BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040835
(206 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225450193|ref|XP_002264293.1| PREDICTED: ras-related protein RGP1 [Vitis vinifera]
gi|297736218|emb|CBI24856.3| unnamed protein product [Vitis vinifera]
Length = 226
Score = 364 bits (934), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 175/206 (84%), Positives = 190/206 (92%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQLLARFAR+EF+LDSKATIGVEFQTKTLVI HK VKAQIWDTAGQERYRA
Sbjct: 21 LIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTKTLVIDHKTVKAQIWDTAGQERYRA 80
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYDITKRQSFD+VARWL+ELRGHADKNI+IMLVGNKSDL TL+AVP
Sbjct: 81 VTSAYYRGAVGAMLVYDITKRQSFDHVARWLQELRGHADKNIVIMLVGNKSDLGTLQAVP 140
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFAE+E L FMETSALE+TNVE AFL+VLTEIYRI+SKK L AN+E ESGG+SSL
Sbjct: 141 TEDAKEFAERENLFFMETSALEATNVETAFLSVLTEIYRIISKKTLVANEEVESGGNSSL 200
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
LK T I+VPG+EP+S YNCC SS
Sbjct: 201 LKGTKIIVPGKEPKSEGSKYNCCLSS 226
>gi|224055257|ref|XP_002298447.1| predicted protein [Populus trichocarpa]
gi|222845705|gb|EEE83252.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 362 bits (929), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 177/206 (85%), Positives = 190/206 (92%), Gaps = 1/206 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQLLARFAR+EFSLDSKATIGVEFQTKTLVI HK VKAQIWDTAGQERYRA
Sbjct: 21 LIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTKTLVIDHKTVKAQIWDTAGQERYRA 80
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYDITKRQSFD+VA+WLEELR HAD NI+IML+GNKSDL TLRAVP
Sbjct: 81 VTSAYYRGAVGAMLVYDITKRQSFDHVAKWLEELRDHADNNIVIMLIGNKSDLGTLRAVP 140
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFA+KE L FMETSALE+TNVE AFL+VLTEIYR++SKKAL AN E ESGGSSSL
Sbjct: 141 TEDAKEFAQKENLFFMETSALEATNVESAFLSVLTEIYRVISKKALIAN-EQESGGSSSL 199
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
LK TNIVVP QEP SG RS++CC +S
Sbjct: 200 LKGTNIVVPEQEPVSGGRSFSCCGTS 225
>gi|449463769|ref|XP_004149604.1| PREDICTED: ras-related protein RABA4c-like [Cucumis sativus]
Length = 222
Score = 347 bits (891), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 166/205 (80%), Positives = 185/205 (90%), Gaps = 2/205 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQLL+RFAR+EFSLDSKATIGVEFQTKTL I K +KAQIWDTAGQERYRA
Sbjct: 20 LIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNIDQKAIKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYD+TKRQ+FD++ARWLEELRGHADKNI+IML+GNKSDL +LR VP
Sbjct: 80 VTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVP 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFA+ E L FMETSALE+TNVE AF T+LTEIYR++SKKAL ANDE++SGGSSSL
Sbjct: 140 TEDAKEFAQMENLSFMETSALEATNVEAAFNTILTEIYRVISKKALIANDETDSGGSSSL 199
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
LK T IVVPGQEP++ S CC S
Sbjct: 200 LKGTKIVVPGQEPQAA--SSGCCRS 222
>gi|449530588|ref|XP_004172276.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA4c-like
[Cucumis sativus]
Length = 222
Score = 345 bits (885), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 165/205 (80%), Positives = 184/205 (89%), Gaps = 2/205 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQLL+RFAR+EFSLDSKATIGVEFQTKTL I K +KAQIWDTAGQERYRA
Sbjct: 20 LIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNIDQKAIKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYD+TKRQ+FD++ARWLEELRGHADKNI+IML+GNKSDL +LR VP
Sbjct: 80 VTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRGHADKNIVIMLIGNKSDLGSLRVVP 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFA+ E L FMETSALE+TNVE AF T+LTEIYR++SKKAL ANDE++SGGSSSL
Sbjct: 140 TEDAKEFAQMENLSFMETSALEATNVEAAFNTILTEIYRVISKKALIANDETDSGGSSSL 199
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
LK T VVPGQEP++ S CC S
Sbjct: 200 LKGTKXVVPGQEPQAA--SSGCCRS 222
>gi|255544246|ref|XP_002513185.1| protein with unknown function [Ricinus communis]
gi|223547683|gb|EEF49176.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 344 bits (882), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 165/206 (80%), Positives = 185/206 (89%), Gaps = 2/206 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQLLARFAR+EF+LDSKATIGVEFQTKT+V+ HK VKAQIWDTAGQERYRA
Sbjct: 20 LIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTKTIVVDHKTVKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYDITKRQSFD+VA+WLEELR HAD NI+IMLVGNKSDLE+LRAVP
Sbjct: 80 VTSAYYRGAVGAMLVYDITKRQSFDHVAKWLEELREHADNNIVIMLVGNKSDLESLRAVP 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
EDAKEFA+KE L FMETSALE+TNVE AF++VLTEIYR+VSKK+L AND E GG++SL
Sbjct: 140 IEDAKEFAQKENLFFMETSALEATNVESAFISVLTEIYRVVSKKSLVAND--EYGGNNSL 197
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
LK IV+PGQEPE + +CC+ S
Sbjct: 198 LKGNKIVIPGQEPEMQATNSSCCSRS 223
>gi|109940137|sp|P25766.2|RGP1_ORYSJ RecName: Full=Ras-related protein RGP1; AltName: Full=GTP-binding
regulatory protein RGP1
gi|50251643|dbj|BAD29646.1| putative ras-related GTP-binding protein [Oryza sativa Japonica
Group]
gi|222641214|gb|EEE69346.1| hypothetical protein OsJ_28668 [Oryza sativa Japonica Group]
Length = 226
Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 169/205 (82%), Positives = 184/205 (89%), Gaps = 1/205 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQLLARFAR+EF+LDSKATIGVEFQT+TL I + VKAQIWDTAGQERYRA
Sbjct: 23 LIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQIWDTAGQERYRA 82
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYDITKRQSFD+VARWLEELRGHADKNI+IML+GNKSDL TLR VP
Sbjct: 83 VTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLRVVP 142
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFAE+E L FMETSALESTNVE AF+TVLTEIYRIVSKK L AN+E +S G+SSL
Sbjct: 143 TEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKNLVANEEVDSSGNSSL 202
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
LK T IVVPGQEP ++ +CC S
Sbjct: 203 LKGTKIVVPGQEPAPPTKA-SCCMS 226
>gi|414589235|tpg|DAA39806.1| TPA: ras protein RGP1 [Zea mays]
Length = 226
Score = 342 bits (876), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 168/206 (81%), Positives = 184/206 (89%), Gaps = 1/206 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQLLARFAR++F+LDSKATIGVEFQT+TL I +NVKAQIWDTAGQERYRA
Sbjct: 22 LIGDSAVGKSQLLARFARNQFNLDSKATIGVEFQTRTLNIDARNVKAQIWDTAGQERYRA 81
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYDITKRQSFD+VARWLEELRGHADKNI+IML+GNKSDL TLRAVP
Sbjct: 82 VTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLMGNKSDLGTLRAVP 141
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
EDAKEFAE+E L FMETSALE+ NVE AF+TVLTEIYR VSKK L AN+E +S G+SSL
Sbjct: 142 IEDAKEFAERENLFFMETSALEAINVENAFMTVLTEIYRTVSKKNLVANEEPDSSGNSSL 201
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
LK T IVVPGQEP S ++ CC SS
Sbjct: 202 LKGTKIVVPGQEPPSTLKA-TCCMSS 226
>gi|242044174|ref|XP_002459958.1| hypothetical protein SORBIDRAFT_02g018890 [Sorghum bicolor]
gi|241923335|gb|EER96479.1| hypothetical protein SORBIDRAFT_02g018890 [Sorghum bicolor]
Length = 226
Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 167/206 (81%), Positives = 184/206 (89%), Gaps = 1/206 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQLLARFAR+EF+LDSKATIGVEFQT+TL I + VKAQIWDTAGQERYRA
Sbjct: 22 LIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLNIDARTVKAQIWDTAGQERYRA 81
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYDITKRQSFD+VARWLEELRGHADKNI+IML+GNKSDL TLR+V
Sbjct: 82 VTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLRSVA 141
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFAE+E L FMETSALE+ NVE AF+TVLTEIYR+VSKK L AN+ES+S G+SSL
Sbjct: 142 TEDAKEFAERENLFFMETSALEAVNVENAFMTVLTEIYRVVSKKNLVANEESDSSGNSSL 201
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
LK T IVVPGQEP ++ CC SS
Sbjct: 202 LKGTKIVVPGQEPPPTSKA-TCCMSS 226
>gi|297791923|ref|XP_002863846.1| small molecular weight G-protein 1 [Arabidopsis lyrata subsp.
lyrata]
gi|297309681|gb|EFH40105.1| small molecular weight G-protein 1 [Arabidopsis lyrata subsp.
lyrata]
Length = 223
Score = 339 bits (869), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 165/206 (80%), Positives = 184/206 (89%), Gaps = 2/206 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQLLARF+R+EFS++SKATIGVEFQT+TL I HK +KAQIWDTAGQERYRA
Sbjct: 20 LIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDHKTIKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYDITKRQSFD+VARWLEELRGHADKNI+IML+GNK+DL TLRAVP
Sbjct: 80 VTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKTDLGTLRAVP 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFA++E L FMETSAL+S NVE +FLTVLTEIYRIVSKK L AN+E ESGG SSL
Sbjct: 140 TEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIVSKKNLVANEEGESGGDSSL 199
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
L+ T IVV G+E ES + CC +S
Sbjct: 200 LQGTKIVVAGEETES--KGKGCCGTS 223
>gi|226531496|ref|NP_001146862.1| LOC100280470 [Zea mays]
gi|195604390|gb|ACG24025.1| ras-related protein RGP1 [Zea mays]
Length = 226
Score = 338 bits (868), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 167/206 (81%), Positives = 183/206 (88%), Gaps = 1/206 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSA GKSQLLARFAR++F+LDSKATIGVEFQT+TL I +NVKAQIWDTAGQERYRA
Sbjct: 22 LIGDSAGGKSQLLARFARNQFNLDSKATIGVEFQTRTLNIDARNVKAQIWDTAGQERYRA 81
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYDITKRQSFD+VARWLEELRGHADKNI+IML+GNKSDL TLRAVP
Sbjct: 82 VTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLMGNKSDLGTLRAVP 141
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
EDAKEFAE+E L FMETSALE+ NVE AF+TVLTEIYR VSKK L AN+E +S G+SSL
Sbjct: 142 IEDAKEFAERENLFFMETSALEAINVENAFMTVLTEIYRTVSKKNLVANEEPDSSGNSSL 201
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
LK T IVVPGQEP S ++ CC SS
Sbjct: 202 LKGTKIVVPGQEPPSTLKA-TCCMSS 226
>gi|225441694|ref|XP_002282798.1| PREDICTED: ras-related protein RABA4d [Vitis vinifera]
gi|147789804|emb|CAN62934.1| hypothetical protein VITISV_008844 [Vitis vinifera]
gi|297739720|emb|CBI29902.3| unnamed protein product [Vitis vinifera]
Length = 223
Score = 336 bits (862), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 162/205 (79%), Positives = 184/205 (89%), Gaps = 1/205 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQLLARFAR+EF++DSKATIGVEFQTKTL I K VKAQIWDTAGQERYRA
Sbjct: 20 LIGDSAVGKSQLLARFARNEFNVDSKATIGVEFQTKTLAIDQKAVKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYD+TKRQSFD++ARWLEELRGHADKNI+IML+GNKSDL +LRAVP
Sbjct: 80 VTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKSDLGSLRAVP 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA+EFAE+E L FMETSALE+TNVE AFLTVLT+IY+I+SKK LTAN +++S GSS+L
Sbjct: 140 TEDAQEFAERENLFFMETSALEATNVETAFLTVLTDIYKIISKKTLTANTDTDSTGSSTL 199
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
LK T I+VPG P+S + CC S
Sbjct: 200 LKGTKIIVPGG-PDSAAQKGGCCGS 223
>gi|15238852|ref|NP_199607.1| RAB GTPase homolog A4C [Arabidopsis thaliana]
gi|75333691|sp|Q9FE79.1|RAA4C_ARATH RecName: Full=Ras-related protein RABA4c; Short=AtRABA4c; AltName:
Full=Ras-related protein SMG1
gi|12004623|gb|AAG44121.1|AF218121_1 small molecular weight g-protein [Arabidopsis thaliana]
gi|9758522|dbj|BAB09048.1| RAS superfamily GTP-binding protein-like [Arabidopsis thaliana]
gi|89111906|gb|ABD60725.1| At5g47960 [Arabidopsis thaliana]
gi|332008216|gb|AED95599.1| RAB GTPase homolog A4C [Arabidopsis thaliana]
Length = 223
Score = 335 bits (860), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 164/206 (79%), Positives = 183/206 (88%), Gaps = 2/206 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQLLARF+R+EFS++SKATIGVEFQT+TL I K +KAQIWDTAGQERYRA
Sbjct: 20 LIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKTIKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYDITKRQSFD+VARWLEELRGHADKNI+IML+GNK+DL TLRAVP
Sbjct: 80 VTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKTDLGTLRAVP 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFA++E L FMETSAL+S NVE +FLTVLTEIYRIVSKK L AN+E ESGG SSL
Sbjct: 140 TEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIVSKKNLVANEEGESGGDSSL 199
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
L+ T IVV G+E ES + CC +S
Sbjct: 200 LQGTKIVVAGEETES--KGKGCCGTS 223
>gi|449464898|ref|XP_004150166.1| PREDICTED: ras-related protein RABA4d-like [Cucumis sativus]
gi|449476501|ref|XP_004154754.1| PREDICTED: ras-related protein RABA4d-like [Cucumis sativus]
Length = 223
Score = 335 bits (858), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 160/206 (77%), Positives = 184/206 (89%), Gaps = 2/206 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGK+QLLARF+R+EFS+DSKATIGVEFQTKTLVI K VKAQIWDTAGQERYRA
Sbjct: 20 LIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTVKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYD+TKRQSFD++ARWLEELRGHADKNI+IML+GNK DL +LRAVP
Sbjct: 80 VTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVP 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA+EFAE+E L FMETSALESTNVE AF T+LTEIYRI+SKK+L A +E + G + +L
Sbjct: 140 TEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEIDIGSNPAL 199
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
K T+IVVPGQ+ +SGR+ CC +S
Sbjct: 200 FKGTSIVVPGQDQDSGRK--GCCFAS 223
>gi|357157821|ref|XP_003577924.1| PREDICTED: ras-related protein RGP1-like isoform 2 [Brachypodium
distachyon]
Length = 227
Score = 333 bits (855), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 161/206 (78%), Positives = 180/206 (87%), Gaps = 1/206 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQLLARFAR+EFSLDSKATIGVEFQT+TL + + +KAQIWDTAGQERYRA
Sbjct: 23 LIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLQVDQRTIKAQIWDTAGQERYRA 82
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYDITKRQSFD++ARWLEELR HADKN++IML+GNKSDL TLR VP
Sbjct: 83 VTSAYYRGAVGAMLVYDITKRQSFDHMARWLEELRAHADKNLVIMLIGNKSDLGTLRVVP 142
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFA +E L FMETSALE+TNVE AF T LTEIYR VSKK L AN+E++S G+SSL
Sbjct: 143 TEDAKEFAARESLFFMETSALEATNVENAFRTALTEIYRNVSKKNLVANEETDSSGNSSL 202
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
LK T I+VPGQEP ++ CC SS
Sbjct: 203 LKGTKIIVPGQEPAPPAKA-ACCMSS 227
>gi|388498830|gb|AFK37481.1| unknown [Medicago truncatula]
Length = 223
Score = 333 bits (853), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 156/203 (76%), Positives = 181/203 (89%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGK+QLLARF+R++F++DSKATIGVEFQTKTLVI +K VKAQIWDTAGQERYRA
Sbjct: 20 LIGDSAVGKTQLLARFSRNQFNVDSKATIGVEFQTKTLVIDNKTVKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYD+TKRQSFD++ARWLEELRGHAD NI+IML+GNK DL TL+AVP
Sbjct: 80 VTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADTNIVIMLIGNKCDLGTLKAVP 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA+EFA++E L FMETSALESTNVE AFLT+LTEIYR++SKK LTANDE++ GG S L
Sbjct: 140 TEDAQEFAQRENLFFMETSALESTNVETAFLTILTEIYRLISKKTLTANDEADPGGGSGL 199
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
LK T I+VP Q+ + + CC
Sbjct: 200 LKGTRIIVPNQDASAYEKKGGCC 222
>gi|20356|emb|CAA41966.1| GTP-binding protein [Oryza sativa]
gi|228209|prf||1718315A GTP-binding protein
Length = 226
Score = 332 bits (851), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 165/205 (80%), Positives = 181/205 (88%), Gaps = 1/205 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQLLA FAR+EF+LDSKATIGVEFQT+TL I + VKAQ DTAGQERYRA
Sbjct: 23 LIGDSAVGKSQLLAGFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQTRDTAGQERYRA 82
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYDITKRQSFD+VARWLEELRGHADKNI+IML+GNKSDL TLR VP
Sbjct: 83 VTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLRVVP 142
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFAE+E L FMETSALESTN+E AF+TVLTEIYRIVSKK L AN+E +S G+SSL
Sbjct: 143 TEDAKEFAERENLFFMETSALESTNLENAFMTVLTEIYRIVSKKNLVANEEVDSSGNSSL 202
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
LK T IVVPGQEP ++ +CC S
Sbjct: 203 LKGTKIVVPGQEPAPPTKA-SCCMS 226
>gi|357157817|ref|XP_003577923.1| PREDICTED: ras-related protein RGP1-like isoform 1 [Brachypodium
distachyon]
Length = 226
Score = 331 bits (849), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 161/206 (78%), Positives = 180/206 (87%), Gaps = 1/206 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQLLARFAR+EFSLDSKATIGVEFQT+TL + + +KAQIWDTAGQERYRA
Sbjct: 22 LIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLQVDQRTIKAQIWDTAGQERYRA 81
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYDITKRQSFD++ARWLEELR HADKN++IML+GNKSDL TLR VP
Sbjct: 82 VTSAYYRGAVGAMLVYDITKRQSFDHMARWLEELRAHADKNLVIMLIGNKSDLGTLRVVP 141
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFA +E L FMETSALE+TNVE AF T LTEIYR VSKK L AN+E++S G+SSL
Sbjct: 142 TEDAKEFAARESLFFMETSALEATNVENAFRTALTEIYRNVSKKNLVANEETDSSGNSSL 201
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
LK T I+VPGQEP ++ CC SS
Sbjct: 202 LKGTKIIVPGQEPAPPAKA-ACCMSS 226
>gi|255583280|ref|XP_002532404.1| protein with unknown function [Ricinus communis]
gi|223527900|gb|EEF29989.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 331 bits (849), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 159/206 (77%), Positives = 181/206 (87%), Gaps = 1/206 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQLLARFAR+EF +DSKATIGVEFQTKTL I +K VKAQIWDTAGQERYRA
Sbjct: 19 LIGDSAVGKSQLLARFARNEFCVDSKATIGVEFQTKTLSIDNKTVKAQIWDTAGQERYRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYD+TKRQSFD++ARWLEELRGHADKNI+IML+GNK DL +LRAVP
Sbjct: 79 VTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDLGSLRAVP 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
EDA+EFA++E L FMETSALESTNVE AFLTVLTEIYR++SKK LTAN+E ++ G+S L
Sbjct: 139 IEDAQEFAQRENLFFMETSALESTNVETAFLTVLTEIYRVISKKTLTANEELDTNGTSGL 198
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
LK T I+VPG + ++ CC SS
Sbjct: 199 LKGTRIIVPGHDQAPAKKG-GCCMSS 223
>gi|356537347|ref|XP_003537189.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 310
Score = 331 bits (848), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 157/205 (76%), Positives = 182/205 (88%), Gaps = 2/205 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGK+QLLARFA+++FS+DSKATIGVEFQTKTL+I +K VKAQIWDTAGQERYRA
Sbjct: 106 LIGDSAVGKTQLLARFAKNQFSVDSKATIGVEFQTKTLIIDNKTVKAQIWDTAGQERYRA 165
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYD+TKRQSFDN+A+WLEELRGHADKNI++ML+GNK DL TLRAVP
Sbjct: 166 VTSAYYRGAVGAMLVYDMTKRQSFDNMAKWLEELRGHADKNIVVMLIGNKCDLGTLRAVP 225
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA+EFA++E L FMETSALESTNVE AFLT+LTEIYR++SKK LTAND+++ G S L
Sbjct: 226 TEDAEEFAQRENLFFMETSALESTNVETAFLTILTEIYRLISKKTLTANDDADPSGISGL 285
Query: 181 LKATNIVVPGQEPESGRRSYN--CC 203
LK T I+VP QE +G + CC
Sbjct: 286 LKGTKIIVPSQEINAGEKKGKGGCC 310
>gi|116781881|gb|ABK22282.1| unknown [Picea sitchensis]
Length = 219
Score = 331 bits (848), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 158/206 (76%), Positives = 184/206 (89%), Gaps = 1/206 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQ+L+RFARDEFSLDSKATIGVEFQT+T+VI HK+VKAQIWDTAGQERYRA
Sbjct: 15 LIGDSAVGKSQILSRFARDEFSLDSKATIGVEFQTRTVVIEHKSVKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYDITKRQ+FD+V RWLEELR HAD NI+IMLVGNK DL+ LRAVP
Sbjct: 75 VTSAYYRGAVGAMLVYDITKRQTFDHVPRWLEELRNHADNNIVIMLVGNKCDLDNLRAVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFA+KEGL F+ETSA+E+TNVE AFLTVLTEI++IVSKK+L A+ + +G +S
Sbjct: 135 TEDAKEFAQKEGLFFLETSAMEATNVETAFLTVLTEIFKIVSKKSLIASQDQGNGNHAS- 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
L T+IVVPGQE ++ + +CCTS+
Sbjct: 194 LSGTSIVVPGQEQDTTTKKKSCCTSA 219
>gi|15230422|ref|NP_187823.1| RAB GTPase-like protein A4D [Arabidopsis thaliana]
gi|297834018|ref|XP_002884891.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|75334990|sp|Q9LH50.1|RAA4D_ARATH RecName: Full=Ras-related protein RABA4d; Short=AtRABA4d
gi|12322042|gb|AAG51065.1|AC069472_5 ras-related GTP-binding protein; 5118-4176 [Arabidopsis thaliana]
gi|9294115|dbj|BAB01966.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|67633628|gb|AAY78738.1| Ras-related GTP-binding family protein [Arabidopsis thaliana]
gi|297330731|gb|EFH61150.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332641639|gb|AEE75160.1| RAB GTPase-like protein A4D [Arabidopsis thaliana]
Length = 222
Score = 330 bits (847), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 161/206 (78%), Positives = 187/206 (90%), Gaps = 3/206 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGK+QLLARFAR+EFS+DSKATIGVEFQTKTLVI +K VKAQIWDTAGQERYRA
Sbjct: 20 LIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYD+TKRQSFD++A+WLEELRGHADKNI+IML+GNK DL +LRAVP
Sbjct: 80 VTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIMLIGNKCDLGSLRAVP 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA+EFA++E L FMETSALE+TNVE AFLT+LTEIYRI+SKK+LTA+D+ ++ G+SSL
Sbjct: 140 TEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRIISKKSLTADDD-DADGNSSL 198
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
LK T I++P E ESG+R CC S
Sbjct: 199 LKGTRIIIP-SEQESGKRG-GCCGKS 222
>gi|356500461|ref|XP_003519050.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 222
Score = 330 bits (846), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 153/203 (75%), Positives = 180/203 (88%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
L+GDSAVGK+QLLARFA+++F++DSKATIGVEFQTKTL+I K VKAQIWDTAGQERYRA
Sbjct: 20 LVGDSAVGKTQLLARFAKNQFNVDSKATIGVEFQTKTLIIDKKTVKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYD+T+R SFDN+A+WLEELRGHADKNI++ML+GNK DL TLRAVP
Sbjct: 80 VTSAYYRGAVGAMLVYDVTRRPSFDNMAKWLEELRGHADKNIVVMLIGNKCDLGTLRAVP 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA+EFA++E L FMETSALESTNVE AFLT+LTEIYR+VSKK LTAND+++ G S L
Sbjct: 140 TEDAEEFAQRENLFFMETSALESTNVETAFLTILTEIYRLVSKKTLTANDDADPSGISGL 199
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
LK T I+VP Q+ +G + CC
Sbjct: 200 LKGTKIIVPSQDINAGEKKGGCC 222
>gi|116789126|gb|ABK25126.1| unknown [Picea sitchensis]
Length = 224
Score = 330 bits (845), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 159/205 (77%), Positives = 181/205 (88%), Gaps = 1/205 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQLLARFAR+EFSLDSKATIGVEFQT+TLVI HK VKAQIWDTAGQERYRA
Sbjct: 20 LIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLVIDHKTVKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYDITKRQ+FD+VARWLEELRGHAD NI+IML+GNK DL LRAVP
Sbjct: 80 VTSAYYRGAVGAMLVYDITKRQTFDHVARWLEELRGHADNNIVIMLIGNKCDLGNLRAVP 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
EDA+EFA++EGL F+ETSALE+ NVE AFLTVLT+IYRI+SKKAL AND+ + G+S+L
Sbjct: 140 IEDAREFAQREGLFFLETSALEAINVESAFLTVLTDIYRIISKKALIANDD-QGNGNSAL 198
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
L T +VVPG+E + + CC+S
Sbjct: 199 LTGTKLVVPGEEQDVSTNNKYCCSS 223
>gi|225468180|ref|XP_002273530.1| PREDICTED: ras-related protein Rab11A [Vitis vinifera]
gi|147811153|emb|CAN70163.1| hypothetical protein VITISV_039255 [Vitis vinifera]
Length = 226
Score = 322 bits (824), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 157/206 (76%), Positives = 177/206 (85%), Gaps = 1/206 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQ+LARFAR+EFSLDSKATIGVEFQT+TLVI HK+VKAQIWDTAGQERYRA
Sbjct: 22 LIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRA 81
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYDITKRQSFD++ RWLEELRGHADKNI+I+L+GNK+DLE RAVP
Sbjct: 82 VTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRGHADKNIVIILIGNKTDLEEQRAVP 141
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFAEKEGL F+ETSALE+TNVE AFLTVLTEI+ IV+KK L A ++ +G +S
Sbjct: 142 TEDAKEFAEKEGLFFLETSALEATNVENAFLTVLTEIFNIVNKKNLVAGEDQANGNPAS- 200
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
L I +PG E +S CC SS
Sbjct: 201 LTGKRITIPGPAQEIPAKSNMCCKSS 226
>gi|12322015|gb|AAG51053.1|AC069473_15 ras-related GTP-binding protein, putative; 1694-2636 [Arabidopsis
thaliana]
Length = 220
Score = 320 bits (821), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 159/206 (77%), Positives = 185/206 (89%), Gaps = 5/206 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGK+QLLARFAR+EFS+DSKATIGVEFQTKTLVI +K VKAQIWDTAGQER A
Sbjct: 20 LIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKAQIWDTAGQER--A 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYD+TKRQSFD++A+WLEELRGHADKNI+IML+GNK DL +LRAVP
Sbjct: 78 VTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIMLIGNKCDLGSLRAVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA+EFA++E L FMETSALE+TNVE AFLT+LTEIYRI+SKK+LTA+D+ ++ G+SSL
Sbjct: 138 TEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRIISKKSLTADDD-DADGNSSL 196
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
LK T I++P E ESG+R CC S
Sbjct: 197 LKGTRIIIP-SEQESGKRG-GCCGKS 220
>gi|351726222|ref|NP_001237375.1| uncharacterized protein LOC100527786 [Glycine max]
gi|255633206|gb|ACU16959.1| unknown [Glycine max]
Length = 223
Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 156/203 (76%), Positives = 175/203 (86%), Gaps = 2/203 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQ+LARFAR+EFSLDSKATIGVEFQT+TLVI HK+VKAQIWDTAGQERYRA
Sbjct: 22 LIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRA 81
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYDITKRQSFD++ RWLEELR HADKNI+I+L+GNKSDLE R VP
Sbjct: 82 VTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRNHADKNIVIILIGNKSDLENQRQVP 141
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFAEKEGL F+ETSALE+TNVE AF+TVLTEI+ IV+KK L A D +G ++S
Sbjct: 142 TEDAKEFAEKEGLFFLETSALEATNVETAFMTVLTEIFNIVNKKNLAAGDNQGNGNAAS- 200
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
L I+VPG E +RS CC
Sbjct: 201 LSGKQIIVPGTAQEIPKRSM-CC 222
>gi|224139832|ref|XP_002323298.1| predicted protein [Populus trichocarpa]
gi|222867928|gb|EEF05059.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 155/203 (76%), Positives = 176/203 (86%), Gaps = 4/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQLLARFAR+EF++DSKATIGVEFQTKTL +H+K VKAQIWDTAGQERYRA
Sbjct: 19 LIGDSAVGKSQLLARFARNEFTVDSKATIGVEFQTKTLAMHNKTVKAQIWDTAGQERYRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYD+TKRQSFD++ARWLEELRGHADK+IIIML+GNK DL +LRAVP
Sbjct: 79 VTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKSIIIMLIGNKCDLGSLRAVP 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
EDAKEFA++E L FMETSALE+TNVE AFLT+LTEIYRI+SK+ L NDES +S
Sbjct: 139 AEDAKEFAQRENLFFMETSALEATNVETAFLTMLTEIYRIISKRTLAGNDESNE--NSGA 196
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
K T I+VP QE S ++ CC
Sbjct: 197 FKGTRILVPSQEQNSEKKG--CC 217
>gi|449451415|ref|XP_004143457.1| PREDICTED: ras-related protein Rab11A-like [Cucumis sativus]
gi|449496418|ref|XP_004160129.1| PREDICTED: ras-related protein Rab11A-like [Cucumis sativus]
Length = 226
Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 152/205 (74%), Positives = 177/205 (86%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQ+LARFAR+EFSLDSKATIGVEFQT+TLVI HK+VKAQIWDTAGQERYRA
Sbjct: 22 LIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRA 81
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA+GAMLVYDITKRQ+FD++ RWLEELR HADKNI+I+L+GNKSDLE RAVP
Sbjct: 82 VTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHADKNIVIILIGNKSDLEDQRAVP 141
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFAEKEGL F+ETSALESTNVE AF+TVLTEI+ I+++K L A + +G S+SL
Sbjct: 142 TEDAKEFAEKEGLFFLETSALESTNVENAFMTVLTEIFSIMNRKNLAAGENQGNGNSASL 201
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
I++PG E +S CC++
Sbjct: 202 AGGKKIIIPGPAQEIPAKSKMCCST 226
>gi|356512683|ref|XP_003525046.1| PREDICTED: ras-related protein Rab11A [Glycine max]
Length = 229
Score = 319 bits (817), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 156/206 (75%), Positives = 175/206 (84%), Gaps = 1/206 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQ+LARFAR+EFSLDSK+TIGVEFQT+TLVI HK VKAQIWDTAGQERYRA
Sbjct: 25 LIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTAGQERYRA 84
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYDITKRQ+FD++ RWLEELR HADKNI+I+L GNK DLE R VP
Sbjct: 85 VTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILTGNKCDLENQRDVP 144
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFAEKEGL F+ETSALE+TNVE AF+TVLTEIY IV+KK LTA DE++ G+S+
Sbjct: 145 TEDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKNLTA-DENQGNGNSAS 203
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
L I+VPG E + CC SS
Sbjct: 204 LSGQKIIVPGPAQEIPAKRNMCCQSS 229
>gi|1381676|gb|AAB97114.1| small GTP-binding protein, partial [Glycine max]
Length = 222
Score = 318 bits (815), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 156/206 (75%), Positives = 175/206 (84%), Gaps = 1/206 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQ+LARFAR+EFSLDSK+TIGVEFQT+TLVI HK VKAQIWDTAGQERYRA
Sbjct: 18 LIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYDITKRQ+FD++ RWLEELR HADKNI+I+L GNK DLE R VP
Sbjct: 78 VTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILTGNKCDLENQRDVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFAEKEGL F+ETSALE+TNVE AF+TVLTEIY IV+KK LTA DE++ G+S+
Sbjct: 138 TEDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKNLTA-DENQGNGNSAS 196
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
L I+VPG E + CC SS
Sbjct: 197 LSGQKIIVPGPAQEIPAKRNMCCQSS 222
>gi|356495927|ref|XP_003516822.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 223
Score = 317 bits (813), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 153/206 (74%), Positives = 179/206 (86%), Gaps = 2/206 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGK+QLLARFAR+EFSLDSKATIGVEFQTKTL+I +K +KAQIWDTAGQERYRA
Sbjct: 20 LIGDSAVGKTQLLARFARNEFSLDSKATIGVEFQTKTLIIDNKTIKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYD+TKRQSFD++ RWLEELRGHAD+NI+IML+GNK DL +LRAVP
Sbjct: 80 VTSAYYRGAVGAMLVYDMTKRQSFDHMVRWLEELRGHADQNIVIMLIGNKCDLGSLRAVP 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
EDA+E A++E L FMETSALESTNVE FLT+LTEIYRI +KK+LTA+D+ G S L
Sbjct: 140 MEDAEEVAQRENLFFMETSALESTNVETCFLTILTEIYRIHAKKSLTASDDDNWG--SGL 197
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
LK + I+VP QE ++G + CC +S
Sbjct: 198 LKGSRIIVPNQEIDNGGKKGGCCFAS 223
>gi|356567670|ref|XP_003552040.1| PREDICTED: ras-related protein Rab11A-like [Glycine max]
Length = 223
Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 154/203 (75%), Positives = 175/203 (86%), Gaps = 2/203 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQ+LARFAR+EFSLDSKATIGVEFQT+TLVI HK++KAQIWDTAGQERYRA
Sbjct: 22 LIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSIKAQIWDTAGQERYRA 81
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYDITKRQSFD++ RWLEELR HADKNI+I+L+GNKSDLE R VP
Sbjct: 82 VTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRNHADKNIVIILIGNKSDLENQRQVP 141
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFAEKEGL F+ETSALE+TNVE AF+TVLTEI+ I++KK L A+D + S+S
Sbjct: 142 TEDAKEFAEKEGLFFLETSALEATNVETAFMTVLTEIFNIINKKNLAASDNQGNDNSAS- 200
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
