||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 4667789999999999999954 788999999875433 35688999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccce
Q 040826 142 CAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKV 221 (347)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 221 (347)
+++++|.+++... ..+++..+..++.|++.|+.||| +.+++|+||+|+||++++++.++|+|||.+..........
T Consensus 81 ~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~ 156 (264)
T cd06626 81 CSGGTLEELLEHG-RILDEHVIRVYTLQLLEGLAYLH---SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTM 156 (264)
T ss_pred CCCCcHHHHHhhc-CCCChHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcc
Confidence 9999999988654 44789999999999999999999 8899999999999999999999999999988764332221
Q ss_pred e---ecccCCCCccccccccCCc---cCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCC
Q 040826 222 F---TDVRGTIGYMDPEYMTNAK---LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDP 295 (347)
Q Consensus 222 ~---~~~~~~~~y~aPE~~~~~~---~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (347)
. ....++..|+|||.+.+.. ++.++||||||++++++++|+.||............ ...+..+
T Consensus 157 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~----~~~~~~~------- 225 (264)
T cd06626 157 GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFH----VGAGHKP------- 225 (264)
T ss_pred cccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHH----HhcCCCC-------
Confidence 1 1345788999999998765 889999999999999999999998643221111111 1111111
Q ss_pred CCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 296 RLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 296 ~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
.+... ......+.+++.+||+.+|.+|||+.+++.
T Consensus 226 ~~~~~--~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 226 PIPDS--LQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred CCCcc--cccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00000 112356889999999999999999999875
No 280
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=8.8e-39 Score=281.71 Aligned_cols=251 Identities=25% Similarity=0.384 Sum_probs=203.2
Q ss_pred HhcCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC-hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 64 AINNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN-TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 64 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
..+.|...+.||+|++|.||++... ++..+++|.+..... ...+.+|++.++.++|+|++++++.+...+..++++||
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 96 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEY 96 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEec
Confidence 3556777788999999999999976 688999999876543 55788999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccce
Q 040826 142 CAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKV 221 (347)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 221 (347)
+++++|.+++......+++..+..++.|++.||.||| +.|++|+||+|+||+++.++.++|+|||.+....... ..
T Consensus 97 ~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH---~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~-~~ 172 (286)
T cd06614 97 MDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLH---SQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK-SK 172 (286)
T ss_pred cCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCChhhEEEcCCCCEEECccchhhhhccch-hh
Confidence 9999999999765557999999999999999999999 8999999999999999999999999999877543221 11
Q ss_pred eecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCC
Q 040826 222 FTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNI 301 (347)
Q Consensus 222 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 301 (347)
.....++..|+|||.+.+..++.++|+||||+++|+|++|..|+....... ....... ..... ...
T Consensus 173 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~-~~~~~~~---~~~~~---~~~------- 238 (286)
T cd06614 173 RNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR-ALFLITT---KGIPP---LKN------- 238 (286)
T ss_pred hccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHh---cCCCC---Ccc-------
Confidence 223457889999999988889999999999999999999999986432221 1111111 11100 000
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 302 NRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 302 ~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
.......+.+++.+||+.+|.+|||+.+|++
T Consensus 239 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 239 PEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred hhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 1113357999999999999999999999985
No 281
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.3e-38 Score=279.30 Aligned_cols=244 Identities=27% Similarity=0.382 Sum_probs=197.0
Q ss_pred cccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecC
Q 040826 68 DWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCA 143 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 143 (347)
|...+.||+|+||.||+|.. .++..+|+|.+..... ...+.+|+..+++++|||++++++++..++..++|+||++
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 85 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence 45567899999999999985 4688999998764332 3468889999999999999999999999999999999999
Q ss_pred CCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceee
Q 040826 144 AGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT 223 (347)
Q Consensus 144 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 223 (347)
+++|.+++.. ..+++..+..++.|++.++.+|| +.+++|+||+|+||+++.++.++++|||++....... ....
T Consensus 86 ~~~l~~~i~~--~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~-~~~~ 159 (277)
T cd06641 86 GGSALDLLEP--GPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-IKRN 159 (277)
T ss_pred CCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHc---cCCeecCCCCHHhEEECCCCCEEEeecccceecccch-hhhc
Confidence 9999998853 35899999999999999999999 8899999999999999999999999999987654221 1122
Q ss_pred cccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCH
Q 040826 224 DVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINR 303 (347)
Q Consensus 224 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 303 (347)
...++..|+|||.+.+..++.++|+||||+++|+|++|..|+...... ... ..+..... +.+ ..
T Consensus 160 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-~~~----~~~~~~~~-------~~~----~~ 223 (277)
T cd06641 160 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM-KVL----FLIPKNNP-------PTL----EG 223 (277)
T ss_pred cccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH-HHH----HHHhcCCC-------CCC----Cc
Confidence 345788999999998888899999999999999999999998643211 111 11111111 111 12
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 304 ADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 304 ~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
....++.+++.+||+.+|.+||++.++++.
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 224 NYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 233578999999999999999999999984
No 282
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=5.9e-39 Score=286.85 Aligned_cols=248 Identities=25% Similarity=0.300 Sum_probs=198.6
Q ss_pred CcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC-----hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEe
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN-----TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYE 140 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 140 (347)
+|...+.||+|++|.||+|... +++.+++|.+..... ...+..|++.++.++|+||+++++.+......+++||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 81 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD 81 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence 5777788999999999999965 589999999876432 2457889999999999999999999999999999999
Q ss_pred ecCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcc
Q 040826 141 FCAAGNLAQHLLRK-DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES 219 (347)
Q Consensus 141 ~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 219 (347)
|+.+++|.+++... ...+++.....++.|++.||+||| +.+++|+||||+||+++.++.++|+|||++........
T Consensus 82 ~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~ 158 (316)
T cd05574 82 YCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLH---LLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPP 158 (316)
T ss_pred ecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChHHeEEcCCCCEEEeecchhhccccccc
Confidence 99999999988653 356899999999999999999999 88999999999999999999999999998875432111
Q ss_pred c----------------------------eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhh
Q 040826 220 K----------------------------VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDA 271 (347)
Q Consensus 220 ~----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~ 271 (347)
. ......|+..|+|||.+.+..++.++||||||+++|+|++|..||......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~ 238 (316)
T cd05574 159 PVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRD 238 (316)
T ss_pred ccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchH
Confidence 0 011235788899999999888999999999999999999999998744322
Q ss_pred hhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCC----HHHHHH
Q 040826 272 RDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPT----IDVVYE 332 (347)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps----~~ei~~ 332 (347)
..+.... ....... ........+.+++.+||+.||++||| +++++.
T Consensus 239 -~~~~~~~----~~~~~~~----------~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 239 -ETFSNIL----KKEVTFP----------GSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred -HHHHHHh----cCCccCC----------CccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 1111111 1111110 01113468999999999999999999 666665
No 283
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.3e-38 Score=283.54 Aligned_cols=244 Identities=27% Similarity=0.366 Sum_probs=195.3
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC-----hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN-----TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVY 139 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 139 (347)
..|...+.||+|+||.||+|... +|+.|++|.+..... ...+.+|+.+++.++|||++++.+++.+.+..++|+
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 34667788999999999999954 689999998864321 235788999999999999999999999999999999
Q ss_pred eecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcc
Q 040826 140 EFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES 219 (347)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 219 (347)
||+++ ++.+.+......+++..+..++.|++.||.||| +.+++|+||+|+||++++++.++|+|||++......
T Consensus 95 e~~~g-~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH---~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~-- 168 (307)
T cd06607 95 EYCLG-SASDILEVHKKPLQEVEIAAICHGALQGLAYLH---SHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA-- 168 (307)
T ss_pred HhhCC-CHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEECCCCCEEEeecCcceecCCC--
Confidence 99975 888877655567999999999999999999999 889999999999999999999999999998764321
Q ss_pred ceeecccCCCCcccccccc---CCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCC
Q 040826 220 KVFTDVRGTIGYMDPEYMT---NAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPR 296 (347)
Q Consensus 220 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (347)
....++..|+|||.+. ...++.++||||||+++|+|++|+.|+.......... .......+ .
T Consensus 169 ---~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~-----~~~~~~~~-------~ 233 (307)
T cd06607 169 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY-----HIAQNDSP-------T 233 (307)
T ss_pred ---CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHH-----HHhcCCCC-------C
Confidence 2345788999999874 3568889999999999999999999986433221111 11111110 0
Q ss_pred CCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 297 LNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 297 l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
+ ........+.+++.+||+.+|++|||+.+|+..
T Consensus 234 ~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 234 L---SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred C---CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0 112244679999999999999999999999873
No 284
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-39 Score=295.83 Aligned_cols=243 Identities=27% Similarity=0.471 Sum_probs=200.3
Q ss_pred CeeeecCCeeEEEEEeC--CCC--EEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCC
Q 040826 72 RFLGRGSAGLVYKGVLP--SGQ--VVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAA 144 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~--~~~--~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 144 (347)
++||+|.||.|++|.|. +|+ .||||.+..... ..+|.+|+.+|.+|+|+|++++||+..+ ....+|||.++.
T Consensus 116 e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELapl 194 (1039)
T KOG0199|consen 116 ELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELAPL 194 (1039)
T ss_pred HHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhccc
Confidence 57999999999999975 455 589999987643 4689999999999999999999999887 678899999999
Q ss_pred CChHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcc-cee
Q 040826 145 GNLAQHLLR-KDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES-KVF 222 (347)
Q Consensus 145 gsL~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~-~~~ 222 (347)
|+|.+.|.. ....|.......++.|||.|++||. .+++|||||...|+++-....+||+|||+.+.++.... ..+
T Consensus 195 GSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLe---skrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm 271 (1039)
T KOG0199|consen 195 GSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLE---SKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVM 271 (1039)
T ss_pred chHHHHHhhccccceeHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhhhheecccceeeeecccceeccCCCCcceEe
Confidence 999999987 5567888899999999999999999 88999999999999999999999999999998764322 222
Q ss_pred -ecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhC-CCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCC
Q 040826 223 -TDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG-QKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGN 300 (347)
Q Consensus 223 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 300 (347)
....-+..|+|||.+....++.++|||+|||++|||+|+ ..|+.+- ...+ +.+.+..++ +-.
T Consensus 272 ~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~-~g~q----IL~~iD~~e-----------rLp 335 (1039)
T KOG0199|consen 272 APQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGC-RGIQ----ILKNIDAGE-----------RLP 335 (1039)
T ss_pred cCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCC-CHHH----HHHhccccc-----------cCC
Confidence 334567899999999999999999999999999999985 5565432 1111 222222111 123
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 040826 301 INRADFESILKIAVLCVAKSSKGRPTIDVVYEEI 334 (347)
Q Consensus 301 ~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l 334 (347)
-++.|.+++++++..||.++|.+|||+..|.+.+
T Consensus 336 RPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 336 RPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred CCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 4557889999999999999999999999998544
No 285
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=7.2e-39 Score=282.85 Aligned_cols=242 Identities=26% Similarity=0.291 Sum_probs=198.2
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccC-----CChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKS-----NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVY 139 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 139 (347)
++|...+.||+|++|.||++... +++.+++|.+... .....+.+|++++++++||||+++++++.+.+..+++|
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 35777889999999999999954 6899999988653 23356888999999999999999999999999999999
Q ss_pred eecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcc
Q 040826 140 EFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES 219 (347)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 219 (347)
||+++++|.+++... ..+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++......
T Consensus 81 e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~-- 154 (290)
T cd05580 81 EYVPGGELFSHLRKS-GRFPEPVARFYAAQVVLALEYLH---SLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR-- 154 (290)
T ss_pred ecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC--
Confidence 999999999998654 46899999999999999999999 789999999999999999999999999998875432
Q ss_pred ceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCC
Q 040826 220 KVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNG 299 (347)
Q Consensus 220 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 299 (347)
.....++..|+|||.+.+..++.++|+||||+++|+|++|+.||...... . .......+..+..
T Consensus 155 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~----~~~~~~~~~~~~~--------- 218 (290)
T cd05580 155 --TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPI-Q----IYEKILEGKVRFP--------- 218 (290)
T ss_pred --CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH-H----HHHHHhcCCccCC---------
Confidence 23345888999999998888899999999999999999999998744311 1 1111112221111
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q 040826 300 NINRADFESILKIAVLCVAKSSKGRP-----TIDVVYE 332 (347)
Q Consensus 300 ~~~~~~~~~l~~l~~~cl~~~p~~Rp-----s~~ei~~ 332 (347)
......+.+++.+||+.||.+|| +++++++
T Consensus 219 ---~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 219 ---SFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred ---ccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 11235789999999999999999 7777764
No 286
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.5e-38 Score=274.38 Aligned_cols=246 Identities=30% Similarity=0.438 Sum_probs=202.0
Q ss_pred cccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC--ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCC
Q 040826 68 DWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN--NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAA 144 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 144 (347)
|...+.||+|++|.||++... ++..+++|++.... ....+.+|++.++.++|+|++++++++......++++||+++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~ 81 (253)
T cd05122 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSG 81 (253)
T ss_pred ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCC
Confidence 566788999999999999965 68899999997765 456788999999999999999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeec
Q 040826 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD 224 (347)
Q Consensus 145 gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 224 (347)
++|.+++......+++..+..++.|+++|+.+|| ..+++|+||+|+||++++++.++|+|||.+........ ...
T Consensus 82 ~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--~~~ 156 (253)
T cd05122 82 GSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLH---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--RNT 156 (253)
T ss_pred CcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhh---cCCEecCCCCHHHEEEccCCeEEEeecccccccccccc--ccc
Confidence 9999998765567899999999999999999999 88999999999999999999999999999887643221 334
Q ss_pred ccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHH
Q 040826 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRA 304 (347)
Q Consensus 225 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 304 (347)
..++..|+|||.+.+..++.++|+||||+++++|++|+.|+........ ...... .. ...... . ..
T Consensus 157 ~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~---~~---~~~~~~-----~--~~ 222 (253)
T cd05122 157 MVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKA-LFKIAT---NG---PPGLRN-----P--EK 222 (253)
T ss_pred eecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHH-HHHHHh---cC---CCCcCc-----c--cc
Confidence 5688899999999888889999999999999999999999874322111 111111 00 000100 0 01
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 305 DFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 305 ~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
....+.+++.+||+.||++|||+.++++
T Consensus 223 ~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 223 WSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred cCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1357999999999999999999999986
No 287
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=7.3e-39 Score=281.70 Aligned_cols=247 Identities=25% Similarity=0.347 Sum_probs=191.8
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC---hhHHHHHHHH-hhcCCCCcceeeeeEEEeCCeEEEEEe
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN---TDSFSREVEG-LSRVRHPNLVCLFGCCVEGGEQYLVYE 140 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~lv~e 140 (347)
++|...+.||+|+||.||++... +|+.||+|.+..... ...+..|+.. ++..+|||++++++++..++..+++||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 35777888999999999999964 689999998875432 2345556664 566789999999999999999999999
Q ss_pred ecCCCChHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHhhhccCC-CceeCCCCCCCEEecCCCceEEeecccceecCC
Q 040826 141 FCAAGNLAQHLLR---KDSVLTWERRVKILRDCALALRYLHHYIDG-CIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM 216 (347)
Q Consensus 141 ~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~-~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 216 (347)
|+++ +|.+++.. ....+++..++.++.|++.||.||| ++ +++|+||||+||+++.++.++|+|||++.....
T Consensus 81 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 81 VMDT-SLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLH---SKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhcc-cHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 9975 88887743 3356899999999999999999999 65 899999999999999999999999999876532
Q ss_pred CccceeecccCCCCccccccccC----CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccc
Q 040826 217 EESKVFTDVRGTIGYMDPEYMTN----AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDF 292 (347)
Q Consensus 217 ~~~~~~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (347)
. .......++..|+|||.+.+ ..++.++|+||||+++|+|++|+.||.......+.+...... ..
T Consensus 157 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~----~~----- 225 (283)
T cd06617 157 S--VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEE----PS----- 225 (283)
T ss_pred c--cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhc----CC-----
Confidence 1 11223457889999998864 456889999999999999999999986432222222222111 10
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 293 EDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 293 ~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
+.+. ....++++.+++.+||+.+|.+|||+.++++
T Consensus 226 --~~~~---~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 226 --PQLP---AEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred --CCCC---ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000 0113357999999999999999999999987
No 288
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=4.1e-39 Score=279.23 Aligned_cols=247 Identities=26% Similarity=0.395 Sum_probs=198.0
Q ss_pred CcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccC----CChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKS----NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
+|...+.||+|+||.||++... +|..+++|.+... .....+.+|+.+++.++|+|++++++.+......++++||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 3566788999999999999964 5889999988653 3445678999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCc-eEEeecccceecCCCcc
Q 040826 142 CAAGNLAQHLLRK-DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLE-PKLSDFGLAKMLGMEES 219 (347)
Q Consensus 142 ~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~-~kl~dfg~~~~~~~~~~ 219 (347)
+++++|.+++... ...+++..+..++.|+++|+.||| +.+++|+||+|+||++++++. ++++|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~- 156 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIH---DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM- 156 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEcCCCCeEEecccccchhccCCc-
Confidence 9999999988653 345899999999999999999999 789999999999999998864 6999999887654221
Q ss_pred ceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCC
Q 040826 220 KVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNG 299 (347)
Q Consensus 220 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 299 (347)
.......++..|+|||...+..++.++|+||||+++++|++|..|+...... +.... ...+...
T Consensus 157 ~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~----~~~~~~~----------- 220 (257)
T cd08225 157 ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLH-QLVLK----ICQGYFA----------- 220 (257)
T ss_pred ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH-HHHHH----HhcccCC-----------
Confidence 1222345888999999998888999999999999999999999998643322 11111 1111100
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 300 NINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 300 ~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
.........+.+++.+||+.+|++|||+.++++.
T Consensus 221 ~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 221 PISPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred CCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 0111223579999999999999999999999863
No 289
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=9.8e-39 Score=282.39 Aligned_cols=261 Identities=22% Similarity=0.319 Sum_probs=198.6
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC----hhHHHHHHHHhhcCCCCcceeeeeEEEeC--CeEEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN----TDSFSREVEGLSRVRHPNLVCLFGCCVEG--GEQYLV 138 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv 138 (347)
++|...+.||.|+||.||+|... +++.+++|.+..... ...+.+|+..+++++||||+++++++... ...+++
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46777788999999999999965 688999999865432 22467899999999999999999998877 889999
Q ss_pred EeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCc
Q 040826 139 YEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE 218 (347)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 218 (347)
+||+++ +|.+++......+++..++.++.|++.||+||| +.+++|+||+|+||+++.++.++|+|||++.......
T Consensus 85 ~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 160 (293)
T cd07843 85 MEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLH---DNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL 160 (293)
T ss_pred ehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc
Confidence 999986 999988765567999999999999999999999 7899999999999999999999999999988764321
Q ss_pred cceeecccCCCCccccccccCC-ccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcC-------------
Q 040826 219 SKVFTDVRGTIGYMDPEYMTNA-KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSM------------- 284 (347)
Q Consensus 219 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~------------- 284 (347)
.......++..|+|||.+.+. .++.++|+||||+++|+|++|..||...... +...........
T Consensus 161 -~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (293)
T cd07843 161 -KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEI-DQLNKIFKLLGTPTEKIWPGFSELP 238 (293)
T ss_pred -cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCchHHHHHhhccc
Confidence 222334578899999988754 4688999999999999999999998754322 111111111000
Q ss_pred -CC-CCcccccCCCCCCCCCHH-HHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 285 -GK-RPIKDFEDPRLNGNINRA-DFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 285 -~~-~~~~~~~~~~l~~~~~~~-~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
.. ..........+...++.. ..+.+.+++.+||+.+|++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 239 GAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred hhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 00 000000111111111111 3467899999999999999999999985
No 290
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=7e-39 Score=284.93 Aligned_cols=253 Identities=24% Similarity=0.256 Sum_probs=198.7
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC-----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN-----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVY 139 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 139 (347)
++|...+.||+|+||.||++... +++.|++|.+.... ....+.+|+.+++.++||||+++++.+..++..+++|
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 35777889999999999999954 67899999886542 2345778999999999999999999999999999999
Q ss_pred eecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcc
Q 040826 140 EFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES 219 (347)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 219 (347)
||+++++|.+++... ..+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.++++|||++........
T Consensus 81 e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~ 156 (305)
T cd05609 81 EYVEGGDCATLLKNI-GALPVDMARMYFAETVLALEYLH---NYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLT 156 (305)
T ss_pred ecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHEEECCCCCEEEeeCCCccccCcCcc
Confidence 999999999998654 45899999999999999999999 78999999999999999999999999998864211100
Q ss_pred --------------ceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCC
Q 040826 220 --------------KVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMG 285 (347)
Q Consensus 220 --------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~ 285 (347)
.......++..|+|||.+.+..++.++|+||||+++|+|++|..||...... . .......+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~-~----~~~~~~~~ 231 (305)
T cd05609 157 TNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE-E----LFGQVISD 231 (305)
T ss_pred ccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-H----HHHHHHhc
Confidence 0011234678899999998888999999999999999999999998643221 1 11111111
Q ss_pred CCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 040826 286 KRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDK 336 (347)
Q Consensus 286 ~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~ 336 (347)
... .+.... .....+.+++.+||+.+|++||++.++.+.|+.
T Consensus 232 ~~~-----~~~~~~----~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 232 DIE-----WPEGDE----ALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred ccC-----CCCccc----cCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 111 011111 233568999999999999999998777777665
No 291
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.1e-38 Score=279.78 Aligned_cols=244 Identities=28% Similarity=0.458 Sum_probs=195.8
Q ss_pred cccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC---ChhHHHHHHHHhhcCC---CCcceeeeeEEEeCCeEEEEEe
Q 040826 68 DWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN---NTDSFSREVEGLSRVR---HPNLVCLFGCCVEGGEQYLVYE 140 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e 140 (347)
|...+.||+|+||.||+|.. .+++.+++|.+.... ....+.+|+.++++++ |||++++++++..+...+++||
T Consensus 3 y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e 82 (277)
T cd06917 3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIME 82 (277)
T ss_pred hhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEe
Confidence 55667899999999999995 578999999886532 2346778999999986 9999999999999999999999
Q ss_pred ecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccc
Q 040826 141 FCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220 (347)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 220 (347)
|+++++|.+++... .+++..++.++.|++.|+.||| +.+++|+||+|+||++++++.++++|||.+....... .
T Consensus 83 ~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~-~ 156 (277)
T cd06917 83 YAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYIH---KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS-S 156 (277)
T ss_pred cCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc-c
Confidence 99999999988543 6899999999999999999999 8899999999999999999999999999998765332 2
Q ss_pred eeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCC
Q 040826 221 VFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNG 299 (347)
Q Consensus 221 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 299 (347)
......++..|+|||.+.+ ..++.++|+||||+++|+|++|..||........ ....... ..+.+..
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~-----~~~~~~~-------~~~~~~~ 224 (277)
T cd06917 157 KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRA-----MMLIPKS-------KPPRLED 224 (277)
T ss_pred ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhh-----hhccccC-------CCCCCCc
Confidence 2233468889999998865 4578899999999999999999999864322111 1111000 1111111
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 300 NINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 300 ~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
. ....++.+++.+||+.||++||++.++++
T Consensus 225 ~---~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 225 N---GYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred c---cCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 1 13357999999999999999999999976
No 292
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1e-38 Score=279.29 Aligned_cols=251 Identities=23% Similarity=0.352 Sum_probs=194.1
Q ss_pred cccCCeeeecCCeeEEEEEeC----CCCEEEEEEcccCCC----hhHHHHHHHHhhcCCCCcceeeeeEEEeCC------
Q 040826 68 DWDRRFLGRGSAGLVYKGVLP----SGQVVAIKHIYKSNN----TDSFSREVEGLSRVRHPNLVCLFGCCVEGG------ 133 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 133 (347)
|...+.||+|+||.||+|... ++..+|+|.+..... .+.+.+|++.+++++|||++++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 345678999999999999843 468899998875432 345788999999999999999999876532
Q ss_pred eEEEEEeecCCCChHHHhhcC-----CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeec
Q 040826 134 EQYLVYEFCAAGNLAQHLLRK-----DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDF 208 (347)
Q Consensus 134 ~~~lv~e~~~~gsL~~~l~~~-----~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~df 208 (347)
..++++||+++|+|.+++... ...+++.....++.|++.|++||| +.+++|+||||+||+++.++.++++||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLS---SKNFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccchhhEEEcCCCCEEECcc
Confidence 247899999999999887421 235788999999999999999999 789999999999999999999999999
Q ss_pred ccceecCCCccc-eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCC
Q 040826 209 GLAKMLGMEESK-VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGK 286 (347)
Q Consensus 209 g~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 286 (347)
|.+......... ......++..|++||...+..++.++||||||+++|+|++ |..||..... .. .. .....+.
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~-~~-~~---~~~~~~~ 232 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN-SE-IY---NYLIKGN 232 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH-HH-HH---HHHHcCC
Confidence 998865322211 1222345678999999988889999999999999999999 7787764322 11 11 1111111
Q ss_pred CCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 040826 287 RPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKA 337 (347)
Q Consensus 287 ~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~ 337 (347)
.. .........+.+++.+||+.+|++|||+.++++.|+++
T Consensus 233 ~~-----------~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 233 RL-----------KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred cC-----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 00 00112335799999999999999999999999999876
No 293
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-39 Score=297.60 Aligned_cols=269 Identities=28% Similarity=0.396 Sum_probs=216.7
Q ss_pred CCeeeecCCeeEEEEE-eCCCCEEEEEEccc---CCChhHHHHHHHHhhcCCCCcceeeeeEEEeCC------eEEEEEe
Q 040826 71 RRFLGRGSAGLVYKGV-LPSGQVVAIKHIYK---SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGG------EQYLVYE 140 (347)
Q Consensus 71 ~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~~~lv~e 140 (347)
.+.||+|+||.||+|+ ..+|+.||||.... ....+.+.+|+++|++++|+|||++++.-++.. ...++||
T Consensus 18 ~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmE 97 (732)
T KOG4250|consen 18 DERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVME 97 (732)
T ss_pred hhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEe
Confidence 3569999999999999 56899999999987 345678899999999999999999999865533 5689999
Q ss_pred ecCCCChHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEec--CCCc--eEEeecccceec
Q 040826 141 FCAAGNLAQHLLR--KDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLT--EKLE--PKLSDFGLAKML 214 (347)
Q Consensus 141 ~~~~gsL~~~l~~--~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~--~~~~--~kl~dfg~~~~~ 214 (347)
||.||+|...+.+ +..-+++.+.+.++.+++.||.||| .+||+||||||.||++- ++|+ -||+|||.|+.+
T Consensus 98 yC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~Lr---En~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel 174 (732)
T KOG4250|consen 98 YCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLR---ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAREL 174 (732)
T ss_pred ecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHH---HcCceeccCCCCcEEEeecCCCceEEeeecccccccC
Confidence 9999999999975 3355999999999999999999999 89999999999999984 3343 699999999987
Q ss_pred CCCccceeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCccccc
Q 040826 215 GMEESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFE 293 (347)
Q Consensus 215 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (347)
. +.....+.+||..|++||.+.. ..|+..+|.|||||++|+..||..||.+..................+..+....
T Consensus 175 ~--d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~ 252 (732)
T KOG4250|consen 175 D--DNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGA 252 (732)
T ss_pred C--CCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEee
Confidence 5 3447788999999999999984 889999999999999999999999998654443333333333333332233333
Q ss_pred CCCCCC------------CCCHHHHHHHHHHHHHhccCCCCCCC--CHHHHHHHHHHHHHhhhhh
Q 040826 294 DPRLNG------------NINRADFESILKIAVLCVAKSSKGRP--TIDVVYEEIDKAWKNTMVE 344 (347)
Q Consensus 294 ~~~l~~------------~~~~~~~~~l~~l~~~cl~~~p~~Rp--s~~ei~~~l~~~~~~~~~~ 344 (347)
.+..++ ...+.....+.+.+..+|..+|.+|- .+.+....+.++++...+.
T Consensus 253 ~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~~~vvh 317 (732)
T KOG4250|consen 253 QEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILNLKVVH 317 (732)
T ss_pred ecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHhhheeE
Confidence 333322 22345567888888889999999998 9999999999999876653
No 294
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=7.3e-39 Score=281.88 Aligned_cols=259 Identities=24% Similarity=0.329 Sum_probs=195.9
Q ss_pred CcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC----hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN----TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
+|...+.||.|++|.||+|... +|+.|++|.+..... ...+.+|++.+++++|||++++++++.+.+..+++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 3667788999999999999854 689999998864322 24688999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccc
Q 040826 142 CAAGNLAQHLLRK-DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220 (347)
Q Consensus 142 ~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 220 (347)
+. ++|.+++... ...+++..+..++.|++.||+||| +.+++|+||+|+||++++++.++|+|||++....... .
T Consensus 81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh---~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~-~ 155 (284)
T cd07860 81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-R 155 (284)
T ss_pred cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCc-c
Confidence 96 4898888543 456899999999999999999999 7899999999999999999999999999987653221 1
Q ss_pred eeecccCCCCccccccccCC-ccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCC-----------
Q 040826 221 VFTDVRGTIGYMDPEYMTNA-KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRP----------- 288 (347)
Q Consensus 221 ~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~----------- 288 (347)
......++..|+|||.+.+. .++.++|+||||+++|+|+||+.||....... ...............
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07860 156 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPDEVVWPGVTSLPDY 234 (284)
T ss_pred ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHhCCCChhhhhhhhHHHHH
Confidence 12223467889999988764 46889999999999999999999987543322 222222111111000
Q ss_pred ---cccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 289 ---IKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 289 ---~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
........+ .........++.+++.+||+.||.+|||++++++
T Consensus 235 ~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 235 KPSFPKWARQDF-SKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HhhcccccccCH-HHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 000000000 0001122356889999999999999999999975
No 295
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=5.9e-39 Score=283.54 Aligned_cols=243 Identities=25% Similarity=0.361 Sum_probs=194.2
Q ss_pred CCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC--ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCCCCh
Q 040826 71 RRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN--NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNL 147 (347)
Q Consensus 71 ~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 147 (347)
...||+|+||.||++... ++..|++|.+.... ....+.+|+..++.++|+|++++++.+...+..+++|||+++++|
T Consensus 27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L 106 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGAL 106 (292)
T ss_pred hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcH
Confidence 356999999999999854 68899999885433 234678999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeecccC
Q 040826 148 AQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRG 227 (347)
Q Consensus 148 ~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 227 (347)
.+++.. ..+++..+..++.|++.|+.||| +.+++|+||+|+||++++++.++|+|||++...... ........+
T Consensus 107 ~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~-~~~~~~~~~ 180 (292)
T cd06658 107 TDIVTH--TRMNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE-VPKRKSLVG 180 (292)
T ss_pred HHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccc-cccCceeec
Confidence 998743 35889999999999999999999 789999999999999999999999999998754321 122233457
Q ss_pred CCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHH
Q 040826 228 TIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFE 307 (347)
Q Consensus 228 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 307 (347)
+..|+|||.+.+..++.++|+||||+++|+|++|+.||...... .......... . +... .......
T Consensus 181 ~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~-~~~~~~~~~~-~----------~~~~--~~~~~~~ 246 (292)
T cd06658 181 TPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL-QAMRRIRDNL-P----------PRVK--DSHKVSS 246 (292)
T ss_pred CccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhcC-C----------Cccc--cccccCH
Confidence 88999999998888999999999999999999999998743221 1111111110 0 0000 0112235
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 308 SILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 308 ~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
.+.+++.+||..||.+|||++++++.
T Consensus 247 ~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 247 VLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred HHHHHHHHHccCChhHCcCHHHHhhC
Confidence 78899999999999999999999874
No 296
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1.7e-38 Score=282.00 Aligned_cols=264 Identities=25% Similarity=0.311 Sum_probs=199.2
Q ss_pred HHhcCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC----hhHHHHHHHHhhcCCCCcceeeeeEEEeCC----
Q 040826 63 NAINNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN----TDSFSREVEGLSRVRHPNLVCLFGCCVEGG---- 133 (347)
Q Consensus 63 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~h~niv~~~~~~~~~~---- 133 (347)
...++|...+.||+|+||.||+|... +|+.|++|.+..... ...+.+|++++++++|||++++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 45677888899999999999999965 688999999865422 245778999999999999999999887654
Q ss_pred ------eEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEee
Q 040826 134 ------EQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSD 207 (347)
Q Consensus 134 ------~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~d 207 (347)
..++++||+++ ++.+.+......+++..++.++.|++.||+||| +.+++|+||+|+||++++++.++|+|
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~kl~d 159 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCH---KKNFLHRDIKCSNILLNNKGQIKLAD 159 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCcEEeCc
Confidence 78999999987 787877665567999999999999999999999 88999999999999999999999999
Q ss_pred cccceecCCCccceeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCC
Q 040826 208 FGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGK 286 (347)
Q Consensus 208 fg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~ 286 (347)
||.+...............++..|+|||.+.+ ..++.++||||||+++++|++|++||..... ...+...........
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~-~~~~~~~~~~~~~~~ 238 (302)
T cd07864 160 FGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQE-LAQLELISRLCGSPC 238 (302)
T ss_pred ccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCC
Confidence 99988654332222223345778999998864 4578899999999999999999999875432 222222222111110
Q ss_pred C-Cccccc--------CC------CCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 287 R-PIKDFE--------DP------RLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 287 ~-~~~~~~--------~~------~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
. ..+... ++ ..... .......+.+++.+||+.+|.+|||+.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 239 PAVWPDVIKLPYFNTMKPKKQYRRRLREE-FSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred hhhcccccccccccccccccccccchhhh-cCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0 000000 00 00000 0012467999999999999999999999875
No 297
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=4e-38 Score=281.53 Aligned_cols=243 Identities=28% Similarity=0.369 Sum_probs=194.4
Q ss_pred cccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCCC-----hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 68 DWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNN-----TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
|...+.||+|+||.||++.. .+|..+++|.+..... ...+.+|++.+++++|||++++++++.++...++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 55567899999999999995 4688999998864321 23578899999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccce
Q 040826 142 CAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKV 221 (347)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 221 (347)
+.+ +|.+.+......+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.++|+|||++.....
T Consensus 107 ~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH---~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~----- 177 (317)
T cd06635 107 CLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP----- 177 (317)
T ss_pred CCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcccEEECCCCCEEEecCCCccccCC-----
Confidence 975 888887665667899999999999999999999 88999999999999999999999999998875432
Q ss_pred eecccCCCCcccccccc---CCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCC
Q 040826 222 FTDVRGTIGYMDPEYMT---NAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLN 298 (347)
Q Consensus 222 ~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 298 (347)
.....++..|+|||.+. +..++.++|+||||+++|+|++|+.||...... ......... +...
T Consensus 178 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~-~~~~~~~~~---~~~~---------- 243 (317)
T cd06635 178 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-SALYHIAQN---ESPT---------- 243 (317)
T ss_pred cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHHhc---cCCC----------
Confidence 22345788999999874 456888999999999999999999998643211 111111111 1100
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 040826 299 GNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEI 334 (347)
Q Consensus 299 ~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l 334 (347)
.........+.+++.+||+.+|.+||++.++++..
T Consensus 244 -~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 278 (317)
T cd06635 244 -LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHM 278 (317)
T ss_pred -CCCccccHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence 00112335789999999999999999999999854
No 298
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=3.7e-38 Score=274.64 Aligned_cols=247 Identities=23% Similarity=0.275 Sum_probs=193.9
Q ss_pred cCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC---C----hhHHHHHHHHhhcCCCCcceeeeeEEEeC--CeE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN---N----TDSFSREVEGLSRVRHPNLVCLFGCCVEG--GEQ 135 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~----~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~ 135 (347)
.+|...+.||+|+||.||.+.. .+|..|++|.+.... . ...+.+|+.++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 4677788999999999999995 468999999875321 1 23577899999999999999999988663 467
Q ss_pred EEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecC
Q 040826 136 YLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLG 215 (347)
Q Consensus 136 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 215 (347)
++++||+++++|.+++... ..+++....+++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||.+....
T Consensus 82 ~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~ 157 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY-GALTENVTRKYTRQILEGVSYLH---SNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQ 157 (265)
T ss_pred EEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEecCCCCEEECcCccccccc
Confidence 8999999999999988654 34788999999999999999999 8899999999999999999999999999987643
Q ss_pred CCcc--ceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCccccc
Q 040826 216 MEES--KVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFE 293 (347)
Q Consensus 216 ~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (347)
.... .......++..|+|||.+.+..++.++|+||||+++|+|++|+.||...... . ...+......
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-~---~~~~~~~~~~------- 226 (265)
T cd06652 158 TICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM-A---AIFKIATQPT------- 226 (265)
T ss_pred cccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH-H---HHHHHhcCCC-------
Confidence 2111 1122345788999999998888999999999999999999999998743211 1 1111111111
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 294 DPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 294 ~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
. ...+......+.+++.+|| .+|.+||++++|++
T Consensus 227 ~----~~~~~~~~~~~~~~i~~~l-~~p~~Rp~~~~il~ 260 (265)
T cd06652 227 N----PVLPPHVSDHCRDFLKRIF-VEAKLRPSADELLR 260 (265)
T ss_pred C----CCCchhhCHHHHHHHHHHh-cChhhCCCHHHHhc
Confidence 0 1223344467888888898 49999999999875
No 299
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.8e-38 Score=279.58 Aligned_cols=245 Identities=24% Similarity=0.336 Sum_probs=195.9
Q ss_pred cccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC--ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCC
Q 040826 68 DWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN--NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAA 144 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 144 (347)
|...+.||+|++|.||++.. .+++.+++|.+.... ....+.+|+.+++.++|||++++++++...+..++++||+++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~ 100 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG 100 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence 33446899999999999995 478899999875432 234578899999999999999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeec
Q 040826 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD 224 (347)
Q Consensus 145 gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 224 (347)
++|.+++.. ..+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.++++|||.+...... ......
T Consensus 101 ~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~-~~~~~~ 174 (285)
T cd06648 101 GALTDIVTH--TRMNEEQIATVCLAVLKALSFLH---AQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKE-VPRRKS 174 (285)
T ss_pred CCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChhhEEEcCCCcEEEcccccchhhccC-Cccccc
Confidence 999998865 45899999999999999999999 889999999999999999999999999987754322 112233
Q ss_pred ccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHH
Q 040826 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRA 304 (347)
Q Consensus 225 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 304 (347)
..++..|+|||...+..++.++|+||||+++|+|++|+.||...... ...........+ .... ...
T Consensus 175 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~-----~~~~~~~~~~~~-------~~~~--~~~ 240 (285)
T cd06648 175 LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPL-----QAMKRIRDNLPP-------KLKN--LHK 240 (285)
T ss_pred ccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHH-----HHHHHHHhcCCC-------CCcc--ccc
Confidence 45888999999998888999999999999999999999998643221 111111111110 0000 011
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 305 DFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 305 ~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
....+.+++.+||+.+|++|||+.++++
T Consensus 241 ~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 241 VSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred CCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 2357999999999999999999999986
No 300
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=1.9e-38 Score=282.71 Aligned_cols=263 Identities=28% Similarity=0.378 Sum_probs=197.3
Q ss_pred hcCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC----hhHHHHHHHHhhcCCCCcceeeeeEEEeC--CeEEE
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN----TDSFSREVEGLSRVRHPNLVCLFGCCVEG--GEQYL 137 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~l 137 (347)
.++|...+.||+|+||.||+|... +|+.||+|.+..... ...+.+|+.++++++|+|++++++++... +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 456788889999999999999954 689999998864322 22466899999999999999999998754 56899
Q ss_pred EEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCC
Q 040826 138 VYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217 (347)
Q Consensus 138 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 217 (347)
||||+.+ +|.+++......+++..+..++.|++.|+.||| +.+++|+||+|+||++++++.++|+|||.+......
T Consensus 86 v~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~ 161 (309)
T cd07845 86 VMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLH---ENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLP 161 (309)
T ss_pred EEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccceeeecCCc
Confidence 9999976 898888765567999999999999999999999 889999999999999999999999999999876432
Q ss_pred ccceeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCc-------
Q 040826 218 ESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPI------- 289 (347)
Q Consensus 218 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~------- 289 (347)
. .......++..|+|||.+.+ ..++.++|+||||+++|+|++|..||...... ..+..............
T Consensus 162 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
T cd07845 162 A-KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEI-EQLDLIIQLLGTPNESIWPGFSDL 239 (309)
T ss_pred c-CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCChhhchhhhcc
Confidence 2 12223345778999998865 56789999999999999999999999754322 22222221111000000
Q ss_pred ---ccccC--CCCCC--CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 290 ---KDFED--PRLNG--NINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 290 ---~~~~~--~~l~~--~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
..+.. ..+.. ........++.+++.+||+.||++|||+.++++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 240 PLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred cccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00000 00000 0001124578899999999999999999999863
No 301
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=4.9e-38 Score=272.30 Aligned_cols=247 Identities=30% Similarity=0.393 Sum_probs=202.2
Q ss_pred cccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC----hhHHHHHHHHhhcCCCCcceeeeeEEEeC--CeEEEEEe
Q 040826 68 DWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN----TDSFSREVEGLSRVRHPNLVCLFGCCVEG--GEQYLVYE 140 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e 140 (347)
|...+.||+|++|.||+|... ++..+++|.+..... .+.+.+|+..+++++|+|++++++.+... ...++++|
T Consensus 2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 81 (260)
T cd06606 2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLE 81 (260)
T ss_pred ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEE
Confidence 566788999999999999965 788999999876543 55788999999999999999999999888 89999999
Q ss_pred ecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccc
Q 040826 141 FCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220 (347)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 220 (347)
|+++++|.+++.+.. .+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.++|+|||.+.........
T Consensus 82 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh---~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 157 (260)
T cd06606 82 YVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG 157 (260)
T ss_pred ecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEcccccEEeccccccc
Confidence 999999999987654 7899999999999999999999 789999999999999999999999999998876533221
Q ss_pred -eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCC
Q 040826 221 -VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNG 299 (347)
Q Consensus 221 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 299 (347)
......++..|+|||...+..++.++|+||||+++++|++|..||.......... ........ . .
T Consensus 158 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~----~~~~~~~~-~---------~ 223 (260)
T cd06606 158 EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAAL----YKIGSSGE-P---------P 223 (260)
T ss_pred ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHH----HhccccCC-C---------c
Confidence 1234568889999999988889999999999999999999999987543111111 11111000 0 0
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 300 NINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 300 ~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
.++......+.+++.+|++.+|++||++.+++.
T Consensus 224 ~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 224 EIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred CCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 122223468999999999999999999999986
No 302
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.5e-38 Score=281.65 Aligned_cols=243 Identities=24% Similarity=0.349 Sum_probs=194.5
Q ss_pred CCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC--ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCCCCh
Q 040826 71 RRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN--NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNL 147 (347)
Q Consensus 71 ~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 147 (347)
...||+|+||.||++... +++.|++|.+.... ....+.+|+..++.++|||++++++++..++..++++||+++++|
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L 105 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGAL 105 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCH
Confidence 356999999999999854 68999999986432 345688899999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeecccC
Q 040826 148 AQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRG 227 (347)
Q Consensus 148 ~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 227 (347)
.+++.. ..+++..++.++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++...... ........+
T Consensus 106 ~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~-~~~~~~~~~ 179 (297)
T cd06659 106 TDIVSQ--TRLNEEQIATVCESVLQALCYLH---SQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD-VPKRKSLVG 179 (297)
T ss_pred HHHHhh--cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHeEEccCCcEEEeechhHhhcccc-cccccceec
Confidence 987743 45889999999999999999999 889999999999999999999999999998754322 112233458
Q ss_pred CCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHH
Q 040826 228 TIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFE 307 (347)
Q Consensus 228 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 307 (347)
+..|+|||.+.+..++.++|+||||+++++|++|+.||...... ..+.. ........ .. .......
T Consensus 180 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-~~~~~----~~~~~~~~--~~-------~~~~~~~ 245 (297)
T cd06659 180 TPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV-QAMKR----LRDSPPPK--LK-------NAHKISP 245 (297)
T ss_pred CccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHH----HhccCCCC--cc-------ccCCCCH
Confidence 89999999999888999999999999999999999998743221 11111 11111000 00 0112235
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 308 SILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 308 ~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
.+.+++.+||+.+|.+|||+.++++.
T Consensus 246 ~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 246 VLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred HHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 68899999999999999999999873
No 303
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=2.1e-38 Score=280.51 Aligned_cols=261 Identities=18% Similarity=0.198 Sum_probs=193.9
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC----ChhHHHHHHHHhhcCC-CCcceeeeeEEEeCCe-----
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN----NTDSFSREVEGLSRVR-HPNLVCLFGCCVEGGE----- 134 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~----- 134 (347)
++|...+.||+|+||.||+|... +|+.||+|.+.... ....+.+|+.+++.++ |||++++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 35777889999999999999954 68999999876532 2346788999999995 6999999999887655
Q ss_pred EEEEEeecCCCChHHHhhcC----CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecC-CCceEEeecc
Q 040826 135 QYLVYEFCAAGNLAQHLLRK----DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTE-KLEPKLSDFG 209 (347)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~-~~~~kl~dfg 209 (347)
.+++|||+++ +|.+++... ...+++..++.++.|++.||.||| +.+++|+||+|+||+++. ++.++|+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH---KHGVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEecCCCeEEEeecc
Confidence 8999999986 888887542 345899999999999999999999 889999999999999998 8899999999
Q ss_pred cceecCCCccceeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCC-
Q 040826 210 LAKMLGMEESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKR- 287 (347)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~- 287 (347)
.+........ ......++..|+|||.+.+ ..++.++|+||||+++|+|++|..||......... ............
T Consensus 157 ~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~ 234 (295)
T cd07837 157 LGRAFSIPVK-SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQL-LHIFKLLGTPTEQ 234 (295)
T ss_pred cceecCCCcc-ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHH-HHHHHHhCCCChh
Confidence 9886532211 1122346788999998865 46789999999999999999999998754332221 111111110000
Q ss_pred Cccccc-------CCCC----CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 288 PIKDFE-------DPRL----NGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 288 ~~~~~~-------~~~l----~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
...... .+.. .....+....++.+++.+||+.||.+|||+.+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 235 VWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred hCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 000000 0000 00011223467899999999999999999999875
No 304
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-40 Score=295.38 Aligned_cols=244 Identities=25% Similarity=0.328 Sum_probs=197.9
Q ss_pred CeeeecCCeeEEEEEeCC-CCEEEEEEcccCC--ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCCCChH
Q 040826 72 RFLGRGSAGLVYKGVLPS-GQVVAIKHIYKSN--NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLA 148 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 148 (347)
..||-|+||.||++..++ +-..|-|.+.... .-++|.-|+++|..+.||+|+++++.|...+.++++.|||.||-+.
T Consensus 38 GELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAVD 117 (1187)
T KOG0579|consen 38 GELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAVD 117 (1187)
T ss_pred hhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchHh
Confidence 459999999999999764 4445667765433 3468999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeecccCC
Q 040826 149 QHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGT 228 (347)
Q Consensus 149 ~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 228 (347)
..+..-+..+.+.++.-+++|++.||.||| +++|+|||||..|||++-+|.++|+|||++.... ........+.||
T Consensus 118 aimlEL~r~LtE~QIqvvc~q~ldALn~LH---s~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~-~t~qkRDsFIGT 193 (1187)
T KOG0579|consen 118 AIMLELGRVLTEDQIQVVCYQVLDALNWLH---SQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNK-STRQKRDSFIGT 193 (1187)
T ss_pred HHHHHhccccchHHHHHHHHHHHHHHHHHh---hcchhhhhccccceEEEecCcEeeecccccccch-hHHhhhccccCC
Confidence 988887888999999999999999999999 8999999999999999999999999999987643 222335567899
Q ss_pred CCccccccc-----cCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCH
Q 040826 229 IGYMDPEYM-----TNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINR 303 (347)
Q Consensus 229 ~~y~aPE~~-----~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 303 (347)
+.|||||++ ...+|+.++||||||++|.+|..+.+|...-.+. ....+.....++ .++.| .
T Consensus 194 PYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpM----RVllKiaKSePP---TLlqP-------S 259 (1187)
T KOG0579|consen 194 PYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPM----RVLLKIAKSEPP---TLLQP-------S 259 (1187)
T ss_pred cccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchH----HHHHHHhhcCCC---cccCc-------c
Confidence 999999977 3568999999999999999999999887522211 112222222221 12222 2
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 304 ADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 304 ~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
.....+.+++.+||.+||..||++.+++++
T Consensus 260 ~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 260 HWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred hhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 444678899999999999999999999864
No 305
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-40 Score=267.41 Aligned_cols=244 Identities=26% Similarity=0.407 Sum_probs=199.7
Q ss_pred CeeeecCCeeEEEEEe-CCCCEEEEEEcccCCChhH---HHHHHHHhhcCC-CCcceeeeeEEEeCCeEEEEEeecCCCC
Q 040826 72 RFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNNTDS---FSREVEGLSRVR-HPNLVCLFGCCVEGGEQYLVYEFCAAGN 146 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~---~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~gs 146 (347)
..||.|..|+||++.. .+|..+|||.+....+.++ +...+.++...+ +|+||+.+|+|..+...++.||.|.. .
T Consensus 98 ~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~-C 176 (391)
T KOG0983|consen 98 GDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMST-C 176 (391)
T ss_pred HhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHH-H
Confidence 4589999999999995 4689999999988766554 555666665555 89999999999999999999999965 6
Q ss_pred hHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeeccc
Q 040826 147 LAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVR 226 (347)
Q Consensus 147 L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 226 (347)
+..++.....++++..+-++...+..||.||.. .++++|||+||+|||+|+.|++|+||||.+..+- ++...+...
T Consensus 177 ~ekLlkrik~piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlv--dSkAhtrsA 252 (391)
T KOG0983|consen 177 AEKLLKRIKGPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLV--DSKAHTRSA 252 (391)
T ss_pred HHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceee--ccccccccc
Confidence 777776666779999999999999999999987 5699999999999999999999999999998763 455556677
Q ss_pred CCCCccccccccC---CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCH
Q 040826 227 GTIGYMDPEYMTN---AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINR 303 (347)
Q Consensus 227 ~~~~y~aPE~~~~---~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 303 (347)
|.+.|||||.+.- ..|+..+||||||++++||.||+.||.....+-+.+..+..+.. |.|.+..
T Consensus 253 GC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~eP-----------P~L~~~~-- 319 (391)
T KOG0983|consen 253 GCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEP-----------PLLPGHM-- 319 (391)
T ss_pred CCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCC-----------CCCCccc--
Confidence 9999999998863 46889999999999999999999999875555555555544321 2222211
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 304 ADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 304 ~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
.....+.+++..||++|+.+||...+++++
T Consensus 320 gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 320 GFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred CcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 144579999999999999999999998764
No 306
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=2.6e-38 Score=278.57 Aligned_cols=260 Identities=26% Similarity=0.327 Sum_probs=198.5
Q ss_pred cccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC----ChhHHHHHHHHhhcCCCCcceeeeeEEEeC--CeEEEEEe
Q 040826 68 DWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLVCLFGCCVEG--GEQYLVYE 140 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e 140 (347)
|...+.||.|++|.||+|... +|+.+++|.+.... ....+.+|+++++.++|+|++++++++... +..++++|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 345678999999999999965 58899999997653 234678899999999999999999999887 79999999
Q ss_pred ecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccc
Q 040826 141 FCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220 (347)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 220 (347)
|+++ +|.+++......+++..++.++.|+++|+.||| +.+++|+||+|+||++++++.++++|||.+.........
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH---~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~ 156 (287)
T cd07840 81 YMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLH---SNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSA 156 (287)
T ss_pred cccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcc
Confidence 9986 899888766567999999999999999999999 789999999999999999999999999999876543322
Q ss_pred eeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCC-CcccccC----
Q 040826 221 VFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKR-PIKDFED---- 294 (347)
Q Consensus 221 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---- 294 (347)
......++..|+|||.+.+ ..++.++||||||+++|+|++|+.||..... ................ ......+
T Consensus 157 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T cd07840 157 DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTE-LEQLEKIFELCGSPTDENWPGVSKLPWF 235 (287)
T ss_pred cccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCchhhccccccchhh
Confidence 2333456788999997765 4678999999999999999999999875432 2222222211110000 0000000
Q ss_pred ----------CCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 295 ----------PRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 295 ----------~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
..+.......+...+.+++.+||+.+|.+|||+.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 236 ENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred hhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 00000011112567899999999999999999999876
No 307
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=7.1e-39 Score=278.02 Aligned_cols=245 Identities=24% Similarity=0.293 Sum_probs=199.1
Q ss_pred CcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC-----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEe
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN-----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYE 140 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 140 (347)
+|...+.||.|+||.||+|... ++..+++|.+.... ....+.+|++.+++++||||+++++++.+....++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4667788999999999999965 68999999886532 34578899999999999999999999999999999999
Q ss_pred ecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccc
Q 040826 141 FCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220 (347)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 220 (347)
|+.+++|.+++... ..+++..+..++.|+++||.||| +.+++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-- 154 (258)
T cd05578 81 LLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT-- 154 (258)
T ss_pred CCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc--
Confidence 99999999998655 56899999999999999999999 7899999999999999999999999999988654321
Q ss_pred eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCC
Q 040826 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGN 300 (347)
Q Consensus 221 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 300 (347)
......++..|+|||.+.+..++.++|+||||+++|+|++|..|+...... .............. .
T Consensus 155 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~------------~ 220 (258)
T cd05578 155 LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT--IRDQIRAKQETADV------------L 220 (258)
T ss_pred cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc--HHHHHHHHhccccc------------c
Confidence 223456788999999998888999999999999999999999998754321 11111111111111 1
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCH--HHHH
Q 040826 301 INRADFESILKIAVLCVAKSSKGRPTI--DVVY 331 (347)
Q Consensus 301 ~~~~~~~~l~~l~~~cl~~~p~~Rps~--~ei~ 331 (347)
.+......+.+++.+||+.||.+||++ .|++
T Consensus 221 ~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 221 YPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred CcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 112233679999999999999999999 5554
No 308
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-39 Score=298.43 Aligned_cols=251 Identities=27% Similarity=0.428 Sum_probs=206.3
Q ss_pred CCeeeecCCeeEEEEE-eCCCC----EEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeec
Q 040826 71 RRFLGRGSAGLVYKGV-LPSGQ----VVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFC 142 (347)
Q Consensus 71 ~~~lg~G~~g~V~~~~-~~~~~----~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 142 (347)
..+||+|+||+||+|. .+.|+ +||+|++..... ..++..|...|.++.|||++++++++.... ..||++|+
T Consensus 701 ~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~m 779 (1177)
T KOG1025|consen 701 DKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQLM 779 (1177)
T ss_pred hceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHhc
Confidence 4679999999999999 45554 688998876433 467999999999999999999999998765 88999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccc-e
Q 040826 143 AAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK-V 221 (347)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~-~ 221 (347)
+.|+|.|+++.+...+.....+.|..|||+||.||| .+.++||||..+|||+..-..+|++|||+++....+... .
T Consensus 780 P~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe---~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~ 856 (1177)
T KOG1025|consen 780 PLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLE---EQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYS 856 (1177)
T ss_pred ccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH---hcchhhhhhhhhheeecCCCeEEEEecchhhccCccccccc
Confidence 999999999988888999999999999999999999 899999999999999999999999999999987543222 2
Q ss_pred eecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCC
Q 040826 222 FTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGN 300 (347)
Q Consensus 222 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 300 (347)
.....-++.|||=|.+....|+.++|||||||++||++| |..|+.. ...++ +... +..+++ -.
T Consensus 857 ~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~g-i~~~e-I~dl---le~geR-----------Ls 920 (1177)
T KOG1025|consen 857 APGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDG-IPAEE-IPDL---LEKGER-----------LS 920 (1177)
T ss_pred ccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCC-CCHHH-hhHH---Hhcccc-----------CC
Confidence 233345778999999999999999999999999999998 6666653 22211 1111 111211 13
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 040826 301 INRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWKNT 341 (347)
Q Consensus 301 ~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~~~ 341 (347)
.++.+.-+++.++.+||..|++.||+++++...+..+.++.
T Consensus 921 qPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardp 961 (1177)
T KOG1025|consen 921 QPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDP 961 (1177)
T ss_pred CCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCc
Confidence 34456678999999999999999999999999999887653
No 309
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=7.4e-38 Score=273.03 Aligned_cols=246 Identities=22% Similarity=0.260 Sum_probs=190.4
Q ss_pred HHHhcCcccCCee--eecCCeeEEEEEe-CCCCEEEEEEcccCCChhHHHHHHHHhhcC-CCCcceeeeeEEEeCCeEEE
Q 040826 62 ENAINNDWDRRFL--GRGSAGLVYKGVL-PSGQVVAIKHIYKSNNTDSFSREVEGLSRV-RHPNLVCLFGCCVEGGEQYL 137 (347)
Q Consensus 62 ~~~~~~~~~~~~l--g~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 137 (347)
....++|...+.+ |+|+||.||++.. .++..+++|.+....... .|......+ +|||++++++.+...+..++
T Consensus 10 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~---~e~~~~~~~~~h~~iv~~~~~~~~~~~~~i 86 (267)
T PHA03390 10 VQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA---IEPMVHQLMKDNPNFIKLYYSVTTLKGHVL 86 (267)
T ss_pred HHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch---hhHHHHHHhhcCCCEEEEEEEEecCCeeEE
Confidence 3345566666666 9999999999995 468889999886542221 122222222 69999999999999999999
Q ss_pred EEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCC-ceEEeecccceecCC
Q 040826 138 VYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKL-EPKLSDFGLAKMLGM 216 (347)
Q Consensus 138 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~-~~kl~dfg~~~~~~~ 216 (347)
||||+++++|.+++.... .+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++ .++++|||.+.....