L I+VPG E +RS CC
Sbjct: 201 LSGKKIIVPGPAQEIPKRSM-CC 222
>gi|303738|dbj|BAA02110.1| GTP-binding protein [Pisum sativum]
gi|738935|prf||2001457C GTP-binding protein
Length = 225
Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 154/205 (75%), Positives = 176/205 (85%), Gaps = 1/205 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQ+LARF+R+EFSLDSK+TIGVEFQT+TLVI HK VKAQIWDTAGQERYRA
Sbjct: 22 LIGDSAVGKSQILARFSRNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTAGQERYRA 81
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYDITKRQ+FD++ RWLEELR HADKNI+I+LVGNKSDLE R VP
Sbjct: 82 VTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILVGNKSDLENQRDVP 141
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFAEKEGL F+ETSAL++TNVE +F+TVLTEIY I++KK L A DES+ G+S+
Sbjct: 142 TEDAKEFAEKEGLFFLETSALQATNVEASFMTVLTEIYNILNKKNLAA-DESQGNGNSAS 200
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
L IV+PG E +S CC S
Sbjct: 201 LLGQKIVIPGPGQEVPAKSSMCCQS 225
>gi|357463299|ref|XP_003601931.1| GTP-binding protein [Medicago truncatula]
gi|355490979|gb|AES72182.1| GTP-binding protein [Medicago truncatula]
gi|388518511|gb|AFK47317.1| unknown [Medicago truncatula]
Length = 222
Score = 316 bits (810), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 153/203 (75%), Positives = 177/203 (87%), Gaps = 2/203 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQ+LARFAR++FS+DSKATIGVEFQT+TLVI HK+VKAQIWDTAGQERYRA
Sbjct: 21 LIGDSAVGKSQILARFARNDFSMDSKATIGVEFQTRTLVIEHKSVKAQIWDTAGQERYRA 80
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYDITKR SFD++ RWLEELR HADKNI+I+L+GNKSDLE RAVP
Sbjct: 81 VTSAYYRGAVGAMLVYDITKRPSFDHIPRWLEELRNHADKNIVIILIGNKSDLEEQRAVP 140
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFAEKEGL F+ETSAL++TNVE AF+TVLTEI+ IV+KK L A DE++ G+S+
Sbjct: 141 TEDAKEFAEKEGLFFLETSALQATNVETAFMTVLTEIFNIVNKKNLAA-DENQGNGNSAS 199
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
L I+VPG E ++S CC
Sbjct: 200 LSGKKIIVPGPAQEIPKKSM-CC 221
>gi|255632197|gb|ACU16457.1| unknown [Glycine max]
Length = 229
Score = 316 bits (810), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 155/206 (75%), Positives = 174/206 (84%), Gaps = 1/206 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQ+LARFAR+EFSLDSK+TIGVEFQT+TLVI HK VKAQIWDTAGQERYRA
Sbjct: 25 LIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTAGQERYRA 84
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYDITKRQ+FD++ RWLEELR HADKNI+I+L GNK DLE R VP
Sbjct: 85 VTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILTGNKCDLENQRDVP 144
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T DAKEFAEKEGL F+ETSALE+TNVE AF+TVLTEIY IV+KK LTA DE++ G+S+
Sbjct: 145 TGDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKNLTA-DENQGNGNSAS 203
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
L I+VPG E + CC SS
Sbjct: 204 LSGQKIIVPGPAQEIPAKRNMCCQSS 229
>gi|388522627|gb|AFK49375.1| unknown [Medicago truncatula]
Length = 225
Score = 316 bits (809), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 153/205 (74%), Positives = 175/205 (85%), Gaps = 1/205 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQ+LARF+R+EFSLDSK+TIGVEFQT+TLVI HK VKAQIWDTAGQERYRA
Sbjct: 22 LIGDSAVGKSQILARFSRNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTAGQERYRA 81
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYDITKRQ+FD++ RWLEELR HADKNI+I+LVGNKSDLE R VP
Sbjct: 82 VTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILVGNKSDLENQRDVP 141
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFAEKEGL F+ETSAL++TNVE +F+TVLTEIY V+KK L A DES+ G+S+
Sbjct: 142 TEDAKEFAEKEGLFFLETSALQATNVEASFMTVLTEIYNTVNKKNLAA-DESQGNGNSAS 200
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
L I++PG E +S CC S
Sbjct: 201 LLGQKIIIPGPAQEIPAKSNMCCQS 225
>gi|226088538|dbj|BAH37015.1| NtRab11D [Nicotiana tabacum]
Length = 222
Score = 315 bits (808), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 154/206 (74%), Positives = 181/206 (87%), Gaps = 4/206 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQ+LARFAR+EFSLDSKATIGVEFQT+TLVI HK+VKAQIWDTAGQERYRA
Sbjct: 20 LIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYDITKRQ+FD++ RWLEELR HAD+NI+IML+GNK+DLE RAVP
Sbjct: 80 VTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIGNKTDLEDQRAVP 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFA+KEGL F+ETSA+E+TNVE AFLTVLTEI+ IV+KK L A DE++S G+ +
Sbjct: 140 TEDAKEFAQKEGLFFLETSAMEATNVEDAFLTVLTEIFNIVNKKNLAA-DENQSNGNPAS 198
Query: 181 LKATNIVVPGQ-EPESGRRSYNCCTS 205
L I+VPG + G+++ CC+S
Sbjct: 199 LTGKKILVPGPGQVIPGKKA--CCSS 222
>gi|217071438|gb|ACJ84079.1| unknown [Medicago truncatula]
Length = 225
Score = 315 bits (806), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 153/205 (74%), Positives = 175/205 (85%), Gaps = 1/205 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQ+LARF+ +EFSLDSK+TIGVEFQT+TLVI HK VKAQIWDTAGQERYRA
Sbjct: 22 LIGDSAVGKSQILARFSGNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTAGQERYRA 81
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYDITKRQ+FD++ RWLEELR HADKNI+I+LVGNKSDLE R VP
Sbjct: 82 VTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILVGNKSDLENQRDVP 141
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFAEKEGL F+ETSAL++TNVE +F+TVLTEIY IV+KK L A DES+ G+S+
Sbjct: 142 TEDAKEFAEKEGLFFLETSALQATNVEASFMTVLTEIYNIVNKKNLAA-DESQGNGNSAS 200
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
L I++PG E +S CC S
Sbjct: 201 LLGQKIIIPGPAQEIPAKSNMCCQS 225
>gi|3024500|sp|Q40191.1|RB11A_LOTJA RecName: Full=Ras-related protein Rab11A; Flags: Precursor
gi|1370142|emb|CAA98177.1| RAB11A [Lotus japonicus]
Length = 226
Score = 314 bits (804), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 153/206 (74%), Positives = 174/206 (84%), Gaps = 1/206 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQ+LARFAR+EFSLDSK+TIGVEFQT+TLVI HK VKAQIWDTAGQERYRA
Sbjct: 22 LIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTAGQERYRA 81
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYDITKRQ+FD++ RWLEELR HADKNI+I+L+GNK DL R VP
Sbjct: 82 VTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNKCDLVNQRDVP 141
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFAEKEGL F+ETSALE+TNVE AF TVLTEIY IV+KK+L A DES+ G+S+
Sbjct: 142 TEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKSLAA-DESQGNGNSAS 200
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
L I++PG E + CC +S
Sbjct: 201 LSGQKIIIPGPAQEIPAKRNMCCQAS 226
>gi|356541333|ref|XP_003539132.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 223
Score = 312 bits (800), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 151/206 (73%), Positives = 177/206 (85%), Gaps = 2/206 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGK+QLLARFAR+EFSLDSKATIGVEFQTKTL+I +K +KAQIWDTAGQERYRA
Sbjct: 20 LIGDSAVGKTQLLARFARNEFSLDSKATIGVEFQTKTLIIDNKIIKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYD+TKRQSFD++ +WLEELRGHAD+NI+IML+GNK DL +LRAVP
Sbjct: 80 VTSAYYRGAVGAMLVYDMTKRQSFDHMVKWLEELRGHADQNIVIMLIGNKCDLGSLRAVP 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
EDA+E A++E L FMETSALESTNVE FLT+LTEIYRI +KK+LT +D+ G S L
Sbjct: 140 MEDAEELAQRENLFFMETSALESTNVETCFLTILTEIYRIHAKKSLTTSDDDI--GGSGL 197
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
LK + I+VP QE +G + CC +S
Sbjct: 198 LKGSRIIVPNQEIYNGGKKGGCCFAS 223
>gi|255581740|ref|XP_002531672.1| protein with unknown function [Ricinus communis]
gi|223528703|gb|EEF30716.1| protein with unknown function [Ricinus communis]
Length = 225
Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 155/208 (74%), Positives = 174/208 (83%), Gaps = 8/208 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQ+LARFAR+EFSLDSKATIGVEFQT+TLVI HK+VKAQIWDTAGQERYRA
Sbjct: 22 LIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRA 81
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA+LVYDITKRQ+FD++ RWLEELR HADKNI+I+LVGNK DLE+ R VP
Sbjct: 82 VTSAYYRGAVGAILVYDITKRQTFDHIPRWLEELRSHADKNIVIILVGNKCDLESQRVVP 141
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFA+KEGL F+ETSALESTNVE AFLTVLTEI+ IV+KK L D +G +S
Sbjct: 142 TEDAKEFAQKEGLFFLETSALESTNVETAFLTVLTEIFNIVNKKTLAGADNQTNGNPAS- 200
Query: 181 LKATNIVVPGQE---PESGRRSYNCCTS 205
L IVVPG PE + CC+S
Sbjct: 201 LGGKKIVVPGPAQVIPEKSK----CCSS 224
>gi|224120212|ref|XP_002330992.1| predicted protein [Populus trichocarpa]
gi|222872922|gb|EEF10053.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 152/203 (74%), Positives = 174/203 (85%), Gaps = 4/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQ LARFAR+EF+ DSKATIGVEFQTKTL + +K VKAQIWDTAGQERYRA
Sbjct: 19 LIGDSAVGKSQFLARFARNEFNADSKATIGVEFQTKTLAMDNKTVKAQIWDTAGQERYRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYD+TKRQSFD++ARWLEELRGHADK+IIIML+GNK DL +LRAVP
Sbjct: 79 VTSAYYRGAVGAMLVYDMTKRQSFDHLARWLEELRGHADKSIIIMLIGNKCDLGSLRAVP 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA+EFA++E L FMETSALE+TNVE AF TVLTEIYRI+SKK L ND+S+ G+ +
Sbjct: 139 TEDAEEFAQRENLFFMETSALEATNVETAFWTVLTEIYRIISKKTLAGNDKSD--GNPGV 196
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
K T I+VP Q S ++ CC
Sbjct: 197 FKGTRILVPSQAQNSEKKG--CC 217
>gi|224096151|ref|XP_002310552.1| predicted protein [Populus trichocarpa]
gi|222853455|gb|EEE91002.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 151/204 (74%), Positives = 176/204 (86%), Gaps = 2/204 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQ+LARFAR+EFSLDSKATIGVEFQT+TLVI HK+VKAQIWDTAGQERYRA
Sbjct: 22 LIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTAGQERYRA 81
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYDITKRQ+FD++ RWLEELR HADKNI+I+L+GNKSDLE RAVP
Sbjct: 82 VTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNKSDLEDQRAVP 141
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFA+KEGL F+ETSAL++TNVE AF+TVLTEI+ IV+KK L A ++ +G +S
Sbjct: 142 TEDAKEFAQKEGLFFLETSALQATNVENAFMTVLTEIFNIVNKKNLVAGEDQINGNPAS- 200
Query: 181 LKATNIVVPGQEPESGRRSYNCCT 204
L I++PG E +S CC+
Sbjct: 201 LSGKKIIIPGPAQEIPAKS-KCCS 223
>gi|255636322|gb|ACU18500.1| unknown [Glycine max]
Length = 209
Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 144/176 (81%), Positives = 166/176 (94%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGK+QLLARFA+++FS+DSKATIGVEFQTKTL+I +K VKAQIWDTAGQERYRA
Sbjct: 21 LIGDSAVGKTQLLARFAKNQFSVDSKATIGVEFQTKTLIIDNKTVKAQIWDTAGQERYRA 80
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYD+TKRQSFDN+A+WLEELRGHADKNI++ML+GNK DL TLRAVP
Sbjct: 81 VTSAYYRGAVGAMLVYDMTKRQSFDNMAKWLEELRGHADKNIVVMLIGNKCDLGTLRAVP 140
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGG 176
TEDA+EFA++E L FMETSALESTNVE AFLT+LTEIYR++SKK LTAND+++ G
Sbjct: 141 TEDAEEFAQRENLFFMETSALESTNVETAFLTILTEIYRLISKKTLTANDDADPSG 196
>gi|3024505|sp|Q40522.1|RB11D_TOBAC RecName: Full=Ras-related protein Rab11D
gi|623580|gb|AAA74114.1| putative [Nicotiana tabacum]
Length = 222
Score = 309 bits (792), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 152/208 (73%), Positives = 177/208 (85%), Gaps = 8/208 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQ+LARFAR+EFSLDSKATIGVEFQT+TL I HK+VKAQIWDTAGQERYRA
Sbjct: 20 LIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQHKSVKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYDITKRQ+FD++ RWLEELR HAD+NI+IML+GNK+DLE RAVP
Sbjct: 80 VTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIGNKTDLEDQRAVP 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFA+KEGL F+ETSA+E+TN+E AFLTVLTEI+ IV+KK L A D+++S G+ +
Sbjct: 140 TEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEIFNIVNKKNLAA-DDNQSNGNPAS 198
Query: 181 LKATNIVVPGQE---PESGRRSYNCCTS 205
L I+VPG PE CC+S
Sbjct: 199 LTGKKILVPGPGQVIPEKKA----CCSS 222
>gi|15238392|ref|NP_201330.1| RAB GTPase homolog A4A [Arabidopsis thaliana]
gi|75333961|sp|Q9FJN8.1|RAA4A_ARATH RecName: Full=Ras-related protein RABA4a; Short=AtRABA4a
gi|10178189|dbj|BAB11663.1| GTP-binding protein [Arabidopsis thaliana]
gi|15028289|gb|AAK76621.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|19310619|gb|AAL85040.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|21592616|gb|AAM64565.1| GTP-binding protein [Arabidopsis thaliana]
gi|332010648|gb|AED98031.1| RAB GTPase homolog A4A [Arabidopsis thaliana]
Length = 226
Score = 308 bits (789), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 149/205 (72%), Positives = 172/205 (83%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQ+LAR+ARDEFSLDSKATIGVEFQT+TLVI HK+VKAQIWDTAGQERYRA
Sbjct: 22 LIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTAGQERYRA 81
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYDIT+RQ+FD++ RWLEELR HADKNI+I+L+GNKSDL RA+P
Sbjct: 82 VTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIILIGNKSDLVDQRAIP 141
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFAEKEGL F+ETSA +TNVE AF TVLTEI+ IV+KK+L A+++ E+G SL
Sbjct: 142 TEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKKSLAASEDQENGNPGSL 201
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+VPG +S CC S
Sbjct: 202 AGKKIDIVPGPGQVIPNKSNMCCNS 226
>gi|224083598|ref|XP_002307071.1| predicted protein [Populus trichocarpa]
gi|118482292|gb|ABK93073.1| unknown [Populus trichocarpa]
gi|222856520|gb|EEE94067.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 149/203 (73%), Positives = 174/203 (85%), Gaps = 2/203 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQ+LARFAR+EFSLDSKATIGVEFQT+TLVI HK+VKAQIWDTAGQERYRA
Sbjct: 22 LIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTAGQERYRA 81
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYDITKRQ+FD++ RWLEELR HADKNI+I+L+GNKSDLE RAVP
Sbjct: 82 VTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRSHADKNIVIILIGNKSDLEDQRAVP 141
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED EFA+KEGL F+ETSAL++TNVE AF+T+LTEI+ IV+KK L A E++S G+ +
Sbjct: 142 TEDVNEFAQKEGLFFLETSALQATNVESAFMTLLTEIFNIVNKKNLIAG-ENQSNGNPAS 200
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
L I++PG E +S CC
Sbjct: 201 LSGKKIIIPGPAQEIPSKS-KCC 222
>gi|3024503|sp|Q40520.1|RB11C_TOBAC RecName: Full=Ras-related protein Rab11C
gi|623576|gb|AAA74112.1| putative [Nicotiana tabacum]
Length = 222
Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 150/206 (72%), Positives = 178/206 (86%), Gaps = 4/206 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGK+Q+LARFAR+EFSLDSKATIGVEFQT+TLVI HK+VKAQIWDTAGQERYRA
Sbjct: 20 LIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYDITKRQ+FD++ RWLEELR HAD+NI+IML GNK+DLE RAVP
Sbjct: 80 VTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLTGNKTDLEDQRAVP 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFA+KEGL F+ETSA+E+T +E AFLTVLTEI+ IV+KK L A DE++S + +
Sbjct: 140 TEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLTEIFNIVNKKNLAA-DENQSNSNPAS 198
Query: 181 LKATNIVVPGQ-EPESGRRSYNCCTS 205
L I+VPG + G+++ CC+S
Sbjct: 199 LTGKKILVPGPGQVIPGKKA--CCSS 222
>gi|356528455|ref|XP_003532818.1| PREDICTED: ras-related protein Rab11A-like [Glycine max]
Length = 209
Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 148/187 (79%), Positives = 168/187 (89%), Gaps = 1/187 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQ+LARFAR+EFSLDSK+TIGVEFQT+TLVI HK VKAQIWDTAGQERYRA
Sbjct: 23 LIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTAGQERYRA 82
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYDITKRQ+FD++ RWLEELR HADKNI+I+L+GNK DLE+ R VP
Sbjct: 83 VTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNKCDLESQRDVP 142
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFAEKEGL F+ETSALE+TNVE AF+TVLTEIY IV+KK LTA DE++ G+S+
Sbjct: 143 TEDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKNLTA-DENQGNGNSAS 201
Query: 181 LKATNIV 187
L I+
Sbjct: 202 LSGQKII 208
>gi|388504040|gb|AFK40086.1| unknown [Lotus japonicus]
Length = 199
Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 143/180 (79%), Positives = 165/180 (91%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGK+QLLARF+R++F++DSKATIGVEFQTKTLVI K VKAQIWDTAGQERYRA
Sbjct: 20 LIGDSAVGKTQLLARFSRNQFNVDSKATIGVEFQTKTLVIDSKTVKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYD+TKRQSFD++A+WLEELRGHAD NI+IML+GNK DL TL+AVP
Sbjct: 80 VTSAYYRGAVGAMLVYDLTKRQSFDHMAKWLEELRGHADTNIVIMLIGNKCDLATLKAVP 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA+EFA++E L FMETSALESTNVE AFLT+LTEIYR++ KK LTAND+++ GSS
Sbjct: 140 TEDAQEFAQRENLFFMETSALESTNVETAFLTILTEIYRLIGKKTLTANDDTDPSGSSGF 199
>gi|297794129|ref|XP_002864949.1| hypothetical protein ARALYDRAFT_919858 [Arabidopsis lyrata subsp.
lyrata]
gi|297310784|gb|EFH41208.1| hypothetical protein ARALYDRAFT_919858 [Arabidopsis lyrata subsp.
lyrata]
Length = 226
Score = 305 bits (782), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 147/205 (71%), Positives = 172/205 (83%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQ+LAR+ARDEFSLDSKATIGVEFQT+TLVI HK+VKAQIWDTAGQERYRA
Sbjct: 22 LIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTAGQERYRA 81
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYDIT+RQ+FD++ RWLEELR HADKNI+I+L+GNKSDL RA+P
Sbjct: 82 VTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIILIGNKSDLVDQRAIP 141
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA+EFAEKEGL F+ETSA +TNVE AF TVL+EI+ IV+KK+L A+++ E+G SL
Sbjct: 142 TEDAREFAEKEGLFFLETSAFNATNVESAFSTVLSEIFNIVNKKSLAASEDQENGNPGSL 201
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+VPG +S CC S
Sbjct: 202 AGKKIDIVPGPGQVIPNKSNMCCNS 226
>gi|226532614|ref|NP_001149604.1| LOC100283230 [Zea mays]
gi|195628412|gb|ACG36036.1| ras-related protein Rab11D [Zea mays]
gi|224032313|gb|ACN35232.1| unknown [Zea mays]
gi|413934318|gb|AFW68869.1| Ras protein Rab11D [Zea mays]
Length = 217
Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 150/205 (73%), Positives = 173/205 (84%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQ+LARFAR+EFSLDSKATIGVEFQT+TLVI HK+VKAQIWDTAGQERYRA
Sbjct: 16 LIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIEHKSVKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA+GA+LVYDITKRQSFD++ RWLEELRGHADKNI+IMLVGNKSDLE RAV
Sbjct: 76 VTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNKSDLEDERAVS 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFAEKE L F+ETSAL++TNVE AF TVLTEI++I SKK + A+ + G++
Sbjct: 136 TEDAKEFAEKENLFFLETSALQATNVENAFQTVLTEIFKIHSKKNMAAD--PRANGAAPS 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
L ++VPG E + CC+S
Sbjct: 194 LAGKKVIVPGPAQEIPKS--KCCSS 216
>gi|253761760|ref|XP_002489255.1| hypothetical protein SORBIDRAFT_0012s021070 [Sorghum bicolor]
gi|241947115|gb|EES20260.1| hypothetical protein SORBIDRAFT_0012s021070 [Sorghum bicolor]
Length = 217
Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 149/205 (72%), Positives = 174/205 (84%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQ+LARFAR+EFSLDSKATIGVEFQT+TLVI HK+VKAQIWDTAGQERYRA
Sbjct: 16 LIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA+GA+LVYDITKRQSFD++ RWLEELRGHADKNI+IMLVGNKSDLE RAV
Sbjct: 76 VTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNKSDLEEERAVS 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
+EDAKEFAEKE L F+ETSAL++TNVE AF TVLTEI++I SKK + A+ ++ G++
Sbjct: 136 SEDAKEFAEKENLFFLETSALQATNVENAFQTVLTEIFKIHSKKNMAAD--PKANGAAPS 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
L ++VPG E + CC+S
Sbjct: 194 LAGKKVIVPGPAQEIPKS--KCCSS 216
>gi|226529763|ref|NP_001151068.1| ras-related protein Rab11D [Zea mays]
gi|226958362|ref|NP_001152898.1| uncharacterized protein LOC100272235 [Zea mays]
gi|194696242|gb|ACF82205.1| unknown [Zea mays]
gi|195644068|gb|ACG41502.1| ras-related protein Rab11D [Zea mays]
gi|413956768|gb|AFW89417.1| Ras protein Rab11D [Zea mays]
Length = 217
Score = 301 bits (772), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 147/205 (71%), Positives = 174/205 (84%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQ+LARFAR+EFSLDSKATIGVEFQT+TLVI H++VKAQIWDTAGQERYRA
Sbjct: 16 LIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHRSVKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA+GA+LVYDIT+RQSFD++ RWL+ELR HADKNI+IMLVGNKSDLE RAV
Sbjct: 76 VTSAYYRGALGALLVYDITRRQSFDHIPRWLDELRAHADKNIVIMLVGNKSDLEEQRAVS 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFAEKE L F+ETSAL++TNVE AF TVLTEI++I SKK + + E +S G++
Sbjct: 136 TEDAKEFAEKENLFFLETSALQATNVESAFQTVLTEIFKIHSKKNMVS--EPKSNGAAPA 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ T ++VPG E + CC+S
Sbjct: 194 MPGTKVLVPGPAQEIPKS--KCCSS 216
>gi|168046618|ref|XP_001775770.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672922|gb|EDQ59453.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 301 bits (771), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 146/205 (71%), Positives = 172/205 (83%), Gaps = 3/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQLLARF+R+EFSL+SKATIGVEFQT+T+V+ HK +KAQIWDTAGQERYRA
Sbjct: 20 LIGDSAVGKSQLLARFSRNEFSLESKATIGVEFQTRTVVVDHKTIKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYDITK+QSFD+V RWLEELR HAD NI+IML+GNKSDL LR V
Sbjct: 80 VTSAYYRGAVGAMLVYDITKQQSFDHVQRWLEELRAHADANIVIMLIGNKSDLSNLRQVE 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T+ A+EFAEKE L F+ETSA+ESTNVE AF TVL+EIY++VSKKAL A+ E+ G+S L
Sbjct: 140 TDTAREFAEKESLSFLETSAMESTNVETAFFTVLSEIYKVVSKKALLAD---ENQGNSPL 196
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
L T I + ++ G + CC+S
Sbjct: 197 LPGTKIKLADKDDVIGAKKAGCCSS 221
>gi|357146059|ref|XP_003573862.1| PREDICTED: ras-related protein Rab11D-like [Brachypodium
distachyon]
Length = 216
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 149/205 (72%), Positives = 174/205 (84%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQ+LARFAR+EFSLDSKATIGVEFQT+TL+I HK+VKAQIWDTAGQERYRA
Sbjct: 15 LIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLLIDHKSVKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA+GA+LVYDITKRQSFD++ RWLEELRGHADKNI+IMLVGNKSDLE RAV
Sbjct: 75 VTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNKSDLEDERAVS 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFAEKE + F+ETSAL++TNVE AF TVL+EI++I SKK + A E ++ GS+
Sbjct: 135 TEDAKEFAEKENVFFLETSALQATNVENAFQTVLSEIFKIHSKKNIAA--EPKANGSAPS 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
L ++VPG E + CC+S
Sbjct: 193 LAGKKVLVPGPAQEIPKS--KCCSS 215
>gi|297741822|emb|CBI33135.3| unnamed protein product [Vitis vinifera]
Length = 195
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 144/167 (86%), Positives = 159/167 (95%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQ+LARFAR+EFSLDSKATIGVEFQT+TLVI HK+VKAQIWDTAGQERYRA
Sbjct: 22 LIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRA 81
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYDITKRQSFD++ RWLEELRGHADKNI+I+L+GNK+DLE RAVP
Sbjct: 82 VTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRGHADKNIVIILIGNKTDLEEQRAVP 141
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALT 167
TEDAKEFAEKEGL F+ETSALE+TNVE AFLTVLTEI+ IV+KK L+
Sbjct: 142 TEDAKEFAEKEGLFFLETSALEATNVENAFLTVLTEIFNIVNKKNLS 188
>gi|116784406|gb|ABK23331.1| unknown [Picea sitchensis]
Length = 222
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 141/203 (69%), Positives = 171/203 (84%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGKSQ+L+RFA++EFSLDSK+TIGVEFQT+T+ I +K +K QIWDTAGQERYRA
Sbjct: 20 VIGDSAVGKSQILSRFAKNEFSLDSKSTIGVEFQTRTIAIDNKTIKTQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA+GAMLVYDITKRQSFD+VARWLEELRGHAD NI+IML+GNK DL +RAVP
Sbjct: 80 VTSAYYRGALGAMLVYDITKRQSFDHVARWLEELRGHADNNIVIMLIGNKCDLRDMRAVP 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
EDAKEFA++EGL F ETSALE+ NVE AF+T LTEIYRIVS+KALTAN+E +G +++L
Sbjct: 140 EEDAKEFAQREGLFFFETSALEAINVETAFITALTEIYRIVSRKALTANEEERNGNAAAL 199
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ ++P + +CC
Sbjct: 200 TGTKIALSSPEQPVMTVKKRSCC 222
>gi|115481766|ref|NP_001064476.1| Os10g0377400 [Oryza sativa Japonica Group]
gi|78708412|gb|ABB47387.1| Ras-related protein Rab11D, putative, expressed [Oryza sativa
Japonica Group]
gi|113639085|dbj|BAF26390.1| Os10g0377400 [Oryza sativa Japonica Group]
gi|215767227|dbj|BAG99455.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218184417|gb|EEC66844.1| hypothetical protein OsI_33317 [Oryza sativa Indica Group]
gi|222612729|gb|EEE50861.1| hypothetical protein OsJ_31310 [Oryza sativa Japonica Group]
Length = 216
Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/205 (72%), Positives = 174/205 (84%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQ+LARFAR+EFS+DSKATIGVEFQT+TL+I HK+VKAQIWDTAGQERYRA
Sbjct: 15 LIGDSAVGKSQILARFARNEFSIDSKATIGVEFQTRTLLIDHKSVKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA+GA+LVYDITKRQSFD++ RWLEELRGHADKNI+IMLVGNKSDLE RAV
Sbjct: 75 VTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNKSDLEDERAVS 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFAEKE L F+ETSAL++TNVE AF TVL+EI++I SKK + A+ ++ G++
Sbjct: 135 TEDAKEFAEKENLFFLETSALQATNVENAFQTVLSEIFKIHSKKNMAAD--PKANGAAPS 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
L +VVPG E + CC+S
Sbjct: 193 LAGKKVVVPGPAQEIPKS--KCCSS 215
>gi|226503741|ref|NP_001151560.1| ras-related protein Rab11D [Zea mays]
gi|194708702|gb|ACF88435.1| unknown [Zea mays]
gi|195647718|gb|ACG43327.1| ras-related protein Rab11D [Zea mays]
gi|414865255|tpg|DAA43812.1| TPA: Ras protein Rab11D [Zea mays]
Length = 217
Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 146/205 (71%), Positives = 174/205 (84%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQ+LARFAR+EFSLDSKATIGVEFQT+TLVI H++VKAQIWDTAGQERYRA
Sbjct: 16 LIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHRSVKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA+GA+LVYDIT+RQSFD++ RWL+ELR HADKNI+IMLVGNKSDLE RAV
Sbjct: 76 VTSAYYRGALGALLVYDITRRQSFDHIPRWLDELRAHADKNIVIMLVGNKSDLEEQRAVS 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFAEKE L F+ETSAL++TNVE +F TVLTEI++I SKK + + E +S G++
Sbjct: 136 TEDAKEFAEKENLFFLETSALQATNVESSFQTVLTEIFKIHSKKNMVS--EPKSNGAAPA 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ T ++VPG E + CC+S
Sbjct: 194 MPGTKVLVPGPAQEIPKS--KCCSS 216
>gi|15236099|ref|NP_195709.1| RAB GTPase homolog A4B [Arabidopsis thaliana]
gi|75337421|sp|Q9SMQ6.1|RAA4B_ARATH RecName: Full=Ras-related protein RABA4b; Short=AtRABA4b; AltName:
Full=Ras-related protein GB3; Short=AtGB3; AltName:
Full=Ras-related protein Rab11G; Short=AtRab11G
gi|4490750|emb|CAB38912.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|7271054|emb|CAB80662.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|18253027|gb|AAL62440.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|22136472|gb|AAM91314.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|332661750|gb|AEE87150.1| RAB GTPase homolog A4B [Arabidopsis thaliana]
Length = 224
Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 145/206 (70%), Positives = 172/206 (83%), Gaps = 3/206 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQLLARFARDEFS+DSKATIGVEFQT+TL I K++KAQIWDTAGQERYRA
Sbjct: 22 LIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTAGQERYRA 81
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYD+TKR++F+++ RWLEELR HADKNI+I+L+GNKSDLE RAVP
Sbjct: 82 VTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSDLEDQRAVP 141
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFAEKEGL F+ETSAL +TNVE +F T++T+IY V+KK L + +S + GS
Sbjct: 142 TEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASEGDSNNPGS--- 198
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
L I++PG E ++ CCTSS
Sbjct: 199 LAGKKILIPGSGQEIPAKTSTCCTSS 224
>gi|326528455|dbj|BAJ93377.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 149/205 (72%), Positives = 172/205 (83%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQ+LARFAR+EFSLDSKATIGVEFQT+TLVI HK+VKAQIWDTAGQERYRA
Sbjct: 15 LIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA+GA+LVYDITKRQSFD++ RWLEELRGHADKNIIIMLVGNKSDLE RAV
Sbjct: 75 VTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIIIMLVGNKSDLEDERAVS 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFAEKE L F+ETSAL++TNVE AF TVL+EI++I SKK + + ++ G++
Sbjct: 135 TEDAKEFAEKENLFFLETSALQATNVESAFQTVLSEIFKIHSKKNIVTD--PKANGAAPP 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
L ++VPG E + CC S
Sbjct: 193 LAGKKVLVPGPAQEIPKS--KCCGS 215
>gi|242036665|ref|XP_002465727.1| hypothetical protein SORBIDRAFT_01g044550 [Sorghum bicolor]
gi|241919581|gb|EER92725.1| hypothetical protein SORBIDRAFT_01g044550 [Sorghum bicolor]
Length = 217
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 147/205 (71%), Positives = 173/205 (84%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQ+LARFAR+EFSLDSKATIGVEFQT+TLVI H++VKAQIWDTAGQERYRA
Sbjct: 16 LIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHRSVKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA+GA+LVYDIT+RQSFD++ RWL+ELR HADKNI+IMLVGNKSDLE RAV
Sbjct: 76 VTSAYYRGALGALLVYDITRRQSFDHIPRWLDELRAHADKNIVIMLVGNKSDLEEQRAVS 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFAEKE L F+ETSAL++TNVE AF TVLTEI++I SKK + + E +S G +
Sbjct: 136 TEDAKEFAEKENLFFLETSALQATNVESAFQTVLTEIFKIHSKKNMVS--EPKSNGVAPA 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ T ++VPG E + CC+S
Sbjct: 194 MAGTKVLVPGPAQEIPKS--KCCSS 216
>gi|1184985|gb|AAA87884.1| ATGB3 [Arabidopsis thaliana]
Length = 224
Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 145/206 (70%), Positives = 172/206 (83%), Gaps = 3/206 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQLLARFARDEFS+DSKATIGVEFQT+TL I K++KAQIWDTAGQERYRA
Sbjct: 22 LIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTAGQERYRA 81
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYD+TKR++F+++ RWLEELR HADKNI+I+L+GNKSDLE RAVP
Sbjct: 82 VTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSDLEDQRAVP 141
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFAEKEGL F+ETSAL +TNVE +F T++T+IY V+KK L + +S + GS
Sbjct: 142 TEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASECDSNNPGS--- 198
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
L I++PG E ++ CCTSS
Sbjct: 199 LAGKKILIPGSGQEIPAKTSTCCTSS 224
>gi|21617896|gb|AAM66946.1| GTP-binding protein GB3 [Arabidopsis thaliana]
Length = 224
Score = 298 bits (764), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 144/206 (69%), Positives = 171/206 (83%), Gaps = 3/206 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQLLARFARDEFS+DSKATIGVEFQT+TL I K++KAQIWDTAGQERYRA
Sbjct: 22 LIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTAGQERYRA 81
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYD+TKR++F+++ RWLEELR HADKNI+I+L+GNKSDLE RAVP
Sbjct: 82 VTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSDLEDQRAVP 141
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFAEKEGL F+ETSAL +TNVE +F T++T+IY V+KK L + +S + GS
Sbjct: 142 TEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASEGDSNNPGS--- 198
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
L I++P E ++ CCTSS
Sbjct: 199 LAGKKILIPASGQEIPAKTSTCCTSS 224
>gi|297798036|ref|XP_002866902.1| hypothetical protein ARALYDRAFT_490786 [Arabidopsis lyrata subsp.
lyrata]
gi|297312738|gb|EFH43161.1| hypothetical protein ARALYDRAFT_490786 [Arabidopsis lyrata subsp.
lyrata]
Length = 227
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 142/206 (68%), Positives = 169/206 (82%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQLLARFARDEFS+DSKATIGVEFQT+TL I K++KAQIWDTAGQERYRA
Sbjct: 22 LIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTAGQERYRA 81
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYD+TKR++F+++ RWLEELR HADKNI+I+L+GNKSDLE RAVP
Sbjct: 82 VTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSDLEDQRAVP 141
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFAEKEGL F+ETSAL +TNVE +F T++TEIY V+KK L + + +
Sbjct: 142 TEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTEIYNTVNKKNLASVENQGDSNNPGS 201
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
L IV+PG + ++ CC+SS
Sbjct: 202 LAGKKIVIPGSGQDIPAKTSTCCSSS 227
>gi|168016234|ref|XP_001760654.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162688014|gb|EDQ74393.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 221
Score = 295 bits (756), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 142/205 (69%), Positives = 170/205 (82%), Gaps = 3/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQLL+RF+R+EFSL+SKATIGVEFQT+T+V+ HK +KAQIWDTAGQERYRA
Sbjct: 20 LIGDSAVGKSQLLSRFSRNEFSLESKATIGVEFQTRTIVVDHKTIKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAM+VYDITK QSFD+V RWLEELR HAD NI+IML+GNKSDL LR V
Sbjct: 80 VTSAYYRGAVGAMVVYDITKEQSFDHVLRWLEELRAHADANIVIMLIGNKSDLSNLRQVE 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T+ A+E+AEK+GL F+ETSA+ESTNVE AF TVL+EIY+ VSKKAL A+ E+ G + L
Sbjct: 140 TDTAREYAEKQGLSFLETSAMESTNVETAFFTVLSEIYKTVSKKALIAD---ENQGGAPL 196
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
L T I + ++ G + CC+S
Sbjct: 197 LPGTKITLTDKDDVIGTKKAGCCSS 221
>gi|72384499|gb|AAZ67615.1| 80A08_30 [Brassica rapa subsp. pekinensis]
Length = 223
Score = 291 bits (746), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 145/206 (70%), Positives = 166/206 (80%), Gaps = 4/206 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKSQ+L+R+AR+EFSLDSKATIGVEFQT+TLV+ HK+VKAQIWDTAGQERYRA
Sbjct: 21 LIGDSGVGKSQILSRYARNEFSLDSKATIGVEFQTRTLVMDHKSVKAQIWDTAGQERYRA 80
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYD+T+RQ+FD++ RWLEELRGHADKNI+I+LVGNKSDLE RA+
Sbjct: 81 VTSAYYRGAVGAMLVYDVTRRQTFDHIPRWLEELRGHADKNIVIILVGNKSDLEDQRAIS 140
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFAE EGL F+ETSAL + NVE AF TVLTEI+ IV+KK L A E G
Sbjct: 141 TEDAKEFAETEGLFFLETSALNAVNVETAFSTVLTEIFNIVNKKNLVA---GEGNGDPGS 197
Query: 181 LKATNI-VVPGQEPESGRRSYNCCTS 205
L I +VPG +S CC S
Sbjct: 198 LAGKKIDIVPGPAQVVPTKSGMCCNS 223
>gi|168001936|ref|XP_001753670.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162695077|gb|EDQ81422.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 221
Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 141/205 (68%), Positives = 168/205 (81%), Gaps = 3/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQLL+RF+R+EFSL+SKATIGVEFQT+T+V+ HK +KAQIWDTAGQERYRA
Sbjct: 20 LIGDSAVGKSQLLSRFSRNEFSLESKATIGVEFQTRTIVVDHKTIKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYDITK+QSFD+V RWLEELR HAD NI+IML+GNKSDL LR V
Sbjct: 80 VTSAYYRGAVGAMLVYDITKQQSFDHVQRWLEELRAHADANIVIMLIGNKSDLSNLRQVD 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T+ A+ +AEKE L F+ETSA+ESTNVE AF VL+EIY+IVSK AL A+ E+ G + L
Sbjct: 140 TDVARVYAEKEKLSFLETSAMESTNVETAFYAVLSEIYKIVSKNALIAD---ENQGGTPL 196
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
L T I + ++ G + CC+S
Sbjct: 197 LSGTKINLTDKDDVIGSKRAGCCSS 221
>gi|297807067|ref|XP_002871417.1| hypothetical protein ARALYDRAFT_325580 [Arabidopsis lyrata subsp.
lyrata]
gi|297317254|gb|EFH47676.1| hypothetical protein ARALYDRAFT_325580 [Arabidopsis lyrata subsp.
lyrata]
Length = 226
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 140/205 (68%), Positives = 167/205 (81%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKSQ+L+R+AR+EFSLDSKATIGVEFQT+TLVI HK+VKAQIWDTAGQERYRA
Sbjct: 22 LIGDSGVGKSQILSRYARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTAGQERYRA 81
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYD+T+RQ+FD++ RWLEELR +ADKNI+I+LVGNKSDLE RA+
Sbjct: 82 VTSAYYRGAVGAMLVYDVTRRQTFDHIPRWLEELRNNADKNIVIILVGNKSDLEDQRAIS 141
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
EDAK+FAEKEGL F+ETSAL + NVE AF TVLTEI+ IV+KK+L A + +G SL
Sbjct: 142 MEDAKDFAEKEGLFFLETSALNAVNVESAFSTVLTEIFNIVNKKSLVAGEGEGNGDPGSL 201
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+VPG ++ CC +
Sbjct: 202 AGKKIDIVPGPGQVIPTKNKLCCNT 226
>gi|346464621|gb|AEO32155.1| hypothetical protein [Amblyomma maculatum]
Length = 184
Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 137/157 (87%), Positives = 145/157 (92%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQLLARFAR+EFSLDSKATIGVEFQT+TL I + VKAQIWDTAGQERYRA
Sbjct: 20 LIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLAIDKRTVKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYD+TKRQSFD+VARWL ELRGHADKNI+IML+GNKSDL TLRAVP
Sbjct: 80 VTSAYYRGAVGAMLVYDMTKRQSFDHVARWLNELRGHADKNIVIMLIGNKSDLGTLRAVP 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEI 157
TEDAKEFAE+E L FMETS LES NVE AF TVLTEI
Sbjct: 140 TEDAKEFAERENLFFMETSVLESXNVESAFQTVLTEI 176
>gi|302784965|ref|XP_002974254.1| rab family GTPase [Selaginella moellendorffii]
gi|300157852|gb|EFJ24476.1| rab family GTPase [Selaginella moellendorffii]
Length = 220
Score = 278 bits (712), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 132/181 (72%), Positives = 161/181 (88%), Gaps = 2/181 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQLL+RFARDEF+L+SK+TIGVEFQT+T+ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSAVGKSQLLSRFARDEFTLESKSTIGVEFQTRTISVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYDIT++Q+F++VARWLEELR HAD N++IM+VGNKSDL RA+
Sbjct: 76 VTSAYYRGAVGAMLVYDITRKQTFEHVARWLEELRNHADNNVVIMMVGNKSDLSNSRAMS 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+ +EF+EKEGL FMETSAL+STNVE AF TVLTEIY+IVSKK+L A+D +GG +++
Sbjct: 136 VEEGREFSEKEGLYFMETSALDSTNVETAFTTVLTEIYKIVSKKSLAADD--PNGGLANV 193
Query: 181 L 181
+
Sbjct: 194 M 194
>gi|302807861|ref|XP_002985624.1| rab family GTPase [Selaginella moellendorffii]
gi|300146533|gb|EFJ13202.1| rab family GTPase [Selaginella moellendorffii]
Length = 220
Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 131/181 (72%), Positives = 160/181 (88%), Gaps = 2/181 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQLL+RFARDEF+L+SK+TIGVEFQT+T+ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSAVGKSQLLSRFARDEFTLESKSTIGVEFQTRTISVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAMLVYDIT++Q+F++VARWLEELR HAD N++IM+VGNKSDL R +
Sbjct: 76 VTSAYYRGAVGAMLVYDITRKQTFEHVARWLEELRNHADNNVVIMMVGNKSDLSNSRTMS 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+ +EF+EKEGL FMETSAL+STNVE AF TVLTEIY+IVSKK+L A+D +GG +++
Sbjct: 136 VEEGREFSEKEGLYFMETSALDSTNVETAFTTVLTEIYKIVSKKSLAADD--PNGGLANV 193
Query: 181 L 181
+
Sbjct: 194 M 194
>gi|358249314|ref|NP_001240030.1| uncharacterized protein LOC100797258 [Glycine max]
gi|255645100|gb|ACU23049.1| unknown [Glycine max]
Length = 217
Score = 275 bits (703), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 131/206 (63%), Positives = 166/206 (80%), Gaps = 5/206 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF L+SK+TIGVEF T+TL + + VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGA+GA+LVYD+TK +F+NV+RWL+ELR HAD NI+IML+GNK+DL+ LRAV
Sbjct: 77 ITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVIMLIGNKTDLKHLRAVA 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA+ +AEKEGL F+ETSALE+TNVE AF T+L EIYRI+SKK+L++ND ++++
Sbjct: 137 TEDAQGYAEKEGLSFIETSALEATNVENAFQTILAEIYRIISKKSLSSNDP-----AANI 191
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
+K + G PE +CCTSS
Sbjct: 192 IKEGKTITVGGAPEPNTNKPSCCTSS 217
>gi|302805127|ref|XP_002984315.1| rab family GTPase [Selaginella moellendorffii]
gi|300148164|gb|EFJ14825.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 137/206 (66%), Positives = 162/206 (78%), Gaps = 13/206 (6%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQLLARF+R+EF+L+SKATIGVEFQT+T+V+ HK +KAQIWDTAGQERYRA
Sbjct: 19 LIGDSAVGKSQLLARFSRNEFTLESKATIGVEFQTRTMVVDHKTIKAQIWDTAGQERYRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDITKR +F++V RWLEEL+ HAD NI++MLVGNKSDL LRAV
Sbjct: 79 ITSAYYRGAVGALVVYDITKRPTFEHVTRWLEELKVHADNNIVVMLVGNKSDLGNLRAVS 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+AK+ AE+E L FMETSALE+TNV+ AF +VLTEIYRIVSKK+L SE G S
Sbjct: 139 VEEAKDLAEREELFFMETSALEATNVDSAFFSVLTEIYRIVSKKSL-----SEGAGGSQ- 192
Query: 181 LKATNIVVPGQE---PESGRRSYNCC 203
I +PG E CC
Sbjct: 193 ----QIPIPGTTLLLSEKKESKTGCC 214
>gi|302781422|ref|XP_002972485.1| rab family GTPase [Selaginella moellendorffii]
gi|300159952|gb|EFJ26571.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 136/206 (66%), Positives = 162/206 (78%), Gaps = 13/206 (6%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQLLARF+R+EF+L+SKATIGVEFQT+T+V+ HK +KAQIWDTAGQERYRA
Sbjct: 19 LIGDSAVGKSQLLARFSRNEFTLESKATIGVEFQTRTMVVDHKTIKAQIWDTAGQERYRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDITKR +F++V RWLEEL+ HAD NI++MLVGNKSDL LRAV
Sbjct: 79 ITSAYYRGAVGALVVYDITKRPTFEHVTRWLEELKVHADNNIVVMLVGNKSDLGNLRAVS 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+AK+ AE+E L FMETSALE+TNV+ AF +VLTEIYRIVSKK+L SE G S
Sbjct: 139 VEEAKDLAEREELFFMETSALEATNVDSAFFSVLTEIYRIVSKKSL-----SEGAGGSQ- 192
Query: 181 LKATNIVVPGQE---PESGRRSYNCC 203
+ +PG E CC
Sbjct: 193 ----QVPIPGTTLLLSEKKESKTGCC 214
>gi|356551598|ref|XP_003544161.1| PREDICTED: ras-related protein Rab2BV-like [Glycine max]
Length = 216
Score = 272 bits (695), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 134/205 (65%), Positives = 159/205 (77%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+TL + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITKRQ+FDNV RWL ELR HAD NI+IM+ GNKSDL LRAV
Sbjct: 77 ITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLNHLRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA+ AE+EGL F+ETSALE+ NVE AF T+L +IY I+SKKAL A E+ S+ L
Sbjct: 137 TEDAQSLAEREGLSFLETSALEAYNVEKAFQTILFDIYHIISKKALAA---QEANSSTGL 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ T I V +G RS CC++
Sbjct: 194 PQGTTINVSNMSSNAGNRS--CCSN 216
>gi|224109432|ref|XP_002315193.1| predicted protein [Populus trichocarpa]
gi|222864233|gb|EEF01364.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 272 bits (695), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 133/205 (64%), Positives = 160/205 (78%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF LDSK+TIGVEF T+TL + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNEFCLDSKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITKRQ+FDNV RWL ELR HAD NI+IML GNKSDL LR+V
Sbjct: 77 ITSAYYRGAVGALLVYDITKRQTFDNVRRWLRELRDHADSNIVIMLAGNKSDLNHLRSVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
EDA+ AEKEGL F+ETSALE++NVE AF T+L +IY+I+SKKALTA E+ S+ L
Sbjct: 137 AEDAQTLAEKEGLSFLETSALEASNVEKAFQTILLDIYQIISKKALTAQ---EAANSTGL 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ T I + +R+ CC++
Sbjct: 194 PQGTTITIANLSSNINKRA--CCSN 216
>gi|307102647|gb|EFN50917.1| hypothetical protein CHLNCDRAFT_33302 [Chlorella variabilis]
Length = 217
Score = 271 bits (694), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 135/206 (65%), Positives = 164/206 (79%), Gaps = 5/206 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITK+ +F+NV RWL+ELR HAD NI+IMLVGNKSDL LR+V
Sbjct: 77 ITSAYYRGAVGALLVYDITKQTTFENVERWLKELRDHADANIVIMLVGNKSDLRHLRSVQ 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAK F E+EGL F+ETSALE+TNVE AF +LTEIY IVSKKAL SE G +++
Sbjct: 137 TEDAKAFCEREGLSFIETSALEATNVEQAFQRILTEIYHIVSKKALA----SEDGPAAAP 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
T I V PE+ ++S CC+S+
Sbjct: 193 TSGTAIKVTEAAPEAKKKS-TCCSSA 217
>gi|238483611|ref|XP_002373044.1| Ras GTPase Rab11, putative [Aspergillus flavus NRRL3357]
gi|220701094|gb|EED57432.1| Ras GTPase Rab11, putative [Aspergillus flavus NRRL3357]
gi|391870993|gb|EIT80162.1| GTPase Rab11/YPT3, small G protein superfamily [Aspergillus oryzae
3.042]
Length = 211
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 131/204 (64%), Positives = 162/204 (79%), Gaps = 7/204 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q++DNV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESG-GSSS 179
TE+AK+FA + L F+ETSAL+++NVELAF +LTEIYRIVS KAL + D ++G G
Sbjct: 134 TEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDSGQAGLGDRR 193
Query: 180 LLKATNIVVPGQEPESGRRSYNCC 203
+ N P Q+PE+ + CC
Sbjct: 194 PVVDIN---PSQDPETKQ---GCC 211
>gi|351728017|ref|NP_001235133.1| uncharacterized protein LOC100499980 [Glycine max]
gi|255628259|gb|ACU14474.1| unknown [Glycine max]
Length = 216
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 131/206 (63%), Positives = 168/206 (81%), Gaps = 6/206 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF L+SK+TIGVEF T+TL + VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGGTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGA+GA+LVYD+TK +F+NV+RWL+ELR HAD NI+IML+GNK+DL+ LRAV
Sbjct: 77 ITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVIMLIGNKTDLKHLRAVA 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA+ ++EKEGL F+ETSALE+TNVE AF T+L EIYRI+SKK+L++N+ + S+++
Sbjct: 137 TEDAQGYSEKEGLSFIETSALEATNVEKAFQTILAEIYRIISKKSLSSNEPA----SANI 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
++ I V G P+S +CCTSS
Sbjct: 193 KESMTITVGG--PQSNASKPSCCTSS 216
>gi|357125866|ref|XP_003564610.1| PREDICTED: ras-related protein Rab11C-like [Brachypodium
distachyon]
Length = 216
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 133/205 (64%), Positives = 164/205 (80%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+TL I K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIDGKTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LV+DITKRQ+FDNV RWL ELR HAD NI++M+VGNKSDL LR+VP
Sbjct: 77 ITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVVMMVGNKSDLNHLRSVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
ED++ F+EKE L F+ETSALE+ NVE AF TVL+EI++IVSKKAL A + + + G S
Sbjct: 137 EEDSQAFSEKESLSFLETSALEAINVEKAFHTVLSEIHQIVSKKALAAQESASANGRS-- 194
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
++ T I V EP + + +CC+S
Sbjct: 195 MQGTTINVA--EPSTNTKG-SCCSS 216
>gi|83765744|dbj|BAE55887.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 221
Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 130/204 (63%), Positives = 162/204 (79%), Gaps = 7/204 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LD+K+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 24 LIGDSGVGKSNLLSRFTRNEFNLDTKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 83
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q++DNV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 84 ITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 143
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESG-GSSS 179
TE+AK+FA + L F+ETSAL+++NVELAF +LTEIYRIVS KAL + D ++G G
Sbjct: 144 TEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDSGQAGLGDRR 203
Query: 180 LLKATNIVVPGQEPESGRRSYNCC 203
+ N P Q+PE+ + CC
Sbjct: 204 PVVDIN---PSQDPETKQ---GCC 221
>gi|317139974|ref|XP_001817889.2| Ras-related protein Rab-11A [Aspergillus oryzae RIB40]
Length = 211
Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 130/204 (63%), Positives = 162/204 (79%), Gaps = 7/204 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LD+K+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDTKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q++DNV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESG-GSSS 179
TE+AK+FA + L F+ETSAL+++NVELAF +LTEIYRIVS KAL + D ++G G
Sbjct: 134 TEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDSGQAGLGDRR 193
Query: 180 LLKATNIVVPGQEPESGRRSYNCC 203
+ N P Q+PE+ + CC
Sbjct: 194 PVVDIN---PSQDPETKQ---GCC 211
>gi|449431866|ref|XP_004133721.1| PREDICTED: ras-related protein RABA2a-like [Cucumis sativus]
Length = 216
Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 130/206 (63%), Positives = 167/206 (81%), Gaps = 6/206 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF L+SK+TIGVEF T+TL + + VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGA+GA+LVYD+TK +FDNV+RWL+ELR HAD NI+IML+GNK+DL+ LRAV
Sbjct: 77 ITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVA 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA+ +AEKEGL F+ETSALE+TNVE AF T+L+EIYRI+SKK+L SE +++
Sbjct: 137 TEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLN----SEEPAAANN 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
+K +V G+ + +++ CC+SS
Sbjct: 193 IKEGKTIVVGESEANTKKA--CCSSS 216
>gi|440638900|gb|ELR08819.1| Ras-like protein Rab-11A [Geomyces destructans 20631-21]
Length = 212
Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 128/203 (63%), Positives = 159/203 (78%), Gaps = 4/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK+FA GL F+ETSAL+++NVELAF +LTEIYRIVS KAL + D G +++
Sbjct: 134 TEEAKQFASDNGLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGD----GAQANI 189
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
TNI + + + CC
Sbjct: 190 GAGTNISLSKPADDGSAKGGKCC 212
>gi|432958664|ref|XP_004086096.1| PREDICTED: ras-related protein Rab-11A-like isoform 1 [Oryzias
latipes]
Length = 215
Score = 269 bits (687), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 130/203 (64%), Positives = 161/203 (79%), Gaps = 6/203 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAEK GL F+ETSAL+STNVE AF T+LTEIYRIVS+K ++ ES+ S+++
Sbjct: 136 TDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQMSERQESDMSPSNNV 195
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ NI VP P + CC
Sbjct: 196 V---NIQVP---PTENKPKMQCC 212
>gi|115441051|ref|NP_001044805.1| Os01g0848700 [Oryza sativa Japonica Group]
gi|15408893|dbj|BAB64284.1| putative Ras-related GTP-binding protein RAB11C [Oryza sativa
Japonica Group]
gi|113534336|dbj|BAF06719.1| Os01g0848700 [Oryza sativa Japonica Group]
gi|125528382|gb|EAY76496.1| hypothetical protein OsI_04436 [Oryza sativa Indica Group]
gi|125572634|gb|EAZ14149.1| hypothetical protein OsJ_04079 [Oryza sativa Japonica Group]
gi|215700996|dbj|BAG92420.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 216
Score = 269 bits (687), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 133/205 (64%), Positives = 163/205 (79%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+TL I K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNEFFLESKSTIGVEFATRTLQIEGKTIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LV+DITKRQ+FDNV RWL ELR HAD NI++M+VGNKSDL LR+VP
Sbjct: 77 ITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVVMMVGNKSDLNHLRSVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
ED F+EKEGL F+ETSALE+ NVE AF TVL+EI++IVSKKAL A + + + G S
Sbjct: 137 EEDGHAFSEKEGLSFLETSALEAINVEKAFHTVLSEIHQIVSKKALAAQESASTNGRS-- 194
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
++ T I V + P + + S CC+S
Sbjct: 195 MQGTTINV-AEAPAATKGS--CCSS 216
>gi|224120066|ref|XP_002331128.1| predicted protein [Populus trichocarpa]
gi|222872856|gb|EEF09987.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 268 bits (686), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 129/205 (62%), Positives = 165/205 (80%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+TL + + VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGA+GA+LVYD+TK +F+NV+RWL+ELR HAD NI+IML+GNK+DL+ LRAV
Sbjct: 77 ITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVA 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA+ +AEKEGL F+ETSALE+TNV+ AF T+L+EIYRI+SKK L++ ES S+
Sbjct: 137 TEDAQSYAEKEGLAFVETSALEATNVDKAFQTILSEIYRIISKKTLSSE---ESAAPVSV 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
IVV G +P + + + CC+S
Sbjct: 194 KDGKTIVVGGPDPSTKKTT--CCSS 216
>gi|3024502|sp|Q40194.1|RB11D_LOTJA RecName: Full=Ras-related protein Rab11D
gi|1370148|emb|CAA98180.1| RAB11D [Lotus japonicus]
Length = 218
Score = 268 bits (686), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 132/205 (64%), Positives = 161/205 (78%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EF+L+SK+TIGVEF TKTL + K VKAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAKVVKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+R +F+N ARWL+ELR H D NI++ML+GNKSDL L AVP
Sbjct: 78 ITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED K FAE+E L FMETSALE+TNVE AF VLT+IYRIVSK+A+ A D GSSS
Sbjct: 138 TEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSKRAVEAGDS----GSSSG 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
L + + +E S + + CC++
Sbjct: 194 LPSKGQTINVKEDSSVLKRFGCCST 218
>gi|154303550|ref|XP_001552182.1| hypothetical protein BC1G_09346 [Botryotinia fuckeliana B05.10]
gi|347840921|emb|CCD55493.1| similar to ras-related protein rab-11b [Botryotinia fuckeliana]
Length = 213
Score = 268 bits (685), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 128/204 (62%), Positives = 162/204 (79%), Gaps = 5/204 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK+FA + L F+ETSAL+++NVELAF +LTEIYRIVS+KAL D ++ +++
Sbjct: 134 TEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALDNGDSAQ----ATI 189
Query: 181 LKATNI-VVPGQEPESGRRSYNCC 203
TNI + P E+ + CC
Sbjct: 190 ASGTNITLTPPPSDEAAKGGGKCC 213
>gi|296422463|ref|XP_002840780.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637003|emb|CAZ84971.1| unnamed protein product [Tuber melanosporum]
Length = 212
Score = 268 bits (685), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 133/205 (64%), Positives = 158/205 (77%), Gaps = 8/205 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDTKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K+ ++DNV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDISKQITYDNVTRWLKELRDHADNNIVIMLVGNKSDLRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESE--SGGSS 178
TEDAK FA + L F+ETSAL+STNVELAF T+LTEIYRIVS KAL D+ + GSS
Sbjct: 134 TEDAKNFAAENHLSFIETSALDSTNVELAFQTILTEIYRIVSSKALDGGDQHQVSQPGSS 193
Query: 179 SLLKATNIVVPGQEPESGRRSYNCC 203
L T E+ + CC
Sbjct: 194 QPLHIT------PTAENSTKDTKCC 212
>gi|356544190|ref|XP_003540537.1| PREDICTED: ras-related protein RABA4c-like [Glycine max]
Length = 228
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 125/207 (60%), Positives = 167/207 (80%), Gaps = 3/207 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+ GDS VGKSQLL RF ++EF + SK TIGVEF T+T+V+ HK VKAQIWDTAGQERY+A
Sbjct: 20 MTGDSGVGKSQLLNRFVKNEFHMKSKPTIGVEFLTRTVVMDHKLVKAQIWDTAGQERYQA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T+AYYRGA GA+L YDITK+Q+FD+V +WL+ELR HADKNI++MLVGNKSDL +LRAVP
Sbjct: 80 ITTAYYRGATGALLAYDITKQQTFDHVEKWLDELRIHADKNILVMLVGNKSDLSSLRAVP 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE A++FA++EGL F+ETSAL+S+NVE AF+ +L+++YR VS+K + + + +L
Sbjct: 140 TEVARDFAQQEGLFFLETSALDSSNVESAFIGLLSQVYRTVSRKHILVDGHESNWDKVNL 199
Query: 181 -LKATNIVVPGQEPE--SGRRSYNCCT 204
L+ T I VP QEPE + ++ +NCC+
Sbjct: 200 ELEGTKIKVPSQEPECQNAKKRFNCCS 226
>gi|449300707|gb|EMC96719.1| hypothetical protein BAUCODRAFT_487092 [Baudoinia compniacensis
UAMH 10762]
Length = 212
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 129/204 (63%), Positives = 159/204 (77%), Gaps = 6/204 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDTKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADNNIVIMLVGNKSDLRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AKEFA + GL F+ETSAL+++NVELAF LTEIYRIVS KA+ + S+ G
Sbjct: 134 TEEAKEFASQNGLSFIETSALDASNVELAFQNELTEIYRIVSSKAIEQGEPSQGPG---- 189
Query: 181 LKATNIVV-PGQEPESGRRSYNCC 203
+ T+I + P P + CC
Sbjct: 190 -QGTSIPLGPSHPPGDASKKGQCC 212
>gi|384247834|gb|EIE21319.1| ras-related protein Rab2BV [Coccomyxa subellipsoidea C-169]
Length = 214
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 132/204 (64%), Positives = 161/204 (78%), Gaps = 7/204 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITK+ +F+NV RWL+ELR HAD NI+IMLVGNKSDL LR+V
Sbjct: 77 ITSAYYRGAVGALLVYDITKQVTFENVERWLKELRDHADSNIVIMLVGNKSDLRHLRSVQ 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T+D++ F EKEGL F+ETSALESTNVE AF +LTEIY IVSKKAL + D+ +
Sbjct: 137 TDDSQAFCEKEGLSFIETSALESTNVEQAFQRILTEIYHIVSKKALASEDKPQPD----- 191
Query: 181 LKATNIVVPGQEPESGRRSYNCCT 204
K T IVV +PE ++S CC+
Sbjct: 192 -KGTRIVVSETQPEEKKKS-ACCS 213
>gi|255570960|ref|XP_002526431.1| protein with unknown function [Ricinus communis]
gi|223534211|gb|EEF35926.1| protein with unknown function [Ricinus communis]
Length = 215
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 131/206 (63%), Positives = 166/206 (80%), Gaps = 7/206 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF L+SK+TIGVEF T+TL + + VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGA+GA+LVYD+TK +F+NV+RWL+ELR HAD NI+IML+GNK+DL+ LRAV
Sbjct: 77 ITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVIMLIGNKTDLKHLRAVA 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA+ +AE+EGL F+ETSALE+TNVE AF T+L+EIYRI+SKK+LT SE +++
Sbjct: 137 TEDAQGYAEREGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLT----SEEPAPANI 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
+ IVV G E + + CC+SS
Sbjct: 193 KEGKMIVVGGSEANTKK---PCCSSS 215
>gi|322707693|gb|EFY99271.1| Ras GTPase Rab11, putative [Metarhizium anisopliae ARSEF 23]
Length = 212
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 128/203 (63%), Positives = 159/203 (78%), Gaps = 4/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK FA + L F+ETSAL+++NVELAF +LTEIYRIVS KAL + D G +++
Sbjct: 134 TEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGD----GAQATI 189
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
TNI + + +S CC
Sbjct: 190 GAGTNISLSKPADDESAKSGKCC 212
>gi|453087907|gb|EMF15948.1| ras GTPase Rab11 [Mycosphaerella populorum SO2202]
Length = 213
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 134/207 (64%), Positives = 163/207 (78%), Gaps = 11/207 (5%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + +K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+L YD+TK Q+FDNV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 74 ITSAYYRGAVGALLCYDLTKSQTFDNVTRWLKELRDHADTNIVIMLVGNKSDLRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESG----G 176
T+DAK FA + GL F+ETSAL+++NVELAF LTEIYRIVS KAL ND +G G
Sbjct: 134 TDDAKAFAAENGLSFIETSALDASNVELAFQQELTEIYRIVSSKALD-NDAGSAGAPGQG 192
Query: 177 SSSLLKATNIVVPGQEPESGRRSYNCC 203
+S L ++N PG + + G+ CC
Sbjct: 193 TSIPLSSSN--PPGGDAKKGQ----CC 213
>gi|156063958|ref|XP_001597901.1| hypothetical protein SS1G_02097 [Sclerotinia sclerotiorum 1980]
gi|154697431|gb|EDN97169.1| hypothetical protein SS1G_02097 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 213
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 128/204 (62%), Positives = 162/204 (79%), Gaps = 5/204 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK+FA + L F+ETSAL+++NVELAF +LTEIYRIVS+KAL D ++ +++
Sbjct: 134 TEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALDNGDSAQ----ATI 189
Query: 181 LKATNI-VVPGQEPESGRRSYNCC 203
TNI + P E+ + CC
Sbjct: 190 GSGTNITLTPPPSDEAAKGGGKCC 213
>gi|429848505|gb|ELA23977.1| ras GTPase [Colletotrichum gloeosporioides Nara gc5]
Length = 212
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 128/203 (63%), Positives = 159/203 (78%), Gaps = 4/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK FA + L F+ETSAL+++NVELAF +LTEIYRIVS KAL + D G +S+
Sbjct: 134 TEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGD----GAQASI 189
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+I + +S +S CC
Sbjct: 190 GTGPSIALSKPADDSAEKSGKCC 212
>gi|225465200|ref|XP_002264444.1| PREDICTED: ras-related protein RABA2a [Vitis vinifera]
gi|297739506|emb|CBI29688.3| unnamed protein product [Vitis vinifera]
Length = 215
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 129/205 (62%), Positives = 165/205 (80%), Gaps = 7/205 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF L+SK+TIGVEF T+TL + + VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGA+GA+LVYD+TK +F+NV+RWL+ELR HAD NI+IML+GNK+DL+ LRAV
Sbjct: 77 ITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVA 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA+ FAEKEGL F+ETSALE+TNVE AF T+L EIYRI+SKK L+++D + +G +
Sbjct: 137 TEDAQGFAEKEGLSFIETSALEATNVEKAFQTILGEIYRIISKKTLSSDDPAPAG----I 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ +VV G + + + CC+S
Sbjct: 193 KEGKTLVVDGSDTNTKK---TCCSS 214
>gi|340515772|gb|EGR46024.1| Ras-GTPase [Trichoderma reesei QM6a]
Length = 209
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 127/203 (62%), Positives = 159/203 (78%), Gaps = 4/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 11 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 70
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 71 ITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVP 130
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK FA + L F+ETSAL+++NVELAF +LTEIYRIVS KAL + D G +++
Sbjct: 131 TDEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGD----GAQATI 186
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
TNI + + +S CC
Sbjct: 187 GAGTNISLSKAADDEASKSGKCC 209
>gi|357445241|ref|XP_003592898.1| Ras-related protein RABA2a [Medicago truncatula]
gi|92893896|gb|ABE91946.1| Ras GTPase; Sigma-54 factor, interaction region [Medicago
truncatula]
gi|355481946|gb|AES63149.1| Ras-related protein RABA2a [Medicago truncatula]
Length = 220
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 132/206 (64%), Positives = 163/206 (79%), Gaps = 6/206 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF L+SK+TIGVEF T+TL + + VKAQIWDTAGQERYRA
Sbjct: 20 LIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGA+GA+LVYD+TK +FDNV RWL+ELR HAD NI+IML+GNK+DL+ LRAV
Sbjct: 80 ITSAYYRGALGALLVYDVTKPTTFDNVTRWLKELRDHADANIVIMLIGNKTDLKHLRAVA 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL-TANDESESGGSSS 179
TEDA+ +AEKEGL F+ETSALE+TNVE AF T L EIYRI+SKK+L TAN E +++
Sbjct: 140 TEDAQSYAEKEGLSFIETSALEATNVEKAFQTTLGEIYRIISKKSLSTAN---EPAAAAN 196
Query: 180 LLKATNIVVPGQEPESGRRSYNCCTS 205
+ + I + G E + + CCTS
Sbjct: 197 IKEGKTIAIGGSETTNTNKP--CCTS 220
>gi|388491774|gb|AFK33953.1| unknown [Medicago truncatula]
Length = 215
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 133/205 (64%), Positives = 157/205 (76%), Gaps = 6/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+TL + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITKRQ+FDNV RWL ELR HAD NI+IM+ GNKSDL LRAV
Sbjct: 77 ITSAYYRGAVGALLVYDITKRQTFDNVNRWLRELRDHADSNIVIMMAGNKSDLNHLRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
+D + AEKEGL F+ETSALE+TN+E AF T+LTEIY IVSKKAL A E+ G+S
Sbjct: 137 EDDGQALAEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQ---EAAGTSLP 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ T I V + R CC++
Sbjct: 194 GQGTTINVADSSANTKR---GCCST 215
>gi|255634658|gb|ACU17691.1| unknown [Glycine max]
Length = 228
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 124/207 (59%), Positives = 167/207 (80%), Gaps = 3/207 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+ GDS VGKSQLL RF ++EF + SK TIG+EF T+T+V+ HK VKAQIWDTAGQERY+A
Sbjct: 20 MTGDSGVGKSQLLNRFVKNEFHMKSKPTIGMEFLTRTVVMDHKLVKAQIWDTAGQERYQA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T+AYYRGA GA+L YDITK+Q+FD+V +WL+ELR HADKNI++MLVGNKSDL +LRAVP
Sbjct: 80 ITTAYYRGATGALLAYDITKQQTFDHVEKWLDELRIHADKNILVMLVGNKSDLSSLRAVP 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE A++FA++EGL F+ETSAL+S+NVE AF+ +L+++YR VS+K + + + +L
Sbjct: 140 TEVARDFAQQEGLFFLETSALDSSNVESAFIGLLSQVYRTVSRKHILVDGHESNWDKVNL 199
Query: 181 -LKATNIVVPGQEPE--SGRRSYNCCT 204
L+ T I VP QEPE + ++ +NCC+
Sbjct: 200 ELEGTKIKVPSQEPECQNAKKRFNCCS 226
>gi|378734873|gb|EHY61332.1| Ras-like protein Rab-11B [Exophiala dermatitidis NIH/UT8656]
Length = 210
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 127/203 (62%), Positives = 160/203 (78%), Gaps = 6/203 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDTKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+KRQ++DNV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDISKRQTYDNVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK+FA + L F+ETSAL+++NVELAF +LTEIYRIVS KAL + D +++
Sbjct: 134 TEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDAAQAPTGGVK 193
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ + P P++ + CC
Sbjct: 194 ID----MAPSGTPDA--KGNKCC 210
>gi|348542088|ref|XP_003458518.1| PREDICTED: ras-related protein Rab-11A-like [Oreochromis niloticus]
gi|410912336|ref|XP_003969646.1| PREDICTED: ras-related protein Rab-11A-like [Takifugu rubripes]
Length = 215
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 129/203 (63%), Positives = 161/203 (79%), Gaps = 6/203 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAEK GL F+ETSAL+STNVE AF T+LTEIYRIVS+K ++ ES+ S+++
Sbjct: 136 TDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQMSERQESDMSPSNNV 195
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ NI V +P + CC
Sbjct: 196 V---NIQV---QPTENKPKMQCC 212
>gi|400598893|gb|EJP66600.1| Ras family protein [Beauveria bassiana ARSEF 2860]
Length = 212
Score = 266 bits (679), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 127/203 (62%), Positives = 158/203 (77%), Gaps = 4/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK FA + L F+ETSAL+++NVELAF +LTEIYRIVS KAL + D G +++
Sbjct: 134 TEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGD----GAQATI 189
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
TNI + + + CC
Sbjct: 190 GAGTNISLSKPADDDASKGGKCC 212
>gi|168008990|ref|XP_001757189.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162691687|gb|EDQ78048.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 134/203 (66%), Positives = 161/203 (79%), Gaps = 5/203 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITK +++NV RWL+ELR HAD NI+IMLVGNKSDL+ LR VP
Sbjct: 77 ITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIMLVGNKSDLKHLRGVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T+DA+ F+EKEGL F+ETSALESTNVE AF +LTEIYRIVSKKAL A++ES + G
Sbjct: 137 TDDAQAFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKAL-ASEESTTEGPG-- 193
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ TNI VP + CC
Sbjct: 194 -QGTNI-VPLDSNSPDLKKKGCC 214
>gi|452846261|gb|EME48194.1| hypothetical protein DOTSEDRAFT_69969 [Dothistroma septosporum
NZE10]
Length = 212
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 126/203 (62%), Positives = 159/203 (78%), Gaps = 4/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + +K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDISKHNTYENVTRWLKELRDHADTNIVIMLVGNKSDLRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK+FA + GL F+ETSAL+++NVELAF LTEIYRIVS KAL +++ S
Sbjct: 134 TEEAKQFASENGLSFIETSALDASNVELAFQNELTEIYRIVSSKALDQGEQTAGPSQGSA 193
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ ++ PG + G+ CC
Sbjct: 194 IPLSSSTPPGDATKKGQ----CC 212
>gi|169597663|ref|XP_001792255.1| hypothetical protein SNOG_01620 [Phaeosphaeria nodorum SN15]
gi|160707568|gb|EAT91269.2| hypothetical protein SNOG_01620 [Phaeosphaeria nodorum SN15]
Length = 215
Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 128/203 (63%), Positives = 161/203 (79%), Gaps = 4/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 77 ITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK+FA + L F+ETSAL+++NVELAF +LTEIYRIVS KAL D+ E GG + L
Sbjct: 137 TEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKAL---DQGE-GGQNVL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
++ + + G++ CC
Sbjct: 193 GGERKVLEISKSADEGQKKNGCC 215
>gi|449478127|ref|XP_004155229.1| PREDICTED: ras-related protein RABA2a-like [Cucumis sativus]
Length = 220
Score = 265 bits (678), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 128/203 (63%), Positives = 164/203 (80%), Gaps = 6/203 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF L+SK+TIGVEF T+TL + + VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGA+GA+LVYD+TK +FDNV+RWL+ELR HAD NI+IML+GNK+DL+ LRAV