T Consensus 87 v~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~ 162 (267)
T PHA03390 87 IMDYIKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDLH---KHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGT 162 (267)
T ss_pred EEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCC
Confidence 999999999999986554 7899999999999999999999 78999999999999999998 999999999876532
Q ss_pred CccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCC
Q 040826 217 EESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPR 296 (347)
Q Consensus 217 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (347)
. ....++..|+|||.+.+..++.++|+||||+++|+|++|+.||.......-....+.... ....
T Consensus 163 ~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~--------- 227 (267)
T PHA03390 163 P-----SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QKKL--------- 227 (267)
T ss_pred C-----ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-cccC---------
Confidence 2 223578899999999988899999999999999999999999974432221222222221 1110
Q ss_pred CCCCCCHHHHHHHHHHHHHhccCCCCCCCC-HHHHHH
Q 040826 297 LNGNINRADFESILKIAVLCVAKSSKGRPT-IDVVYE 332 (347)
Q Consensus 297 l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps-~~ei~~ 332 (347)
.........+.+++.+||+.+|.+||+ ++++++
T Consensus 228 ---~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 228 ---PFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred ---CcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 011133457999999999999999996 688874
No 310
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=3e-38 Score=273.61 Aligned_cols=246 Identities=29% Similarity=0.403 Sum_probs=201.5
Q ss_pred CcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
+|...+.||+|++|.||++... ++..+++|.+.... ....+.+|++.++.++|||++++.+.+......++++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4666788999999999999964 68899999987543 335688899999999999999999999999999999999
Q ss_pred cCCCChHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCc
Q 040826 142 CAAGNLAQHLLRK---DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE 218 (347)
Q Consensus 142 ~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 218 (347)
+++++|.+++... +..+++..+..++.|++.|+.+|| +.|++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh---~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH---SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 9999999998654 467999999999999999999999 7899999999999999999999999999988764322
Q ss_pred cceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCC
Q 040826 219 SKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLN 298 (347)
Q Consensus 219 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 298 (347)
.......++..|+|||...+..++.++|+||+|+++++|++|..|+..... ............+
T Consensus 158 -~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~---------- 221 (258)
T cd08215 158 -DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL-----LELALKILKGQYP---------- 221 (258)
T ss_pred -ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH-----HHHHHHHhcCCCC----------
Confidence 223334678899999999888899999999999999999999999864321 1111111111110
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 299 GNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 299 ~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
..+......+.+++.+||..+|++|||+.++++
T Consensus 222 -~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 222 -PIPSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred -CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 111123357899999999999999999999986
No 311
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.5e-38 Score=280.53 Aligned_cols=250 Identities=27% Similarity=0.359 Sum_probs=192.1
Q ss_pred cccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCCC---hhHHHHHHHHhhcCC-CCcceeeeeEEEeCCeEEEEEeec
Q 040826 68 DWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNN---TDSFSREVEGLSRVR-HPNLVCLFGCCVEGGEQYLVYEFC 142 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~ 142 (347)
|...+.||+|+||.||++.. .+|+.+|+|.+..... ...+.+|+..+.++. |+||+++++++...+..+++|||+
T Consensus 6 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~ 85 (288)
T cd06616 6 LKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELM 85 (288)
T ss_pred hHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecc
Confidence 34456799999999999995 4689999998875432 346788999999996 999999999999888999999998
Q ss_pred CCCChHHHhh----cCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCc
Q 040826 143 AAGNLAQHLL----RKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE 218 (347)
Q Consensus 143 ~~gsL~~~l~----~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 218 (347)
.. ++.++.. .....+++..+..++.|++.||.|||+ ..+++||||||+||+++.++.++|+|||++......
T Consensus 86 ~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~- 161 (288)
T cd06616 86 DI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS- 161 (288)
T ss_pred cC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh--cCCeeccCCCHHHEEEccCCcEEEeecchhHHhccC-
Confidence 75 6655432 233568999999999999999999994 358999999999999999999999999998764322
Q ss_pred cceeecccCCCCccccccccCC---ccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCC
Q 040826 219 SKVFTDVRGTIGYMDPEYMTNA---KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDP 295 (347)
Q Consensus 219 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (347)
.......++..|+|||.+.+. .++.++||||||+++|+|++|+.||...... .........+.. +
T Consensus 162 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~~~~-------~ 229 (288)
T cd06616 162 -IAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSV----FDQLTQVVKGDP-------P 229 (288)
T ss_pred -CccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchH----HHHHhhhcCCCC-------C
Confidence 112233578899999998765 6889999999999999999999998643211 111111111111 1
Q ss_pred CCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 296 RLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 296 ~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
.+..........++.+|+.+||+.+|.+|||+.+|++.
T Consensus 230 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 230 ILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred cCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11111112344679999999999999999999999874
No 312
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=3.8e-38 Score=276.93 Aligned_cols=257 Identities=23% Similarity=0.255 Sum_probs=192.5
Q ss_pred cccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC---ChhHHHHHHHHhhcCC-CCcceeeeeEEEeC--CeEEEEEe
Q 040826 68 DWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN---NTDSFSREVEGLSRVR-HPNLVCLFGCCVEG--GEQYLVYE 140 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~--~~~~lv~e 140 (347)
|...+.||+|+||.||+|.. .+++.+|+|.+.... ......+|+..++++. |+|++++++++.+. +..++|+|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 34567899999999999995 468899999886532 2224457888888885 99999999999887 88999999
Q ss_pred ecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccc
Q 040826 141 FCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220 (347)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 220 (347)
|+++ +|.+.+......+++..++.++.|++.||.||| +.+++|+||+|+||+++. +.++|+|||++.......
T Consensus 81 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~-- 153 (282)
T cd07831 81 LMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMH---RNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKP-- 153 (282)
T ss_pred cCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEcC-CCeEEEecccccccccCC--
Confidence 9975 888888765567899999999999999999999 789999999999999999 999999999998653221
Q ss_pred eeecccCCCCcccccccc-CCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCC---------Ccc
Q 040826 221 VFTDVRGTIGYMDPEYMT-NAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKR---------PIK 290 (347)
Q Consensus 221 ~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 290 (347)
......++..|+|||.+. +..++.++|+||||+++|+|++|..||....... .............. ...
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (282)
T cd07831 154 PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELD-QIAKIHDVLGTPDAEVLKKFRKSRHM 232 (282)
T ss_pred CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHH-HHHHHHHHcCCCCHHHHHhhcccccc
Confidence 122345788999999764 4567889999999999999999999996543211 11111111000000 000
Q ss_pred cccCCCCCC----CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 291 DFEDPRLNG----NINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 291 ~~~~~~l~~----~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
.+..+...+ .........+.+++.+||+++|.+|||+.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 233 NYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred cccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 111111000 011233578999999999999999999999986
No 313
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=3e-38 Score=277.73 Aligned_cols=259 Identities=25% Similarity=0.342 Sum_probs=200.5
Q ss_pred cccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC----hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeec
Q 040826 68 DWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN----TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFC 142 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 142 (347)
|...+.||+|++|.||++... +|+.+++|.+..... ...+.+|++.+++++|+|++++++++.+++..++++||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 345678999999999999964 788999998865432 346788999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcccee
Q 040826 143 AAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVF 222 (347)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 222 (347)
++ +|.+++......+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||.+....... ...
T Consensus 81 ~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~-~~~ 155 (283)
T cd05118 81 DT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCH---SHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV-RPY 155 (283)
T ss_pred CC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHH---HCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-ccc
Confidence 86 898888766567999999999999999999999 8899999999999999999999999999988765332 122
Q ss_pred ecccCCCCccccccccCC-ccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCC-cccccC------
Q 040826 223 TDVRGTIGYMDPEYMTNA-KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRP-IKDFED------ 294 (347)
Q Consensus 223 ~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------ 294 (347)
....++..|+|||.+.+. .++.++|+||||+++|+|++|+.||..... .+.+............. ...+.+
T Consensus 156 ~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd05118 156 THYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSE-IDQLFKIFRTLGTPDPEVWPKFTSLARNYK 234 (283)
T ss_pred cCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHcCCCchHhcccchhhhhhhh
Confidence 334578889999998876 788999999999999999999998865432 22222222211111000 000000
Q ss_pred ---CCCC----CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 295 ---PRLN----GNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 295 ---~~l~----~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
+... .........++.+++.+||+.||.+||++.+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 235 FSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 0000 0112234578999999999999999999999975
No 314
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=2.6e-38 Score=278.19 Aligned_cols=258 Identities=23% Similarity=0.333 Sum_probs=195.1
Q ss_pred cccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeec
Q 040826 68 DWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFC 142 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 142 (347)
|...+.||.|++|.||+|... +|..|++|++.... ....+.+|++.+++++|||++++++++.+.+..++++||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 445678999999999999954 78999999886542 2246788999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccce
Q 040826 143 AAGNLAQHLLRKD-SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKV 221 (347)
Q Consensus 143 ~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 221 (347)
+ ++|.+++.... ..+++..++.++.|+++||+||| +.+++|+||+|+||+++.++.++|+|||.+....... ..
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH---~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~-~~ 155 (283)
T cd07835 81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCH---SHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV-RT 155 (283)
T ss_pred C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc-cc
Confidence 6 59999886543 46899999999999999999999 7899999999999999999999999999987653221 11
Q ss_pred eecccCCCCccccccccCC-ccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCC-------------
Q 040826 222 FTDVRGTIGYMDPEYMTNA-KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKR------------- 287 (347)
Q Consensus 222 ~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~------------- 287 (347)
.....++..|+|||.+.+. .++.++|+||||+++|+|++|+.||........ .....+.......
T Consensus 156 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd07835 156 YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQ-LFRIFRTLGTPDEDVWPGVTSLPDYK 234 (283)
T ss_pred cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCChHHhhhhhhchhhh
Confidence 2223468899999988654 578899999999999999999999875433221 1111111100000
Q ss_pred -CcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 288 -PIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 288 -~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
.......+.. ..........+.+++.+||+.+|.+|||+.++++
T Consensus 235 ~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 235 PTFPKWARQDL-SKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhcccccccch-hhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0000000000 0111122357889999999999999999999975
No 315
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-39 Score=294.80 Aligned_cols=242 Identities=26% Similarity=0.320 Sum_probs=200.9
Q ss_pred eeeecCCeeEEEEEeC-CCCEEEEEEcccCC--ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCCCChHH
Q 040826 73 FLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN--NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQ 149 (347)
Q Consensus 73 ~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~ 149 (347)
.||+|.||+||.|+.. +...+|||-+.... ..+-+..|+.+.++++|.|||+++|.+..++.+-+.||-.+||+|.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 5999999999999954 56689999987543 34567889999999999999999999999999999999999999999
Q ss_pred HhhcCCCCC--CHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecC-CCceEEeecccceecCCCccceeeccc
Q 040826 150 HLLRKDSVL--TWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTE-KLEPKLSDFGLAKMLGMEESKVFTDVR 226 (347)
Q Consensus 150 ~l~~~~~~~--~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~ 226 (347)
++..+=+++ ++...--+.+||++||.||| .+.|+|||||.+|+||+. .|.+||+|||.++.+. .-...+..+.
T Consensus 662 LLrskWGPlKDNEstm~fYtkQILeGLkYLH---en~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLA-ginP~TETFT 737 (1226)
T KOG4279|consen 662 LLRSKWGPLKDNESTMNFYTKQILEGLKYLH---ENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLA-GINPCTETFT 737 (1226)
T ss_pred HHHhccCCCccchhHHHHHHHHHHHHhhhhh---hcceeeccccCCcEEEeeccceEEecccccchhhc-cCCccccccc
Confidence 998765566 77888889999999999999 889999999999999974 7899999999988764 3345566788
Q ss_pred CCCCccccccccCC--ccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHH
Q 040826 227 GTIGYMDPEYMTNA--KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRA 304 (347)
Q Consensus 227 ~~~~y~aPE~~~~~--~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 304 (347)
||..|||||++..+ .|..++|||||||++.||.||++||.--.. .+.....-++.. .. .+++.+
T Consensus 738 GTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgs--pqAAMFkVGmyK--------vH----P~iPee 803 (1226)
T KOG4279|consen 738 GTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGS--PQAAMFKVGMYK--------VH----PPIPEE 803 (1226)
T ss_pred cchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCC--hhHhhhhhccee--------cC----CCCcHH
Confidence 99999999999754 689999999999999999999999963211 111111111111 11 256778
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 305 DFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 305 ~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
..++...++.+|+.+||.+||++.+++.
T Consensus 804 lsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 804 LSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred HHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 8889999999999999999999999875
No 316
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=2.1e-38 Score=280.21 Aligned_cols=248 Identities=26% Similarity=0.395 Sum_probs=199.1
Q ss_pred cCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC--ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeec
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN--NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFC 142 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 142 (347)
.+|...+.||+|+||.||++.. .++..+++|.+.... ..+.+.+|+..++.++|||++++++.+...+..++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 5677788999999999999985 468899999885432 3456888999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcccee
Q 040826 143 AAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVF 222 (347)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 222 (347)
++++|.+++.+. .+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.++|+|||++........ ..
T Consensus 99 ~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH---~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~-~~ 172 (293)
T cd06647 99 AGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-KR 172 (293)
T ss_pred CCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---hCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccc-cc
Confidence 999999988543 4788999999999999999999 88999999999999999999999999998876542221 22
Q ss_pred ecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCC
Q 040826 223 TDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNIN 302 (347)
Q Consensus 223 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 302 (347)
....++..|+|||.+.+..++.++|+||||+++|++++|+.||........ ... ......+ .. ...
T Consensus 173 ~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~-~~~----~~~~~~~-------~~--~~~ 238 (293)
T cd06647 173 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-LYL----IATNGTP-------EL--QNP 238 (293)
T ss_pred ccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh-eee----hhcCCCC-------CC--CCc
Confidence 334578899999999888899999999999999999999999974322111 110 0001100 00 111
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 303 RADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 303 ~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
......+.+++.+||+.+|++||++.+++.+
T Consensus 239 ~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 239 EKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1233578899999999999999999999865
No 317
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.6e-39 Score=284.12 Aligned_cols=249 Identities=25% Similarity=0.385 Sum_probs=194.7
Q ss_pred cCcccCCeeeecCCeeEEEEEeCCCCEEEEEEcccC-CC---hhHHHHHHHHhhcCC-CCcceeeeeEEEeCCeEEEEEe
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKS-NN---TDSFSREVEGLSRVR-HPNLVCLFGCCVEGGEQYLVYE 140 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~-~~---~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e 140 (347)
..|...++||+||.+.||++...+.+.+|+|++... .+ ...|.+|+..|.+++ |.+|+.++++-..++.+|+|||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE 440 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME 440 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence 456677889999999999999888888888877542 22 346999999999995 9999999999999999999999
Q ss_pred ecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccc
Q 040826 141 FCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220 (347)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 220 (347)
|-+. +|...|.+.....+.-.+..+..|+++++.++| ..||||.||||.|+|+-+ |.+||+|||.|.....+...
T Consensus 441 ~Gd~-DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH---~~gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~DTTs 515 (677)
T KOG0596|consen 441 CGDI-DLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIH---QHGIVHSDLKPANFLLVK-GRLKLIDFGIANAIQPDTTS 515 (677)
T ss_pred cccc-cHHHHHHhccCCCchHHHHHHHHHHHHHHHHHH---HhceeecCCCcccEEEEe-eeEEeeeechhcccCccccc
Confidence 9876 999999876655554478889999999999999 889999999999999885 59999999999877544332
Q ss_pred -eeecccCCCCccccccccCC-----------ccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCC
Q 040826 221 -VFTDVRGTIGYMDPEYMTNA-----------KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRP 288 (347)
Q Consensus 221 -~~~~~~~~~~y~aPE~~~~~-----------~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 288 (347)
.....+||..||+||.+... +.+.++||||||||||+|+.|++||..-... ......+....
T Consensus 516 I~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~----~aKl~aI~~P~-- 589 (677)
T KOG0596|consen 516 IVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQ----IAKLHAITDPN-- 589 (677)
T ss_pred eeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHH----HHHHHhhcCCC--
Confidence 24557899999999988432 2668999999999999999999999732211 11111222111
Q ss_pred cccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 289 IKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 289 ~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
.++..|..... .++.++|+.||+.||.+|||+.|+++
T Consensus 590 -~~Iefp~~~~~------~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 590 -HEIEFPDIPEN------DELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred -ccccccCCCCc------hHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 11122222111 23999999999999999999999985
No 318
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=5.3e-38 Score=284.87 Aligned_cols=260 Identities=23% Similarity=0.306 Sum_probs=197.0
Q ss_pred HhcCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC----ChhHHHHHHHHhhcCCCCcceeeeeEEEeC------
Q 040826 64 AINNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLVCLFGCCVEG------ 132 (347)
Q Consensus 64 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------ 132 (347)
..++|...+.||+|+||.||+|.. .+|+.||+|.+.... ....+.+|+.++++++|+|++++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 457788889999999999999995 478999999986432 234577899999999999999999987643
Q ss_pred CeEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccce
Q 040826 133 GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAK 212 (347)
Q Consensus 133 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~ 212 (347)
...++|+||+.+ +|.+.+... ++...+..++.|++.||.||| +.|++|+||||+||+++.++.++|+|||++.
T Consensus 94 ~~~~lv~e~~~~-~l~~~~~~~---l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~ 166 (353)
T cd07850 94 QDVYLVMELMDA-NLCQVIQMD---LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 166 (353)
T ss_pred CcEEEEEeccCC-CHHHHHhhc---CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCccce
Confidence 357999999976 888877432 888999999999999999999 7899999999999999999999999999998
Q ss_pred ecCCCccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcC--------
Q 040826 213 MLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSM-------- 284 (347)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~-------- 284 (347)
..... .......++..|+|||.+.+..++.++||||||+++|+|++|+.||..... .............
T Consensus 167 ~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~ 243 (353)
T cd07850 167 TAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDH-IDQWNKIIEQLGTPSDEFMSR 243 (353)
T ss_pred eCCCC--CCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHHhcCCCCHHHHHH
Confidence 75422 112334578899999999999999999999999999999999999864321 1111111111000
Q ss_pred ----------CC-----CCccccc----CCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 285 ----------GK-----RPIKDFE----DPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 285 ----------~~-----~~~~~~~----~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
.. .+..... .+...........+.+.+++.+||+.||.+|||+.|+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 244 LQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred hhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00 0000000 0000111112335678999999999999999999999864
No 319
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=3.8e-38 Score=276.40 Aligned_cols=241 Identities=22% Similarity=0.261 Sum_probs=190.8
Q ss_pred eeecCCeeEEEEEeC-CCCEEEEEEcccCC-----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCCCCh
Q 040826 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSN-----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNL 147 (347)
Q Consensus 74 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 147 (347)
||+|+||.||++... +|+.+++|.+.... ....+..|+.+++.++|||++++++.+...+..++|+||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999854 68899999886432 233567899999999999999999999999999999999999999
Q ss_pred HHHhhcCC-CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeeccc
Q 040826 148 AQHLLRKD-SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVR 226 (347)
Q Consensus 148 ~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 226 (347)
.+++.... ..+++..+..++.|++.|+.||| +.+++|+||+|+||++++++.++|+|||.+..... ........
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~--~~~~~~~~ 155 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLH---QRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKG--GKKIKGRA 155 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEccCcchhhhcc--CCcccccc
Confidence 99986543 46899999999999999999999 88999999999999999999999999998876432 22223345
Q ss_pred CCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHH
Q 040826 227 GTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADF 306 (347)
Q Consensus 227 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 306 (347)
++..|+|||.+.+..++.++|+||||+++++|++|+.||........ ............. ..+....
T Consensus 156 ~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~------------~~~~~~~ 222 (277)
T cd05577 156 GTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVE-KEELKRRTLEMAV------------EYPDKFS 222 (277)
T ss_pred CCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccccc-HHHHHhccccccc------------cCCccCC
Confidence 78899999999888899999999999999999999999865432111 1111111111110 1111224
Q ss_pred HHHHHHHHHhccCCCCCCC-----CHHHHHH
Q 040826 307 ESILKIAVLCVAKSSKGRP-----TIDVVYE 332 (347)
Q Consensus 307 ~~l~~l~~~cl~~~p~~Rp-----s~~ei~~ 332 (347)
..+.+++.+||+.||.+|| ++.++++
T Consensus 223 ~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 223 PEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred HHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 5789999999999999999 5555654
No 320
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=5.4e-38 Score=276.31 Aligned_cols=260 Identities=22% Similarity=0.320 Sum_probs=197.1
Q ss_pred CcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC---ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeec
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN---NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFC 142 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 142 (347)
+|...+.||.|++|.||+|... +|..|++|.+.... ....+.+|+.++++++|+|++++++++.+.+..++|+||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 4667789999999999999964 68899999886542 2346778999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCC--CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccc
Q 040826 143 AAGNLAQHLLRKD--SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220 (347)
Q Consensus 143 ~~gsL~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 220 (347)
++ +|.+++.... ..+++..+..++.|++.||.||| +.+++|+||+|+||++++++.++++|||++...... ..
T Consensus 81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~-~~ 155 (284)
T cd07836 81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCH---ENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIP-VN 155 (284)
T ss_pred Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCC-cc
Confidence 86 8988886543 56899999999999999999999 789999999999999999999999999998754322 11
Q ss_pred eeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCC-Cc------ccc
Q 040826 221 VFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKR-PI------KDF 292 (347)
Q Consensus 221 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~ 292 (347)
......++..|++||.+.+ ..++.++|+||||+++|+|++|+.||...... +.............. .. ..+
T Consensus 156 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07836 156 TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNE-DQLLKIFRIMGTPTESTWPGISQLPEY 234 (284)
T ss_pred ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHHhCCCChhhHHHHhcCchh
Confidence 2223456889999998865 45788999999999999999999998754322 222221111100000 00 000
Q ss_pred c--CCCC----CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 293 E--DPRL----NGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 293 ~--~~~l----~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
. .+.. ...+.......+.+++.+||+.||++||++.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 235 KPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred cccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0 0000 00111123467889999999999999999999875
No 321
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=4.1e-38 Score=278.81 Aligned_cols=251 Identities=24% Similarity=0.374 Sum_probs=193.9
Q ss_pred hcCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC---hhHHHHHHHHhhcCC-CCcceeeeeEEEeCCeEEEEE
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN---TDSFSREVEGLSRVR-HPNLVCLFGCCVEGGEQYLVY 139 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 139 (347)
.++|...+.||+|++|.||+|... +++.||+|.+..... ...+..|+..+.+.. |+||+++++++.+....+++|
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 355677789999999999999976 489999999875432 234666777666665 999999999999999999999
Q ss_pred eecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcc
Q 040826 140 EFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES 219 (347)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 219 (347)
||+.+ +|.+++......+++..+..++.|++.|++|||+ ..+++|+||+|+||++++++.++|+|||++.......
T Consensus 94 e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~--~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~- 169 (296)
T cd06618 94 ELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKE--KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK- 169 (296)
T ss_pred eccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh--hCCEecCCCcHHHEEEcCCCCEEECccccchhccCCC-
Confidence 99865 7877776655678999999999999999999994 2589999999999999999999999999987653221
Q ss_pred ceeecccCCCCccccccccCCc----cCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCC
Q 040826 220 KVFTDVRGTIGYMDPEYMTNAK----LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDP 295 (347)
Q Consensus 220 ~~~~~~~~~~~y~aPE~~~~~~----~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (347)
......++..|+|||.+.+.. ++.++|+||||+++|+|++|+.||.......+.+...... ..+. ...
T Consensus 170 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~----~~~~--~~~- 241 (296)
T cd06618 170 -AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQE----EPPS--LPP- 241 (296)
T ss_pred -cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcC----CCCC--CCC-
Confidence 122335778999999987543 7889999999999999999999986432222222222111 1110 000
Q ss_pred CCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 296 RLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 296 ~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
.....+++.+++.+||+.||.+|||+.++++.
T Consensus 242 ------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 242 ------NEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred ------CCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00223579999999999999999999999765
No 322
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=6.3e-38 Score=272.70 Aligned_cols=240 Identities=25% Similarity=0.309 Sum_probs=193.2
Q ss_pred eeecCCeeEEEEEeC-CCCEEEEEEcccCC-----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCCCCh
Q 040826 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSN-----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNL 147 (347)
Q Consensus 74 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 147 (347)
||.|++|.||++... +++.+++|.+.... ....+.+|+.+++.++||||+++++.+.++...++++||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999964 58899999986532 234688899999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeecccC
Q 040826 148 AQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRG 227 (347)
Q Consensus 148 ~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 227 (347)
.+++.+. ..+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||.+....... ......+
T Consensus 81 ~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lH---~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--~~~~~~~ 154 (262)
T cd05572 81 WTILRDR-GLFDEYTARFYIACVVLAFEYLH---NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--KTWTFCG 154 (262)
T ss_pred HHHHhhc-CCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--ccccccC
Confidence 9998654 34899999999999999999999 8899999999999999999999999999988764321 2223457
Q ss_pred CCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHH
Q 040826 228 TIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFE 307 (347)
Q Consensus 228 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 307 (347)
+..|++||.+.+..++.++|+||||+++|+|++|..||....... .........+... ...+.....
T Consensus 155 ~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~----------~~~~~~~~~ 221 (262)
T cd05572 155 TPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP---MEIYNDILKGNGK----------LEFPNYIDK 221 (262)
T ss_pred CcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH---HHHHHHHhccCCC----------CCCCcccCH
Confidence 889999999988889999999999999999999999997543211 1111111111100 011111246
Q ss_pred HHHHHHHHhccCCCCCCCC-----HHHHHH
Q 040826 308 SILKIAVLCVAKSSKGRPT-----IDVVYE 332 (347)
Q Consensus 308 ~l~~l~~~cl~~~p~~Rps-----~~ei~~ 332 (347)
++.+++.+||+.+|++||+ ++|+++
T Consensus 222 ~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 222 AAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred HHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 7999999999999999999 677665
No 323
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=6.5e-38 Score=279.21 Aligned_cols=260 Identities=25% Similarity=0.339 Sum_probs=193.9
Q ss_pred hcCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC----hhHHHHHHHHhhcCCCCcceeeeeEEEeCC------
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN----TDSFSREVEGLSRVRHPNLVCLFGCCVEGG------ 133 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 133 (347)
.++|...+.||+|+||.||+|... +++.||+|.+..... ...+.+|+.++++++||||+++++++....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 457888899999999999999954 689999998864322 224568999999999999999999887543
Q ss_pred --eEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccc
Q 040826 134 --EQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLA 211 (347)
Q Consensus 134 --~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~ 211 (347)
..++||||+.+ +|.+.+......+++..++.++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++
T Consensus 91 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~ 166 (310)
T cd07865 91 KGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIH---RNKILHRDMKAANILITKDGILKLADFGLA 166 (310)
T ss_pred CceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEECCCCcEEECcCCCc
Confidence 45999999976 888888666557899999999999999999999 789999999999999999999999999999
Q ss_pred eecCCCccc---eeecccCCCCccccccccCC-ccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCC
Q 040826 212 KMLGMEESK---VFTDVRGTIGYMDPEYMTNA-KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKR 287 (347)
Q Consensus 212 ~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 287 (347)
......... ......++..|+|||.+.+. .++.++|+||||+++|+|++|..||...... ...............
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~-~~~~~~~~~~~~~~~ 245 (310)
T cd07865 167 RAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQ-HQLTLISQLCGSITP 245 (310)
T ss_pred ccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCh
Confidence 865422211 12234567889999988664 4788999999999999999999988754322 111111110000000
Q ss_pred C-ccc------------------ccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 288 P-IKD------------------FEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 288 ~-~~~------------------~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
. ... .....+... .....+.+++.+||+.||.+|||++++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 246 EVWPGVDKLELFKKMELPQGQKRKVKERLKPY---VKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred hhcccccchhhhhhccCCCccchhhHHhcccc---cCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 0 000 000000000 11246789999999999999999999975
No 324
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.3e-37 Score=278.20 Aligned_cols=262 Identities=24% Similarity=0.292 Sum_probs=194.5
Q ss_pred CcccCCeeeecCCeeEEEEEeC---CCCEEEEEEcccC-----CChhHHHHHHHHhhcCCCCcceeeeeEEEeC--CeEE
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP---SGQVVAIKHIYKS-----NNTDSFSREVEGLSRVRHPNLVCLFGCCVEG--GEQY 136 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~ 136 (347)
+|...+.||+|++|.||+|... ++..||+|.+... .....+.+|+.++++++|||++++++++.+. ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 3666788999999999999964 4789999998763 2345678899999999999999999999987 7899
Q ss_pred EEEeecCCCChHHHhhc----CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecC----CCceEEeec
Q 040826 137 LVYEFCAAGNLAQHLLR----KDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTE----KLEPKLSDF 208 (347)
Q Consensus 137 lv~e~~~~gsL~~~l~~----~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~----~~~~kl~df 208 (347)
+||||+++ +|.+.+.. ....+++..+..++.|++.||.||| +.+++|+||+|+||+++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLH---SNWVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999986 77776642 1236899999999999999999999 889999999999999999 999999999
Q ss_pred ccceecCCCcc--ceeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhh--------hHHHH
Q 040826 209 GLAKMLGMEES--KVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDAR--------DQLTR 277 (347)
Q Consensus 209 g~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~--------~~~~~ 277 (347)
|++........ .......++..|+|||.+.+ ..++.++|+||||+++++|++|+.||....... ..+..
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99886543221 11223457888999998876 457889999999999999999999997543221 11111
Q ss_pred HHhhhcCCCC----------Cccc----ccCCCCC-----CCCCH--HHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 278 KARDVSMGKR----------PIKD----FEDPRLN-----GNINR--ADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 278 ~~~~~~~~~~----------~~~~----~~~~~l~-----~~~~~--~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
.......... .... ....... ..... ....++.+++.+||+.||.+|||+.|+++
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 1111110000 0000 0000000 00000 23357899999999999999999999975
No 325
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=6.3e-38 Score=271.51 Aligned_cols=244 Identities=26% Similarity=0.348 Sum_probs=199.2
Q ss_pred CcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
+|...+.||+|++|.||++... +++.+++|.+.... ....+.+|+..++.++|+||+++.+++.+....++++||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 3666788999999999999844 78899999886532 234677899999999999999999999999999999999
Q ss_pred cCCCChHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCc
Q 040826 142 CAAGNLAQHLLR---KDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE 218 (347)
Q Consensus 142 ~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 218 (347)
+++++|.+++.+ ....+++..++.++.|++.|+.||| +.|++|+||+|+||++++++.++++|||++......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh---~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH---EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 999999998854 2356899999999999999999999 889999999999999999999999999998876432
Q ss_pred cceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCC
Q 040826 219 SKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLN 298 (347)
Q Consensus 219 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 298 (347)
......++..|+|||...+..++.++|+||||+++++|++|+.||....... .. .....+..+
T Consensus 157 --~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~--~~---~~~~~~~~~---------- 219 (256)
T cd08530 157 --MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD--LR---YKVQRGKYP---------- 219 (256)
T ss_pred --CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HH---HHHhcCCCC----------
Confidence 2223457889999999999889999999999999999999999987543211 11 111111110
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 299 GNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 299 ~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
........++.+++.+||+.+|++|||+.++++
T Consensus 220 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 220 -PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred -CCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 112234467999999999999999999999975
No 326
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=1.1e-37 Score=275.81 Aligned_cols=261 Identities=22% Similarity=0.311 Sum_probs=194.4
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEe
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYE 140 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 140 (347)
++|...+.||+|++|.||+|... +|+.|++|.+.... ....+.+|++.+++++|||++++++++.+....++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 46777889999999999999964 78899999886532 23467889999999999999999999999999999999
Q ss_pred ecCCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecC-CCceEEeecccceecCCCc
Q 040826 141 FCAAGNLAQHLLRKD-SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTE-KLEPKLSDFGLAKMLGMEE 218 (347)
Q Consensus 141 ~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~-~~~~kl~dfg~~~~~~~~~ 218 (347)
|+++ +|.+++.... ..+++..+..++.|++.||.||| +++++|+||+|+||+++. ++.+||+|||++......
T Consensus 82 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~- 156 (294)
T PLN00009 82 YLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCH---SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP- 156 (294)
T ss_pred cccc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCcceEEEECCCCEEEEcccccccccCCC-
Confidence 9975 8888775433 34678888999999999999999 789999999999999985 557999999999765322
Q ss_pred cceeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCC-------cc
Q 040826 219 SKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRP-------IK 290 (347)
Q Consensus 219 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 290 (347)
........++..|+|||.+.+ ..++.++|+||+|+++|+|+||..||...... +............... ..
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (294)
T PLN00009 157 VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEI-DELFKIFRILGTPNEETWPGVTSLP 235 (294)
T ss_pred ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCChhhccccccch
Confidence 111223456889999998865 46788999999999999999999998754322 2222211111110000 00
Q ss_pred ccc--CCCCCC----CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 291 DFE--DPRLNG----NINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 291 ~~~--~~~l~~----~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
... .+.... .......+++.+++.+|++.+|++||++.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 236 DYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred hhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 000000 001122356899999999999999999999986
No 327
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=2.6e-38 Score=285.06 Aligned_cols=262 Identities=23% Similarity=0.301 Sum_probs=194.2
Q ss_pred hcCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC---ChhHHHHHHHHhhcCCCCcceeeeeEEEeC-----CeE
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN---NTDSFSREVEGLSRVRHPNLVCLFGCCVEG-----GEQ 135 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~ 135 (347)
.++|...+.||+|+||.||+|.. .+|+.||+|.+.... ....+.+|+.++++++|+||+++++++... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 46788889999999999999984 478999999986432 234577899999999999999999887643 357
Q ss_pred EEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecC
Q 040826 136 YLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLG 215 (347)
Q Consensus 136 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 215 (347)
++++||+.+ +|.+.+. ...+++..+..++.|+++||.||| +.+++|+||||+||+++.++.++|+|||++....
T Consensus 84 ~lv~e~~~~-~l~~~~~--~~~l~~~~~~~i~~ql~~aL~~LH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 157 (336)
T cd07849 84 YIVQELMET-DLYKLIK--TQHLSNDHIQYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTNCDLKICDFGLARIAD 157 (336)
T ss_pred EEEehhccc-CHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEECcccceeecc
Confidence 999999976 8887774 345899999999999999999999 8899999999999999999999999999987654
Q ss_pred CCccc--eeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCC-Cccc
Q 040826 216 MEESK--VFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKR-PIKD 291 (347)
Q Consensus 216 ~~~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 291 (347)
..... ......++..|+|||.+.+ ..++.++||||||+++|+|++|+.||..... ................ ....
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~ 236 (336)
T cd07849 158 PEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDY-LHQLNLILGVLGTPSQEDLNC 236 (336)
T ss_pred ccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHcCCCCHHHHHH
Confidence 22111 1123457889999998754 5688999999999999999999999864321 1111111111100000 0000
Q ss_pred ccCC---------CCCCC-----CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 292 FEDP---------RLNGN-----INRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 292 ~~~~---------~l~~~-----~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
..+. ..... .......++.+++.+||+.+|++|||+.++++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 237 IISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred hhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000 00000 001123578999999999999999999999876
No 328
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-39 Score=279.57 Aligned_cols=245 Identities=24% Similarity=0.279 Sum_probs=202.1
Q ss_pred cCcccCCeeeecCCeeEEEEE-eCCCCEEEEEEcccC-----CChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKS-----NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVY 139 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 139 (347)
+.|..-+.||+||||.||-+. -.+|+.+|.|++.+. .......+|-.+|.+++.+.||.+--.|++.+.+|+|+
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL 264 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL 264 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence 456677899999999999998 458999999887543 45566889999999999999999999999999999999
Q ss_pred eecCCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCc
Q 040826 140 EFCAAGNLAQHLLRKD-SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE 218 (347)
Q Consensus 140 e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 218 (347)
..|.||+|.-++.+.+ +.+++..++-++++|+.||.+|| +.+|++|||||+|||+|+.|+++|+|.|+|..+. .
T Consensus 265 tlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH---~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~--~ 339 (591)
T KOG0986|consen 265 TLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLH---RRRIVYRDLKPENILLDDHGHVRISDLGLAVEIP--E 339 (591)
T ss_pred EeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHH---hcceeeccCChhheeeccCCCeEeeccceEEecC--C
Confidence 9999999999887644 56999999999999999999999 8899999999999999999999999999999874 3
Q ss_pred cceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCC
Q 040826 219 SKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLN 298 (347)
Q Consensus 219 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 298 (347)
.....+.+||.+|||||++.+..|+...|+|||||++|+|+.|..||......... .++-+.......
T Consensus 340 g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~-eEvdrr~~~~~~----------- 407 (591)
T KOG0986|consen 340 GKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKR-EEVDRRTLEDPE----------- 407 (591)
T ss_pred CCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhH-HHHHHHHhcchh-----------
Confidence 34445568999999999999999999999999999999999999999753221111 111111111111
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHH
Q 040826 299 GNINRADFESILKIAVLCVAKSSKGRPTID 328 (347)
Q Consensus 299 ~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ 328 (347)
.++...+++...++...|++||.+|....
T Consensus 408 -ey~~kFS~eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 408 -EYSDKFSEEAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred -hcccccCHHHHHHHHHHHccCHHHhccCC
Confidence 33445567889999999999999997554
No 329
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=3.2e-37 Score=266.69 Aligned_cols=245 Identities=29% Similarity=0.401 Sum_probs=199.5
Q ss_pred CcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC----hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN----TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
+|...+.||+|++|.||++... +++.+++|.+..... ...+.+|++.+++++|+|++++++++.+.+..++++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 3566788999999999999855 678999999876542 34688999999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccce
Q 040826 142 CAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKV 221 (347)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 221 (347)
+++++|.+++... ..+++..+..++.|++.|+.+|| +.|++|+||+|+||+++.++.++|+|||.+........ .
T Consensus 81 ~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-~ 155 (254)
T cd06627 81 AENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLH---EQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK-D 155 (254)
T ss_pred CCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcc-c
Confidence 9999999988654 56899999999999999999999 88999999999999999999999999999987643222 1
Q ss_pred eecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCC
Q 040826 222 FTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNI 301 (347)
Q Consensus 222 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 301 (347)
.....++..|+|||...+..++.++|+||+|+++++|++|..|+...... .... ... .... +. .
T Consensus 156 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~-~~~~---~~~-~~~~-------~~----~ 219 (254)
T cd06627 156 DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPM-AALF---RIV-QDDH-------PP----L 219 (254)
T ss_pred ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHH-HHHH---HHh-ccCC-------CC----C
Confidence 23346788999999998878889999999999999999999998643321 1111 111 1111 01 1
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 302 NRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 302 ~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
+......+.+++.+||+.+|++|||+.+++.
T Consensus 220 ~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 220 PEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred CCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 1122357899999999999999999999875
No 330
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4e-38 Score=296.93 Aligned_cols=266 Identities=20% Similarity=0.217 Sum_probs=189.0
Q ss_pred HhcCcccCCeeeecCCeeEEEEEeC--CCCEEEEE------------------EcccC-CChhHHHHHHHHhhcCCCCcc
Q 040826 64 AINNDWDRRFLGRGSAGLVYKGVLP--SGQVVAIK------------------HIYKS-NNTDSFSREVEGLSRVRHPNL 122 (347)
Q Consensus 64 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK------------------~~~~~-~~~~~~~~e~~~l~~l~h~ni 122 (347)
..++|...+.||+|+||.||+|... ++...+.| .+... .....+.+|+.++++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 4678999999999999999998743 22222222 11111 122357789999999999999
Q ss_pred eeeeeEEEeCCeEEEEEeecCCCChHHHhhcCC----CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEec
Q 040826 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKD----SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLT 198 (347)
Q Consensus 123 v~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~ 198 (347)
+++++++...+..+++++++.+ +|.+++.... .......+..++.|++.||.||| +++|+||||||+|||++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH---~~gIiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIH---DKKLIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEC
Confidence 9999999999999999999865 7877774321 22345677889999999999999 88999999999999999
Q ss_pred CCCceEEeecccceecCCCccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCCh--hhhhHHH
Q 040826 199 EKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDF--DARDQLT 276 (347)
Q Consensus 199 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~--~~~~~~~ 276 (347)
.++.+||+|||++...............|+..|+|||++.+..++.++|||||||++|+|++|..++.... ....++.
T Consensus 302 ~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~ 381 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLL 381 (501)
T ss_pred CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHH
Confidence 99999999999998765332222334568999999999999999999999999999999999986543221 1222222
Q ss_pred HHHhhhcCCCCCccc-------ccCC-CC---CCCCC-----HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 277 RKARDVSMGKRPIKD-------FEDP-RL---NGNIN-----RADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 277 ~~~~~~~~~~~~~~~-------~~~~-~l---~~~~~-----~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
............... +.+. .+ ...+. .....++.+++.+||+.||.+|||+.|++..
T Consensus 382 ~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 382 KIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred HHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 222221111000000 0000 00 00000 0112457778899999999999999999863
No 331
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.3e-37 Score=274.86 Aligned_cols=248 Identities=26% Similarity=0.318 Sum_probs=194.6
Q ss_pred cccCCeeeecCCeeEEEEEe----CCCCEEEEEEcccCC------ChhHHHHHHHHhhcC-CCCcceeeeeEEEeCCeEE
Q 040826 68 DWDRRFLGRGSAGLVYKGVL----PSGQVVAIKHIYKSN------NTDSFSREVEGLSRV-RHPNLVCLFGCCVEGGEQY 136 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~------~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 136 (347)
|...+.||.|+||.||++.. .+|..||+|.+.... ..+.+.+|+.+++++ +|+||+++++++..+...+
T Consensus 2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (290)
T cd05613 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH 81 (290)
T ss_pred ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence 56678899999999999985 368899999986532 234677899999999 5999999999999989999
Q ss_pred EEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCC
Q 040826 137 LVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM 216 (347)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 216 (347)
+|+||+++++|.+++... ..+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 157 (290)
T cd05613 82 LILDYINGGELFTHLSQR-ERFKEQEVQIYSGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHE 157 (290)
T ss_pred EEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEECCCCCEEEeeCccceeccc
Confidence 999999999999998654 45889999999999999999999 88999999999999999999999999999887543
Q ss_pred CccceeecccCCCCccccccccC--CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccC
Q 040826 217 EESKVFTDVRGTIGYMDPEYMTN--AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFED 294 (347)
Q Consensus 217 ~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (347)
..........++..|+|||.+.+ ..++.++||||||+++|+|++|..|+...... ...............+
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-~~~~~~~~~~~~~~~~------ 230 (290)
T cd05613 158 DEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK-NSQAEISRRILKSEPP------ 230 (290)
T ss_pred ccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc-ccHHHHHHHhhccCCC------
Confidence 32222334558889999999875 34678999999999999999999998642211 1112222222211111
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q 040826 295 PRLNGNINRADFESILKIAVLCVAKSSKGRP-----TIDVVYE 332 (347)
Q Consensus 295 ~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rp-----s~~ei~~ 332 (347)
.+......+.+++.+||+.+|++|| ++.++++
T Consensus 231 ------~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 231 ------YPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred ------CCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 1112335789999999999999997 6677655
No 332
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-38 Score=299.49 Aligned_cols=255 Identities=25% Similarity=0.386 Sum_probs=206.8
Q ss_pred ccCCeeeecCCeeEEEEEeC----C----CCEEEEEEcccCCC---hhHHHHHHHHhhcC-CCCcceeeeeEEEeCCeEE
Q 040826 69 WDRRFLGRGSAGLVYKGVLP----S----GQVVAIKHIYKSNN---TDSFSREVEGLSRV-RHPNLVCLFGCCVEGGEQY 136 (347)
Q Consensus 69 ~~~~~lg~G~~g~V~~~~~~----~----~~~vavK~~~~~~~---~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 136 (347)
...+.||+|+||.|++|... . ...||||.+..... ...+..|+++|+.+ +|+|++.++|+|...+..+
T Consensus 299 ~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~ 378 (609)
T KOG0200|consen 299 KLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLY 378 (609)
T ss_pred cccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceE
Confidence 33458999999999999832 1 35799999986544 46789999999999 5999999999999999999
Q ss_pred EEEeecCCCChHHHhhcCC---------------CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCC
Q 040826 137 LVYEFCAAGNLAQHLLRKD---------------SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKL 201 (347)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~ 201 (347)
+|.||+..|+|.++++... ..++....+.++.|||.|++||+ +.+++||||..+|||+.++.
T Consensus 379 ~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~---~~~~vHRDLAaRNVLi~~~~ 455 (609)
T KOG0200|consen 379 VIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLA---SVPCVHRDLAARNVLITKNK 455 (609)
T ss_pred EEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHh---hCCccchhhhhhhEEecCCC
Confidence 9999999999999997665 34899999999999999999999 88899999999999999999
Q ss_pred ceEEeecccceecCCCccceeeccc--CCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHH
Q 040826 202 EPKLSDFGLAKMLGMEESKVFTDVR--GTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKA 279 (347)
Q Consensus 202 ~~kl~dfg~~~~~~~~~~~~~~~~~--~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~ 279 (347)
.+||+|||+++.............. -+..|||||.+....|+.++||||||++|||++|...++..+......+.
T Consensus 456 ~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~--- 532 (609)
T KOG0200|consen 456 VIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELL--- 532 (609)
T ss_pred EEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHH---
Confidence 9999999999975444444323222 45679999999999999999999999999999996544443332122222
Q ss_pred hhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 040826 280 RDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWKN 340 (347)
Q Consensus 280 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~~ 340 (347)
+.+..|.+. ..+..+..+++++|..||+.+|++||++.++.+.++..+.+
T Consensus 533 ~~l~~G~r~-----------~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~~ 582 (609)
T KOG0200|consen 533 EFLKEGNRM-----------EQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQD 582 (609)
T ss_pred HHHhcCCCC-----------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHHH
Confidence 222333221 23335568999999999999999999999999999998765
No 333
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1e-37 Score=273.94 Aligned_cols=240 Identities=23% Similarity=0.285 Sum_probs=184.9
Q ss_pred eeeecCCeeEEEEEe-CCCCEEEEEEcccCCC-----hhHHHHHHHHh---hcCCCCcceeeeeEEEeCCeEEEEEeecC
Q 040826 73 FLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNN-----TDSFSREVEGL---SRVRHPNLVCLFGCCVEGGEQYLVYEFCA 143 (347)
Q Consensus 73 ~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-----~~~~~~e~~~l---~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 143 (347)
.||+|+||.||++.. .+|+.+|+|.+..... ...+.+|...+ ...+|||++.+++.+..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 389999999999995 4688999998865321 12234444333 33479999999999998899999999999
Q ss_pred CCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceee
Q 040826 144 AGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT 223 (347)
Q Consensus 144 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 223 (347)
+++|.+++... ..+++..+..++.|++.||.||| +.+++|+||||+||++++++.++++|||++...... ...
T Consensus 81 ~~~L~~~i~~~-~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~---~~~ 153 (279)
T cd05633 81 GGDLHYHLSQH-GVFSEKEMRFYATEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK---KPH 153 (279)
T ss_pred CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcCCCCCCHHHEEECCCCCEEEccCCcceecccc---Ccc
Confidence 99999888654 45899999999999999999999 889999999999999999999999999998754321 112
Q ss_pred cccCCCCcccccccc-CCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCC
Q 040826 224 DVRGTIGYMDPEYMT-NAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNIN 302 (347)
Q Consensus 224 ~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 302 (347)
...++..|+|||.+. +..++.++|+||+|+++|+|++|..||......... ......... .. ..+
T Consensus 154 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~--~~~~~~~~~--------~~----~~~ 219 (279)
T cd05633 154 ASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH--EIDRMTLTV--------NV----ELP 219 (279)
T ss_pred CcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH--HHHHHhhcC--------Cc----CCc
Confidence 345899999999886 456889999999999999999999999643221111 111111000 01 122
Q ss_pred HHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHH
Q 040826 303 RADFESILKIAVLCVAKSSKGRP-----TIDVVYEE 333 (347)
Q Consensus 303 ~~~~~~l~~l~~~cl~~~p~~Rp-----s~~ei~~~ 333 (347)
.....++.+++.+||+.||.+|| |+++++++
T Consensus 220 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 220 DSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred cccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 23346799999999999999999 58888774
No 334
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=2e-37 Score=269.92 Aligned_cols=248 Identities=23% Similarity=0.311 Sum_probs=195.4
Q ss_pred cCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC-------ChhHHHHHHHHhhcCCCCcceeeeeEEEeC--CeE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN-------NTDSFSREVEGLSRVRHPNLVCLFGCCVEG--GEQ 135 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~ 135 (347)
.+|...+.||+|+||.||+|.. .+|..+++|.+.... ....+.+|++++++++|+||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4677889999999999999995 468999999875321 123677899999999999999999998763 468
Q ss_pred EEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecC
Q 040826 136 YLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLG 215 (347)
Q Consensus 136 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 215 (347)
++++||+++++|.+++.... .+++.....++.|++.|+.||| +.+++|+||+|+||+++.++.++|+|||++....
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 157 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG-ALTENVTRRYTRQILQGVSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQ 157 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECccccccccc
Confidence 89999999999999886543 4789999999999999999999 8899999999999999999999999999988653
Q ss_pred CCc--cceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCccccc
Q 040826 216 MEE--SKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFE 293 (347)
Q Consensus 216 ~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (347)
... ........++..|+|||.+.+..++.++|+||||+++++|++|+.||...... ....+.......
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~~~------ 227 (264)
T cd06653 158 TICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM----AAIFKIATQPTK------ 227 (264)
T ss_pred cccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH----HHHHHHHcCCCC------
Confidence 211 11122345788999999999888899999999999999999999998743211 111221111111
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 294 DPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 294 ~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
+ .++....+.+.+++.+||+ +|..|||..+++.+
T Consensus 228 -~----~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 228 -P----MLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred -C----CCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 1 1222334679999999998 57999999988753
No 335
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=7.3e-38 Score=276.14 Aligned_cols=253 Identities=27% Similarity=0.329 Sum_probs=198.0
Q ss_pred cccCCeeeecCCeeEEEEEe----CCCCEEEEEEcccCC------ChhHHHHHHHHhhcC-CCCcceeeeeEEEeCCeEE
Q 040826 68 DWDRRFLGRGSAGLVYKGVL----PSGQVVAIKHIYKSN------NTDSFSREVEGLSRV-RHPNLVCLFGCCVEGGEQY 136 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~------~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 136 (347)
|...+.||+|++|.||++.. .+++.+++|.+.... ....+.+|+.++.++ +|||++++++.+..+...+
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~ 81 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH 81 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence 55667899999999999984 357889999886431 234577899999999 5999999999999999999
Q ss_pred EEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCC
Q 040826 137 LVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM 216 (347)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 216 (347)
+||||+++++|.+++... ..+++..+..++.|++++|.||| +.+++|+||+|+||+++.++.++++|||++.....
T Consensus 82 lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH---~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 157 (288)
T cd05583 82 LILDYVNGGELFTHLYQR-EHFTESEVRVYIAEIVLALDHLH---QLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLA 157 (288)
T ss_pred EEEecCCCCcHHHHHhhc-CCcCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEEECcccccccc
Confidence 999999999999988653 45889999999999999999999 78999999999999999999999999999876543
Q ss_pred CccceeecccCCCCccccccccCCc--cCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccC
Q 040826 217 EESKVFTDVRGTIGYMDPEYMTNAK--LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFED 294 (347)
Q Consensus 217 ~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (347)
..........++..|+|||.+.+.. .+.++|+||||+++|+|++|..||....... ......+.......+.
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~----- 231 (288)
T cd05583 158 EEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQN-SQSEISRRILKSKPPF----- 231 (288)
T ss_pred ccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccc-hHHHHHHHHHccCCCC-----
Confidence 3222223345788999999987654 7889999999999999999999986432111 1112222221111111
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 040826 295 PRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKA 337 (347)
Q Consensus 295 ~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~ 337 (347)
+......+.+++.+||+.+|++|||+.++.+.|+..
T Consensus 232 -------~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 232 -------PKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred -------CcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 112235688999999999999999999888777654
No 336
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=3.1e-37 Score=275.28 Aligned_cols=242 Identities=27% Similarity=0.355 Sum_probs=192.4
Q ss_pred cccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCCC-----hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 68 DWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNN-----TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
|...+.||+|+||.||+|.. .+|+.+++|.+..... ...+.+|++.++.++|||++++++++.+....+++|||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 44556799999999999995 4688999998864322 23577899999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccce
Q 040826 142 CAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKV 221 (347)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 221 (347)
+.+ ++.+++......+++..+..++.|++.|+.||| +.|++|+||+|+||+++.++.++|+|||++.... .
T Consensus 103 ~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~-----~ 173 (313)
T cd06633 103 CLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASKSS-----P 173 (313)
T ss_pred CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChhhEEECCCCCEEEeecCCCcccC-----C
Confidence 975 888888666667899999999999999999999 7899999999999999999999999999876432 1
Q ss_pred eecccCCCCcccccccc---CCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCC
Q 040826 222 FTDVRGTIGYMDPEYMT---NAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLN 298 (347)
Q Consensus 222 ~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 298 (347)
.....++..|+|||.+. +..++.++|+||||+++|+|++|..|+......... .... ....+ ..
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~-~~~~----~~~~~-------~~- 240 (313)
T cd06633 174 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL-YHIA----QNDSP-------TL- 240 (313)
T ss_pred CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHH----hcCCC-------CC-
Confidence 22346788999999874 456888999999999999999999998644222111 1111 11110 00
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 299 GNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 299 ~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
........+.+++.+||+.+|.+||++.+++..
T Consensus 241 --~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 241 --QSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred --CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 011122468999999999999999999999864
No 337
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=5.9e-38 Score=272.94 Aligned_cols=243 Identities=25% Similarity=0.355 Sum_probs=193.7
Q ss_pred eeecCCeeEEEEEeC-CCCEEEEEEcccCC-----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCCCCh
Q 040826 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSN-----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNL 147 (347)
Q Consensus 74 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 147 (347)
||.|+||.||++... +|+.+++|.+.... ....+.+|++.+++++|||++++++.+......++++||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999976 58999999986543 234688899999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcc-------c
Q 040826 148 AQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES-------K 220 (347)
Q Consensus 148 ~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~-------~ 220 (347)
.+++...+ .+++..+..++.|+++||+||| +.+++|+||+|+||++++++.++|+|||++........ .
T Consensus 81 ~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 156 (265)
T cd05579 81 ASLLENVG-SLDEDVARIYIAEIVLALEYLH---SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEK 156 (265)
T ss_pred HHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccc
Confidence 99886544 6899999999999999999999 88999999999999999999999999998876432211 1
Q ss_pred eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCC
Q 040826 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGN 300 (347)
Q Consensus 221 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 300 (347)
......++..|+|||...+...+.++|+||||++++++++|..||...... ... .....+...... .
T Consensus 157 ~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~-~~~----~~~~~~~~~~~~--------~ 223 (265)
T cd05579 157 EDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE-EIF----QNILNGKIEWPE--------D 223 (265)
T ss_pred cccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-HHH----HHHhcCCcCCCc--------c
Confidence 223345788999999998888899999999999999999999998744321 111 111111111110 0
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 040826 301 INRADFESILKIAVLCVAKSSKGRPTIDVVYEEID 335 (347)
Q Consensus 301 ~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~ 335 (347)
. .....+.+++.+||+.+|++|||+..+.+.|+
T Consensus 224 ~--~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 224 V--EVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred c--cCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 0 02367899999999999999999966655554
No 338
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=1.5e-37 Score=270.08 Aligned_cols=242 Identities=21% Similarity=0.249 Sum_probs=187.5
Q ss_pred CeeeecCCeeEEEEEe-CCCCEEEEEEcccCCC-----hhHHHHHHHH-hhcCCCCcceeeeeEEEeCCeEEEEEeecCC
Q 040826 72 RFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNN-----TDSFSREVEG-LSRVRHPNLVCLFGCCVEGGEQYLVYEFCAA 144 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-----~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 144 (347)
+.||+|+||.||+|.. .+|+.||+|.+..... ...+..|... ....+|+|++++++++..++..++++||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 4599999999999995 4689999999865321 1223444444 3455899999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeec
Q 040826 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD 224 (347)
Q Consensus 145 gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 224 (347)
++|.+++... ..+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++..... ...
T Consensus 82 ~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-----~~~ 152 (260)
T cd05611 82 GDCASLIKTL-GGLPEDWAKQYIAEVVLGVEDLH---QRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE-----NKK 152 (260)
T ss_pred CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEeecccceeccc-----ccc
Confidence 9999988654 45899999999999999999999 78999999999999999999999999998875432 223
Q ss_pred ccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHH
Q 040826 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRA 304 (347)
Q Consensus 225 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 304 (347)
..++..|+|||.+.+..++.++|+||||+++|+|++|..||...... .... ....+...... .....