Sbjct: 77 ITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVA 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA+ +AEKEGL F+ETSALE+TNVE AF T+L+EIYRI+SKK+L SE +++
Sbjct: 137 TEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLN----SEEPAAANN 192
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+K +V G+ + +++ CC
Sbjct: 193 IKEGKTIVVGESEANTKKA--CC 213
>gi|302415737|ref|XP_003005700.1| GTP-binding protein ypt3 [Verticillium albo-atrum VaMs.102]
gi|261355116|gb|EEY17544.1| GTP-binding protein ypt3 [Verticillium albo-atrum VaMs.102]
gi|346973752|gb|EGY17204.1| GTP-binding protein ypt3 [Verticillium dahliae VdLs.17]
Length = 212
Score = 265 bits (678), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 126/203 (62%), Positives = 159/203 (78%), Gaps = 4/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK FA + L F+ETSAL+++NVELAF +LTEIYRIVS KAL + D G +++
Sbjct: 134 TEEAKAFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGD----GAQANI 189
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
T++ + E+ + CC
Sbjct: 190 AAGTSLSLSKPADENADKGGKCC 212
>gi|413951936|gb|AFW84585.1| ras protein Rab11C [Zea mays]
Length = 345
Score = 265 bits (677), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 127/188 (67%), Positives = 153/188 (81%), Gaps = 2/188 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+ L I K VKAQIWDTAGQERYRA
Sbjct: 146 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRNLQIDGKTVKAQIWDTAGQERYRA 205
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITK+QSFD+V RWL ELRGHAD NI++M+VGNKSDL LR+VP
Sbjct: 206 ITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRGHADANIVVMMVGNKSDLNHLRSVP 265
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
ED + F+EKEGL F+ETSALE+ NVE AF T+L+EI++ VSKKAL A + + G S
Sbjct: 266 EEDGRAFSEKEGLSFLETSALEAINVEKAFHTILSEIHQTVSKKALAAQASASTNGRS-- 323
Query: 181 LKATNIVV 188
++ T I V
Sbjct: 324 MQGTTINV 331
>gi|406863148|gb|EKD16196.1| Ras GTPase [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 212
Score = 265 bits (677), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 128/203 (63%), Positives = 160/203 (78%), Gaps = 4/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK+FA + L F+ETSAL+++NVELAF +LTEIYRIVS+KAL D ES +++
Sbjct: 134 TEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKAL---DNGES-AQANI 189
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
TNI + + + CC
Sbjct: 190 GAGTNISLSKPADDGAAKGGKCC 212
>gi|302901691|ref|XP_003048490.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729423|gb|EEU42777.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 212
Score = 265 bits (677), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 126/203 (62%), Positives = 159/203 (78%), Gaps = 4/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK FA + L F+ETSAL+++NVELAF +LTEIYRIVS KAL + D ++ +++
Sbjct: 134 TEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDSAQ----ATI 189
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
TNI + + + CC
Sbjct: 190 GAGTNISLSKPADDDASKGGKCC 212
>gi|212532303|ref|XP_002146308.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|212532305|ref|XP_002146309.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|242775273|ref|XP_002478610.1| Ras GTPase Rab11, putative [Talaromyces stipitatus ATCC 10500]
gi|210071672|gb|EEA25761.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|210071673|gb|EEA25762.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|218722229|gb|EED21647.1| Ras GTPase Rab11, putative [Talaromyces stipitatus ATCC 10500]
Length = 211
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 130/203 (64%), Positives = 161/203 (79%), Gaps = 5/203 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q++DNV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDISKHQTYDNVTRWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAK+FA + L F+ETSAL+++NVELAF +LTEIYRIVS KAL D+ E GG + L
Sbjct: 134 TEDAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKAL---DQGE-GGQNPL 189
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ +V + ++ + CC
Sbjct: 190 GERRQVVEISKTQDTETKQ-GCC 211
>gi|224086271|ref|XP_002307838.1| predicted protein [Populus trichocarpa]
gi|222853814|gb|EEE91361.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 133/211 (63%), Positives = 152/211 (72%), Gaps = 17/211 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+TL + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA LVYDITKRQ+FDNV RWL ELR HAD NI+IM+ GNKSDL LRAV
Sbjct: 77 ITSAYYRGAVGAFLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLNHLRAVQ 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
ED AEKEGL F+ETSALE+TN+E AF T+LTEIY I+SKK L A +
Sbjct: 137 EEDGHALAEKEGLSFLETSALEATNIEKAFQTILTEIYHIISKKTLAAQE---------- 186
Query: 181 LKATNIVVPGQ------EPESGRRSYNCCTS 205
A N VPGQ SG CC++
Sbjct: 187 -AAANSTVPGQGTTINVADASGNTKKGCCST 216
>gi|351722131|ref|NP_001238001.1| uncharacterized protein LOC100527312 [Glycine max]
gi|255632063|gb|ACU16384.1| unknown [Glycine max]
Length = 214
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 123/207 (59%), Positives = 166/207 (80%), Gaps = 3/207 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
++GDS VGKSQLL RF ++EF + SK TIGVEF T+T+V+ HK VKAQIWDTAGQERY+A
Sbjct: 6 MVGDSGVGKSQLLNRFVKNEFHMKSKPTIGVEFLTRTVVMDHKLVKAQIWDTAGQERYQA 65
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T+AYYRGA A+L YDITK+Q+FD+V +WL+ELR H DKNI++MLVGNKSDL +LRAVP
Sbjct: 66 ITTAYYRGATCALLAYDITKQQTFDHVEKWLDELRIHTDKNILVMLVGNKSDLSSLRAVP 125
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE A++FA++EGL F+ETSAL+S+NVE AF+ +L+++YR VS+K + + + +L
Sbjct: 126 TEVARDFAQQEGLFFLETSALDSSNVESAFIGLLSQVYRTVSRKLILVDGHESNWDKVNL 185
Query: 181 -LKATNIVVPGQEPE--SGRRSYNCCT 204
L+ T I VP QEPE + ++ +NCC+
Sbjct: 186 ELEGTKIKVPSQEPECQNAKKRFNCCS 212
>gi|389640453|ref|XP_003717859.1| Ras-like protein Rab-11A [Magnaporthe oryzae 70-15]
gi|351640412|gb|EHA48275.1| Ras-like protein Rab-11A [Magnaporthe oryzae 70-15]
gi|440469695|gb|ELQ38797.1| GTP-binding protein ypt3 [Magnaporthe oryzae Y34]
gi|440479119|gb|ELQ59905.1| GTP-binding protein ypt3 [Magnaporthe oryzae P131]
Length = 211
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 128/204 (62%), Positives = 160/204 (78%), Gaps = 7/204 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK FA + L F+ETSA +++NVELAF +LTEIYRIVS KAL +SG + S+
Sbjct: 134 TEEAKAFASENHLSFIETSAFDASNVELAFQNILTEIYRIVSSKAL------DSGDTPSM 187
Query: 181 LK-ATNIVVPGQEPESGRRSYNCC 203
+ TNI + +S ++ CC
Sbjct: 188 PQTGTNIALSNPTEDSAAKNGKCC 211
>gi|302771275|ref|XP_002969056.1| rab family GTPase [Selaginella moellendorffii]
gi|302822422|ref|XP_002992869.1| rab family GTPase [Selaginella moellendorffii]
gi|300139317|gb|EFJ06060.1| rab family GTPase [Selaginella moellendorffii]
gi|300163561|gb|EFJ30172.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 128/205 (62%), Positives = 160/205 (78%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF L+SK+TIGVEF T+T+ + K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKTIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITK+ +++NV RWL+ELR HAD NI+IMLVGNKSDL+ LR V
Sbjct: 77 ITSAYYRGAVGALLVYDITKQATYENVERWLKELRDHADSNIVIMLVGNKSDLKHLRGVA 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T+DA+ F+EKEGL F+ETSALE+TNVE AF ++LTEIYRIVSKKAL + D G
Sbjct: 137 TDDAQRFSEKEGLSFIETSALEATNVEKAFQSILTEIYRIVSKKALASEDPVLVGPGEG- 195
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
++ G E ++ + CC++
Sbjct: 196 ----KAIIVGPEQDANTKKKACCST 216
>gi|313231377|emb|CBY08492.1| unnamed protein product [Oikopleura dioica]
Length = 217
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 126/204 (61%), Positives = 158/204 (77%), Gaps = 3/204 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 15 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVEGKTIKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T+AYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 75 ITAAYYRGAVGALLVYDIAKHTTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA+ +AE++ L F+ETSAL+STNVE AF +LTEIY+IVS+K L +S+ GG
Sbjct: 135 TEDARNYAERQSLSFIETSALDSTNVETAFQNILTEIYKIVSQKQLG---DSDRGGDLPD 191
Query: 181 LKATNIVVPGQEPESGRRSYNCCT 204
+I VP P + R+ CC
Sbjct: 192 NDVVDIHVPDSTPGNQRKKSGCCN 215
>gi|408399192|gb|EKJ78316.1| hypothetical protein FPSE_01502 [Fusarium pseudograminearum CS3096]
Length = 212
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 126/203 (62%), Positives = 159/203 (78%), Gaps = 4/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK FA + L F+ETSAL+++NVELAF +LTEIYRIVS KAL + D ++ +++
Sbjct: 134 TEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDSAQ----ATI 189
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
TNI + + + CC
Sbjct: 190 GAGTNISLSKPADDDAAKGGKCC 212
>gi|356501105|ref|XP_003519369.1| PREDICTED: ras-related protein Rab2BV-like [Glycine max]
Length = 217
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 133/206 (64%), Positives = 159/206 (77%), Gaps = 6/206 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+TL + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITKRQ+FDNV RWL ELR HAD NI+IM+ GNKSDL LRAV
Sbjct: 77 ITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLNHLRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA+ AE+EGL F+ETSALE+ NV+ AF T+L +IY I+SKKAL A + + S G L
Sbjct: 137 TEDAQSLAEREGLSFLETSALEAYNVDKAFQTILFDIYHIISKKALAAQEATSSTG---L 193
Query: 181 LKATNIVVPGQEPES-GRRSYNCCTS 205
+ T I V + G RS CC++
Sbjct: 194 PQGTTINVSNMAGNAGGNRS--CCSN 217
>gi|223947393|gb|ACN27780.1| unknown [Zea mays]
Length = 216
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 131/205 (63%), Positives = 159/205 (77%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+ L I K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRNLQIDGKTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITK+QSFD+V RWL ELRGHAD NI++M+VGNKSDL LR+VP
Sbjct: 77 ITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRGHADANIVVMMVGNKSDLNHLRSVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
ED + F+EKEGL F+ETSALE+ NVE AF T+L+EI++ VSKKAL A + + G S
Sbjct: 137 EEDGRAFSEKEGLSFLETSALEAINVEKAFHTILSEIHQTVSKKALAAQASASTNGRS-- 194
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
++ T I V S +CC+S
Sbjct: 195 MQGTTINVA---ESSTVTKGSCCSS 216
>gi|358396186|gb|EHK45567.1| secretion-related small GTPase [Trichoderma atroviride IMI 206040]
Length = 212
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 126/203 (62%), Positives = 158/203 (77%), Gaps = 4/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK FA + L F+ETSAL+++NVELAF +LTEIYRIVS KAL + D G +++
Sbjct: 134 TDEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGD----GAQATI 189
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
TNI + + + CC
Sbjct: 190 GAGTNISLSKAADDEAAKGGKCC 212
>gi|388517625|gb|AFK46874.1| unknown [Lotus japonicus]
Length = 216
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 134/211 (63%), Positives = 156/211 (73%), Gaps = 17/211 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+TL + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITKRQ+FDNV RWL ELR HAD NI+IM+ GNKSDL LRAV
Sbjct: 77 ITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLNHLRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
+D AEK+GL F+ETSALE+TN+E AF T+LTEIY IVSKKAL A E+ +G S
Sbjct: 137 EDDGGALAEKDGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQ-EATAGAS--- 192
Query: 181 LKATNIVVPGQ------EPESGRRSYNCCTS 205
VPGQ SG CC++
Sbjct: 193 -------VPGQGTTINVADTSGNTKKGCCST 216
>gi|46116970|ref|XP_384503.1| hypothetical protein FG04327.1 [Gibberella zeae PH-1]
Length = 199
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 125/203 (61%), Positives = 159/203 (78%), Gaps = 4/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 1 MIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 60
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 61 ITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVP 120
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK FA + L F+ETSAL+++NVELAF +LTEIYRIVS KAL + D ++ +++
Sbjct: 121 TEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDSAQ----ATI 176
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
TNI + + + CC
Sbjct: 177 GAGTNISLSKPADDDAAKGGKCC 199
>gi|452986440|gb|EME86196.1| hypothetical protein MYCFIDRAFT_72266 [Pseudocercospora fijiensis
CIRAD86]
Length = 211
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 130/203 (64%), Positives = 157/203 (77%), Gaps = 5/203 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q+F NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDISKEQTFGNVQRWLKELRDHADTNIVIMLVGNKSDLRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T+DAK FA + GL F+ETSAL+++NVELAF LTEIYRIVS KAL D+ SG +
Sbjct: 134 TDDAKAFAAENGLSFIETSALDASNVELAFQQELTEIYRIVSSKAL---DQDTSGPAPG- 189
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ T+I + P + CC
Sbjct: 190 -QGTSIPLSASTPAGEAKKGQCC 211
>gi|3024501|sp|Q40193.1|RB11C_LOTJA RecName: Full=Ras-related protein Rab11C
gi|1370146|emb|CAA98179.1| RAB11C [Lotus japonicus]
Length = 216
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 134/211 (63%), Positives = 156/211 (73%), Gaps = 17/211 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+TL + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITKRQ+FDNV RWL ELR HAD NI+IM+ GNKSDL LRAV
Sbjct: 77 ITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLNHLRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
+D +EKEGL F+ETSALE+TN+E AF T+LTEIY IVSKKAL A E+ +G S
Sbjct: 137 EDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQ-EATAGAS--- 192
Query: 181 LKATNIVVPGQ------EPESGRRSYNCCTS 205
VPGQ SG CC++
Sbjct: 193 -------VPGQGTTINVADTSGNTKKGCCST 216
>gi|346320690|gb|EGX90290.1| Ras GTPase Rab11, putative [Cordyceps militaris CM01]
Length = 204
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 126/203 (62%), Positives = 158/203 (77%), Gaps = 4/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 6 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 65
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 66 ITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVP 125
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK FA + L F+ETSAL+++NVELAF +LTEIYRIVS KAL D ++ +++
Sbjct: 126 TEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDGGDSAQ----ATI 181
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
TNI + + + CC
Sbjct: 182 GAGTNISLSKPADDDASKGGKCC 204
>gi|358381001|gb|EHK18677.1| secretion-related small GTPase [Trichoderma virens Gv29-8]
Length = 212
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 126/203 (62%), Positives = 158/203 (77%), Gaps = 4/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK FA + L F+ETSAL+++NVELAF +LTEIYRIVS KAL + D G +++
Sbjct: 134 TDEAKGFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGD----GAQATI 189
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
TNI + + + CC
Sbjct: 190 GAGTNISLSKAADDEASKGGKCC 212
>gi|356542139|ref|XP_003539528.1| PREDICTED: ras-related protein Rab11C-like isoform 1 [Glycine max]
gi|356542141|ref|XP_003539529.1| PREDICTED: ras-related protein Rab11C-like isoform 2 [Glycine max]
Length = 216
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 131/211 (62%), Positives = 155/211 (73%), Gaps = 17/211 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+TL + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITKRQ+FDNV RWL ELR HAD NI+IM+ GNKSDL LRAV
Sbjct: 77 ITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLSHLRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
+D + AE+EGL F+ETSALE+TN+E AF T+LTEIY IVSKKAL A +
Sbjct: 137 EDDGQALAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQE---------- 186
Query: 181 LKATNIVVPGQEP------ESGRRSYNCCTS 205
A ++PGQ SG CC++
Sbjct: 187 -AAVGTILPGQGTTINVGDASGNTKRGCCSA 216
>gi|255566524|ref|XP_002524247.1| protein with unknown function [Ricinus communis]
gi|223536524|gb|EEF38171.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 131/205 (63%), Positives = 156/205 (76%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+TL + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITKRQ+FDNV RWL ELR HAD NI+IM+ GNKSDL LRAV
Sbjct: 77 ITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLNHLRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
EDA+ AEKEGL F+ETSALE+ N+E AF ++L +IY I+SKKAL A E+ S+ L
Sbjct: 137 AEDARMLAEKEGLSFLETSALEAHNIEKAFQSILLDIYHIISKKALAA---QEAANSTGL 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ T I V +R CCT+
Sbjct: 194 PQGTTINVANLSGNVNKRP--CCTN 216
>gi|145229443|ref|XP_001389030.1| Ras-related protein Rab-11A [Aspergillus niger CBS 513.88]
gi|134055135|emb|CAK37081.1| unnamed protein product [Aspergillus niger]
gi|350638153|gb|EHA26509.1| hypothetical protein ASPNIDRAFT_205975 [Aspergillus niger ATCC
1015]
gi|358366919|dbj|GAA83539.1| Ras GTPase Rab11 [Aspergillus kawachii IFO 4308]
Length = 211
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 128/203 (63%), Positives = 157/203 (77%), Gaps = 5/203 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q++DNV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK+FA + L F+ETSAL+++NVELAF +LTEIYRIVS KAL D + ++
Sbjct: 134 TEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDGGDAGQ-----TV 188
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
L +V E E + CC
Sbjct: 189 LGDRRDMVRIDESEDPKTKQGCC 211
>gi|259489417|tpe|CBF89672.1| TPA: Ras GTPase similar to RAB11B (Eurofung) [Aspergillus nidulans
FGSC A4]
Length = 210
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 126/178 (70%), Positives = 151/178 (84%), Gaps = 4/178 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS GKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGTGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q++DNV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSS 178
TE+AK+FA + L F+ETSAL+++NVELAF +LTEIYRIVS KAL E ESGG+S
Sbjct: 134 TEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKAL----EGESGGAS 187
>gi|55925277|ref|NP_001007360.1| ras-related protein Rab-11A [Danio rerio]
gi|55250361|gb|AAH85585.1| RAB11a, member RAS oncogene family [Danio rerio]
gi|126541086|emb|CAM46852.1| novel protein similar to vertebrate Ras family [Danio rerio]
gi|182891330|gb|AAI64310.1| Rab11a protein [Danio rerio]
Length = 215
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 159/205 (77%), Gaps = 6/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAEK GL F+ETSAL+STNVE AF T+LTEIYRIVS+K ++ +++ S+
Sbjct: 136 TDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQMSDRRDNDMSPSN-- 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
N+V +P + CC S
Sbjct: 194 ----NVVSIQVQPTENKPKMQCCQS 214
>gi|255558942|ref|XP_002520494.1| protein with unknown function [Ricinus communis]
gi|223540336|gb|EEF41907.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 133/211 (63%), Positives = 158/211 (74%), Gaps = 17/211 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+TL + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITKRQ+FDNV RWL ELR HAD NI+I++ GNKSDL LRAV
Sbjct: 77 ITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVILMAGNKSDLNHLRAVA 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
ED + AE+E L F+ETSALE+TNVE AF T+LTEIY I+SKKAL A E+ G+S+L
Sbjct: 137 EEDGQALAERESLSFLETSALEATNVEKAFQTILTEIYHIISKKALAAQ---EAAGNSTL 193
Query: 181 LKATNIVVPGQ------EPESGRRSYNCCTS 205
PGQ SG +CC++
Sbjct: 194 --------PGQGTTINVADTSGNTKRSCCST 216
>gi|407917911|gb|EKG11211.1| Ras GTPase [Macrophomina phaseolina MS6]
Length = 212
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 129/205 (62%), Positives = 162/205 (79%), Gaps = 8/205 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESES--GGSS 178
TE+AK+FA + L F+ETSAL+++NVELAF +LTEIYRIVS+KAL + +++ GG
Sbjct: 134 TEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALDQGESAQNPIGGER 193
Query: 179 SLLKATNIVVPGQEPESGRRSYNCC 203
L+ TN E + G+ CC
Sbjct: 194 RTLEITN--SADTEAKQGK----CC 212
>gi|449471775|ref|XP_002198100.2| PREDICTED: ras-related protein Rab-11A [Taeniopygia guttata]
Length = 258
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 159/205 (77%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 58 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 117
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 118 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 177
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAEK GL F+ETSAL+STNVE AF T+LTEIYRIVS+K ++ E++
Sbjct: 178 TDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRREND------- 230
Query: 181 LKATNIVVPGQEPES--GRRSYNCC 203
+ +N VVP P + + CC
Sbjct: 231 MSPSNNVVPIHVPPTTENKPKMQCC 255
>gi|148910011|gb|ABR18090.1| unknown [Picea sitchensis]
Length = 213
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 131/204 (64%), Positives = 160/204 (78%), Gaps = 7/204 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF L+SK+TIGVEF T+T+ + K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTVQVEGKTIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITK +F+NV RWL+ELR HAD NI+IMLVGNKSDL+ LR V
Sbjct: 77 ITSAYYRGAVGALLVYDITKPTTFENVGRWLKELRDHADSNIVIMLVGNKSDLKHLRGVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA+ FAEKEGL F+ETSALE+TNVE AF T+L EI+RI+SKKAL SE + +
Sbjct: 137 TEDAQSFAEKEGLSFLETSALEATNVERAFQTILAEIHRIISKKALA----SEEAAGAGI 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCT 204
+ IVV +P++ + CC+
Sbjct: 193 KEGKTIVVA--DPDTNTKK-ACCS 213
>gi|320594196|gb|EFX06599.1| Ras GTPase [Grosmannia clavigera kw1407]
Length = 211
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 128/203 (63%), Positives = 160/203 (78%), Gaps = 5/203 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK FA + L F+ETSAL+++NVELAF +LTEIYRIVS KAL + D G +++
Sbjct: 134 TEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGD----GAQATI 189
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
TNI + ++ +S CC
Sbjct: 190 GAGTNISLSKPAEDATAKS-GCC 211
>gi|326489368|dbj|BAK01667.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531904|dbj|BAK01328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 215
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 129/205 (62%), Positives = 158/205 (77%), Gaps = 6/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+TL I K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITK+Q+F+N+ RWL ELR HAD NI+IM+VGNKSDL LR+VP
Sbjct: 77 ITSAYYRGAVGALLVYDITKKQTFENINRWLRELRDHADSNIVIMMVGNKSDLNHLRSVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
ED + AEKEGL F+ETSALE+ NVE AF T+L++I++I+SKKAL A E+ GS
Sbjct: 137 EEDGQALAEKEGLSFLETSALEALNVEKAFQTILSDIHQIISKKALAAQ---EAAGSGPP 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ T I V SG CC++
Sbjct: 194 TQGTTINVA---DSSGNTKKGCCST 215
>gi|3024528|sp|Q39434.1|RB2BV_BETVU RecName: Full=Ras-related protein Rab2BV
gi|974778|emb|CAA89049.1| small G protein [Beta vulgaris subsp. vulgaris]
Length = 214
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 131/205 (63%), Positives = 156/205 (76%), Gaps = 7/205 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+TL + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITKRQ+FDNV RWL ELR HAD NI+IM+ GNKSDL+ LRAV
Sbjct: 77 ITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLKHLRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
ED + AEKEGL F+ETSALE+ N+E AF T+LTEIY I+SKKAL A + SS+L
Sbjct: 137 EEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKALAAQE-----ASSNL 191
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ + RRS CC++
Sbjct: 192 PGQGTTINVADASANQRRS--CCST 214
>gi|303746|dbj|BAA02114.1| GTP-binding protein [Pisum sativum]
gi|738938|prf||2001457F GTP-binding protein
Length = 218
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 129/205 (62%), Positives = 160/205 (78%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF TK+L I K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDSKVIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+R +F+N ARWL+ELR H D NI++ML+GNKSDL L AVP
Sbjct: 78 ITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED K FAE+E L FMETSALE+TNVE AF VL++IY IVSKKA+ A + GSSS
Sbjct: 138 TEDGKSFAERESLYFMETSALEATNVENAFSEVLSQIYHIVSKKAVEAGE----SGSSSA 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ + + +E S + + CC++
Sbjct: 194 VPSIGQTINVKEDSSVFKRFGCCSN 218
>gi|345309353|ref|XP_001518037.2| PREDICTED: ras-related protein Rab-11A-like [Ornithorhynchus
anatinus]
Length = 376
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 159/205 (77%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 176 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 235
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 236 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 295
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAEK GL F+ETSAL+STNVE AF T+LTEIYRIVS+K ++ E++
Sbjct: 296 TDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRREND------- 348
Query: 181 LKATNIVVPGQEPES--GRRSYNCC 203
+ +N VVP P + + CC
Sbjct: 349 MSPSNNVVPIHVPPTTENKPKVQCC 373
>gi|326521104|dbj|BAJ96755.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 134/205 (65%), Positives = 165/205 (80%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+TL I K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LV+DITKRQ+FDNV RWL ELR HAD NI++M+VGNKSDL LR+VP
Sbjct: 77 ITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVVMMVGNKSDLNHLRSVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
ED++ F+EKEGL F+ETSALE+ NVE AF TVL+EI++IVSKKAL A + + + G S
Sbjct: 137 EEDSQAFSEKEGLSFLETSALEAINVEKAFHTVLSEIHQIVSKKALAAQESAAANGRS-- 194
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
++ T I V EP + + +CC+S
Sbjct: 195 MQGTTINVA--EPSTNAKG-SCCSS 216
>gi|356538966|ref|XP_003537971.1| PREDICTED: ras-related protein Rab11C-like [Glycine max]
Length = 216
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 131/211 (62%), Positives = 154/211 (72%), Gaps = 17/211 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+TL + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITKRQ+FDNV RWL ELR HAD NI+IM+ GNKSDL LRAV
Sbjct: 77 ITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLSHLRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
+D + AE+EGL F+ETSALE+TN+E AF T+LTEIY IVSKKAL A +
Sbjct: 137 EDDGQALAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQE---------- 186
Query: 181 LKATNIVVPGQEP------ESGRRSYNCCTS 205
A +PGQ SG CC++
Sbjct: 187 -AAVGTTLPGQGTTINVGDASGNTKRGCCST 216
>gi|19920111|gb|AAM08543.1|AC079935_15 Putative Ras-related protein Rab [Oryza sativa Japonica Group]
Length = 202
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 135/205 (65%), Positives = 160/205 (78%), Gaps = 18/205 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKSQ+LARFAR+EFS+DSKATIGVEFQT+TL+I HK YRA
Sbjct: 15 LIGDSAVGKSQILARFARNEFSIDSKATIGVEFQTRTLLIDHK--------------YRA 60
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA+GA+LVYDITKRQSFD++ RWLEELRGHADKNI+IMLVGNKSDLE RAV
Sbjct: 61 VTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNKSDLEDERAVS 120
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAKEFAEKE L F+ETSAL++TNVE AF TVL+EI++I SKK + A + ++ G++
Sbjct: 121 TEDAKEFAEKENLFFLETSALQATNVENAFQTVLSEIFKIHSKKNMAA--DPKANGAAPS 178
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
L +VVPG E + CC+S
Sbjct: 179 LAGKKVVVPGPAQEIPKS--KCCSS 201
>gi|310798039|gb|EFQ32932.1| Ras family protein [Glomerella graminicola M1.001]
Length = 212
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 127/203 (62%), Positives = 158/203 (77%), Gaps = 4/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK FA + L F+ETSAL+++NVELAF +LTEIYRIVS KAL + D G +++
Sbjct: 134 TEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGD----GPQATI 189
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
I + +S +S CC
Sbjct: 190 GAGPGISLTKPADDSAEKSGKCC 212
>gi|326926865|ref|XP_003209617.1| PREDICTED: ras-related protein Rab-11A-like [Meleagris gallopavo]
Length = 217
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 159/205 (77%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 77 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAEK GL F+ETSAL+STNVE AF T+LTEIYRIVS+K ++ E++
Sbjct: 137 TDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRREND------- 189
Query: 181 LKATNIVVPGQEPES--GRRSYNCC 203
+ +N VVP P + + CC
Sbjct: 190 MSPSNNVVPIHVPPTTENKPKMQCC 214
>gi|398408387|ref|XP_003855659.1| GTP-binding protein [Zymoseptoria tritici IPO323]
gi|339475543|gb|EGP90635.1| GTP-binding protein [Zymoseptoria tritici IPO323]
Length = 211
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 127/203 (62%), Positives = 160/203 (78%), Gaps = 5/203 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + +K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K+Q+++NV RWL+ELR HAD NI+IMLVGNKSDL LRAV
Sbjct: 74 ITSAYYRGAVGALLVYDISKQQTYENVTRWLKELRDHADTNIVIMLVGNKSDLRHLRAVS 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T+DAK+FA + GL F+ETSAL+++NVELAF L EIYRIVS KAL + S+ G S
Sbjct: 134 TDDAKQFASENGLSFIETSALDASNVELAFQQELAEIYRIVSSKALDQGEPSQGPGQGSA 193
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ + P P + ++S CC
Sbjct: 194 IP----LGPSNMP-ADKKSGQCC 211
>gi|449489778|ref|XP_002187627.2| PREDICTED: ras-related protein Rab-11A-like [Taeniopygia guttata]
Length = 232
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 129/203 (63%), Positives = 163/203 (80%), Gaps = 5/203 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + +K VKAQIWDTAGQERYRA
Sbjct: 32 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQERYRA 91
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++N RWL+EL+ HAD NI+IMLVGNKSDL LRAVP
Sbjct: 92 ITSAYYRGAVGALLVYDIAKYLTYENAERWLKELQDHADANIVIMLVGNKSDLRHLRAVP 151
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAEK GL F+ETSAL+STNVE AF +L+EIYRIVS++ +T ESE G SS++
Sbjct: 152 TDEARSFAEKNGLSFLETSALDSTNVETAFHNILSEIYRIVSQRQITGQAESEFGPSSTI 211
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
V+P Q + GR++ CC
Sbjct: 212 EPIQ--VLPTQ--QEGRQA-PCC 229
>gi|396477566|ref|XP_003840300.1| similar to ras-related protein Rab-11B [Leptosphaeria maculans JN3]
gi|312216872|emb|CBX96821.1| similar to ras-related protein Rab-11B [Leptosphaeria maculans JN3]
Length = 211
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 128/203 (63%), Positives = 159/203 (78%), Gaps = 5/203 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK+FA + L F+ETSAL+++NVELAF +LTEIYRIVS KAL D+ E GS ++
Sbjct: 134 TEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKAL---DQGE--GSQNV 188
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
L V+ + + CC
Sbjct: 189 LGGERKVLEISKSADAEQKKGCC 211
>gi|194387154|dbj|BAG59943.1| unnamed protein product [Homo sapiens]
Length = 261
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 128/205 (62%), Positives = 159/205 (77%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 61 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 120
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 121 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 180
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAEK GL F+ETSAL+STNVE AF T+LTEIYRIVS+K ++ E+++ S
Sbjct: 181 TDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDTSPS--- 237
Query: 181 LKATNIVVPGQEPES--GRRSYNCC 203
N VVP P + + CC
Sbjct: 238 ----NNVVPIHVPPTTENKPKVQCC 258
>gi|440902572|gb|ELR53352.1| Ras-related protein Rab-11A, partial [Bos grunniens mutus]
Length = 258
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 159/205 (77%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 58 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 117
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 118 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 177
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAEK GL F+ETSAL+STNVE AF T+LTEIYRIVS+K ++ E++
Sbjct: 178 TDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRREND------- 230
Query: 181 LKATNIVVPGQEPES--GRRSYNCC 203
+ +N VVP P + + CC
Sbjct: 231 MSPSNNVVPIHVPPTTENKPKVQCC 255
>gi|119182491|ref|XP_001242374.1| hypothetical protein CIMG_06270 [Coccidioides immitis RS]
Length = 227
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 126/203 (62%), Positives = 160/203 (78%), Gaps = 6/203 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +K+QIWDTAGQERYRA
Sbjct: 31 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDTAGQERYRA 90
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 91 ITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 150
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK+FA L F+ETSAL+++NVELAF +LTEI+RIVS KAL + D +++ S
Sbjct: 151 TEEAKQFASDNNLSFIETSALDASNVELAFQNILTEIFRIVSSKALDSGDSAQNPLSD-- 208
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ + Q+PES + CC
Sbjct: 209 -RKVVEITKTQDPESKQ---GCC 227
>gi|294463532|gb|ADE77295.1| unknown [Picea sitchensis]
Length = 214
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 133/203 (65%), Positives = 161/203 (79%), Gaps = 6/203 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF L+SK+TIGVEF T+T+ + K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKTIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITK +FDNV RWL ELR HAD NI+IMLVGNKSDL +RAVP
Sbjct: 77 ITSAYYRGAVGALLVYDITKNATFDNVKRWLRELRDHADSNIVIMLVGNKSDLSHMRAVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
+DA++FAEKEGL FMETSALESTNVE +F ++LTEIY+IV +K+L A + + +G S
Sbjct: 137 IDDAQDFAEKEGLSFMETSALESTNVEKSFQSILTEIYQIVKRKSLAAEEAASAGPS--- 193
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ T I V E + +RS CC
Sbjct: 194 -QGTPINVSDAETIAKKRS--CC 213
>gi|70990240|ref|XP_749969.1| Ras GTPase Rab11 [Aspergillus fumigatus Af293]
gi|66847601|gb|EAL87931.1| Ras GTPase Rab11, putative [Aspergillus fumigatus Af293]
gi|159130449|gb|EDP55562.1| Ras GTPase Rab11, putative [Aspergillus fumigatus A1163]
Length = 204
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 130/207 (62%), Positives = 159/207 (76%), Gaps = 14/207 (6%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 8 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 67
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q++DNV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 68 ITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 127
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESE----SGG 176
T++AK+FA + L F+ETSAL+++NVELAF +LTEIYRIVS KAL D + SG
Sbjct: 128 TDEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDNGDSGQAPLSSGR 187
Query: 177 SSSLLKATNIVVPGQEPESGRRSYNCC 203
+ + KA P E + G CC
Sbjct: 188 TIEVSKA-----PDTESKQG-----CC 204
>gi|449266278|gb|EMC77353.1| Ras-related protein Rab-11A, partial [Columba livia]
Length = 203
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 159/205 (77%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 3 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 62
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 63 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 122
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAEK GL F+ETSAL+STNVE AF T+LTEIYRIVS+K ++ E++
Sbjct: 123 TDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRREND------- 175
Query: 181 LKATNIVVPGQEPES--GRRSYNCC 203
+ +N VVP P + + CC
Sbjct: 176 MSPSNNVVPIHVPPTTENKPKMQCC 200
>gi|119497347|ref|XP_001265432.1| Ras GTPase Rab11, putative [Neosartorya fischeri NRRL 181]
gi|119413594|gb|EAW23535.1| Ras GTPase Rab11, putative [Neosartorya fischeri NRRL 181]
Length = 224
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 130/206 (63%), Positives = 157/206 (76%), Gaps = 12/206 (5%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 28 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 87
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q++DNV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 88 ITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 147
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK+FA + L F+ETSAL+++NVELAF +LTEIYRIVS KAL D G + L
Sbjct: 148 TDEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDNGD----SGQAPL 203
Query: 181 LKATNIVV---PGQEPESGRRSYNCC 203
I V P E + G CC
Sbjct: 204 SSGRTIEVSKAPDTESKQG-----CC 224
>gi|303319221|ref|XP_003069610.1| Ras-related protein Rab-11B , putative [Coccidioides posadasii C735
delta SOWgp]
gi|240109296|gb|EER27465.1| Ras-related protein Rab-11B , putative [Coccidioides posadasii C735
delta SOWgp]
gi|320040974|gb|EFW22907.1| ras GTPase Rab11 [Coccidioides posadasii str. Silveira]
gi|392865267|gb|EAS31048.2| small GTP-binding protein [Coccidioides immitis RS]
Length = 210
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 126/203 (62%), Positives = 160/203 (78%), Gaps = 6/203 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +K+QIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK+FA L F+ETSAL+++NVELAF +LTEI+RIVS KAL + D +++ S
Sbjct: 134 TEEAKQFASDNNLSFIETSALDASNVELAFQNILTEIFRIVSSKALDSGDSAQNPLSD-- 191
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ + Q+PES + CC
Sbjct: 192 -RKVVEITKTQDPESKQ---GCC 210
>gi|258589865|gb|ACV82919.1| RabA2 [Phaseolus vulgaris]
Length = 216
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 133/211 (63%), Positives = 157/211 (74%), Gaps = 17/211 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+TL + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITKRQ+FDNV RWL ELR HAD NI+IM+ GNKSDL LRAV
Sbjct: 77 ITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLSHLRAVY 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
+D + AE+EGL F+ETSALE+TN+E AF T+LTEIY IVSKKAL A E+G ++L
Sbjct: 137 EDDGQNLAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQ---EAGVGTTL 193
Query: 181 LKATNIVVPGQEP------ESGRRSYNCCTS 205
PGQ SG CC++
Sbjct: 194 --------PGQGTTINVGDASGNTKRGCCST 216
>gi|417409144|gb|JAA51094.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 261
Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 159/205 (77%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 61 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 120
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 121 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 180
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAEK GL F+ETSAL+STNVE AF T+LTEIYRIVS+K ++ E++
Sbjct: 181 TDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRREND------- 233
Query: 181 LKATNIVVPGQEPES--GRRSYNCC 203
+ +N VVP P + + CC
Sbjct: 234 MSPSNNVVPIHVPPTTENKPKVQCC 258
>gi|334314719|ref|XP_003340079.1| PREDICTED: ras-related protein Rab-11A-like isoform 2 [Monodelphis
domestica]
Length = 205
Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 159/205 (77%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 5 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 64
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 65 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 124
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAEK GL F+ETSAL+STNVE AF T+LTEIYRIVS+K ++ E++
Sbjct: 125 TDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRREND------- 177
Query: 181 LKATNIVVPGQEPES--GRRSYNCC 203
+ +N VVP P + + CC
Sbjct: 178 MSPSNNVVPIHVPPTTENKPKVQCC 202
>gi|338717415|ref|XP_001496560.3| PREDICTED: ras-related protein Rab-11A-like [Equus caballus]
Length = 346
Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 159/205 (77%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 146 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 205
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 206 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 265
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAEK GL F+ETSAL+STNVE AF T+LTEIYRIVS+K ++ E++
Sbjct: 266 TDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRREND------- 318
Query: 181 LKATNIVVPGQEPES--GRRSYNCC 203
+ +N VVP P + + CC
Sbjct: 319 MSPSNNVVPIHVPPTTENKPKVQCC 343
>gi|281347336|gb|EFB22920.1| hypothetical protein PANDA_002189 [Ailuropoda melanoleuca]
Length = 205
Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 159/205 (77%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 5 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 64
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 65 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 124
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAEK GL F+ETSAL+STNVE AF T+LTEIYRIVS+K ++ E++
Sbjct: 125 TDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRREND------- 177
Query: 181 LKATNIVVPGQEPES--GRRSYNCC 203
+ +N VVP P + + CC
Sbjct: 178 MSPSNNVVPIHVPPTTENKPKVQCC 202
>gi|449441350|ref|XP_004138445.1| PREDICTED: ras-related protein Rab2BV-like [Cucumis sativus]
gi|449528641|ref|XP_004171312.1| PREDICTED: ras-related protein Rab2BV-like [Cucumis sativus]
Length = 216
Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 131/205 (63%), Positives = 156/205 (76%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+TL + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITKRQ+FDNV RWL ELR HAD NI+IM+ GNK+DL LRAV
Sbjct: 77 ITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKADLNHLRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
EDA+ AEKEGL F+ETSALE+ NVE AF T+L +IY I+SKKAL A + + + G L
Sbjct: 137 AEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEATSNPG---L 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
T I V +RS CC++
Sbjct: 194 PHGTTINVANISGNYNKRS--CCSN 216
>gi|297849266|ref|XP_002892514.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
gi|297338356|gb|EFH68773.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 262 bits (670), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 125/206 (60%), Positives = 166/206 (80%), Gaps = 5/206 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF L+SK+TIGVEF T+TL + + VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGA+GA+LVYD+TK +F+NV+RWL+ELR HAD NI+IML+GNK+DL+ LRAV
Sbjct: 77 ITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVA 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA+ +AEKEGL F+ETSALE+ NVE AF T+L+EIYRI+SKK+++++ ++ ++S+
Sbjct: 137 TEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEIYRIISKKSISSD---QTTANASI 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
+ I V + ++ CC+SS
Sbjct: 194 KEGQTIDVAATSESTAKKP--CCSSS 217
>gi|387914788|gb|AFK11003.1| ras-related protein Rab-11A isoform 1 [Callorhinchus milii]
Length = 216
Score = 262 bits (670), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 128/205 (62%), Positives = 158/205 (77%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTTKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK FAEK GL F+ETSAL+STNVE AF T+LTEIYRIVS+K ++ E++
Sbjct: 136 TDEAKAFAEKNGLSFIETSALDSTNVETAFQTILTEIYRIVSQKQMSDRREND------- 188
Query: 181 LKATNIVVPGQEPES--GRRSYNCC 203
+ +N VVP P + + CC
Sbjct: 189 MSPSNNVVPIHVPPTTENKPKMQCC 213
>gi|198434696|ref|XP_002131435.1| PREDICTED: similar to Ras-related protein Rab-11B (ORA3) [Ciona
intestinalis]
Length = 217
Score = 262 bits (670), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 161/205 (78%), Gaps = 8/205 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ ++ K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVNGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL--TANDESESGGSS 178
T++AK F+EK GL F+ETSAL+STNVE+AF +LTEIY IVS+K + + NDE G
Sbjct: 136 TDEAKAFSEKNGLSFIETSALDSTNVEVAFQNILTEIYLIVSQKQINDSNNDEEVKDG-- 193
Query: 179 SLLKATNIVVPGQEPESGRRSYNCC 203
+ +IV+ P+ ++S CC
Sbjct: 194 ---QPVDIVISSTNPQPNKQS-QCC 214
>gi|218194009|gb|EEC76436.1| hypothetical protein OsI_14124 [Oryza sativa Indica Group]
Length = 215
Score = 262 bits (669), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 129/205 (62%), Positives = 157/205 (76%), Gaps = 6/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+TL I K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITK+Q+F+N+ RWL ELR HAD NI+IM+VGNKSDL LR+VP
Sbjct: 77 ITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIMMVGNKSDLNHLRSVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
ED + AEKEGL F+ETSALE+ NVE AF T+L +I++I+SKKAL A E+ GS
Sbjct: 137 EEDGQALAEKEGLSFLETSALEALNVEKAFQTILKDIHQIISKKALAAQ---EAAGSGPP 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ T I V + R CC+S
Sbjct: 194 TQGTTINVTDSAVNTKR---GCCSS 215
>gi|224129448|ref|XP_002328719.1| predicted protein [Populus trichocarpa]
gi|118484335|gb|ABK94045.1| unknown [Populus trichocarpa]
gi|222839017|gb|EEE77368.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 262 bits (669), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 132/206 (64%), Positives = 168/206 (81%), Gaps = 7/206 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF L+SK+TIGVEF T+TL + + VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGA+GA+LVYD+TK +F+NV+RWL+ELR HAD NI+IML+GNK+DL+ LRAV
Sbjct: 77 ITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVA 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA+ +AEKEGL F+ETSALE+TNVE AF T+L+EIYRIVSKK+L++ + + +S+
Sbjct: 137 TEDAQSYAEKEGLAFIETSALEATNVEKAFQTILSEIYRIVSKKSLSSEESA----PASI 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
IVV G EP++ + CC+SS
Sbjct: 193 KDGKTIVVGGPEPDTKK---TCCSSS 215
>gi|57524801|ref|NP_001005827.1| ras-related protein Rab-11A [Gallus gallus]
gi|82233797|sp|Q5ZJN2.1|RB11A_CHICK RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|53133464|emb|CAG32061.1| hypothetical protein RCJMB04_16p4 [Gallus gallus]
Length = 216
Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 159/205 (77%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAEK GL F+ETSAL+STNVE AF T+LTEIYRIVS+K ++ E++
Sbjct: 136 TDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRREND------- 188
Query: 181 LKATNIVVPGQEPES--GRRSYNCC 203
+ +N VVP P + + CC
Sbjct: 189 MSPSNNVVPIHVPPTTENKPKMQCC 213
>gi|212275882|ref|NP_001130075.1| uncharacterized protein LOC100191168 [Zea mays]
gi|194688226|gb|ACF78197.1| unknown [Zea mays]
gi|195643758|gb|ACG41347.1| ras-related protein Rab11A [Zea mays]
gi|413932580|gb|AFW67131.1| Ras protein Rab11A [Zea mays]
Length = 215
Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 130/205 (63%), Positives = 157/205 (76%), Gaps = 6/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+TL I K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITK+Q+F+N+ RWL ELR HAD NI+IM+VGNKSDL LR+VP
Sbjct: 77 ITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIMMVGNKSDLNHLRSVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
ED + AEKEGL F+ETSALE+ NVE AF TVL++I++I+SKKAL A E+ GS
Sbjct: 137 EEDGQALAEKEGLSFLETSALEALNVEKAFQTVLSDIHQIISKKALAAQ---EAAGSGPP 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ T I V S CC+S
Sbjct: 194 GQGTTINVA---DSSANMKGGCCSS 215
>gi|387017926|gb|AFJ51081.1| ras-related protein Rab-11A [Crotalus adamanteus]
Length = 217
Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 159/205 (77%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 77 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAEK GL F+ETSAL+STNVE AF T+LTEIYRIVS+K ++ E++
Sbjct: 137 TDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRREND------- 189
Query: 181 LKATNIVVPGQEPES--GRRSYNCC 203
+ +N VVP P + + CC
Sbjct: 190 MSPSNNVVPIHVPPTTENKPKMQCC 214
>gi|255950668|ref|XP_002566101.1| Pc22g22060 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593118|emb|CAP99494.1| Pc22g22060 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 209
Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 127/203 (62%), Positives = 159/203 (78%), Gaps = 7/203 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDISKHQTYENVNRWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK+FA + L F+ETSAL+++NVELAF +LTEIYRIVS KAL D E G +
Sbjct: 134 TEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKAL---DNGE--GGQQV 188
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
L ++ P ++ ++ CC
Sbjct: 189 LDRRPVIDPSKQDSEQKQG--CC 209
>gi|189194986|ref|XP_001933831.1| GTP-binding protein yptV1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187979710|gb|EDU46336.1| GTP-binding protein yptV1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|451995174|gb|EMD87643.1| hypothetical protein COCHEDRAFT_1159917 [Cochliobolus
heterostrophus C5]
Length = 208
Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 128/203 (63%), Positives = 158/203 (77%), Gaps = 5/203 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 11 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDTAGQERYRA 70
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 71 ITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 130
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK+FA + L F+ETSAL+++NVELAF +LTEIYRIVS KAL D+ E GS +
Sbjct: 131 TEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKAL---DQGE--GSGPV 185
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
L V+ + + CC
Sbjct: 186 LGNDRKVLEISKSADAEQKKGCC 208
>gi|159906379|gb|ABX10878.1| RAB11B [Anas platyrhynchos]
Length = 216
Score = 261 bits (668), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 159/205 (77%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAEK GL F+ETSAL+STNVE AF T+LTEIYRIVS+K ++ E++
Sbjct: 136 TDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRREND------- 188
Query: 181 LKATNIVVPGQEPES--GRRSYNCC 203
+ +N VVP P + + CC
Sbjct: 189 MSPSNNVVPIHVPPTTGNKPKMQCC 213
>gi|30584069|gb|AAP36283.1| Homo sapiens RAB11A, member RAS oncogene family [synthetic
construct]
gi|54697166|gb|AAV38955.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|54697172|gb|AAV38958.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|60653915|gb|AAX29650.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61365501|gb|AAX42718.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61365507|gb|AAX42719.1| RAB11A member RAS oncogene family [synthetic construct]
Length = 217
Score = 261 bits (668), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 159/205 (77%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAEK GL F+ETSAL+STNVE AF T+LTEIYRIVS+K ++ E++
Sbjct: 136 TDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRREND------- 188
Query: 181 LKATNIVVPGQEPES--GRRSYNCC 203
+ +N VVP P + + CC
Sbjct: 189 MSPSNNVVPIHVPPTTENKPKVQCC 213
>gi|226502406|ref|NP_001146923.1| LOC100280532 [Zea mays]
gi|195605270|gb|ACG24465.1| ras-related protein Rab11C [Zea mays]
Length = 216
Score = 261 bits (668), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 130/205 (63%), Positives = 158/205 (77%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS + +RF R+EF L+SK+TIGVEF T+ L I K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNIPSRFTRNEFCLESKSTIGVEFATRNLQIDGKTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITK+QSFD+V RWL ELRGHAD NI++M+VGNKSDL LR+VP
Sbjct: 77 ITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRGHADANIVVMMVGNKSDLNHLRSVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
ED + F+EKEGL F+ETSALE+ NVE AF T+L+EI++ VSKKAL A + + G S
Sbjct: 137 EEDGRAFSEKEGLSFLETSALEAINVEKAFHTILSEIHQTVSKKALAAQASASTNGRS-- 194
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
++ T I V S +CC+S
Sbjct: 195 MQGTTINVA---ESSTVTKGSCCSS 216
>gi|4758984|ref|NP_004654.1| ras-related protein Rab-11A isoform 1 [Homo sapiens]
gi|13592148|ref|NP_112414.1| ras-related protein Rab-11A [Rattus norvegicus]
gi|31980840|ref|NP_059078.2| ras-related protein Rab-11A [Mus musculus]
gi|54792725|ref|NP_001003276.1| ras-related protein Rab-11A [Canis lupus familiaris]
gi|72535192|ref|NP_001026958.1| ras-related protein Rab-11A [Sus scrofa]
gi|126722661|ref|NP_001075720.1| ras-related protein Rab-11A [Oryctolagus cuniculus]
gi|197102306|ref|NP_001127429.1| ras-related protein Rab-11A [Pongo abelii]
gi|387763102|ref|NP_001248718.1| ras-related protein Rab-11A [Macaca mulatta]
gi|114657631|ref|XP_510490.2| PREDICTED: uncharacterized protein LOC453523 isoform 2 [Pan
troglodytes]
gi|126277069|ref|XP_001367185.1| PREDICTED: ras-related protein Rab-11A-like isoform 1 [Monodelphis
domestica]
gi|296213515|ref|XP_002753302.1| PREDICTED: ras-related protein Rab-11A [Callithrix jacchus]
gi|301756939|ref|XP_002914304.1| PREDICTED: ras-related protein Rab-11A-like [Ailuropoda
melanoleuca]
gi|332235938|ref|XP_003267162.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Nomascus
leucogenys]
gi|344293421|ref|XP_003418421.1| PREDICTED: ras-related protein Rab-11A-like [Loxodonta africana]
gi|348555429|ref|XP_003463526.1| PREDICTED: ras-related protein Rab-11A-like [Cavia porcellus]
gi|354493388|ref|XP_003508824.1| PREDICTED: ras-related protein Rab-11A-like [Cricetulus griseus]
gi|395822367|ref|XP_003784490.1| PREDICTED: ras-related protein Rab-11A [Otolemur garnettii]
gi|397515596|ref|XP_003828035.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Pan paniscus]
gi|402874623|ref|XP_003901132.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Papio anubis]
gi|403300395|ref|XP_003940926.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Saimiri
boliviensis boliviensis]
gi|410960994|ref|XP_003987071.1| PREDICTED: ras-related protein Rab-11A [Felis catus]
gi|426232574|ref|XP_004010297.1| PREDICTED: ras-related protein Rab-11A [Ovis aries]
gi|426379447|ref|XP_004056409.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Gorilla gorilla
gorilla]
gi|50402540|sp|P62494.3|RB11A_RAT RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; AltName:
Full=24KG; Flags: Precursor
gi|50402541|sp|P62490.3|RB11A_CANFA RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|50402542|sp|P62491.3|RB11A_HUMAN RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; AltName:
Full=YL8; Flags: Precursor
gi|50402543|sp|P62492.3|RB11A_MOUSE RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|50402544|sp|P62493.3|RB11A_RABIT RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|75056558|sp|Q52NJ1.3|RB11A_PIG RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|75070685|sp|Q5R9M7.3|RB11A_PONAB RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|20379068|gb|AAM21094.1|AF498946_1 small GTP binding protein RAB11A [Homo sapiens]
gi|917|emb|CAA39799.1| rab11 [Canis lupus familiaris]
gi|35889|emb|CAA37300.1| unnamed protein product [Homo sapiens]
gi|206567|gb|AAA42012.1| ras p21-like small GTP-binding protein [Rattus norvegicus]
gi|310067|gb|AAA31491.1| tubulovesicle-associated protein [Oryctolagus cuniculus]
gi|505541|emb|CAA40064.1| H rab11 small GTP binding protein [Homo sapiens]
gi|2149975|gb|AAC32887.1| rab11a [Homo sapiens]
gi|12852002|dbj|BAB29233.1| unnamed protein product [Mus musculus]
gi|14715109|gb|AAH10722.1| RAB11a, member RAS oncogene family [Mus musculus]
gi|15426487|gb|AAH13348.1| RAB11A protein [Homo sapiens]
gi|47115275|emb|CAG28597.1| RAB11A [Homo sapiens]
gi|49168474|emb|CAG38732.1| RAB11A [Homo sapiens]
gi|54697162|gb|AAV38953.1| RAB11A, member RAS oncogene family [Homo sapiens]
gi|54697168|gb|AAV38956.1| RAB11A, member RAS oncogene family [Homo sapiens]
gi|55249677|gb|AAH85727.1| RAB11a, member RAS oncogene family [Rattus norvegicus]
gi|55729608|emb|CAH91533.1| hypothetical protein [Pongo abelii]
gi|61355506|gb|AAX41147.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61355514|gb|AAX41148.1| RAB11A member RAS oncogene family [synthetic construct]
gi|62868644|gb|AAY17510.1| Ras-related protein Rab-11A [Sus scrofa]
gi|74151140|dbj|BAE27693.1| unnamed protein product [Mus musculus]
gi|74204974|dbj|BAE20971.1| unnamed protein product [Mus musculus]
gi|74205093|dbj|BAE21003.1| unnamed protein product [Mus musculus]
gi|112292979|dbj|BAF02867.1| Rab11A [Mus musculus]
gi|119598158|gb|EAW77752.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119598159|gb|EAW77753.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123992443|gb|ABM83980.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|123999492|gb|ABM87302.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|148694121|gb|EDL26068.1| RAB11a, member RAS oncogene family [Mus musculus]
gi|149041958|gb|EDL95799.1| RAB11a, member RAS oncogene family [Rattus norvegicus]
gi|189053091|dbj|BAG34713.1| unnamed protein product [Homo sapiens]
gi|296483650|tpg|DAA25765.1| TPA: Ras-related protein Rab-11A [Bos taurus]
gi|344235576|gb|EGV91679.1| Ras-related protein Rab-11A [Cricetulus griseus]
gi|351695550|gb|EHA98468.1| Ras-related protein Rab-11A [Heterocephalus glaber]
gi|355692810|gb|EHH27413.1| hypothetical protein EGK_17606 [Macaca mulatta]
gi|355778116|gb|EHH63152.1| hypothetical protein EGM_16064 [Macaca fascicularis]
gi|380817586|gb|AFE80667.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|383422481|gb|AFH34454.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|384950094|gb|AFI38652.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|410220856|gb|JAA07647.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|410306776|gb|JAA31988.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|410342705|gb|JAA40299.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|431895896|gb|ELK05314.1| Ras-related protein Rab-11A [Pteropus alecto]
gi|432092221|gb|ELK24845.1| Ras-related protein Rab-11A [Myotis davidii]
gi|1089909|prf||2018147A GTP-binding protein rab11
Length = 216
Score = 261 bits (668), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 159/205 (77%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAEK GL F+ETSAL+STNVE AF T+LTEIYRIVS+K ++ E++
Sbjct: 136 TDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRREND------- 188
Query: 181 LKATNIVVPGQEPES--GRRSYNCC 203
+ +N VVP P + + CC
Sbjct: 189 MSPSNNVVPIHVPPTTENKPKVQCC 213
>gi|327300815|ref|XP_003235100.1| GTP-binding protein ypt3 [Trichophyton rubrum CBS 118892]
gi|326462452|gb|EGD87905.1| GTP-binding protein ypt3 [Trichophyton rubrum CBS 118892]
gi|326468660|gb|EGD92669.1| GTP-binding protein ypt3 [Trichophyton tonsurans CBS 112818]
gi|326485125|gb|EGE09135.1| GTP-binding protein ypt3 [Trichophyton equinum CBS 127.97]
Length = 210
Score = 261 bits (668), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 125/203 (61%), Positives = 161/203 (79%), Gaps = 6/203 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +K+QIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD++K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK+FA + L F+ETSAL+++NVELAF +LTEI+RIVS KAL + D S++
Sbjct: 134 TEEAKQFASENNLSFIETSALDASNVELAFQNILTEIFRIVSSKALESGD-----SSANQ 188
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
L +V + P+S ++ CC
Sbjct: 189 LGDRKVVEITKTPDSEKKQ-GCC 210
>gi|380492729|emb|CCF34399.1| Ras-like protein Rab-11B [Colletotrichum higginsianum]
Length = 212
Score = 261 bits (668), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 126/203 (62%), Positives = 157/203 (77%), Gaps = 4/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK FA + L F+ETSAL+++NVELAF +LTEIYRIVS KAL + D G +++
Sbjct: 134 TEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGD----GPQATI 189
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
I + +S + CC
Sbjct: 190 GAGPGISLTKPADDSAEKGGKCC 212
>gi|168006845|ref|XP_001756119.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162692629|gb|EDQ78985.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 130/203 (64%), Positives = 157/203 (77%), Gaps = 5/203 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITK +++NV RWL+ELR HAD NI+IMLVGNKSDL+ LR V
Sbjct: 77 ITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIMLVGNKSDLKHLRGVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T+DA+ F+EKEGL F+ETSALESTNVE AF +LTEIYRIVSKKAL + + + G
Sbjct: 137 TDDAQSFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKALASEENTTEGPG--- 193
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ TNI VP + CC
Sbjct: 194 -QGTNI-VPLDSNAPDLKKKGCC 214
>gi|255647659|gb|ACU24291.1| unknown [Glycine max]
Length = 216
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 130/211 (61%), Positives = 153/211 (72%), Gaps = 17/211 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
L GDS VGKS +L+RF R+EF L+SK+TIGVEF T+TL + K VKAQIWDTAGQERYRA
Sbjct: 17 LTGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITKRQ+FDNV RWL ELR HAD NI+IM+ GNKSDL LRAV
Sbjct: 77 ITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLSHLRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
+D + AE+EGL F+ETSALE+TN+E AF T+LTEIY IVSKKAL A +
Sbjct: 137 EDDGQALAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQE---------- 186
Query: 181 LKATNIVVPGQEP------ESGRRSYNCCTS 205
A +PGQ SG CC++
Sbjct: 187 -AAVGTTLPGQGTTINVGDASGNTKRGCCST 216
>gi|7108528|gb|AAF36458.1|AF127669_1 small GTPase [Mus musculus]
Length = 216
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 159/205 (77%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAEK GL F+ETSAL+STNVE AF T+LTEIYRIVS+K ++ E++
Sbjct: 136 TDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKHMSDRREND------- 188
Query: 181 LKATNIVVPGQEPES--GRRSYNCC 203
+ +N VVP P + + CC
Sbjct: 189 MSPSNNVVPIHVPPTTENKPKVQCC 213
>gi|168027772|ref|XP_001766403.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682312|gb|EDQ68731.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 216
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 130/203 (64%), Positives = 157/203 (77%), Gaps = 5/203 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITK +++NV RWL+ELR HAD NI+IMLVGNKSDL+ LR V
Sbjct: 77 ITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIMLVGNKSDLKHLRGVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T+DA+ F+EKEGL F+ETSALESTNVE AF +LTEIYRIVSKKAL + + + G
Sbjct: 137 TDDAQAFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKALASEENTTEGPG--- 193
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ TNI VP + CC
Sbjct: 194 -QGTNI-VPLDSNAPDLKKKGCC 214
>gi|356559913|ref|XP_003548240.1| PREDICTED: ras-related protein RABA3-like [Glycine max]
Length = 244
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 132/196 (67%), Positives = 159/196 (81%), Gaps = 2/196 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGK+Q+L+RFA++EF DSK+TIGVEFQT+T+ I+ K +KAQIWDTAGQERYRA
Sbjct: 37 VIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTRTVTINAKVIKAQIWDTAGQERYRA 96
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA+GAMLVYDITKRQSFD+VARW+EELR HAD +I+IMLVGNK+DL R VP
Sbjct: 97 VTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIMLVGNKADLVDQRMVP 156
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSS-S 179
TEDA EFAE +GL F ETSAL NVE AFL +L EI R+VSKKAL E+G ++ +
Sbjct: 157 TEDAVEFAEDQGLFFSETSALSGDNVESAFLKLLEEINRVVSKKALECGLGKENGDTNVA 216
Query: 180 LLKATNI-VVPGQEPE 194
LK T + ++ G E E
Sbjct: 217 SLKGTKVDIILGPELE 232
>gi|327285863|ref|XP_003227651.1| PREDICTED: ras-related protein Rab-11A-like [Anolis carolinensis]
Length = 236
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 159/205 (77%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 36 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 95
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 96 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 155
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAEK GL F+ETSAL+STNVE AF T+LTEIYRIVS+K ++ E++
Sbjct: 156 TDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRREND------- 208
Query: 181 LKATNIVVPGQEPES--GRRSYNCC 203
+ +N VVP P + + CC
Sbjct: 209 MSPSNNVVPIHVPPTTENKPKMQCC 233
>gi|315048511|ref|XP_003173630.1| hypothetical protein MGYG_03805 [Arthroderma gypseum CBS 118893]
gi|311341597|gb|EFR00800.1| hypothetical protein MGYG_03805 [Arthroderma gypseum CBS 118893]
Length = 210
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 125/203 (61%), Positives = 161/203 (79%), Gaps = 6/203 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +K+QIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD++K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK+FA + L F+ETSAL+++NVELAF +LTEI+RIVS KAL + D S++
Sbjct: 134 TEEAKQFASENNLSFIETSALDASNVELAFQNILTEIFRIVSSKALESGD-----SSANQ 188
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
L +V + P+S ++ CC
Sbjct: 189 LGDRKVVEITKTPDSEKKP-GCC 210
>gi|121703301|ref|XP_001269915.1| Ras GTPase Rab11, putative [Aspergillus clavatus NRRL 1]
gi|119398058|gb|EAW08489.1| Ras GTPase Rab11, putative [Aspergillus clavatus NRRL 1]
Length = 230
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 129/206 (62%), Positives = 159/206 (77%), Gaps = 11/206 (5%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 33 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 92
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q++DNV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 93 ITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 152
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK+FA + L F+ETSAL+++NVELAF +LTEIYRIVS KA+ +S G ++L
Sbjct: 153 TDEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKAIIEGGDS---GQATL 209
Query: 181 LKATNIVV---PGQEPESGRRSYNCC 203
I V P E + G CC
Sbjct: 210 SSGRTIEVSKTPDTESKQG-----CC 230
>gi|330923009|ref|XP_003300061.1| hypothetical protein PTT_11209 [Pyrenophora teres f. teres 0-1]
gi|311325975|gb|EFQ91841.1| hypothetical protein PTT_11209 [Pyrenophora teres f. teres 0-1]
gi|451845858|gb|EMD59169.1| hypothetical protein COCSADRAFT_164753 [Cochliobolus sativus
ND90Pr]
Length = 211
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 128/203 (63%), Positives = 158/203 (77%), Gaps = 5/203 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK+FA + L F+ETSAL+++NVELAF +LTEIYRIVS KAL D+ E GS +
Sbjct: 134 TEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKAL---DQGE--GSGPV 188
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
L V+ + + CC
Sbjct: 189 LGNDRKVLEISKSADAEQKKGCC 211
>gi|294460998|gb|ADE76069.1| unknown [Picea sitchensis]
Length = 214
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 132/203 (65%), Positives = 160/203 (78%), Gaps = 6/203 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF L+SK+TIGVEF T+T+ + K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKTIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITK +FDNV RWL ELR HAD NI+IMLVGNKSDL +RAVP
Sbjct: 77 ITSAYYRGAVGALLVYDITKNATFDNVKRWLRELRDHADSNIVIMLVGNKSDLSHMRAVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
+DA++FAEKEGL FMETSALESTNVE +F ++LTEIY+IV +K+L A + + +G S
Sbjct: 137 IDDAQDFAEKEGLSFMETSALESTNVEKSFQSILTEIYQIVKRKSLAAEEAASAGPS--- 193
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ T I E + +RS CC
Sbjct: 194 -QGTPINASDAETIAKKRS--CC 213
>gi|351722751|ref|NP_001236487.1| uncharacterized protein LOC100499822 [Glycine max]
gi|255626919|gb|ACU13804.1| unknown [Glycine max]
Length = 218
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 158/205 (77%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
IGDS VGKS LL+RF R+EF+L+SK+TIGVEF TK+L I K +KAQIWDTAGQERYRA
Sbjct: 18 FIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLDIDAKVIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+R +F+N ARWL+ELR H D NI++ML+GNKSDL L AVP
Sbjct: 78 ITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED K FAEKE L FMETSALE+TNVE AF VL++IYRIVSK+A+ A + + S S
Sbjct: 138 TEDGKSFAEKESLYFMETSALEATNVENAFTEVLSQIYRIVSKRAVEAGNNASSSAVPSK 197
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ N+ ++ S + CC++
Sbjct: 198 GQTINV----KDDSSVLKKIGCCSN 218
>gi|115456287|ref|NP_001051744.1| Os03g0823700 [Oryza sativa Japonica Group]
gi|27545031|gb|AAO18437.1| Ras-related GTP-binding protein [Oryza sativa Japonica Group]
gi|108711823|gb|ABF99618.1| Ras-related protein Rab11A, putative, expressed [Oryza sativa
Japonica Group]
gi|113550215|dbj|BAF13658.1| Os03g0823700 [Oryza sativa Japonica Group]
gi|215692445|dbj|BAG87865.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222626072|gb|EEE60204.1| hypothetical protein OsJ_13172 [Oryza sativa Japonica Group]
Length = 215
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/205 (62%), Positives = 157/205 (76%), Gaps = 6/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+TL I + +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGQTIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITK+Q+F+N+ RWL ELR HAD NI+IM+VGNKSDL LR+VP
Sbjct: 77 ITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIMMVGNKSDLNHLRSVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
ED + AEKEGL F+ETSALE+ NVE AF T+L +I++I+SKKAL A E+ GS
Sbjct: 137 EEDGQALAEKEGLSFLETSALEALNVEKAFQTILKDIHQIISKKALAAQ---EAAGSGPP 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ T I V + R CC+S
Sbjct: 194 TQGTTINVTDSAVNTKR---GCCSS 215
>gi|425771377|gb|EKV09822.1| GTP-binding protein yptV1 [Penicillium digitatum Pd1]
gi|425776994|gb|EKV15191.1| GTP-binding protein yptV1 [Penicillium digitatum PHI26]
Length = 209
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/203 (62%), Positives = 158/203 (77%), Gaps = 7/203 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDISKHQTYENVNRWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK+FA + L F+ETSAL+++NVELAF +LTEIYRIVS KAL D E G +
Sbjct: 134 TEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKAL---DNGE--GGQQV 188
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
L ++ P + + + CC
Sbjct: 189 LDRRPVIDPSK--QDSEQKPGCC 209
>gi|357452859|ref|XP_003596706.1| Ras-related protein Rab-11A [Medicago truncatula]
gi|355485754|gb|AES66957.1| Ras-related protein Rab-11A [Medicago truncatula]
Length = 218
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/205 (62%), Positives = 160/205 (78%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF TK+L + K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLTVDAKVIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+R +F+N ARWL+ELR H D NI++ML+GNKSDL L AVP
Sbjct: 78 ITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED K FAE+E L FMETSALE+TNVE AF VL++IYRIVSKKA+ A + S S+
Sbjct: 138 TEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKKAVEAGEGGSSSSVPSV 197
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ N+ +E S + + CC++
Sbjct: 198 GQTINV----KEDSSVLKRFGCCSN 218
>gi|409046556|gb|EKM56036.1| hypothetical protein PHACADRAFT_257063 [Phanerochaete carnosa
HHB-10118-sp]
Length = 212
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 129/205 (62%), Positives = 162/205 (79%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T++L I K VKAQIWDTAGQERYRA
Sbjct: 15 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSLAIDGKTVKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q++ NV RWL+ELR HAD+NI+IMLVGNKSDL+ LRAVP
Sbjct: 75 ITSAYYRGAVGALLVYDISKHQTYSNVTRWLKELRDHADQNIVIMLVGNKSDLKHLRAVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL--TANDESESGGSS 178
T++AK F+ + GL F+ETSAL+++NVE AF T+LT+IYRIVS K+L +A+ S G +
Sbjct: 135 TDEAKAFSSENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSLEQSADPIKPSTGDN 194
Query: 179 SLLKATNIVVPGQEPESGRRSYNCC 203
L V P +P++ S CC
Sbjct: 195 IL------VTPSVDPQAQSGS-KCC 212
>gi|115396826|ref|XP_001214052.1| GTP-binding protein ypt3 [Aspergillus terreus NIH2624]
gi|114193621|gb|EAU35321.1| GTP-binding protein ypt3 [Aspergillus terreus NIH2624]
Length = 206
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 129/204 (63%), Positives = 158/204 (77%), Gaps = 8/204 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
L DS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 10 LTDDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 69
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q++DNV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 70 ITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 129
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK+FA + L F+ETSAL+++NVELAF +LTEIYRIVS KAL +SG S +
Sbjct: 130 TEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKAL------DSGDSQAP 183
Query: 181 LKATNIVVP-GQEPESGRRSYNCC 203
L V+ Q P+S + CC
Sbjct: 184 LGDRRPVIDVSQTPDSESKQ-GCC 206
>gi|168048483|ref|XP_001776696.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162671988|gb|EDQ58532.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 130/206 (63%), Positives = 161/206 (78%), Gaps = 8/206 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITK +++NV RWL+ELR HAD NI+IMLVGNKSDL+ LR V
Sbjct: 77 ITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIMLVGNKSDLKHLRGVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T+DA+ F+EKEGL F+ETSALESTNVE AF +LTEIYRIVSKKAL + + + G