T Consensus 153 ~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~----~~~~~~~~~~~--------~~~~~ 219 (260)
T cd05611 153 FVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPD-AVFD----NILSRRINWPE--------EVKEF 219 (260)
T ss_pred CCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHH-HHHH----HHHhcccCCCC--------ccccc
Confidence 45788999999998888899999999999999999999999754322 1111 11111111000 11112
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 040826 305 DFESILKIAVLCVAKSSKGRPTIDVVYEEID 335 (347)
Q Consensus 305 ~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~ 335 (347)
....+.+++.+||+.+|++|||+.++.+.|+
T Consensus 220 ~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~ 250 (260)
T cd05611 220 CSPEAVDLINRLLCMDPAKRLGANGYQEIKS 250 (260)
T ss_pred CCHHHHHHHHHHccCCHHHccCCCcHHHHHc
Confidence 3467999999999999999998776655544
No 339
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.4e-37 Score=275.05 Aligned_cols=251 Identities=19% Similarity=0.195 Sum_probs=182.7
Q ss_pred cCcccCCeeeecCCeeEEEEEeCC----CCEEEEEEcccCCCh---h----------HHHHHHHHhhcCCCCcceeeeeE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLPS----GQVVAIKHIYKSNNT---D----------SFSREVEGLSRVRHPNLVCLFGC 128 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~---~----------~~~~e~~~l~~l~h~niv~~~~~ 128 (347)
++|...+.||+|+||.||+|...+ +..+++|........ + ....+...+..+.|+|+++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 567788999999999999999644 345666654322211 0 11223344566789999999987
Q ss_pred EEeCC----eEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceE
Q 040826 129 CVEGG----EQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPK 204 (347)
Q Consensus 129 ~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~k 204 (347)
+.... ..++++++... ++.+.+... ...++..+..++.|++.||.||| +.+++||||||+|||++.++.++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~iiHrDiKp~Nill~~~~~~~ 166 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLVE-NTKEIFKRI-KCKNKKLIKNIMKDMLTTLEYIH---EHGISHGDIKPENIMVDGNNRGY 166 (294)
T ss_pred eeEecCCceEEEEEEehhcc-CHHHHHHhh-ccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCcEE
Confidence 66543 34677887654 666665432 33678889999999999999999 88999999999999999999999
Q ss_pred EeecccceecCCCcc------ceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHH--
Q 040826 205 LSDFGLAKMLGMEES------KVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLT-- 276 (347)
Q Consensus 205 l~dfg~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~-- 276 (347)
|+|||+++....... .......||+.|+|||...+..++.++||||||+++|+|++|+.||...........
T Consensus 167 l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~ 246 (294)
T PHA02882 167 IIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAA 246 (294)
T ss_pred EEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHh
Confidence 999999987532211 112234689999999999999999999999999999999999999975422211111
Q ss_pred --HHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 040826 277 --RKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEI 334 (347)
Q Consensus 277 --~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l 334 (347)
.....+..+.... ..+..++.+++..||+.+|++||++.++.+.+
T Consensus 247 ~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 247 KCDFIKRLHEGKIKI-------------KNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHHHHHHhhhhhhcc-------------CCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 1111111111110 11236799999999999999999999999876
No 340
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=2.3e-37 Score=275.50 Aligned_cols=243 Identities=28% Similarity=0.383 Sum_probs=192.1
Q ss_pred CcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC-----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEe
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN-----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYE 140 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 140 (347)
.|...+.||+|+||.||+|... +++.+++|.+.... ....+.+|+++++.++|+|++++.+++......++|+|
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 3555678999999999999954 67889999885421 12357789999999999999999999999999999999
Q ss_pred ecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccc
Q 040826 141 FCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220 (347)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 220 (347)
|+.+ +|.+.+......+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.++++|||++......
T Consensus 96 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~--- 168 (308)
T cd06634 96 YCLG-SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA--- 168 (308)
T ss_pred ccCC-CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHhEEECCCCcEEECCcccceeecCc---
Confidence 9974 888877655566899999999999999999999 889999999999999999999999999998765321
Q ss_pred eeecccCCCCcccccccc---CCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCC
Q 040826 221 VFTDVRGTIGYMDPEYMT---NAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRL 297 (347)
Q Consensus 221 ~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 297 (347)
....++..|+|||.+. ...++.++||||||+++|+|++|..|+...... ........ +.. +..
T Consensus 169 --~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~~~~~~~~----~~~-------~~~ 234 (308)
T cd06634 169 --NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-SALYHIAQ----NES-------PAL 234 (308)
T ss_pred --ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH-HHHHHHhh----cCC-------CCc
Confidence 2345788999999874 346788999999999999999999998643211 11111111 110 000
Q ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 298 NGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 298 ~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
........+.+++.+||+.+|.+||++.++++.
T Consensus 235 ---~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~ 267 (308)
T cd06634 235 ---QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 267 (308)
T ss_pred ---CcccccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence 011233578999999999999999999998765
No 341
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=9.3e-38 Score=281.60 Aligned_cols=262 Identities=26% Similarity=0.380 Sum_probs=195.4
Q ss_pred HhcCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccC----CChhHHHHHHHHhhcC-CCCcceeeeeEEEeC--CeE
Q 040826 64 AINNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKS----NNTDSFSREVEGLSRV-RHPNLVCLFGCCVEG--GEQ 135 (347)
Q Consensus 64 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~----~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~--~~~ 135 (347)
..++|...+.||+|+||.||+|... +|+.+++|++... .....+.+|+.+++++ +||||+++++++... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 3567777888999999999999965 6889999988542 2234577899999999 999999999987643 468
Q ss_pred EEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecC
Q 040826 136 YLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLG 215 (347)
Q Consensus 136 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 215 (347)
++||||+++ +|.+++... .+++..+..++.|++.||.||| +.|++|+||+|+||+++.++.++|+|||++....
T Consensus 85 ~lv~e~~~~-~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH---~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~ 158 (337)
T cd07852 85 YLVFEYMET-DLHAVIRAN--ILEDVHKRYIMYQLLKALKYIH---SGNVIHRDLKPSNILLNSDCRVKLADFGLARSLS 158 (337)
T ss_pred EEEeccccc-CHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccchhccc
Confidence 999999985 998888554 6889999999999999999999 8899999999999999999999999999988654
Q ss_pred CCcc----ceeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCC----
Q 040826 216 MEES----KVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGK---- 286 (347)
Q Consensus 216 ~~~~----~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~---- 286 (347)
.... .......++..|+|||.+.+ ..++.++|+||||+++|+|++|+.||...... +.............
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~ 237 (337)
T cd07852 159 ELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTL-NQLEKIIEVIGPPSAEDI 237 (337)
T ss_pred cccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCCHHHH
Confidence 3221 12233457889999998764 56788999999999999999999998643221 11111111100000
Q ss_pred ---------C---CcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 287 ---------R---PIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 287 ---------~---~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
. ........... ........++.+++.+||+.+|++|||+.++++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 238 ESIKSPFAATMLDSLPSRPRKPLD-ELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHhhhHHHhhhhcccccccchh-hhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0 00000000000 0111134679999999999999999999999974
No 342
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=7.9e-38 Score=281.97 Aligned_cols=265 Identities=21% Similarity=0.277 Sum_probs=197.7
Q ss_pred hcCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccC----CChhHHHHHHHHhhcCCCCcceeeeeEEEeC-----Ce
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKS----NNTDSFSREVEGLSRVRHPNLVCLFGCCVEG-----GE 134 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~ 134 (347)
.++|...+.||+|+||.||++.. .+|..|++|.+... .....+.+|+.+++.++|+||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 35678888999999999999995 47899999988643 2234567899999999999999999987643 35
Q ss_pred EEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceec
Q 040826 135 QYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKML 214 (347)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~ 214 (347)
.++++||+. ++|.+++... ..+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++...
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~ 158 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSS-QTLSDDHCQYFLYQLLRGLKYIH---SANVLHRDLKPSNLLLNANCDLKICDFGLARTT 158 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECcCcccccc
Confidence 799999997 5898888654 46899999999999999999999 889999999999999999999999999998865
Q ss_pred CCCccceeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCC-Cc---
Q 040826 215 GMEESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKR-PI--- 289 (347)
Q Consensus 215 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~--- 289 (347)
.... .......++..|+|||.+.+ ..++.++|+||||+++|+|++|+.||...... ............... ..
T Consensus 159 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 236 (337)
T cd07858 159 SEKG-DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYV-HQLKLITELLGSPSEEDLGFI 236 (337)
T ss_pred CCCc-ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChH-HHHHHHHHHhCCCChHHhhhc
Confidence 4221 22233457889999998864 56889999999999999999999998654221 111111111000000 00
Q ss_pred ------------ccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH--HHHH
Q 040826 290 ------------KDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE--IDKA 337 (347)
Q Consensus 290 ------------~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~--l~~~ 337 (347)
.....+... ........++.+++.+||+.+|.+|||++++++. ++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 237 RNEKARRYIRSLPYTPRQSFA-RLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred CchhhhHHHHhcCcccccCHH-HHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence 000000000 0111234678999999999999999999999976 5544
No 343
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.4e-38 Score=302.92 Aligned_cols=253 Identities=26% Similarity=0.391 Sum_probs=189.1
Q ss_pred HHHhcCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeC-----
Q 040826 62 ENAINNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEG----- 132 (347)
Q Consensus 62 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~----- 132 (347)
.+-.++|...+.||+||||.||+++.+ +|+.||||++.-... ...+.+|+..+.+|+|||+|+++..+.+.
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 445677888899999999999999965 899999999976532 23578899999999999999987643210
Q ss_pred --------------------------------------------------------------------------------
Q 040826 133 -------------------------------------------------------------------------------- 132 (347)
Q Consensus 133 -------------------------------------------------------------------------------- 132 (347)
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence
Q ss_pred ----------------------------------CeEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhh
Q 040826 133 ----------------------------------GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLH 178 (347)
Q Consensus 133 ----------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh 178 (347)
...|+-||||+.-+|.+++..+...-.....++++++|++||.|+|
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIH 714 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHH
Confidence 0126678888886666666443322246789999999999999999
Q ss_pred hccCCCceeCCCCCCCEEecCCCceEEeecccceecC-----------------CCccceeecccCCCCccccccccCC-
Q 040826 179 HYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLG-----------------MEESKVFTDVRGTIGYMDPEYMTNA- 240 (347)
Q Consensus 179 ~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~-----------------~~~~~~~~~~~~~~~y~aPE~~~~~- 240 (347)
+.|++||||||.||++++++.+||+|||++.... .......++..||.-|.|||++.+.
T Consensus 715 ---~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~ 791 (1351)
T KOG1035|consen 715 ---DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTS 791 (1351)
T ss_pred ---hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccc
Confidence 8899999999999999999999999999998721 0111234556799999999999865
Q ss_pred --ccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhcc
Q 040826 241 --KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVA 318 (347)
Q Consensus 241 --~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~ 318 (347)
.|+.|+|+||||++++||+. ||.-.+.... .....+.+.-|.. ..+..+..+.=.+++.|+++
T Consensus 792 ~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~----iL~~LR~g~iP~~--------~~f~~~~~~~e~slI~~Ll~ 856 (1351)
T KOG1035|consen 792 SNKYNSKIDMYSLGIVLFEMLY---PFGTSMERAS----ILTNLRKGSIPEP--------ADFFDPEHPEEASLIRWLLS 856 (1351)
T ss_pred cccccchhhhHHHHHHHHHHhc---cCCchHHHHH----HHHhcccCCCCCC--------cccccccchHHHHHHHHHhc
Confidence 49999999999999999985 3543333322 2233333322211 11222333567889999999
Q ss_pred CCCCCCCCHHHHHH
Q 040826 319 KSSKGRPTIDVVYE 332 (347)
Q Consensus 319 ~~p~~Rps~~ei~~ 332 (347)
+||++|||+.|++.
T Consensus 857 hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 857 HDPSKRPTATELLN 870 (1351)
T ss_pred CCCccCCCHHHHhh
Confidence 99999999999874
No 344
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=3.4e-37 Score=272.28 Aligned_cols=241 Identities=24% Similarity=0.344 Sum_probs=193.0
Q ss_pred CeeeecCCeeEEEEEe-CCCCEEEEEEcccCC--ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCCCChH
Q 040826 72 RFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN--NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLA 148 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 148 (347)
.+||+|+||.||++.. .+|+.+++|.+.... ....+.+|+..++.++|+|++++++.+...+..+++|||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 4699999999999986 478999999875433 2346888999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeecccCC
Q 040826 149 QHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGT 228 (347)
Q Consensus 149 ~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 228 (347)
+++.. ..+++.....++.|++.|++||| +.|++|+||+|+||++++++.++|+|||++...... ........++
T Consensus 106 ~~~~~--~~~~~~~~~~~~~ql~~~l~~lH---~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~~ 179 (292)
T cd06657 106 DIVTH--TRMNEEQIAAVCLAVLKALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-VPRRKSLVGT 179 (292)
T ss_pred HHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEcccccceecccc-cccccccccC
Confidence 97743 35789999999999999999999 789999999999999999999999999988765322 1222334578
Q ss_pred CCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHHH
Q 040826 229 IGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFES 308 (347)
Q Consensus 229 ~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 308 (347)
..|+|||.+.+..++.++|+||+|+++|+|++|..||...... .......... .. .+. ........
T Consensus 180 ~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~-~~~~~~~~~~----~~-------~~~--~~~~~~~~ 245 (292)
T cd06657 180 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL-KAMKMIRDNL----PP-------KLK--NLHKVSPS 245 (292)
T ss_pred ccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhhC----Cc-------ccC--CcccCCHH
Confidence 8999999998888899999999999999999999998743221 1111111111 00 000 00112346
Q ss_pred HHHHHHHhccCCCCCCCCHHHHHH
Q 040826 309 ILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 309 l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
+.+++.+||+.+|.+||++.++++
T Consensus 246 l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 246 LKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred HHHHHHHHHhCCcccCcCHHHHhc
Confidence 889999999999999999999987
No 345
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=7.1e-38 Score=281.96 Aligned_cols=262 Identities=21% Similarity=0.286 Sum_probs=195.3
Q ss_pred hcCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC----ChhHHHHHHHHhhcCCCCcceeeeeEEEe----CCeE
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLVCLFGCCVE----GGEQ 135 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~ 135 (347)
.++|...+.||+|++|.||+|.. .+|..|++|++.... ....+.+|+.++++++||||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 36788888999999999999995 468999999987542 23457789999999999999999987753 3468
Q ss_pred EEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecC
Q 040826 136 YLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLG 215 (347)
Q Consensus 136 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 215 (347)
++|+||+.+ +|.+++... ..+++..+..++.|++.||.||| +.+++|+||||+||++++++.++|+|||++....
T Consensus 84 ~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 158 (334)
T cd07855 84 YVVMDLMES-DLHHIIHSD-QPLTEEHIRYFLYQLLRGLKYIH---SANVIHRDLKPSNLLVNEDCELRIGDFGMARGLS 158 (334)
T ss_pred EEEEehhhh-hHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEecccccceeec
Confidence 999999964 898888544 44899999999999999999999 7899999999999999999999999999987653
Q ss_pred CCccc---eeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCC---
Q 040826 216 MEESK---VFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRP--- 288 (347)
Q Consensus 216 ~~~~~---~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--- 288 (347)
..... ......++..|+|||.+.+ ..++.++|+||||+++|+|++|+.||...... ..+.............
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~-~~~~~~~~~~g~~~~~~~~ 237 (334)
T cd07855 159 SSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYV-HQLKLILSVLGSPSEEVLN 237 (334)
T ss_pred ccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChH-HHHHHHHHHhCCChhHhhh
Confidence 22211 1123467889999998865 46889999999999999999999999643221 1111111110000000
Q ss_pred ------cccccC-CCCC-----CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 289 ------IKDFED-PRLN-----GNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 289 ------~~~~~~-~~l~-----~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
.....+ .... ....+...+++.+++.+||+.+|++|||+.+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 238 RIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred hhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 000000 0000 0011223568999999999999999999999876
No 346
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=9.7e-38 Score=280.70 Aligned_cols=265 Identities=24% Similarity=0.309 Sum_probs=201.3
Q ss_pred CcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCC-----eEE
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGG-----EQY 136 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~ 136 (347)
+|...+.||+|++|.||+|... +|..+++|.+.... ....+.+|+..++.++|+|++++.+++.... ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4667788999999999999964 58999999887643 3457889999999999999999999987764 789
Q ss_pred EEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCC
Q 040826 137 LVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM 216 (347)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 216 (347)
++|||+++ +|.+++.... .+++..++.++.|++.||.+|| +.|++|+||||+||+++.++.++|+|||.+.....
T Consensus 81 lv~e~~~~-~l~~~l~~~~-~l~~~~~~~i~~~l~~~l~~LH---~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~ 155 (330)
T cd07834 81 IVTELMET-DLHKVIKSPQ-PLTDDHIQYFLYQILRGLKYLH---SANVIHRDLKPSNILVNSNCDLKICDFGLARGVDP 155 (330)
T ss_pred EEecchhh-hHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccCceEeecc
Confidence 99999985 8988886544 7999999999999999999999 88999999999999999999999999999987653
Q ss_pred Ccc--ceeecccCCCCccccccccCC-ccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCC------
Q 040826 217 EES--KVFTDVRGTIGYMDPEYMTNA-KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKR------ 287 (347)
Q Consensus 217 ~~~--~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~------ 287 (347)
... .......++..|+|||.+.+. .++.++|+||||+++|+|++|..||...... +..............
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~ 234 (330)
T cd07834 156 DEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYI-DQLNLIVEVLGTPSEEDLKFI 234 (330)
T ss_pred cccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHH-HHHHHHHHhcCCCChhHhhhc
Confidence 321 123334578899999999887 8899999999999999999999999754322 111111111100000
Q ss_pred ---CcccccC---CCC---CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH--HHHH
Q 040826 288 ---PIKDFED---PRL---NGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE--IDKA 337 (347)
Q Consensus 288 ---~~~~~~~---~~l---~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~--l~~~ 337 (347)
....... ... ...........+.+++.+||+.+|.+|||+.+++.. ++..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 295 (330)
T cd07834 235 TSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQL 295 (330)
T ss_pred cccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhh
Confidence 0000000 000 000111234678999999999999999999999974 4443
No 347
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=5e-37 Score=270.44 Aligned_cols=257 Identities=25% Similarity=0.336 Sum_probs=193.9
Q ss_pred cccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC----hhHHHHHHHHhhcC---CCCcceeeeeEEEeCCe-----
Q 040826 68 DWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN----TDSFSREVEGLSRV---RHPNLVCLFGCCVEGGE----- 134 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~----- 134 (347)
|...+.||+|+||.||+|... ++..+++|.+..... ...+.+|+.+++++ +|+|++++++++.....
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 445678999999999999975 589999999874322 23466777776666 59999999999987766
Q ss_pred EEEEEeecCCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeeccccee
Q 040826 135 QYLVYEFCAAGNLAQHLLRKD-SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKM 213 (347)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~ 213 (347)
.+++|||+.+ +|.+++.... ..+++..++.++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||.+..
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH---~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~ 156 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLH---SHRIVHRDLKPQNILVTSDGQVKIADFGLARI 156 (287)
T ss_pred eEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhEEEccCCCEEEeccCccee
Confidence 8999999986 8988886533 36899999999999999999999 78999999999999999999999999999887
Q ss_pred cCCCccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCC---C--
Q 040826 214 LGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKR---P-- 288 (347)
Q Consensus 214 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~-- 288 (347)
..... ......++..|+|||.+.+..++.++|+||||+++|+|++|.+||..... .+....+......... +
T Consensus 157 ~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07838 157 YSFEM--ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSE-ADQLDKIFDVIGLPSEEEWPRN 233 (287)
T ss_pred ccCCc--ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCCh-HHHHHHHHHHcCCCChHhcCCC
Confidence 64221 12233478899999999988899999999999999999999988874332 2222222221111000 0
Q ss_pred -------cccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 289 -------IKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 289 -------~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
......... .....+....+.+++.+||+.||.+||++.+++.
T Consensus 234 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 234 VSLPRSSFPSYTPRSF-KSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred cccchhhcccccccch-hhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 000000000 1111234467889999999999999999999875
No 348
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=4.5e-37 Score=276.05 Aligned_cols=257 Identities=21% Similarity=0.277 Sum_probs=190.0
Q ss_pred eeeec--CCeeEEEEEe-CCCCEEEEEEcccCCC----hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCCC
Q 040826 73 FLGRG--SAGLVYKGVL-PSGQVVAIKHIYKSNN----TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAG 145 (347)
Q Consensus 73 ~lg~G--~~g~V~~~~~-~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 145 (347)
.||+| +||+||++.. .+|+.||+|.+..... .+.+.+|+.+++.++||||+++++++..++..++++||+.++
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~ 84 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG 84 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence 36666 9999999995 4799999999865432 246778999999999999999999999999999999999999
Q ss_pred ChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccce---
Q 040826 146 NLAQHLLRK-DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKV--- 221 (347)
Q Consensus 146 sL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~--- 221 (347)
+|.+++.+. ...+++..+..++.|++.||+||| +.+++||||||+||+++.++.++++||+............
T Consensus 85 ~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (328)
T cd08226 85 SANSLLKTYFPEGMSEALIGNILFGALRGLNYLH---QNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVV 161 (328)
T ss_pred CHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccc
Confidence 999988654 345889999999999999999999 8899999999999999999999999997544321111100
Q ss_pred ---eecccCCCCccccccccCC--ccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCC-----------
Q 040826 222 ---FTDVRGTIGYMDPEYMTNA--KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMG----------- 285 (347)
Q Consensus 222 ---~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~----------- 285 (347)
.....++..|+|||++.+. .++.++|+||||+++|+|++|..||....................
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (328)
T cd08226 162 YDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEES 241 (328)
T ss_pred ccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhh
Confidence 0112245679999998763 478899999999999999999999875432211111100000000
Q ss_pred -----C--------------CCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 286 -----K--------------RPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 286 -----~--------------~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
. ..........+...........+.+|+.+||+.||++|||+.++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 242 RMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred hhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 0 0000111112222233455678999999999999999999999974
No 349
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-38 Score=263.03 Aligned_cols=252 Identities=25% Similarity=0.334 Sum_probs=200.9
Q ss_pred HhcCcccC-CeeeecCCeeEEEEEeC-CCCEEEEEEcccCCChhHHHHHHHHhhcC-CCCcceeeeeEEEe----CCeEE
Q 040826 64 AINNDWDR-RFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFSREVEGLSRV-RHPNLVCLFGCCVE----GGEQY 136 (347)
Q Consensus 64 ~~~~~~~~-~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~----~~~~~ 136 (347)
++++|... ++||-|-.|.|-.|..+ +|+.+|+|++. +.....+|++..-.. .|||||.++++|.+ ...+.
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~---Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLL 135 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLL---DSPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLL 135 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHh---cCHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeE
Confidence 46667643 67999999999999954 79999999884 334456788765444 59999999999875 34678
Q ss_pred EEEeecCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecC---CCceEEeecccce
Q 040826 137 LVYEFCAAGNLAQHLLRK-DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTE---KLEPKLSDFGLAK 212 (347)
Q Consensus 137 lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~---~~~~kl~dfg~~~ 212 (347)
+|||.++||.|...+.+. ...+++.++..|++||+.|+.||| +.+|.||||||+|+|.+. |..+||+|||.++
T Consensus 136 iVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH---~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK 212 (400)
T KOG0604|consen 136 IVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLH---SMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAK 212 (400)
T ss_pred eeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHH---hcchhhccCChhheeeecCCCCcceEeccccccc
Confidence 999999999999999764 457999999999999999999999 889999999999999974 5579999999999
Q ss_pred ecCCCccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccc
Q 040826 213 MLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDF 292 (347)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (347)
... ........+-|+.|.|||++....|+...|+||+|+++|-|+.|.+||+..... .-.....+.+..+. .+|
T Consensus 213 ~t~--~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~-aispgMk~rI~~gq---y~F 286 (400)
T KOG0604|consen 213 ETQ--EPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-AISPGMKRRIRTGQ---YEF 286 (400)
T ss_pred ccC--CCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCc-cCChhHHhHhhccC---ccC
Confidence 753 234455667899999999999999999999999999999999999999864331 11122233344333 234
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 293 EDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 293 ~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
.+|++. ..++...+++...|..+|++|.|+.++.+
T Consensus 287 P~pEWs-----~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 287 PEPEWS-----CVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred CChhHh-----HHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 444442 34567888999999999999999999875
No 350
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=2.1e-37 Score=276.13 Aligned_cols=263 Identities=26% Similarity=0.304 Sum_probs=194.4
Q ss_pred hcCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC----hhHHHHHHHHhhcCCCCcceeeeeEEEeC-------
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN----TDSFSREVEGLSRVRHPNLVCLFGCCVEG------- 132 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~h~niv~~~~~~~~~------- 132 (347)
.++|...+.||+|+||.||+|... +++.+++|.+..... ...+.+|++.+++++||||+++++++...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 467888899999999999999954 688999998864322 23567899999999999999999887543
Q ss_pred -CeEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccc
Q 040826 133 -GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLA 211 (347)
Q Consensus 133 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~ 211 (347)
...++++||+.+ +|.+.+......+++..+..++.|+++||.||| +.+++|+||+|+||++++++.++|+|||++
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 162 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLH---ENHILHRDIKAANILIDNQGILKIADFGLA 162 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECcCccc
Confidence 346999999976 787777665667999999999999999999999 889999999999999999999999999998
Q ss_pred eecCCCccc----------eeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHh
Q 040826 212 KMLGMEESK----------VFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280 (347)
Q Consensus 212 ~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~ 280 (347)
......... ......++..|+|||.+.+ ..++.++||||||+++|+|++|+.||...... ........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~-~~~~~~~~ 241 (311)
T cd07866 163 RPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDI-DQLHLIFK 241 (311)
T ss_pred hhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHH
Confidence 765322111 1122346788999998765 45888999999999999999999998754332 22222211
Q ss_pred hhcCCCC-------Cccccc----CCCCCCC---CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 281 DVSMGKR-------PIKDFE----DPRLNGN---INRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 281 ~~~~~~~-------~~~~~~----~~~l~~~---~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
....... ...... ....... ........+.+++.+||+.||.+|||+.+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 242 LCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 1110000 000000 0000000 00112257889999999999999999999875
No 351
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=1.3e-37 Score=273.15 Aligned_cols=246 Identities=24% Similarity=0.328 Sum_probs=199.0
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC-----ChhHHHHHHHHhhcCC-CCcceeeeeEEEeCCeEEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN-----NTDSFSREVEGLSRVR-HPNLVCLFGCCVEGGEQYLV 138 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv 138 (347)
++|...+.||+|++|.||++... +|+.+++|.+.... ....+.+|..++++++ ||||+++++++..++..+++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 35777889999999999999954 78999999886532 2346788999999998 99999999999999999999
Q ss_pred EeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCc
Q 040826 139 YEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE 218 (347)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 218 (347)
||++++++|.+++...+ .+++..++.++.|++.||.+|| +.+++|+||+|+||+++.++.++++|||++.......
T Consensus 81 ~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~ql~~~l~~Lh---~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~ 156 (280)
T cd05581 81 LEYAPNGELLQYIRKYG-SLDEKCTRFYAAEILLALEYLH---SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNS 156 (280)
T ss_pred EcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEecCCccccccCCcc
Confidence 99999999999986543 6999999999999999999999 8899999999999999999999999999988654322
Q ss_pred c-------------------ceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHH
Q 040826 219 S-------------------KVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKA 279 (347)
Q Consensus 219 ~-------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~ 279 (347)
. .......++..|+|||...+..++.++|+||||++++++++|..|+...... .....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~-- 233 (280)
T cd05581 157 SPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEY-LTFQK-- 233 (280)
T ss_pred ccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHH-HHHHH--
Confidence 1 1222345788999999998888999999999999999999999998754321 11111
Q ss_pred hhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCH----HHHHH
Q 040826 280 RDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTI----DVVYE 332 (347)
Q Consensus 280 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~----~ei~~ 332 (347)
...... ..+....+.+.+++.+||+.+|.+|||+ .++++
T Consensus 234 --~~~~~~------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 234 --ILKLEY------------SFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred --HHhcCC------------CCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 111111 1111224579999999999999999999 77654
No 352
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=2.8e-37 Score=271.64 Aligned_cols=257 Identities=25% Similarity=0.317 Sum_probs=193.7
Q ss_pred cccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC---hhHHHHHHHHhhcCC-CCcceeeeeEEEeCCeEEEEEeec
Q 040826 68 DWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN---TDSFSREVEGLSRVR-HPNLVCLFGCCVEGGEQYLVYEFC 142 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~ 142 (347)
|...+.||+|++|.||+|... +++.+++|.+..... .....+|+..+++++ |+|++++++++.+++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 345678999999999999965 578999998865432 234557899999999 999999999999999999999999
Q ss_pred CCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccce
Q 040826 143 AAGNLAQHLLRKD-SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKV 221 (347)
Q Consensus 143 ~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 221 (347)
+|+|.+++.... ..+++..+..++.|++.+|.||| +.+++|+||+|+||++++++.++|+|||.+...... ..
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~--~~ 154 (283)
T cd07830 81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIH---KHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR--PP 154 (283)
T ss_pred -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCCEEEeecccceeccCC--CC
Confidence 679999886543 56899999999999999999999 789999999999999999999999999998865422 12
Q ss_pred eecccCCCCcccccccc-CCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCC---------------
Q 040826 222 FTDVRGTIGYMDPEYMT-NAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMG--------------- 285 (347)
Q Consensus 222 ~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~--------------- 285 (347)
.....++..|+|||.+. +..++.++|+||||+++++|++|+.||....... ............
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd07830 155 YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEID-QLYKICSVLGTPTKQDWPEGYKLASKL 233 (283)
T ss_pred cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHH-HHHHHHHhcCCCChhhhhhHhhhhccc
Confidence 23345788999999875 4567899999999999999999999886543221 111111100000
Q ss_pred CCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 286 KRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 286 ~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
...........+. .........+.+++.+||+.+|.+|||+.|++.
T Consensus 234 ~~~~~~~~~~~~~-~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 234 GFRFPQFAPTSLH-QLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred cccccccccccHH-HHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 0000000000000 000111367999999999999999999999875
No 353
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=3.4e-37 Score=267.76 Aligned_cols=245 Identities=23% Similarity=0.312 Sum_probs=191.0
Q ss_pred CcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccC-------CChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEE
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKS-------NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLV 138 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 138 (347)
+|...+.||+|+||.||++... .+..+++|.+... .....+..|+.++++++|||++++++++.+....+++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 3666788999999999999854 3444555544321 1223566789999999999999999999988899999
Q ss_pred EeecCCCChHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecC
Q 040826 139 YEFCAAGNLAQHLLR---KDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLG 215 (347)
Q Consensus 139 ~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 215 (347)
+||+++++|.+++.. ....+++..++.++.|++.|+.||| +.+++|+||+|+||++++ +.++++|||.+....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMH---QRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHH---HcCccccCCChhheEeec-CCEeecccCceeecC
Confidence 999999999988853 3456899999999999999999999 889999999999999975 569999999987653
Q ss_pred CCccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCC
Q 040826 216 MEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDP 295 (347)
Q Consensus 216 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (347)
... .......++..|+|||.+.+..++.++|+||||+++|+|++|..||...... ........+..+
T Consensus 157 ~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~------- 223 (260)
T cd08222 157 GSC-DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFL-----SVVLRIVEGPTP------- 223 (260)
T ss_pred CCc-ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH-----HHHHHHHcCCCC-------
Confidence 221 2223345788999999998888899999999999999999999998643211 111111111111
Q ss_pred CCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 296 RLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 296 ~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
..+.....++.+++.+||+.+|++||++.++++
T Consensus 224 ----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 224 ----SLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred ----CCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 112234467999999999999999999999986
No 354
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=7.3e-37 Score=275.57 Aligned_cols=260 Identities=25% Similarity=0.296 Sum_probs=194.7
Q ss_pred cCccc-CCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCCh----------------hHHHHHHHHhhcCCCCcceeeee
Q 040826 66 NNDWD-RRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNT----------------DSFSREVEGLSRVRHPNLVCLFG 127 (347)
Q Consensus 66 ~~~~~-~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~----------------~~~~~e~~~l~~l~h~niv~~~~ 127 (347)
++|.. .+.||.|+||.||+|... +|+.||+|.+...... ..+.+|++++++++|+||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 44543 466999999999999954 6899999988653221 14678999999999999999999
Q ss_pred EEEeCCeEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEee
Q 040826 128 CCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSD 207 (347)
Q Consensus 128 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~d 207 (347)
++...+..+++|||+.+ +|.+++... ..+++.....++.|++.||.||| +.+++|+||+|+||+++.++.++|+|
T Consensus 88 ~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH---~~~i~H~dl~~~nill~~~~~~kl~d 162 (335)
T PTZ00024 88 VYVEGDFINLVMDIMAS-DLKKVVDRK-IRLTESQVKCILLQILNGLNVLH---KWYFMHRDLSPANIFINSKGICKIAD 162 (335)
T ss_pred EEecCCcEEEEEecccc-CHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHeEECCCCCEEECC
Confidence 99999999999999975 899888543 45899999999999999999999 88999999999999999999999999
Q ss_pred cccceecCCCc-------------cceeecccCCCCccccccccCC-ccCCcccHHHHHHHHHHHHhCCCCcCCChhhhh
Q 040826 208 FGLAKMLGMEE-------------SKVFTDVRGTIGYMDPEYMTNA-KLTCASDIYSFGIVALQLLSGQKVIELDFDARD 273 (347)
Q Consensus 208 fg~~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~ 273 (347)
||++....... ........++..|+|||.+.+. .++.++|+||||+++|+|++|..||...... +
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~-~ 241 (335)
T PTZ00024 163 FGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEI-D 241 (335)
T ss_pred ccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-H
Confidence 99988654110 1111223467889999998764 4688999999999999999999998754332 2
Q ss_pred HHHHHHhhhcCCCCC-cc------------cccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 274 QLTRKARDVSMGKRP-IK------------DFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 274 ~~~~~~~~~~~~~~~-~~------------~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
.+............. .. ....+... ........++.+++.+||+.+|.+|||+.+++.
T Consensus 242 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 242 QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLK-TIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred HHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHH-HhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 222222211111000 00 00000000 011123467899999999999999999999986
No 355
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=1.2e-36 Score=271.74 Aligned_cols=255 Identities=21% Similarity=0.270 Sum_probs=187.8
Q ss_pred eeecCCeeEEEEEeCCCCEEEEEEcccC----CChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCCCChHH
Q 040826 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKS----NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQ 149 (347)
Q Consensus 74 lg~G~~g~V~~~~~~~~~~vavK~~~~~----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~ 149 (347)
+|.|+++.|+++.. +|+.||+|++... .....+.+|+..++.++|+||+++++++.+.+..+++|||+++++|.+
T Consensus 10 ~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 88 (314)
T cd08216 10 FEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCED 88 (314)
T ss_pred hcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHH
Confidence 44444444455444 7899999998654 223478899999999999999999999999999999999999999999
Q ss_pred HhhcC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccc------ee
Q 040826 150 HLLRK-DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK------VF 222 (347)
Q Consensus 150 ~l~~~-~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~------~~ 222 (347)
++... ...+++.....++.|+++||.||| +.+++|+||+|+||+++.++.++++|||.+......... ..
T Consensus 89 ~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH---~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~ 165 (314)
T cd08216 89 LLKTHFPEGLPELAIAFILKDVLNALDYIH---SKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFP 165 (314)
T ss_pred HHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCcceEEEecCCceEEecCccceeecccccccccccccc
Confidence 98653 456889999999999999999999 889999999999999999999999999988755321111 11
Q ss_pred ecccCCCCccccccccC--CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCC----------CCCcc
Q 040826 223 TDVRGTIGYMDPEYMTN--AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMG----------KRPIK 290 (347)
Q Consensus 223 ~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 290 (347)
....++..|+|||.+.+ ..++.++|+||||+++|+|++|..||............. ...... .....
T Consensus 166 ~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 244 (314)
T cd08216 166 KSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKV-RGTVPCLLDKSTYPLYEDSMS 244 (314)
T ss_pred ccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-hccCccccccCchhhhcCCcC
Confidence 22346778999999875 358889999999999999999999997543222111111 100000 00000
Q ss_pred ----cccCCC----CCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 291 ----DFEDPR----LNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 291 ----~~~~~~----l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
...++. ...........++.+++.+||+.||++|||+.++++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 245 QSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred cccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 000000 0111223445688999999999999999999999873
No 356
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-37 Score=239.76 Aligned_cols=260 Identities=22% Similarity=0.294 Sum_probs=209.1
Q ss_pred cccCCeeeecCCeeEEEEE-eCCCCEEEEEEcccCCC----hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeec
Q 040826 68 DWDRRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNN----TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFC 142 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 142 (347)
|...++||+|.||+||+++ ..+++.||+|+++-+.+ .....+|+.+++.++|.||++++++...+...-+|+|||
T Consensus 4 ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~c 83 (292)
T KOG0662|consen 4 YDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC 83 (292)
T ss_pred hHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHh
Confidence 3445679999999999999 56789999999875433 357889999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcccee
Q 040826 143 AAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVF 222 (347)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 222 (347)
+. .|..+...-++.+.......++.|+++|+.++| ++++.|||+||.|.+|+.+|++|++|||+++..+. +....
T Consensus 84 dq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fch---shnvlhrdlkpqnllin~ngelkladfglarafgi-pvrcy 158 (292)
T KOG0662|consen 84 DQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCH---SHNVLHRDLKPQNLLINRNGELKLADFGLARAFGI-PVRCY 158 (292)
T ss_pred hH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhh---hhhhhhccCCcceEEeccCCcEEecccchhhhcCC-ceEee
Confidence 88 999998777778999999999999999999999 88999999999999999999999999999997753 34455
Q ss_pred ecccCCCCccccccccCC-ccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCC----CcccccCCCC
Q 040826 223 TDVRGTIGYMDPEYMTNA-KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKR----PIKDFEDPRL 297 (347)
Q Consensus 223 ~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l 297 (347)
+..+.|..|.+|.++.+. -|+...|+||.||++.|+.....|..++.+..+++..+.+....... .+..+.|-..
T Consensus 159 saevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~ 238 (292)
T KOG0662|consen 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKP 238 (292)
T ss_pred eceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcc
Confidence 666789999999999875 48889999999999999998777777777777888777765533211 0111111111
Q ss_pred CC---------CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 298 NG---------NINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 298 ~~---------~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
.. .+-+.....=.+|++..+..+|.+|.++++.++
T Consensus 239 yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 239 YPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred cCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 11 111222234567788888999999999998765
No 357
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=1.2e-36 Score=266.88 Aligned_cols=239 Identities=23% Similarity=0.279 Sum_probs=184.8
Q ss_pred eeeecCCeeEEEEEe-CCCCEEEEEEcccCCC-----hhHHHHHH---HHhhcCCCCcceeeeeEEEeCCeEEEEEeecC
Q 040826 73 FLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNN-----TDSFSREV---EGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCA 143 (347)
Q Consensus 73 ~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~-----~~~~~~e~---~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 143 (347)
.||+|+||.||++.. .+++.||+|.+..... ...+..|. ..++...|||++.+.+.+...+..++|+||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 389999999999985 4688999998865321 11233343 33445579999999999999999999999999
Q ss_pred CCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceee
Q 040826 144 AGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT 223 (347)
Q Consensus 144 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 223 (347)
+++|.+++... ..+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.++|+|||++...... ...
T Consensus 81 g~~L~~~l~~~-~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~---~~~ 153 (278)
T cd05606 81 GGDLHYHLSQH-GVFSEAEMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK---KPH 153 (278)
T ss_pred CCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc---CCc
Confidence 99999888643 46899999999999999999999 789999999999999999999999999998754321 122
Q ss_pred cccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCC
Q 040826 224 DVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNIN 302 (347)
Q Consensus 224 ~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 302 (347)
...|+..|+|||.+.+ ..++.++|+||+|+++|+|++|+.||......... .......... +.+..
T Consensus 154 ~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~--~~~~~~~~~~--------~~~~~--- 220 (278)
T cd05606 154 ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH--EIDRMTLTMA--------VELPD--- 220 (278)
T ss_pred CcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchH--HHHHHhhccC--------CCCCC---
Confidence 3468999999999875 46889999999999999999999999754221111 1111111111 11111
Q ss_pred HHHHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q 040826 303 RADFESILKIAVLCVAKSSKGRP-----TIDVVYE 332 (347)
Q Consensus 303 ~~~~~~l~~l~~~cl~~~p~~Rp-----s~~ei~~ 332 (347)
....++.+++.+||..+|.+|| ++.++++
T Consensus 221 -~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 221 -SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred -cCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 1235799999999999999999 9999985
No 358
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=1.1e-36 Score=275.01 Aligned_cols=260 Identities=22% Similarity=0.302 Sum_probs=193.1
Q ss_pred hcCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC----ChhHHHHHHHHhhcCCCCcceeeeeEEEeC------C
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLVCLFGCCVEG------G 133 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~ 133 (347)
.++|...+.||+|+||.||+|.. .+|+.||+|.+.... ....+.+|+.+++.++||||+++++++... .
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 36788889999999999999995 478999999886532 224577899999999999999999988654 3
Q ss_pred eEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeeccccee
Q 040826 134 EQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKM 213 (347)
Q Consensus 134 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~ 213 (347)
..++++||+.. +|..+. +..+++..+..++.|++.||+||| +.+++||||+|+||+++.++.++|+|||++..
T Consensus 94 ~~~lv~e~~~~-~l~~~~---~~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~ 166 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIM---GHPLSEDKVQYLVYQMLCGLKYIH---SAGIIHRDLKPGNLAVNEDCELKILDFGLARH 166 (342)
T ss_pred eEEEEeccccc-CHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCCCCcC
Confidence 56999999975 777655 235889999999999999999999 78999999999999999999999999999875
Q ss_pred cCCCccceeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCC----
Q 040826 214 LGMEESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRP---- 288 (347)
Q Consensus 214 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---- 288 (347)
... ......++..|+|||.+.+ ..++.++|+||||+++|+|++|+.||...... ..+.............
T Consensus 167 ~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~ 241 (342)
T cd07879 167 ADA----EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVTGVPGPEFVQK 241 (342)
T ss_pred CCC----CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCHHHHHH
Confidence 422 1223456788999999876 46888999999999999999999999754321 1111111110000000
Q ss_pred ------------cccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH--HHHH
Q 040826 289 ------------IKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE--IDKA 337 (347)
Q Consensus 289 ------------~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~--l~~~ 337 (347)
........+. .........+.+++.+||+.||.+|||+.+++.. ++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~ 303 (342)
T cd07879 242 LEDKAAKSYIKSLPKYPRKDFS-TLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSF 303 (342)
T ss_pred hcccchHHHHhhcCCcccchHH-HHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhc
Confidence 0000000000 0001123568899999999999999999999854 5443
No 359
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=4.8e-37 Score=277.61 Aligned_cols=265 Identities=23% Similarity=0.275 Sum_probs=197.5
Q ss_pred cHHHHHHHhcCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC----ChhHHHHHHHHhhcCCCCcceeeeeEEEe
Q 040826 57 SKDEIENAINNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLVCLFGCCVE 131 (347)
Q Consensus 57 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 131 (347)
...++..+.++|...+.||+|+||.||++.. .+|+.||+|++.... ....+.+|+.++++++||||+++++++..
T Consensus 8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~ 87 (345)
T cd07877 8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 87 (345)
T ss_pred HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence 3455666789999999999999999999984 578999999986532 23457789999999999999999998764
Q ss_pred C------CeEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEE
Q 040826 132 G------GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205 (347)
Q Consensus 132 ~------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl 205 (347)
. ...+++++++ +++|.+++.. ..+++..+..++.|+++|+.||| +.+++|+||+|+||++++++.++|
T Consensus 88 ~~~~~~~~~~~lv~~~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl 161 (345)
T cd07877 88 ARSLEEFNDVYLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 161 (345)
T ss_pred cccccccccEEEEehhc-ccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEcCCCCEEE
Confidence 3 3467888876 6699887743 35899999999999999999999 889999999999999999999999
Q ss_pred eecccceecCCCccceeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcC
Q 040826 206 SDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSM 284 (347)
Q Consensus 206 ~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~ 284 (347)
+|||++..... ......++..|+|||.+.+ ..++.++||||||+++|+|++|+.||...... .......+....
T Consensus 162 ~dfg~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~ 236 (345)
T cd07877 162 LDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGT 236 (345)
T ss_pred ecccccccccc----cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCC
Confidence 99999876431 2233457889999998876 56888999999999999999999998643221 111111111100
Q ss_pred CCCCc----------------ccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 285 GKRPI----------------KDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 285 ~~~~~----------------~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
..... ......... ........++.+++.+|++.||.+|||+.+++..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 237 PGAELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred CCHHHHhhcccHhHHHHHHHhcccCCcchh-hhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 00000 000000000 0000123568999999999999999999998864
No 360
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-39 Score=262.70 Aligned_cols=260 Identities=27% Similarity=0.364 Sum_probs=203.3
Q ss_pred CcccccHHHHHHHhcCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCCC---hhHHHHHHHHh-hcCCCCcceeee
Q 040826 52 GLYRFSKDEIENAINNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNN---TDSFSREVEGL-SRVRHPNLVCLF 126 (347)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~e~~~l-~~l~h~niv~~~ 126 (347)
....|+.++++.. ..||.|+||+|++-.. ++|+..|||+++.... ...+..|.+.. +.-+.||||+++
T Consensus 57 ~~~~F~~~~Lqdl-------g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfy 129 (361)
T KOG1006|consen 57 HLHTFTSDNLQDL-------GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFY 129 (361)
T ss_pred cccccccchHHHH-------HHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHh
Confidence 4455666655544 5699999999999984 5899999999987544 44677787754 455799999999
Q ss_pred eEEEeCCeEEEEEeecCCCChHHHhhc----CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCc
Q 040826 127 GCCVEGGEQYLVYEFCAAGNLAQHLLR----KDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLE 202 (347)
Q Consensus 127 ~~~~~~~~~~lv~e~~~~gsL~~~l~~----~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~ 202 (347)
|.+..++..++.||.|+- ||..+... ....+++..+-+|..-+..||.||.. ...++|||+||+|||++..|.
T Consensus 130 Ga~F~EGdcWiCMELMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHRDvKPSNILldr~G~ 206 (361)
T KOG1006|consen 130 GALFSEGDCWICMELMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKE--ELKIIHRDVKPSNILLDRHGD 206 (361)
T ss_pred hhhhcCCceeeeHHHHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHH--HhhhhhccCChhheEEecCCC
Confidence 999999999999999976 77766532 34568999999999999999999986 568999999999999999999
Q ss_pred eEEeecccceecCCCccceeecccCCCCccccccccC--CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHh
Q 040826 203 PKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN--AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR 280 (347)
Q Consensus 203 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~ 280 (347)
+||||||.+..+. ++...+.-.|...|||||.+.. ..|+.+|||||||++|+|+.||+.|+......-+++..+.
T Consensus 207 vKLCDFGIcGqLv--~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv- 283 (361)
T KOG1006|consen 207 VKLCDFGICGQLV--DSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVV- 283 (361)
T ss_pred EeeecccchHhHH--HHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHH-
Confidence 9999999998763 3333445568899999998863 4589999999999999999999999876554444444443
Q ss_pred hhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 281 DVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 281 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
.+.++....-. -..+....+.+++..|+.+|...||.+.++.++
T Consensus 284 ---~gdpp~l~~~~------~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 284 ---IGDPPILLFDK------ECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred ---cCCCCeecCcc------cccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 33333221111 112344679999999999999999999988753
No 361
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=1.3e-36 Score=267.04 Aligned_cols=258 Identities=26% Similarity=0.358 Sum_probs=196.8
Q ss_pred cccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeec
Q 040826 68 DWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFC 142 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 142 (347)
|...+.||+|++|.||+|... +++.+++|.+.... ....+..|+..+++++|+|++++++++.+.+..++++||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 344577999999999999965 58999999987643 2346778999999999999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcccee
Q 040826 143 AAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVF 222 (347)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 222 (347)
++ +|.+++.+....+++..+..++.|++.||.+|| +.+++|+||+|+||++++++.++|+|||.+........ ..
T Consensus 81 ~~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~-~~ 155 (282)
T cd07829 81 DM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCH---SHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR-TY 155 (282)
T ss_pred Cc-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc-cc
Confidence 85 999999766456999999999999999999999 78999999999999999999999999999886542221 22
Q ss_pred ecccCCCCccccccccCC-ccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCC--------------C
Q 040826 223 TDVRGTIGYMDPEYMTNA-KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGK--------------R 287 (347)
Q Consensus 223 ~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~--------------~ 287 (347)
....++..|+|||.+.+. .++.++|+||||++++++++|..||...... +.+........... .
T Consensus 156 ~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (282)
T cd07829 156 THEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEI-DQLFKIFQILGTPTEESWPGVTKLPDYKP 234 (282)
T ss_pred CccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHHHHhCCCcHHHHHhhcccccccc
Confidence 233457789999998766 7889999999999999999999888654321 11111111110000 0
Q ss_pred CcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 288 PIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 288 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
............. -+.....+.+++.+||+.+|++||++.+++.
T Consensus 235 ~~~~~~~~~~~~~-~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 235 TFPKFPPKDLEKV-LPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred cccccCccchHHh-cccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 0000000000000 0112457999999999999999999999875
No 362
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=2.4e-36 Score=271.08 Aligned_cols=259 Identities=25% Similarity=0.289 Sum_probs=193.8
Q ss_pred HhcCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccC----CChhHHHHHHHHhhcCCCCcceeeeeEEEe-CCeEEE
Q 040826 64 AINNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKS----NNTDSFSREVEGLSRVRHPNLVCLFGCCVE-GGEQYL 137 (347)
Q Consensus 64 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~l 137 (347)
++++|...+.||.|+||.||++... +|+.+++|.+... .....+.+|+.+++.++|||++++.+++.. ....++
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~l 87 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYF 87 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEE
Confidence 5678888999999999999999844 7899999987542 234567789999999999999999998865 557899
Q ss_pred EEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCC
Q 040826 138 VYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217 (347)
Q Consensus 138 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 217 (347)
++||+. ++|.+++.. ..+++.....++.|+++||.||| +.+++|+||+|+||++++++.++|+|||.+.....
T Consensus 88 v~e~~~-~~L~~~~~~--~~~~~~~~~~~~~ql~~aL~~LH---~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~- 160 (328)
T cd07856 88 VTELLG-TDLHRLLTS--RPLEKQFIQYFLYQILRGLKYVH---SAGVVHRDLKPSNILINENCDLKICDFGLARIQDP- 160 (328)
T ss_pred Eeehhc-cCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEeECCCCCEEeCccccccccCC-
Confidence 999985 589887743 35788888899999999999999 88999999999999999999999999999875422
Q ss_pred ccceeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCC---------C
Q 040826 218 ESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGK---------R 287 (347)
Q Consensus 218 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~---------~ 287 (347)
......++..|+|||.+.+ ..++.++|+||||+++|+|++|+.||....... ......+...... .
T Consensus 161 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 236 (328)
T cd07856 161 ---QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVN-QFSIITDLLGTPPDDVINTICSE 236 (328)
T ss_pred ---CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHhccch
Confidence 1223456888999998765 578999999999999999999999986543211 1111111000000 0
Q ss_pred Cccccc-CCCCCCCCC-----HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 288 PIKDFE-DPRLNGNIN-----RADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 288 ~~~~~~-~~~l~~~~~-----~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
....+. .-......+ .....++.+++.+||+.+|++|||+.+++..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 237 NTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred hhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000 000000000 1123679999999999999999999998764
No 363
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=2.1e-36 Score=261.16 Aligned_cols=234 Identities=28% Similarity=0.323 Sum_probs=190.9
Q ss_pred eeecCCeeEEEEEeC-CCCEEEEEEcccCCC-----hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCCCCh
Q 040826 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN-----TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNL 147 (347)
Q Consensus 74 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 147 (347)
||+|+||.||++... +++.+++|.+..... ...+..|+.++++++|||++++++.+..+...+++|||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 689999999999965 588999998866432 34688899999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeecccC
Q 040826 148 AQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRG 227 (347)
Q Consensus 148 ~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 227 (347)
.+++.... .+++.....++.|+++|+.||| +.+++|+||+|+||+++.++.++|+|||++....... .......+
T Consensus 81 ~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lh---~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~ 155 (250)
T cd05123 81 FSHLSKEG-RFSEERARFYAAEIVLALEYLH---SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-SRTNTFCG 155 (250)
T ss_pred HHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcceEEEcCCCcEEEeecCcceecccCC-CcccCCcC
Confidence 99986543 5899999999999999999999 7899999999999999999999999999988754321 12334567
Q ss_pred CCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHH
Q 040826 228 TIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFE 307 (347)
Q Consensus 228 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 307 (347)
+..|++||...+...+.++|+||||+++|++++|..||..... .. ..........+ ++.....
T Consensus 156 ~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-~~----~~~~~~~~~~~------------~~~~~~~ 218 (250)
T cd05123 156 TPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-KE----IYEKILKDPLR------------FPEFLSP 218 (250)
T ss_pred CccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-HH----HHHHHhcCCCC------------CCCCCCH
Confidence 8899999999888889999999999999999999999864332 11 11111111111 1111235
Q ss_pred HHHHHHHHhccCCCCCCCCHHH
Q 040826 308 SILKIAVLCVAKSSKGRPTIDV 329 (347)
Q Consensus 308 ~l~~l~~~cl~~~p~~Rps~~e 329 (347)
.+.+++.+||..||++|||+.+
T Consensus 219 ~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 219 EARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred HHHHHHHHHhcCCHhhCCCccc
Confidence 7899999999999999999954
No 364
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-38 Score=296.75 Aligned_cols=252 Identities=23% Similarity=0.247 Sum_probs=207.6
Q ss_pred HHhcCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEccc-----CCChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEE
Q 040826 63 NAINNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYK-----SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQY 136 (347)
Q Consensus 63 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 136 (347)
...++|...+.||+|+||.|..++. .+++.||+|++.+ ..+...|+.|-.+|..-+.+=|+.++-.|.++.++|
T Consensus 72 l~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LY 151 (1317)
T KOG0612|consen 72 LKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLY 151 (1317)
T ss_pred CCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceE
Confidence 3467888899999999999999995 4789999999976 456678999999999999999999999999999999
Q ss_pred EEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCC
Q 040826 137 LVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM 216 (347)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 216 (347)
+||||++||+|..++.+.+ .+++..+.-+++.+..||.-|| +.|+|||||||+|||+|.+|.+||+|||.+-.+..
T Consensus 152 lVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH---~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~ 227 (1317)
T KOG0612|consen 152 LVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLH---SMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDA 227 (1317)
T ss_pred EEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHH---hccceeccCCcceeEecccCcEeeccchhHHhcCC
Confidence 9999999999999997666 7999999999999999999999 88999999999999999999999999999988775
Q ss_pred CccceeecccCCCCcccccccc----C-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCccc
Q 040826 217 EESKVFTDVRGTIGYMDPEYMT----N-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKD 291 (347)
Q Consensus 217 ~~~~~~~~~~~~~~y~aPE~~~----~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (347)
+........+|||.|.+||++. + +.|+..+|+||+|+++|||+.|.+||+ .+.+......+...... ..
T Consensus 228 dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFY-----adslveTY~KIm~hk~~-l~ 301 (1317)
T KOG0612|consen 228 DGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFY-----ADSLVETYGKIMNHKES-LS 301 (1317)
T ss_pred CCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcch-----HHHHHHHHHHHhchhhh-cC
Confidence 5555667789999999999985 3 568999999999999999999999998 44444444444333211 11
Q ss_pred ccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCC---HHHHHH
Q 040826 292 FEDPRLNGNINRADFESILKIAVLCVAKSSKGRPT---IDVVYE 332 (347)
Q Consensus 292 ~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps---~~ei~~ 332 (347)
|.+. .+.+++..+|+++.+ .+|+.|.. +++|-.
T Consensus 302 FP~~-------~~VSeeakdLI~~ll-~~~e~RLgrngiedik~ 337 (1317)
T KOG0612|consen 302 FPDE-------TDVSEEAKDLIEALL-CDREVRLGRNGIEDIKN 337 (1317)
T ss_pred CCcc-------cccCHHHHHHHHHHh-cChhhhcccccHHHHHh
Confidence 1100 123356777877666 78888887 666643
No 365
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.5e-37 Score=277.50 Aligned_cols=245 Identities=26% Similarity=0.340 Sum_probs=203.3
Q ss_pred hcCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCCCh----hHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEE
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNNT----DSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVY 139 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~----~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 139 (347)
...|.....||+|.|+.|.+++. .++..||+|.+.+.... ..+.+|+++|+.++||||++++.+......+|+||
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~ 134 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVM 134 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEE
Confidence 56678888999999999999994 47999999999875432 35789999999999999999999999999999999
Q ss_pred eecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcc
Q 040826 140 EFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES 219 (347)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 219 (347)
||+.+|.+.+++.+++. ..+..+..++.|+..|++||| +++|+|||||++|+|++.+.++||+|||++..+. ..
T Consensus 135 eya~~ge~~~yl~~~gr-~~e~~ar~~F~q~vsaveYcH---~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~--~~ 208 (596)
T KOG0586|consen 135 EYASGGELFDYLVKHGR-MKEKEARAKFRQIVSAVEYCH---SKNIVHRDLKAENILLDENMNIKIADFGFSTFFD--YG 208 (596)
T ss_pred EeccCchhHHHHHhccc-chhhhhhhhhHHHHHHHHHHh---hcceeccccchhhcccccccceeeeccccceeec--cc
Confidence 99999999999987665 455889999999999999999 8899999999999999999999999999999875 34
Q ss_pred ceeecccCCCCccccccccCCccC-CcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCC
Q 040826 220 KVFTDVRGTIGYMDPEYMTNAKLT-CASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLN 298 (347)
Q Consensus 220 ~~~~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 298 (347)
......+|++.|.|||++.+..|+ +.+|+||+|+++|.|+.|..||.+..-. ........+...+.