Sbjct: 137 TDDAQAFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKALASEENTTEGPG--- 193
Query: 181 LKATNIV-VPGQEPESGRRSYNCCTS 205
+ TNIV + P+ + CC++
Sbjct: 194 -QGTNIVPLDSNAPDLKK---GCCSA 215
>gi|296809015|ref|XP_002844846.1| GTP-binding protein ypt3 [Arthroderma otae CBS 113480]
gi|238844329|gb|EEQ33991.1| GTP-binding protein ypt3 [Arthroderma otae CBS 113480]
Length = 212
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/204 (62%), Positives = 162/204 (79%), Gaps = 8/204 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +K+QIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD++K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSS- 179
T++AK+FA + L F+ETSAL+++NVELAF +LTEI+RIVS KAL ESG SS+
Sbjct: 136 TDEAKQFASENNLSFIETSALDASNVELAFQNILTEIFRIVSSKAL------ESGDSSAN 189
Query: 180 LLKATNIVVPGQEPESGRRSYNCC 203
L +V + P+S ++ CC
Sbjct: 190 QLGDRKVVEITKTPDSEKKP-GCC 212
>gi|349603694|gb|AEP99464.1| Ras-like protein Rab-11B-like protein [Equus caballus]
Length = 275
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 159/205 (77%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAEK GL F+ETSAL+STNVE AF T+LTEIYRIVS+K ++ E++
Sbjct: 136 TDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRREND------- 188
Query: 181 LKATNIVVPGQEPES--GRRSYNCC 203
+ +N VVP P + + CC
Sbjct: 189 MSPSNNVVPIHVPPTTENKPKVQCC 213
>gi|76257404|gb|ABA41006.1| Rab11 protein [Aiptasia pulchella]
Length = 218
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 155/205 (75%), Gaps = 2/205 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IM VGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMQVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK FAEK GL F+ETSAL+STNVE+AF +LTEIY IVS+K + +D S GS
Sbjct: 136 TDEAKAFAEKNGLSFIETSALDSTNVEVAFQNILTEIYHIVSQKQI--HDSPTSDGSHPS 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
I V E R+ CC +
Sbjct: 194 NNVQTIHVAPTTDEDRRKRVQCCNT 218
>gi|357461039|ref|XP_003600801.1| Ras-related protein Rab11A [Medicago truncatula]
gi|355489849|gb|AES71052.1| Ras-related protein Rab11A [Medicago truncatula]
Length = 216
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 129/205 (62%), Positives = 158/205 (77%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+T+ + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTIQVEGKTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITKRQ+F+NV RWL ELR HAD NI+IML GNKSDL LRAV
Sbjct: 77 ITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIMLAGNKSDLNHLRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
++DA+ AEKE L F+ETSALE+ NVE AF T+L +IY+I+SKKAL A ES ++S+
Sbjct: 137 SDDAQNLAEKETLSFLETSALEALNVEKAFQTILFDIYQIISKKALAAQ---ESASTTSV 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
T I V ++S CC++
Sbjct: 194 PHGTTINVSNMSGTVEKKS--CCSN 216
>gi|15217568|ref|NP_172434.1| Ras-related protein RABA2a [Arabidopsis thaliana]
gi|3024516|sp|O04486.1|RAA2A_ARATH RecName: Full=Ras-related protein RABA2a; Short=AtRABA2a; AltName:
Full=Ras-related protein Rab11C; Short=AtRab11C; Flags:
Precursor
gi|2160157|gb|AAB60720.1| Strong similarity to A. thaliana ara-2 (gb|ATHARA2). ESTs
gb|ATTS2483,gb|ATTS2484,gb|AA042159 come from this gene
[Arabidopsis thaliana]
gi|2231303|gb|AAB61994.1| ras-related small GTPase [Arabidopsis thaliana]
gi|15010638|gb|AAK73978.1| At1g09630/F21M12_2 [Arabidopsis thaliana]
gi|21553810|gb|AAM62903.1| putative RAS-related protein RAB11C [Arabidopsis thaliana]
gi|22137284|gb|AAM91487.1| At1g09630/F21M12_2 [Arabidopsis thaliana]
gi|332190350|gb|AEE28471.1| Ras-related protein RABA2a [Arabidopsis thaliana]
Length = 217
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 123/206 (59%), Positives = 166/206 (80%), Gaps = 5/206 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF L+SK+TIGVEF T+TL + + VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGA+GA+LVYD+TK +F+NV+RWL+ELR HAD NI+IML+GNK+DL+ LRAV
Sbjct: 77 ITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVA 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA+ +AEKEGL F+ETSALE+ NVE AF T+L+E+YRI+SKK+++++ ++ ++++
Sbjct: 137 TEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSISSD---QTTANANI 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
+ I V + ++ CC+SS
Sbjct: 194 KEGQTIDVAATSESNAKKP--CCSSS 217
>gi|226491888|ref|NP_001147252.1| ras-related protein Rab11C [Zea mays]
gi|195609118|gb|ACG26389.1| ras-related protein Rab11C [Zea mays]
Length = 217
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 124/206 (60%), Positives = 166/206 (80%), Gaps = 5/206 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF L+SK+TIGVEF T+TL + + VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGA+GA+LVYD+TK +F+NV+RWL+ELR HAD NI+IML+GNK+DL+ LRAV
Sbjct: 77 ITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADYNIVIMLIGNKTDLKHLRAVA 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA+ +AEKEGL F+ETSALE+ NVE AF T+L+EIYRI+SKK+++++ ++ ++++
Sbjct: 137 TEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEIYRIISKKSISSD---QASANANV 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
+ I V + ++ CC+SS
Sbjct: 194 KEGQTIDVAASSESNTKKP--CCSSS 217
>gi|156360921|ref|XP_001625271.1| predicted protein [Nematostella vectensis]
gi|156212096|gb|EDO33171.1| predicted protein [Nematostella vectensis]
Length = 218
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 126/205 (61%), Positives = 156/205 (76%), Gaps = 2/205 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK FAEK GL F+ETSAL+STNVE+AF +LTEIY IVS+K + +D S GS
Sbjct: 136 TDEAKAFAEKNGLSFIETSALDSTNVEVAFHNILTEIYHIVSQKQI--HDSPSSDGSHPS 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
I V + ++ CC +
Sbjct: 194 NNVQTIHVAPTTDDDRKKRVQCCNA 218
>gi|15219955|ref|NP_173136.1| Ras-related protein RABA1b [Arabidopsis thaliana]
gi|3024526|sp|Q39222.1|RAA1B_ARATH RecName: Full=Ras-related protein RABA1b; Short=AtRABA1b; AltName:
Full=Ras-related protein Rab11; Short=AtRab11
gi|9802771|gb|AAF99840.1|AC051629_7 GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|451860|gb|AAA32872.1| small GTP-binding protein [Arabidopsis thaliana]
gi|30102592|gb|AAP21214.1| At1g16920 [Arabidopsis thaliana]
gi|110735723|dbj|BAE99841.1| hypothetical protein [Arabidopsis thaliana]
gi|332191401|gb|AEE29522.1| Ras-related protein RABA1b [Arabidopsis thaliana]
Length = 216
Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 128/205 (62%), Positives = 160/205 (78%), Gaps = 6/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EF+L+SK+TIGVEF T+TL + K VKAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+R +F+NV RWL+EL+ H D NI++MLVGNKSDL L AVP
Sbjct: 78 ITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED K +AE+E LCFMETSALE+TNVE AF VLT+IYRI SKK + A ++ G++S+
Sbjct: 138 TEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGED----GNASV 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V + S + CC++
Sbjct: 194 PKGEKIEV--KNDVSALKKLGCCSN 216
>gi|224124790|ref|XP_002329949.1| predicted protein [Populus trichocarpa]
gi|222871971|gb|EEF09102.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 133/211 (63%), Positives = 155/211 (73%), Gaps = 17/211 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+TL + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITKRQ+FDNV RWL ELR HAD NI+IM+ GNKSDL+ LRAV
Sbjct: 77 ITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLKHLRAVL 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
ED AEKEGL F+ETSALE+TN+E AF T+LTEIY I+SKKA ++
Sbjct: 137 EEDGHALAEKEGLSFLETSALEATNIEKAFQTILTEIYHIISKKA-----------LAAQ 185
Query: 181 LKATNIVVPGQ------EPESGRRSYNCCTS 205
A N VPGQ SG S CC++
Sbjct: 186 EAAANSTVPGQGTTINVADASGNTSKGCCST 216
>gi|168041027|ref|XP_001772994.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162675727|gb|EDQ62219.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 130/203 (64%), Positives = 155/203 (76%), Gaps = 5/203 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITK +++NV RWL+ELR HAD NI+IMLVGNKSDL LR V
Sbjct: 77 ITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRGVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
+DA+ FAEKEGL F+ETSALESTNVE AF +LTEIYRIVSKKAL + + + G
Sbjct: 137 LDDAQSFAEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKALASEENATEGPG--- 193
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ TNI VP + CC
Sbjct: 194 -QGTNI-VPLDSNSPDLKKKGCC 214
>gi|356520251|ref|XP_003528777.1| PREDICTED: ras-related protein RABA3-like [Glycine max]
Length = 245
Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 131/197 (66%), Positives = 158/197 (80%), Gaps = 3/197 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGK+Q+L+RFA++EF DSK+TIGVEFQT+T+ I+ K +KAQIWDTAGQERYRA
Sbjct: 37 VIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTRTVTINGKVIKAQIWDTAGQERYRA 96
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA+GAMLVYDITKRQSFD+VARW+EELR HAD +I+IMLVGNK+DL R VP
Sbjct: 97 VTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIMLVGNKADLVDQRMVP 156
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA EFAE +GL F ETSAL NVE AFL +L EI R+VSKKAL E+G ++ +
Sbjct: 157 TEDAVEFAEDQGLFFSETSALSGDNVESAFLKLLEEINRVVSKKALECGYGKENGDNNVV 216
Query: 181 --LKATNI-VVPGQEPE 194
L T + ++ G E E
Sbjct: 217 ASLNGTKVDIILGPELE 233
>gi|351722661|ref|NP_001235972.1| small GTP-binding protein [Glycine max]
gi|22597172|gb|AAN03473.1| small GTP-binding protein [Glycine max]
Length = 218
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 157/205 (76%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF TK+L I K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDAKVIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+R +F+N ARWL+ELR H D NI++ML+GNKSDL L AVP
Sbjct: 78 ITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED K FAEKE L FMETSALE+TNVE AF VL++IYRIVSK+ + A + S S
Sbjct: 138 TEDGKSFAEKESLYFMETSALEATNVENAFTEVLSQIYRIVSKRTVEAGKNASSSAVPSK 197
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ N+ ++ S + CC++
Sbjct: 198 GQTINV----KDDSSVLKKIGCCSN 218
>gi|296088976|emb|CBI38679.3| unnamed protein product [Vitis vinifera]
Length = 239
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 128/188 (68%), Positives = 154/188 (81%), Gaps = 1/188 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGK+Q+L+RF ++EF DSK+TIGVEFQT+T+ I K +KAQIWDTAGQERYRA
Sbjct: 34 VIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTRTVTIKSKVIKAQIWDTAGQERYRA 93
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA+GAMLVYDITKRQ+FD+VARW+EELR HAD +I+IMLVGNK+DL RAVP
Sbjct: 94 VTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRAHADTSIVIMLVGNKADLVDQRAVP 153
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
+EDA EF+E +GL F ETSAL NVE AF VL EIY +VSKKAL + +S +G +S
Sbjct: 154 SEDAVEFSEDQGLFFSETSALNGDNVETAFFRVLEEIYGVVSKKALECDGKS-NGCDASN 212
Query: 181 LKATNIVV 188
LK + I V
Sbjct: 213 LKGSKIDV 220
>gi|388493146|gb|AFK34639.1| unknown [Medicago truncatula]
Length = 218
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 128/205 (62%), Positives = 160/205 (78%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF TK+L + K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLTVDAKVIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+R +F+N ARWL+ELR H D NI++ML+GNKSDL L AVP
Sbjct: 78 ITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED K FAE+E L FMETSALE+TNVE AF VL++IYRIVSKKA+ A + S S+
Sbjct: 138 TEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKKAVEAGEGGSSSSVPSV 197
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ N+ +E S + + CC++
Sbjct: 198 GQTINV----KEDFSVLKRFGCCSN 218
>gi|297850098|ref|XP_002892930.1| hypothetical protein ARALYDRAFT_471894 [Arabidopsis lyrata subsp.
lyrata]
gi|297338772|gb|EFH69189.1| hypothetical protein ARALYDRAFT_471894 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 160/205 (78%), Gaps = 6/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EF+L+SK+TIGVEF T+TL + K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+R +F+NV RWL+EL+ H D NI++MLVGNKSDL L AVP
Sbjct: 78 ITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED K +AE+E LCFMETSALE+TNVE AF VLT+IYRI SKK + A ++ G++S+
Sbjct: 138 TEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGED----GNASV 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V + S + CC++
Sbjct: 194 PKGEKIEV--KNDVSALKKLGCCSN 216
>gi|84000297|ref|NP_001033251.1| ras-related protein Rab-11A [Bos taurus]
gi|116255983|sp|Q2TA29.3|RB11A_BOVIN RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|83405346|gb|AAI11144.1| RAB11A, member RAS oncogene family [Bos taurus]
Length = 216
Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 126/205 (61%), Positives = 158/205 (77%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAEK GL F+ETSAL+ TNVE AF T+LTEIYRIVS+K ++ E++
Sbjct: 136 TDEARAFAEKNGLSFIETSALDYTNVEAAFQTILTEIYRIVSQKQMSDRREND------- 188
Query: 181 LKATNIVVPGQEPES--GRRSYNCC 203
+ +N VVP P + + CC
Sbjct: 189 MSPSNNVVPIHVPPTTENKPKVQCC 213
>gi|359489460|ref|XP_002262618.2| PREDICTED: ras-related protein RABA3-like [Vitis vinifera]
Length = 235
Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 128/188 (68%), Positives = 154/188 (81%), Gaps = 1/188 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGK+Q+L+RF ++EF DSK+TIGVEFQT+T+ I K +KAQIWDTAGQERYRA
Sbjct: 30 VIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTRTVTIKSKVIKAQIWDTAGQERYRA 89
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA+GAMLVYDITKRQ+FD+VARW+EELR HAD +I+IMLVGNK+DL RAVP
Sbjct: 90 VTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRAHADTSIVIMLVGNKADLVDQRAVP 149
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
+EDA EF+E +GL F ETSAL NVE AF VL EIY +VSKKAL + +S +G +S
Sbjct: 150 SEDAVEFSEDQGLFFSETSALNGDNVETAFFRVLEEIYGVVSKKALECDGKS-NGCDASN 208
Query: 181 LKATNIVV 188
LK + I V
Sbjct: 209 LKGSKIDV 216
>gi|158828213|gb|ABW81091.1| Gtpbnd1 [Cleome spinosa]
Length = 216
Score = 259 bits (662), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 126/191 (65%), Positives = 151/191 (79%), Gaps = 11/191 (5%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+TL + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITKRQ+F+NV RWL ELR HAD NI+IM+ GNKSDL LR++
Sbjct: 77 ITSAYYRGAVGALLVYDITKRQTFENVPRWLRELRDHADSNIVIMMAGNKSDLNHLRSIS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
ED + AEKEGL F+ETSALE++N+E AF ++L+EIY IVSKKAL A E+ GS
Sbjct: 137 DEDGRSLAEKEGLSFLETSALEASNIEKAFQSILSEIYHIVSKKALAAQ---EAAGS--- 190
Query: 181 LKATNIVVPGQ 191
+ VPGQ
Sbjct: 191 -----MAVPGQ 196
>gi|302771698|ref|XP_002969267.1| rab family GTPase [Selaginella moellendorffii]
gi|302810305|ref|XP_002986844.1| rab family GTPase [Selaginella moellendorffii]
gi|300145498|gb|EFJ12174.1| rab family GTPase [Selaginella moellendorffii]
gi|300162743|gb|EFJ29355.1| rab family GTPase [Selaginella moellendorffii]
Length = 217
Score = 259 bits (662), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 126/205 (61%), Positives = 160/205 (78%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKLVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDIT+ +++NV RWL+EL+ H D NI++MLVGNKSDL LRAV
Sbjct: 77 ITSAYYRGAVGALLVYDITRPVTYENVERWLKELKDHTDSNIVVMLVGNKSDLRHLRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED + F+E+EGL FMETSALESTNVE AF +LT+IYR+VSKKAL ++ S++
Sbjct: 137 TEDGQAFSEREGLYFMETSALESTNVENAFKQILTQIYRVVSKKALDVGEDP----SAAP 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V G++ + + CC++
Sbjct: 193 AKGQTINVGGKDDVTATKKVGCCSA 217
>gi|328860505|gb|EGG09611.1| hypothetical protein MELLADRAFT_115734 [Melampsora larici-populina
98AG31]
Length = 214
Score = 259 bits (662), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 124/203 (61%), Positives = 159/203 (78%), Gaps = 3/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+++SK+TIGVEF T+++V+ K +KAQIWDTAGQERYRA
Sbjct: 15 LIGDSGVGKSNLLSRFTRNEFNMESKSTIGVEFATRSIVVDSKTIKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K+QS+ +V RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 75 ITSAYYRGAVGALLVYDISKQQSYTHVQRWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK FA + L F+ETSA++++NVE AF +LT+IYRIVS KAL ++ +S S S
Sbjct: 135 TEEAKAFAAENNLSFIETSAMDASNVESAFQNILTDIYRIVSSKALESSGDSVGPTSGST 194
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ T G + +G + CC
Sbjct: 195 ITVTPTADDGAKSNAGGK---CC 214
>gi|41056251|ref|NP_956417.1| RAB11a, member RAS oncogene family, like [Danio rerio]
gi|32766639|gb|AAH55141.1| Zgc:63565 [Danio rerio]
Length = 216
Score = 259 bits (661), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 128/206 (62%), Positives = 162/206 (78%), Gaps = 5/206 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIHVEGKTVKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++N RWL+EL+ HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
++AK FAEK GL F+ETSAL+S+NVELAF T+LTEIYRIVS++ ++ + SS +
Sbjct: 136 MDEAKAFAEKHGLSFLETSALDSSNVELAFQTILTEIYRIVSQRQMSGRGDDSFSPSSKV 195
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
+ T V P Q SG++S CC ++
Sbjct: 196 VPIT--VQPTQ--NSGKQS-ACCQNN 216
>gi|384490318|gb|EIE81540.1| small GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 259 bits (661), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 127/204 (62%), Positives = 160/204 (78%), Gaps = 8/204 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGK+ LL+RF R+EF+L+SK+TIGVEF T+++ + +K VKAQIWDTAGQERYRA
Sbjct: 15 LIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSVQVDNKTVKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K Q+++NV RWL+ELR HAD NI++MLVGNKSDL LRAVP
Sbjct: 75 ITSAYYRGAVGALLVYDIAKYQTYENVMRWLKELRDHADSNIVVMLVGNKSDLRHLRAVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL-TANDESESGGSSS 179
TE+AK+FA GL F+ETSAL+S+NVELAF +LTEIYRIVS KAL ++ND +
Sbjct: 135 TEEAKQFAADNGLSFIETSALDSSNVELAFQRILTEIYRIVSNKALESSNDVIRPTAGQT 194
Query: 180 LLKATNIVVPGQEPESGRRSYNCC 203
+ N+ P ++ + G CC
Sbjct: 195 I----NVNQPTEDEKQGG---GCC 211
>gi|212723022|ref|NP_001131943.1| Ras protein Rab11A [Zea mays]
gi|194692980|gb|ACF80574.1| unknown [Zea mays]
gi|195641328|gb|ACG40132.1| ras-related protein Rab11A [Zea mays]
gi|414589227|tpg|DAA39798.1| TPA: Ras protein Rab11A [Zea mays]
Length = 223
Score = 259 bits (661), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 130/206 (63%), Positives = 161/206 (78%), Gaps = 6/206 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++ F+LDSK+TIGVEF T+TL + +K +KAQIWDTAGQERYRA
Sbjct: 23 LIGDSGVGKSNLLSRFTKNTFALDSKSTIGVEFATRTLQVENKIIKAQIWDTAGQERYRA 82
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+TK +F+NV RWL+ELR HAD NI++ML+GNK+DL LR+V
Sbjct: 83 ITSAYYRGAVGALLVYDVTKVMTFENVKRWLKELRDHADSNIVVMLIGNKTDLRHLRSVA 142
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESG-GSSS 179
EDA FAE EGL F+ETSAL++TNVE AF TVL EIYRI+SKK L++ ESG GS +
Sbjct: 143 VEDAASFAESEGLFFIETSALDATNVEKAFHTVLAEIYRIISKKPLSSE---ESGLGSGN 199
Query: 180 LLKATNIVVPGQEPESGRRSYNCCTS 205
L + +I V SG + CC+S
Sbjct: 200 LREGQSIQVSA--TNSGALTSRCCSS 223
>gi|159467367|ref|XP_001691863.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|3025293|sp|Q39572.1|YPTC6_CHLRE RecName: Full=Ras-related protein YPTC6
gi|806728|gb|AAA82729.1| YptC6 [Chlamydomonas reinhardtii]
gi|158278590|gb|EDP04353.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 216
Score = 258 bits (660), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 128/204 (62%), Positives = 155/204 (75%), Gaps = 4/204 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITK +F+NV RWL+ELR HAD NI+IMLVGNKSDL+ LR V
Sbjct: 77 ITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVIMLVGNKSDLKHLRDVQ 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE A+ F E+EGL F+ETSALESTNVE AF +LTEIY IVSKK L + D G
Sbjct: 137 TEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYHIVSKKVLDSEDNRPKIGEGRD 196
Query: 181 LKATNIVVPGQEPESGRRSYNCCT 204
+ IV+ + G++ CC+
Sbjct: 197 V----IVIDNAHDDGGKKKGGCCS 216
>gi|21555752|gb|AAM63927.1| guanine nucleotide regulatory protein, putative [Arabidopsis
thaliana]
Length = 216
Score = 258 bits (660), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 159/205 (77%), Gaps = 6/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EF+L+SK+TIGVEF T+T + K VKAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTFKVDGKVVKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+R +F+NV RWL+EL+ H D NI++MLVGNKSDL L AVP
Sbjct: 78 ITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED K +AE+E LCFMETSALE+TNVE AF VLT+IYRI SKK + A ++ G++S+
Sbjct: 138 TEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGED----GNASV 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V + S + CC++
Sbjct: 194 PKGEKIEV--KNDVSALKKLGCCSN 216
>gi|219362849|ref|NP_001136551.1| uncharacterized protein LOC100216670 [Zea mays]
gi|194696142|gb|ACF82155.1| unknown [Zea mays]
gi|224033377|gb|ACN35764.1| unknown [Zea mays]
gi|414873681|tpg|DAA52238.1| TPA: hypothetical protein ZEAMMB73_597734 [Zea mays]
gi|414873682|tpg|DAA52239.1| TPA: hypothetical protein ZEAMMB73_597734 [Zea mays]
Length = 215
Score = 258 bits (660), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 128/207 (61%), Positives = 159/207 (76%), Gaps = 10/207 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+TL + K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITK+Q+F+N+ RWL ELR HAD NI+IM+VGNKSDL LR+V
Sbjct: 77 ITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIMMVGNKSDLNHLRSVA 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESG--GSS 178
ED + AEKEGL F+ETSALE+ NVE AF TVL++I++I+SKKAL A + + SG G
Sbjct: 137 EEDGQALAEKEGLSFLETSALEALNVEKAFQTVLSDIHQIISKKALAAQEAAGSGPPGQG 196
Query: 179 SLLKATNIVVPGQEPESGRRSYNCCTS 205
+ + NI P + G CC+S
Sbjct: 197 TTI---NIADPSANTKRG-----CCSS 215
>gi|37788823|gb|AAP51289.1| Rab11-1c [Limulus polyphemus]
Length = 217
Score = 258 bits (660), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 162/205 (79%), Gaps = 3/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD+NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAEK L F+ETSAL+STNVE+AF +LTEIYRIVS+K + + +++ S
Sbjct: 136 TDEARAFAEKNILSFIETSALDSTNVEVAFQQILTEIYRIVSQKQIRNDADNDPSPSGDN 195
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+KA +I P ++ +R CC +
Sbjct: 196 VKAISI-APTDSSDTRKR--QCCQT 217
>gi|242091375|ref|XP_002441520.1| hypothetical protein SORBIDRAFT_09g028560 [Sorghum bicolor]
gi|241946805|gb|EES19950.1| hypothetical protein SORBIDRAFT_09g028560 [Sorghum bicolor]
Length = 216
Score = 258 bits (660), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 157/205 (76%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYD+T+ +F+NV RW+ EL+ H D NI+IMLVGNK+DL LRAVP
Sbjct: 77 ITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGNKADLRHLRAVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAK FAE+E FMETSALE+ NVE AF VLT+IYR+VSKKAL D+ ++
Sbjct: 137 TEDAKAFAERENAFFMETSALEAMNVEDAFTEVLTQIYRVVSKKALDIGDD-----PAAP 191
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V G++ S + CC+S
Sbjct: 192 PKGQTINVGGKDDVSAVKKSACCSS 216
>gi|15222396|ref|NP_172221.1| RAB GTPase homolog A2B [Arabidopsis thaliana]
gi|297843530|ref|XP_002889646.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332320580|sp|Q9LNW1.2|RAA2B_ARATH RecName: Full=Ras-related protein RABA2b; Short=AtRABA2b
gi|297335488|gb|EFH65905.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332190000|gb|AEE28121.1| RAB GTPase homolog A2B [Arabidopsis thaliana]
Length = 214
Score = 258 bits (659), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 129/211 (61%), Positives = 155/211 (73%), Gaps = 19/211 (9%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+TL + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITKRQ+F+NV RWL ELR HAD NI+IM+ GNKSDL LR+V
Sbjct: 77 ITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVIMMAGNKSDLNHLRSVA 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
ED + AEKEGL F+ETSALE+TN+E AF T+L+EIY I+SKKAL A E+ G+
Sbjct: 137 DEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKKALAAQ---EAAGN--- 190
Query: 181 LKATNIVVPGQ------EPESGRRSYNCCTS 205
+PGQ S CC++
Sbjct: 191 -------LPGQGTAINISDSSATNRKGCCST 214
>gi|393220787|gb|EJD06273.1| ras-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 215
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 129/206 (62%), Positives = 161/206 (78%), Gaps = 7/206 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+T+ + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRTVQVDGKTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K+ +FDNV RWL+ELR HAD NI+IMLVGNKSDL+ LRAV
Sbjct: 77 ITSAYYRGAVGALLVYDIAKQSTFDNVQRWLKELRDHADSNIVIMLVGNKSDLKHLRAVL 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T+ A+ FAE+ L FMETSAL+++NVE AF ++LT+IYRIVS KAL D+++ G +
Sbjct: 137 TDVAQSFAEENNLSFMETSALDASNVEAAFQSILTDIYRIVSAKAL---DQNQGPGLTPG 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
+ T V +E ++G CC S+
Sbjct: 194 PRETITVSKSEEKKNG----GCCASN 215
>gi|326492460|dbj|BAK02013.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326496423|dbj|BAJ94673.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 222
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 127/204 (62%), Positives = 158/204 (77%), Gaps = 6/204 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++ FSLDSK+TIGVEF T+T + K +KAQIWDTAGQERYRA
Sbjct: 24 LIGDSGVGKSNLLSRFTKNTFSLDSKSTIGVEFATRTTQVEGKTIKAQIWDTAGQERYRA 83
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+TK +F+NV RWL+ELR HAD NI+IML+GNK+DL LR+V
Sbjct: 84 ITSAYYRGAVGALLVYDVTKAATFENVKRWLKELRDHADSNIVIMLIGNKTDLRHLRSVA 143
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T+ A FAE EGL F+ETSAL++TNV+ AF TVL EI+R++SKKALT D G+ +
Sbjct: 144 TDKAAGFAEWEGLSFIETSALDATNVDKAFQTVLAEIHRVISKKALTTEDS----GAGVV 199
Query: 181 LKATNIVVPGQEPESGRRSYNCCT 204
+ +I+V G EP S S CC+
Sbjct: 200 GEGQSILVSGGEPTS--VSSRCCS 221
>gi|320167252|gb|EFW44151.1| tubulovesicle-associated protein [Capsaspora owczarzaki ATCC 30864]
Length = 216
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 124/203 (61%), Positives = 155/203 (76%), Gaps = 3/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 77 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADANIVIMLVGNKSDLRHLRAVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T+D+K FAEK L F+ETSAL++TNVELAF +LTEIY IVS+K + +D +S++
Sbjct: 137 TDDSKSFAEKNNLSFIETSALDATNVELAFQNILTEIYHIVSQKTIVNDDHVAKVPTSNV 196
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
I V E ++ CC
Sbjct: 197 ---QTITVAPSEATDDKKKGGCC 216
>gi|395502702|ref|XP_003755716.1| PREDICTED: ras-related protein Rab-11A [Sarcophilus harrisii]
Length = 284
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 124/189 (65%), Positives = 154/189 (81%), Gaps = 7/189 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 84 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 143
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 144 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 203
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAEK GL F+ETSAL+STNVE AF T+LTEIYRIVS+K ++ E++
Sbjct: 204 TDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRREND------- 256
Query: 181 LKATNIVVP 189
+ +N VVP
Sbjct: 257 MSPSNNVVP 265
>gi|384500794|gb|EIE91285.1| GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 126/204 (61%), Positives = 160/204 (78%), Gaps = 8/204 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGK+ LL+RF R+EF+L+SK+TIGVEF T+++ + +K VK+QIWDTAGQERYRA
Sbjct: 15 LIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSVQVDNKTVKSQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K Q+++NV RWL+ELR HAD NI++MLVGNKSDL LRAVP
Sbjct: 75 ITSAYYRGAVGALLVYDIAKYQTYENVMRWLKELRDHADSNIVVMLVGNKSDLRHLRAVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL-TANDESESGGSSS 179
TE+AK+FA GL F+ETSAL+S+NVELAF +LTEIYRIVS KAL ++ND +
Sbjct: 135 TEEAKQFAADNGLSFIETSALDSSNVELAFQRILTEIYRIVSNKALESSNDVIRPTAGQT 194
Query: 180 LLKATNIVVPGQEPESGRRSYNCC 203
+ N+ P ++ + G CC
Sbjct: 195 I----NVNQPTEDEKQGG---GCC 211
>gi|225443554|ref|XP_002277579.1| PREDICTED: ras-related protein RABA1f [Vitis vinifera]
Length = 217
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 128/205 (62%), Positives = 157/205 (76%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D NI+IMLVGNK+DL LRAV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAK FAE+E FMETSALES NVE AF VLT+IYR+VS+KAL D+ ++L
Sbjct: 138 TEDAKAFAERENNFFMETSALESMNVENAFTEVLTQIYRVVSRKALDIGDD-----PAAL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V ++ S + CC++
Sbjct: 193 PKGQTINVGTKDDVSAVKKVGCCSA 217
>gi|49333370|gb|AAT64010.1| putative GTP-binding protein [Gossypium hirsutum]
Length = 218
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 159/205 (77%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T++L + K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL ELR H D NI++MLVGNKSDL L AV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDLRHLVAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED K FAEKE L FMETSALE+TNVE+AF VLT+IY IVSKKA+ +D+ G +S++
Sbjct: 138 TEDGKSFAEKESLYFMETSALEATNVEIAFAEVLTQIYNIVSKKAMETSDD---GAASAV 194
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ G++ + ++ CC+S
Sbjct: 195 PSKGEKIDVGKDVSAMKKG-GCCSS 218
>gi|321469541|gb|EFX80521.1| hypothetical protein DAPPUDRAFT_304112 [Daphnia pulex]
Length = 215
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 124/204 (60%), Positives = 160/204 (78%), Gaps = 7/204 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD+NI+IMLVGNKSDL LR+VP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIMLVGNKSDLRHLRSVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL-TANDESESGGSSS 179
T++A+ FAE+ L F+ETSAL+ TNVE AF +LTEIYRIVS++ + + DE G+S
Sbjct: 136 TDEARAFAERHSLSFIETSALDCTNVETAFHNILTEIYRIVSQRPMHDSPDEDSPPGNSG 195
Query: 180 LLKATNIVVPGQEPESGRRSYNCC 203
++ + EP +G +S NCC
Sbjct: 196 PIQ-----ISPTEPNAGSKS-NCC 213
>gi|31324876|gb|AAP48704.1| rab11-2 [Limulus polyphemus]
Length = 217
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 127/208 (61%), Positives = 159/208 (76%), Gaps = 9/208 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD+NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + T ND S SG +
Sbjct: 136 TDEARAFAEKNNLSFIETSALDSTNVESAFQQILTEIYRIVSQKQIRNDTDNDPSPSGDN 195
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCCTS 205
+ + P ++ R CC +
Sbjct: 196 VKPIS----IAPTDSSDT--RKKQCCQT 217
>gi|356569037|ref|XP_003552713.1| PREDICTED: ras-related protein Rab11C-like [Glycine max]
Length = 217
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 128/205 (62%), Positives = 157/205 (76%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+TL + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITKRQ+F+NV RWL ELR HAD NI+IM+ GNKSDL LRAV
Sbjct: 77 ITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIMMAGNKSDLNHLRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T+DA+ AE+E L F+ETSALE+ NVE AF T+L +IY+I+SKKAL A + ++SL
Sbjct: 137 TDDAQNLAEREALSFLETSALEAFNVEKAFQTILFDIYQIMSKKALAAQG---AASTTSL 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
T I V ++S CC++
Sbjct: 194 PHGTTINVSNMSGSVEKKS-ACCSN 217
>gi|37788825|gb|AAP51290.1| Rab11-1a [Limulus polyphemus]
gi|37900937|gb|AAP51291.1| Rab11-1b [Limulus polyphemus]
Length = 217
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 161/205 (78%), Gaps = 3/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD+NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + + +++ S
Sbjct: 136 TDEARAFAEKNILSFIETSALDSTNVEAAFQQILTEIYRIVSQKQIRNDADNDPSPSGDN 195
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+KA +I P ++ +R CC +
Sbjct: 196 VKAISI-APTDSSDTRKR--QCCQT 217
>gi|62858189|ref|NP_001016481.1| RAB11A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|148234494|ref|NP_001087765.1| RAB11A, member RAS oncogene family [Xenopus laevis]
gi|51895840|gb|AAH81187.1| MGC84419 protein [Xenopus laevis]
gi|89272900|emb|CAJ83200.1| RAB11A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|138519937|gb|AAI35894.1| RAB11A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 157/205 (76%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD I+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNKIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAEK GL F+ETSAL+STNVE AF T+LTEIYRIVS+ ++ E++
Sbjct: 136 TDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQTQMSDRREND------- 188
Query: 181 LKATNIVVPGQEPES--GRRSYNCC 203
+ +N VVP P + + CC
Sbjct: 189 MSPSNNVVPIHVPPTTENKPKMQCC 213
>gi|255568357|ref|XP_002525153.1| protein with unknown function [Ricinus communis]
gi|223535612|gb|EEF37280.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 129/205 (62%), Positives = 158/205 (77%), Gaps = 6/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D NI+IMLVGNK+DL LRAV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVT 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAK FAE+E FMETSALES NVE AF VLT+IYR+VS+KAL D+ ++L
Sbjct: 138 TEDAKAFAERESTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDD-----PAAL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V G++ S + CC++
Sbjct: 193 PKGQTINV-GKDDVSAVKKVGCCSA 216
>gi|188509942|gb|ACD56628.1| putative GTP-binding protein [Gossypium raimondii]
Length = 218
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 126/205 (61%), Positives = 159/205 (77%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T++L + K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL ELR H D NI++MLVGNKSDL L AV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDLRHLVAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED K FAEKE L FMETSALE+TNVE+AF VLT+IY +VSKKA+ +D+ G +S++
Sbjct: 138 TEDGKSFAEKESLYFMETSALEATNVEIAFAEVLTQIYNVVSKKAMETSDD---GAASAV 194
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ G++ + ++ CC+S
Sbjct: 195 PSKGEKIDVGKDVSAMKKG-GCCSS 218
>gi|341883094|gb|EGT39029.1| hypothetical protein CAEBREN_12928 [Caenorhabditis brenneri]
Length = 211
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 158/205 (77%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD+NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK +AE+ L F+ETSAL+STNVE AF +LTEIY+ VS K + ++ + GGS ++
Sbjct: 136 TDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHVGSDRQGYGGGSGTI 195
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ A P EP + CC S
Sbjct: 196 IPA-----PPTEPPKKQ----CCNS 211
>gi|336261533|ref|XP_003345554.1| hypothetical protein SMAC_06207 [Sordaria macrospora k-hell]
gi|380094775|emb|CCC07276.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 214
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 130/210 (61%), Positives = 160/210 (76%), Gaps = 16/210 (7%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K +F+NV RWL+ELR HAD+NI+IMLVGNKSDL LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDISKGVTFENVNRWLKELRDHADQNIVIMLVGNKSDLRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL-------TANDESE 173
TEDAK+FAE+ L F+ETSAL++TNVELAF +LTEIY+IVS K T ++
Sbjct: 134 TEDAKKFAEENHLSFIETSALDATNVELAFQNILTEIYKIVSTKNFDNGPSGSTEGHQNL 193
Query: 174 SGGSSSLLKATNIVVPGQEPESGRRSYNCC 203
SG S SL + N +P++ CC
Sbjct: 194 SGQSISLSQTAN------DPQA---KSGCC 214
>gi|224116364|ref|XP_002331964.1| predicted protein [Populus trichocarpa]
gi|222874741|gb|EEF11872.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 129/205 (62%), Positives = 156/205 (76%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D N +IMLVGNK+DL LRAV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANNVIMLVGNKADLRHLRAVA 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAK FAE+E FMETSALES NVE AF VLT+IYR+VS+KAL D+ S+ L
Sbjct: 138 TEDAKGFAERESTFFMETSALESMNVENAFTEVLTQIYRVVSRKALDVGDD-----STYL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V ++ S + CC+S
Sbjct: 193 PKGQTINVGSRDDVSAVKKAGCCSS 217
>gi|402084201|gb|EJT79219.1| Ras-like protein Rab-11A [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 211
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 124/186 (66%), Positives = 151/186 (81%), Gaps = 2/186 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDISKHQTYENVIRWLKELRDHADANIVIMLVGNKSDLRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDES--ESGGSS 178
TE+AK FA + L F+ETSA +++NVELAF +LTEIYRIVS KAL + D GG++
Sbjct: 134 TEEAKAFASENHLSFIETSAFDASNVELAFQNILTEIYRIVSSKALDSGDAQAIPQGGTT 193
Query: 179 SLLKAT 184
L T
Sbjct: 194 IPLSKT 199
>gi|357121701|ref|XP_003562556.1| PREDICTED: ras-related protein RABA2a-like [Brachypodium
distachyon]
Length = 221
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 120/170 (70%), Positives = 145/170 (85%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++ FSLDSK+TIGVEF T+T+ + K +KAQIWDTAGQERYRA
Sbjct: 23 LIGDSGVGKSNLLSRFTKNTFSLDSKSTIGVEFATRTIEVEGKTIKAQIWDTAGQERYRA 82
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+TK +FDNV RWL+ELR HAD NI+IML+GNK DL+ LR+V
Sbjct: 83 ITSAYYRGAVGALLVYDVTKGATFDNVKRWLKELRDHADSNIVIMLIGNKMDLKHLRSVA 142
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND 170
EDA FAE+EGL F+ETSAL++TNV+ AF TVL EIYRI+SKKAL+ +D
Sbjct: 143 QEDAASFAEREGLSFIETSALDATNVDRAFQTVLGEIYRIISKKALSTDD 192
>gi|116787388|gb|ABK24490.1| unknown [Picea sitchensis]
gi|116789079|gb|ABK25109.1| unknown [Picea sitchensis]
Length = 216
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 129/206 (62%), Positives = 160/206 (77%), Gaps = 6/206 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKMIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDIT+ +F+NV RWL+ELR H + NI++MLVGNKSDL LRAV
Sbjct: 77 ITSAYYRGAVGALLVYDITRHVTFENVERWLKELRDHTEHNIVVMLVGNKSDLRHLRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA+ FAE+EGL F+ETSALESTNVE AF VLT+IYRIVSKKAL D SE ++
Sbjct: 137 TEDAQTFAEREGLYFIETSALESTNVENAFKQVLTQIYRIVSKKAL---DVSEDNAAAPP 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
T + ++ + + CC++S
Sbjct: 194 QGQT---INVKDDVTATKKVGCCSTS 216
>gi|255562484|ref|XP_002522248.1| protein with unknown function [Ricinus communis]
gi|223538501|gb|EEF40106.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 126/205 (61%), Positives = 156/205 (76%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T++L + K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL ELR H D NI++ML+GNKSDL L AV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED K FAE+E L FMETSALE+TNV+ AF VLT+IYRIVSKKA+ DE G++S
Sbjct: 138 TEDGKSFAERESLYFMETSALEATNVDNAFAEVLTQIYRIVSKKAMETGDE----GAASA 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ + + + S + CC+S
Sbjct: 194 VPSKGEKIDVSKDVSAMKRVGCCSS 218
>gi|226492597|ref|NP_001140635.1| uncharacterized protein LOC100272710 [Zea mays]
gi|194700274|gb|ACF84221.1| unknown [Zea mays]
Length = 216
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 126/205 (61%), Positives = 156/205 (76%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYD+T+ +F+NV RW+ ELR H D NI+IMLVGNK+DL LRAVP
Sbjct: 77 ITSAYYRGAVGALVVYDVTRHVTFENVERWMRELRDHTDANIVIMLVGNKADLRHLRAVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAK FAE+E FMETSALE+ NVE AF VLT+IY +VSKKAL D+ ++
Sbjct: 137 TEDAKAFAERENAFFMETSALEAMNVEGAFTEVLTQIYHVVSKKALDIGDD-----PAAP 191
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ I V G++ S + CC+S
Sbjct: 192 PRGQTISVGGKDDVSAVKKSACCSS 216
>gi|255554684|ref|XP_002518380.1| protein with unknown function [Ricinus communis]
gi|223542475|gb|EEF44016.1| protein with unknown function [Ricinus communis]
Length = 215
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 129/205 (62%), Positives = 157/205 (76%), Gaps = 7/205 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELRGH D NI+IMLVGNK+DL LRAV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDANIVIMLVGNKADLRHLRAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAK FAE+E FMETSALES NVE AF VLT+IYR+VS+KAL D+ +L
Sbjct: 138 TEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEVGDD-----PGAL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V ++ S + CC++
Sbjct: 193 PKGQTINV--KDDVSAVKKVGCCSA 215
>gi|225449350|ref|XP_002282090.1| PREDICTED: ras-related protein Rab2BV [Vitis vinifera]
Length = 215
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 129/205 (62%), Positives = 155/205 (75%), Gaps = 6/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+TL + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITKRQ+F+NV RWL ELR HAD NI+IM+ GNKSDL LRAV
Sbjct: 77 ITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIMMAGNKSDLNHLRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
+DA+ AEKEGL F+ETSALE+ NVE AF T+L +IY I+SKKAL A + S +L
Sbjct: 137 GDDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAA----QEAASINL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
T I V +R+ CC++
Sbjct: 193 PHGTTINVGDLSGNMNKRT--CCST 215
>gi|443733114|gb|ELU17603.1| hypothetical protein CAPTEDRAFT_226009 [Capitella teleta]
Length = 214
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 125/203 (61%), Positives = 157/203 (77%), Gaps = 4/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK FAEK L F+ETSAL+STNVE AF +LTEIY+IVS+K + + + E+ S+++
Sbjct: 136 TDEAKAFAEKNNLSFIETSALDSTNVETAFQNILTEIYKIVSQKQIRDSPDDENSPSNNV 195
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
T V P S + CC
Sbjct: 196 QTIT--VAPTD--NSADKKQKCC 214
>gi|255585255|ref|XP_002533328.1| protein with unknown function [Ricinus communis]
gi|223526833|gb|EEF29049.1| protein with unknown function [Ricinus communis]
Length = 231
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 125/195 (64%), Positives = 153/195 (78%), Gaps = 1/195 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGK+QLL+RF ++EF DSK+TIGVEFQT+T+ I K VKAQIWDTAGQERYRA
Sbjct: 25 VIGDSAVGKTQLLSRFTKNEFCFDSKSTIGVEFQTRTVTIKGKVVKAQIWDTAGQERYRA 84
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA+GAMLVYDITKR +FD+VARW+EELR HAD +I+I L+GNK+DL RAVP
Sbjct: 85 VTSAYYRGALGAMLVYDITKRATFDHVARWVEELRAHADNSIVITLIGNKADLVDQRAVP 144
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA EFAE +GL F ETSAL NV+ AF +L EIY ++SKK+L +G S +
Sbjct: 145 TEDAVEFAEDQGLFFSETSALSGDNVDRAFFRLLEEIYGVISKKSLECGGHKTNGADSVM 204
Query: 181 LKATNI-VVPGQEPE 194
L+ + I V+ G + E
Sbjct: 205 LRGSKIDVISGSDLE 219
>gi|225708490|gb|ACO10091.1| Ras-related protein Rab-11A [Osmerus mordax]
Length = 216
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 124/203 (61%), Positives = 159/203 (78%), Gaps = 5/203 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVESKTVKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++N RWL+EL+ HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK FAEK GL F+ETSAL+S+NVELAF T+LT IY IVS++ ++ +++ SS++
Sbjct: 136 TDEAKAFAEKHGLSFLETSALDSSNVELAFQTILTAIYNIVSQRQMSGRSDADFSPSSNV 195
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ T V P Q + + CC
Sbjct: 196 VPIT--VQPTQ---NASKQGACC 213
>gi|224101065|ref|XP_002312127.1| predicted protein [Populus trichocarpa]
gi|222851947|gb|EEE89494.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 157/205 (76%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+TL + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITKRQ+FDNV RWL ELR HAD NI+IML GNK+DL LR+V
Sbjct: 77 ITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMLAGNKTDLNHLRSVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
EDA+ AEKE L +ETSALE++NVE AF T+L +IY+I+SKKAL A E+ S+ L
Sbjct: 137 AEDAQMLAEKECLSCLETSALEASNVEKAFQTILLDIYQIISKKALAA---QEAANSTGL 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ T I + +++ CC++
Sbjct: 194 PQGTTINIGNLSTNINKKA--CCSN 216
>gi|149689184|gb|ABR27957.1| putative rab11 [Triatoma infestans]
Length = 215
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 128/207 (61%), Positives = 157/207 (75%), Gaps = 12/207 (5%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++V+ K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIVVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL ELR HAD+NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK FAE+ L F+ETSAL+STNVE AF +LTEIYRIVS K + E E+
Sbjct: 136 TDEAKNFAERNALSFIETSALDSTNVETAFQNILTEIYRIVSXKQIRDPPEGET------ 189
Query: 181 LKATNI----VVPGQEPESGRRSYNCC 203
++ N+ V P ES R+ CC
Sbjct: 190 IRPQNVEAIDVKPTVNTESVRKQ--CC 214
>gi|308494106|ref|XP_003109242.1| CRE-RAB-11.1 protein [Caenorhabditis remanei]
gi|308246655|gb|EFO90607.1| CRE-RAB-11.1 protein [Caenorhabditis remanei]
Length = 211
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 157/205 (76%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD+NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK +AE+ L F+ETSAL+STNVE AF +LTEIY+ VS K + + + GGS ++
Sbjct: 136 TDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHVGTDRQGYGGGSGTI 195
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ A P EP + CC S
Sbjct: 196 IPA-----PPTEPPKKQ----CCNS 211
>gi|367054586|ref|XP_003657671.1| hypothetical protein THITE_2123570 [Thielavia terrestris NRRL 8126]
gi|347004937|gb|AEO71335.1| hypothetical protein THITE_2123570 [Thielavia terrestris NRRL 8126]
Length = 213
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 128/205 (62%), Positives = 158/205 (77%), Gaps = 7/205 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ I +K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQIDNKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K SF+NV RWL+ELR HAD NI+IMLVGNK+D LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDISKSLSFENVTRWLKELRDHADSNIVIMLVGNKTDQRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED K FA + GL F+ETSALE+TNV+LAF +LT IY+IVS K+L A + ++ G
Sbjct: 134 TEDGKNFASENGLSFIETSALEATNVDLAFQNILTSIYQIVSSKSL-AEEGADVGKKFDP 192
Query: 181 LKATNIVVPGQEPESGRR--SYNCC 203
+ NI + + GR+ S CC
Sbjct: 193 REGNNITL----SQEGRKEESKTCC 213
>gi|164427985|ref|XP_956972.2| GTP-binding protein ypt3 [Neurospora crassa OR74A]
gi|18376163|emb|CAD21237.1| probable GTP-binding protein Drab11 [Neurospora crassa]
gi|157071962|gb|EAA27736.2| GTP-binding protein ypt3 [Neurospora crassa OR74A]
gi|336468176|gb|EGO56339.1| hypothetical protein NEUTE1DRAFT_130332 [Neurospora tetrasperma
FGSC 2508]
gi|350289578|gb|EGZ70803.1| putative GTP-binding protein Drab11 [Neurospora tetrasperma FGSC
2509]
Length = 214
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 122/180 (67%), Positives = 148/180 (82%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K +F+NV RWL+ELR HAD+NI+IMLVGNKSDL LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDISKGVTFENVNRWLKELRDHADQNIVIMLVGNKSDLRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAK+FAE+ L F+ETSAL++TNVELAF +LTEIY+IVS K + G +L
Sbjct: 134 TEDAKKFAEENHLSFIETSALDATNVELAFQNILTEIYKIVSTKNFDNGPSGSNEGHQNL 193
>gi|293331631|ref|NP_001167800.1| uncharacterized protein LOC100381498 [Zea mays]
gi|297609251|ref|NP_001062887.2| Os09g0327100 [Oryza sativa Japonica Group]
gi|242048968|ref|XP_002462228.1| hypothetical protein SORBIDRAFT_02g022140 [Sorghum bicolor]
gi|48716902|dbj|BAD23597.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|125563251|gb|EAZ08631.1| hypothetical protein OsI_30905 [Oryza sativa Indica Group]
gi|125605234|gb|EAZ44270.1| hypothetical protein OsJ_28889 [Oryza sativa Japonica Group]
gi|215701082|dbj|BAG92506.1| unnamed protein product [Oryza sativa Japonica Group]
gi|223944061|gb|ACN26114.1| unknown [Zea mays]
gi|241925605|gb|EER98749.1| hypothetical protein SORBIDRAFT_02g022140 [Sorghum bicolor]
gi|255678786|dbj|BAF24801.2| Os09g0327100 [Oryza sativa Japonica Group]
Length = 216
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 156/205 (76%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYD+T+ +F+NV RWL+ELR H D NI+IMLVGNK+DL LRAV
Sbjct: 77 ITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRHLRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
EDAK FAE+E FMETSALES NVE AF VLT+IYR+VSKKAL D+ ++
Sbjct: 137 VEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKKALDIGDD-----PAAP 191
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ I V G++ S + CC+S
Sbjct: 192 PRGQTINVGGKDDVSAVKKSGCCSS 216
>gi|225443742|ref|XP_002268815.1| PREDICTED: ras-related protein RABA1d [Vitis vinifera]
Length = 218
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 126/205 (61%), Positives = 159/205 (77%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T++L + K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL ELR H D NI++ML+GNKSDL L AV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED K FAE+E L FMETSALE+TNV+ AF VLT+IYRIVSKKA+ A D+ G +S++
Sbjct: 138 TEDGKSFAERESLYFMETSALEATNVDNAFAEVLTQIYRIVSKKAMEAGDD---GAASAV 194
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ G++ + +R CC++
Sbjct: 195 PSKGEKIDVGKDVSAMKR-VGCCSN 218
>gi|388506820|gb|AFK41476.1| unknown [Lotus japonicus]
Length = 216
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 126/205 (61%), Positives = 157/205 (76%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+TL + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVY +TKRQ+F+NV RWL ELR HAD NI+IM+ GNKSDL LRAV
Sbjct: 77 ITSAYYRGAVGALLVYGMTKRQTFENVQRWLRELRDHADANIVIMMAGNKSDLNHLRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
+EDA+ AEKE L F+ETSALE+ NVE AF T+L +IY+I+S+KAL A E+ ++SL
Sbjct: 137 SEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRKALAAQ---EAASTTSL 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
T I V +++ CC++
Sbjct: 194 PHGTTINVSNLSSNVEKKT--CCSN 216
>gi|171688708|ref|XP_001909294.1| hypothetical protein [Podospora anserina S mat+]
gi|170944316|emb|CAP70426.1| unnamed protein product [Podospora anserina S mat+]
Length = 211
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 127/207 (61%), Positives = 156/207 (75%), Gaps = 13/207 (6%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + +K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDISKNITYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND----ESESGG 176
T+DAK FA + L F+ETSAL++TNVELAF +LTEIY IVS K+ D + GG
Sbjct: 134 TDDAKNFAAENHLSFIETSALDATNVELAFQNILTEIYNIVSTKSFAEEDGKKFDPREGG 193
Query: 177 SSSLLKATNIVVPGQEPESGRRSYNCC 203
TNI + + P+ S CC
Sbjct: 194 -------TNITLSQEGPKG--ESKGCC 211
>gi|443899278|dbj|GAC76609.1| M-phase inducer phosphatase [Pseudozyma antarctica T-34]
Length = 431
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 126/205 (61%), Positives = 154/205 (75%), Gaps = 8/205 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS GKS LL+RF R+EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 233 LIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKAQIWDTAGQERYRA 292
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K ++ NV+RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 293 ITSAYYRGAVGALLVYDIAKHPTYVNVSRWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 352
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDE--SESGGSS 178
T++AK FA + L F+ETSAL+++NVE AF +LTEIYRIVS KAL ++D+ SGG
Sbjct: 353 TDEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYRIVSNKALQSSDDVIKPSGGE- 411
Query: 179 SLLKATNIVVPGQEPESGRRSYNCC 203
T V P + + CC
Sbjct: 412 -----TITVQPSADDGGATKKNGCC 431
>gi|170035713|ref|XP_001845712.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167878018|gb|EDS41401.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 215
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 127/203 (62%), Positives = 153/203 (75%), Gaps = 4/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL ELR HAD+NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK FAE+ GL F+ETSAL+STNVE AF +LTEIYRIVS+K + E GS
Sbjct: 136 TDEAKGFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPE----GSVIR 191
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
NI V P + CC
Sbjct: 192 PNLENIDVKPTNPTTDSVRKQCC 214
>gi|347972127|ref|XP_001238828.3| AGAP004559-PA [Anopheles gambiae str. PEST]
gi|347972129|ref|XP_001238827.3| AGAP004559-PB [Anopheles gambiae str. PEST]
gi|347972131|ref|XP_001238825.3| AGAP004559-PC [Anopheles gambiae str. PEST]
gi|347972133|ref|XP_313857.3| AGAP004559-PD [Anopheles gambiae str. PEST]
gi|347972135|ref|XP_003436840.1| AGAP004559-PE [Anopheles gambiae str. PEST]
gi|347972137|ref|XP_003436841.1| AGAP004559-PF [Anopheles gambiae str. PEST]
gi|347972139|ref|XP_003436842.1| AGAP004559-PG [Anopheles gambiae str. PEST]
gi|347972141|ref|XP_003436843.1| AGAP004559-PH [Anopheles gambiae str. PEST]
gi|347972143|ref|XP_003436844.1| AGAP004559-PI [Anopheles gambiae str. PEST]
gi|347972145|ref|XP_003436845.1| AGAP004559-PJ [Anopheles gambiae str. PEST]
gi|347972147|ref|XP_003436846.1| AGAP004559-PK [Anopheles gambiae str. PEST]
gi|333469183|gb|EAU76889.3| AGAP004559-PA [Anopheles gambiae str. PEST]
gi|333469184|gb|EAU76888.3| AGAP004559-PB [Anopheles gambiae str. PEST]
gi|333469185|gb|EAU76886.3| AGAP004559-PC [Anopheles gambiae str. PEST]
gi|333469186|gb|EAA44610.3| AGAP004559-PD [Anopheles gambiae str. PEST]
gi|333469187|gb|EGK97198.1| AGAP004559-PE [Anopheles gambiae str. PEST]
gi|333469188|gb|EGK97199.1| AGAP004559-PF [Anopheles gambiae str. PEST]
gi|333469189|gb|EGK97200.1| AGAP004559-PG [Anopheles gambiae str. PEST]
gi|333469190|gb|EGK97201.1| AGAP004559-PH [Anopheles gambiae str. PEST]
gi|333469191|gb|EGK97202.1| AGAP004559-PI [Anopheles gambiae str. PEST]
gi|333469192|gb|EGK97203.1| AGAP004559-PJ [Anopheles gambiae str. PEST]
gi|333469193|gb|EGK97204.1| AGAP004559-PK [Anopheles gambiae str. PEST]
Length = 215
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 127/203 (62%), Positives = 153/203 (75%), Gaps = 4/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL ELR HAD+NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK FAE+ GL F+ETSAL+STNVE AF +LTEIYRIVS+K + E GS
Sbjct: 136 TDEAKGFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPE----GSVIR 191
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
NI V P + CC
Sbjct: 192 PNLENIDVKPTNPTTDSVRKQCC 214
>gi|380017257|ref|XP_003692576.1| PREDICTED: ras-related protein Rab-11A-like [Apis florea]
Length = 215
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 127/207 (61%), Positives = 157/207 (75%), Gaps = 12/207 (5%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL ELR HAD+NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK FAEK GL F+ETSAL+STNVE AF +LTEIYRIVS+K + E ++
Sbjct: 136 TDEAKAFAEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPEGDT------ 189
Query: 181 LKATNI----VVPGQEPESGRRSYNCC 203
++ N+ V P E R+ CC
Sbjct: 190 IRPQNVEPIDVKPTMNSEGMRKQ--CC 214
>gi|157122009|ref|XP_001659918.1| rab11 [Aedes aegypti]
gi|94469128|gb|ABF18413.1| RAB family GTPase [Aedes aegypti]
gi|108874607|gb|EAT38832.1| AAEL009317-PA [Aedes aegypti]
Length = 215
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 127/203 (62%), Positives = 153/203 (75%), Gaps = 4/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL ELR HAD+NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK FAE+ GL F+ETSAL+STNVE AF +LTEIYRIVS+K + E GS
Sbjct: 136 TDEAKGFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPE----GSVIR 191
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
NI V P + CC
Sbjct: 192 PNLENIDVKPTNPATDSVRKQCC 214
>gi|452824501|gb|EME31503.1| Rab family, other [Galdieria sulphuraria]
Length = 215
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 128/204 (62%), Positives = 155/204 (75%), Gaps = 4/204 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF TK++ K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVQTEGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K++SF V +WL+ELR HAD NI+IMLVGNKSDL+ LRAV
Sbjct: 76 ITSAYYRGAVGALLVYDISKKESFIGVEKWLKELRDHADSNIVIMLVGNKSDLKHLRAVS 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+ KEFAEK L F+ETSAL++TNVE AF +LTEIYRIV KKALT +E S
Sbjct: 136 TEEGKEFAEKHSLSFIETSALDATNVEQAFTQLLTEIYRIVHKKALT----NEKNPSFKP 191
Query: 181 LKATNIVVPGQEPESGRRSYNCCT 204
++VV + G CC+
Sbjct: 192 ALGESVVVRDPAEDKGTHKKKCCS 215
>gi|414885034|tpg|DAA61048.1| TPA: hypothetical protein ZEAMMB73_722788 [Zea mays]
Length = 323
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 156/205 (76%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 124 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRA 183
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYD+T+ +F+NV RWL+ELR H D NI+IMLVGNK+DL LRAV
Sbjct: 184 ITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRHLRAVS 243
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
EDAK FAE+E FMETSALES NVE AF VLT+IYR+VSKKAL D+ ++
Sbjct: 244 VEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKKALDIGDD-----PAAP 298
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ I V G++ S + CC+S
Sbjct: 299 PRGQTINVGGKDDVSAVKKSGCCSS 323
>gi|156551916|ref|XP_001607057.1| PREDICTED: ras-related protein Rab-11A-like [Nasonia vitripennis]
Length = 215
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 127/207 (61%), Positives = 157/207 (75%), Gaps = 12/207 (5%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL ELR HAD+NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK FAEK GL F+ETSAL+STNVE AF +LTEIYRIVS+K + E ++
Sbjct: 136 TDEAKTFAEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPEGDT------ 189
Query: 181 LKATNI----VVPGQEPESGRRSYNCC 203
++ N+ V P E R+ CC
Sbjct: 190 IRPQNVEPIDVKPTMSSEGMRKQ--CC 214
>gi|224116798|ref|XP_002317396.1| predicted protein [Populus trichocarpa]
gi|222860461|gb|EEE98008.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 128/205 (62%), Positives = 155/205 (75%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T++L + K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL ELR H D NI++ML+GNKSDL L AV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED K FAE+E L FMETSALE+TNV+ AF VLT+IYRIVSKKA+ DE+ + S
Sbjct: 138 TEDGKSFAERESLYFMETSALEATNVDSAFAEVLTQIYRIVSKKAMETGDEAAASAVPS- 196
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V + S + CC+S
Sbjct: 197 -KGEKIDVS--KDVSAMKRVGCCSS 218
>gi|348527514|ref|XP_003451264.1| PREDICTED: ras-related protein Rab-11A-like [Oreochromis niloticus]
Length = 216
Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 124/207 (59%), Positives = 159/207 (76%), Gaps = 7/207 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++N RWL+EL+ HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK FAEK GL F+ETSAL+S+NVELAF T+LT IY IVS++ ++ +S+
Sbjct: 136 TDEAKAFAEKHGLSFLETSALDSSNVELAFQTILTAIYNIVSQRQMSGRSDSD------F 189
Query: 181 LKATNIVVPGQEP-ESGRRSYNCCTSS 206
A+N+V EP ++ CC S+
Sbjct: 190 SPASNVVPITVEPTQNSSNKGACCQSN 216
>gi|449456603|ref|XP_004146038.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|449510339|ref|XP_004163637.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|307135941|gb|ADN33802.1| GTP-binding protein [Cucumis melo subsp. melo]
Length = 217
Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 156/205 (76%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D NI+IMLVGNK+DL LRAV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA+ FAEKE FMETSALES NVE AF VLT+IYR+V +KAL ++ ++L
Sbjct: 138 TEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGED-----PAAL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V ++ S + CC+S
Sbjct: 193 PKGQTINVGNKDDVSAMKKVGCCSS 217
>gi|267527|sp|Q01111.1|YPT3_NICPL RecName: Full=Ras-related protein YPT3
gi|19715|emb|CAA45351.1| Np-ypt3 [Nicotiana plumbaginifolia]
Length = 218
Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 159/205 (77%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EF+L+SK+TIGVEF TK+L I +K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNKVIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +++NV RWL+ELR H D NI++ML+GNKSDL L AV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIVVMLIGNKSDLRHLVAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK AE+EGL FMETSALE+TNVE AF LT+IYRIVSKKA+ A DE + +
Sbjct: 138 TDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSKKAVEAGDEGATSSAPPK 197
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ NI ++ S + + CC+S
Sbjct: 198 GETINI----KDEGSSWKKFGCCSS 218
>gi|15239462|ref|NP_200894.1| RAB GTPase homolog A1F [Arabidopsis thaliana]
gi|75171043|sp|Q9FJH0.1|RAA1F_ARATH RecName: Full=Ras-related protein RABA1f; Short=AtRABA1f
gi|10176913|dbj|BAB10106.1| GTP-binding protein, ras-like [Arabidopsis thaliana]
gi|26452359|dbj|BAC43265.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|28950757|gb|AAO63302.1| At5g60860 [Arabidopsis thaliana]
gi|332010004|gb|AED97387.1| RAB GTPase homolog A1F [Arabidopsis thaliana]
Length = 217
Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 126/205 (61%), Positives = 156/205 (76%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D NI+IM VGNK+DL LRAV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGNKADLRHLRAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAK FAE+E FMETSALES NVE AF VL++IYR+VS+KAL D+ ++L
Sbjct: 138 TEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIGDD-----PAAL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V ++ S + CC++
Sbjct: 193 PKGQTINVGSKDDVSAVKKVGCCSN 217
>gi|405120692|gb|AFR95462.1| GTPase [Cryptococcus neoformans var. grubii H99]
Length = 213
Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 159/205 (77%), Gaps = 8/205 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 15 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL+ LRAV
Sbjct: 75 ITSAYYRGAVGALLVYDIAKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLKHLRAVS 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDE--SESGGSS 178
T++AK+FA + GL F+ETSAL+++NVE AF +LT+IYRIVS K+L ++ + SGG
Sbjct: 135 TDEAKQFATENGLSFIETSALDASNVESAFQNILTDIYRIVSSKSLESSGDVIKPSGGE- 193
Query: 179 SLLKATNIVVPGQEPESGRRSYNCC 203
T +V P + + S CC
Sbjct: 194 -----TILVAPTADDGGAKSSSKCC 213
>gi|357158024|ref|XP_003577992.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 126/205 (61%), Positives = 156/205 (76%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYD+T+ +F+NV RWL+ELR H D NI+IMLVGNK+DL LRAV
Sbjct: 77 ITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRHLRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
EDAK FAE+E FMETSALE+ NVE AF VLT+IYR+VSKKAL D+ ++
Sbjct: 137 VEDAKAFAERESTFFMETSALEAMNVESAFTEVLTQIYRVVSKKALDIGDD-----PAAP 191
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ I V G++ S + CC+S
Sbjct: 192 PRGQTINVGGKDDVSAVKKAGCCSS 216
>gi|49333384|gb|AAT64023.1| putative GTP-binding protein [Gossypium hirsutum]
Length = 218
Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 159/205 (77%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T++L + K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL ELR H D NI++MLVGNKSDL L AV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDLRHLVAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED K FAEKE L FMETSALE+TNVE++F VLT+IY ++SKKA+ +D+ G +S++
Sbjct: 138 TEDGKSFAEKESLYFMETSALEATNVEISFAEVLTQIYNVISKKAMETSDD---GAASAV 194
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ G++ + ++ CC+S
Sbjct: 195 PSKGEKIDVGKDVSAMKKG-GCCSS 218
>gi|115465467|ref|NP_001056333.1| Os05g0564400 [Oryza sativa Japonica Group]
gi|50511479|gb|AAT77401.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113579884|dbj|BAF18247.1| Os05g0564400 [Oryza sativa Japonica Group]
gi|215706418|dbj|BAG93274.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766623|dbj|BAG98685.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632570|gb|EEE64702.1| hypothetical protein OsJ_19557 [Oryza sativa Japonica Group]
Length = 217
Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 127/206 (61%), Positives = 156/206 (75%), Gaps = 5/206 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYD+T+ +F+NV RW+ EL+ H D NI+IMLVGNK+DL LRAV
Sbjct: 77 ITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGNKADLRHLRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAK FAEKE FMETSALES NVE AF VLT+IY +VSKKAL D+ ++
Sbjct: 137 TEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKKALDIGDD-----PAAP 191
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
K I V G++ S + CC+S+
Sbjct: 192 PKGQTINVGGKDDVSAVKKSACCSSA 217
>gi|428174833|gb|EKX43726.1| hypothetical protein GUITHDRAFT_159767 [Guillardia theta CCMP2712]
Length = 218
Score = 255 bits (652), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 126/206 (61%), Positives = 160/206 (77%), Gaps = 4/206 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 15 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +F+NV RWL+ELR HAD NI+IMLVGNKSDL LRAV
Sbjct: 75 ITSAYYRGAVGALLVYDIAKHVTFENVDRWLKELRDHADHNIVIMLVGNKSDLRHLRAVA 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T+DA+ +AE+ L F+ETSAL+STNVE AF T+LTEIYR+VS++ + A ESG S S+
Sbjct: 135 TDDARGYAEQRNLSFIETSALDSTNVEQAFQTILTEIYRLVSRRPMEAG---ESGDSPSV 191
Query: 181 LKATNIVVPGQ-EPESGRRSYNCCTS 205
+ ++V + E ++ R C S
Sbjct: 192 GQGEKVIVSREDETKAAERKSKCSGS 217
>gi|187607443|ref|NP_001120303.1| uncharacterized protein LOC100145363 [Xenopus (Silurana)
tropicalis]
gi|156914717|gb|AAI52631.1| Zgc:92772 protein [Danio rerio]
gi|169642085|gb|AAI60799.1| LOC100145363 protein [Xenopus (Silurana) tropicalis]
Length = 218
Score = 255 bits (652), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 125/203 (61%), Positives = 152/203 (74%), Gaps = 3/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + E + G S
Sbjct: 136 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---ERSAHGESPG 192
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+I VP CC
Sbjct: 193 NNVVDISVPPTTDGQKSNKLQCC 215
>gi|6679583|ref|NP_033023.1| ras-related protein Rab-11B [Mus musculus]
gi|1172815|sp|P46638.3|RB11B_MOUSE RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|433064|gb|AAC42093.1| Rab11b [Mus musculus]
gi|27502091|gb|AAO17377.1| RAB11B protein [Mus musculus]
gi|32493335|gb|AAH54753.1| RAB11B, member RAS oncogene family [Mus musculus]
gi|55391484|gb|AAH85270.1| RAB11B, member RAS oncogene family [Mus musculus]
gi|74138737|dbj|BAE27183.1| unnamed protein product [Mus musculus]
gi|74138750|dbj|BAE27188.1| unnamed protein product [Mus musculus]
gi|74144654|dbj|BAE27312.1| unnamed protein product [Mus musculus]
gi|74147424|dbj|BAE27582.1| unnamed protein product [Mus musculus]
gi|74151060|dbj|BAE27658.1| unnamed protein product [Mus musculus]
gi|74195098|dbj|BAE28293.1| unnamed protein product [Mus musculus]
gi|74195236|dbj|BAE28347.1| unnamed protein product [Mus musculus]
gi|112292981|dbj|BAF02868.1| Rab11B [Mus musculus]
gi|148678259|gb|EDL10206.1| mCG22989, isoform CRA_b [Mus musculus]
gi|187957168|gb|AAI57917.1| RAB11B, member RAS oncogene family [Mus musculus]
Length = 218
Score = 255 bits (652), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 130/212 (61%), Positives = 157/212 (74%), Gaps = 17/212 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + A+DES
Sbjct: 136 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGNN- 194
Query: 178 SSLLKATNIVVP----GQEPESGRRSYNCCTS 205
+I VP GQ P CC S
Sbjct: 195 -----VVDISVPPTTDGQRPN----KLQCCQS 217
>gi|328778735|ref|XP_623997.2| PREDICTED: ras-related protein Rab-11A [Apis mellifera]
Length = 249
Score = 255 bits (652), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 127/207 (61%), Positives = 157/207 (75%), Gaps = 12/207 (5%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 50 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 109
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL ELR HAD+NI+IMLVGNKSDL LRAVP
Sbjct: 110 ITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 169
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK FAEK GL F+ETSAL+STNVE AF +LTEIYRIVS+K + E ++
Sbjct: 170 TDEAKAFAEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPEGDT------ 223
Query: 181 LKATNI----VVPGQEPESGRRSYNCC 203
++ N+ V P E R+ CC
Sbjct: 224 IRPQNVEPIDVKPTMNSEGMRKQ--CC 248
>gi|281342864|gb|EFB18448.1| hypothetical protein PANDA_018338 [Ailuropoda melanoleuca]
Length = 204
Score = 255 bits (652), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 129/210 (61%), Positives = 157/210 (74%), Gaps = 17/210 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 4 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 63
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 64 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 123
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + A+DES
Sbjct: 124 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGNN- 182
Query: 178 SSLLKATNIVVP----GQEPESGRRSYNCC 203
+I VP GQ+P CC
Sbjct: 183 -----VVDISVPPTTDGQKPN----KLQCC 203
>gi|417408648|gb|JAA50866.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 205
Score = 255 bits (651), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 129/210 (61%), Positives = 157/210 (74%), Gaps = 17/210 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 3 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 62
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 63 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 122
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + A+DES
Sbjct: 123 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGNN- 181
Query: 178 SSLLKATNIVVP----GQEPESGRRSYNCC 203
+I VP GQ+P CC
Sbjct: 182 -----VVDISVPPTTDGQKPN----KLQCC 202
>gi|224105831|ref|XP_002333760.1| predicted protein [Populus trichocarpa]
gi|222838434|gb|EEE76799.1| predicted protein [Populus trichocarpa]
Length = 151
Score = 255 bits (651), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 125/152 (82%), Positives = 137/152 (90%), Gaps = 1/152 (0%)
Query: 55 QERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLE 114
Q RYRAVTSAYYRGAVGAMLVYDITKRQSFD+VA+WLEELR HAD NI+IML+GNKSDL
Sbjct: 1 QFRYRAVTSAYYRGAVGAMLVYDITKRQSFDHVAKWLEELRDHADNNIVIMLIGNKSDLG 60
Query: 115 TLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESES 174
TLRAVPTEDAKEFA+KE L FMETSALE+TNVE AFL+VLTEIYR++SKKAL AN E ES
Sbjct: 61 TLRAVPTEDAKEFAQKENLFFMETSALEATNVESAFLSVLTEIYRVISKKALIAN-EQES 119
Query: 175 GGSSSLLKATNIVVPGQEPESGRRSYNCCTSS 206
GGSSSLLK TNIVVP QEP SG RS++CC +S
Sbjct: 120 GGSSSLLKGTNIVVPEQEPVSGGRSFSCCGTS 151
>gi|188509957|gb|ACD56641.1| putative GTP-binding protein [Gossypioides kirkii]
Length = 218
Score = 255 bits (651), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 159/205 (77%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T++L + K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL ELR H D NI++MLVGNKSDL L AV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDLRHLVAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED K FAEKE L FMETSALE+TNVE+AF VLT++Y +VSKKA+ +D+ G +S++
Sbjct: 138 TEDGKSFAEKESLYFMETSALEATNVEIAFAEVLTQVYNVVSKKAMETSDD---GAASAV 194
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ G++ + ++ CC+S
Sbjct: 195 PSKGEKIDVGKDVSAMKKG-GCCSS 218
>gi|326497829|dbj|BAJ94777.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326501616|dbj|BAK02597.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 255 bits (651), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 126/205 (61%), Positives = 156/205 (76%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYD+T+ +F+NV RWL+ELR H D NI+IMLVGNK+DL LRAV
Sbjct: 77 ITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRHLRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
EDAK FAE+E FMETSALE+ NVE AF VLT+IYR+VSKKAL D+ ++
Sbjct: 137 VEDAKAFAERESTFFMETSALEAMNVENAFTEVLTQIYRVVSKKALDIGDD-----PAAP 191
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ I V G++ S + CC+S
Sbjct: 192 PRGQTINVGGKDDVSAVKKAGCCSS 216
>gi|355714809|gb|AES05124.1| RAB11B, member RAS oncoprotein family [Mustela putorius furo]
Length = 204
Score = 255 bits (651), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 129/210 (61%), Positives = 157/210 (74%), Gaps = 17/210 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 2 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 61
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 62 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 121
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + A+DES
Sbjct: 122 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGNN- 180
Query: 178 SSLLKATNIVVP----GQEPESGRRSYNCC 203
+I VP GQ+P CC
Sbjct: 181 -----VVDISVPPTTDGQKPS----KLQCC 201
>gi|15233873|ref|NP_193578.1| RAB GTPase homolog A1E [Arabidopsis thaliana]
gi|297800216|ref|XP_002867992.1| hypothetical protein ARALYDRAFT_493018 [Arabidopsis lyrata subsp.