T Consensus 209 ~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk-----~Lr~rvl~gk~rIp-------- 275 (596)
T KOG0586|consen 209 LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLK-----ELRPRVLRGKYRIP-------- 275 (596)
T ss_pred ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccc-----cccchheeeeeccc--------
Confidence 445667899999999999987764 7999999999999999999999843211 11111112221111
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 299 GNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 299 ~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
.-...+..++++++|-.+|.+|+++++|.+
T Consensus 276 ----~~ms~dce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 276 ----FYMSCDCEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred ----ceeechhHHHHHHhhccCccccCCHHHhhh
Confidence 112245778888899999999999999865
No 366
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=7.8e-37 Score=276.02 Aligned_cols=260 Identities=24% Similarity=0.328 Sum_probs=194.8
Q ss_pred HHHHhcCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCCC----hhHHHHHHHHhhcCCCCcceeeeeEEEeCC--
Q 040826 61 IENAINNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSNN----TDSFSREVEGLSRVRHPNLVCLFGCCVEGG-- 133 (347)
Q Consensus 61 ~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-- 133 (347)
+....++|...+.||+|+||.||++.. .+|..||+|.+..... ...+.+|+.++++++||||+++++++....
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07880 10 IWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSL 89 (343)
T ss_pred hhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccc
Confidence 334567888899999999999999984 4789999998864322 235778999999999999999999887543
Q ss_pred ----eEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecc
Q 040826 134 ----EQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFG 209 (347)
Q Consensus 134 ----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg 209 (347)
..++|+||+ +++|.+++.. ..+++..++.++.|++.|+.||| +.|++|+||+|+||+++.++.++++|||
T Consensus 90 ~~~~~~~lv~e~~-~~~l~~~~~~--~~l~~~~~~~i~~qi~~al~~LH---~~gi~H~dlkp~Nill~~~~~~kl~dfg 163 (343)
T cd07880 90 DRFHDFYLVMPFM-GTDLGKLMKH--EKLSEDRIQFLVYQMLKGLKYIH---AAGIIHRDLKPGNLAVNEDCELKILDFG 163 (343)
T ss_pred cccceEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecc
Confidence 458999998 6689887753 45899999999999999999999 8899999999999999999999999999
Q ss_pred cceecCCCccceeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCC-
Q 040826 210 LAKMLGMEESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKR- 287 (347)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~- 287 (347)
++...... .....++..|+|||.+.+ ..++.++|+||||+++|++++|..||...... ...............
T Consensus 164 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~ 238 (343)
T cd07880 164 LARQTDSE----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHL-DQLMEIMKVTGTPSKE 238 (343)
T ss_pred cccccccC----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCHH
Confidence 98764321 223456889999998876 45888999999999999999999999754321 111111111000000
Q ss_pred ---------------CcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 288 ---------------PIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 288 ---------------~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
.........+ ..........+.+++.+|++.||.+|||+.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 239 FVQKLQSEDAKNYVKKLPRFRKKDF-RSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred HHHhhcchhHHHHHHhccccCcchH-HHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000000000 0011123346889999999999999999999984
No 367
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-38 Score=261.28 Aligned_cols=239 Identities=26% Similarity=0.282 Sum_probs=198.5
Q ss_pred hcCcccCCeeeecCCeeEEEEE-eCCCCEEEEEEcccC-----CChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEE
Q 040826 65 INNDWDRRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKS-----NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLV 138 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 138 (347)
.++|+..++||+|.||.|.+++ ..+|+.+|+|++++. .+......|-.+|+..+||.+..+--.++..+.+|+|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 4678888999999999999999 458999999999775 2345677899999999999999999889999999999
Q ss_pred EeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCc
Q 040826 139 YEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE 218 (347)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 218 (347)
|||..||.|.-++.+ ...+++...+-+-..|..||.||| +++|++||||.+|.|+|.+|.+||+|||++..-- ..
T Consensus 247 MeyanGGeLf~HLsr-er~FsE~RtRFYGaEIvsAL~YLH---s~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I-~~ 321 (516)
T KOG0690|consen 247 MEYANGGELFFHLSR-ERVFSEDRTRFYGAEIVSALGYLH---SRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEI-KY 321 (516)
T ss_pred EEEccCceEeeehhh-hhcccchhhhhhhHHHHHHhhhhh---hCCeeeeechhhhheeccCCceEeeecccchhcc-cc
Confidence 999999999888855 445889989889999999999999 8999999999999999999999999999998632 34
Q ss_pred cceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCC
Q 040826 219 SKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLN 298 (347)
Q Consensus 219 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 298 (347)
...++..+||+.|+|||++....|..++|+|.+|+++|||++|+.||.... ...- ..-+..++...
T Consensus 322 g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~d-h~kL----FeLIl~ed~kF--------- 387 (516)
T KOG0690|consen 322 GDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKD-HEKL----FELILMEDLKF--------- 387 (516)
T ss_pred cceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccc-hhHH----HHHHHhhhccC---------
Confidence 455778899999999999999999999999999999999999999998432 1122 22222222111
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCC
Q 040826 299 GNINRADFESILKIAVLCVAKSSKGRP 325 (347)
Q Consensus 299 ~~~~~~~~~~l~~l~~~cl~~~p~~Rp 325 (347)
+.....+...|+...|.+||.+|.
T Consensus 388 ---Pr~ls~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 388 ---PRTLSPEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred ---CccCCHHHHHHHHHHhhcChHhhc
Confidence 112234678888889999999995
No 368
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.9e-37 Score=279.59 Aligned_cols=241 Identities=24% Similarity=0.369 Sum_probs=194.0
Q ss_pred CCeeeecCCeeEEEEEeC-CCCEEEE---EE---cccCCChhHHHHHHHHhhcCCCCcceeeeeEEEeCCe--EEEEEee
Q 040826 71 RRFLGRGSAGLVYKGVLP-SGQVVAI---KH---IYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGE--QYLVYEF 141 (347)
Q Consensus 71 ~~~lg~G~~g~V~~~~~~-~~~~vav---K~---~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~--~~lv~e~ 141 (347)
...||+|+|-+||+|... +|-.||= |. .......+.|..|+.+|+.|+||||++++..+.+... .-+|+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 356999999999999954 5766662 21 1223344679999999999999999999999987554 7899999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecC-CCceEEeecccceecCCCccc
Q 040826 142 CAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTE-KLEPKLSDFGLAKMLGMEESK 220 (347)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~-~~~~kl~dfg~~~~~~~~~~~ 220 (347)
+..|+|..|..+.+ ..+...+..|++||+.||.|||++ ..+|+|||||-+||||+. -|.|||+|+|+|...... .
T Consensus 125 ~TSGtLr~Y~kk~~-~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s--~ 200 (632)
T KOG0584|consen 125 FTSGTLREYRKKHR-RVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS--H 200 (632)
T ss_pred ccCCcHHHHHHHhc-cCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhcc--c
Confidence 99999999997654 478899999999999999999987 679999999999999996 578999999999986422 2
Q ss_pred eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCC
Q 040826 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGN 300 (347)
Q Consensus 221 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 300 (347)
.....||+.|||||.+. ..|+..+||||||+.++||.|+..|+.--.. ...+.+.+..|..|. .+...
T Consensus 201 -aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n----~AQIYKKV~SGiKP~------sl~kV 268 (632)
T KOG0584|consen 201 -AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTN----PAQIYKKVTSGIKPA------ALSKV 268 (632)
T ss_pred -cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCC----HHHHHHHHHcCCCHH------Hhhcc
Confidence 22378999999999998 6899999999999999999999999874333 344455555554331 11111
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 301 INRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 301 ~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
-+ .++.+++.+|+.. ..+|||+.|+++
T Consensus 269 ~d----Pevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 269 KD----PEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred CC----HHHHHHHHHHhcC-chhccCHHHHhh
Confidence 12 4799999999998 999999999986
No 369
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=1.1e-36 Score=275.00 Aligned_cols=260 Identities=24% Similarity=0.340 Sum_probs=190.1
Q ss_pred cCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC--ChhHHHHHHHHhhcCCCCcceeeeeEEEeC----------
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN--NTDSFSREVEGLSRVRHPNLVCLFGCCVEG---------- 132 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~---------- 132 (347)
.+|...+.||.|+||.||+|.. .+|..|++|.+.... ....+.+|+++++.++|||++++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 5788889999999999999995 468999999886543 335678899999999999999999876543
Q ss_pred ----CeEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEec-CCCceEEee
Q 040826 133 ----GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLT-EKLEPKLSD 207 (347)
Q Consensus 133 ----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~-~~~~~kl~d 207 (347)
...++++||+++ +|.+++.. ..+++..+..++.|+++||.||| +.|++|+||||+||+++ +++.++++|
T Consensus 85 ~~~~~~~~lv~e~~~~-~L~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH---~~givH~dikp~Nili~~~~~~~kl~d 158 (342)
T cd07854 85 LTELNSVYIVQEYMET-DLANVLEQ--GPLSEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANVFINTEDLVLKIGD 158 (342)
T ss_pred ccccceEEEEeecccc-cHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCceEEECC
Confidence 357899999975 89887743 35889999999999999999999 78999999999999997 456789999
Q ss_pred cccceecCCCccc--eeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcC
Q 040826 208 FGLAKMLGMEESK--VFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSM 284 (347)
Q Consensus 208 fg~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~ 284 (347)
||.+......... ......++..|+|||.+.+ ..++.++|+||||+++|+|++|+.||......... .........
T Consensus 159 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~-~~~~~~~~~ 237 (342)
T cd07854 159 FGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQM-QLILESVPV 237 (342)
T ss_pred cccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHHhcCC
Confidence 9998765321111 1122357889999997654 56888999999999999999999999754332211 111110000
Q ss_pred CCC--------Ccccc-----cCCCC-CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 285 GKR--------PIKDF-----EDPRL-NGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 285 ~~~--------~~~~~-----~~~~l-~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
... ..... ..+.. ..........++.+++.+||+.||.+|||+.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 238 VREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred CChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 000 00000 00000 00001122357889999999999999999999984
No 370
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-38 Score=305.30 Aligned_cols=251 Identities=29% Similarity=0.376 Sum_probs=199.1
Q ss_pred HhcCcccCCeeeecCCeeEEEEE-eCCCCEEEEEEcccCC----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEE
Q 040826 64 AINNDWDRRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLV 138 (347)
Q Consensus 64 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 138 (347)
.+-++.....||.|.||.||-|. ..+|+..|+|.+.-.. .-..+.+|..++..++|||+|+++|+-...+..++.
T Consensus 1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHH
Confidence 34456667889999999999999 5679999999875432 223577899999999999999999999999999999
Q ss_pred EeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCc
Q 040826 139 YEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE 218 (347)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 218 (347)
||||++|+|.+.+... ....+-....+..|++.|++||| +.||+||||||.||+++.+|.+|++|||.|.......
T Consensus 1313 MEyC~~GsLa~ll~~g-ri~dE~vt~vyt~qll~gla~LH---~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~ 1388 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEHG-RIEDEMVTRVYTKQLLEGLAYLH---EHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNA 1388 (1509)
T ss_pred HHHhccCcHHHHHHhc-chhhhhHHHHHHHHHHHHHHHHH---hcCceecCCCccceeeecCCcEEeecccceeEecCch
Confidence 9999999999988543 33555566667899999999999 8999999999999999999999999999999875432
Q ss_pred ---cceeecccCCCCccccccccCC---ccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccc
Q 040826 219 ---SKVFTDVRGTIGYMDPEYMTNA---KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDF 292 (347)
Q Consensus 219 ---~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (347)
....+...||+.|||||++.+. ....+.||||+||+..||+||++|+..-.....-+..+. .|..|
T Consensus 1389 ~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~----~gh~P---- 1460 (1509)
T KOG4645|consen 1389 QTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVA----AGHKP---- 1460 (1509)
T ss_pred hcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHh----ccCCC----
Confidence 1224456799999999999763 456799999999999999999999973222222222221 22221
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 293 EDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 293 ~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
.++.....+-.+++..||..||++|.++.|+++.
T Consensus 1461 -------q~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1461 -------QIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred -------CCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 2333455678899999999999999888877764
No 371
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-37 Score=255.35 Aligned_cols=249 Identities=24% Similarity=0.343 Sum_probs=193.2
Q ss_pred CeeeecCCeeEEEEE-eCCCCEEEEEEcccCCC--hhHHHHHHHHhhcCC-CCcceeeeeEEEeCCeEEEEEeecCCCCh
Q 040826 72 RFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNN--TDSFSREVEGLSRVR-HPNLVCLFGCCVEGGEQYLVYEFCAAGNL 147 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~gsL 147 (347)
+.||+|+++.|--++ ..+|..+|||++.+... .....+|++++.+++ |+||+.++++|++++.+|||||.|.||+|
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGpl 163 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPL 163 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchH
Confidence 459999999999998 67999999999976533 456889999999995 99999999999999999999999999999
Q ss_pred HHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCc---eEEeecccceecCC------Cc
Q 040826 148 AQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLE---PKLSDFGLAKMLGM------EE 218 (347)
Q Consensus 148 ~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~---~kl~dfg~~~~~~~------~~ 218 (347)
..++++. ..+++.++.++.++|+.||.+|| .+||.|||+||+|||..+... +|||||.+..-... ..
T Consensus 164 LshI~~~-~~F~E~EAs~vvkdia~aLdFlH---~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spas 239 (463)
T KOG0607|consen 164 LSHIQKR-KHFNEREASRVVKDIASALDFLH---TKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPAS 239 (463)
T ss_pred HHHHHHh-hhccHHHHHHHHHHHHHHHHHHh---hcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCC
Confidence 9999653 45999999999999999999999 899999999999999976554 79999987764321 12
Q ss_pred cceeecccCCCCcccccccc-----CCccCCcccHHHHHHHHHHHHhCCCCcCCChhh----------hhHHHHHHhhhc
Q 040826 219 SKVFTDVRGTIGYMDPEYMT-----NAKLTCASDIYSFGIVALQLLSGQKVIELDFDA----------RDQLTRKARDVS 283 (347)
Q Consensus 219 ~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~----------~~~~~~~~~~~~ 283 (347)
.......+|+..|||||++. ...|+.++|.||||+++|-||+|.+||.+.=.. ..-.......+-
T Consensus 240 tP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQ 319 (463)
T KOG0607|consen 240 TPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQ 319 (463)
T ss_pred CccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHh
Confidence 22344567999999999763 346899999999999999999999999742110 111111222222
Q ss_pred CCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 284 MGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 284 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
.|... |.+..+ .....+..+|+...+-.++.+|.++..++.
T Consensus 320 EGkYe---FPdkdW-----ahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 320 EGKYE---FPDKDW-----AHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred ccCCc---CChhhh-----HHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 22221 111111 123456777888888899999999988875
No 372
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=9.2e-37 Score=275.63 Aligned_cols=257 Identities=23% Similarity=0.303 Sum_probs=194.1
Q ss_pred HhcCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCe----
Q 040826 64 AINNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGE---- 134 (347)
Q Consensus 64 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~---- 134 (347)
..++|...+.||+|++|.||+|... +++.|++|.+.... ....+.+|+.+++.++|||++++.+++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 4567888899999999999999964 68899999886432 23456789999999999999999988765544
Q ss_pred --EEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccce
Q 040826 135 --QYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAK 212 (347)
Q Consensus 135 --~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~ 212 (347)
.++|+||+ +++|.+++.. ..+++..+..++.|++.|+.||| +.|++|+||+|+||++++++.++|+|||.+.
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~ 166 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC--QKLSDDHIQFLVYQILRGLKYIH---SAGIIHRDLKPSNIAVNEDCELKILDFGLAR 166 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEccccccc
Confidence 89999998 5599998854 45899999999999999999999 7899999999999999999999999999988
Q ss_pred ecCCCccceeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCC---
Q 040826 213 MLGMEESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRP--- 288 (347)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--- 288 (347)
..... .....++..|+|||.+.+ ..++.++||||||+++|+|++|+.||...... ..+.............
T Consensus 167 ~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~ 241 (343)
T cd07851 167 HTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHI-DQLKRIMNLVGTPDEELLQ 241 (343)
T ss_pred ccccc----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHhcCCCCHHHHh
Confidence 65321 233457888999998865 46788999999999999999999998644321 1122111111000000
Q ss_pred ------ccccc-------CCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 289 ------IKDFE-------DPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 289 ------~~~~~-------~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
...+. .+.+. .........+.+++.+||+.+|.+|||+.+|++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 242 KISSESARNYIQSLPQMPKKDFK-EVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred hccchhHHHHHHhccccCCCCHH-HHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 00000 00000 000112467999999999999999999999875
No 373
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-37 Score=276.11 Aligned_cols=239 Identities=25% Similarity=0.291 Sum_probs=194.6
Q ss_pred hcCcccCCeeeecCCeeEEEEE-eCCCCEEEEEEcccCCChhHHHHHHHHhhcC-CCCcceeeeeEEEeCCeEEEEEeec
Q 040826 65 INNDWDRRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTDSFSREVEGLSRV-RHPNLVCLFGCCVEGGEQYLVYEFC 142 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 142 (347)
++.|.....+|.|+|+.|-.+. ..+++..++|++.+. ..+..+|+.++... +|||++++.+.+.+....++|||.+
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~--~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l 398 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR--ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELL 398 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheecccc--ccccccccchhhhhcCCCcceeecceecCCceeeeeehhc
Confidence 5677778889999999999998 557899999999766 23334566555555 6999999999999999999999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEe-cCCCceEEeecccceecCCCccce
Q 040826 143 AAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILL-TEKLEPKLSDFGLAKMLGMEESKV 221 (347)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili-~~~~~~kl~dfg~~~~~~~~~~~~ 221 (347)
.|+-+.+.+..... +. ..+..|+++++.|+.||| ++|++||||||+|||+ +..++++|+|||.++.....
T Consensus 399 ~g~ell~ri~~~~~-~~-~e~~~w~~~lv~Av~~LH---~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~---- 469 (612)
T KOG0603|consen 399 DGGELLRRIRSKPE-FC-SEASQWAAELVSAVDYLH---EQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS---- 469 (612)
T ss_pred cccHHHHHHHhcch-hH-HHHHHHHHHHHHHHHHHH---hcCeeecCCChhheeecCCCCcEEEEEechhhhCchh----
Confidence 99988888765443 33 788889999999999999 8999999999999999 58999999999999876433
Q ss_pred eecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCC
Q 040826 222 FTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNI 301 (347)
Q Consensus 222 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 301 (347)
....+-|..|.|||+.....|++++|+||||++||+||+|+.||.....+ ..+...+..+. +
T Consensus 470 ~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~----~ei~~~i~~~~--------------~ 531 (612)
T KOG0603|consen 470 CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG----IEIHTRIQMPK--------------F 531 (612)
T ss_pred hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch----HHHHHhhcCCc--------------c
Confidence 22345688999999999999999999999999999999999999865444 22222222221 1
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 302 NRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 302 ~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
+...++...+|+.+||+.||.+||++.++..
T Consensus 532 s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 532 SECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred ccccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 1233357999999999999999999999865
No 374
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=5.3e-36 Score=269.56 Aligned_cols=259 Identities=25% Similarity=0.298 Sum_probs=188.4
Q ss_pred CcccCCeeeecCCeeEEEEEeC-C--CCEEEEEEcccCC----ChhHHHHHHHHhhcC-CCCcceeeeeEEEeC----Ce
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLP-S--GQVVAIKHIYKSN----NTDSFSREVEGLSRV-RHPNLVCLFGCCVEG----GE 134 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~-~--~~~vavK~~~~~~----~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~----~~ 134 (347)
+|...+.||+|+||.||++... + +..+|+|.+.... ....+.+|+.+++++ +||||+++++..... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 3566778999999999999954 4 7789999886432 234677899999999 599999999875432 45
Q ss_pred EEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceec
Q 040826 135 QYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKML 214 (347)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~ 214 (347)
.+++++++.+ +|.+++.. ...+++..+..++.|++.||.||| +.|++|+||||+||+++.++.++|+|||++...
T Consensus 81 ~~~~~e~~~~-~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH---~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~ 155 (332)
T cd07857 81 LYLYEELMEA-DLHQIIRS-GQPLTDAHFQSFIYQILCGLKYIH---SANVLHRDLKPGNLLVNADCELKICDFGLARGF 155 (332)
T ss_pred EEEEEecccC-CHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHeEEcCCCCEEeCcCCCceec
Confidence 7888998864 89888854 345899999999999999999999 889999999999999999999999999999865
Q ss_pred CCCcc---ceeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCC---
Q 040826 215 GMEES---KVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKR--- 287 (347)
Q Consensus 215 ~~~~~---~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~--- 287 (347)
..... .......++..|+|||.+.+ ..++.++|+||+|+++|+|++|..||...... ...............
T Consensus 156 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~ 234 (332)
T cd07857 156 SENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYV-DQLNQILQVLGTPDEETL 234 (332)
T ss_pred ccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHH-HHHHHHHHHhCCCCHHHH
Confidence 42211 11223468899999998765 56889999999999999999999998643211 111111111000000
Q ss_pred ------C-------cccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 288 ------P-------IKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 288 ------~-------~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
. ........+. .........+.+++.+||+.||.+|||+.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 235 SRIGSPKAQNYIRSLPNIPKKPFE-SIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HhhhhhhHHHHHHhccccCCcchH-hhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0 0000000000 001112357999999999999999999999874
No 375
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-36 Score=256.55 Aligned_cols=255 Identities=22% Similarity=0.322 Sum_probs=204.1
Q ss_pred hcCcccCCeeeecCCeeEEEEEeC------CCCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEe-CCe
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVLP------SGQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVE-GGE 134 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~ 134 (347)
..++....++-+|.||.||.|.+. +.+.|.+|.+..... ...+..|.-.+..++|||+..+.+++.+ ...
T Consensus 283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~ 362 (563)
T KOG1024|consen 283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYAT 362 (563)
T ss_pred hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCc
Confidence 455777778899999999999643 345677887765433 3468889999999999999999998865 457
Q ss_pred EEEEEeecCCCChHHHhhc-------CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEee
Q 040826 135 QYLVYEFCAAGNLAQHLLR-------KDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSD 207 (347)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~-------~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~d 207 (347)
.++++.++..|+|..++.. ..+.++..+...++.|++.|++||| +.+++|.||..+|.+|++...+||+|
T Consensus 363 P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh---~~~ViHkDiAaRNCvIdd~LqVkltD 439 (563)
T KOG1024|consen 363 PFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLH---NHGVIHKDIAARNCVIDDQLQVKLTD 439 (563)
T ss_pred ceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHH---hcCcccchhhhhcceehhheeEEecc
Confidence 8899999999999999972 2355777888999999999999999 89999999999999999999999999
Q ss_pred cccceecCCCccceeec-ccCCCCccccccccCCccCCcccHHHHHHHHHHHHhC-CCCcCCChhhhhHHHHHHhhhcCC
Q 040826 208 FGLAKMLGMEESKVFTD-VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG-QKVIELDFDARDQLTRKARDVSMG 285 (347)
Q Consensus 208 fg~~~~~~~~~~~~~~~-~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg-~~p~~~~~~~~~~~~~~~~~~~~~ 285 (347)
-.+++.+-+.+....+. ...+..||+||.+.+..|+.++|+||||+++|||+|. +.|+. +.++.+ ....+..|
T Consensus 440 saLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~Pya-eIDPfE----m~~ylkdG 514 (563)
T KOG1024|consen 440 SALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYA-EIDPFE----MEHYLKDG 514 (563)
T ss_pred chhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCcc-ccCHHH----HHHHHhcc
Confidence 99999876666655433 3468899999999999999999999999999999984 55544 333322 22222223
Q ss_pred CCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 040826 286 KRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAW 338 (347)
Q Consensus 286 ~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~ 338 (347)
.+- -.+-+|+++++.+|.-||+..|++|||++++..-|.+..
T Consensus 515 yRl-----------aQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~ 556 (563)
T KOG1024|consen 515 YRL-----------AQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFH 556 (563)
T ss_pred cee-----------cCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence 221 122356789999999999999999999999999888763
No 376
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=7.4e-37 Score=254.17 Aligned_cols=264 Identities=24% Similarity=0.326 Sum_probs=199.7
Q ss_pred hcCcccCCeeeecCCeeEEEEEe-CC----CCEEEEEEcccCCC----hhHHHHHHHHhhcCCCCcceeeeeEEEe-CCe
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVL-PS----GQVVAIKHIYKSNN----TDSFSREVEGLSRVRHPNLVCLFGCCVE-GGE 134 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~-~~----~~~vavK~~~~~~~----~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~ 134 (347)
...|.....||+|.||.||++.- ++ ...+|+|++...++ .....+|+.+++.++|||++.+..++.+ +..
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK 102 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence 45677788899999999999963 22 23789999977633 4578899999999999999999999877 789
Q ss_pred EEEEEeecCCCChHHHhhc----CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCC----CceEEe
Q 040826 135 QYLVYEFCAAGNLAQHLLR----KDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEK----LEPKLS 206 (347)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~----~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~----~~~kl~ 206 (347)
.++++||.+. +|...++- ....++...+..++.||+.|+.||| ++-+.||||||.|||+..+ |.+||+
T Consensus 103 v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH---~NWvlHRDLKPaNIlvmgdgperG~VKIa 178 (438)
T KOG0666|consen 103 VWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLH---SNWVLHRDLKPANILVMGDGPERGRVKIA 178 (438)
T ss_pred EEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHh---hhheeeccCCcceEEEeccCCccCeeEee
Confidence 9999999998 89888842 2356889999999999999999999 8889999999999999887 899999
Q ss_pred ecccceecCCCccc--eeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChh--------hhhHH
Q 040826 207 DFGLAKMLGMEESK--VFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFD--------ARDQL 275 (347)
Q Consensus 207 dfg~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~--------~~~~~ 275 (347)
|+|+++.+...-.. .....+.|.+|.|||.+.| ..|+++.|+||+|||+.||+|.++.|.+... ..+++
T Consensus 179 DlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl 258 (438)
T KOG0666|consen 179 DLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQL 258 (438)
T ss_pred cccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHH
Confidence 99999987542222 2344678999999999987 4699999999999999999999988865322 12333
Q ss_pred HHHHhhhcCCC-------CCccc-------ccCCCCCCCCC-HH-------HHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 276 TRKARDVSMGK-------RPIKD-------FEDPRLNGNIN-RA-------DFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 276 ~~~~~~~~~~~-------~~~~~-------~~~~~l~~~~~-~~-------~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
..+........ .++++ +..... .+.+ .. -....++|+..+|..||.+|.|+++.++.
T Consensus 259 ~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~-~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh 337 (438)
T KOG0666|consen 259 DRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYY-DNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEH 337 (438)
T ss_pred HHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhc-CcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcc
Confidence 43333321110 00110 000000 0100 00 01347888999999999999999998764
No 377
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=1.6e-35 Score=253.77 Aligned_cols=220 Identities=23% Similarity=0.236 Sum_probs=174.8
Q ss_pred cCCeeEEEEEe-CCCCEEEEEEcccCCChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCCCChHHHhhcCC
Q 040826 77 GSAGLVYKGVL-PSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKD 155 (347)
Q Consensus 77 G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~ 155 (347)
|.+|.||++.. .+|+.+|+|.+..... ...|...+....|||++++++++......+++|||+++|+|.+++....
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~ 80 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSE---YSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFL 80 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhh---hhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHhc
Confidence 89999999995 4789999999866432 3345555555679999999999999999999999999999999886543
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeecccCCCCccccc
Q 040826 156 SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPE 235 (347)
Q Consensus 156 ~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE 235 (347)
.+++..+..++.|+++||.||| +.+++|+||||+||+++.++.++++|||.+...... .....++..|+|||
T Consensus 81 -~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----~~~~~~~~~y~aPE 152 (237)
T cd05576 81 -NIPEECVKRWAAEMVVALDALH---REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----CDGEAVENMYCAPE 152 (237)
T ss_pred -CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEecccchhccccc----cccCCcCccccCCc
Confidence 4899999999999999999999 889999999999999999999999999987654321 12234567899999
Q ss_pred cccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHH
Q 040826 236 YMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVL 315 (347)
Q Consensus 236 ~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~ 315 (347)
...+..++.++|+||+|+++|+|++|..|+...... . ...... .++......+.+++.+
T Consensus 153 ~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~----------~-------~~~~~~----~~~~~~~~~~~~li~~ 211 (237)
T cd05576 153 VGGISEETEACDWWSLGAILFELLTGKTLVECHPSG----------I-------NTHTTL----NIPEWVSEEARSLLQQ 211 (237)
T ss_pred ccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh----------c-------cccccc----CCcccCCHHHHHHHHH
Confidence 998888899999999999999999999876421100 0 000000 1111233578999999
Q ss_pred hccCCCCCCCCHH
Q 040826 316 CVAKSSKGRPTID 328 (347)
Q Consensus 316 cl~~~p~~Rps~~ 328 (347)
||+.||.+|||+.
T Consensus 212 ~l~~dp~~R~~~~ 224 (237)
T cd05576 212 LLQFNPTERLGAG 224 (237)
T ss_pred HccCCHHHhcCCC
Confidence 9999999999973
No 378
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=4.7e-35 Score=284.31 Aligned_cols=143 Identities=31% Similarity=0.443 Sum_probs=128.3
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC-----hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN-----TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVY 139 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 139 (347)
++|...++||+|+||.||+|... +++.||+|++..... ...+..|+.+++.++||||+++++++......++||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57788899999999999999965 689999999865432 246778999999999999999999999999999999
Q ss_pred eecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccce
Q 040826 140 EFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAK 212 (347)
Q Consensus 140 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~ 212 (347)
||+.+++|.+++... ..+++..++.++.|++.||.||| ..+|+||||||+|||++.++.++|+|||+++
T Consensus 84 Ey~~g~~L~~li~~~-~~l~~~~~~~i~~qil~aL~yLH---~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHIY-GYFDEEMAVKYISEVALALDYLH---RHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999999988653 35889999999999999999999 7899999999999999999999999999875
No 379
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-36 Score=262.59 Aligned_cols=252 Identities=24% Similarity=0.331 Sum_probs=193.9
Q ss_pred cccCCeeeecCCeeEEEEE-eCCCCEEEEEEcccCCCh---------hHHHHHHHHhhcCCCCcceeeeeEEE-eCCeEE
Q 040826 68 DWDRRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNT---------DSFSREVEGLSRVRHPNLVCLFGCCV-EGGEQY 136 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~---------~~~~~e~~~l~~l~h~niv~~~~~~~-~~~~~~ 136 (347)
|-..++||+|||+.||++. +...+.||+|+-.-..+. ....+|..+.+.|.||.||++++++. +.+.+|
T Consensus 465 YLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFC 544 (775)
T KOG1151|consen 465 YLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFC 544 (775)
T ss_pred HHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccce
Confidence 4555789999999999999 556788999976433222 24678999999999999999999986 566889
Q ss_pred EEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecC---CCceEEeeccccee
Q 040826 137 LVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTE---KLEPKLSDFGLAKM 213 (347)
Q Consensus 137 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~---~~~~kl~dfg~~~~ 213 (347)
-|+|||+|.+|.-++.++ ..+++.+++.|+.||+.||.||... +.+|+|.||||.|||+.+ .|.+||+|||++..
T Consensus 545 TVLEYceGNDLDFYLKQh-klmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKI 622 (775)
T KOG1151|consen 545 TVLEYCEGNDLDFYLKQH-KLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKI 622 (775)
T ss_pred eeeeecCCCchhHHHHhh-hhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecchhhh
Confidence 999999998998888654 4589999999999999999999765 789999999999999964 57899999999998
Q ss_pred cCCCccc------eeecccCCCCcccccccc-C---CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhc
Q 040826 214 LGMEESK------VFTDVRGTIGYMDPEYMT-N---AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVS 283 (347)
Q Consensus 214 ~~~~~~~------~~~~~~~~~~y~aPE~~~-~---~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~ 283 (347)
+..+... .++...||++|++||++. + ..++.++||||+|+|+|..+.|++||.......+-+... .+.
T Consensus 623 MdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeN--TIl 700 (775)
T KOG1151|consen 623 MDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQEN--TIL 700 (775)
T ss_pred ccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhh--chh
Confidence 8643332 244567999999999874 2 358899999999999999999999998665443322211 110
Q ss_pred CCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 284 MGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 284 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
. .+.+.- +..+-...+...++.+||+.--++|....++..
T Consensus 701 k-AtEVqF--------P~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 701 K-ATEVQF--------PPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred c-ceeccC--------CCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 0 011110 011122246888999999999888988877654
No 380
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=1.3e-34 Score=248.18 Aligned_cols=236 Identities=31% Similarity=0.435 Sum_probs=192.4
Q ss_pred CCeeEEEEEeC-CCCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCCCChHHHhhc
Q 040826 78 SAGLVYKGVLP-SGQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLR 153 (347)
Q Consensus 78 ~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 153 (347)
+||.||+|... +|+.+++|.+..... ...+.+|++.+++++|+|++++++++......++++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999975 589999999976544 56889999999999999999999999999999999999999999998865
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeecccCCCCccc
Q 040826 154 KDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMD 233 (347)
Q Consensus 154 ~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~a 233 (347)
... +++..++.++.+++.++.+|| +.+++|+||+|+||++++++.++++|||.+....... ......++..|++
T Consensus 81 ~~~-~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~~~ 154 (244)
T smart00220 81 RGR-LSEDEARFYARQILSALEYLH---SNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--LLTTFVGTPEYMA 154 (244)
T ss_pred ccC-CCHHHHHHHHHHHHHHHHHHH---HcCeecCCcCHHHeEECCCCcEEEccccceeeecccc--ccccccCCcCCCC
Confidence 443 899999999999999999999 7899999999999999999999999999998764321 3344568889999
Q ss_pred cccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHH
Q 040826 234 PEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIA 313 (347)
Q Consensus 234 PE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~ 313 (347)
||...+..++.++|+||||++++++++|..|+......... ......+..... ........++.+++
T Consensus 155 pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~----~~~~~~~~~~~~---------~~~~~~~~~~~~~i 221 (244)
T smart00220 155 PEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLEL----FKKIGKPKPPFP---------PPEWKISPEAKDLI 221 (244)
T ss_pred HHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHH----HHHHhccCCCCc---------cccccCCHHHHHHH
Confidence 99998888899999999999999999999998653222111 111111111100 00000335799999
Q ss_pred HHhccCCCCCCCCHHHHHH
Q 040826 314 VLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 314 ~~cl~~~p~~Rps~~ei~~ 332 (347)
.+||..+|++||++.++++
T Consensus 222 ~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 222 RKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHccCCchhccCHHHHhh
Confidence 9999999999999999986
No 381
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-35 Score=252.88 Aligned_cols=239 Identities=23% Similarity=0.304 Sum_probs=193.8
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccC-----CChhHHHHHHHHhhcC-CCCcceeeeeEEEeCCeEEEE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKS-----NNTDSFSREVEGLSRV-RHPNLVCLFGCCVEGGEQYLV 138 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-----~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv 138 (347)
.+|.....||+|+||.|.++.-+ +.+.+|||++.++ .+.+-...|-.+|... +-|.++.+..++.+-+.+|+|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 46677888999999999999854 5678999999775 3334455677777665 478899999999999999999
Q ss_pred EeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCc
Q 040826 139 YEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE 218 (347)
Q Consensus 139 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 218 (347)
|||+.||+|--.+++-+ .+.++.+.-++..||-||-+|| ++||++||||.+|||++.+|.+||+|||++...- -.
T Consensus 429 MEyvnGGDLMyhiQQ~G-kFKEp~AvFYAaEiaigLFFLh---~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni-~~ 503 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQVG-KFKEPVAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI-FD 503 (683)
T ss_pred EEEecCchhhhHHHHhc-ccCCchhhhhhHHHHHHhhhhh---cCCeeeeeccccceEeccCCceEeeecccccccc-cC
Confidence 99999999988886654 4888899999999999999999 9999999999999999999999999999998643 23
Q ss_pred cceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCC
Q 040826 219 SKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLN 298 (347)
Q Consensus 219 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 298 (347)
...+...+||+.|+|||++...+|+.++|+||+|++||||+.|++||.+... +.+. +.+.....
T Consensus 504 ~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE--~elF---~aI~ehnv----------- 567 (683)
T KOG0696|consen 504 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE--DELF---QAIMEHNV----------- 567 (683)
T ss_pred CcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCH--HHHH---HHHHHccC-----------
Confidence 3445678899999999999999999999999999999999999999985432 2222 22221111
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCC
Q 040826 299 GNINRADFESILKIAVLCVAKSSKGRPT 326 (347)
Q Consensus 299 ~~~~~~~~~~l~~l~~~cl~~~p~~Rps 326 (347)
.++...+.+...++...+.+.|.+|..
T Consensus 568 -syPKslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 568 -SYPKSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred -cCcccccHHHHHHHHHHhhcCCccccC
Confidence 233344467788888899999999954
No 382
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-36 Score=264.94 Aligned_cols=241 Identities=27% Similarity=0.362 Sum_probs=195.8
Q ss_pred cCCeeeecCCeeEEEEE-eCCCCEEEEEEcccC----CChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCC
Q 040826 70 DRRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKS----NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAA 144 (347)
Q Consensus 70 ~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 144 (347)
..+.||+|.||+||-|+ -++|+.||||++.+- .....+.+|+.+|..++||.||.+...+++.+..++|||.+.|
T Consensus 568 ~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G 647 (888)
T KOG4236|consen 568 ADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG 647 (888)
T ss_pred hHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc
Confidence 34679999999999999 568999999998653 4456899999999999999999999999999999999999977
Q ss_pred CChHHHh-hcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCC---CceEEeecccceecCCCccc
Q 040826 145 GNLAQHL-LRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEK---LEPKLSDFGLAKMLGMEESK 220 (347)
Q Consensus 145 gsL~~~l-~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~---~~~kl~dfg~~~~~~~~~~~ 220 (347)
+..+.+ ....+.+++....-+..||+.||.||| -++|+|+||||+|||+... ..+||||||.++..+....
T Consensus 648 -DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH---~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksF- 722 (888)
T KOG4236|consen 648 -DMLEMILSSEKGRLPERITKFLVTQILVALRYLH---FKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSF- 722 (888)
T ss_pred -hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhh---hcceeeccCCchheeeccCCCCCceeeccccceeecchhhh-
Confidence 555555 445577999999999999999999999 8899999999999999753 4699999999999753322
Q ss_pred eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCC
Q 040826 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGN 300 (347)
Q Consensus 221 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 300 (347)
....+||+.|+|||++.++.|+..-|+||+|+++|.-++|.-||.-+.+-.+++...+--. .|.-..+
T Consensus 723 -RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMy-----------Pp~PW~e 790 (888)
T KOG4236|consen 723 -RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMY-----------PPNPWSE 790 (888)
T ss_pred -hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhcccccc-----------CCCchhh
Confidence 3457899999999999999999999999999999999999999986655555444322111 1111223
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHH
Q 040826 301 INRADFESILKIAVLCVAKSSKGRPTIDVVY 331 (347)
Q Consensus 301 ~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~ 331 (347)
+. ++..+|+...|+..-.+|-|...-+
T Consensus 791 is----~~AidlIn~LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 791 IS----PEAIDLINNLLQVKMRKRYSVDKSL 817 (888)
T ss_pred cC----HHHHHHHHHHHHHHHHHhcchHhhc
Confidence 33 4577777778888888888877654
No 383
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-35 Score=232.20 Aligned_cols=210 Identities=26% Similarity=0.359 Sum_probs=174.5
Q ss_pred CcccCCeeeecCCeeEEEEE-eCCCCEEEEEEcccCCCh---hHHHHHHHHhhcC-CCCcceeeeeEEEeCCeEEEEEee
Q 040826 67 NDWDRRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNT---DSFSREVEGLSRV-RHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~---~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
.......||+|++|.|-+-+ ..+|...|+|++...-+. ....+|+++..+. .+|.+|.++|.+......++.||.
T Consensus 47 ~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~ 126 (282)
T KOG0984|consen 47 DLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMEL 126 (282)
T ss_pred hhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHH
Confidence 33344669999999998888 458999999999765443 3566777765554 699999999999999999999999
Q ss_pred cCCCChHHHhh---cCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCc
Q 040826 142 CAAGNLAQHLL---RKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE 218 (347)
Q Consensus 142 ~~~gsL~~~l~---~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 218 (347)
|+. ||..+.. ..+..+++..+-+|+..+..||.|||+ ...++|||+||+||||+.+|.+|+||||.+..+. +
T Consensus 127 M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~--d 201 (282)
T KOG0984|consen 127 MDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICDFGISGYLV--D 201 (282)
T ss_pred hhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEcccccceeeh--h
Confidence 987 8887764 367789999999999999999999998 5689999999999999999999999999998764 3
Q ss_pred cceeecccCCCCcccccccc----CCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhh
Q 040826 219 SKVFTDVRGTIGYMDPEYMT----NAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARD 281 (347)
Q Consensus 219 ~~~~~~~~~~~~y~aPE~~~----~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~ 281 (347)
+-..+...|...|||||.+. ...|+.++||||||+++.||.+++.|+......-.++..++.+
T Consensus 202 SiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVee 268 (282)
T KOG0984|consen 202 SIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEE 268 (282)
T ss_pred hhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcC
Confidence 33344456888999999875 3479999999999999999999999998777666666665544
No 384
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.4e-37 Score=247.36 Aligned_cols=261 Identities=23% Similarity=0.357 Sum_probs=195.5
Q ss_pred cccCCeeeecCCeeEEEEE-eCCCCEEEEEEcccCCC----hhHHHHHHHHhhcCCCCcceeeeeEEEe--------CCe
Q 040826 68 DWDRRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNN----TDSFSREVEGLSRVRHPNLVCLFGCCVE--------GGE 134 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~h~niv~~~~~~~~--------~~~ 134 (347)
|.-..++|+|.||.||++. -++|+.||+|++....+ .....+|+.+|..++|+|++.+++.|.. ...
T Consensus 19 yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t 98 (376)
T KOG0669|consen 19 YEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRAT 98 (376)
T ss_pred HHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccce
Confidence 4445679999999999999 45688899987765332 3467899999999999999999988753 235
Q ss_pred EEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceec
Q 040826 135 QYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKML 214 (347)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~ 214 (347)
+++||.+|+. +|...+.+....++..++.+++.++..||.|+| ...|+|||+||.|+||+.+|.++|+|||+++.+
T Consensus 99 ~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iH---r~kilHRDmKaaNvLIt~dgilklADFGlar~f 174 (376)
T KOG0669|consen 99 FYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIH---RNKILHRDMKAANVLITKDGILKLADFGLARAF 174 (376)
T ss_pred eeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHH---HhhHHhhcccHhhEEEcCCceEEeeccccccce
Confidence 8999999998 999988776678999999999999999999999 788999999999999999999999999999765
Q ss_pred CCCccc---eeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHh-------hhc
Q 040826 215 GMEESK---VFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKAR-------DVS 283 (347)
Q Consensus 215 ~~~~~~---~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~-------~~~ 283 (347)
...... ..+..+.|.+|.+||.+.| ..|+++.|+|..||++.+|+|+.+.+++.... .++..+.. +.+
T Consensus 175 s~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteq-qql~~Is~LcGs~tkevW 253 (376)
T KOG0669|consen 175 STSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQ-QQLHLISQLCGSITKEVW 253 (376)
T ss_pred ecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHH-HHHHHHHHHhccCCcccC
Confidence 432221 1334567999999998876 57999999999999999999999988754332 22211111 111
Q ss_pred CCCCCc---ccccCCCCCCCCC---HHHH------HHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 284 MGKRPI---KDFEDPRLNGNIN---RADF------ESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 284 ~~~~~~---~~~~~~~l~~~~~---~~~~------~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
.+...+ ..+..+.+..... ++-. .+..+|+..++..||++|+++.+++..
T Consensus 254 P~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 254 PNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred CCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 111111 1111111111000 0111 367889999999999999999998754
No 385
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=253.64 Aligned_cols=261 Identities=18% Similarity=0.199 Sum_probs=199.4
Q ss_pred HhcCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC-hhHHHHHHHHhhcCC--CC----cceeeeeEEEeCCeE
Q 040826 64 AINNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN-TDSFSREVEGLSRVR--HP----NLVCLFGCCVEGGEQ 135 (347)
Q Consensus 64 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~--h~----niv~~~~~~~~~~~~ 135 (347)
.+++|.....+|+|.||.|-.+... ++..||+|+++.-.. .+...-|++++.++. .| -++.+.++++..++.
T Consensus 87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi 166 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI 166 (415)
T ss_pred cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence 3788999999999999999999844 578999999876433 345667999999994 22 367788889999999
Q ss_pred EEEEeecCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEec----------------
Q 040826 136 YLVYEFCAAGNLAQHLLRK-DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLT---------------- 198 (347)
Q Consensus 136 ~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~---------------- 198 (347)
|+|+|.+ |.|+.+++..+ -.+++...++.+..|+++++++|| +.+++|-||||+||++.
T Consensus 167 Civfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh---~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~ 242 (415)
T KOG0671|consen 167 CIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLH---DLKLTHTDLKPENILFVSSEYFKTYNPKKKVCF 242 (415)
T ss_pred EEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHH---hcceeecCCChheEEEeccceEEEeccCCccce
Confidence 9999998 44999999764 467999999999999999999999 88999999999999983
Q ss_pred ----CCCceEEeecccceecCCCccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhH
Q 040826 199 ----EKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQ 274 (347)
Q Consensus 199 ----~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~ 274 (347)
.+..++++|||.++.-. ...+..+.|..|.|||++.+-+++.++||||+||||+|+.||...|+... ..+.
T Consensus 243 ~r~~ks~~I~vIDFGsAtf~~----e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHe-n~EH 317 (415)
T KOG0671|consen 243 IRPLKSTAIKVIDFGSATFDH----EHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHE-NLEH 317 (415)
T ss_pred eccCCCcceEEEecCCcceec----cCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCC-cHHH
Confidence 13458999999998743 22356678999999999999999999999999999999999999987433 2333
Q ss_pred HHHHHhhhcCCCCCc--------------------------ccccCCCC--C--CCCCHHHHHHHHHHHHHhccCCCCCC
Q 040826 275 LTRKARDVSMGKRPI--------------------------KDFEDPRL--N--GNINRADFESILKIAVLCVAKSSKGR 324 (347)
Q Consensus 275 ~~~~~~~~~~~~~~~--------------------------~~~~~~~l--~--~~~~~~~~~~l~~l~~~cl~~~p~~R 324 (347)
+....+....-+..+ ....++.. . -........++.+|+.++|..||.+|
T Consensus 318 LaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~R 397 (415)
T KOG0671|consen 318 LAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARR 397 (415)
T ss_pred HHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCcccc
Confidence 322222211110000 00000000 0 01122445789999999999999999
Q ss_pred CCHHHHHHH
Q 040826 325 PTIDVVYEE 333 (347)
Q Consensus 325 ps~~ei~~~ 333 (347)
+|+.|++.+
T Consensus 398 iTl~EAL~H 406 (415)
T KOG0671|consen 398 ITLREALSH 406 (415)
T ss_pred ccHHHHhcC
Confidence 999999853
No 386
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=7.9e-35 Score=276.28 Aligned_cols=262 Identities=21% Similarity=0.223 Sum_probs=169.3
Q ss_pred HhcCcccCCeeeecCCeeEEEEEeC-C----CCEEEEEEcccCCChhHHHHHHHHhhcCCCCcceeeeeE------EEeC
Q 040826 64 AINNDWDRRFLGRGSAGLVYKGVLP-S----GQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGC------CVEG 132 (347)
Q Consensus 64 ~~~~~~~~~~lg~G~~g~V~~~~~~-~----~~~vavK~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~------~~~~ 132 (347)
..++|...+.||+|+||.||+|... + +..||+|++......+....+ .+++..+.++..+... ....
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~~ 207 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVEIWMNE--RVRRACPNSCADFVYGFLEPVSSKKE 207 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhHHHHHH--HHHhhchhhHHHHHHhhhcccccccC
Confidence 3567888999999999999999964 4 689999988654433322222 1222222222222211 2345
Q ss_pred CeEEEEEeecCCCChHHHhhcCCCC-------------------CCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCC
Q 040826 133 GEQYLVYEFCAAGNLAQHLLRKDSV-------------------LTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLT 193 (347)
Q Consensus 133 ~~~~lv~e~~~~gsL~~~l~~~~~~-------------------~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~ 193 (347)
...++|+||+.+++|.+++...... .....+..++.|++.||.||| +++|+||||||+
T Consensus 208 ~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH---~~gIiHRDLKP~ 284 (566)
T PLN03225 208 DEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLH---STGIVHRDVKPQ 284 (566)
T ss_pred CceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHH---HCCEEeCcCCHH
Confidence 6889999999999999988643311 122345679999999999999 889999999999
Q ss_pred CEEecC-CCceEEeecccceecCCCccceeecccCCCCccccccccCC----------------------ccCCcccHHH
Q 040826 194 NILLTE-KLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNA----------------------KLTCASDIYS 250 (347)
Q Consensus 194 Nili~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~----------------------~~~~~~Dv~s 250 (347)
|||++. ++.+||+|||++...............+++.|+|||.+... .++.++||||
T Consensus 285 NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwS 364 (566)
T PLN03225 285 NIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYS 364 (566)
T ss_pred HEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHH
Confidence 999985 67999999999986543333333455788999999965322 2334679999
Q ss_pred HHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCC----CCC--CCCHHHHHHHHHHHHHhccCCCCCC
Q 040826 251 FGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPR----LNG--NINRADFESILKIAVLCVAKSSKGR 324 (347)
Q Consensus 251 lG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~--~~~~~~~~~l~~l~~~cl~~~p~~R 324 (347)
|||++|||+++..++.... ..+...................+. +.. ...........+|+.+||+.||.+|
T Consensus 365 lGviL~el~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR 441 (566)
T PLN03225 365 AGLIFLQMAFPNLRSDSNL---IQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQR 441 (566)
T ss_pred HHHHHHHHHhCcCCCchHH---HHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccC
Confidence 9999999999765543211 111111100000000000000000 000 0000112345689999999999999
Q ss_pred CCHHHHHHH
Q 040826 325 PTIDVVYEE 333 (347)
Q Consensus 325 ps~~ei~~~ 333 (347)
||+.+++++
T Consensus 442 ~ta~e~L~H 450 (566)
T PLN03225 442 ISAKAALAH 450 (566)
T ss_pred CCHHHHhCC
Confidence 999999874
No 387
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-34 Score=267.80 Aligned_cols=251 Identities=28% Similarity=0.411 Sum_probs=204.5
Q ss_pred hcCcccCCeeeecCCeeEEEEE-eCCCCEEEEEEcccCCC-hhHHHHHHHHhhcC-CCCcceeeeeEEEe-----CCeEE
Q 040826 65 INNDWDRRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNN-TDSFSREVEGLSRV-RHPNLVCLFGCCVE-----GGEQY 136 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l-~h~niv~~~~~~~~-----~~~~~ 136 (347)
++.|...+.+|.|.+|.||+++ .++|+.+|+|+.....+ .++...|.++++.. +|||++.++|++.. ++.++
T Consensus 18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLW 97 (953)
T KOG0587|consen 18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLW 97 (953)
T ss_pred CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEE
Confidence 4455666789999999999999 56899999999988655 45677888998888 59999999999864 56899
Q ss_pred EEEeecCCCChHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecC
Q 040826 137 LVYEFCAAGNLAQHLLR-KDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLG 215 (347)
Q Consensus 137 lv~e~~~~gsL~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 215 (347)
||||||.+||..|++++ .+..+.|..+.-|++.++.|+.+|| .+.++|||+|-.|||++.++.+|++|||++..+.
T Consensus 98 LVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH---~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQld 174 (953)
T KOG0587|consen 98 LVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLH---NNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 174 (953)
T ss_pred EEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHh---hcceeeecccCceEEEeccCcEEEeeeeeeeeee
Confidence 99999999999999965 3677999999999999999999999 8889999999999999999999999999998875
Q ss_pred CCccceeecccCCCCccccccccC-----CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcc
Q 040826 216 MEESKVFTDVRGTIGYMDPEYMTN-----AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIK 290 (347)
Q Consensus 216 ~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (347)
.. ........||+.|||||++.- ..|+..+|+||||++..||.-|.+|+....+... .-.+...
T Consensus 175 sT-~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmra-----LF~IpRN----- 243 (953)
T KOG0587|consen 175 ST-VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRA-----LFLIPRN----- 243 (953)
T ss_pred cc-cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhh-----hccCCCC-----
Confidence 32 333455689999999999853 3577899999999999999999999875443311 1111111
Q ss_pred cccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 291 DFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 291 ~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
|....--+.....++.+++..||.+|-.+||++.+++++
T Consensus 244 ----PPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 244 ----PPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred ----CCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 111112244677899999999999999999999998753
No 388
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=5e-33 Score=257.92 Aligned_cols=256 Identities=21% Similarity=0.205 Sum_probs=175.0
Q ss_pred hcCcccCCeeeecCCeeEEEEEe-----------------CCCCEEEEEEcccCCC----------------hhHHHHHH
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVL-----------------PSGQVVAIKHIYKSNN----------------TDSFSREV 111 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~-----------------~~~~~vavK~~~~~~~----------------~~~~~~e~ 111 (347)
.++|...++||+|+||.||+|.. .+++.||||++..... .+....|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 56788899999999999999963 2356799999864321 11233466
Q ss_pred HHhhcCCCCc-----ceeeeeEEEe--------CCeEEEEEeecCCCChHHHhhcCC-----------------------
Q 040826 112 EGLSRVRHPN-----LVCLFGCCVE--------GGEQYLVYEFCAAGNLAQHLLRKD----------------------- 155 (347)
Q Consensus 112 ~~l~~l~h~n-----iv~~~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~----------------------- 155 (347)
..+.+++|.+ ++++++++.. .+..++||||+++++|.+++....
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 6667776554 3667776643 356899999999999999885321
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeecccCCCCccccc
Q 040826 156 SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPE 235 (347)
Q Consensus 156 ~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE 235 (347)
..+++..+..++.|++.+|.||| +.+++||||||+||+++.++.++|+|||++...............+++.|+|||
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH---~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE 380 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLH---RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPE 380 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChh
Confidence 12456778899999999999999 789999999999999999999999999998764322111111223478999999
Q ss_pred cccCCc--------------------cC--CcccHHHHHHHHHHHHhCCC-CcCCChhhhhHHHH------HHhhhcCCC
Q 040826 236 YMTNAK--------------------LT--CASDIYSFGIVALQLLSGQK-VIELDFDARDQLTR------KARDVSMGK 286 (347)
Q Consensus 236 ~~~~~~--------------------~~--~~~Dv~slG~il~~lltg~~-p~~~~~~~~~~~~~------~~~~~~~~~ 286 (347)
.+.... +. .+.|+||+||++++|+++.. |+............ .++......
T Consensus 381 ~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~ 460 (507)
T PLN03224 381 ELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQK 460 (507)
T ss_pred hhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccC
Confidence 875322 11 24799999999999999875 55321111111111 111111111
Q ss_pred CCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCC---CCCCCHHHHHHH
Q 040826 287 RPIKDFEDPRLNGNINRADFESILKIAVLCVAKSS---KGRPTIDVVYEE 333 (347)
Q Consensus 287 ~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p---~~Rps~~ei~~~ 333 (347)
..+ .......+...+|+.++|..+| .+|+|+.|++++
T Consensus 461 ~~~----------~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 461 YDF----------SLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred CCc----------ccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 100 0111223578888888998765 689999999863
No 389
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-35 Score=258.69 Aligned_cols=239 Identities=22% Similarity=0.231 Sum_probs=197.6
Q ss_pred CcccCCeeeecCCeeEEEEEeCCCC-EEEEEEcccC-----CChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEe
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLPSGQ-VVAIKHIYKS-----NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYE 140 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~~~~-~vavK~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 140 (347)
+......||-||||.|-++..++.. .+|+|.+++. ...+....|-.+|..++.|.|+++|-.|.++...|++||
T Consensus 421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmE 500 (732)
T KOG0614|consen 421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLME 500 (732)
T ss_pred hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHH
Confidence 3344456999999999999976544 3788888664 234567789999999999999999999999999999999
Q ss_pred ecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccc
Q 040826 141 FCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESK 220 (347)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 220 (347)
-|-||.|+..+...+ .+......-++..+.+|+.||| ++||++|||||+|.+++.+|-+||.|||.++... ...
T Consensus 501 aClGGElWTiLrdRg-~Fdd~tarF~~acv~EAfeYLH---~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~--~g~ 574 (732)
T KOG0614|consen 501 ACLGGELWTILRDRG-SFDDYTARFYVACVLEAFEYLH---RKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIG--SGR 574 (732)
T ss_pred hhcCchhhhhhhhcC-CcccchhhhhHHHHHHHHHHHH---hcCceeccCChhheeeccCCceEEeehhhHHHhc--cCC
Confidence 999999999886544 5888889999999999999999 8999999999999999999999999999999875 344
Q ss_pred eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCC
Q 040826 221 VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGN 300 (347)
Q Consensus 221 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 300 (347)
.+..++||+.|.|||++.+...+.++|.||||+++|||++|++||....+. ..+..+.+.+..- .
T Consensus 575 KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpm-ktYn~ILkGid~i--------------~ 639 (732)
T KOG0614|consen 575 KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPM-KTYNLILKGIDKI--------------E 639 (732)
T ss_pred ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchH-HHHHHHHhhhhhh--------------h
Confidence 456789999999999999999999999999999999999999999854332 2333333333211 2
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCC
Q 040826 301 INRADFESILKIAVLCVAKSSKGRPT 326 (347)
Q Consensus 301 ~~~~~~~~l~~l~~~cl~~~p~~Rps 326 (347)
+++.......+|+.+.+..+|.+|..
T Consensus 640 ~Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 640 FPRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred cccccchhHHHHHHHHHhcCcHhhhc
Confidence 23344467888899999999999976
No 390
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-34 Score=268.56 Aligned_cols=242 Identities=28% Similarity=0.410 Sum_probs=188.0
Q ss_pred ccCCeeeecCCee-EEEEEeCCCCEEEEEEcccCCChhHHHHHHHHhhcC-CCCcceeeeeEEEeCCeEEEEEeecCCCC
Q 040826 69 WDRRFLGRGSAGL-VYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRV-RHPNLVCLFGCCVEGGEQYLVYEFCAAGN 146 (347)
Q Consensus 69 ~~~~~lg~G~~g~-V~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~gs 146 (347)
...+.+|.|+.|+ ||+|.+ +|+.||||++.... .+...+|+..|+.- .||||+++++.-.+.+..|++.|.|.. +
T Consensus 512 ~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~-~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~-s 588 (903)
T KOG1027|consen 512 SPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEEF-FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCAC-S 588 (903)
T ss_pred ccHHHcccCCCCcEEEEEee-CCceehHHHHhhHh-HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhh-h
Confidence 3445689999887 699999 68899999886543 23456899999888 599999999999999999999999988 9
Q ss_pred hHHHhhcCC---CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecC---C--CceEEeecccceecCCCc
Q 040826 147 LAQHLLRKD---SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTE---K--LEPKLSDFGLAKMLGMEE 218 (347)
Q Consensus 147 L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~---~--~~~kl~dfg~~~~~~~~~ 218 (347)
|.+++.... ........+..+.|++.||++|| +.+|+||||||.||||+. + ..++|+|||+++.+....
T Consensus 589 L~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLH---sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~ 665 (903)
T KOG1027|consen 589 LQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLH---SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGK 665 (903)
T ss_pred HHHHHhccccchhhcccccHHHHHHHHHHHHHHHH---hcccccccCCCceEEEEccCCCcceeEEecccccccccCCCc
Confidence 999997631 11222445778899999999999 789999999999999986 3 468999999999876433
Q ss_pred c--ceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhC-CCCcCCChhhhhHHHHHHhhhcCCCCCcccccCC
Q 040826 219 S--KVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSG-QKVIELDFDARDQLTRKARDVSMGKRPIKDFEDP 295 (347)
Q Consensus 219 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (347)
. ....+..||.+|+|||.+....-+.++|+||+||++|+.++| .+||......+ ..+..+......+..
T Consensus 666 sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~-------~NIl~~~~~L~~L~~- 737 (903)
T KOG1027|consen 666 SSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ-------ANILTGNYTLVHLEP- 737 (903)
T ss_pred chhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhh-------hhhhcCccceeeecc-
Confidence 2 224567899999999999988888899999999999999997 78887443221 112222222111111
Q ss_pred CCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 296 RLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 296 ~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
..++ +..+|+.+|++++|..||++.+|+.
T Consensus 738 ------~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 738 ------LPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred ------CchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 1111 7899999999999999999999974
No 391
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.3e-33 Score=251.80 Aligned_cols=233 Identities=23% Similarity=0.338 Sum_probs=188.3
Q ss_pred cccCCeeeecCCeeEEEEE-eCCCCEEEEEEcccCC-----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 68 DWDRRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSN-----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
|...+.||-|+||.|.++. .++...+|+|.+.+.. .......|-++|..-..+=||+++-.|.+.+.+|+||+|
T Consensus 631 Fvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdY 710 (1034)
T KOG0608|consen 631 FVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDY 710 (1034)
T ss_pred eEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEec
Confidence 4455779999999999998 5567789999997643 234567888999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCC----
Q 040826 142 CAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME---- 217 (347)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~---- 217 (347)
++||++-.+|.+.+ .|.+..++-+++.+..|+++.| ..|+|||||||+|||||.+|.+||+|||+++-+...
T Consensus 711 IPGGDmMSLLIrmg-IFeE~LARFYIAEltcAiesVH---kmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdsk 786 (1034)
T KOG0608|consen 711 IPGGDMMSLLIRMG-IFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 786 (1034)
T ss_pred cCCccHHHHHHHhc-cCHHHHHHHHHHHHHHHHHHHH---hccceecccCccceEEccCCceeeeeccccccceeccccc
Confidence 99999999887654 4888889999999999999999 889999999999999999999999999998643110
Q ss_pred ----------cc-----------ce----------------eecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh
Q 040826 218 ----------ES-----------KV----------------FTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS 260 (347)
Q Consensus 218 ----------~~-----------~~----------------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt 260 (347)
++ .. ....+||..|+|||++....|+..+|+||.|++||||+.
T Consensus 787 YYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~ 866 (1034)
T KOG0608|consen 787 YYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLV 866 (1034)
T ss_pred cccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhh
Confidence 00 00 012368999999999999999999999999999999999
Q ss_pred CCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHH
Q 040826 261 GQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIA 313 (347)
Q Consensus 261 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~ 313 (347)
|+.||..+.+...++... ....+++--..+..++++..-+.+|+
T Consensus 867 g~~pf~~~tp~~tq~kv~---------nw~~~l~~~~~~~ls~e~~~li~kLc 910 (1034)
T KOG0608|consen 867 GQPPFLADTPGETQYKVI---------NWRNFLHIPYQGNLSKEALDLIQKLC 910 (1034)
T ss_pred CCCCccCCCCCcceeeee---------ehhhccccccccccCHHHHHHHHHHh
Confidence 999998765554432211 13344555556677777777777765
No 392
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-33 Score=235.16 Aligned_cols=242 Identities=24% Similarity=0.350 Sum_probs=192.0
Q ss_pred hcCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccCC-----ChhHHHHHHHHhhcC-CCCcceeeeeEEEeCCeEEE
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKSN-----NTDSFSREVEGLSRV-RHPNLVCLFGCCVEGGEQYL 137 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 137 (347)
.++|+..+.||+|+|+.|-.+.+ ++.+.+|+|++++.- +.+-...|-.+.... +||.+|.+..++.++..+++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 45688889999999999999994 578899999887641 222244566666555 69999999999999999999
Q ss_pred EEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCC
Q 040826 138 VYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217 (347)
Q Consensus 138 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 217 (347)
|.||.+||+|--++++ ...++++.++-+...|+.||.||| ++||++||||.+|+|++..|.+|++|+|+++... .
T Consensus 329 vieyv~ggdlmfhmqr-qrklpeeharfys~ei~lal~flh---~rgiiyrdlkldnvlldaeghikltdygmcke~l-~ 403 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEICLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL-G 403 (593)
T ss_pred EEEEecCcceeeehhh-hhcCcHHHhhhhhHHHHHHHHHHh---hcCeeeeeccccceEEccCCceeecccchhhcCC-C
Confidence 9999999999776654 445999999999999999999999 8999999999999999999999999999998743 3
Q ss_pred ccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCC------hhhhhHHHHHHhhhcCCCCCccc
Q 040826 218 ESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELD------FDARDQLTRKARDVSMGKRPIKD 291 (347)
Q Consensus 218 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 291 (347)
+...++..+||+.|.|||.+.+..|...+|+|+||++++||+.|+.||..- ...++.+..+.-+ ..
T Consensus 404 ~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvile---kq----- 475 (593)
T KOG0695|consen 404 PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILE---KQ----- 475 (593)
T ss_pred CCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhh---hc-----
Confidence 445567789999999999999999999999999999999999999999742 1122222222211 11
Q ss_pred ccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCC
Q 040826 292 FEDPRLNGNINRADFESILKIAVLCVAKSSKGRPT 326 (347)
Q Consensus 292 ~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps 326 (347)
+ .+++........+++.-|.+||.+|..
T Consensus 476 i-------riprslsvkas~vlkgflnkdp~erlg 503 (593)
T KOG0695|consen 476 I-------RIPRSLSVKASHVLKGFLNKDPKERLG 503 (593)
T ss_pred c-------cccceeehhhHHHHHHhhcCCcHHhcC
Confidence 0 122223344566777789999999854
No 393
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=100.00 E-value=1.6e-31 Score=223.70 Aligned_cols=208 Identities=35% Similarity=0.578 Sum_probs=183.6
Q ss_pred eeecCCeeEEEEEeC-CCCEEEEEEcccCCC---hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCCCChHH
Q 040826 74 LGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN---TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQ 149 (347)
Q Consensus 74 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~ 149 (347)
||+|++|.||++... +|+.+++|.+..... ...+.+|++.++.+.|++++++++++......++++|++++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 689999999999975 489999999987665 3789999999999999999999999999899999999999899999
Q ss_pred HhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecC-CCceEEeecccceecCCCccceeecccCC
Q 040826 150 HLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTE-KLEPKLSDFGLAKMLGMEESKVFTDVRGT 228 (347)
Q Consensus 150 ~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 228 (347)
++......+++..+..++.++++++.+|| +.+++|+||+|.||+++. ++.++++|||.+........ ......+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~ 156 (215)
T cd00180 81 LLKENEGKLSEDEILRILLQILEGLEYLH---SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-LLKTIVGT 156 (215)
T ss_pred HHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-hhhcccCC
Confidence 98765456899999999999999999999 789999999999999999 89999999999987543221 22334578
Q ss_pred CCccccccccCC-ccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHH
Q 040826 229 IGYMDPEYMTNA-KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFE 307 (347)
Q Consensus 229 ~~y~aPE~~~~~-~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 307 (347)
..|++||..... .++.++|+|++|++++++ .
T Consensus 157 ~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------------~ 188 (215)
T cd00180 157 PAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------------P 188 (215)
T ss_pred CCccChhHhcccCCCCchhhhHHHHHHHHHH------------------------------------------------H
Confidence 899999999877 788999999999999999 3
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 308 SILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 308 ~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
.+.+++.+|++.+|.+||++.++++.
T Consensus 189 ~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 189 ELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred HHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 58899999999999999999999875
No 394
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-34 Score=236.08 Aligned_cols=258 Identities=24% Similarity=0.295 Sum_probs=192.6
Q ss_pred cccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC----ChhHHHHHHHHhhcCCCCcceeeeeEEEeC-----CeEEE
Q 040826 68 DWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLVCLFGCCVEG-----GEQYL 137 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~l 137 (347)
....+.||.|+||.||.++.+ +|+.|++|++..-- ....+.+|+.+|...+|.|++..++..... .+.|+
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 345678999999999999965 79999999886432 234677899999999999999988876543 25678
Q ss_pred EEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCC
Q 040826 138 VYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME 217 (347)
Q Consensus 138 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 217 (347)
++|.+.. +|.+.+. ..+.++...+.-++.||++||.||| +.+|.||||||.|.|++.|..+||||||+++....+
T Consensus 135 ~TELmQS-DLHKIIV-SPQ~Ls~DHvKVFlYQILRGLKYLH---sA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d 209 (449)
T KOG0664|consen 135 LTELMQS-DLHKIIV-SPQALTPDHVKVFVYQILRGLKYLH---TANILHRDIKPGNLLVNSNCILKICDFGLARTWDQR 209 (449)
T ss_pred HHHHHHh-hhhheec-cCCCCCcchhhhhHHHHHhhhHHHh---hcchhhccCCCccEEeccCceEEecccccccccchh
Confidence 8888876 7777553 4566888899999999999999999 899999999999999999999999999999987766
Q ss_pred ccceeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhh---------------
Q 040826 218 ESKVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARD--------------- 281 (347)
Q Consensus 218 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~--------------- 281 (347)
....++..+.|-.|.|||.+.| ..|+.+.||||+||++.||+..+-.|....+ .+++..+..-
T Consensus 210 ~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~P-iqQL~lItdLLGTPs~EaMr~ACEG 288 (449)
T KOG0664|consen 210 DRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGP-IEQLQMIIDLLGTPSQEAMKYACEG 288 (449)
T ss_pred hhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccCh-HHHHHHHHHHhCCCcHHHHHHHhhh
Confidence 6666777788999999999987 5799999999999999999988877753221 1111111111
Q ss_pred ----hcCCCCCcccccCCCCCCCCC-HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 282 ----VSMGKRPIKDFEDPRLNGNIN-RADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 282 ----~~~~~~~~~~~~~~~l~~~~~-~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
+..+....++ -+.+....+ .....+-..+.+.++.+||++|.+.++.+..
T Consensus 289 Ak~H~LR~~~k~Ps--~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~ 343 (449)
T KOG0664|consen 289 AKNHVLRAGLRAPD--TQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQH 343 (449)
T ss_pred hHHHhhccCCCCCC--ccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccc
Confidence 1111111111 011111111 1122456677778999999999998887654
No 395
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=5.7e-33 Score=221.87 Aligned_cols=258 Identities=20% Similarity=0.274 Sum_probs=203.7
Q ss_pred hcCcccCCeeeecCCeeEEEEE-eCCCCEEEEEEcccCCChhHHHHHHHHhhcCC-CCcceeeeeEEEe--CCeEEEEEe
Q 040826 65 INNDWDRRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTDSFSREVEGLSRVR-HPNLVCLFGCCVE--GGEQYLVYE 140 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~--~~~~~lv~e 140 (347)
.++|...+++|+|-++.||.|. ..+++.+++|.+.+ .....+.+|+.+|..+. ||||+++++...+ .....|++|
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP-VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE 115 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP-VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFE 115 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeech-HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhh
Confidence 4667788899999999999999 55788999998854 34556889999999997 9999999999876 346789999
Q ss_pred ecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecC-CCceEEeecccceecCCCcc
Q 040826 141 FCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTE-KLEPKLSDFGLAKMLGMEES 219 (347)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~-~~~~kl~dfg~~~~~~~~~~ 219 (347)
|.++.+...+. +.++...++..+.+++.||.|+| +.||.|||+||.|++||. ...++|+|+|++..+.+ .
T Consensus 116 ~v~n~Dfk~ly----~tl~d~dIryY~~elLkALdyCH---S~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp--~ 186 (338)
T KOG0668|consen 116 YVNNTDFKQLY----PTLTDYDIRYYIYELLKALDYCH---SMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP--G 186 (338)
T ss_pred hhccccHHHHh----hhhchhhHHHHHHHHHHHHhHHH---hcCcccccCCcceeeechhhceeeeeecchHhhcCC--C
Confidence 99986665544 34788889999999999999999 899999999999999995 55799999999999864 3
Q ss_pred ceeecccCCCCccccccccC-CccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCC-----CCccccc
Q 040826 220 KVFTDVRGTIGYMDPEYMTN-AKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGK-----RPIKDFE 293 (347)
Q Consensus 220 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 293 (347)
...+..+.+..|.-||.+.. ..|+..-|+|||||++..|+..+.||..+.+..+++..+++.....+ ..+.-.+
T Consensus 187 ~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~L 266 (338)
T KOG0668|consen 187 KEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDL 266 (338)
T ss_pred ceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCC
Confidence 44455567778899998875 46788999999999999999999999988888888877776543221 1111223
Q ss_pred CCCCCCCC---------------CH-HHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 294 DPRLNGNI---------------NR-ADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 294 ~~~l~~~~---------------~~-~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
+|.+.+.. .. -..++..+|+...|..|-.+|||+.|...
T Consensus 267 dp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 267 DPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred ChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 33322210 00 11267889999999999999999999865
No 396
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.2e-31 Score=232.54 Aligned_cols=260 Identities=24% Similarity=0.305 Sum_probs=191.7
Q ss_pred cCcccCCeeeecCCeeEEEEE-eCCCCEEEEEEcccCCC-hhHHHHHHHHhhcCC-----C---CcceeeeeEEEe----
Q 040826 66 NNDWDRRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNN-TDSFSREVEGLSRVR-----H---PNLVCLFGCCVE---- 131 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~-----h---~niv~~~~~~~~---- 131 (347)
.+|...++||.|.|++||+|. ..+.+.||+|+.+.... .+....|+.+|++++ | .+||++++.|..
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpN 157 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPN 157 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCC
Confidence 568888999999999999999 45678999999987655 456788999999884 2 369999998864
Q ss_pred CCeEEEEEeecCCCChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCC----------
Q 040826 132 GGEQYLVYEFCAAGNLAQHLLRK-DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEK---------- 200 (347)
Q Consensus 132 ~~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~---------- 200 (347)
+.++|+|+|+. |.+|..++... -.-++...+.+|++|++.||.|||..| ||+|.||||+|||+..+
T Consensus 158 G~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~~~e~~~~~~~~~ 234 (590)
T KOG1290|consen 158 GQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLCSTEIDPAKDARE 234 (590)
T ss_pred CcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeeeccccchhhhhhh
Confidence 56899999998 44899988654 345899999999999999999999855 99999999999999100
Q ss_pred --------------------------------------------------------------------------------
Q 040826 201 -------------------------------------------------------------------------------- 200 (347)
Q Consensus 201 -------------------------------------------------------------------------------- 200 (347)
T Consensus 235 a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~~n~~~~ 314 (590)
T KOG1290|consen 235 AGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPRINGNES 314 (590)
T ss_pred hccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccCCCcccc
Confidence
Q ss_pred ----------------------------------------------------------------------------CceE
Q 040826 201 ----------------------------------------------------------------------------LEPK 204 (347)
Q Consensus 201 ----------------------------------------------------------------------------~~~k 204 (347)
-++|
T Consensus 315 ~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~~di~vK 394 (590)
T KOG1290|consen 315 TVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPECDIRVK 394 (590)
T ss_pred chhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCccceeEE
Confidence 0133
Q ss_pred EeecccceecCCCccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCCh-----hhhhHHHHHH
Q 040826 205 LSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDF-----DARDQLTRKA 279 (347)
Q Consensus 205 l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~-----~~~~~~~~~~ 279 (347)
|+|||-|..+. ..++.-..|..|.|||++.+..|+..+||||++|++|||+||-..|.+.. .+++.+..+.
T Consensus 395 IaDlGNACW~~----khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i~ 470 (590)
T KOG1290|consen 395 IADLGNACWVH----KHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALIM 470 (590)
T ss_pred Eeeccchhhhh----hhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHHH
Confidence 34444333321 11222235778999999999999999999999999999999999887532 1233333333
Q ss_pred hhhc-------CCCCCcccccCCC-------------C------CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 280 RDVS-------MGKRPIKDFEDPR-------------L------NGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 280 ~~~~-------~~~~~~~~~~~~~-------------l------~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
.-.. .+...-.+|++.. | .-.++.+...++.+++.-||+.+|++|||+.+.++
T Consensus 471 ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~ 549 (590)
T KOG1290|consen 471 ELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLK 549 (590)
T ss_pred HHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhc
Confidence 2211 1111112222211 0 11446678889999999999999999999999875
No 397
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.97 E-value=2.8e-32 Score=243.50 Aligned_cols=195 Identities=26% Similarity=0.327 Sum_probs=169.2
Q ss_pred hcCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC----------hhHHHHHHHHhhcCC---CCcceeeeeEEE
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN----------TDSFSREVEGLSRVR---HPNLVCLFGCCV 130 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----------~~~~~~e~~~l~~l~---h~niv~~~~~~~ 130 (347)
...|...+++|.|+||.|++|.++ +...|++|.+.+.+- -.....|+++|..++ |+||++++++|+
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 345778899999999999999976 456899999977531 124667999999997 999999999999
Q ss_pred eCCeEEEEEeec-CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecc
Q 040826 131 EGGEQYLVYEFC-AAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFG 209 (347)
Q Consensus 131 ~~~~~~lv~e~~-~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg 209 (347)
+++.+|++||-. ++.+|.+++..+. .+++.++..|++|++.|+++|| +.||+|||||-+|+.++.+|-+||+|||
T Consensus 640 ddd~yyl~te~hg~gIDLFd~IE~kp-~m~E~eAk~IFkQV~agi~hlh---~~~ivhrdikdenvivd~~g~~klidfg 715 (772)
T KOG1152|consen 640 DDDYYYLETEVHGEGIDLFDFIEFKP-RMDEPEAKLIFKQVVAGIKHLH---DQGIVHRDIKDENVIVDSNGFVKLIDFG 715 (772)
T ss_pred cCCeeEEEecCCCCCcchhhhhhccC-ccchHHHHHHHHHHHhcccccc---ccCceecccccccEEEecCCeEEEeecc
Confidence 999999999986 4558999886544 4899999999999999999999 8999999999999999999999999999
Q ss_pred cceecCCCccceeecccCCCCccccccccCCccC-CcccHHHHHHHHHHHHhCCCCcC
Q 040826 210 LAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLT-CASDIYSFGIVALQLLSGQKVIE 266 (347)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~il~~lltg~~p~~ 266 (347)
.+.... +..+...+||..|.|||++.|.+|- ..-|||++|++||-++....|++
T Consensus 716 saa~~k---sgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 716 SAAYTK---SGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred chhhhc---CCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 998754 3445567899999999999998764 67899999999999999998875
No 398
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.97 E-value=1.8e-31 Score=222.93 Aligned_cols=258 Identities=24% Similarity=0.296 Sum_probs=194.9
Q ss_pred cCcccCCeeeecCCeeEEEEE-eCCCCEEEEEEcccCC----ChhHHHHHHHHhhcCCCCcceeeeeEEEeCC------e
Q 040826 66 NNDWDRRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSN----NTDSFSREVEGLSRVRHPNLVCLFGCCVEGG------E 134 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~ 134 (347)
.+|...+.+|.|.- .|..+. .-.++.|++|+...+. ......+|+..+..++|+|+++++.++.-.. .
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 46667788898887 555555 3368999999886542 2345778999999999999999999987543 5
Q ss_pred EEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceec
Q 040826 135 QYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKML 214 (347)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~ 214 (347)
.|+|||+|.. +|...+.. .+.-..+..++.|++.|+.||| +.||+||||||+||++..++.+||.|||+++.-
T Consensus 96 ~y~v~e~m~~-nl~~vi~~---elDH~tis~i~yq~~~~ik~lh---s~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e 168 (369)
T KOG0665|consen 96 VYLVMELMDA-NLCQVILM---ELDHETISYILYQMLCGIKHLH---SAGIIHRDLKPSNIVVNSDCTLKILDFGLARTE 168 (369)
T ss_pred HHHHHHhhhh-HHHHHHHH---hcchHHHHHHHHHHHHHHHHHH---hcceeecccCcccceecchhheeeccchhhccc
Confidence 7999999987 99888752 3566788899999999999999 899999999999999999999999999999875
Q ss_pred CCCccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCCh-----------------hhhhHHHH
Q 040826 215 GMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDF-----------------DARDQLTR 277 (347)
Q Consensus 215 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~-----------------~~~~~~~~ 277 (347)
... ..++..+.+..|.|||++.+..+...+||||+||++.||++|...|.+.. ...+++..
T Consensus 169 ~~~--~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~ 246 (369)
T KOG0665|consen 169 DTD--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQP 246 (369)
T ss_pred Ccc--cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhH
Confidence 322 45677889999999999999889999999999999999999998776321 01122222
Q ss_pred HHhhhcCCCCCccc------ccCCCCCC--CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 278 KARDVSMGKRPIKD------FEDPRLNG--NINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 278 ~~~~~~~~~~~~~~------~~~~~l~~--~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
..+......+.... +-|..... +.++.......+|+.+||-.||++|-|+++++++
T Consensus 247 ~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 247 TVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred HHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 22222222111111 11111111 1123344678889999999999999999998863
No 399
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.97 E-value=6.7e-30 Score=216.63 Aligned_cols=197 Identities=36% Similarity=0.516 Sum_probs=170.1
Q ss_pred cccCCeeeecCCeeEEEEEeCC-CCEEEEEEcccCC---ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecC
Q 040826 68 DWDRRFLGRGSAGLVYKGVLPS-GQVVAIKHIYKSN---NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCA 143 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 143 (347)
|...+.||.|++|.||++...+ ++.+++|.+.... ....+.+|++.+++++|+|++++++++......++++|+++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 3456789999999999999764 8899999997654 35678899999999999999999999998899999999999
Q ss_pred CCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceee
Q 040826 144 AGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFT 223 (347)
Q Consensus 144 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 223 (347)
+++|.+++......+++.....++.+++.++.+|| +.+++|+|++|+||+++.++.++|+|||.+............
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~ 157 (225)
T smart00221 81 GGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLH---SLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLK 157 (225)
T ss_pred CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccccccc
Confidence 99999998654433789999999999999999999 779999999999999999999999999998876533211223
Q ss_pred cccCCCCccccccc-cCCccCCcccHHHHHHHHHHHHhCCCCcCC
Q 040826 224 DVRGTIGYMDPEYM-TNAKLTCASDIYSFGIVALQLLSGQKVIEL 267 (347)
Q Consensus 224 ~~~~~~~y~aPE~~-~~~~~~~~~Dv~slG~il~~lltg~~p~~~ 267 (347)
...++..|++||.. ....++.++|+|+||+++++|++|+.||..
T Consensus 158 ~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 158 TVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 34578889999998 667788899999999999999999999964
No 400
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.97 E-value=6.6e-32 Score=244.72 Aligned_cols=251 Identities=26% Similarity=0.354 Sum_probs=199.8
Q ss_pred hcCcccCCeeeecCCeeEEEEEe-CCCCEEEEEEccc--CCChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYK--SNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
.++|...+.+|.|.+|.||+++. .+++..|+|.+.- ..+.....+|+-+++..+||||+.++|.+......+++|||
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy 93 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY 93 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence 34666778899999999999994 4789999998864 34556678899999999999999999999999999999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccce
Q 040826 142 CAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKV 221 (347)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 221 (347)
|.+|+|.+..+.. +++++.++...++...+|+.||| +.|-+|||||-.||++++.|.+|++|||.+..+.. ....
T Consensus 94 cgggslQdiy~~T-gplselqiayvcRetl~gl~ylh---s~gk~hRdiKGanilltd~gDvklaDfgvsaqita-ti~K 168 (829)
T KOG0576|consen 94 CGGGSLQDIYHVT-GPLSELQIAYVCRETLQGLKYLH---SQGKIHRDIKGANILLTDEGDVKLADFGVSAQITA-TIAK 168 (829)
T ss_pred cCCCcccceeeec-ccchhHHHHHHHhhhhccchhhh---cCCcccccccccceeecccCceeecccCchhhhhh-hhhh
Confidence 9999999966544 56999999999999999999999 88999999999999999999999999999887642 2334
Q ss_pred eecccCCCCcccccccc---CCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCC
Q 040826 222 FTDVRGTIGYMDPEYMT---NAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLN 298 (347)
Q Consensus 222 ~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 298 (347)
.....||+.|||||+.. ...|...+|+|++|++..|+-..++|...-.+... +...-+ .... .|.+.
T Consensus 169 rksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~-l~LmTk----S~~q-----pp~lk 238 (829)
T KOG0576|consen 169 RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRA-LFLMTK----SGFQ-----PPTLK 238 (829)
T ss_pred hhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHH-HHHhhc----cCCC-----CCccc
Confidence 56678999999999774 56789999999999999999887776543222211 111111 1111 11111
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 299 GNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 299 ~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
+ .....+.+.++++.|+.++|.+|||++..+.
T Consensus 239 D--k~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 239 D--KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred C--CccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 1 1133467999999999999999999987764
No 401
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.8e-30 Score=209.99 Aligned_cols=260 Identities=19% Similarity=0.250 Sum_probs=196.6
Q ss_pred hcCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCC-ChhHHHHHHHHhhcC-CCCcceeeeeE-EEeCCeEEEEEe
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSN-NTDSFSREVEGLSRV-RHPNLVCLFGC-CVEGGEQYLVYE 140 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~e~~~l~~l-~h~niv~~~~~-~~~~~~~~lv~e 140 (347)
.+.|...+.+|+|.||.+-++... +.+.+++|-+..+- ...+|.+|...--.| .|.||+..+++ +++.+.+.+++|
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE 102 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE 102 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence 456777788999999999999954 67889999887654 456899998766566 48899988865 566778889999
Q ss_pred ecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEec--CCCceEEeecccceecCCCc
Q 040826 141 FCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLT--EKLEPKLSDFGLAKMLGMEE 218 (347)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~--~~~~~kl~dfg~~~~~~~~~ 218 (347)
|++.|+|...+.. ..+.+....+++.|++.|+.|+| +++++|||||.+||||- +.-.+||||||+.+..+
T Consensus 103 ~aP~gdL~snv~~--~GigE~~~K~v~~ql~SAi~fMH---sknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g--- 174 (378)
T KOG1345|consen 103 FAPRGDLRSNVEA--AGIGEANTKKVFAQLLSAIEFMH---SKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVG--- 174 (378)
T ss_pred cCccchhhhhcCc--ccccHHHHHHHHHHHHHHHHHhh---ccchhhcccccceEEEecCCccEEEeeecccccccC---
Confidence 9999999988744 34778888899999999999999 89999999999999985 34479999999988643
Q ss_pred cceeecccCCCCccccccccC---C--ccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCccccc
Q 040826 219 SKVFTDVRGTIGYMDPEYMTN---A--KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFE 293 (347)
Q Consensus 219 ~~~~~~~~~~~~y~aPE~~~~---~--~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (347)
........+..|.+||.... + ...+.+|+|+||+++|..+||..|++........+..+.+-........+..+
T Consensus 175 -~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F 253 (378)
T KOG1345|consen 175 -TTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKF 253 (378)
T ss_pred -ceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhh
Confidence 22233345678999997642 2 35678999999999999999999998554444444444433222122222222
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhh
Q 040826 294 DPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWKNTM 342 (347)
Q Consensus 294 ~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~~~~ 342 (347)
. .++ +.+.++..+-+.++|++|--..++.+.-.+...+..
T Consensus 254 ~-----~fs----~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E~~ 293 (378)
T KOG1345|consen 254 N-----PFS----EKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKEKL 293 (378)
T ss_pred c-----ccC----HHHHHHHHHhcCCcccccchhHHHHHHHHHHHHHhh
Confidence 2 222 467888888999999999888888887777766654
No 402
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.96 E-value=5.2e-31 Score=232.80 Aligned_cols=197 Identities=25% Similarity=0.243 Sum_probs=166.8
Q ss_pred HhcCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC-hhHHHHHHHHhhcCCC------CcceeeeeEEEeCCeE
Q 040826 64 AINNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN-TDSFSREVEGLSRVRH------PNLVCLFGCCVEGGEQ 135 (347)
Q Consensus 64 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~h------~niv~~~~~~~~~~~~ 135 (347)
+-.+|......|+|.|++|..|... -|+.||||++..... ...-..|+++|++|+. -|+++++-.|...+++
T Consensus 430 LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHL 509 (752)
T KOG0670|consen 430 LDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHL 509 (752)
T ss_pred hcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhccee
Confidence 4567888888999999999999954 578999999977643 4566789999999952 3799999999999999
Q ss_pred EEEEeecCCCChHHHhhcCC--CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCC-ceEEeecccce
Q 040826 136 YLVYEFCAAGNLAQHLLRKD--SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKL-EPKLSDFGLAK 212 (347)
Q Consensus 136 ~lv~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~-~~kl~dfg~~~ 212 (347)
|||||...- +|.+.+..-+ --+....+..++.|++-||..|. ..|++|.||||.|||++++. .+||||||.|.
T Consensus 510 ClVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK---~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~ 585 (752)
T KOG0670|consen 510 CLVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLK---KCGVLHADIKPDNILVNESKNILKLCDFGSAS 585 (752)
T ss_pred EEEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHH---hcCeeecccCccceEeccCcceeeeccCcccc
Confidence 999999866 9999886533 34777889999999999999999 78999999999999999754 68999999998
Q ss_pred ecCCCccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCC
Q 040826 213 MLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIEL 267 (347)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~ 267 (347)
.... +..++.-.+..|.|||++.|.+|+...|+||+||+||||.||+-.|.+
T Consensus 586 ~~~e---neitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG 637 (752)
T KOG0670|consen 586 FASE---NEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPG 637 (752)
T ss_pred cccc---ccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCC
Confidence 7542 233444566789999999999999999999999999999999988864
No 403
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.96 E-value=5.7e-29 Score=203.23 Aligned_cols=172 Identities=22% Similarity=0.180 Sum_probs=133.0
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeec
Q 040826 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD 224 (347)
Q Consensus 145 gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 224 (347)
|||.+++...+..+++..++.++.|++.||.||| +.+ ||+||+++.++.+++ ||.+...... .
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~------~ 63 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELH---RQA------KSGNILLTWDGLLKL--DGSVAFKTPE------Q 63 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---hcC------CcccEeEcCccceee--ccceEeeccc------c
Confidence 6899999766667999999999999999999999 555 999999999999999 9998865322 1
Q ss_pred ccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHH
Q 040826 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRA 304 (347)
Q Consensus 225 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 304 (347)
..|+..|+|||++.+..++.++||||||+++|+|++|+.||.........+............. - ......
T Consensus 64 ~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--------~-~~~~~~ 134 (176)
T smart00750 64 SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPR--------D-RSNLES 134 (176)
T ss_pred CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCcc--------c-cccHHH
Confidence 2578999999999999999999999999999999999999875443333333333222111100 0 011112
Q ss_pred HHH--HHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhh
Q 040826 305 DFE--SILKIAVLCVAKSSKGRPTIDVVYEEIDKAWKNTM 342 (347)
Q Consensus 305 ~~~--~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~~~~ 342 (347)
..+ ++.+++.+||+.+|.+|||+.++++.+..+..+..
T Consensus 135 ~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~~~ 174 (176)
T smart00750 135 VSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAETL 174 (176)
T ss_pred HHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHHHh
Confidence 222 69999999999999999999999999988865543
No 404
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.96 E-value=2.8e-29 Score=217.20 Aligned_cols=266 Identities=26% Similarity=0.282 Sum_probs=201.8
Q ss_pred HHHHhcCcccCCeeeecCCeeEEEEEeC----CCCEEEEEEcccCCChhHHHHHHHHhhcCC-CCcceeeeeEEEeCCeE
Q 040826 61 IENAINNDWDRRFLGRGSAGLVYKGVLP----SGQVVAIKHIYKSNNTDSFSREVEGLSRVR-HPNLVCLFGCCVEGGEQ 135 (347)
Q Consensus 61 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~ 135 (347)
+....+.|...++||.|.|++||+++.. .++.||+|.+..........+|++.|..+. +.||+++.+++..++..
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v 110 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQV 110 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhhccCCee
Confidence 3445567888999999999999999843 467899999998888888999999999995 99999999999999999
Q ss_pred EEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecC-CCceEEeecccceec
Q 040826 136 YLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTE-KLEPKLSDFGLAKML 214 (347)
Q Consensus 136 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~-~~~~kl~dfg~~~~~ 214 (347)
.+|+||++..+..++... ++...+..+++.++.||.++| .+||+|||+||+|++.+. -+.-.|.|||++...
T Consensus 111 ~ivlp~~~H~~f~~l~~~----l~~~~i~~Yl~~ll~Al~~~h---~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~ 183 (418)
T KOG1167|consen 111 AIVLPYFEHDRFRDLYRS----LSLAEIRWYLRNLLKALAHLH---KNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRY 183 (418)
T ss_pred EEEecccCccCHHHHHhc----CCHHHHHHHHHHHHHHhhhhh---ccCccccCCCccccccccccCCceEEechhHHHH
Confidence 999999999888887744 668889999999999999999 999999999999999985 457899999999721
Q ss_pred CCC---------------c------------------c----------ceeecccCCCCccccccccC-CccCCcccHHH
Q 040826 215 GME---------------E------------------S----------KVFTDVRGTIGYMDPEYMTN-AKLTCASDIYS 250 (347)
Q Consensus 215 ~~~---------------~------------------~----------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~s 250 (347)
... . . ...-...||++|.|||++.. ...+.++||||
T Consensus 184 d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws 263 (418)
T KOG1167|consen 184 DGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWS 263 (418)
T ss_pred HhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceee
Confidence 000 0 0 00111358999999999875 45678999999
Q ss_pred HHHHHHHHHhCCCCcCCChhhhhHHHHHHhhh----------cCCC------CC----------cccccCCCCC------
Q 040826 251 FGIVALQLLSGQKVIELDFDARDQLTRKARDV----------SMGK------RP----------IKDFEDPRLN------ 298 (347)
Q Consensus 251 lG~il~~lltg~~p~~~~~~~~~~~~~~~~~~----------~~~~------~~----------~~~~~~~~l~------ 298 (347)
.|++++-+++++.||....++.+.+.+.+... ..+. .. ...+.-..+.
T Consensus 264 ~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n 343 (418)
T KOG1167|consen 264 AGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPN 343 (418)
T ss_pred ccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccc
Confidence 99999999999999976555444433332211 0111 00 0000000000
Q ss_pred ---CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 299 ---GNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 299 ---~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
.....-....+++|+.+|+..||.+|.|+++.+++
T Consensus 344 ~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 344 TEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred eeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 01111222488999999999999999999998863
No 405
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.96 E-value=2e-29 Score=250.54 Aligned_cols=195 Identities=15% Similarity=0.207 Sum_probs=138.0
Q ss_pred cCCC-CcceeeeeEE-------EeCCeEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCcee
Q 040826 116 RVRH-PNLVCLFGCC-------VEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVH 187 (347)
Q Consensus 116 ~l~h-~niv~~~~~~-------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H 187 (347)
.++| .||..+++.+ .....+.+++|++.+ +|.+++......+++..++.++.|+++||.||| ++||+|
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~gIvH 103 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECEDV-SLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAH---SQGIVV 103 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccCCc-cHHHHHhcccccccHHHHHHHHHHHHHHHHHHH---hCCeee
Confidence 4445 5777777766 223457788998755 999999765667999999999999999999999 899999
Q ss_pred CCCCCCCEEecCC-------------------CceEEeecccceecCCCcc---------------ceeecccCCCCccc
Q 040826 188 RDIKLTNILLTEK-------------------LEPKLSDFGLAKMLGMEES---------------KVFTDVRGTIGYMD 233 (347)
Q Consensus 188 ~dl~p~Nili~~~-------------------~~~kl~dfg~~~~~~~~~~---------------~~~~~~~~~~~y~a 233 (347)
|||||+|||++.. +.+|++|||+++....... .......||..|+|
T Consensus 104 rDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A 183 (793)
T PLN00181 104 HNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTS 183 (793)
T ss_pred ccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEC
Confidence 9999999999654 4456666666543210000 00011347888999
Q ss_pred cccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHH
Q 040826 234 PEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIA 313 (347)
Q Consensus 234 PE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~ 313 (347)
||++.+..++.++|||||||++|||++|.+|+.... ........... .+.. .........++
T Consensus 184 PE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~---~~~~~~~~~~~----------~~~~-----~~~~~~~~~~~ 245 (793)
T PLN00181 184 PEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS---RTMSSLRHRVL----------PPQI-----LLNWPKEASFC 245 (793)
T ss_pred hhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH---HHHHHHHHhhc----------Chhh-----hhcCHHHHHHH
Confidence 999999999999999999999999999887754211 11111111110 0000 01123466888
Q ss_pred HHhccCCCCCCCCHHHHHH
Q 040826 314 VLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 314 ~~cl~~~p~~Rps~~ei~~ 332 (347)
.+||+++|.+|||+.|+++
T Consensus 246 ~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 246 LWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred HHhCCCChhhCcChHHHhh
Confidence 8999999999999999975
No 406
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.93 E-value=3.6e-25 Score=186.32 Aligned_cols=262 Identities=17% Similarity=0.172 Sum_probs=208.1
Q ss_pred cCcccCCeeeecCCeeEEEEE-eCCCCEEEEEEcccCCChhHHHHHHHHhhcCC-CCcceeeeeEEEeCCeEEEEEeecC
Q 040826 66 NNDWDRRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTDSFSREVEGLSRVR-HPNLVCLFGCCVEGGEQYLVYEFCA 143 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~ 143 (347)
-.|...++||+|+||.++.|+ +-+++.||||.-...++..++..|....+.|. .++|..++-+-..+..-.||+|..
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL- 106 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL- 106 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-
Confidence 467888999999999999999 56899999998888888889999999999885 788988888877777888999988
Q ss_pred CCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCC-----CceEEeecccceecCCCc
Q 040826 144 AGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEK-----LEPKLSDFGLAKMLGMEE 218 (347)
Q Consensus 144 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~-----~~~kl~dfg~~~~~~~~~ 218 (347)
|.||.|++.-.+..|+...++.++.|++.-++++| ++.+|.|||||+|+||..- ..+.++|||++..+.+..
T Consensus 107 GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH---~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~ 183 (449)
T KOG1165|consen 107 GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVH---EKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPK 183 (449)
T ss_pred CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHH---hcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCcc
Confidence 66999998888889999999999999999999999 8899999999999999643 358999999999886433
Q ss_pred ------cceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccc
Q 040826 219 ------SKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDF 292 (347)
Q Consensus 219 ------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (347)
..+.....||.+||+-....+...+..-|.=|||.+++++|.|..|+.+-..+. ....-..+ ++.+-..-
T Consensus 184 TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~t--nK~kYeKI--Ge~Kr~T~ 259 (449)
T KOG1165|consen 184 TKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADT--NKEKYEKI--GETKRSTP 259 (449)
T ss_pred ccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcc--hHHHHHHh--ccccccCC
Confidence 334566789999999999999999999999999999999999999998532211 11111111 11111111
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 040826 293 EDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWKN 340 (347)
Q Consensus 293 ~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~~ 340 (347)
+. +.....++++...+...-..+-.+-|..+-+...+.+++..
T Consensus 260 i~-----~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr 302 (449)
T KOG1165|consen 260 IE-----VLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDR 302 (449)
T ss_pred HH-----HHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHh
Confidence 11 12223445677776656566667779999999999888764
No 407
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.93 E-value=1.5e-25 Score=199.93 Aligned_cols=162 Identities=22% Similarity=0.209 Sum_probs=125.6
Q ss_pred HhcCcccCCeeeecCCeeEEEEEeC--CCCEEEEEEcccCC-------ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCe
Q 040826 64 AINNDWDRRFLGRGSAGLVYKGVLP--SGQVVAIKHIYKSN-------NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGE 134 (347)
Q Consensus 64 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~-------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 134 (347)
..++|...+.||+|+||.||+|... +++.+|+|++.... ....+.+|++++++++|+|+++.+.. .+.
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~~ 92 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TGK 92 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cCC
Confidence 4567888999999999999999854 57788999865321 13458899999999999999853322 246
Q ss_pred EEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCC-CCCCEEecCCCceEEeeccccee
Q 040826 135 QYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDI-KLTNILLTEKLEPKLSDFGLAKM 213 (347)
Q Consensus 135 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl-~p~Nili~~~~~~kl~dfg~~~~ 213 (347)
.++||||++|++|.. .. ... ...++.|++++|.||| +.|++|||| ||+|||++.++.++|+|||+++.
T Consensus 93 ~~LVmE~~~G~~L~~-~~-~~~------~~~~~~~i~~aL~~lH---~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~ 161 (365)
T PRK09188 93 DGLVRGWTEGVPLHL-AR-PHG------DPAWFRSAHRALRDLH---RAGITHNDLAKPQNWLMGPDGEAAVIDFQLASV 161 (365)
T ss_pred cEEEEEccCCCCHHH-hC-ccc------hHHHHHHHHHHHHHHH---HCCCeeCCCCCcceEEEcCCCCEEEEECcccee
Confidence 799999999999963 21 111 1467899999999999 889999999 99999999999999999999997
Q ss_pred cCCCccc-------eeecccCCCCccccccccC
Q 040826 214 LGMEESK-------VFTDVRGTIGYMDPEYMTN 239 (347)
Q Consensus 214 ~~~~~~~-------~~~~~~~~~~y~aPE~~~~ 239 (347)
....... ......++..|+|||.+..
T Consensus 162 ~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 162 FRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred cccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 6432211 1123457888999998853
No 408
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.93 E-value=6.6e-24 Score=189.54 Aligned_cols=257 Identities=19% Similarity=0.201 Sum_probs=194.2
Q ss_pred CcccCCeeeecCCeeEEEEEeCCC--CEEEEEEcccCCCh--hHHHHHHHHhhcCCC----CcceeeeeEE-EeCCeEEE
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLPSG--QVVAIKHIYKSNNT--DSFSREVEGLSRVRH----PNLVCLFGCC-VEGGEQYL 137 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~~~--~~vavK~~~~~~~~--~~~~~e~~~l~~l~h----~niv~~~~~~-~~~~~~~l 137 (347)
+|...++||+|+||.||.+...+. ..+|+|........ ..+..|..++..+.. +++..+++.. ......++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 788889999999999999996543 47888877654322 268889998888862 5888888887 46778899
Q ss_pred EEeecCCCChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCC-----CceEEeecccc
Q 040826 138 VYEFCAAGNLAQHLLRKD-SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEK-----LEPKLSDFGLA 211 (347)
Q Consensus 138 v~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~-----~~~kl~dfg~~ 211 (347)
||+.. |.+|.++..... ..++.....+++.|++.+|.+|| +.|++||||||.|+++... ..+.+.|||++
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH---~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLH---SKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHH---hcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99987 669999875544 78999999999999999999999 8999999999999999854 46999999999
Q ss_pred e--ecCCCcc----c--e-eecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhh--hhHHHHHHh
Q 040826 212 K--MLGMEES----K--V-FTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDA--RDQLTRKAR 280 (347)
Q Consensus 212 ~--~~~~~~~----~--~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~--~~~~~~~~~ 280 (347)
+ .+..... . . .....||..|.++....+...+.+.|+||++.++.+++.|..|+...... .........
T Consensus 175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~ 254 (322)
T KOG1164|consen 175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPR 254 (322)
T ss_pred ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhh
Confidence 9 4321111 1 1 12355999999999999999999999999999999999999998643321 111111111
Q ss_pred hhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 040826 281 DVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWKNT 341 (347)
Q Consensus 281 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~~~ 341 (347)
...... ..... ..++.++...+-..+...+|....+...+++.....
T Consensus 255 ~~~~~~-----------~~~~~---~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~ 301 (322)
T KOG1164|consen 255 KLLTDR-----------FGDLK---PEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSE 301 (322)
T ss_pred hhcccc-----------ccCCC---hHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence 111110 01112 245666666566689999999999999998887654
No 409
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.93 E-value=5.7e-26 Score=186.40 Aligned_cols=243 Identities=18% Similarity=0.281 Sum_probs=185.6
Q ss_pred CCeeeecCCeeEEEEEeCCCCEEEEEEcccC----CChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCCCC
Q 040826 71 RRFLGRGSAGLVYKGVLPSGQVVAIKHIYKS----NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGN 146 (347)
Q Consensus 71 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs 146 (347)
..+|.+...|..|+|++..+. ++.|++.-. ...++|..|.-.|+-..||||++++|.|.......++..||+.|+
T Consensus 195 ~tkl~e~hsgelwrgrwqgnd-ivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gs 273 (448)
T KOG0195|consen 195 ITKLAESHSGELWRGRWQGND-IVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGS 273 (448)
T ss_pred hhhhccCCCcccccccccCcc-hhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchH
Confidence 356889999999999996544 556665432 234578889999999999999999999999999999999999999
Q ss_pred hHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEe--ecccceecCCCccceee
Q 040826 147 LAQHLLRK-DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLS--DFGLAKMLGMEESKVFT 223 (347)
Q Consensus 147 L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~--dfg~~~~~~~~~~~~~~ 223 (347)
|+..++.. +-.....++.+++.++++|++|||+. ..-+--..|++..++||++.+.+|+ |--.+. ...
T Consensus 274 lynvlhe~t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfsf--------qe~ 344 (448)
T KOG0195|consen 274 LYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFSF--------QEV 344 (448)
T ss_pred HHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceeee--------ecc
Confidence 99999754 34567788999999999999999975 3334455799999999999887764 221111 112
Q ss_pred cccCCCCccccccccCCccC---CcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCC
Q 040826 224 DVRGTIGYMDPEYMTNAKLT---CASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGN 300 (347)
Q Consensus 224 ~~~~~~~y~aPE~~~~~~~~---~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 300 (347)
+..-.+.|++||.++..+-+ .++|+|||++++|||.|...||..-.+.+-.+. ....+ ++-.
T Consensus 345 gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmk----ialeg-----------lrv~ 409 (448)
T KOG0195|consen 345 GRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMK----IALEG-----------LRVH 409 (448)
T ss_pred ccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhh----hhhcc-----------cccc
Confidence 23356789999999876533 579999999999999999999974332222211 11112 2224
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 040826 301 INRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAW 338 (347)
Q Consensus 301 ~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~ 338 (347)
+++.....+.+|+.-|+..||.+||.+..|+-.||++.
T Consensus 410 ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 410 IPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred CCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 44555678999999999999999999999999999874
No 410
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.92 E-value=3.7e-24 Score=172.80 Aligned_cols=261 Identities=19% Similarity=0.163 Sum_probs=204.2
Q ss_pred hcCcccCCeeeecCCeeEEEEE-eCCCCEEEEEEcccCCChhHHHHHHHHhhcCCC-CcceeeeeEEEeCCeEEEEEeec
Q 040826 65 INNDWDRRFLGRGSAGLVYKGV-LPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRH-PNLVCLFGCCVEGGEQYLVYEFC 142 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~~ 142 (347)
...|...++||+|+||.+|.|. ..+|+.||+|.-.+......+..|..+.+.+++ ..|..+..+..+...-.+||+..
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL 93 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL 93 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeecc
Confidence 5678899999999999999999 668999999988887777888999999999974 56777777777788889999988
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecC---CCceEEeecccceecCCCcc
Q 040826 143 AAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTE---KLEPKLSDFGLAKMLGMEES 219 (347)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~---~~~~kl~dfg~~~~~~~~~~ 219 (347)
|.||.+++.-....++....+-++-|++.-++|+| .++++||||||+|+|..- ...+.++|||++..+.+...
T Consensus 94 -GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH---~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t 169 (341)
T KOG1163|consen 94 -GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVH---LRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRT 169 (341)
T ss_pred -CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHH---hhccccccCCccceeeccccccceEEEEeccchhhhccccc
Confidence 66999988666677999999999999999999999 889999999999999863 45799999999998753222
Q ss_pred ------ceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhh-H-HHHHHhhhcCCCCCccc
Q 040826 220 ------KVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARD-Q-LTRKARDVSMGKRPIKD 291 (347)
Q Consensus 220 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~-~-~~~~~~~~~~~~~~~~~ 291 (347)
.......||.+|.+-....+...+...|+=|+|.+|.++..|..|+++-..... + ++.+...-... ++.
T Consensus 170 ~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~--~ie- 246 (341)
T KOG1163|consen 170 RQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMST--PIE- 246 (341)
T ss_pred cccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCC--CHH-
Confidence 222335689999988888888888899999999999999999999986433221 1 22221111110 000
Q ss_pred ccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 040826 292 FEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWKN 340 (347)
Q Consensus 292 ~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~~ 340 (347)
......+.+..-.+..|-..--++-|....+.+.+.-++++
T Consensus 247 --------~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~ 287 (341)
T KOG1163|consen 247 --------VLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRT 287 (341)
T ss_pred --------HHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhh
Confidence 11223346788888888888888889999888888877654
No 411
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.91 E-value=1.2e-22 Score=181.69 Aligned_cols=255 Identities=32% Similarity=0.399 Sum_probs=195.5
Q ss_pred cccCCeeeecCCeeEEEEEeCCCCEEEEEEcccCCC-----hhHHHHHHHHhhcCCCC-cceeeeeEEEeCCeEEEEEee
Q 040826 68 DWDRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNN-----TDSFSREVEGLSRVRHP-NLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~h~-niv~~~~~~~~~~~~~lv~e~ 141 (347)
|...+.||.|+|+.||++... ..+++|.+..... ...+.+|...+..+.|+ +++++.+.+......++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 445677999999999999986 7889998876533 44688999999999988 799999999777778999999
Q ss_pred cCCCChHHHhhcCC--CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCC-ceEEeecccceecCCCc
Q 040826 142 CAAGNLAQHLLRKD--SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKL-EPKLSDFGLAKMLGMEE 218 (347)
Q Consensus 142 ~~~gsL~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~-~~kl~dfg~~~~~~~~~ 218 (347)
+.++++.+++.... ..+.......++.|++.++.|+| ..+++|||+||+||+++..+ .++++|||.+.......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H---~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 99999997665443 26899999999999999999999 88899999999999999988 79999999998654322
Q ss_pred cc-----eeecccCCCCccccccccC---CccCCcccHHHHHHHHHHHHhCCCCcCCChhh--hhHHHHHHhhhcCCCCC
Q 040826 219 SK-----VFTDVRGTIGYMDPEYMTN---AKLTCASDIYSFGIVALQLLSGQKVIELDFDA--RDQLTRKARDVSMGKRP 288 (347)
Q Consensus 219 ~~-----~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~--~~~~~~~~~~~~~~~~~ 288 (347)
.. ......++..|++||.+.+ ..++...|+||+|++++++++|..|+...... .............. .
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--~ 234 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP--S 234 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc--c
Confidence 21 2355679999999999987 57888999999999999999999997654421 11222221111111 0
Q ss_pred cccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 289 IKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 289 ~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
... .............+.+++..|+..+|..|.+..+....
T Consensus 235 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 235 LAS----PLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred ccc----ccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 000 00001012223578889999999999999999887764
No 412
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.90 E-value=1.2e-24 Score=206.30 Aligned_cols=250 Identities=21% Similarity=0.258 Sum_probs=183.2
Q ss_pred cCCeeeecCCeeEEEEEe-CCCCEEEEEEcc----cCCChh----HHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEe
Q 040826 70 DRRFLGRGSAGLVYKGVL-PSGQVVAIKHIY----KSNNTD----SFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYE 140 (347)
Q Consensus 70 ~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~----~~~~~~----~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 140 (347)
....+|.|++|.|+.... ........|... +..... .+..|+.+-..++|+|++..+..+.+.....-.||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 467799999998887773 233333333322 222111 24456777788899999888877766555555599
Q ss_pred ecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcc-
Q 040826 141 FCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEES- 219 (347)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~- 219 (347)
|+++ +|..++... ..+....+..+++|+..|+.|+| ..|+.|||+|++|++++.+|.+||+|||.+........
T Consensus 402 ~~~~-Dlf~~~~~~-~~~~~~e~~c~fKqL~~Gv~y~h---~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~ 476 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSN-GKLTPLEADCFFKQLLRGVKYLH---SMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEK 476 (601)
T ss_pred cccH-HHHHHHhcc-cccchhhhhHHHHHHHHHHHHHH---hcCceeccCccccEEEecCCceEEeecCcceeeccCcch
Confidence 9999 999988554 35888999999999999999999 88999999999999999999999999999987654333
Q ss_pred --ceeecccCCCCccccccccCCccCC-cccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCC
Q 040826 220 --KVFTDVRGTIGYMDPEYMTNAKLTC-ASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPR 296 (347)
Q Consensus 220 --~~~~~~~~~~~y~aPE~~~~~~~~~-~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (347)
.......|+..|+|||++.+..|.+ ..||||.|+++..|.+|+.||......+++....... .. ......
T Consensus 477 ~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~---~~--~~~~~~-- 549 (601)
T KOG0590|consen 477 NIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYS---DQ--RNIFEG-- 549 (601)
T ss_pred hhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccc---cc--cccccC--
Confidence 3355678999999999999988875 6899999999999999999998654443332100000 00 000000
Q ss_pred CCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 297 LNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 297 l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
...+......+...++.++|+.||.+|.|+++|++
T Consensus 550 -~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 550 -PNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred -hHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 00122344467888889999999999999999875
No 413
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.89 E-value=2.2e-23 Score=173.29 Aligned_cols=169 Identities=12% Similarity=0.052 Sum_probs=131.9
Q ss_pred HhcCcccCCeeeecCCeeEEEEEeCCCCEEEEEEcccCCC--hh---------HHHHHHHHhhcCCCCcceeeeeEEEeC
Q 040826 64 AINNDWDRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNN--TD---------SFSREVEGLSRVRHPNLVCLFGCCVEG 132 (347)
Q Consensus 64 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~---------~~~~e~~~l~~l~h~niv~~~~~~~~~ 132 (347)
..++|...+++|.|+||.||+... ++..+++|.+.+... .. .+.+|+..+.++.|++|..+..++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 467899999999999999999766 577899999975422 11 157899999999999999998886543
Q ss_pred --------CeEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceE
Q 040826 133 --------GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPK 204 (347)
Q Consensus 133 --------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~k 204 (347)
+..+++|||++|.+|.++.. ++. ....+++.++..+| ..|++|+|++|+|++++++| ++
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~----~~~~~i~~~l~~lH---~~gi~H~Dikp~Nili~~~g-i~ 174 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE-----ISE----DVKAKIKASIESLH---QHGMVSGDPHKGNFIVSKNG-LR 174 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh-----ccH----HHHHHHHHHHHHHH---HcCCccCCCChHHEEEeCCC-EE
Confidence 35899999999999988631 222 24568999999999 89999999999999999988 99
Q ss_pred EeecccceecCCCccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHH
Q 040826 205 LSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLL 259 (347)
Q Consensus 205 l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~ll 259 (347)
++|||........... ..++....+..++|+|+||+++..+.
T Consensus 175 liDfg~~~~~~e~~a~-------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 175 IIDLSGKRCTAQRKAK-------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEECCCcccccchhhH-------------HHHHHHhHhcccccccceeEeehHHH
Confidence 9999987654211111 01334445667999999999987764
No 414
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.89 E-value=8.9e-23 Score=167.70 Aligned_cols=136 Identities=21% Similarity=0.239 Sum_probs=107.2
Q ss_pred CeeeecCCeeEEEEEeCCCCEEEEEEcccCCC-----------hhH-----------------HHHHHHHhhcCCCCcce
Q 040826 72 RFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNN-----------TDS-----------------FSREVEGLSRVRHPNLV 123 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----------~~~-----------------~~~e~~~l~~l~h~niv 123 (347)
..||+|++|.||+|...+|+.||+|++..... ... ...|+..+.++.++++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~ 82 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIP 82 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 56999999999999987899999999865421 011 23488999999877764
Q ss_pred eeeeEEEeCCeEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHh-hhccCCCceeCCCCCCCEEecCCCc
Q 040826 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYL-HHYIDGCIVHRDIKLTNILLTEKLE 202 (347)
Q Consensus 124 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~L-h~~~~~~i~H~dl~p~Nili~~~~~ 202 (347)
........ ..++||||++++++...... ...++.....+++.|++.+|.++ | +.|++||||||+||+++ ++.
T Consensus 83 ~p~~~~~~--~~~iVmE~i~g~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~l~H---~~giiHrDlkP~NIli~-~~~ 155 (190)
T cd05147 83 CPEPILLK--SHVLVMEFIGDDGWAAPRLK-DAPLSESKARELYLQVIQIMRILYQ---DCRLVHADLSEYNLLYH-DGK 155 (190)
T ss_pred CCcEEEec--CCEEEEEEeCCCCCcchhhh-cCCCCHHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEE-CCc
Confidence 43332222 23899999999777654332 34688999999999999999999 6 77999999999999998 478
Q ss_pred eEEeecccceec
Q 040826 203 PKLSDFGLAKML 214 (347)
Q Consensus 203 ~kl~dfg~~~~~ 214 (347)
++|+|||++...
T Consensus 156 v~LiDFG~a~~~ 167 (190)
T cd05147 156 LYIIDVSQSVEH 167 (190)
T ss_pred EEEEEccccccC
Confidence 999999998754
No 415
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.88 E-value=7.6e-22 Score=162.75 Aligned_cols=138 Identities=22% Similarity=0.240 Sum_probs=109.6
Q ss_pred CCeeeecCCeeEEEEEeCCCCEEEEEEcccCCCh----------------------------hHHHHHHHHhhcCCCCcc
Q 040826 71 RRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNNT----------------------------DSFSREVEGLSRVRHPNL 122 (347)
Q Consensus 71 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----------------------------~~~~~e~~~l~~l~h~ni 122 (347)
...||+|++|+||+|...+|+.||+|.+...... ..+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3579999999999999778999999998764210 113478889999998887
Q ss_pred eeeeeEEEeCCeEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccC-CCceeCCCCCCCEEecCCC
Q 040826 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYID-GCIVHRDIKLTNILLTEKL 201 (347)
Q Consensus 123 v~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~-~~i~H~dl~p~Nili~~~~ 201 (347)
.....+... ..++||||++++++...... ...++.....+++.|++.++.++| . .|++|+||||+||+++ ++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~-~~~~~~~~~~~i~~~l~~~l~~lH---~~~givHrDlkP~NIll~-~~ 154 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLK-DVPLEEEEAEELYEQVVEQMRRLY---QEAGLVHGDLSEYNILYH-DG 154 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhh-hccCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCChhhEEEE-CC
Confidence 544443333 24899999998865443222 235778899999999999999999 6 8999999999999999 78
Q ss_pred ceEEeecccceecC
Q 040826 202 EPKLSDFGLAKMLG 215 (347)
Q Consensus 202 ~~kl~dfg~~~~~~ 215 (347)
.++|+|||++....
T Consensus 155 ~~~liDFG~a~~~~ 168 (190)
T cd05145 155 KPYIIDVSQAVELD 168 (190)
T ss_pred CEEEEEcccceecC
Confidence 99999999998754
No 416
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.88 E-value=4.2e-22 Score=181.06 Aligned_cols=219 Identities=27% Similarity=0.425 Sum_probs=166.9
Q ss_pred hhcCCCCcceeeeeEEEeCCeEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCC
Q 040826 114 LSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLT 193 (347)
Q Consensus 114 l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~ 193 (347)
|+.+.|.|+.+++|.+.++...+.|.+||..|+|.|.+......+++.-...+.++++.||.|||+ +.-..|+.+++.
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~--s~i~~hg~l~s~ 78 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHN--SPIGYHGALKSS 78 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhc--Ccceeeeeeccc
Confidence 467889999999999999999999999999999999998877778888999999999999999995 333499999999
Q ss_pred CEEecCCCceEEeecccceecCC-CccceeecccCCCCccccccccCCc-------cCCcccHHHHHHHHHHHHhCCCCc
Q 040826 194 NILLTEKLEPKLSDFGLAKMLGM-EESKVFTDVRGTIGYMDPEYMTNAK-------LTCASDIYSFGIVALQLLSGQKVI 265 (347)
Q Consensus 194 Nili~~~~~~kl~dfg~~~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~-------~~~~~Dv~slG~il~~lltg~~p~ 265 (347)
|.+++....+|++|||+...... ..........-..-|.|||.+.+.. .+.+.|+||||++++|+++.+.||
T Consensus 79 nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~ 158 (484)
T KOG1023|consen 79 NCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPF 158 (484)
T ss_pred cceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcc
Confidence 99999999999999999887532 1111122223455799999987641 466799999999999999999999
Q ss_pred CCChhhhhHHHHHHhhhcC-CCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhh
Q 040826 266 ELDFDARDQLTRKARDVSM-GKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWKNT 341 (347)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~~~ 341 (347)
.......+. .+....+.. +..+. .|.+... .+..+++..++.+||..+|.+||++.+|...++.+....
T Consensus 159 ~~~~~~~~~-~eii~~~~~~~~~~~----rP~i~~~--~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~~ 228 (484)
T KOG1023|consen 159 DLRNLVEDP-DEIILRVKKGGSNPF----RPSIELL--NELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKGG 228 (484)
T ss_pred ccccccCCh-HHHHHHHHhcCCCCc----Ccchhhh--hhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcccc
Confidence 864333332 112211221 11111 1111100 033457999999999999999999999999999987643
No 417
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.87 E-value=1.7e-21 Score=188.94 Aligned_cols=252 Identities=19% Similarity=0.188 Sum_probs=188.4
Q ss_pred HhcCcccCCeeeecCCeeEEEEEeCCCCEEEEEEcccCCChhHHHHHHHHhhcCC---CCcceeeeeEEEeCCeEEEEEe
Q 040826 64 AINNDWDRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVR---HPNLVCLFGCCVEGGEQYLVYE 140 (347)
Q Consensus 64 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e 140 (347)
-.+.|...+.+|+|+||+||.|...+|+.||+|.-.+....+. .--.+++.||+ -+.|+++..++...+..+||+|
T Consensus 696 ~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEf-YI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~e 774 (974)
T KOG1166|consen 696 GGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEF-YICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSE 774 (974)
T ss_pred cceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceee-eehHHHHHhhchhhhcchHHHHHHHccCCcceeeee
Confidence 3456777889999999999999987899999998876654432 22234555565 3456667777777788899999
Q ss_pred ecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEec-------CCCceEEeeccccee
Q 040826 141 FCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLT-------EKLEPKLSDFGLAKM 213 (347)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~-------~~~~~kl~dfg~~~~ 213 (347)
|.+.|||.+++. .....++...+.++.|++..+.+|| ..+|||+||||+|.||. ++..++|+|||.+..
T Consensus 775 y~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~lH---~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siD 850 (974)
T KOG1166|consen 775 YSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEHLH---AMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSID 850 (974)
T ss_pred ccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHHHH---hcceecccCCcceeEeecccCCCCcccceEEEeccccee
Confidence 999999999986 4556899999999999999999999 88999999999999995 344699999998876
Q ss_pred cCC-CccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccc
Q 040826 214 LGM-EESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDF 292 (347)
Q Consensus 214 ~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (347)
+.. .+...+...++|-.+--+|...|.+++..+|.|.|+.+++-||.|+..- ...+.. ..
T Consensus 851 m~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q----------------~~~g~~---~~ 911 (974)
T KOG1166|consen 851 MKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME----------------VKNGSS---WM 911 (974)
T ss_pred eeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH----------------hcCCcc---ee
Confidence 643 3334677888999999999999999999999999999999999997421 111110 11
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhhh
Q 040826 293 EDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEIDKAWKNTM 342 (347)
Q Consensus 293 ~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~~~~~~~~ 342 (347)
.++.+.--+.++. ..++....|..|-..=|...++...++..+.+..
T Consensus 912 ~~~~~~Ry~~~~~---W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~~~~~ 958 (974)
T KOG1166|consen 912 VKTNFPRYWKRDM---WNKFFDLLLNPDCDTLPNLQELRTELEEVLAEHF 958 (974)
T ss_pred ccccchhhhhHHH---HHHHHHHHhCcCcccchhHHHHHHHHHHHHHHHH
Confidence 1111111222333 3344444555444445889999999998877643
No 418
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.86 E-value=1e-22 Score=194.70 Aligned_cols=245 Identities=24% Similarity=0.255 Sum_probs=176.0
Q ss_pred CcccCCeeeecCCeeEEEEEeCCCCEEEEEEcccCCCh---hHHHHHHHH--hhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNNT---DSFSREVEG--LSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~~--l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
++...+.||.+.|=.|.+|+..+|. |+||++.+.... +.+.+++.- ...++|||.+++.-+...+...|||-+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy 102 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY 102 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence 4556678999999999999998888 899988765432 344444433 4455899999998887777788899999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceec-CCCcc-
Q 040826 142 CAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKML-GMEES- 219 (347)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~-~~~~~- 219 (347)
... +|+|.+.. .+.+..-+..=|+.|++.|+.-+| ..||+|||||.+||||+.=+-+.|+||..-+.. .+.+.
T Consensus 103 vkh-nLyDRlST-RPFL~~iEKkWiaFQLL~al~qcH---~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNP 177 (1431)
T KOG1240|consen 103 VKH-NLYDRLST-RPFLVLIEKKWIAFQLLKALSQCH---KLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNP 177 (1431)
T ss_pred Hhh-hhhhhhcc-chHHHHHHHHHHHHHHHHHHHHHH---HcCccccccccceEEEeeechhhhhcccccCCccCCCCCc
Confidence 877 99998843 344566666668899999999999 899999999999999999889999999765432 11111
Q ss_pred ce----eecccCCCCccccccccC----------Cc-cCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhh-
Q 040826 220 KV----FTDVRGTIGYMDPEYMTN----------AK-LTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDV- 282 (347)
Q Consensus 220 ~~----~~~~~~~~~y~aPE~~~~----------~~-~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~- 282 (347)
.. +.......+|.|||.+.. .+ .+++.||||+||++.||++ |+++|.. .++..+....
T Consensus 178 adf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L-----SQL~aYr~~~~ 252 (1431)
T KOG1240|consen 178 ADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL-----SQLLAYRSGNA 252 (1431)
T ss_pred ccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH-----HHHHhHhccCc
Confidence 11 222234557999997743 12 5678999999999999987 5777752 2222221110
Q ss_pred cCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 040826 283 SMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEI 334 (347)
Q Consensus 283 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l 334 (347)
..++.-+..+.| ..+.+|+..|++.||.+|.|+++.++.-
T Consensus 253 ~~~e~~Le~Ied------------~~~Rnlil~Mi~rdPs~RlSAedyL~~y 292 (1431)
T KOG1240|consen 253 DDPEQLLEKIED------------VSLRNLILSMIQRDPSKRLSAEDYLQKY 292 (1431)
T ss_pred cCHHHHHHhCcC------------ccHHHHHHHHHccCchhccCHHHHHHhh
Confidence 000000111111 2589999999999999999999999873
No 419
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.86 E-value=6.8e-21 Score=155.08 Aligned_cols=182 Identities=15% Similarity=0.070 Sum_probs=136.6
Q ss_pred cCCeeeecCCeeEEEEEeCCCCEEEEEEcccCCCh------hHHHHHHHHhhcCC-CCcceeeeeEEEeCCeEEEEEeec
Q 040826 70 DRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNNT------DSFSREVEGLSRVR-HPNLVCLFGCCVEGGEQYLVYEFC 142 (347)
Q Consensus 70 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~------~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~ 142 (347)
....|++|+||+|+.+.. .+..++.+.+...... ..+.+|+++|++++ |+++..++++ +..+++|||+
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI 80 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL 80 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence 456799999999997766 6777887777655442 14778999999995 5788888875 3468999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCC-CCCCEEecCCCceEEeecccceecCCCccc-
Q 040826 143 AAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDI-KLTNILLTEKLEPKLSDFGLAKMLGMEESK- 220 (347)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl-~p~Nili~~~~~~kl~dfg~~~~~~~~~~~- 220 (347)
+|.+|...... ....++.|+++++.++| +.|++|||| ||+|||++.++.++|+|||++.........
T Consensus 81 ~G~~L~~~~~~--------~~~~~~~qi~~~L~~lH---~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~ 149 (218)
T PRK12274 81 AGAAMYQRPPR--------GDLAYFRAARRLLQQLH---RCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWM 149 (218)
T ss_pred cCccHHhhhhh--------hhHHHHHHHHHHHHHHH---HCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHH
Confidence 99888654311 11357889999999999 899999999 799999999999999999999865432210
Q ss_pred ---ee--------ecccCCCCccccccccC-CccC-CcccHHHHHHHHHHHHhCCCCcCC
Q 040826 221 ---VF--------TDVRGTIGYMDPEYMTN-AKLT-CASDIYSFGIVALQLLSGQKVIEL 267 (347)
Q Consensus 221 ---~~--------~~~~~~~~y~aPE~~~~-~~~~-~~~Dv~slG~il~~lltg~~p~~~ 267 (347)
.. .-...++.|++|+...- ...+ ...+.++.|.-+|.++|++.+.-.
T Consensus 150 r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 150 RLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 00 00125677777774432 1223 578999999999999999987653
No 420
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.85 E-value=3.7e-21 Score=164.69 Aligned_cols=227 Identities=19% Similarity=0.235 Sum_probs=143.1
Q ss_pred ccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCC-----hhHHHHHHHHhhcCC----------CCcceeeeeEEE--
Q 040826 69 WDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNN-----TDSFSREVEGLSRVR----------HPNLVCLFGCCV-- 130 (347)
Q Consensus 69 ~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~----------h~niv~~~~~~~-- 130 (347)
...+.||.|+++.||.++.. +|+.+++|....... .+.+.+|.-....+. |-.++-.++...
T Consensus 15 ~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~ 94 (288)
T PF14531_consen 15 VRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIP 94 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEET
T ss_pred EEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEc
Confidence 34567999999999999965 689999998865432 234555544333321 112222222211
Q ss_pred -------eC---C-----eEEEEEeecCCCChHHHhh---cCCC---CCCHHHHHHHHHHHHHHHHHhhhccCCCceeCC
Q 040826 131 -------EG---G-----EQYLVYEFCAAGNLAQHLL---RKDS---VLTWERRVKILRDCALALRYLHHYIDGCIVHRD 189 (347)
Q Consensus 131 -------~~---~-----~~~lv~e~~~~gsL~~~l~---~~~~---~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~d 189 (347)
.. + +.+++|+-+.+ +|.+++. .... .+....++.+..|+.+.+++|| ..|++|+|
T Consensus 95 ~~~~~~~~~~~~~~~~v~n~~~l~P~~~~-dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh---~~GlVHgd 170 (288)
T PF14531_consen 95 GKPPFFERGPGQSIYWVLNRFLLMPRAQG-DLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLH---SYGLVHGD 170 (288)
T ss_dssp TS-SEEEECETTEEEEEESEEEEEE--SE-EHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEEEST
T ss_pred CCCcceecCCCCccceeehhhhccchhhh-cHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHh---hcceEecc
Confidence 11 1 23678888866 8888763 2221 2334455667789999999999 88999999
Q ss_pred CCCCCEEecCCCceEEeecccceecCCCccceeecccCCCCccccccccC--------CccCCcccHHHHHHHHHHHHhC
Q 040826 190 IKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTN--------AKLTCASDIYSFGIVALQLLSG 261 (347)
Q Consensus 190 l~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Dv~slG~il~~lltg 261 (347)
|+|+|++++.+|.+.|+||+.....+. .......+..|.|||.... -.++.+.|.|+||+++|.|+++
T Consensus 171 i~~~nfll~~~G~v~Lg~F~~~~r~g~----~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~ 246 (288)
T PF14531_consen 171 IKPENFLLDQDGGVFLGDFSSLVRAGT----RYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCG 246 (288)
T ss_dssp -SGGGEEE-TTS-EEE--GGGEEETTE----EEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHS
T ss_pred cceeeEEEcCCCCEEEcChHHHeecCc----eeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHc
Confidence 999999999999999999988776432 1111345678999997643 2578899999999999999999
Q ss_pred CCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCC
Q 040826 262 QKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGR 324 (347)
Q Consensus 262 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~R 324 (347)
..||........... .-..+. +.++.+..|+..+|+.||.+|
T Consensus 247 ~lPf~~~~~~~~~~~--------------------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 247 RLPFGLSSPEADPEW--------------------DFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp S-STCCCGGGSTSGG--------------------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred cCCCCCCCccccccc--------------------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 999985432211100 001233 566789999999999999988
No 421
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.85 E-value=2.8e-22 Score=182.46 Aligned_cols=229 Identities=29% Similarity=0.336 Sum_probs=180.9
Q ss_pred eeecCCeeEEEEEe----CCCCEEEEEEcccCC----ChhHHHHHHHHhhcCC-CCcceeeeeEEEeCCeEEEEEeecCC
Q 040826 74 LGRGSAGLVYKGVL----PSGQVVAIKHIYKSN----NTDSFSREVEGLSRVR-HPNLVCLFGCCVEGGEQYLVYEFCAA 144 (347)
Q Consensus 74 lg~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~ 144 (347)
+|+|.||.|+++.. +.|..+++|.+.+.. .......|-.++..++ ||.++++...+..++..++++++..+
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 78999999998862 356788888876542 2224556777888886 99999999999999999999999999
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeec
Q 040826 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTD 224 (347)
Q Consensus 145 gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 224 (347)
|.|...+.+. ..+.+.........++-++.++| +.+++|+|+|++||+++.+|.+++.|||+++..-....
T Consensus 82 g~lft~l~~~-~~f~~~~~~~~~aelaLald~lh---~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~----- 152 (612)
T KOG0603|consen 82 GDLFTRLSKE-VMFDELDVAFYLAELALALDHLH---KLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI----- 152 (612)
T ss_pred chhhhccccC-CchHHHHHHHHHHHHHHHHhhcc---hhHHHHhcccccceeecccCccccCCchhhhHhHhhhh-----
Confidence 9998877543 44677777778888999999999 89999999999999999999999999999986432211
Q ss_pred ccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHH
Q 040826 225 VRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRA 304 (347)
Q Consensus 225 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 304 (347)
.+||..|||||++. ....++|.||||+++++|+||..||.. + ..+.+...+. .+++.
T Consensus 153 ~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~-----~----~~~~Il~~~~------------~~p~~ 209 (612)
T KOG0603|consen 153 ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG-----D----TMKRILKAEL------------EMPRE 209 (612)
T ss_pred cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch-----H----HHHHHhhhcc------------CCchh
Confidence 17999999999998 567799999999999999999999984 2 2222221111 34556
Q ss_pred HHHHHHHHHHHhccCCCCCCCCH--HHHHHHH
Q 040826 305 DFESILKIAVLCVAKSSKGRPTI--DVVYEEI 334 (347)
Q Consensus 305 ~~~~l~~l~~~cl~~~p~~Rps~--~ei~~~l 334 (347)
.......++..++..+|.+|.-. ..+.+..
T Consensus 210 l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik 241 (612)
T KOG0603|consen 210 LSAEARSLFRQLFKRNPENRLGAGPDGVDEIK 241 (612)
T ss_pred hhHHHHHHHHHHHhhCHHHHhccCcchhHHHh
Confidence 66788888999999999999665 3444433
No 422
>PRK10345 hypothetical protein; Provisional
Probab=99.82 E-value=1.7e-19 Score=149.58 Aligned_cols=134 Identities=22% Similarity=0.257 Sum_probs=103.3
Q ss_pred ccCCeeeecCCeeEEEEEeCCCCEEEEEEcccC--CChhHHHHHHHHhhcC-----CCCcceeeeeEEEeCC---e-EEE
Q 040826 69 WDRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKS--NNTDSFSREVEGLSRV-----RHPNLVCLFGCCVEGG---E-QYL 137 (347)
Q Consensus 69 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~e~~~l~~l-----~h~niv~~~~~~~~~~---~-~~l 137 (347)
...++||+|+||.||. .+.....+||++... .....+.+|+..++.+ .||||++++|++.++. . +.+
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~ 82 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV 82 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence 3457899999999996 433333468887653 2345789999999999 5799999999998863 3 347
Q ss_pred EEee--cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHH-HHhhhccCCCceeCCCCCCCEEecC----CCceEEeeccc
Q 040826 138 VYEF--CAAGNLAQHLLRKDSVLTWERRVKILRDCALAL-RYLHHYIDGCIVHRDIKLTNILLTE----KLEPKLSDFGL 210 (347)
Q Consensus 138 v~e~--~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l-~~Lh~~~~~~i~H~dl~p~Nili~~----~~~~kl~dfg~ 210 (347)
|+|| +.++||.+++.+. .+++. ..++.|++.++ .||| +++|+||||||+||+++. ++.++|+||+.
T Consensus 83 I~e~~G~~~~tL~~~l~~~--~~~e~--~~~~~~~L~~l~~yLh---~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G 155 (210)
T PRK10345 83 IADFDGKPSITLTEFAEQC--RYEED--VAQLRQLLKKLKRYLL---DNRIVTMELKPQNILCQRISESEVIPVVCDNIG 155 (210)
T ss_pred EecCCCCcchhHHHHHHcc--cccHh--HHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEeccCCCCCcEEEEECCC
Confidence 8999 5678999999653 35555 35677888777 9999 889999999999999974 33799999543
Q ss_pred c
Q 040826 211 A 211 (347)
Q Consensus 211 ~ 211 (347)
+
T Consensus 156 ~ 156 (210)
T PRK10345 156 E 156 (210)
T ss_pred C
Confidence 3
No 423
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.82 E-value=1.2e-19 Score=156.81 Aligned_cols=197 Identities=19% Similarity=0.223 Sum_probs=139.6
Q ss_pred CCCcceeeeeEEEe---------------------------CCeEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHH
Q 040826 118 RHPNLVCLFGCCVE---------------------------GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDC 170 (347)
Q Consensus 118 ~h~niv~~~~~~~~---------------------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi 170 (347)
.||||+++.++|.+ ....|+||..++. ||.+++-. ...+.....-++.|+
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~--~~~s~r~~~~~laQl 350 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWT--RHRSYRTGRVILAQL 350 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhc--CCCchHHHHHHHHHH
Confidence 49999999987643 1246899999887 99999844 346777788899999
Q ss_pred HHHHHHhhhccCCCceeCCCCCCCEEec--CCC--ceEEeecccceecCCC-----ccceeecccCCCCccccccccCCc
Q 040826 171 ALALRYLHHYIDGCIVHRDIKLTNILLT--EKL--EPKLSDFGLAKMLGME-----ESKVFTDVRGTIGYMDPEYMTNAK 241 (347)
Q Consensus 171 ~~~l~~Lh~~~~~~i~H~dl~p~Nili~--~~~--~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~ 241 (347)
++|+.||| .+|+.|||+|++|||+. +|+ .++++|||.+---... .....-..-|...-||||+....+
T Consensus 351 LEav~hL~---~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~P 427 (598)
T KOG4158|consen 351 LEAVTHLH---KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVP 427 (598)
T ss_pred HHHHHHHH---HccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCC
Confidence 99999999 89999999999999984 333 4799999976532110 001111234778899999886432
Q ss_pred ------cCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHH
Q 040826 242 ------LTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVL 315 (347)
Q Consensus 242 ------~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~ 315 (347)
--.++|.|+.|.+.||+++...||+......-+. +.+.+-.-|.+.+ .+...+.+|+..
T Consensus 428 Gp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~-----------r~Yqe~qLPalp~----~vpp~~rqlV~~ 492 (598)
T KOG4158|consen 428 GPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDT-----------RTYQESQLPALPS----RVPPVARQLVFD 492 (598)
T ss_pred CCceeeccchhhhhhhhhhHHHHhccCCcccccchheech-----------hhhhhhhCCCCcc----cCChHHHHHHHH
Confidence 1248999999999999999999998521111111 1122222222222 333578999999
Q ss_pred hccCCCCCCCCHHHHHHHHH
Q 040826 316 CVAKSSKGRPTIDVVYEEID 335 (347)
Q Consensus 316 cl~~~p~~Rps~~ei~~~l~ 335 (347)
.|+.||.+|+|..-....|+
T Consensus 493 lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 493 LLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred HhcCCccccCCccHHHhHHH
Confidence 99999999999876665554
No 424
>smart00090 RIO RIO-like kinase.
Probab=99.81 E-value=2.8e-19 Score=151.87 Aligned_cols=139 Identities=20% Similarity=0.170 Sum_probs=109.0
Q ss_pred CcccCCeeeecCCeeEEEEE--eCCCCEEEEEEcccCCC--------------------------hhHHHHHHHHhhcCC
Q 040826 67 NDWDRRFLGRGSAGLVYKGV--LPSGQVVAIKHIYKSNN--------------------------TDSFSREVEGLSRVR 118 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~--~~~~~~vavK~~~~~~~--------------------------~~~~~~e~~~l~~l~ 118 (347)
.|...+.||+|++|.||+|. ..+|+.||+|.+..... ...+..|+..+.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47778899999999999998 56899999998865321 012457999999997
Q ss_pred CCc--ceeeeeEEEeCCeEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCC-ceeCCCCCCCE
Q 040826 119 HPN--LVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC-IVHRDIKLTNI 195 (347)
Q Consensus 119 h~n--iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~-i~H~dl~p~Ni 195 (347)
+.+ +.++++. ...++||||+++++|....... ..+.......++.|++.++.+|| ..| ++|+||||+||
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH---~~g~iiH~Dikp~NI 180 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD-VEPEEEEEFELYDDILEEMRKLY---KEGELVHGDLSEYNI 180 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCccccccccc-CCcchHHHHHHHHHHHHHHHHHH---hcCCEEeCCCChhhE
Confidence 532 3334432 2358999999998887654332 34566677899999999999999 788 99999999999
Q ss_pred EecCCCceEEeecccceec
Q 040826 196 LLTEKLEPKLSDFGLAKML 214 (347)
Q Consensus 196 li~~~~~~kl~dfg~~~~~ 214 (347)
+++ ++.++|+|||.+...
T Consensus 181 li~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 181 LVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred EEE-CCCEEEEEChhhhcc
Confidence 999 889999999988754
No 425
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.80 E-value=6.9e-19 Score=147.91 Aligned_cols=132 Identities=23% Similarity=0.332 Sum_probs=111.5
Q ss_pred CeeeecCCeeEEEEEeCCCCEEEEEEcccCCC----------hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEee
Q 040826 72 RFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNN----------TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEF 141 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~----------~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 141 (347)
+.||+|++|.||+|.. +|..+++|....... ...+.+|+.++..+.|+++.....++.+.+..+++|||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 4699999999999998 677899997654321 12467899999999999888777777777788999999
Q ss_pred cCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeeccccee
Q 040826 142 CAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKM 213 (347)
Q Consensus 142 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~ 213 (347)
++|++|.+++.... . ....++.+++.++.++| +.+++|+|++|+||+++ ++.++++|||.+..
T Consensus 81 ~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~lH---~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG----M-EELELSREIGRLVGKLH---SAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHHH---hCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999885422 2 78889999999999999 88999999999999999 78999999998764
No 426
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.79 E-value=1.6e-18 Score=144.08 Aligned_cols=135 Identities=17% Similarity=0.149 Sum_probs=106.6
Q ss_pred CcccCCeeeecCCeeEEEEEeCCCCEEEEEEcccCCC------------------------hhHHHHHHHHhhcCCCCc-
Q 040826 67 NDWDRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNN------------------------TDSFSREVEGLSRVRHPN- 121 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~------------------------~~~~~~e~~~l~~l~h~n- 121 (347)
.|...+.||+|+||.||++...+|+.||||++..+.. ......|...+..+.|++
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 3667788999999999999988899999998654320 112567888888887764
Q ss_pred -ceeeeeEEEeCCeEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCC
Q 040826 122 -LVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEK 200 (347)
Q Consensus 122 -iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~ 200 (347)
+...++ ....+++|||+++++|.+.... .....++.+++.++.++| ..|++|+||+|+||+++++
T Consensus 96 ~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~-------~~~~~~~~~i~~~l~~lh---~~gi~H~Dl~p~Nill~~~ 161 (198)
T cd05144 96 PVPKPID----WNRHAVVMEYIDGVELYRVRVL-------EDPEEVLDEILEEIVKAY---KHGIIHGDLSEFNILVDDD 161 (198)
T ss_pred CCCceee----cCCceEEEEEeCCcchhhcccc-------ccHHHHHHHHHHHHHHHH---HCCCCcCCCCcccEEEcCC
Confidence 333333 2456899999999998765421 345678899999999999 7899999999999999999
Q ss_pred CceEEeecccceecC
Q 040826 201 LEPKLSDFGLAKMLG 215 (347)
Q Consensus 201 ~~~kl~dfg~~~~~~ 215 (347)
+.++|+|||++....
T Consensus 162 ~~~~liDfg~~~~~~ 176 (198)
T cd05144 162 EKIYIIDWPQMVSTD 176 (198)
T ss_pred CcEEEEECCccccCC
Confidence 999999999987543
No 427
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.78 E-value=7.8e-20 Score=163.54 Aligned_cols=172 Identities=25% Similarity=0.402 Sum_probs=129.8
Q ss_pred eEEEEEeecCCCChHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccc
Q 040826 134 EQYLVYEFCAAGNLAQHLLR--KDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLA 211 (347)
Q Consensus 134 ~~~lv~e~~~~gsL~~~l~~--~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~ 211 (347)
..++.|++|...+|.+++.. .....++.....++.|++.|+.| ++.+|+|+||.||++..+..+||+|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhhhe
Confidence 46899999999999999964 34567888999999999999998 57899999999999999999999999998
Q ss_pred eecCCCc-----cceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHh-CCCCcCCChhhhhHHHHHHhhhcCC
Q 040826 212 KMLGMEE-----SKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLS-GQKVIELDFDARDQLTRKARDVSMG 285 (347)
Q Consensus 212 ~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~llt-g~~p~~~~~~~~~~~~~~~~~~~~~ 285 (347)
....... ....+...||..||+||.+.+..|+.++||||||++|+|+++ -..++. - .....++..+
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e----r----~~t~~d~r~g 475 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE----R----IATLTDIRDG 475 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH----H----HHhhhhhhcC
Confidence 8765333 233555679999999999999999999999999999999997 333322 1 1111222222
Q ss_pred CCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHH
Q 040826 286 KRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVV 330 (347)
Q Consensus 286 ~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei 330 (347)
.-+ |....+. +.=+.|+++++.+.|.+||++.+.
T Consensus 476 ~ip------~~~~~d~-----p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 476 IIP------PEFLQDY-----PEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred CCC------hHHhhcC-----cHHHHHHHHhcCCCcccCchHHHH
Confidence 211 0000011 235678889999999999954443
No 428
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.78 E-value=2.2e-18 Score=143.50 Aligned_cols=128 Identities=24% Similarity=0.371 Sum_probs=104.3
Q ss_pred eeeecCCeeEEEEEeCCCCEEEEEEcccCC--C--------hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeec
Q 040826 73 FLGRGSAGLVYKGVLPSGQVVAIKHIYKSN--N--------TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFC 142 (347)
Q Consensus 73 ~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~--------~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 142 (347)
.||+|++|.||+|.+ +|..+++|...... . ...+.+|+++++.+.|+++.....++...+..+++|||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 389999999999996 57789999865421 1 134668999999998887655555555666778999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeeccccee
Q 040826 143 AAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKM 213 (347)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~ 213 (347)
+|++|.+.+..... .++.|++.+|.+|| +.+++|+|++|+||+++ ++.++++|||.+..
T Consensus 80 ~g~~l~~~~~~~~~--------~~~~~i~~~l~~lH---~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGND--------ELLREIGRLVGKLH---KAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcHH--------HHHHHHHHHHHHHH---HCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999987743211 78999999999999 88999999999999999 78999999998765
No 429
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.76 E-value=5.9e-18 Score=161.23 Aligned_cols=134 Identities=24% Similarity=0.325 Sum_probs=108.9
Q ss_pred cCcccCCeeeecCCeeEEEEEeCCCCEEEEEE-cccC-C--------ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeE
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLPSGQVVAIKH-IYKS-N--------NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQ 135 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~-~~~~-~--------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 135 (347)
..|...+.||+|+||.||+|.+.++. +++|+ .... . ....+.+|+++++.++|+++.....++.+....
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~ 411 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK 411 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence 34456788999999999999975544 33333 2221 1 123577899999999999998887777777778
Q ss_pred EEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeeccccee
Q 040826 136 YLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKM 213 (347)
Q Consensus 136 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~ 213 (347)
++||||+++++|.+++. ....++.|+++++.+|| +.+++||||||+||++ +++.++|+|||+++.
T Consensus 412 ~lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH---~~giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 412 TIVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLH---KAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred EEEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHH---hCCCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 99999999999999874 35678999999999999 8899999999999999 677999999999875
No 430
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.73 E-value=5.6e-18 Score=162.31 Aligned_cols=210 Identities=25% Similarity=0.259 Sum_probs=140.1
Q ss_pred cCcccCCeeeecCCeeEEEEEeC-CCCEEEEEEcccCCChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCC
Q 040826 66 NNDWDRRFLGRGSAGLVYKGVLP-SGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAA 144 (347)
Q Consensus 66 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 144 (347)
++|...+.+..|++|-||...++ +.+..|+|.-+... +++ ||..+ .+..+.|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~kiNkq~l----------ilR-----nilt~------a~npfvv------ 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQNL----------ILR-----NILTF------AGNPFVV------ 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhcccccch----------hhh-----ccccc------cCCccee------
Confidence 45667788999999999999865 56777874321111 111 11111 1122223
Q ss_pred CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCc------
Q 040826 145 GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEE------ 218 (347)
Q Consensus 145 gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~------ 218 (347)
|+-.+.+...+ .++... +.+++||| +.||+|||+||+|.+|+.-|.+|++|||++.......
T Consensus 136 gDc~tllk~~g-~lPvdm--------vla~Eylh---~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~e 203 (1205)
T KOG0606|consen 136 GDCATLLKNIG-PLPVDM--------VLAVEYLH---SYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKE 203 (1205)
T ss_pred chhhhhcccCC-CCcchh--------hHHhHhhc---cCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhh
Confidence 34344343322 233222 77999999 8999999999999999999999999999987542111
Q ss_pred ------cc--eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcc
Q 040826 219 ------SK--VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIK 290 (347)
Q Consensus 219 ------~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (347)
.. .-...+||+.|.|||++....|...+|+|++|+++|+.+.|..||..+.+.+ -+..++.+... ..
T Consensus 204 g~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpee-lfg~visd~i~----wp 278 (1205)
T KOG0606|consen 204 GHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE-LFGQVISDDIE----WP 278 (1205)
T ss_pred cchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHH-HHhhhhhhhcc----cc
Confidence 01 1234579999999999999999999999999999999999999998663321 11112211110 00
Q ss_pred cccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHH
Q 040826 291 DFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTID 328 (347)
Q Consensus 291 ~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ 328 (347)
+-+.....+..+++.+.|+.+|..|---.
T Consensus 279 ---------E~dea~p~Ea~dli~~LL~qnp~~Rlgt~ 307 (1205)
T KOG0606|consen 279 ---------EEDEALPPEAQDLIEQLLRQNPLCRLGTG 307 (1205)
T ss_pred ---------ccCcCCCHHHHHHHHHHHHhChHhhcccc
Confidence 01122335789999999999999995433
No 431
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.71 E-value=1.5e-16 Score=126.16 Aligned_cols=134 Identities=20% Similarity=0.167 Sum_probs=113.1
Q ss_pred CCeeeecCCeeEEEEEeCCCCEEEEEEcccCCChhHHHHHHHHhhcCCC--CcceeeeeEEEeCCeEEEEEeecCCCChH
Q 040826 71 RRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRH--PNLVCLFGCCVEGGEQYLVYEFCAAGNLA 148 (347)
Q Consensus 71 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 148 (347)
.+.||+|.++.||++...+ ..+++|..........+.+|...++.++| .++.+++++....+..++++||++++++.
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~ 81 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREKGADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLD 81 (155)
T ss_pred ceecccccccceEEEEecC-CeEEEEecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeecc
Confidence 4679999999999999854 78999988665445678899999999976 58888888887778899999999987775
Q ss_pred HHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeeccccee
Q 040826 149 QHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKM 213 (347)
Q Consensus 149 ~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~ 213 (347)
.+ +......++.++++++.++|.....+++|+|++|+||++++.+.+++.|||.+..
T Consensus 82 ~~--------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 82 EV--------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred cC--------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 43 5566778899999999999954446899999999999999989999999998764
No 432
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.70 E-value=1.7e-16 Score=130.69 Aligned_cols=135 Identities=21% Similarity=0.236 Sum_probs=96.6
Q ss_pred CCeeeecCCeeEEEEEeCCCCEEEEEEcccCCCh----hH----------------------HHHHHHHhhcCCCCc--c
Q 040826 71 RRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNNT----DS----------------------FSREVEGLSRVRHPN--L 122 (347)
Q Consensus 71 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~----------------------~~~e~~~l~~l~h~n--i 122 (347)
.+.||+|+||.||+|...+|+.||+|.+...... .. ...|...+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 3579999999999999878999999988653211 11 124555555554332 3
Q ss_pred eeeeeEEEeCCeEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccC-CCceeCCCCCCCEEecCCC
Q 040826 123 VCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYID-GCIVHRDIKLTNILLTEKL 201 (347)
Q Consensus 123 v~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~-~~i~H~dl~p~Nili~~~~ 201 (347)
.+.+++ ...+++|||++++++......... . ......++.+++.++.++| . .+++|+||+|+||+++ ++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~-~-~~~~~~~~~~~~~~l~~lh---~~~~ivH~Dl~p~Nili~-~~ 151 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR-L-LEDPEELYDQILELMRKLY---REAGLVHGDLSEYNILVD-DG 151 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh-h-cccHHHHHHHHHHHHHHHh---hccCcCcCCCChhhEEEE-CC
Confidence 334332 245899999999543221111100 1 1667889999999999999 6 8999999999999999 88
Q ss_pred ceEEeecccceecC
Q 040826 202 EPKLSDFGLAKMLG 215 (347)
Q Consensus 202 ~~kl~dfg~~~~~~ 215 (347)
.++++|||.+....
T Consensus 152 ~~~liDfg~a~~~~ 165 (187)
T cd05119 152 KVYIIDVPQAVEID 165 (187)
T ss_pred cEEEEECccccccc
Confidence 99999999987643
No 433
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.68 E-value=7.7e-15 Score=135.56 Aligned_cols=139 Identities=20% Similarity=0.196 Sum_probs=98.6
Q ss_pred CCeeeecCCeeEEEEEeCCCCEEEEEEcccCCChh------------------------------------------HHH
Q 040826 71 RRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTD------------------------------------------SFS 108 (347)
Q Consensus 71 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~------------------------------------------~~~ 108 (347)
.++||.|++|+||+|++.+|+.||||+..+..... ++.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 47899999999999999999999999986542110 234
Q ss_pred HHHHHhhcCC----CCcceeeeeEEE-eCCeEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHH-HHHHhhhccC
Q 040826 109 REVEGLSRVR----HPNLVCLFGCCV-EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCAL-ALRYLHHYID 182 (347)
Q Consensus 109 ~e~~~l~~l~----h~niv~~~~~~~-~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~-~l~~Lh~~~~ 182 (347)
+|...+.++. |.+-+.+-..+. ..+..++||||++|++|.+.......... ..+++.+++. .+..+| .
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~---~ 275 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVL---R 275 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHH---h
Confidence 4555555442 322233333332 24467999999999999887643221122 3345555555 467778 7
Q ss_pred CCceeCCCCCCCEEecCCCceEEeecccceecC
Q 040826 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLG 215 (347)
Q Consensus 183 ~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 215 (347)
.|++|+|++|+||++++++.++++|||++..+.
T Consensus 276 ~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 276 DGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred CCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 899999999999999999999999999988653
No 434
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.68 E-value=7.3e-16 Score=131.24 Aligned_cols=133 Identities=20% Similarity=0.228 Sum_probs=103.3
Q ss_pred CCeee-ecCCeeEEEEEeCCCCEEEEEEcccCC---------------ChhHHHHHHHHhhcCCCCcc--eeeeeEEEeC
Q 040826 71 RRFLG-RGSAGLVYKGVLPSGQVVAIKHIYKSN---------------NTDSFSREVEGLSRVRHPNL--VCLFGCCVEG 132 (347)
Q Consensus 71 ~~~lg-~G~~g~V~~~~~~~~~~vavK~~~~~~---------------~~~~~~~e~~~l~~l~h~ni--v~~~~~~~~~ 132 (347)
...|| .||.|+||.+... +..+++|.+.... ....+.+|+.++.++.|+++ +..+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 35688 8999999999984 6778888774321 12356789999999988774 5666654332
Q ss_pred -C---eEEEEEeecCC-CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEee
Q 040826 133 -G---EQYLVYEFCAA-GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSD 207 (347)
Q Consensus 133 -~---~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~d 207 (347)
. ..++|+|++++ .+|.+++... .++.. .+.|+++++.+|| ..|++|+||||+|||++.++.++|+|
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~--~l~~~----~~~~i~~~l~~lH---~~GI~HrDlkp~NILv~~~~~v~LID 185 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA--PLSEE----QWQAIGQLIARFH---DAGVYHADLNAHNILLDPDGKFWLID 185 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC--CCCHH----HHHHHHHHHHHHH---HCCCCCCCCCchhEEEcCCCCEEEEE
Confidence 2 23599999997 6898887442 34443 3578999999999 89999999999999999999999999
Q ss_pred ccccee
Q 040826 208 FGLAKM 213 (347)
Q Consensus 208 fg~~~~ 213 (347)
||.+..
T Consensus 186 fg~~~~ 191 (239)
T PRK01723 186 FDRGEL 191 (239)
T ss_pred CCCccc
Confidence 998875
No 435
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.67 E-value=9.6e-18 Score=159.53 Aligned_cols=250 Identities=20% Similarity=0.230 Sum_probs=185.2
Q ss_pred cccCCeeeecCCeeEEEEEeC--CCCEEEEEEcccCC-C---hhHHHHHHHHhhcCC-CCcceeeeeEEEeCCeEEEEEe
Q 040826 68 DWDRRFLGRGSAGLVYKGVLP--SGQVVAIKHIYKSN-N---TDSFSREVEGLSRVR-HPNLVCLFGCCVEGGEQYLVYE 140 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~-~---~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e 140 (347)
|...+.||+|+|+.|-..... ....+++|.+.... . ......|..+-+.++ |+|++.+++...+.+..++.++
T Consensus 22 ~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~ 101 (601)
T KOG0590|consen 22 YKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLS 101 (601)
T ss_pred ccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccccC
Confidence 444566999999999888753 34456666665432 1 123444666777776 9999999999999999999999
Q ss_pred ecCCCChHHHh-hcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCC-ceEEeecccceecCC--
Q 040826 141 FCAAGNLAQHL-LRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKL-EPKLSDFGLAKMLGM-- 216 (347)
Q Consensus 141 ~~~~gsL~~~l-~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~-~~kl~dfg~~~~~~~-- 216 (347)
|.+++++.+-+ .......+.......+.|+..++.|+|. ..++.|+|++|+|.+++..+ .+++.|||++..+..
T Consensus 102 ~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~--~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~ 179 (601)
T KOG0590|consen 102 YSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHP--ENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKN 179 (601)
T ss_pred cccccccccccccCCccCCCCcchhhhhhhhccCccccCc--ccccccCCCCCccchhccCCCcccCCCchhhccccccC
Confidence 99999998877 3333256777788899999999999996 56899999999999999999 999999999998765
Q ss_pred CccceeecccC-CCCccccccccCC-ccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccC
Q 040826 217 EESKVFTDVRG-TIGYMDPEYMTNA-KLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFED 294 (347)
Q Consensus 217 ~~~~~~~~~~~-~~~y~aPE~~~~~-~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (347)
..........| ++.|.|||...+. ...+..|+||.|+++.-+++|..|+............+...-.. ..
T Consensus 180 g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~--------~~ 251 (601)
T KOG0590|consen 180 GAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGR--------FT 251 (601)
T ss_pred CcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccc--------cc
Confidence 22333455667 9999999999884 55678999999999999999999987654443332222221100 00
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHH
Q 040826 295 PRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVY 331 (347)
Q Consensus 295 ~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~ 331 (347)
....+.+. ....++...++..+|..|.+.+++-
T Consensus 252 ~~~~~~~~----~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 252 QLPWNSIS----DQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred cCccccCC----hhhhhcccccccCCchhcccccccc
Confidence 11111222 3466777778889999999988764
No 436
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.58 E-value=9.8e-14 Score=129.83 Aligned_cols=140 Identities=16% Similarity=0.142 Sum_probs=93.5
Q ss_pred hcCcccCCeeeecCCeeEEEEEeCC-CCEEEEEEcccCCCh------------------------------------h--
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVLPS-GQVVAIKHIYKSNNT------------------------------------D-- 105 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~------------------------------------~-- 105 (347)
...|+. ++||+|++|+||+|++++ |+.||||+..+.... .
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 344655 789999999999999876 999999999754210 0
Q ss_pred ----HHHHHHHHhhcCC----CCcceeeeeEEEe-CCeEEEEEeecCCCChHHHh--hcCCC---CCCHHHHHHHHHHHH
Q 040826 106 ----SFSREVEGLSRVR----HPNLVCLFGCCVE-GGEQYLVYEFCAAGNLAQHL--LRKDS---VLTWERRVKILRDCA 171 (347)
Q Consensus 106 ----~~~~e~~~l~~l~----h~niv~~~~~~~~-~~~~~lv~e~~~~gsL~~~l--~~~~~---~~~~~~~~~i~~qi~ 171 (347)
++.+|...+.++. +.+.+.+-.++.+ .+..++||||++|+++.+.- ...+. .+.......++.|+
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi- 276 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV- 276 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-
Confidence 1334444444442 3333443344332 45678999999999998743 22221 12222222333333
Q ss_pred HHHHHhhhccCCCceeCCCCCCCEEecCCC----ceEEeecccceecC
Q 040826 172 LALRYLHHYIDGCIVHRDIKLTNILLTEKL----EPKLSDFGLAKMLG 215 (347)
Q Consensus 172 ~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~----~~kl~dfg~~~~~~ 215 (347)
. ..|++|+|++|+||+++.++ .+++.|||++..+.
T Consensus 277 ------f---~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 277 ------F---RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred ------H---hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 2 56999999999999999888 99999999988753
No 437
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.55 E-value=1.5e-14 Score=122.61 Aligned_cols=201 Identities=22% Similarity=0.263 Sum_probs=140.4
Q ss_pred HHhhcCCCCcceeeeeEEEeC-----CeEEEEEeecCCCChHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHhhhccCC
Q 040826 112 EGLSRVRHPNLVCLFGCCVEG-----GEQYLVYEFCAAGNLAQHLLR---KDSVLTWERRVKILRDCALALRYLHHYIDG 183 (347)
Q Consensus 112 ~~l~~l~h~niv~~~~~~~~~-----~~~~lv~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~ 183 (347)
..+-.+-|.|+++++.++.+. .+..++.||+..|++..+|++ .+..+......+|+.||..||.|||+. ..
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~P 197 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-DP 197 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-CC
Confidence 345555799999999988753 357899999999999999965 345688888999999999999999975 78
Q ss_pred CceeCCCCCCCEEecCCCceEEeecccceecCC----CccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHH
Q 040826 184 CIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM----EESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLL 259 (347)
Q Consensus 184 ~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~----~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~ll 259 (347)
.++|+++.-+.|++..+|-+|++-- ....... ..........+.++|.+||.=....-+-++|||+||+-..+|.
T Consensus 198 piihgnlTc~tifiq~ngLIkig~~-ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlema 276 (458)
T KOG1266|consen 198 PIIHGNLTCDTIFIQHNGLIKIGSV-APDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMA 276 (458)
T ss_pred ccccCCcchhheeecCCceEEeccc-CccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHH
Confidence 9999999999999999988887532 2111111 1111223345678999999877777778999999999999998
Q ss_pred hCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 040826 260 SGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEE 333 (347)
Q Consensus 260 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~ 333 (347)
-+.............-... ...+....++.-++. +..|++..|..||+|++++.+
T Consensus 277 ilEiq~tnseS~~~~ee~i-------a~~i~~len~lqr~~------------i~kcl~~eP~~rp~ar~llfH 331 (458)
T KOG1266|consen 277 ILEIQSTNSESKVEVEENI-------ANVIIGLENGLQRGS------------ITKCLEGEPNGRPDARLLLFH 331 (458)
T ss_pred HheeccCCCcceeehhhhh-------hhheeeccCccccCc------------CcccccCCCCCCcchhhhhcC
Confidence 8764322111100000111 111222233332223 334999999999999987653
No 438
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.49 E-value=7.8e-14 Score=127.54 Aligned_cols=243 Identities=24% Similarity=0.245 Sum_probs=180.1
Q ss_pred cccCCeeee--cCCeeEEEEEe---CCCCEEEEEEcccC----CChhHHHHHHHHhhcCC-CCcceeeeeEEEeCCeEEE
Q 040826 68 DWDRRFLGR--GSAGLVYKGVL---PSGQVVAIKHIYKS----NNTDSFSREVEGLSRVR-HPNLVCLFGCCVEGGEQYL 137 (347)
Q Consensus 68 ~~~~~~lg~--G~~g~V~~~~~---~~~~~vavK~~~~~----~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~l 137 (347)
+.....+|. |.+|.+|.+.. .++..+|+|+-... .....-.+|......++ |+|.++.+..+...+..++
T Consensus 116 ~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfi 195 (524)
T KOG0601|consen 116 FPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFI 195 (524)
T ss_pred cccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCccee
Confidence 444567999 99999999985 35778899874332 22233345666666664 9999998888899999999
Q ss_pred EEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHH----HHHHhhhccCCCceeCCCCCCCEEecCC-CceEEeecccce
Q 040826 138 VYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCAL----ALRYLHHYIDGCIVHRDIKLTNILLTEK-LEPKLSDFGLAK 212 (347)
Q Consensus 138 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~----~l~~Lh~~~~~~i~H~dl~p~Nili~~~-~~~kl~dfg~~~ 212 (347)
-+|.+.. +|.++.......++...++..+.+..+ |+.++| ..+++|.|++|.||+...+ ...+++|||+..
T Consensus 196 qtE~~~~-sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~h---s~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~ 271 (524)
T KOG0601|consen 196 QTELCGE-SLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLH---SNNIVHDDLKPANIFTTSDWTSCKLTDFGLVS 271 (524)
T ss_pred eeccccc-hhHHhhhcccccCCchhhhhHHhhhhhcccccccccC---CCcccccccchhheecccccceeecCCcceeE
Confidence 9999964 898888776666888888888888888 999999 8999999999999999999 889999999998
Q ss_pred ecCCCccc----eeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhh-hhHHHHHHhhhcCCCC
Q 040826 213 MLGMEESK----VFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDA-RDQLTRKARDVSMGKR 287 (347)
Q Consensus 213 ~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~-~~~~~~~~~~~~~~~~ 287 (347)
.++..... ......+...|++||...+ -++...|+|++|.++.+..++..++..+... ..+ ...+
T Consensus 272 ~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~-------~r~~-- 341 (524)
T KOG0601|consen 272 KISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQ-------LRQG-- 341 (524)
T ss_pred EccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCCCCccc-------cccc--
Confidence 87654321 1223367889999998876 4677999999999999999988766533111 010 0000
Q ss_pred CcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 040826 288 PIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYE 332 (347)
Q Consensus 288 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~ 332 (347)
.+..++......++..++..+++.+|..|++.+.+..
T Consensus 342 --------~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 342 --------YIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred --------cCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 0111111122235666888899999999999887654
No 439
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.48 E-value=2.4e-13 Score=110.07 Aligned_cols=126 Identities=19% Similarity=0.135 Sum_probs=94.8
Q ss_pred CeeeecCCeeEEEEEeCCCCEEEEEEcccCC-ChhHHHHHHHHhhcCCCCccee-eeeEEEeCCeEEEEEeecCCCChHH
Q 040826 72 RFLGRGSAGLVYKGVLPSGQVVAIKHIYKSN-NTDSFSREVEGLSRVRHPNLVC-LFGCCVEGGEQYLVYEFCAAGNLAQ 149 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~h~niv~-~~~~~~~~~~~~lv~e~~~~gsL~~ 149 (347)
+.++.|.++.||++... |..+++|...... ....+..|...++.+.+.++++ ++.+ ..+..++||||++|.++.+
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~--~~~~~~lv~e~i~G~~l~~ 80 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYF--DPETGVLITEFIEGSELLT 80 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEE--eCCCCeEEEEecCCCcccc
Confidence 56889999999999974 7789999876553 2345678999999886555443 4433 2334579999999988764
Q ss_pred HhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCC-----ceeCCCCCCCEEecCCCceEEeeccccee
Q 040826 150 HLLRKDSVLTWERRVKILRDCALALRYLHHYIDGC-----IVHRDIKLTNILLTEKLEPKLSDFGLAKM 213 (347)
Q Consensus 150 ~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~-----i~H~dl~p~Nili~~~~~~kl~dfg~~~~ 213 (347)
. . ......+.+++++++.|| ..+ ++|+|++|.||+++ ++.++++||+.+..
T Consensus 81 ~-----~----~~~~~~~~~l~~~l~~LH---~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 81 E-----D----FSDPENLEKIAKLLKKLH---SSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred c-----c----ccCHHHHHHHHHHHHHHh---CCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 2 0 111345678999999999 555 59999999999999 66899999998764
No 440
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.46 E-value=1.6e-12 Score=120.28 Aligned_cols=164 Identities=24% Similarity=0.284 Sum_probs=124.4
Q ss_pred eCCCCEEEEEEcccCCC--hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCCCChHHHhhcCCCCCCHHHHH
Q 040826 87 LPSGQVVAIKHIYKSNN--TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRV 164 (347)
Q Consensus 87 ~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~ 164 (347)
..++.+|.|........ .+...+.+..|+.++||||++++..++.++..|+|+|-+. .|..++.+.+ .....
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~----~~~v~ 107 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKELG----KEEVC 107 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHhH----HHHHH
Confidence 44678888877765544 4457788899999999999999999999999999999874 6666665432 44555
Q ss_pred HHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeecccCCCCccccccccCCccCC
Q 040826 165 KILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTC 244 (347)
Q Consensus 165 ~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ 244 (347)
-.+.||+.||.|||+ ..+++|+++.-..|+++..|..||++|.++....... ........--.|..|+.+.... -
T Consensus 108 ~Gl~qIl~AL~FL~~--d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~-~~~~~~~~~~s~~~P~~~~~s~--~ 182 (690)
T KOG1243|consen 108 LGLFQILAALSFLND--DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFN-APAKSLYLIESFDDPEEIDPSE--W 182 (690)
T ss_pred HHHHHHHHHHHHHhc--cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCC-cccccchhhhcccChhhcCccc--c
Confidence 578999999999987 5689999999999999999999999998776532111 1111222233456666554333 3
Q ss_pred cccHHHHHHHHHHHHhC
Q 040826 245 ASDIYSFGIVALQLLSG 261 (347)
Q Consensus 245 ~~Dv~slG~il~~lltg 261 (347)
..|.|.||+++++++.|
T Consensus 183 s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 183 SIDSWGLGCLIEELFNG 199 (690)
T ss_pred chhhhhHHHHHHHHhCc
Confidence 57999999999999999
No 441
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.39 E-value=5.3e-12 Score=99.17 Aligned_cols=140 Identities=22% Similarity=0.301 Sum_probs=105.7
Q ss_pred cCCeeeecCCeeEEEEEeCCCCEEEEEEcccCC----------ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEE
Q 040826 70 DRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSN----------NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVY 139 (347)
Q Consensus 70 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~----------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 139 (347)
...++.+|+-+.|+++.+ .|+...||.-.+.. ......+|...+.++.--.|.-..-++.+...-.++|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 346789999999999999 57877777554432 1235678999998886545554444556666778999
Q ss_pred eecCC-CChHHHhhcCCCC-CCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCc---eEEeeccccee
Q 040826 140 EFCAA-GNLAQHLLRKDSV-LTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLE---PKLSDFGLAKM 213 (347)
Q Consensus 140 e~~~~-gsL~~~l~~~~~~-~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~---~kl~dfg~~~~ 213 (347)
||++| .++.+++...... ........+++++=+.+.-|| .++++|+||..+||++..++. +.++|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH---~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLH---DNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhh---hCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 99987 4788888654332 333334788999999999999 899999999999999986653 58999999875
No 442
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.33 E-value=1.5e-10 Score=102.04 Aligned_cols=259 Identities=15% Similarity=0.126 Sum_probs=159.4
Q ss_pred CCeeeecCCeeEEEEEeCCCCEEEEEEcccCCChhHHHHHHHHhhcCCCCccee--------eeeEEEeCCeEEEEEeec
Q 040826 71 RRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVC--------LFGCCVEGGEQYLVYEFC 142 (347)
Q Consensus 71 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~h~niv~--------~~~~~~~~~~~~lv~e~~ 142 (347)
.+.||+|+-+.+|-.---.+ .+-|++....-......-..+...-.||-+.. ++|- ..+....++|+..
T Consensus 16 gr~LgqGgea~ly~l~e~~d--~VAKIYh~Pppa~~aqk~a~la~~p~~p~~~~rvaWPqa~L~G~-~~~~~iGflmP~v 92 (637)
T COG4248 16 GRPLGQGGEADLYTLGEVRD--QVAKIYHAPPPAAQAQKVAELAATPDAPLLNYRVAWPQATLHGG-RRGKVIGFLMPKV 92 (637)
T ss_pred CccccCCccceeeecchhhc--hhheeecCCCchHHHHHHHHhccCCCCcchhhhhcccHHHhhCC-CccceeEEecccC
Confidence 46799999999986542122 24566655433322111111222223543222 1111 1122367788888
Q ss_pred CCC-ChHHHhh-----cCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCC
Q 040826 143 AAG-NLAQHLL-----RKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGM 216 (347)
Q Consensus 143 ~~g-sL~~~l~-----~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 216 (347)
.+. ...+++. ++-....|.-.++.++.++.+.+.|| ..|.+-+|.+++|+|+.+++.++|.|-..-...
T Consensus 93 ~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH---~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~-- 167 (637)
T COG4248 93 SGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLH---EHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQIN-- 167 (637)
T ss_pred CCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHH---hcCCcccccCccceeeecCceEEEEcccceeec--
Confidence 765 2333331 23356899999999999999999999 889999999999999999999999986544432
Q ss_pred CccceeecccCCCCcccccccc-----CCccCCcccHHHHHHHHHHHHhC-CCCcCCChhhhhHHHHHHhhhcCCCCCcc
Q 040826 217 EESKVFTDVRGTIGYMDPEYMT-----NAKLTCASDIYSFGIVALQLLSG-QKVIELDFDARDQLTRKARDVSMGKRPIK 290 (347)
Q Consensus 217 ~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~il~~lltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (347)
......-..+|...|.+||... +..-+..+|.|.||+++++++.| ++||.+-....+...-...++..+.-.+.
T Consensus 168 ~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya 247 (637)
T COG4248 168 ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYA 247 (637)
T ss_pred cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeec
Confidence 2344455667999999999765 34566789999999999999887 88887421110000000001111110000
Q ss_pred cccC----CCCCCCCCHHHHHHHHHHHHHhccC--CCCCCCCHHHHHHHHHHH
Q 040826 291 DFED----PRLNGNINRADFESILKIAVLCVAK--SSKGRPTIDVVYEEIDKA 337 (347)
Q Consensus 291 ~~~~----~~l~~~~~~~~~~~l~~l~~~cl~~--~p~~Rps~~ei~~~l~~~ 337 (347)
.... |.-...--...+.++..|..+|+.. ++.-|||.+-.+..|..+
T Consensus 248 ~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al 300 (637)
T COG4248 248 SDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDAL 300 (637)
T ss_pred hhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHH
Confidence 0000 0000011122346788899999876 467899999999988877
No 443
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.33 E-value=1.7e-11 Score=103.62 Aligned_cols=140 Identities=24% Similarity=0.307 Sum_probs=107.7
Q ss_pred CeeeecCCeeEEEEEeCCCCEEEEEEcccCC---ChhHHHHHHHHhhcCCCC--cceeeeeEEEeC---CeEEEEEeecC
Q 040826 72 RFLGRGSAGLVYKGVLPSGQVVAIKHIYKSN---NTDSFSREVEGLSRVRHP--NLVCLFGCCVEG---GEQYLVYEFCA 143 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~---~~~~~~~e~~~l~~l~h~--niv~~~~~~~~~---~~~~lv~e~~~ 143 (347)
+.|+.|.++.+|++...+|..+++|...... ....+.+|.++++.+.+. ++.+++.+.... +..+++|||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 5689999999999998777899999886643 345788999999999753 356666665543 25689999999
Q ss_pred CCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhcc------------------------------------------
Q 040826 144 AGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYI------------------------------------------ 181 (347)
Q Consensus 144 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~------------------------------------------ 181 (347)
|.++.+.+.. ..++......++.++++++..||+..
T Consensus 84 G~~l~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (223)
T cd05154 84 GRVLRDRLLR--PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLL 161 (223)
T ss_pred CEecCCCCCC--CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHH
Confidence 9888765422 34677777778888888888888421
Q ss_pred -----------CCCceeCCCCCCCEEecC--CCceEEeeccccee
Q 040826 182 -----------DGCIVHRDIKLTNILLTE--KLEPKLSDFGLAKM 213 (347)
Q Consensus 182 -----------~~~i~H~dl~p~Nili~~--~~~~kl~dfg~~~~ 213 (347)
...++|+|++|.||+++. ++.+.++||+.+..
T Consensus 162 ~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 162 RWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 235799999999999998 56689999988764
No 444
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.31 E-value=5e-11 Score=97.34 Aligned_cols=135 Identities=19% Similarity=0.149 Sum_probs=96.3
Q ss_pred CeeeecCCeeEEEEEeCC-------CCEEEEEEcccCC-----------------------C-hhH----HHHHHHHhhc
Q 040826 72 RFLGRGSAGLVYKGVLPS-------GQVVAIKHIYKSN-----------------------N-TDS----FSREVEGLSR 116 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~~-------~~~vavK~~~~~~-----------------------~-~~~----~~~e~~~l~~ 116 (347)
..||.|--+.||.|...+ +..+|+|...... + ... ..+|...|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999998543 4789999774320 0 011 2278888888
Q ss_pred CCC--CcceeeeeEEEeCCeEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHh-hhccCCCceeCCCCCC
Q 040826 117 VRH--PNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYL-HHYIDGCIVHRDIKLT 193 (347)
Q Consensus 117 l~h--~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~L-h~~~~~~i~H~dl~p~ 193 (347)
+.. -++..++++ ..-++||||+.+..+..-.. ....++......+..+++.++..+ | ..|++|+||++.
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~L-kd~~~~~~~~~~i~~~i~~~l~~l~H---~~glVHGDLs~~ 154 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKL-KDAKLNDEEMKNAYYQVLSMMKQLYK---ECNLVHADLSEY 154 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhh-hccccCHHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHH
Confidence 853 345555543 45689999997643322111 122345566677889999999998 7 789999999999
Q ss_pred CEEecCCCceEEeecccceecC
Q 040826 194 NILLTEKLEPKLSDFGLAKMLG 215 (347)
Q Consensus 194 Nili~~~~~~kl~dfg~~~~~~ 215 (347)
||+++ ++.+.++|||.+....
T Consensus 155 NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 155 NMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred HEEEE-CCcEEEEECCCceeCC
Confidence 99997 4689999999887653
No 445
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.29 E-value=3.9e-11 Score=94.79 Aligned_cols=128 Identities=23% Similarity=0.350 Sum_probs=96.1
Q ss_pred eeeecCCeeEEEEEeCCCCEEEEEEcccCC--C--------hhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeec
Q 040826 73 FLGRGSAGLVYKGVLPSGQVVAIKHIYKSN--N--------TDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFC 142 (347)
Q Consensus 73 ~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~--------~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 142 (347)
.+++|+-+.++.+.+. |..+++|.-.+.. . .....+|..++.++.--.+....=+..+.....++|||+
T Consensus 3 ~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I 81 (204)
T COG3642 3 LIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI 81 (204)
T ss_pred hhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence 5789999999999874 3446666443321 1 124667888888886444444444445666778999999
Q ss_pred CCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeeccccee
Q 040826 143 AAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKM 213 (347)
Q Consensus 143 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~ 213 (347)
+|..|.+.+... ...++..+=.-+.-|| ..||+|+||+++||++..++ +.++|||++..
T Consensus 82 ~G~~lkd~l~~~--------~~~~~r~vG~~vg~lH---~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 82 EGELLKDALEEA--------RPDLLREVGRLVGKLH---KAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred CChhHHHHHHhc--------chHHHHHHHHHHHHHH---hcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 998888888544 2456777778889999 89999999999999999775 99999999875
No 446
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=99.25 E-value=5.5e-10 Score=104.12 Aligned_cols=139 Identities=22% Similarity=0.224 Sum_probs=94.7
Q ss_pred CCeeeecCCeeEEEEEeCCCCEEEEEEcccCCChh------------------------------------------HHH
Q 040826 71 RRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTD------------------------------------------SFS 108 (347)
Q Consensus 71 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~------------------------------------------~~~ 108 (347)
.++++.++-|+||+|++++|+.||||+.+++-... ++.
T Consensus 130 ~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 130 PEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CCchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 47899999999999999999999999987651100 244
Q ss_pred HHHHHhhcCC-----CCcceeeeeEE-EeCCeEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccC
Q 040826 109 REVEGLSRVR-----HPNLVCLFGCC-VEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYID 182 (347)
Q Consensus 109 ~e~~~l~~l~-----h~niv~~~~~~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~ 182 (347)
+|...+.++. .++ +.+=.++ +-.+...|+|||++|..+.+.........+...+.....++.--.-+ .
T Consensus 210 ~EA~n~~~~~~nf~~~~~-v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f~~q~~-----~ 283 (517)
T COG0661 210 REAANAERFRENFKDDPD-VYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAFLRQLL-----R 283 (517)
T ss_pred HHHHHHHHHHHHcCCCCC-eEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHHHHHHH-----h
Confidence 5555555442 233 2332333 33567789999999998888753333334543333333222211112 4
Q ss_pred CCceeCCCCCCCEEecCCCceEEeecccceecC
Q 040826 183 GCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLG 215 (347)
Q Consensus 183 ~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 215 (347)
.|++|.|.+|.||+++.+|.+.+.|||+.....
T Consensus 284 dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~ 316 (517)
T COG0661 284 DGFFHADPHPGNILVRSDGRIVLLDFGIVGRLD 316 (517)
T ss_pred cCccccCCCccceEEecCCcEEEEcCcceecCC
Confidence 589999999999999999999999999987653
No 447
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.22 E-value=4.2e-12 Score=116.37 Aligned_cols=245 Identities=18% Similarity=0.191 Sum_probs=170.9
Q ss_pred HHhcCcccCCeeeecCCeeEEEEEe--CCCCEEEEEEcccCCCh----hHHHHHHHHhhcC-CCCcceeeeeEEEeCCeE
Q 040826 63 NAINNDWDRRFLGRGSAGLVYKGVL--PSGQVVAIKHIYKSNNT----DSFSREVEGLSRV-RHPNLVCLFGCCVEGGEQ 135 (347)
Q Consensus 63 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~~vavK~~~~~~~~----~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 135 (347)
....+|.....||.|.|+.|+.... .++..+++|.+.+.... ..-..|+.+...+ .|.++++....+......
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~ 341 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQG 341 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccc
Confidence 3456788888999999999999874 36778999877654321 1223455555555 477888877777766777
Q ss_pred EEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCC-CceEEeecccceec
Q 040826 136 YLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEK-LEPKLSDFGLAKML 214 (347)
Q Consensus 136 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~-~~~kl~dfg~~~~~ 214 (347)
++=.||++++++.... .....+.+...+++..|++.++.++| +..++|+|++|+||++..+ +..+++|||.+..+
T Consensus 342 ~ip~e~~~~~s~~l~~-~~~~~~d~~~~~~~~~q~~~~l~~i~---s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~ 417 (524)
T KOG0601|consen 342 YIPLEFCEGGSSSLRS-VTSQMLDEDPRLRLTAQILTALNVIH---SKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRL 417 (524)
T ss_pred cCchhhhcCcchhhhh-HHHHhcCcchhhhhHHHHHhcccccc---chhhhcccccccceeeccchhhhhcccccccccc
Confidence 7999999999887665 23345777788899999999999999 8899999999999999986 78899999988642
Q ss_pred CCCccceeecccCCCCcc--ccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccc
Q 040826 215 GMEESKVFTDVRGTIGYM--DPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDF 292 (347)
Q Consensus 215 ~~~~~~~~~~~~~~~~y~--aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (347)
... .....+.-+++ +|+......+..+.|++|||..+.+.+++........ .+..+..+..
T Consensus 418 ~~~----~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~--------~~~~i~~~~~----- 480 (524)
T KOG0601|consen 418 AFS----SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV--------QSLTIRSGDT----- 480 (524)
T ss_pred cee----cccccccccccccchhhccccccccccccccccccccccccCcccCcccc--------cceeeecccc-----
Confidence 111 11112333444 5555567788899999999999999999876433110 0111111211
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 040826 293 EDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEID 335 (347)
Q Consensus 293 ~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l~ 335 (347)
+.+. .....+..+...+...++..||++.+.....+
T Consensus 481 --p~~~-----~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~ 516 (524)
T KOG0601|consen 481 --PNLP-----GLKLQLQVLLKVMINPDRKRRPSAVELSLHSE 516 (524)
T ss_pred --cCCC-----chHHhhhhhhhhhcCCccccchhhhhhcccch
Confidence 1111 11145667777788899999999988766544
No 448
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.21 E-value=1.6e-09 Score=98.00 Aligned_cols=212 Identities=17% Similarity=0.225 Sum_probs=149.9
Q ss_pred CCeeEEEEEe-CCCCEEEEEEcccCCC--hhHHHHHHHHhhcCCCCcceeeeeEEEe----CCeEEEEEeecCC-CChHH
Q 040826 78 SAGLVYKGVL-PSGQVVAIKHIYKSNN--TDSFSREVEGLSRVRHPNLVCLFGCCVE----GGEQYLVYEFCAA-GNLAQ 149 (347)
Q Consensus 78 ~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~~~-gsL~~ 149 (347)
...+.|++.. -+|..|++|+++.... ......-++.++++.|+|+|++.+++.. +...++||+|.++ ++|.+
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d 367 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD 367 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence 4567899984 4899999999954432 2234456789999999999999998763 4578999999986 47888
Q ss_pred HhhcC--------------CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecC
Q 040826 150 HLLRK--------------DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLG 215 (347)
Q Consensus 150 ~l~~~--------------~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 215 (347)
+.... +...++..+|.++.|+..||.++| +.|+.-+-|.|.+|+++.+.+++|+..|....+.
T Consensus 368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIH---ssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~ 444 (655)
T KOG3741|consen 368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIH---SSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQ 444 (655)
T ss_pred HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHH---hcCceeecccHhHeEeeCcceEEEecccceeeec
Confidence 66431 234778899999999999999999 8899999999999999999999999998877654
Q ss_pred CCccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCC-ChhhhhHHHHHHhhhcCCCCCcccccC
Q 040826 216 MEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIEL-DFDARDQLTRKARDVSMGKRPIKDFED 294 (347)
Q Consensus 216 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (347)
.++. +.+.+ -.+-|.=.||.+++.|.||..--.. +..... ..+
T Consensus 445 ~d~~---------------~~le~---~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s----~~~-------------- 488 (655)
T KOG3741|consen 445 EDPT---------------EPLES---QQQNDLRDLGLLLLALATGTENSNRTDSTQSS----HLT-------------- 488 (655)
T ss_pred CCCC---------------cchhH---HhhhhHHHHHHHHHHHhhcccccccccchHHH----HHH--------------
Confidence 3321 11111 1367888999999999999532110 000000 011
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 040826 295 PRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEI 334 (347)
Q Consensus 295 ~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l 334 (347)
.+......++++++......++++ -++.+++..+
T Consensus 489 -----~I~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~~ 522 (655)
T KOG3741|consen 489 -----RITTTYSTDLRNVVEYLESLNFRE-KSIQDLLPMI 522 (655)
T ss_pred -----HhhhhhhHHHHHHHHHHHhcCccc-ccHHHHHHHH
Confidence 112233356777777777777776 6666665543
No 449
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.12 E-value=2e-09 Score=92.86 Aligned_cols=138 Identities=15% Similarity=0.114 Sum_probs=98.6
Q ss_pred CeeeecCCeeEEEEEeCCCCEEEEEEcccCCCh-------------hHHHHHHHHhhcCCCCc--ceeeeeEEEe-----
Q 040826 72 RFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNNT-------------DSFSREVEGLSRVRHPN--LVCLFGCCVE----- 131 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-------------~~~~~e~~~l~~l~h~n--iv~~~~~~~~----- 131 (347)
+.+-......|.+..+ +|+.+.+|........ ..+.+|...+.++...+ ...++++...
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 3344444445667666 6788999977443311 13778888888874322 2334444432
Q ss_pred CCeEEEEEeecCCC-ChHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecC-------CCc
Q 040826 132 GGEQYLVYEFCAAG-NLAQHLLRK-DSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTE-------KLE 202 (347)
Q Consensus 132 ~~~~~lv~e~~~~g-sL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~-------~~~ 202 (347)
....++|+|++++. +|.+++... ....+......++.+++..+.-|| ..|++|+|++++|||++. +..
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH---~~Gi~HgDL~~~NiLl~~~~~~~~~~~~ 183 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMH---AAGINHRDCYICHFLLHLPFPGREEDLK 183 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCccCCCChhhEEEeccccCCCCCce
Confidence 23578999999985 788887532 234566777889999999999999 899999999999999975 468
Q ss_pred eEEeeccccee
Q 040826 203 PKLSDFGLAKM 213 (347)
Q Consensus 203 ~kl~dfg~~~~ 213 (347)
+.++||+.+..
T Consensus 184 ~~LIDl~r~~~ 194 (268)
T PRK15123 184 LSVIDLHRAQI 194 (268)
T ss_pred EEEEECCcccc
Confidence 99999998753
No 450
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.09 E-value=4.4e-11 Score=115.79 Aligned_cols=244 Identities=19% Similarity=0.193 Sum_probs=158.9
Q ss_pred CcccCCeeeecCCeeEEEEEe-CCCCEEEEEEcccC-----CChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEe
Q 040826 67 NDWDRRFLGRGSAGLVYKGVL-PSGQVVAIKHIYKS-----NNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYE 140 (347)
Q Consensus 67 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 140 (347)
++...+.+-+|.++.++.+.- .+|...+.|..... ...+....+-.++-.-++|-++...--+......+|+++
T Consensus 805 ~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~~ 884 (1205)
T KOG0606|consen 805 GFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLVGH 884 (1205)
T ss_pred cceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchhhH
Confidence 444445677899999988772 23422222222111 111122222222222334555544444445667899999
Q ss_pred ecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCC---
Q 040826 141 FCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGME--- 217 (347)
Q Consensus 141 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~--- 217 (347)
|..+++|...++..+ ..+....+-....+.+++++|| ...+.|+|++|.|.++..++..+++|||.......-
T Consensus 885 ~~~~~~~~Skl~~~~-~~saepaRs~i~~~vqs~e~L~---s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~ 960 (1205)
T KOG0606|consen 885 YLNGGDLPSKLHNSG-CLSAEPARSPILERVQSLESLH---SSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPT 960 (1205)
T ss_pred HhccCCchhhhhcCC-CcccccccchhHHHHhhhhccc---cchhhcccccccchhhcccCCcccCccccccccccccCc
Confidence 999999998886544 3455555566677889999999 677899999999999999999999999733321100
Q ss_pred ---------------------------ccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHHhCCCCcCCChh
Q 040826 218 ---------------------------ESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIELDFD 270 (347)
Q Consensus 218 ---------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~ 270 (347)
+........+|..|.+||...+......+|+|++|+.+++.++|.+||.....
T Consensus 961 ~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tp 1040 (1205)
T KOG0606|consen 961 TDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETP 1040 (1205)
T ss_pred CCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcch
Confidence 00112224589999999999999989999999999999999999999985543
Q ss_pred hhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHH
Q 040826 271 ARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTID 328 (347)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ 328 (347)
. ...+.+..+..+.. ....+...+..+++...+..+|.+|-.+.
T Consensus 1041 q-----~~f~ni~~~~~~~p---------~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1041 Q-----QIFENILNRDIPWP---------EGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred h-----hhhhccccCCCCCC---------CCccccChhhhhhhhhhhccCchhccCcc
Confidence 3 22233322221111 12223345677888888889999997665
No 451
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.07 E-value=1.5e-09 Score=88.38 Aligned_cols=123 Identities=24% Similarity=0.283 Sum_probs=80.4
Q ss_pred eEEEEEeCCCCEEEEEEcccCC--------------C--------------hhHHHHHHHHhhcCCCC--cceeeeeEEE
Q 040826 81 LVYKGVLPSGQVVAIKHIYKSN--------------N--------------TDSFSREVEGLSRVRHP--NLVCLFGCCV 130 (347)
Q Consensus 81 ~V~~~~~~~~~~vavK~~~~~~--------------~--------------~~~~~~e~~~l~~l~h~--niv~~~~~~~ 130 (347)
.||.|...+|..+|+|...... . .....+|.+.|.++..- ++.+++.+.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 4899999899999999874320 0 01356799999999755 455555442
Q ss_pred eCCeEEEEEeecC--CCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHH-hhhccCCCceeCCCCCCCEEecCCCceEEee
Q 040826 131 EGGEQYLVYEFCA--AGNLAQHLLRKDSVLTWERRVKILRDCALALRY-LHHYIDGCIVHRDIKLTNILLTEKLEPKLSD 207 (347)
Q Consensus 131 ~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~-Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~d 207 (347)
.-.+||||++ |..+..+.... ++......++.+++..+.. +| ..|++|+||++.||+++++ .+.++|
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~---~~~~~~~~~~~~il~~~~~~~~---~~givHGDLs~~NIlv~~~-~~~iID 149 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD---LSPEEPKELLEEILEEIIKMLH---KAGIVHGDLSEYNILVDDG-KVYIID 149 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG---GGGSTHHHHHHHHHHHHHHHHH---CTTEEESS-STTSEEEETT-CEEE--
T ss_pred ---CCEEEEEecCCCccchhhHHhcc---ccchhHHHHHHHHHHHHHHHHH---hcCceecCCChhhEEeecc-eEEEEe
Confidence 3469999998 64454432211 1133455677777775555 56 8899999999999999988 999999
Q ss_pred cccceec
Q 040826 208 FGLAKML 214 (347)
Q Consensus 208 fg~~~~~ 214 (347)
||.+...
T Consensus 150 f~qav~~ 156 (188)
T PF01163_consen 150 FGQAVDS 156 (188)
T ss_dssp GTTEEET
T ss_pred cCcceec
Confidence 9988764
No 452
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=99.01 E-value=3.7e-09 Score=98.31 Aligned_cols=141 Identities=18% Similarity=0.169 Sum_probs=93.2
Q ss_pred cCCeeeecCCeeEEEEEeCCCCEEEEEEcccCCChh---------------------------------------HHHHH
Q 040826 70 DRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTD---------------------------------------SFSRE 110 (347)
Q Consensus 70 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~---------------------------------------~~~~e 110 (347)
..+.||..+.|+||+|++++|+.||||+.++.-... +|.+|
T Consensus 165 ~~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~E 244 (538)
T KOG1235|consen 165 DEEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKE 244 (538)
T ss_pred CcchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHH
Confidence 346899999999999999999999999987651110 24455
Q ss_pred HHHhhcC----CCCc---ceeeeeEEE-eCCeEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccC
Q 040826 111 VEGLSRV----RHPN---LVCLFGCCV-EGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYID 182 (347)
Q Consensus 111 ~~~l~~l----~h~n---iv~~~~~~~-~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~ 182 (347)
.+...+. .|-+ -+.+=.++. -.+...|+|||++|..+.|.-.-....++...+..-+.+.. +++...
T Consensus 245 A~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~-----~~qIf~ 319 (538)
T KOG1235|consen 245 AKNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAY-----LEQIFK 319 (538)
T ss_pred HHhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHH-----HHHHHh
Confidence 5444333 2434 111222222 24578899999999977765432223355554444333332 222224
Q ss_pred CCceeCCCCCCCEEecC----CCceEEeecccceecC
Q 040826 183 GCIVHRDIKLTNILLTE----KLEPKLSDFGLAKMLG 215 (347)
Q Consensus 183 ~~i~H~dl~p~Nili~~----~~~~kl~dfg~~~~~~ 215 (347)
.|++|+|-+|.||+++. ++.+.+-|||+.....
T Consensus 320 ~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is 356 (538)
T KOG1235|consen 320 TGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVIS 356 (538)
T ss_pred cCCccCCCCCCcEEEecCCCCCccEEEEccccccccc
Confidence 58999999999999994 6789999999988654
No 453
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.96 E-value=5.4e-09 Score=87.73 Aligned_cols=131 Identities=25% Similarity=0.233 Sum_probs=94.4
Q ss_pred cCCeeeecCCeeEEEEEeCCCCEEEEEEcccC----------CC--------------hhHHHHHHHHhhcCCCC--cce
Q 040826 70 DRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKS----------NN--------------TDSFSREVEGLSRVRHP--NLV 123 (347)
Q Consensus 70 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~----------~~--------------~~~~~~e~~~l~~l~h~--niv 123 (347)
...+||-|--+.||.|..++|..+++|.=.-. .+ .....+|.+.|.++... .+.
T Consensus 95 iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~VP 174 (304)
T COG0478 95 IGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKVP 174 (304)
T ss_pred hccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCCC
Confidence 45789999999999999999999999953211 00 11356888999998644 555
Q ss_pred eeeeEEEeCCeEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCce
Q 040826 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP 203 (347)
Q Consensus 124 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~ 203 (347)
+.+++ +..++|||+++|-.|...- +.......++..+++-+..+- ..|++|+|+++-||+++++|.+
T Consensus 175 ~P~~~----nRHaVvMe~ieG~eL~~~r------~~~en~~~il~~il~~~~~~~---~~GiVHGDlSefNIlV~~dg~~ 241 (304)
T COG0478 175 KPIAW----NRHAVVMEYIEGVELYRLR------LDVENPDEILDKILEEVRKAY---RRGIVHGDLSEFNILVTEDGDI 241 (304)
T ss_pred Ccccc----ccceeeeehcccceeeccc------CcccCHHHHHHHHHHHHHHHH---HcCccccCCchheEEEecCCCE
Confidence 55543 4668999999996665422 123333444555555555555 5789999999999999999999
Q ss_pred EEeeccccee
Q 040826 204 KLSDFGLAKM 213 (347)
Q Consensus 204 kl~dfg~~~~ 213 (347)
.++||--+..
T Consensus 242 ~vIDwPQ~v~ 251 (304)
T COG0478 242 VVIDWPQAVP 251 (304)
T ss_pred EEEeCccccc
Confidence 9999965554
No 454
>PRK09902 hypothetical protein; Provisional
Probab=98.94 E-value=2.6e-08 Score=81.60 Aligned_cols=135 Identities=17% Similarity=0.116 Sum_probs=101.5
Q ss_pred eeecCCeeEEEEEeCCCCEEEEEEccc--------CCChhHHHHHHHHhhcCCCC--cceeeeeEEE-e----CCeEEEE
Q 040826 74 LGRGSAGLVYKGVLPSGQVVAIKHIYK--------SNNTDSFSREVEGLSRVRHP--NLVCLFGCCV-E----GGEQYLV 138 (347)
Q Consensus 74 lg~G~~g~V~~~~~~~~~~vavK~~~~--------~~~~~~~~~e~~~l~~l~h~--niv~~~~~~~-~----~~~~~lv 138 (347)
-|+||.+.|+.... +|..+-+|.-.. +.....|.+|...+.++..- .+.++. ++. . ....+||
T Consensus 26 ~~rgG~SgV~r~~~-~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVER-NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEe-CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 57799999999877 455788887642 23456899999999988522 234443 222 1 2246899
Q ss_pred EeecCC-CChHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCc--eEEeeccccee
Q 040826 139 YEFCAA-GNLAQHLLRKD-SVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLE--PKLSDFGLAKM 213 (347)
Q Consensus 139 ~e~~~~-gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~--~kl~dfg~~~~ 213 (347)
+|-+++ .+|.+++.+.. .+.+......++.+++..+.-|| ..|+.|+|+.+.||+++.++. ++++||.-++.
T Consensus 104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH---~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMH---SVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 998764 48888875432 35677788899999999999999 899999999999999986667 99999976554
No 455
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.92 E-value=7.6e-10 Score=103.31 Aligned_cols=151 Identities=21% Similarity=0.276 Sum_probs=99.5
Q ss_pred HHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCcccee--------ecccCCCCcccccccc
Q 040826 167 LRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVF--------TDVRGTIGYMDPEYMT 238 (347)
Q Consensus 167 ~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~--------~~~~~~~~y~aPE~~~ 238 (347)
+.+++.|+.|+|+ +.+++|+.|.|++|.++.++..|+++|+.+........... .-......|.|||++.
T Consensus 105 l~~v~dgl~flh~--sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 105 LGNVADGLAFLHR--SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hhcccchhhhhcc--CcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 3445599999997 78999999999999999999999999987765432111111 1123567899999999
Q ss_pred CCccCCcccHHHHHHHHHHHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhcc
Q 040826 239 NAKLTCASDIYSFGIVALQLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVA 318 (347)
Q Consensus 239 ~~~~~~~~Dv~slG~il~~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~ 318 (347)
+...+.++|+||+|+++|.+..|..+.......... ......... ...+ .++.+.+.++.+=+.+.+.
T Consensus 183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~---~~~~~~~~~--~~~~-------~~s~~~p~el~~~l~k~l~ 250 (700)
T KOG2137|consen 183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLS---YSFSRNLLN--AGAF-------GYSNNLPSELRESLKKLLN 250 (700)
T ss_pred cccccccccceeeeeEEEEEecCCcchhhccCCcch---hhhhhcccc--cccc-------cccccCcHHHHHHHHHHhc
Confidence 988889999999999999999554433221111111 111111111 0000 1112233456666666999
Q ss_pred CCCCCCCCHHHHH
Q 040826 319 KSSKGRPTIDVVY 331 (347)
Q Consensus 319 ~~p~~Rps~~ei~ 331 (347)
.++..||++.++.
T Consensus 251 ~~~~~rp~~~~l~ 263 (700)
T KOG2137|consen 251 GDSAVRPTLDLLL 263 (700)
T ss_pred CCcccCcchhhhh
Confidence 9999999777664
No 456
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.84 E-value=5.1e-08 Score=81.30 Aligned_cols=107 Identities=24% Similarity=0.241 Sum_probs=82.5
Q ss_pred hhHHHHHHHHhhcCCC--CcceeeeeEEEeC----CeEEEEEeecCCC-ChHHHhhcCCCCCCHHHHHHHHHHHHHHHHH
Q 040826 104 TDSFSREVEGLSRVRH--PNLVCLFGCCVEG----GEQYLVYEFCAAG-NLAQHLLRKDSVLTWERRVKILRDCALALRY 176 (347)
Q Consensus 104 ~~~~~~e~~~l~~l~h--~niv~~~~~~~~~----~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~ 176 (347)
.....+|...+.++.. -...+.+++.... ...++|+|++++. +|.+++..... .+......++.+++..+.-
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~-~~~~~~~~ll~~l~~~i~~ 133 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ-LDPSQRRELLRALARLIAK 133 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc-cchhhHHHHHHHHHHHHHH
Confidence 3457788887777742 2344555555442 2458999999884 78888865333 6667788899999999999
Q ss_pred hhhccCCCceeCCCCCCCEEecCCC---ceEEeecccceec
Q 040826 177 LHHYIDGCIVHRDIKLTNILLTEKL---EPKLSDFGLAKML 214 (347)
Q Consensus 177 Lh~~~~~~i~H~dl~p~Nili~~~~---~~kl~dfg~~~~~ 214 (347)
|| ..|++|+|+++.|||++.++ .+.++||+.+...
T Consensus 134 lH---~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 134 LH---DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HH---HCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 99 89999999999999999887 8999999877653
No 457
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.81 E-value=1.1e-07 Score=80.37 Aligned_cols=138 Identities=17% Similarity=0.214 Sum_probs=86.9
Q ss_pred CeeeecCCeeEEEEEeCCCCEEEEEEcccCCChhHHHHHHHHhhcCCCCc--ceeeeeEEEeCCeEEEEEeecCCCC-hH
Q 040826 72 RFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPN--LVCLFGCCVEGGEQYLVYEFCAAGN-LA 148 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~~~~~lv~e~~~~gs-L~ 148 (347)
.+||+|..+.||+. .|..+++|............+|.+.++.+..-. +.+.+.+....+...++||+++|.+ +.
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~~ 83 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGFDKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSFS 83 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccchh
Confidence 56999999999984 255678898877666667889999998886333 4566777777777889999999963 11
Q ss_pred HHh---------------------hcCC-CCCCHHHHH-HHHHH----------HHH-HHHHhhhc-cCCCceeCCCCCC
Q 040826 149 QHL---------------------LRKD-SVLTWERRV-KILRD----------CAL-ALRYLHHY-IDGCIVHRDIKLT 193 (347)
Q Consensus 149 ~~l---------------------~~~~-~~~~~~~~~-~i~~q----------i~~-~l~~Lh~~-~~~~i~H~dl~p~ 193 (347)
..+ +.-. ......... .+..+ +.+ ...+|... ....++|+|+.|.
T Consensus 84 ~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~~~ 163 (226)
T TIGR02172 84 RIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQIG 163 (226)
T ss_pred hhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCCCC
Confidence 111 1100 011111100 01000 000 11111111 1345789999999
Q ss_pred CEEecCCCceEEeeccccee
Q 040826 194 NILLTEKLEPKLSDFGLAKM 213 (347)
Q Consensus 194 Nili~~~~~~kl~dfg~~~~ 213 (347)
|+++++++ +.++||+.+..
T Consensus 164 Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 164 NLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred cEEEcCCC-cEEEechhcCc
Confidence 99999888 99999987764
No 458
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.68 E-value=3e-07 Score=75.72 Aligned_cols=135 Identities=16% Similarity=0.140 Sum_probs=88.6
Q ss_pred hcCcccCCeeeecCCeeEEEEEeCCCCEEEEEEcccCCCh--h---------HHHHHHHHhhcCC---CCcceeeeeEEE
Q 040826 65 INNDWDRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNNT--D---------SFSREVEGLSRVR---HPNLVCLFGCCV 130 (347)
Q Consensus 65 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~---------~~~~e~~~l~~l~---h~niv~~~~~~~ 130 (347)
..+|...+.+.......|.+... +|..+++|...+.... + ...+.+..+.++. -.....++.+..
T Consensus 30 ~~~~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~e 108 (229)
T PF06176_consen 30 DNNYKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAE 108 (229)
T ss_pred hCCceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeee
Confidence 45566667777777777877777 5788999977653211 1 1334444444442 223333333322
Q ss_pred e-----CCeEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEE
Q 040826 131 E-----GGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKL 205 (347)
Q Consensus 131 ~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl 205 (347)
. ....+++|||++|..|.+... +++ .+...+.+++.-|| ..|+.|+|++|+|++++++ .+++
T Consensus 109 kk~~~~~~~~~ll~EYIeG~~l~d~~~-----i~e----~~~~ki~~~ikqlH---~~G~~HGD~hpgNFlv~~~-~i~i 175 (229)
T PF06176_consen 109 KKIFRYTSSYVLLMEYIEGVELNDIED-----IDE----DLAEKIVEAIKQLH---KHGFYHGDPHPGNFLVSNN-GIRI 175 (229)
T ss_pred eeeccceeEEEEEEEEecCeecccchh-----cCH----HHHHHHHHHHHHHH---HcCCccCCCCcCcEEEECC-cEEE
Confidence 2 235678999999988866431 222 24456778899999 8999999999999999965 5999
Q ss_pred eeccccee
Q 040826 206 SDFGLAKM 213 (347)
Q Consensus 206 ~dfg~~~~ 213 (347)
.||+..+.
T Consensus 176 ID~~~k~~ 183 (229)
T PF06176_consen 176 IDTQGKRM 183 (229)
T ss_pred EECccccc
Confidence 99976553
No 459
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.58 E-value=1.1e-06 Score=73.37 Aligned_cols=153 Identities=22% Similarity=0.263 Sum_probs=102.2
Q ss_pred cccccHHHHHHHhcCcccCCe---eeecCCeeEEEEEeCCCCEEEEEEcccCCC---------------------hhH--
Q 040826 53 LYRFSKDEIENAINNDWDRRF---LGRGSAGLVYKGVLPSGQVVAIKHIYKSNN---------------------TDS-- 106 (347)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~---lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---------------------~~~-- 106 (347)
+...+.+.+..+.++...... |++|--+.||+|...++..+|+|++..... ...
T Consensus 32 ~D~~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv 111 (268)
T COG1718 32 FDKRTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLV 111 (268)
T ss_pred hhhHHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHH
Confidence 344566666666666555544 456777789999988899999998854310 000
Q ss_pred ---HHHHHHHhhcCC--CCcceeeeeEEEeCCeEEEEEeecCCCChH-HHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhc
Q 040826 107 ---FSREVEGLSRVR--HPNLVCLFGCCVEGGEQYLVYEFCAAGNLA-QHLLRKDSVLTWERRVKILRDCALALRYLHHY 180 (347)
Q Consensus 107 ---~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~lv~e~~~~gsL~-~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~ 180 (347)
...|...|+++. +-.+.+.+++.. -.|||||+.....- =.| +.-.+.......+..++++.+.-|-.
T Consensus 112 ~~W~~kEf~NL~R~~eAGVrvP~Pi~~~~----nVLvMEfIg~~g~pAP~L--kDv~~e~~e~~~~~~~~v~~~~~l~~- 184 (268)
T COG1718 112 FAWARKEFRNLKRAYEAGVRVPEPIAFRN----NVLVMEFIGDDGLPAPRL--KDVPLELEEAEGLYEDVVEYMRRLYK- 184 (268)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCceeecC----CeEEEEeccCCCCCCCCc--ccCCcCchhHHHHHHHHHHHHHHHHH-
Confidence 335777777774 334444554433 35899998653110 001 12223333677788888888888873
Q ss_pred cCCCceeCCCCCCCEEecCCCceEEeecccceec
Q 040826 181 IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKML 214 (347)
Q Consensus 181 ~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~ 214 (347)
..+++|+||+.-|||+. ++.+.++|||-+...
T Consensus 185 -~a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~ 216 (268)
T COG1718 185 -EAGLVHGDLSEYNILVH-DGEPYIIDVSQAVTI 216 (268)
T ss_pred -hcCcccccchhhheEEE-CCeEEEEECcccccc
Confidence 47999999999999999 889999999987754
No 460
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.55 E-value=1.5e-06 Score=74.64 Aligned_cols=138 Identities=17% Similarity=0.130 Sum_probs=84.3
Q ss_pred eeecCC-eeEEEEEeCCCCEEEEEEcccCCChhHHHHHHHHhhcCC-CCcceeeeeEEEeCCeEEEEEeecCCCChHHHh
Q 040826 74 LGRGSA-GLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVR-HPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHL 151 (347)
Q Consensus 74 lg~G~~-g~V~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l 151 (347)
|..|.+ +.||+.... +..+.+|...... .....+|+.+++.+. +--+.+++++....+..++|||+++|.++....
T Consensus 6 ~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~-~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~ 83 (244)
T cd05150 6 VTEGQSGATVYRLDGK-NPGLYLKIAPSGP-TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAALW 83 (244)
T ss_pred cCCCCCcCeEEEEcCC-CCcEEEEecCCCc-ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHhh
Confidence 445555 788999864 4778888775543 445778998888884 344556777766666789999999997776431
Q ss_pred -------------------hcCC---CCCCHH--HHHHHHH--------------------HHHHHHHHhhhc----cCC
Q 040826 152 -------------------LRKD---SVLTWE--RRVKILR--------------------DCALALRYLHHY----IDG 183 (347)
Q Consensus 152 -------------------~~~~---~~~~~~--~~~~i~~--------------------qi~~~l~~Lh~~----~~~ 183 (347)
+... ..+... ....... ........|-.. ...
T Consensus 84 ~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 163 (244)
T cd05150 84 EELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEEDL 163 (244)
T ss_pred cccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcCce
Confidence 0100 011100 0000000 011112222110 134
Q ss_pred CceeCCCCCCCEEecCCCceEEeeccccee
Q 040826 184 CIVHRDIKLTNILLTEKLEPKLSDFGLAKM 213 (347)
Q Consensus 184 ~i~H~dl~p~Nili~~~~~~kl~dfg~~~~ 213 (347)
.++|+|+.|.||++++++.+.|+||+.+..
T Consensus 164 ~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~ 193 (244)
T cd05150 164 VVTHGDACLPNIIVDPGKFSGFIDLGRLGV 193 (244)
T ss_pred EEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence 589999999999999987788999987654
No 461
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.48 E-value=2e-06 Score=73.14 Aligned_cols=141 Identities=19% Similarity=0.183 Sum_probs=83.3
Q ss_pred CeeeecCCeeEEEEEeCCCCEEEEEEcccCCChhHHHHHHHHhhcCCCC--cceeeeeEEE---eCCeEEEEEeecCCCC
Q 040826 72 RFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHP--NLVCLFGCCV---EGGEQYLVYEFCAAGN 146 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~h~--niv~~~~~~~---~~~~~~lv~e~~~~gs 146 (347)
+.++.|..+.||+....+ ..+++|..........+.+|..+++.+... .+..++.... .....+++|++++|.+
T Consensus 3 ~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~~ 81 (239)
T PF01636_consen 3 RPLSGGFSNRVYRVTTDD-GRYVLKFYRPPDAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGRP 81 (239)
T ss_dssp EEEEESSSSEEEEEEETT-SEEEEEEESSHHHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSEE
T ss_pred ccCCCCCeeeEEEEEECC-cEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEecccc
Confidence 468999999999999877 689999876663445677888888887532 3455555433 2345789999999987
Q ss_pred hHH----------------Hh---hcC---CCCCCHHH---------HHHH------------HHHHHH-HHHHhhhc--
Q 040826 147 LAQ----------------HL---LRK---DSVLTWER---------RVKI------------LRDCAL-ALRYLHHY-- 180 (347)
Q Consensus 147 L~~----------------~l---~~~---~~~~~~~~---------~~~i------------~~qi~~-~l~~Lh~~-- 180 (347)
+.. .+ ++. ...+.... .... ...+.+ .+..++..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (239)
T PF01636_consen 82 LDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEALLP 161 (239)
T ss_dssp HHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHhhhc
Confidence 776 11 111 01111100 0000 111222 23333321
Q ss_pred --cCCCceeCCCCCCCEEec-CCCceEEeeccccee
Q 040826 181 --IDGCIVHRDIKLTNILLT-EKLEPKLSDFGLAKM 213 (347)
Q Consensus 181 --~~~~i~H~dl~p~Nili~-~~~~~kl~dfg~~~~ 213 (347)
....++|+|+.|+||+++ +++.+-|+||+.+..
T Consensus 162 ~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 162 KPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp CCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred cCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence 246799999999999999 566667999987664
No 462
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.45 E-value=1.5e-06 Score=68.58 Aligned_cols=128 Identities=17% Similarity=0.179 Sum_probs=91.0
Q ss_pred CCeeeecCCeeEEEEEeCCCCEEEEEEcccCCChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCCCChHHH
Q 040826 71 RRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQH 150 (347)
Q Consensus 71 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 150 (347)
.+.|++|.+|.||+|.+. |..+|+|+-..++....+..|.++|..+.-.++.+=+-.+. .-++.|||++|.+|.+.
T Consensus 27 ~~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~ds~r~~l~kEakiLeil~g~~~~p~vy~yg---~~~i~me~i~G~~L~~~ 102 (201)
T COG2112 27 EKELAKGTTSVVYLGEWR-GGEVALKVRRRDSPRRNLEKEAKILEILAGEGVTPEVYFYG---EDFIRMEYIDGRPLGKL 102 (201)
T ss_pred hhhhhcccccEEEEeecc-CceEEEEEecCCcchhhHHHHHHHHHHhhhcCCCceEEEec---hhhhhhhhhcCcchhhh
Confidence 456999999999999994 56899999988888899999999999987666554332222 22355999999888876
Q ss_pred hhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCC-CCCEEecCCCceEEeeccccee
Q 040826 151 LLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIK-LTNILLTEKLEPKLSDFGLAKM 213 (347)
Q Consensus 151 l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~-p~Nili~~~~~~kl~dfg~~~~ 213 (347)
.... ...+ ...+++.---|. ..||-|+.|. |...++..++.+.|+||..++.
T Consensus 103 ~~~~----~rk~----l~~vlE~a~~LD---~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~ 155 (201)
T COG2112 103 EIGG----DRKH----LLRVLEKAYKLD---RLGIEHGELSRPWKNVLVNDRDVYIIDFDSATF 155 (201)
T ss_pred hhcc----cHHH----HHHHHHHHHHHH---HhccchhhhcCCceeEEecCCcEEEEEccchhh
Confidence 5321 2222 233445433344 6789999987 5544555555999999998874
No 463
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=98.36 E-value=1.4e-05 Score=65.61 Aligned_cols=127 Identities=22% Similarity=0.252 Sum_probs=89.9
Q ss_pred cCCeeeecCCeeEEEEEeCCCCEEEEEEcccCC------------------ChhHHHHHHHHhhcCC------CCcceee
Q 040826 70 DRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSN------------------NTDSFSREVEGLSRVR------HPNLVCL 125 (347)
Q Consensus 70 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~------------------~~~~~~~e~~~l~~l~------h~niv~~ 125 (347)
...+||+|+.=.||. ++++...+||+..+.. ...+..+|+.....+. +.+|.++
T Consensus 5 ~~~~i~~G~~R~cy~--HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~ 82 (199)
T PF10707_consen 5 ESDLIAQGGERDCYQ--HPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF 82 (199)
T ss_pred CCcccccCCCceEEE--CCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence 346799999988885 4455667888776554 2345667776665555 7899999
Q ss_pred eeEEEeCCeEEEEEeecCC------CChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecC
Q 040826 126 FGCCVEGGEQYLVYEFCAA------GNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTE 199 (347)
Q Consensus 126 ~~~~~~~~~~~lv~e~~~~------gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~ 199 (347)
+|+.+++....+|+|.+.+ .||.+++.+. .++. ...+.+.++ ..+|- ..+|+.+|++|+||++..
T Consensus 83 ~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~--~~~~-~~~~~L~~f---~~~l~---~~~Iv~~dl~~~NIv~~~ 153 (199)
T PF10707_consen 83 YGFVETNLGLGLVVELIRDADGNISPTLEDYLKEG--GLTE-ELRQALDEF---KRYLL---DHHIVIRDLNPHNIVVQR 153 (199)
T ss_pred eEEEecCCceEEEEEEEECCCCCcCccHHHHHHcC--CccH-HHHHHHHHH---HHHHH---HcCCeecCCCcccEEEEe
Confidence 9999999999999999743 3788888443 3454 444444444 44554 567999999999999964
Q ss_pred CC----ceEEee
Q 040826 200 KL----EPKLSD 207 (347)
Q Consensus 200 ~~----~~kl~d 207 (347)
.. .+.|+|
T Consensus 154 ~~~~~~~lvlID 165 (199)
T PF10707_consen 154 RDSGEFRLVLID 165 (199)
T ss_pred cCCCceEEEEEe
Confidence 32 467776
No 464
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.36 E-value=3.3e-06 Score=72.01 Aligned_cols=73 Identities=12% Similarity=0.157 Sum_probs=46.0
Q ss_pred CeeeecCCee-EEEEEeCCCCEEEEEEcccCCChhHHHHHHHHhhcCCCC---cceeeeeEEEeC---CeEEEEEeecCC
Q 040826 72 RFLGRGSAGL-VYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHP---NLVCLFGCCVEG---GEQYLVYEFCAA 144 (347)
Q Consensus 72 ~~lg~G~~g~-V~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~~~---~~~~lv~e~~~~ 144 (347)
+.++.|+... ||+. +..+++|............+|.+.++.+... .+..+++..... ...+++|++++|
T Consensus 3 ~~~~~gG~~n~vy~~----~~~~VlR~~~~~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i~G 78 (235)
T cd05155 3 EPVDSGGTDNATFRL----GDDMSVRLPSAAGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWLEG 78 (235)
T ss_pred eeccCCCcccceEEc----CCceEEEcCCccchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEeecC
Confidence 4578777765 8875 2357778765544455788999998877531 233333332221 234789999998
Q ss_pred CChH
Q 040826 145 GNLA 148 (347)
Q Consensus 145 gsL~ 148 (347)
.++.
T Consensus 79 ~~l~ 82 (235)
T cd05155 79 ETAT 82 (235)
T ss_pred CCCC
Confidence 7663
No 465
>PRK10593 hypothetical protein; Provisional
Probab=98.29 E-value=1.9e-05 Score=69.68 Aligned_cols=77 Identities=10% Similarity=0.056 Sum_probs=57.5
Q ss_pred cCCeeeecCCeeEEEEEeCCCCEEEEEEcccCCChhHHHHHHHHhhcCCC---CcceeeeeEEEe---CCeEEEEEeecC
Q 040826 70 DRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRH---PNLVCLFGCCVE---GGEQYLVYEFCA 143 (347)
Q Consensus 70 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~h---~niv~~~~~~~~---~~~~~lv~e~~~ 143 (347)
..+.||.|..+.||.....+++ +.+|..........+..|...++.+.- -.+.++++++.. .+..++|||+++
T Consensus 18 ~~~~i~~G~~~~vy~~~~~~~~-~~~k~~~~~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~ 96 (297)
T PRK10593 18 RVECISEQPYAALWALYDSQGN-PMPLMARSFSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLR 96 (297)
T ss_pred eeeecCCccceeEEEEEcCCCC-EEEEEecccccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccC
Confidence 4467999999999999875664 666764332345688899999988853 357778877654 366899999999
Q ss_pred CCCh
Q 040826 144 AGNL 147 (347)
Q Consensus 144 ~gsL 147 (347)
++++
T Consensus 97 G~~~ 100 (297)
T PRK10593 97 GVSV 100 (297)
T ss_pred CEec
Confidence 8765
No 466
>PLN02876 acyl-CoA dehydrogenase
Probab=98.26 E-value=1.7e-05 Score=79.78 Aligned_cols=76 Identities=13% Similarity=0.306 Sum_probs=56.1
Q ss_pred CCeeeecCCeeEEEEEeCCC---CEEEEEEcccCC---ChhHHHHHHHHhhcCC-CCcc--eeeeeEEEeC---CeEEEE
Q 040826 71 RRFLGRGSAGLVYKGVLPSG---QVVAIKHIYKSN---NTDSFSREVEGLSRVR-HPNL--VCLFGCCVEG---GEQYLV 138 (347)
Q Consensus 71 ~~~lg~G~~g~V~~~~~~~~---~~vavK~~~~~~---~~~~~~~e~~~l~~l~-h~ni--v~~~~~~~~~---~~~~lv 138 (347)
.+.++.|.++.+|+....++ ..+++|+..... ....+.+|..+++.+. |+++ .+++.++.+. +..++|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence 56688999999999886554 367788765432 2346889999999995 6654 6777777654 467899
Q ss_pred EeecCCCC
Q 040826 139 YEFCAAGN 146 (347)
Q Consensus 139 ~e~~~~gs 146 (347)
|||++|..
T Consensus 123 ME~v~G~~ 130 (822)
T PLN02876 123 MEYLEGRI 130 (822)
T ss_pred EEecCCcc
Confidence 99999864
No 467
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.25 E-value=7e-08 Score=89.69 Aligned_cols=182 Identities=23% Similarity=0.221 Sum_probs=128.3
Q ss_pred CeeeecCCeeEEEEEeCCCCEEEEEEcccCCChhHHHHHHHHhhcCCCCc-ceeeeeEEEeCCeEEEEEeecCCC-ChHH
Q 040826 72 RFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPN-LVCLFGCCVEGGEQYLVYEFCAAG-NLAQ 149 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~e~~~~g-sL~~ 149 (347)
+.+++++++.++|.+-.-.+....+.+... ....-++++|.+++||| .+..++-++.+...++.++++.++ +...
T Consensus 248 h~fvK~altknpKkRptaeklL~h~fvs~~---l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs~~~ 324 (829)
T KOG0576|consen 248 HNFVKGALTKNPKKRPTAEKLLQHPFVSQT---LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRSSAL 324 (829)
T ss_pred HHHHHHHhcCCCccCCChhhheeceeeccc---hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCccccc
Confidence 447889999999988422233335655433 34446788999999999 666666666677888999999887 3222
Q ss_pred HhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeecccCCC
Q 040826 150 HLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTI 229 (347)
Q Consensus 150 ~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~ 229 (347)
......-.+...+...+.+.-.++++++| +..-+|+| ||+..+ +..+.+||+....+.... ......++.
T Consensus 325 ~~~~se~~~~~~~~~~~~r~et~~l~~l~---~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~--~~~t~~~~~ 394 (829)
T KOG0576|consen 325 EMTVSEIALEQYQFAYPLRKETRPLAELH---SSYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM--KPRTAIGTP 394 (829)
T ss_pred cCChhhHhhhhhhhhhhhhhhcccccccc---cccccCcc----cccccc-cccccccccCCcccCccc--ccccCCCCC
Confidence 22112222444455556677778899999 44457888 766665 688999999887664322 334567899
Q ss_pred CccccccccCCccCCcccHHHHHHHHHHHHhCCCCcC
Q 040826 230 GYMDPEYMTNAKLTCASDIYSFGIVALQLLSGQKVIE 266 (347)
Q Consensus 230 ~y~aPE~~~~~~~~~~~Dv~slG~il~~lltg~~p~~ 266 (347)
.|+|||+.....+....|+|++|.-..++--|.+|-.
T Consensus 395 ~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~ 431 (829)
T KOG0576|consen 395 EPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS 431 (829)
T ss_pred CCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence 9999999999999999999999987777777776654
No 468
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=98.15 E-value=2.1e-05 Score=69.62 Aligned_cols=141 Identities=16% Similarity=0.104 Sum_probs=83.8
Q ss_pred CCeeeecCCeeEEEEEeCCCCEEEEEEcccCCChhHHHHHHHHhhcCCCCc--ceeeeeE------EEeCCeEEEEEeec
Q 040826 71 RRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPN--LVCLFGC------CVEGGEQYLVYEFC 142 (347)
Q Consensus 71 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~------~~~~~~~~lv~e~~ 142 (347)
.+.+..|....+|+....+ ..+++|.... ........|+.++..+.+.+ +.+++.. ....+..+++++|+
T Consensus 19 i~~i~~G~~n~~y~v~~~~-~~~vLr~~~~-~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~i 96 (296)
T cd05153 19 FEGISAGIENTNYFVTTDS-GRYVLTLFEK-VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVEFL 96 (296)
T ss_pred eecccCccccceEEEEeCC-CcEEEEEcCC-CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEEeC
Confidence 3557778888999988754 4688888765 44455667888777774322 3333321 12345678999999
Q ss_pred CCCChHH-----------Hh---hc--CC--------CCCCHHHHH----------HHHHHHHHHHHHhhh----ccCCC
Q 040826 143 AAGNLAQ-----------HL---LR--KD--------SVLTWERRV----------KILRDCALALRYLHH----YIDGC 184 (347)
Q Consensus 143 ~~gsL~~-----------~l---~~--~~--------~~~~~~~~~----------~i~~qi~~~l~~Lh~----~~~~~ 184 (347)
+|.++.. .+ +. .+ ....|.... .....+..++.++.. ....+
T Consensus 97 ~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~ 176 (296)
T cd05153 97 AGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLPRG 176 (296)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCCCc
Confidence 9866421 01 10 00 001111110 011112333444432 11357
Q ss_pred ceeCCCCCCCEEecCCCceEEeeccccee
Q 040826 185 IVHRDIKLTNILLTEKLEPKLSDFGLAKM 213 (347)
Q Consensus 185 i~H~dl~p~Nili~~~~~~kl~dfg~~~~ 213 (347)
++|+|+.|.|+++++++.+.|.||+.+..
T Consensus 177 l~HgD~~~~Nil~~~~~~~~iIDfe~a~~ 205 (296)
T cd05153 177 VIHADLFRDNVLFDGDELSGVIDFYFACT 205 (296)
T ss_pred CCccCcCcccEEEeCCceEEEeehhhhcC
Confidence 99999999999999987778999987664
No 469
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=98.14 E-value=3.8e-05 Score=65.46 Aligned_cols=72 Identities=17% Similarity=0.152 Sum_probs=47.2
Q ss_pred CeeeecCCeeEEEEEeCC--CCEEEEEEcccCCCh-hHHHHHHHHhhcCCCCcce-eeeeEEEeCCeEEEEEeecCCCCh
Q 040826 72 RFLGRGSAGLVYKGVLPS--GQVVAIKHIYKSNNT-DSFSREVEGLSRVRHPNLV-CLFGCCVEGGEQYLVYEFCAAGNL 147 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~~~~-~~~~~e~~~l~~l~h~niv-~~~~~~~~~~~~~lv~e~~~~gsL 147 (347)
+.|..|-...+|+....+ +..+++|........ -...+|..+++.+...+++ ++++... -.++|||++|.++
T Consensus 4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e~i~G~~l 79 (235)
T cd05157 4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYEFIPGRTL 79 (235)
T ss_pred EEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEEeeCCCcC
Confidence 457778888999998764 678889976543221 2334788888888543333 3333322 2479999998765
No 470
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=98.12 E-value=3.1e-05 Score=66.99 Aligned_cols=135 Identities=15% Similarity=0.097 Sum_probs=77.7
Q ss_pred eeeecCCeeEEEEEeCCCCEEEEEEcccCCCh--hHHHHHHHHhhcCCCCcce-eeeeEEEeCCeEEEEEeecCCCChHH
Q 040826 73 FLGRGSAGLVYKGVLPSGQVVAIKHIYKSNNT--DSFSREVEGLSRVRHPNLV-CLFGCCVEGGEQYLVYEFCAAGNLAQ 149 (347)
Q Consensus 73 ~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~h~niv-~~~~~~~~~~~~~lv~e~~~~gsL~~ 149 (347)
.+..|-.+.+|+... +|..+++|........ -...+|..+++.+....+. +++... . -++|+||++|.++..
T Consensus 3 ~~~~G~tn~~y~~~~-~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~--~--~~~v~e~i~G~~~~~ 77 (256)
T TIGR02721 3 TLSGGLTNRSWRIEH-PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVN--E--HWLLVEWLEGEVITL 77 (256)
T ss_pred cCCCcCcCCeEEEEe-CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEe--C--CEEEEEeccCccccc
Confidence 356688889998874 5677888876543222 2457888888888643333 333322 2 368999999866532
Q ss_pred H--------------h---hcC---CCCCCHH-HHHHHHHHH---------HHHHHHhhhc-----cCCCceeCCCCCCC
Q 040826 150 H--------------L---LRK---DSVLTWE-RRVKILRDC---------ALALRYLHHY-----IDGCIVHRDIKLTN 194 (347)
Q Consensus 150 ~--------------l---~~~---~~~~~~~-~~~~i~~qi---------~~~l~~Lh~~-----~~~~i~H~dl~p~N 194 (347)
. + ++. +.+++.. ....+..++ ...+..+... ....++|+|+.|.|
T Consensus 78 ~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~N 157 (256)
T TIGR02721 78 DQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYN 157 (256)
T ss_pred ccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCc
Confidence 1 1 111 1112211 111211111 1111112111 12358999999999
Q ss_pred EEecCCCceEEeeccccee
Q 040826 195 ILLTEKLEPKLSDFGLAKM 213 (347)
Q Consensus 195 ili~~~~~~kl~dfg~~~~ 213 (347)
|++++++ +.++||..+..
T Consensus 158 il~~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 158 LVVTPQG-LKLIDWEYASD 175 (256)
T ss_pred EEEeCCC-CEEEeccccCc
Confidence 9999876 78999987764
No 471
>PRK05231 homoserine kinase; Provisional
Probab=98.08 E-value=0.00013 Score=65.24 Aligned_cols=156 Identities=15% Similarity=0.130 Sum_probs=85.5
Q ss_pred ccHHHHHHHhcCccc-----CCeeeecCCeeEEEEEeCCCCEEEEEEcccCCChhHHHHHHHHhhcCC-----CCcceee
Q 040826 56 FSKDEIENAINNDWD-----RRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVR-----HPNLVCL 125 (347)
Q Consensus 56 ~~~~~~~~~~~~~~~-----~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~-----h~niv~~ 125 (347)
++.+++......|.. .+.++.|....+|+....+| .+++|+.. .........+...+..+. .|.+++.
T Consensus 7 ls~~~l~~~l~~y~~~~~~~~~~l~~G~~n~~y~v~t~~g-~~vLK~~~-~~~~~~l~~~~~~l~~L~~~glpvP~~i~~ 84 (319)
T PRK05231 7 VSDDELAAFLAPYDLGELLSLKGIAEGIENSNFFLTTTQG-EYVLTLFE-RLTAEDLPFFLGLMQHLAARGVPVPAPVAR 84 (319)
T ss_pred CCHHHHHHHHHhcCCchhhccchhccccccceEEEEeCCC-cEEEEEec-cCChHHhHHHHHHHHHHHHCCCCCCcceeC
Confidence 344555555555543 24566777789999987655 68888775 333444445566665553 2332221
Q ss_pred e-e--EEEeCCeEEEEEeecCCCChH-----------HHh---hcCCC--------C--C-CHHHHHH------------
Q 040826 126 F-G--CCVEGGEQYLVYEFCAAGNLA-----------QHL---LRKDS--------V--L-TWERRVK------------ 165 (347)
Q Consensus 126 ~-~--~~~~~~~~~lv~e~~~~gsL~-----------~~l---~~~~~--------~--~-~~~~~~~------------ 165 (347)
. | +....+..+++++|++|..+. +.+ +.... . + .+.....
T Consensus 85 ~~G~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (319)
T PRK05231 85 RDGAALGELAGKPAAIVTFLEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAA 164 (319)
T ss_pred CCCCEeeeeCCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHH
Confidence 1 1 112355678999999986431 111 11000 0 1 1111111
Q ss_pred HHHH-HHHHHHHhhhc----cCCCceeCCCCCCCEEecCCCceEEeeccccee
Q 040826 166 ILRD-CALALRYLHHY----IDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKM 213 (347)
Q Consensus 166 i~~q-i~~~l~~Lh~~----~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~ 213 (347)
.+.+ +...+..+... ...+++|+|+.|.||+++++...-++||+.+..
T Consensus 165 ~l~~~~~~~~~~~~~~~~~~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~ 217 (319)
T PRK05231 165 LLEAELAAQLAFLASAAWPALPRGVIHADLFRDNVLFEGDRLSGFIDFYFACN 217 (319)
T ss_pred HHHHHHHHHHHhhhccccccCCcccCCCCCCCCcEEEECCceEEEEecccccC
Confidence 1111 11122232210 246899999999999999765568999987764
No 472
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.06 E-value=2e-05 Score=64.47 Aligned_cols=102 Identities=24% Similarity=0.212 Sum_probs=80.7
Q ss_pred HHHHHhhcCCC-CcceeeeeEEEeCCeEEEEEeecCCCChHHHhh--cCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCc
Q 040826 109 REVEGLSRVRH-PNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLL--RKDSVLTWERRVKILRDCALALRYLHHYIDGCI 185 (347)
Q Consensus 109 ~e~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~--~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i 185 (347)
.|.-+++.+.+ +++.+++|.|-. +++.||...+++..... ..-...+|..+.+++.++++.+.+|++.....+
T Consensus 8 ~E~lll~~l~~~~~~pk~lG~CG~----~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~ 83 (188)
T PF12260_consen 8 NEPLLLQLLQGSEPFPKLLGSCGR----FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFF 83 (188)
T ss_pred cHHHHHHHcCCCCCCCCeeeECCC----EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcE
Confidence 57778888865 699999999843 57899998766642110 011247899999999999999999996555678
Q ss_pred eeCCCCCCCEEecCCCceEEeecccceec
Q 040826 186 VHRDIKLTNILLTEKLEPKLSDFGLAKML 214 (347)
Q Consensus 186 ~H~dl~p~Nili~~~~~~kl~dfg~~~~~ 214 (347)
...|++++|+-+++++++|++|.......
T Consensus 84 ~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 84 YLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred EEeecchHHeEEeCCCcEEEEechhcchh
Confidence 89999999999999999999999766543
No 473
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.97 E-value=0.00032 Score=62.41 Aligned_cols=156 Identities=13% Similarity=0.114 Sum_probs=90.2
Q ss_pred cHHHHHHHhcCccc-----CCeeeecCCeeEEEEEeCCCCEEEEEEcccCCChhHHHHHHHHhhcCCCCc--ceeeeeE-
Q 040826 57 SKDEIENAINNDWD-----RRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPN--LVCLFGC- 128 (347)
Q Consensus 57 ~~~~~~~~~~~~~~-----~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~- 128 (347)
+.+++....+.|.. .+.++.|....+|+....+| .+++|.............|.+++..+.... +.+++..
T Consensus 8 ~~~~l~~~l~~y~~~~~~~i~~~~~G~~n~~y~v~t~~~-~~vLK~~~~~~~~~~i~~e~~~l~~L~~~g~pvp~~i~t~ 86 (307)
T TIGR00938 8 SDEEMSSFLDGYDLGELLSLKGIAEGVENSNYLLTTDVG-RYILTLYEKRVKAEELPFFLALTTHLAARGLPVPKPVKSR 86 (307)
T ss_pred CHHHHHHHHHhcCCCCceeccccCCccccceEEEEeCCC-cEEEEEecCCCCHHHHHHHHHHHHHHHHCCCCCCccccCC
Confidence 44566665555544 34566777789999887555 577887766444555666777777764222 3333321
Q ss_pred -----EEeCCeEEEEEeecCCCChH----H-------Hh---hc--CC---C------CCCHHHHH------------HH
Q 040826 129 -----CVEGGEQYLVYEFCAAGNLA----Q-------HL---LR--KD---S------VLTWERRV------------KI 166 (347)
Q Consensus 129 -----~~~~~~~~lv~e~~~~gsL~----~-------~l---~~--~~---~------~~~~~~~~------------~i 166 (347)
....+..+++++|++|.++. + .+ +. .+ . ...|.... ..
T Consensus 87 ~g~~~~~~~g~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~ 166 (307)
T TIGR00938 87 DGRQLSTLAGKPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHM 166 (307)
T ss_pred CCCeehhcCCeEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHH
Confidence 12245678999999885431 1 11 11 00 0 00111000 00
Q ss_pred HHHHHHHHHHhhh----ccCCCceeCCCCCCCEEecCCCceEEeeccccee
Q 040826 167 LRDCALALRYLHH----YIDGCIVHRDIKLTNILLTEKLEPKLSDFGLAKM 213 (347)
Q Consensus 167 ~~qi~~~l~~Lh~----~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~ 213 (347)
...+.+.+.++.. ....+++|+|+++.|+++++++...|+||+.+..
T Consensus 167 ~~~l~~~~~~l~~~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~ 217 (307)
T TIGR00938 167 GAELDKELDYLDKFWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFACT 217 (307)
T ss_pred HHHHHHHHHHHHhhhhhcCCCccCCCCCCcCcEEEECCceEEEeecccccC
Confidence 1122334444432 1247899999999999999887778999987753
No 474
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.88 E-value=4.8e-05 Score=75.97 Aligned_cols=195 Identities=19% Similarity=0.168 Sum_probs=129.2
Q ss_pred HHHHHHhhcCCCCcceeeeeEEEeCCeE----EEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCC
Q 040826 108 SREVEGLSRVRHPNLVCLFGCCVEGGEQ----YLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDG 183 (347)
Q Consensus 108 ~~e~~~l~~l~h~niv~~~~~~~~~~~~----~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~ 183 (347)
..|+..+..+.|+|+..++.+-...... .+..+++..-++...+... ...+....+.+..+..+|+.++| ..
T Consensus 230 E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v-~~i~~~~~r~~~~~~~~GL~~~h---~~ 305 (1351)
T KOG1035|consen 230 EIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSV-GSIPLETLRILHQKLLEGLAYLH---SL 305 (1351)
T ss_pred HHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhc-cccCHHHHHHHHHHHhhhHHHHH---Hh
Confidence 3466778888999999999887654332 2445677777777766443 45788899999999999999999 44
Q ss_pred CceeCCCCCC---CEEecCCCceEEe--ecccceecCCCccceeecccCCCCccccccccCCccCC--cccHHHHHHHHH
Q 040826 184 CIVHRDIKLT---NILLTEKLEPKLS--DFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTC--ASDIYSFGIVAL 256 (347)
Q Consensus 184 ~i~H~dl~p~---Nili~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~--~~Dv~slG~il~ 256 (347)
...|.-+..+ +--.+..+.+..+ ||+.+..+..... ......+..+.+||......+.. ..|+|++|....
T Consensus 306 ~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~--~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~ 383 (1351)
T KOG1035|consen 306 SLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEK--SFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLL 383 (1351)
T ss_pred ccceeEEecccccccccCccceeecchhhhcccccCCCccc--chhhcCccccccccccccccchhhhhhHHHHHHHHHh
Confidence 4455544444 4445566667766 8887776542221 12223456677888777655544 479999999999
Q ss_pred HHHhCCCCcCCChhhhhHHHHHHhhhcCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 040826 257 QLLSGQKVIELDFDARDQLTRKARDVSMGKRPIKDFEDPRLNGNINRADFESILKIAVLCVAKSSKGRPTIDVVYEEI 334 (347)
Q Consensus 257 ~lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~p~~Rps~~ei~~~l 334 (347)
.+..|..+...... ...+++.. .. ..+......|+..++++|++..+++...
T Consensus 384 ~~~~~~~i~~~~~~------------------~~~~l~~~----~~----~~~~d~~~~~~~~~~~~Rl~~~~ll~~~ 435 (1351)
T KOG1035|consen 384 QLSQGEDISEKSAV------------------PVSLLDVL----ST----SELLDALPKCLDEDSEERLSALELLTHP 435 (1351)
T ss_pred hhhhcCcccccccc------------------hhhhhccc----cc----hhhhhhhhhhcchhhhhccchhhhhhch
Confidence 99988765431100 01111110 00 1466667779999999999999988653
No 475
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.87 E-value=0.00013 Score=64.78 Aligned_cols=73 Identities=25% Similarity=0.259 Sum_probs=47.8
Q ss_pred CeeeecCCeeEEEEEeCC-------CCEEEEEEcccCCC-hhHHHHHHHHhhcCCCCcce-eeeeEEEeCCeEEEEEeec
Q 040826 72 RFLGRGSAGLVYKGVLPS-------GQVVAIKHIYKSNN-TDSFSREVEGLSRVRHPNLV-CLFGCCVEGGEQYLVYEFC 142 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~~-------~~~vavK~~~~~~~-~~~~~~e~~~l~~l~h~niv-~~~~~~~~~~~~~lv~e~~ 142 (347)
+.+..|-...+|+....+ ++.+++|....... .....+|..++..+...++. ++++++. + ..|+||+
T Consensus 4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~-~---~~v~e~i 79 (302)
T cd05156 4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERNLGPKLYGIFP-N---GRIEEFI 79 (302)
T ss_pred EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCCCCCceEEEeC-C---Cchhhee
Confidence 346667778999998655 57899998765432 23566788888888533333 4444433 2 3589999
Q ss_pred CCCChH
Q 040826 143 AAGNLA 148 (347)
Q Consensus 143 ~~gsL~ 148 (347)
+|.++.
T Consensus 80 ~G~~l~ 85 (302)
T cd05156 80 PSRTLT 85 (302)
T ss_pred CCCcCC
Confidence 887654
No 476
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.81 E-value=0.00051 Score=56.20 Aligned_cols=123 Identities=28% Similarity=0.352 Sum_probs=85.3
Q ss_pred cCcccCCeeeecCC-eeEEEEEeCCCCEEEEEEccc---C---------C--C---------hhHHHHHHHHhhcCC---
Q 040826 66 NNDWDRRFLGRGSA-GLVYKGVLPSGQVVAIKHIYK---S---------N--N---------TDSFSREVEGLSRVR--- 118 (347)
Q Consensus 66 ~~~~~~~~lg~G~~-g~V~~~~~~~~~~vavK~~~~---~---------~--~---------~~~~~~e~~~l~~l~--- 118 (347)
..+...+.||.|.- |.||++.. +|+.+|+|.+.. . . . ..-|..|.+...+++
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I-~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~ 115 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEI-DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAG 115 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEE-CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcc
Confidence 56777888999999 99999999 678999998311 0 0 0 123677888777774
Q ss_pred CCcc--eeeeeEEEeC------------------CeEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhh
Q 040826 119 HPNL--VCLFGCCVEG------------------GEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLH 178 (347)
Q Consensus 119 h~ni--v~~~~~~~~~------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh 178 (347)
+.++ ++.+|+..-. ..+.+|.||.+... .+... -+.++.+-+..+|
T Consensus 116 ~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~----------~~~~~----~~~~~~~dl~~~~ 181 (207)
T PF13095_consen 116 REGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP----------PLQIR----DIPQMLRDLKILH 181 (207)
T ss_pred ccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc----------ccchh----HHHHHHHHHHHHH
Confidence 4455 8888886322 12467777766532 12222 3445566677788
Q ss_pred hccCCCceeCCCCCCCEEecCCCceEEeecccc
Q 040826 179 HYIDGCIVHRDIKLTNILLTEKLEPKLSDFGLA 211 (347)
Q Consensus 179 ~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg~~ 211 (347)
..||+-+|+++.|.. .-+|+|||.+
T Consensus 182 ---k~gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 182 ---KLGIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred ---HCCeeeccCcccccc-----CCEEEecccC
Confidence 899999999999976 3478999864
No 477
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.65 E-value=0.0016 Score=59.52 Aligned_cols=73 Identities=19% Similarity=0.162 Sum_probs=51.5
Q ss_pred CeeeecCCeeEEEEEeCCC-CEEEEEEcccC---------CChhHHHHHHHHhhcCC---CCcceeeeeEEEeCCeEEEE
Q 040826 72 RFLGRGSAGLVYKGVLPSG-QVVAIKHIYKS---------NNTDSFSREVEGLSRVR---HPNLVCLFGCCVEGGEQYLV 138 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~~~-~~vavK~~~~~---------~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv 138 (347)
+.||-|.++.||++...+| +.++||.-.+. -..+....|.+.|+.+. ..++.+++.+ +.+..++|
T Consensus 32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~lV 109 (401)
T PRK09550 32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVTV 109 (401)
T ss_pred eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEEE
Confidence 4689999999999998776 48999975421 12345667888887763 2345666655 34557899
Q ss_pred EeecCCCC
Q 040826 139 YEFCAAGN 146 (347)
Q Consensus 139 ~e~~~~gs 146 (347)
|||+++..
T Consensus 110 ME~L~~~~ 117 (401)
T PRK09550 110 MEDLSDHK 117 (401)
T ss_pred EecCCCcc
Confidence 99998643
No 478
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=97.54 E-value=0.00087 Score=58.51 Aligned_cols=31 Identities=32% Similarity=0.462 Sum_probs=25.8
Q ss_pred CCceeCCCCCCCEEecCCCc-eEEeeccccee
Q 040826 183 GCIVHRDIKLTNILLTEKLE-PKLSDFGLAKM 213 (347)
Q Consensus 183 ~~i~H~dl~p~Nili~~~~~-~kl~dfg~~~~ 213 (347)
..++|+|++|.||++++++. .-|.||+.+..
T Consensus 185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i 216 (276)
T cd05152 185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKV 216 (276)
T ss_pred CeeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence 35899999999999997555 46999998775
No 479
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.41 E-value=0.00019 Score=62.49 Aligned_cols=131 Identities=14% Similarity=0.079 Sum_probs=89.5
Q ss_pred cccCCeeeecCCeeEEEEEeCCCCEEEEEEcccC----------C------Ch--------hHHHHHHHHhhcCC-CC-c
Q 040826 68 DWDRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKS----------N------NT--------DSFSREVEGLSRVR-HP-N 121 (347)
Q Consensus 68 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~----------~------~~--------~~~~~e~~~l~~l~-h~-n 121 (347)
+...+.||-|--+.||.+...+|+..++|.=.-. . .. -...+|...|+.+. |. -
T Consensus 94 ~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gfp 173 (465)
T KOG2268|consen 94 ESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGFP 173 (465)
T ss_pred hhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCCC
Confidence 5567889999999999999999999998842100 0 00 02446777777774 21 2
Q ss_pred ceeeeeEEEeCCeEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCC
Q 040826 122 LVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKL 201 (347)
Q Consensus 122 iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~ 201 (347)
+.+.++ .+..++|||++.+-+|...-.- .+.+ .+...+..-+.-|- ..|+||+|.+--||++++++
T Consensus 174 VPkpiD----~~RH~Vvmelv~g~Pl~~v~~v----~d~~---~ly~~lm~~Iv~la---~~GlIHgDFNEFNimv~dd~ 239 (465)
T KOG2268|consen 174 VPKPID----HNRHCVVMELVDGYPLRQVRHV----EDPP---TLYDDLMGLIVRLA---NHGLIHGDFNEFNIMVKDDD 239 (465)
T ss_pred CCCccc----ccceeeHHHhhcccceeeeeec----CChH---HHHHHHHHHHHHHH---HcCceecccchheeEEecCC
Confidence 333333 3467899999998777553211 1222 23444444555565 78999999999999999999
Q ss_pred ceEEeecccce
Q 040826 202 EPKLSDFGLAK 212 (347)
Q Consensus 202 ~~kl~dfg~~~ 212 (347)
.++++||--..
T Consensus 240 ~i~vIDFPQmv 250 (465)
T KOG2268|consen 240 KIVVIDFPQMV 250 (465)
T ss_pred CEEEeechHhh
Confidence 99999996443
No 480
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.37 E-value=0.002 Score=57.27 Aligned_cols=137 Identities=21% Similarity=0.263 Sum_probs=94.7
Q ss_pred CeeeecCCeeEEEEEeCCCCEEEEEEcccC-----------------------CChhH-----HHHHHHHhhcCCCCcce
Q 040826 72 RFLGRGSAGLVYKGVLPSGQVVAIKHIYKS-----------------------NNTDS-----FSREVEGLSRVRHPNLV 123 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~-----------------------~~~~~-----~~~e~~~l~~l~h~niv 123 (347)
..|..|--+.||.+...+|..+|||++..+ .+... ...|+..|++++...|.
T Consensus 150 GCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aGIP 229 (520)
T KOG2270|consen 150 GCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAGIP 229 (520)
T ss_pred cccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 457889999999999889999999987433 01111 23577788888765543
Q ss_pred eeeeEEEeCCeEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCce
Q 040826 124 CLFGCCVEGGEQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEP 203 (347)
Q Consensus 124 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~ 203 (347)
..--.... ...|||+|+-. .=...=.-+...++...+..+-.|++.-+.-|.+. .+++|.||+--|+|+-+ |.+
T Consensus 230 ~PePIlLk--~hVLVM~FlGr-dgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~--c~LVHADLSEfN~Lyhd-G~l 303 (520)
T KOG2270|consen 230 CPEPILLK--NHVLVMEFLGR-DGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQK--CRLVHADLSEFNLLYHD-GKL 303 (520)
T ss_pred CCCceeee--cceEeeeeccC-CCCcCcccccccCChHHHHHHHHHHHHHHHHHHHH--hceeccchhhhhheEEC-CEE
Confidence 32222221 34689999853 21111111344577778888889999999988874 48999999999998875 589
Q ss_pred EEeecccceec
Q 040826 204 KLSDFGLAKML 214 (347)
Q Consensus 204 kl~dfg~~~~~ 214 (347)
.++|.+-+...
T Consensus 304 yiIDVSQSVE~ 314 (520)
T KOG2270|consen 304 YIIDVSQSVEH 314 (520)
T ss_pred EEEEccccccC
Confidence 99998776643
No 481
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=97.37 E-value=0.002 Score=56.86 Aligned_cols=130 Identities=18% Similarity=0.185 Sum_probs=78.0
Q ss_pred cCCeeEEEEEeCCCCEEEEEEccc-C---CChhHHHHHHHHhhcCCC--CcceeeeeEEEeCC--eEEEEEeecCCCChH
Q 040826 77 GSAGLVYKGVLPSGQVVAIKHIYK-S---NNTDSFSREVEGLSRVRH--PNLVCLFGCCVEGG--EQYLVYEFCAAGNLA 148 (347)
Q Consensus 77 G~~g~V~~~~~~~~~~vavK~~~~-~---~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~--~~~lv~e~~~~gsL~ 148 (347)
|....+|.... +++.++++ ..+ . .......+|+.+++.+.- .-....+++|.++. ..+.||+|.+|..+.
T Consensus 36 G~sn~t~~~~~-~~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~~ 113 (321)
T COG3173 36 GWSNDTFRLGD-TGQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGEVVW 113 (321)
T ss_pred CcccceEEEec-CCceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecceecc
Confidence 33334455444 37888888 332 1 223356677888777742 23455667776655 779999999985332
Q ss_pred HHhhcCCCCCCHHHHHHHH-HHHHHHHHHhhhcc----------------------------------------------
Q 040826 149 QHLLRKDSVLTWERRVKIL-RDCALALRYLHHYI---------------------------------------------- 181 (347)
Q Consensus 149 ~~l~~~~~~~~~~~~~~i~-~qi~~~l~~Lh~~~---------------------------------------------- 181 (347)
+.+.. .+.. .+.+ ..+++.|.-||+-.
T Consensus 114 ~~~~~----~~~~--~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~~Wl 187 (321)
T COG3173 114 SALPP----ESLG--RQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLIKWL 187 (321)
T ss_pred CcCCc----ccch--HHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHHHHH
Confidence 21110 0000 1111 23444444444211
Q ss_pred ---------CCCceeCCCCCCCEEecCCCceEEeecccceec
Q 040826 182 ---------DGCIVHRDIKLTNILLTEKLEPKLSDFGLAKML 214 (347)
Q Consensus 182 ---------~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~ 214 (347)
...++|+|+++.|++++.++-+-|.||+++..-
T Consensus 188 ~~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lG 229 (321)
T COG3173 188 EANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLG 229 (321)
T ss_pred HhcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEeccccccC
Confidence 135899999999999999988999999998864
No 482
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=97.34 E-value=0.0017 Score=56.86 Aligned_cols=74 Identities=19% Similarity=0.236 Sum_probs=49.2
Q ss_pred cCCeeeecCCeeEEEEEeCCCCEEEEEEcccCCChhHHHHHHHHhhcCC---CCcceeeeeEEEeCCeEEEEEeecCCC
Q 040826 70 DRRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVR---HPNLVCLFGCCVEGGEQYLVYEFCAAG 145 (347)
Q Consensus 70 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~~~g 145 (347)
..+.++-|..+.+|+.. .+++.+.+|.-. ......|..|.+-|+.|. .-.+.+++++....+..+|++||++.+
T Consensus 21 ~~~~v~GG~i~~a~~~~-~~~~~~FvK~~~-~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~~~ 97 (288)
T PF03881_consen 21 SIEPVSGGDINEAYRLD-TDGGSYFVKVNS-ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLEMG 97 (288)
T ss_dssp EEEEE--SSSSEEEEEE-TTS-EEEEEEEE-GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE-----
T ss_pred eeEecCCCChhheEEEE-CCCccEEEEecC-hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeecCC
Confidence 34568889999999988 477889999776 444567888998888883 345678888877777789999999876
No 483
>PLN02756 S-methyl-5-thioribose kinase
Probab=97.33 E-value=0.082 Score=48.47 Aligned_cols=71 Identities=13% Similarity=0.108 Sum_probs=47.8
Q ss_pred CCeeeecCCeeEEEEEeCCCCEEEEEEcccC-----C----ChhHHHHHHHHhhcCC---CCcceeeeeEEEeCCeEEEE
Q 040826 71 RRFLGRGSAGLVYKGVLPSGQVVAIKHIYKS-----N----NTDSFSREVEGLSRVR---HPNLVCLFGCCVEGGEQYLV 138 (347)
Q Consensus 71 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~-----~----~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv 138 (347)
.+.+|-|....||+.... +..++||.-.+. . ....-..|...|+.+. ..++.+++.++. +..+++
T Consensus 37 ~~eiggGn~N~VyrV~~~-~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~vlv 113 (418)
T PLN02756 37 IKEVGDGNLNFVYIVVSS-SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMALIG 113 (418)
T ss_pred EEEcCCCceeeEEEEEcC-CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCEEE
Confidence 456899999999998874 456889976521 1 2233345566666553 246777777766 346788
Q ss_pred EeecCC
Q 040826 139 YEFCAA 144 (347)
Q Consensus 139 ~e~~~~ 144 (347)
||++++
T Consensus 114 ME~L~~ 119 (418)
T PLN02756 114 MRYLEP 119 (418)
T ss_pred EeecCC
Confidence 999977
No 484
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=97.28 E-value=0.0063 Score=54.28 Aligned_cols=156 Identities=20% Similarity=0.253 Sum_probs=91.1
Q ss_pred ccHHHHHHHhcCcccC-----CeeeecCCeeEEEEEeCCCCEEEEEEcccCCChhHHHHHHHHhhcCCC---Cc---cee
Q 040826 56 FSKDEIENAINNDWDR-----RFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRH---PN---LVC 124 (347)
Q Consensus 56 ~~~~~~~~~~~~~~~~-----~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~h---~n---iv~ 124 (347)
+..++...+...|... ..|.+ .-..+|+....+|+. ++|...+.....+...|...+..+.- += +..
T Consensus 11 ~~~~~~~~~l~~~~~g~~~~~~~l~s-~eN~~f~~~~~~g~~-iLki~~~~~~~~~i~~el~~l~~La~~~i~v~~Pl~~ 88 (331)
T COG2334 11 LTSDEAAAALEAYHYGLDGSLRGLNS-EENSNFRVQTEDGRY-ILKIYRPGWTRAEIPFELALLQHLAERGIPVPAPLPS 88 (331)
T ss_pred cChHHHHHHHHhcCcCcccccccccc-ccCceEEEEecCCCe-EEEEecCCCCHHHHHHHHHHHHHHHHcCCCCCCCccC
Confidence 4445555554444332 33444 567899999877776 89988877556677788888888731 11 111
Q ss_pred eeeEE--EeCC--eEEEEEeecCCCChHH------------Hh---hc--------CC---CCCCHH-------------
Q 040826 125 LFGCC--VEGG--EQYLVYEFCAAGNLAQ------------HL---LR--------KD---SVLTWE------------- 161 (347)
Q Consensus 125 ~~~~~--~~~~--~~~lv~e~~~~gsL~~------------~l---~~--------~~---~~~~~~------------- 161 (347)
.=|-. .-.. ..+-+++|++|..+.. ++ +. .. ....|.
T Consensus 89 ~dG~~l~~~~~~~r~a~lf~~l~G~~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~ 168 (331)
T COG2334 89 LDGELLEALSGGPRPAALFEYLPGRPLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLV 168 (331)
T ss_pred CCcchhhhccCCceeEEEEEecCCcCcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhccc
Confidence 11111 1123 7788999999977662 11 10 00 012222
Q ss_pred ----HHHHHHHHHHHHHHHhhhccCCC---ceeCCCCCCCEEecCCCc-eEEeeccccee
Q 040826 162 ----RRVKILRDCALALRYLHHYIDGC---IVHRDIKLTNILLTEKLE-PKLSDFGLAKM 213 (347)
Q Consensus 162 ----~~~~i~~qi~~~l~~Lh~~~~~~---i~H~dl~p~Nili~~~~~-~kl~dfg~~~~ 213 (347)
.+..+...+......+-.....+ ++|+|+.|.||+++++.. .-+.||+-+..
T Consensus 169 ~~~~l~a~~~~~~~~~~~~~~~~lp~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~~ 228 (331)
T COG2334 169 EPEDLRAALLAALDRLLARLPAHLPALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAGY 228 (331)
T ss_pred CchhhHHHHHHHHHHHHhhchhhCCcccceeeecCCCccceeEcCCCCeeeEEEcccccc
Confidence 22222232333333332222334 999999999999999885 88999987653
No 485
>PLN02236 choline kinase
Probab=97.26 E-value=0.0034 Score=56.67 Aligned_cols=138 Identities=20% Similarity=0.253 Sum_probs=79.1
Q ss_pred CeeeecCCeeEEEEEeCC-----CCEEEEEEcccCCCh-hHHHHHHHHhhcCCCCcce-eeeeEEEeCCeEEEEEeecCC
Q 040826 72 RFLGRGSAGLVYKGVLPS-----GQVVAIKHIYKSNNT-DSFSREVEGLSRVRHPNLV-CLFGCCVEGGEQYLVYEFCAA 144 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~~~-~~~~~e~~~l~~l~h~niv-~~~~~~~~~~~~~lv~e~~~~ 144 (347)
+.+..|-...+|+....+ ++.+++|........ -+-.+|..+++.+...++. ++++.+.. + .|.+|+++
T Consensus 42 ~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~~gl~P~~~~~~~~-g---~v~efi~g 117 (344)
T PLN02236 42 IPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSRHGQGPRLLGRFPN-G---RVEEFIHA 117 (344)
T ss_pred EEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHHcCCCCceEEEECC-c---eEEEeeCC
Confidence 345557888999987543 367889977654321 1235688888888643433 44454432 2 58999987
Q ss_pred CChHHH-----------------hhcCC---C--CCCHHHHHHHHHHH-----------------HHHHHHhhh-----c
Q 040826 145 GNLAQH-----------------LLRKD---S--VLTWERRVKILRDC-----------------ALALRYLHH-----Y 180 (347)
Q Consensus 145 gsL~~~-----------------l~~~~---~--~~~~~~~~~i~~qi-----------------~~~l~~Lh~-----~ 180 (347)
.++... +++.. . ...+....++..++ ...+..|.. .
T Consensus 118 ~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~~ 197 (344)
T PLN02236 118 RTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGDD 197 (344)
T ss_pred CCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcccC
Confidence 665421 11111 0 11122333332221 111112211 1
Q ss_pred cCCCceeCCCCCCCEEecC-CCceEEeeccccee
Q 040826 181 IDGCIVHRDIKLTNILLTE-KLEPKLSDFGLAKM 213 (347)
Q Consensus 181 ~~~~i~H~dl~p~Nili~~-~~~~kl~dfg~~~~ 213 (347)
....++|+|+++.||++++ ++.+.++||..+..
T Consensus 198 ~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~ 231 (344)
T PLN02236 198 QEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY 231 (344)
T ss_pred CCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence 1346899999999999986 46899999987764
No 486
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=97.06 E-value=0.0014 Score=60.63 Aligned_cols=70 Identities=16% Similarity=0.130 Sum_probs=46.5
Q ss_pred EEEEeCCCCEEEEEEcccCCChhHHHHHHHHhhcCCCCcceeeeeEEEe-CCeEEEEEeecCCCChHHHhhcC
Q 040826 83 YKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVE-GGEQYLVYEFCAAGNLAQHLLRK 154 (347)
Q Consensus 83 ~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~ 154 (347)
+.|....|..+ ..-+.-..+...+.-..+.++.+.|+|....+.+... .....+|+|++.. ||.+.+...
T Consensus 6 ~~a~~~~~~~c-~nglplt~~s~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~~~-Sled~~~~~ 76 (725)
T KOG1093|consen 6 FFAQEKPGDVC-SNGLPLTPNSIQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHYTM-SLEDILKTG 76 (725)
T ss_pred EehhcCCCccc-cCCCcCCCcHHHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhhcc-chHHHHHhc
Confidence 44444444433 3223333445566777888999999999998887654 3357889999865 999987543
No 487
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=97.05 E-value=0.0044 Score=51.22 Aligned_cols=113 Identities=17% Similarity=0.094 Sum_probs=73.2
Q ss_pred cCCeeEEEEEeCCCCEEEEEEcccC-C--ChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCCCChHHHhhc
Q 040826 77 GSAGLVYKGVLPSGQVVAIKHIYKS-N--NTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAAGNLAQHLLR 153 (347)
Q Consensus 77 G~~g~V~~~~~~~~~~vavK~~~~~-~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 153 (347)
++.++.-.+..+-|. ..+|++.+. . ....|..+.+++.+++ .|+++.. .+...+.++.|+|......
T Consensus 73 ~gNsTl~~~kt~iG~-L~lKKi~slp~~~~~~~y~nky~v~Armh--GilrL~N--Dn~~~yGvIlE~Cy~~~i~----- 142 (308)
T PF07387_consen 73 NGNSTLLIGKTKIGP-LFLKKIRSLPCCINDALYFNKYRVFARMH--GILRLKN--DNNYKYGVILERCYKIKIN----- 142 (308)
T ss_pred CCceEEEEeccccch-hhhhhccCCCcccchhhhhhhhhHHHHhh--heeEeec--CCCceeEEEEeeccCcccc-----
Confidence 444555555543344 345555443 2 2345778888988887 5777763 2444677899998653211
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCCCceEEeecc
Q 040826 154 KDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEKLEPKLSDFG 209 (347)
Q Consensus 154 ~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~~~~kl~dfg 209 (347)
.. -.+.++ ..+|.-.|+. +.+.+|+|-.|+|||-|..|.+||.|-+
T Consensus 143 -----~~---N~i~ag-i~~L~~fH~~-~~~~lHGD~np~NiM~D~~G~lKlVDP~ 188 (308)
T PF07387_consen 143 -----FS---NFITAG-IKDLMDFHSE-NQHCLHGDCNPDNIMCDKFGYLKLVDPV 188 (308)
T ss_pred -----hh---HHHHHh-HHHHHHhhcc-CCCeecCCCChhheeecCCCCEEecChh
Confidence 00 111221 3567777865 5789999999999999999999999965
No 488
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=97.01 E-value=0.011 Score=52.68 Aligned_cols=30 Identities=30% Similarity=0.365 Sum_probs=25.9
Q ss_pred CCCceeCCCCCCCEEecCCCceEEeecccce
Q 040826 182 DGCIVHRDIKLTNILLTEKLEPKLSDFGLAK 212 (347)
Q Consensus 182 ~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~ 212 (347)
..+++|+|+.+.|++++. +.+.++||+.+.
T Consensus 186 ~~~liHgD~~~~Nil~~~-~~i~lIDfd~~~ 215 (313)
T TIGR02906 186 IRGFCHQDYAYHNILLKD-NEVYVIDFDYCT 215 (313)
T ss_pred cCceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence 367899999999999998 678999998655
No 489
>PRK12396 5-methylribose kinase; Reviewed
Probab=97.00 E-value=0.059 Score=49.13 Aligned_cols=71 Identities=15% Similarity=0.137 Sum_probs=46.3
Q ss_pred CeeeecCCeeEEEEEeCC-CCEEEEEEcccC--------CChhHHHHHHHHhhcCC--CCc-ceeeeeEEEeCCeEEEEE
Q 040826 72 RFLGRGSAGLVYKGVLPS-GQVVAIKHIYKS--------NNTDSFSREVEGLSRVR--HPN-LVCLFGCCVEGGEQYLVY 139 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~--------~~~~~~~~e~~~l~~l~--h~n-iv~~~~~~~~~~~~~lv~ 139 (347)
+.||-|.-.-||++...+ +..|+||.-.+. -..+...-|.+.|+... .|. +.+++. .+.....+||
T Consensus 35 ~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~--~D~e~~~~vM 112 (409)
T PRK12396 35 KEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYL--FDSVMNCCVM 112 (409)
T ss_pred eEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEE--ECcHHhhHHH
Confidence 468999999999999753 567999865321 12234566777877764 443 444443 3344566788
Q ss_pred eecCC
Q 040826 140 EFCAA 144 (347)
Q Consensus 140 e~~~~ 144 (347)
|+++.
T Consensus 113 EdL~~ 117 (409)
T PRK12396 113 EDLSD 117 (409)
T ss_pred HhCcc
Confidence 88854
No 490
>PRK11768 serine/threonine protein kinase; Provisional
Probab=96.97 E-value=0.093 Score=47.05 Aligned_cols=94 Identities=15% Similarity=0.097 Sum_probs=57.3
Q ss_pred cccccHHHHHHHhcCcccC---C-eeeecCCeeEEEEEeCCCCEEEEEEcccCC-ChhHHHHHHHHhhcCCCCc--cee-
Q 040826 53 LYRFSKDEIENAINNDWDR---R-FLGRGSAGLVYKGVLPSGQVVAIKHIYKSN-NTDSFSREVEGLSRVRHPN--LVC- 124 (347)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~---~-~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~h~n--iv~- 124 (347)
...++.+.+..+...+... + ..=.+.-..||+....+|..+++|...+.. .......|.+.+..+.... ++.
T Consensus 8 ~~~l~p~~~~~a~~~~g~~~~~~~~~l~s~eN~vy~v~~~~~~~~vlKv~r~~~~~~~~i~~E~~~l~~L~~~gipv~~p 87 (325)
T PRK11768 8 FQTLTPDLILDALESLGLRVDGRLLALNSYENRVYQFGDEDGRRVVAKFYRPERWSDAQILEEHAFALELAEAEIPVVAP 87 (325)
T ss_pred CCCCChHHHHHHHHHcCCCCccceEeeccccceEEEEecCCCCEEEEEEcCcccCCHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 4456777777766555332 1 112345667999998788889999886543 4456677887777663211 121
Q ss_pred --eee--EEEeCCeEEEEEeecCCCC
Q 040826 125 --LFG--CCVEGGEQYLVYEFCAAGN 146 (347)
Q Consensus 125 --~~~--~~~~~~~~~lv~e~~~~gs 146 (347)
.-| +...++..+.++++.+|..
T Consensus 88 ~~~~G~~~~~~~g~~~~l~~~~~G~~ 113 (325)
T PRK11768 88 LAFNGQTLHEHQGFRFALFPRRGGRA 113 (325)
T ss_pred ccCCCCEEEEECCEEEEEEeeeCCCC
Confidence 112 1223456788999998764
No 491
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.97 E-value=0.0074 Score=54.20 Aligned_cols=138 Identities=16% Similarity=0.211 Sum_probs=77.2
Q ss_pred CeeeecCCeeEEEEEeCC----CCEEEEEEcccCCCh-hHHHHHHHHhhcCCCCcce-eeeeEEEeCCeEEEEEeecCCC
Q 040826 72 RFLGRGSAGLVYKGVLPS----GQVVAIKHIYKSNNT-DSFSREVEGLSRVRHPNLV-CLFGCCVEGGEQYLVYEFCAAG 145 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~-~~~~~e~~~l~~l~h~niv-~~~~~~~~~~~~~lv~e~~~~g 145 (347)
+.|..|-...+|+....+ +..|++|........ -+-.+|..+++.+...++. ++++++. ++ ++.+|+++.
T Consensus 20 ~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~IdR~~E~~il~~l~~~gl~P~~l~~~~-~G---~i~~fi~g~ 95 (330)
T PLN02421 20 ERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVIDRERELQAIKYLSAAGFGAKLLGVFG-NG---MIQSFINAR 95 (330)
T ss_pred EEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCeEechHHHHHHHHHHHhcCCCCceeEEeC-Cc---EeehhhcCC
Confidence 345557778889887543 237889977554321 1234788888888654443 3444432 22 589999876
Q ss_pred ChHH-------Hh----------hcCC----C-CCCHHHHHHHHHHH----------------------HHHHHHhhhc-
Q 040826 146 NLAQ-------HL----------LRKD----S-VLTWERRVKILRDC----------------------ALALRYLHHY- 180 (347)
Q Consensus 146 sL~~-------~l----------~~~~----~-~~~~~~~~~i~~qi----------------------~~~l~~Lh~~- 180 (347)
+|.. .+ +... . .-.+..+.++..++ .+-+..+...
T Consensus 96 ~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 175 (330)
T PLN02421 96 TLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIVELKEIT 175 (330)
T ss_pred CCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHHHHHHHh
Confidence 5522 01 1111 0 11223332322221 1111111110
Q ss_pred ----cCCCceeCCCCCCCEEecC-CCceEEeeccccee
Q 040826 181 ----IDGCIVHRDIKLTNILLTE-KLEPKLSDFGLAKM 213 (347)
Q Consensus 181 ----~~~~i~H~dl~p~Nili~~-~~~~kl~dfg~~~~ 213 (347)
...-++|+|+.+.||++++ ++.++++||..+..
T Consensus 176 ~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~ 213 (330)
T PLN02421 176 DSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSY 213 (330)
T ss_pred ccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence 0124799999999999975 56899999987764
No 492
>PRK06148 hypothetical protein; Provisional
Probab=96.91 E-value=0.013 Score=60.59 Aligned_cols=157 Identities=19% Similarity=0.240 Sum_probs=87.8
Q ss_pred cccHHHHHHHh-cCcccC---CeeeecCCeeEEEEEeCCCCEEEEEEcccCCChhHHHHHHHHhhcCC-------CCcce
Q 040826 55 RFSKDEIENAI-NNDWDR---RFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVR-------HPNLV 123 (347)
Q Consensus 55 ~~~~~~~~~~~-~~~~~~---~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~-------h~niv 123 (347)
.++.+++.... +.|... +.|+ |..-.+|+....+|..+++|+............|...+..+. -|.++
T Consensus 10 ~~s~~~~~~~~~~~ygl~~~~~~L~-s~~d~nf~v~~~~g~~yVLKi~~~~~~~~~~~~q~~~L~hL~~~~~glpvP~~i 88 (1013)
T PRK06148 10 EFTTKDAEALLAQHFGISATATPLD-GERDLNFRLTTDDGADYILKIVNPSEPRVESDFQTAALDHLAAVAPDLPVPRLI 88 (1013)
T ss_pred CCCHHHHHHHHHHHcCCceEEeecC-CcCCceEEEEeCCCCeEEEEEcCCccchhHHHHHHHHHHHHHhhCCCCCcCeee
Confidence 35555554432 333322 4454 456788999887888999999987655545555556665442 23333
Q ss_pred eee-e----EEEe-CC--eEEEEEeecCCCChHHH--------------h---hc------C---CCCCCHH--------
Q 040826 124 CLF-G----CCVE-GG--EQYLVYEFCAAGNLAQH--------------L---LR------K---DSVLTWE-------- 161 (347)
Q Consensus 124 ~~~-~----~~~~-~~--~~~lv~e~~~~gsL~~~--------------l---~~------~---~~~~~~~-------- 161 (347)
+.. | .... ++ ..+-+++|.+|..+.+. + .. . ...+.|.
T Consensus 89 ~t~~G~~~~~v~~~~G~~~~vrLl~~l~G~~l~~~~~~t~~~~~~lG~~larlh~al~~F~~p~~~r~~~Wdl~~~~~l~ 168 (1013)
T PRK06148 89 PSLSGASLASAQDPDGEPRLLRLLSWLPGTPLAEAAPRTEALLDNLGRALGRLDRALQGFMHPGALRDLDWDLRHAGRAR 168 (1013)
T ss_pred ecCCCCeEEEeecCCCceEEEEEEeccCCCcHHhccCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccccchhhh
Confidence 322 1 1111 22 45678999999776541 0 00 0 0111121
Q ss_pred ---------HHHHHHHHHHHHHH-----HhhhccCCCceeCCCCCCCEEecCCC--ceE-Eeeccccee
Q 040826 162 ---------RRVKILRDCALALR-----YLHHYIDGCIVHRDIKLTNILLTEKL--EPK-LSDFGLAKM 213 (347)
Q Consensus 162 ---------~~~~i~~qi~~~l~-----~Lh~~~~~~i~H~dl~p~Nili~~~~--~~k-l~dfg~~~~ 213 (347)
....++.++.+... .+.+ ...+++|+|+++.||+++.++ .+. |+|||.+..
T Consensus 169 ~~l~~i~d~~~r~~l~~~~~~~~~~v~p~l~~-Lp~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~ 236 (1013)
T PRK06148 169 DRLHFIDDPEDRALVERFLARFERNVAPRLAA-LPAQVIHNDANDYNILVDADDGERISGLIDFGDAVH 236 (1013)
T ss_pred hhhhhcCCHHHHHHHHHHHHHHHHHHHHHHhc-CCcceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence 11222223333222 1221 246799999999999999875 555 999997764
No 493
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=96.80 E-value=0.025 Score=50.34 Aligned_cols=32 Identities=22% Similarity=0.340 Sum_probs=28.5
Q ss_pred CCCceeCCCCCCCEEecCCCceEEeeccccee
Q 040826 182 DGCIVHRDIKLTNILLTEKLEPKLSDFGLAKM 213 (347)
Q Consensus 182 ~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~ 213 (347)
..+++|+|+.++|+++++++.+.++||..+..
T Consensus 195 ~~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~ 226 (309)
T TIGR02904 195 RTVLVHGKLSLSHFLYDETRGGYFINFEKASF 226 (309)
T ss_pred ceeeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence 45899999999999999999999999987764
No 494
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=96.46 E-value=0.0098 Score=53.70 Aligned_cols=63 Identities=17% Similarity=0.092 Sum_probs=42.1
Q ss_pred eEEEEEeecCCCChHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCceeCCCCCCCEEecCC
Q 040826 134 EQYLVYEFCAAGNLAQHLLRKDSVLTWERRVKILRDCALALRYLHHYIDGCIVHRDIKLTNILLTEK 200 (347)
Q Consensus 134 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~Lh~~~~~~i~H~dl~p~Nili~~~ 200 (347)
...++=+|.+|.++..++....+ ++....+++.-.++|+-.+-- -.+++|.|++|.||++..+
T Consensus 319 ~~vl~E~~~~Gl~v~~~v~~~~~--pe~l~kkva~lg~~AllkMl~--vDNFvHaDlHPGNVlirf~ 381 (565)
T KOG1236|consen 319 DLVLVETYERGLSVLRFVKWKSQ--PEALVKKVAKLGVNALLKMLI--VDNFVHADLHPGNVLIRFN 381 (565)
T ss_pred cceeeeeccccccHHhhhhcccC--hHHHHHHHHHHHHHHHHHHHH--hhcceecccCCCcEEEEec
Confidence 34567778888899888865543 334455555555555443321 4589999999999999643
No 495
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=96.37 E-value=0.73 Score=41.63 Aligned_cols=71 Identities=20% Similarity=0.189 Sum_probs=45.8
Q ss_pred eeeecCCeeEEEEEeCCC-CEEEEEEcccC---------CChhHHHHHHHHhhcCC--CCc-ceeeeeEEEeCCeEEEEE
Q 040826 73 FLGRGSAGLVYKGVLPSG-QVVAIKHIYKS---------NNTDSFSREVEGLSRVR--HPN-LVCLFGCCVEGGEQYLVY 139 (347)
Q Consensus 73 ~lg~G~~g~V~~~~~~~~-~~vavK~~~~~---------~~~~~~~~e~~~l~~l~--h~n-iv~~~~~~~~~~~~~lv~ 139 (347)
.+|-|...-||++..++| +.++||.-.+. -......-|...|+... .|. +.+++. .+.....++|
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~--~D~e~~~~vM 79 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFH--FDTEMAVTVM 79 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEE--EccccceehH
Confidence 478899999999997654 58999965321 11234556777777664 343 334443 3444566899
Q ss_pred eecCCC
Q 040826 140 EFCAAG 145 (347)
Q Consensus 140 e~~~~g 145 (347)
|+++..
T Consensus 80 EdL~~~ 85 (370)
T TIGR01767 80 EDLSHH 85 (370)
T ss_pred hhCccc
Confidence 998653
No 496
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=96.13 E-value=0.00067 Score=70.05 Aligned_cols=158 Identities=16% Similarity=0.071 Sum_probs=108.8
Q ss_pred HHHHHHHhhcCCCCcceeeeeEEEe--CCeEEEEEeecCCCChHHHhhcCC---CCCCHHHHHHHHHHHHHHHHHhhhcc
Q 040826 107 FSREVEGLSRVRHPNLVCLFGCCVE--GGEQYLVYEFCAAGNLAQHLLRKD---SVLTWERRVKILRDCALALRYLHHYI 181 (347)
Q Consensus 107 ~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~Lh~~~ 181 (347)
...|.+.++...|+++.....-... ....+..++|+.+|.+.+.+.++. +.+...-......+......-+|...
T Consensus 1276 ll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~t 1355 (2724)
T KOG1826|consen 1276 LLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLT 1355 (2724)
T ss_pred hhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcc
Confidence 3344445566678877766554433 335678899999999999886532 22333333333333344444444322
Q ss_pred --CCCceeCCCCCCCEEecCCCceEEeecccceecCCCccceeecccCCCCccccccccCCccCCcccHHHHHHHHHHHH
Q 040826 182 --DGCIVHRDIKLTNILLTEKLEPKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMTNAKLTCASDIYSFGIVALQLL 259 (347)
Q Consensus 182 --~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~ll 259 (347)
+.-.+|+++++-|.+|..+-+++++++|+.+... ......+...+++.|+.|+....-.++.++|+|..|+-+|...
T Consensus 1356 nlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIkn-p~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs 1434 (2724)
T KOG1826|consen 1356 NLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKN-PVLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRS 1434 (2724)
T ss_pred cCCccchhhhhhhhccceecCCcccccccccccccC-chHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHh
Confidence 3347899999999999999999999999998322 2222234456778889999888888888899999999999998
Q ss_pred hCCCCc
Q 040826 260 SGQKVI 265 (347)
Q Consensus 260 tg~~p~ 265 (347)
.|..+|
T Consensus 1435 ~~n~~f 1440 (2724)
T KOG1826|consen 1435 DGNAYF 1440 (2724)
T ss_pred cccHHH
Confidence 887665
No 497
>PTZ00384 choline kinase; Provisional
Probab=96.03 E-value=0.076 Score=48.61 Aligned_cols=73 Identities=16% Similarity=0.224 Sum_probs=43.2
Q ss_pred CeeeecCCeeEEEEEeCCC--CE-----EEEEEcccCCC-hhHHHHHHHHhhcCCCCccee-eeeEEEeCCeEEEEEeec
Q 040826 72 RFLGRGSAGLVYKGVLPSG--QV-----VAIKHIYKSNN-TDSFSREVEGLSRVRHPNLVC-LFGCCVEGGEQYLVYEFC 142 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~~~--~~-----vavK~~~~~~~-~~~~~~e~~~l~~l~h~niv~-~~~~~~~~~~~~lv~e~~ 142 (347)
+.+..|-...+|++...++ .. |+++....... .-+-.+|..+++.+...++.+ +++.+.. +++.||+
T Consensus 56 ~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~IdR~~E~~i~~~Ls~~glgP~l~~~f~~----g~l~efI 131 (383)
T PTZ00384 56 KKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVIDNDLQYNIAKLLGDNNFGPKIIGRFGD----FTIQEWV 131 (383)
T ss_pred EEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEeccHHHHHHHHHHHhCCCCCeEEEecCC----EEEEEEe
Confidence 4555688889999985433 22 44443322111 112346888888887555444 4444432 5899999
Q ss_pred CCCChH
Q 040826 143 AAGNLA 148 (347)
Q Consensus 143 ~~gsL~ 148 (347)
+|.+|.
T Consensus 132 eGr~l~ 137 (383)
T PTZ00384 132 EGNTMG 137 (383)
T ss_pred ccccCC
Confidence 987653
No 498
>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []. Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process
Probab=96.01 E-value=0.063 Score=46.03 Aligned_cols=78 Identities=18% Similarity=0.065 Sum_probs=54.2
Q ss_pred CeeeecCCeeEEEEEeCCCCEEEEEEcccCCChhHHHHHHHHhhcCCCCcceeeeeEEEeCCeEEEEEeecCC-CChHHH
Q 040826 72 RFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVRHPNLVCLFGCCVEGGEQYLVYEFCAA-GNLAQH 150 (347)
Q Consensus 72 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~-gsL~~~ 150 (347)
..+..|..+.|+.+...+|...++|...+......-......|+..+-...+++++.- ...-.+++|...+ .+|.+.
T Consensus 8 ~~~~~g~~s~V~pv~~~dG~~avLKl~~p~~~~~~E~~g~~~L~~w~G~GaVrll~~d--~~~~AlLLErl~~g~~L~~~ 85 (253)
T PF04655_consen 8 GPPAHGSSSLVVPVRRADGTPAVLKLAPPHAEAEHEARGEAALRWWNGRGAVRLLAAD--PERGALLLERLDPGRSLASL 85 (253)
T ss_pred CCCCCCcceEEEEEEcCCCCeEEEEecCCcccchhhhhHHhHhheeCCCCceeeeccc--cccchhhhhhccCCCchhhc
Confidence 3466799999999999999999999987665533222223457777766778888754 3355788899844 466544
Q ss_pred h
Q 040826 151 L 151 (347)
Q Consensus 151 l 151 (347)
.
T Consensus 86 ~ 86 (253)
T PF04655_consen 86 P 86 (253)
T ss_pred c
Confidence 3
No 499
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=95.85 E-value=0.0041 Score=46.74 Aligned_cols=46 Identities=22% Similarity=0.226 Sum_probs=35.1
Q ss_pred CCeeeecCCeeEEEEEeCCCCEEEEEEcccCCChhHHHHHHHHhhcC
Q 040826 71 RRFLGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRV 117 (347)
Q Consensus 71 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l 117 (347)
.++||.|+.|+||+|++++|+.||||+..+.- ...+...+.+++.+
T Consensus 16 ~~PlasASiaQVh~a~l~~g~~VaVKV~rP~i-~~~i~~Dl~~l~~~ 61 (119)
T PF03109_consen 16 PEPLASASIAQVHRARLKDGEEVAVKVQRPGI-EEQIEADLRILRRL 61 (119)
T ss_pred cchhhheehhhheeeeecccchhhhhhcchHH-HHHHHHHHHHHHHH
Confidence 46899999999999999999999999876543 33445555555543
No 500
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.72 E-value=0.13 Score=43.04 Aligned_cols=73 Identities=16% Similarity=0.232 Sum_probs=47.7
Q ss_pred eeecCCeeEEEEEeCCCCEEEEEEcccCCChhHHHHHHHHhhcCC---CCcceeeeeEEEeCCeEEEEEeecCCCChH
Q 040826 74 LGRGSAGLVYKGVLPSGQVVAIKHIYKSNNTDSFSREVEGLSRVR---HPNLVCLFGCCVEGGEQYLVYEFCAAGNLA 148 (347)
Q Consensus 74 lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 148 (347)
+.-|.....|...+ +...+-+|+-. ......|..|+.-|+.+. --++.+++.+-.+.+..++|+||.+-+.+.
T Consensus 24 v~gG~inea~~v~d-g~~~~FvK~n~-~~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~~~~d 99 (286)
T COG3001 24 VSGGDINEAWRLRD-GTDPFFVKCNQ-REQLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPTGPLD 99 (286)
T ss_pred cCCccccceeEeec-CCcceEEEecc-hhhHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccCCCCC
Confidence 44344444444443 45678888542 233456778887776664 345677777777888999999999987665
Done!