lyrata]
gi|75098755|sp|O49513.1|RAA1E_ARATH RecName: Full=Ras-related protein RABA1e; Short=AtRABA1e
gi|2832648|emb|CAA16723.1| membrane-bound small GTP-binding - like protein [Arabidopsis
thaliana]
gi|7268636|emb|CAB78845.1| membrane-bound small GTP-binding-like protein [Arabidopsis
thaliana]
gi|38603932|gb|AAR24711.1| At4g18430 [Arabidopsis thaliana]
gi|44681422|gb|AAS47651.1| At4g18430 [Arabidopsis thaliana]
gi|297313828|gb|EFH44251.1| hypothetical protein ARALYDRAFT_493018 [Arabidopsis lyrata subsp.
lyrata]
gi|332658645|gb|AEE84045.1| RAB GTPase homolog A1E [Arabidopsis thaliana]
Length = 217
Score = 255 bits (651), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 121/204 (59%), Positives = 159/204 (77%), Gaps = 5/204 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFS++SK+TIGVEF T+++ + K +KAQ+WDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQLWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDIT+ +F+NV RWL+ELR H D N++IMLVGNK+DL LRAVP
Sbjct: 78 ITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVVIMLVGNKADLRHLRAVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+A+ F+E+E + FMETSAL++TNVE AF VLT+IYR++S+KAL +G SL
Sbjct: 138 TEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSRKALDG-----TGDPMSL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCT 204
K I + ++ + +S CC+
Sbjct: 193 PKGQTIDIGNKDDVTAVKSSGCCS 216
>gi|405960755|gb|EKC26640.1| Ras-related protein Rab-11A [Crassostrea gigas]
Length = 209
Score = 255 bits (651), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 124/204 (60%), Positives = 158/204 (77%), Gaps = 4/204 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 9 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 68
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 69 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVP 128
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK FAEK L F+ETSAL+STNVE AF +LTEIY+IVS+K + + + ++ S+++
Sbjct: 129 TDEAKAFAEKNNLSFIETSALDSTNVETAFQNILTEIYKIVSQKQIRDSPDDDNSPSNNV 188
Query: 181 LKATNIVVPGQEPESGRRSYNCCT 204
T V P + R CC+
Sbjct: 189 --QTIHVAPTD--NAAPRQQKCCS 208
>gi|414885033|tpg|DAA61047.1| TPA: hypothetical protein ZEAMMB73_722788, partial [Zea mays]
Length = 240
Score = 255 bits (651), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 156/205 (76%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 41 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRA 100
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYD+T+ +F+NV RWL+ELR H D NI+IMLVGNK+DL LRAV
Sbjct: 101 ITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRHLRAVS 160
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
EDAK FAE+E FMETSALES NVE AF VLT+IYR+VSKKAL D+ ++
Sbjct: 161 VEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKKALDIGDD-----PAAP 215
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ I V G++ S + CC+S
Sbjct: 216 PRGQTINVGGKDDVSAVKKSGCCSS 240
>gi|432910562|ref|XP_004078415.1| PREDICTED: ras-related protein Rab-11A-like [Oryzias latipes]
Length = 216
Score = 255 bits (651), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 123/204 (60%), Positives = 158/204 (77%), Gaps = 7/204 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++N RWL+EL+ HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAEK GL F+ETSAL+S+NVELAF T+LT IY IVS++ ++ +S+
Sbjct: 136 TDEARAFAEKHGLSFLETSALDSSNVELAFQTILTAIYNIVSQRQMSGRTDSD------F 189
Query: 181 LKATNIVVPGQEP-ESGRRSYNCC 203
A+N+V EP ++ +CC
Sbjct: 190 SPASNVVPISVEPTQTSSSKGSCC 213
>gi|357603306|gb|EHJ63705.1| ras-related GTP-binding protein Rab11 [Danaus plexippus]
Length = 213
Score = 255 bits (651), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 126/209 (60%), Positives = 155/209 (74%), Gaps = 18/209 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K S++NV RWL ELR HAD+NI+IMLVGNKSDL LR++P
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK FAE+ GL F+ETSAL+STNVE AF +LTEIYRIVS+K + E
Sbjct: 136 TEEAKAFAERNGLSFIETSALDSTNVEPAFQNILTEIYRIVSQKQMRDPPEG-------- 187
Query: 181 LKATNIVVPGQEPESGRRS------YNCC 203
+++ P EP R + NCC
Sbjct: 188 ----DVIRPDAEPADVRAAGADAVRRNCC 212
>gi|332028148|gb|EGI68199.1| Ras-related protein Rab-11B [Acromyrmex echinatior]
Length = 219
Score = 255 bits (651), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 126/207 (60%), Positives = 157/207 (75%), Gaps = 12/207 (5%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 20 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL ELR HAD+NI+IMLVGNKSDL LRAVP
Sbjct: 80 ITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK FAE+ GL F+ETSAL+STNVE AF +LTEIYRIVS+K + E ++
Sbjct: 140 TDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPEGDT------ 193
Query: 181 LKATNI----VVPGQEPESGRRSYNCC 203
++ N+ V P E R+ CC
Sbjct: 194 IRPQNVEQIEVKPTMNAEGVRKQ--CC 218
>gi|383854058|ref|XP_003702539.1| PREDICTED: ras-related protein Rab-11A-like [Megachile rotundata]
Length = 238
Score = 255 bits (651), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 126/207 (60%), Positives = 157/207 (75%), Gaps = 12/207 (5%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 39 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 98
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL ELR HAD+NI+IMLVGNKSDL LRAVP
Sbjct: 99 ITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 158
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK FAE+ GL F+ETSAL+STNVE AF +LTEIYRIVS+K + E ++
Sbjct: 159 TDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPEGDT------ 212
Query: 181 LKATNI----VVPGQEPESGRRSYNCC 203
++ N+ V P E R+ CC
Sbjct: 213 IRPQNVEPIDVKPTMNSEGMRKP--CC 237
>gi|334326820|ref|XP_001376337.2| PREDICTED: ras-related protein Rab-11B-like [Monodelphis domestica]
Length = 218
Score = 255 bits (651), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 126/206 (61%), Positives = 154/206 (74%), Gaps = 9/206 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + +A+DES
Sbjct: 136 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRSAHDESPGNN- 194
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCC 203
+I VP CC
Sbjct: 195 -----VVDISVPPTTDGQKSNKLQCC 215
>gi|213408535|ref|XP_002175038.1| GTPase Ypt3 [Schizosaccharomyces japonicus yFS275]
gi|212003085|gb|EEB08745.1| GTPase Ypt3 [Schizosaccharomyces japonicus yFS275]
Length = 214
Score = 255 bits (651), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 124/203 (61%), Positives = 155/203 (76%), Gaps = 3/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL RF R+EF+++SK+TIGVEF T+ +V+ +K +KAQIWDTAGQERYRA
Sbjct: 15 LIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDITK+ SFDNV RWL+ELR HAD NI+IMLVGNK+DL LRAV
Sbjct: 75 ITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELRDHADSNIVIMLVGNKTDLLHLRAVS 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+A+ FA + L F+ETSA++++NVE AF TVLTEI+RIVS +A+ DE G S
Sbjct: 135 TEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRAMEGGDE---GAHPSA 191
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ NI + + S CC
Sbjct: 192 GQTLNIAPTIGDSGKSKSSGQCC 214
>gi|212723418|ref|NP_001131787.1| uncharacterized protein LOC100193158 [Zea mays]
gi|194692530|gb|ACF80349.1| unknown [Zea mays]
gi|414589339|tpg|DAA39910.1| TPA: hypothetical protein ZEAMMB73_058303 [Zea mays]
Length = 216
Score = 255 bits (651), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 156/205 (76%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYD+T+ +F+NV RWL+ELR H D NI+IMLVGNK+DL LRAV
Sbjct: 77 ITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRHLRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
EDAK FAE+E FMETSALES NVE AF VLT+IYR+VSKKAL D+ ++
Sbjct: 137 VEDAKGFAEREMTFFMETSALESMNVESAFTEVLTQIYRVVSKKALDIGDD-----PAAP 191
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ I V G++ S + CC+S
Sbjct: 192 PRGQTINVGGKDDVSAVKKAGCCSS 216
>gi|432855561|ref|XP_004068248.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 255 bits (651), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 128/208 (61%), Positives = 155/208 (74%), Gaps = 9/208 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ETSAL+STNVE AF VLTEIYRIVS+K + +A+DES
Sbjct: 136 TDEARAFAEKNTLSFIETSALDSTNVEEAFKNVLTEIYRIVSQKQIADRSAHDESPGNN- 194
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCCTS 205
+I VP CC S
Sbjct: 195 -----VVDISVPPTSDGQKGNKIQCCQS 217
>gi|392596215|gb|EIW85538.1| GTPase [Coniophora puteana RWD-64-598 SS2]
Length = 211
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 125/203 (61%), Positives = 154/203 (75%), Gaps = 6/203 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+T+ + K VKAQIWDTAGQERYRA
Sbjct: 15 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRTINVDGKTVKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K ++ NV RWL+ELR HAD NI+IMLVGNKSDL+ LRAVP
Sbjct: 75 ITSAYYRGAVGALLVYDIAKHATYANVTRWLKELRDHADANIVIMLVGNKSDLKHLRAVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK FA + L F+ETSAL+++NVE AF T+LT+IYRIVS K L + + +S
Sbjct: 135 TEEAKTFATENELSFIETSALDASNVESAFQTILTDIYRIVSSKTLEQSSDPIKAPTSDT 194
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ + + P SG + CC
Sbjct: 195 IP---VAIDSAAPASGSK---CC 211
>gi|307210968|gb|EFN87269.1| Ras-related protein Rab-11B [Harpegnathos saltator]
Length = 215
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 126/207 (60%), Positives = 157/207 (75%), Gaps = 12/207 (5%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL ELR HAD+NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK FAE+ GL F+ETSAL+STNVE AF +LTEIYRIVS+K + E ++
Sbjct: 136 TDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPEGDT------ 189
Query: 181 LKATNI----VVPGQEPESGRRSYNCC 203
++ N+ V P E R+ CC
Sbjct: 190 IRPQNVEQIEVKPTMNAEGMRKQ--CC 214
>gi|3024504|sp|Q40521.1|RB11B_TOBAC RecName: Full=Ras-related protein Rab11B
gi|623578|gb|AAA74113.1| putative [Nicotiana tabacum]
Length = 217
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 128/205 (62%), Positives = 159/205 (77%), Gaps = 6/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF+R+EF+L+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 19 LIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQERYRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDIT+ +F+NV RWL+ELR H D+NI+IMLVGNK+DL LRAV
Sbjct: 79 ITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGNKADLRHLRAVS 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAK FAE+E FMETSALES NVE AF VLTEIY++V +KAL D+ ++L
Sbjct: 139 TEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRKALEVGDD-----PAAL 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V G++ S + CC+S
Sbjct: 194 PKGQTINV-GKDDVSAVKKVGCCSS 217
>gi|46561764|gb|AAT01087.1| putative rab11 [Homalodisca vitripennis]
Length = 215
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 126/207 (60%), Positives = 159/207 (76%), Gaps = 12/207 (5%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL ELR HAD+NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAE+ GL F+ETSAL+STNVE AF +LTEIYRIVS+K + E ++
Sbjct: 136 TDEARTFAERNGLSFIETSALDSTNVETAFHNILTEIYRIVSQKQIRDPPEGDT------ 189
Query: 181 LKATNI----VVPGQEPESGRRSYNCC 203
++ TN+ V P +S R+ CC
Sbjct: 190 IRPTNVEAIDVKPTVNTDSVRKQ--CC 214
>gi|14249144|ref|NP_116006.1| ras-related protein Rab-11B [Rattus norvegicus]
gi|78369332|ref|NP_001030468.1| ras-related protein Rab-11B [Bos taurus]
gi|190358517|ref|NP_004209.2| ras-related protein Rab-11B [Homo sapiens]
gi|226529709|ref|NP_001142168.1| uncharacterized protein LOC100274335 [Zea mays]
gi|349585085|ref|NP_001231804.1| RAB11B, member RAS oncogene family [Sus scrofa]
gi|387762845|ref|NP_001248413.1| ras-related protein Rab-11B [Macaca mulatta]
gi|297703412|ref|XP_002828633.1| PREDICTED: ras-related protein Rab-11B [Pongo abelii]
gi|332264185|ref|XP_003281127.1| PREDICTED: ras-related protein Rab-11B isoform 1 [Nomascus
leucogenys]
gi|332852540|ref|XP_001147785.2| PREDICTED: ras-related protein Rab-11B [Pan troglodytes]
gi|344299320|ref|XP_003421334.1| PREDICTED: ras-related protein Rab-11B-like [Loxodonta africana]
gi|345786671|ref|XP_854399.2| PREDICTED: ras-related protein Rab-11B [Canis lupus familiaris]
gi|354496877|ref|XP_003510550.1| PREDICTED: ras-related protein Rab-11B-like [Cricetulus griseus]
gi|397477329|ref|XP_003810025.1| PREDICTED: ras-related protein Rab-11B [Pan paniscus]
gi|402904037|ref|XP_003914857.1| PREDICTED: ras-related protein Rab-11B [Papio anubis]
gi|403296089|ref|XP_003938953.1| PREDICTED: ras-related protein Rab-11B [Saimiri boliviensis
boliviensis]
gi|426229069|ref|XP_004008616.1| PREDICTED: ras-related protein Rab-11B [Ovis aries]
gi|426387018|ref|XP_004059975.1| PREDICTED: ras-related protein Rab-11B [Gorilla gorilla gorilla]
gi|38258938|sp|Q15907.4|RB11B_HUMAN RecName: Full=Ras-related protein Rab-11B; AltName:
Full=GTP-binding protein YPT3; Flags: Precursor
gi|50403673|sp|O35509.4|RB11B_RAT RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|108860922|sp|Q3MHP2.3|RB11B_BOVIN RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|9837357|gb|AAG00542.1|AF286534_1 GTP-binding protein RAB11B [Rattus norvegicus]
gi|20379070|gb|AAM21095.1|AF498947_1 small GTP binding protein RAB11B [Homo sapiens]
gi|38303833|gb|AAH62041.1| RAB11B, member RAS oncogene family [Rattus norvegicus]
gi|54695942|gb|AAV38343.1| RAB11B, member RAS oncogene family [Homo sapiens]
gi|61355645|gb|AAX41161.1| RAB11B member RAS oncogene family [synthetic construct]
gi|75773827|gb|AAI05163.1| RAB11B, member RAS oncogene family [Bos taurus]
gi|82414868|gb|AAI10082.1| RAB11B, member RAS oncogene family [Homo sapiens]
gi|90085246|dbj|BAE91364.1| unnamed protein product [Macaca fascicularis]
gi|119589331|gb|EAW68925.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119589333|gb|EAW68927.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|149031659|gb|EDL86622.1| RAB11B, member RAS oncogene family [Rattus norvegicus]
gi|189066581|dbj|BAG35831.1| unnamed protein product [Homo sapiens]
gi|194707448|gb|ACF87808.1| unknown [Zea mays]
gi|296485751|tpg|DAA27866.1| TPA: ras-related protein Rab-11B [Bos taurus]
gi|307686193|dbj|BAJ21027.1| RAB11B, member RAS oncogene family [synthetic construct]
gi|344244036|gb|EGW00140.1| Ras-related protein Rab-11B [Cricetulus griseus]
gi|380817956|gb|AFE80852.1| ras-related protein Rab-11B [Macaca mulatta]
gi|383422851|gb|AFH34639.1| ras-related protein Rab-11B [Macaca mulatta]
gi|385281372|gb|AFI57838.1| ras-related protein Rab-11B [Capra hircus]
gi|410217180|gb|JAA05809.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410217182|gb|JAA05810.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410257678|gb|JAA16806.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410301334|gb|JAA29267.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410337015|gb|JAA37454.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|432104449|gb|ELK31073.1| Ras-related protein Rab-11B [Myotis davidii]
Length = 218
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 129/210 (61%), Positives = 157/210 (74%), Gaps = 17/210 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + A+DES
Sbjct: 136 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGNN- 194
Query: 178 SSLLKATNIVVP----GQEPESGRRSYNCC 203
+I VP GQ+P CC
Sbjct: 195 -----VVDISVPPTTDGQKPN----KLQCC 215
>gi|50540176|ref|NP_001002555.1| ras-related protein Rab-11B [Danio rerio]
gi|326665348|ref|XP_003198017.1| PREDICTED: ras-related protein Rab-11B-like isoform 1 [Danio rerio]
gi|326665350|ref|XP_003198018.1| PREDICTED: ras-related protein Rab-11B-like isoform 2 [Danio rerio]
gi|49904559|gb|AAH76247.1| Zgc:92772 [Danio rerio]
Length = 218
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 126/206 (61%), Positives = 154/206 (74%), Gaps = 9/206 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + +A+DES
Sbjct: 136 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAERSAHDESPGNN- 194
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCC 203
+I VP CC
Sbjct: 195 -----VVDISVPPTTDGQKSNKLQCC 215
>gi|431900156|gb|ELK08070.1| Ras-related protein Rab-11B [Pteropus alecto]
Length = 226
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 129/210 (61%), Positives = 157/210 (74%), Gaps = 17/210 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 24 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 83
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 84 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 143
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + A+DES
Sbjct: 144 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGN-- 201
Query: 178 SSLLKATNIVVP----GQEPESGRRSYNCC 203
+I VP GQ+P CC
Sbjct: 202 ----NVVDISVPPTTDGQKPN----KLQCC 223
>gi|351701311|gb|EHB04230.1| Ras-related protein Rab-11B [Heterocephalus glaber]
Length = 218
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 129/212 (60%), Positives = 158/212 (74%), Gaps = 17/212 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + A+DES
Sbjct: 136 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGNN- 194
Query: 178 SSLLKATNIVVP----GQEPESGRRSYNCCTS 205
+I VP GQ+P CC +
Sbjct: 195 -----VVDISVPPTTDGQKPN----KLQCCQT 217
>gi|340729738|ref|XP_003403153.1| PREDICTED: ras-related protein Rab-11A-like [Bombus terrestris]
gi|350411417|ref|XP_003489343.1| PREDICTED: ras-related protein Rab-11A-like [Bombus impatiens]
Length = 215
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 126/207 (60%), Positives = 157/207 (75%), Gaps = 12/207 (5%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL ELR HAD+NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK FAE+ GL F+ETSAL+STNVE AF +LTEIYRIVS+K + E ++
Sbjct: 136 TDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPEGDT------ 189
Query: 181 LKATNI----VVPGQEPESGRRSYNCC 203
++ N+ V P E R+ CC
Sbjct: 190 IRPQNVEPIDVKPTMNSEGMRKQ--CC 214
>gi|290462207|gb|ADD24151.1| Ras-related protein Rab-11A [Lepeophtheirus salmonis]
Length = 217
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 128/205 (62%), Positives = 155/205 (75%), Gaps = 3/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL ELR HAD NI+IMLVGNK DL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVDRWLRELRDHADSNIVIMLVGNKCDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK FAE+ L F+ETSAL+STNVE AF +LTEIYRIVS++ L E E +
Sbjct: 136 TDEAKHFAEQNNLSFIETSALDSTNVETAFHNILTEIYRIVSQRQLREPAEDEVTIRPNN 195
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
++ N V P E+ RR CC S
Sbjct: 196 VETIN-VKPTVSTENVRRQ--CCNS 217
>gi|440910197|gb|ELR60022.1| Ras-related protein Rab-11B, partial [Bos grunniens mutus]
Length = 225
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 129/210 (61%), Positives = 157/210 (74%), Gaps = 17/210 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 23 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 82
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 83 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 142
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + A+DES
Sbjct: 143 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGNN- 201
Query: 178 SSLLKATNIVVP----GQEPESGRRSYNCC 203
+I VP GQ+P CC
Sbjct: 202 -----VVDISVPPTTDGQKPN----KLQCC 222
>gi|356548648|ref|XP_003542712.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 126/205 (61%), Positives = 156/205 (76%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D NI++MLVGNK+DL LRAV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNKADLRHLRAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA+ FAE+E FMETSALES NVE AF VLT+IY +VSKKAL D+ ++L
Sbjct: 138 TEDARTFAERENTFFMETSALESLNVENAFTEVLTQIYHVVSKKALEIGDD-----PAAL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V ++ S + CC++
Sbjct: 193 PKGQTINVGSRDDVSAVKKSGCCSA 217
>gi|131849|sp|P22129.1|RB11B_DISOM RecName: Full=Ras-related protein Rab-11B; AltName: Full=ORA3;
Flags: Precursor
gi|213121|gb|AAA49233.1| GTP-binding protein [Discopyge ommata]
Length = 218
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 126/206 (61%), Positives = 154/206 (74%), Gaps = 9/206 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + +A+DES
Sbjct: 136 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQISDRSAHDESPGNN- 194
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCC 203
+I VP CC
Sbjct: 195 -----VVDISVPPTTDGQKSNKLQCC 215
>gi|71006264|ref|XP_757798.1| hypothetical protein UM01651.1 [Ustilago maydis 521]
gi|46097199|gb|EAK82432.1| hypothetical protein UM01651.1 [Ustilago maydis 521]
Length = 213
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 154/205 (75%), Gaps = 8/205 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS GKS LL+RF R+EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 15 LIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K ++ NV+RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 75 ITSAYYRGAVGALLVYDIAKHPTYVNVSRWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDE--SESGGSS 178
TE+AK FA + L F+ETSAL+++NVE AF +LTEIYRIVS KAL ++D+ SGG
Sbjct: 135 TEEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYRIVSNKALQSSDDVIKPSGGE- 193
Query: 179 SLLKATNIVVPGQEPESGRRSYNCC 203
T V P + + CC
Sbjct: 194 -----TITVQPSADDGGQTKKNGCC 213
>gi|355703084|gb|EHH29575.1| GTP-binding protein YPT3 [Macaca mulatta]
Length = 218
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 129/210 (61%), Positives = 157/210 (74%), Gaps = 17/210 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + A+DES
Sbjct: 136 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGNN- 194
Query: 178 SSLLKATNIVVP----GQEPESGRRSYNCC 203
+I VP GQ+P CC
Sbjct: 195 -----VVDISVPPTTDGQKPN----KLQCC 215
>gi|226509624|ref|NP_001151123.1| ras-related protein Rab11B [Zea mays]
gi|195644454|gb|ACG41695.1| ras-related protein Rab11B [Zea mays]
gi|223972799|gb|ACN30587.1| unknown [Zea mays]
gi|413946523|gb|AFW79172.1| Ras protein Rab11B [Zea mays]
Length = 216
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 156/205 (76%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVEDKVVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYD+T+ +F+NV RW+ ELR H D NI++MLVGNK+DL LRAVP
Sbjct: 77 ITSAYYRGAVGALVVYDVTRHVTFENVERWMRELRDHTDANIVMMLVGNKADLRHLRAVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAK FAE++ FMETSALE+ NVE AF VL +IYR+VSKKAL D+ ++
Sbjct: 137 TEDAKAFAERQNAFFMETSALEAMNVEDAFTEVLAQIYRVVSKKALDIGDD-----PAAP 191
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ I V G++ S + CC+S
Sbjct: 192 PRGHTINVGGKDDVSAVKKSACCSS 216
>gi|159906375|gb|ABX10876.1| RAB11B [Capra hircus]
Length = 218
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 129/210 (61%), Positives = 157/210 (74%), Gaps = 17/210 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + A+DES
Sbjct: 136 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGNN- 194
Query: 178 SSLLKATNIVVP----GQEPESGRRSYNCC 203
+I VP GQ+P CC
Sbjct: 195 -----VVDISVPPTTDGQKPN----KLQCC 215
>gi|60302752|ref|NP_001012569.1| ras-related protein Rab-11B [Gallus gallus]
gi|224087229|ref|XP_002190133.1| PREDICTED: ras-related protein Rab-11B [Taeniopygia guttata]
gi|60098771|emb|CAH65216.1| hypothetical protein RCJMB04_8i9 [Gallus gallus]
Length = 218
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 126/206 (61%), Positives = 154/206 (74%), Gaps = 9/206 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + +A+DES
Sbjct: 136 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRSAHDESPGNN- 194
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCC 203
+I VP CC
Sbjct: 195 -----VVDISVPPTTDGQKSNKLQCC 215
>gi|359493755|ref|XP_003634661.1| PREDICTED: ras-related protein Rab11D isoform 2 [Vitis vinifera]
Length = 218
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 125/204 (61%), Positives = 157/204 (76%), Gaps = 4/204 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EF+L+SK+TIGVEF T+TL + K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D NI++MLVGNKSDL L AV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDPNIVVMLVGNKSDLRHLVAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED K +AE+E L FMETSALE+TNVE AF VLT+IYRIVSKK++ DE G++S
Sbjct: 138 TEDGKTYAERESLYFMETSALEATNVENAFAEVLTQIYRIVSKKSVEGGDE----GAASS 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCT 204
+ A + ++ S + CC+
Sbjct: 194 VPAKGERINVKDDASALKRVGCCS 217
>gi|307185019|gb|EFN71248.1| Ras-related protein Rab-11A [Camponotus floridanus]
Length = 215
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 126/207 (60%), Positives = 157/207 (75%), Gaps = 12/207 (5%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL ELR HAD+NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK FAE+ GL F+ETSAL+STNVE AF +LTEIYRIVS+K + E ++
Sbjct: 136 TDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPEGDT------ 189
Query: 181 LKATNI----VVPGQEPESGRRSYNCC 203
++ N+ V P E R+ CC
Sbjct: 190 IRPHNVEQIEVKPTMNAEGMRKQ--CC 214
>gi|297793649|ref|XP_002864709.1| hypothetical protein ARALYDRAFT_919325 [Arabidopsis lyrata subsp.
lyrata]
gi|297310544|gb|EFH40968.1| hypothetical protein ARALYDRAFT_919325 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 156/205 (76%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+N+ RWL+ELR H D NI+IM VGNK+DL LRAV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHVTFENLERWLKELRDHTDSNIVIMFVGNKADLRHLRAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAK FAE+E FMETSALES NVE AF VL++IYR+VS+KAL D+ ++L
Sbjct: 138 TEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIGDD-----PAAL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V ++ S + CC++
Sbjct: 193 PKGQTINVGSKDDVSAVKKVGCCSN 217
>gi|148342496|gb|ABQ59034.1| RAB11B protein [Homo sapiens]
gi|254071179|gb|ACT64349.1| RAB11B, member RAS oncogene family protein [synthetic construct]
gi|254071181|gb|ACT64350.1| RAB11B, member RAS oncogene family protein [synthetic construct]
Length = 218
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 129/210 (61%), Positives = 157/210 (74%), Gaps = 17/210 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + A+DES
Sbjct: 136 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGNN- 194
Query: 178 SSLLKATNIVVP----GQEPESGRRSYNCC 203
+I VP GQ+P CC
Sbjct: 195 -----VVDISVPPTTDGQKPN----KLQCC 215
>gi|388521711|gb|AFK48917.1| unknown [Lotus japonicus]
Length = 218
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 126/205 (61%), Positives = 155/205 (75%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF TK+L I K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGKVIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+ RWL+ELR H D NI++ML+GNKSDL L V
Sbjct: 78 ITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGNKSDLRHLVTVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED K FAEKE L FMETSALE+TNVE AF VLT+IYRIVSK+A+ A D + S+S+
Sbjct: 138 TEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSKRAVEAGDRA----STSV 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ + + E S Y CC++
Sbjct: 194 VPSQGQTINVNEDSSVLNRYRCCSN 218
>gi|299109315|emb|CBH32505.1| ras-related protein, expressed [Triticum aestivum]
Length = 221
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 159/205 (77%), Gaps = 6/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDS VGKS LL+RF ++EF L+SK+TIGVEF T++L + K VKAQIWDTAGQERYRA
Sbjct: 23 IIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQERYRA 82
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+R +FDNVARWL+ELR H D +I++MLVGNKSDL L AV
Sbjct: 83 ITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDSSIVVMLVGNKSDLRHLVAVS 142
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED +E+AE E L FMETSAL++TNV+ AF VLT+IYRI S+K + A D+ GSS+
Sbjct: 143 TEDGQEYAEAESLYFMETSALDATNVDNAFSEVLTQIYRIASRKTVDAGDD----GSSAP 198
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K NI V ++ S + CC+S
Sbjct: 199 SKGENINV--KDDVSSLKRAGCCSS 221
>gi|15234020|ref|NP_193615.1| RAB GTPase homolog A1D [Arabidopsis thaliana]
gi|75206859|sp|Q9SN35.1|RAA1D_ARATH RecName: Full=Ras-related protein RABA1d; Short=AtRABA1d; AltName:
Full=Ras-related protein Rab11B; Short=AtRab11B;
AltName: Full=Ras-related protein SGBP; Short=AthSGBP
gi|4539399|emb|CAB37465.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|7268674|emb|CAB78882.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|28393029|gb|AAO41949.1| putative ras-related GTP binding protein [Arabidopsis thaliana]
gi|28827250|gb|AAO50469.1| putative ras-related GTP binding protein [Arabidopsis thaliana]
gi|110736954|dbj|BAF00433.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|332658691|gb|AEE84091.1| RAB GTPase homolog A1D [Arabidopsis thaliana]
Length = 214
Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 122/172 (70%), Positives = 144/172 (83%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T++L ++ K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL ELR H D NI++MLVGNKSDL L AV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDLRHLVAVQ 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDES 172
TEDAK FAE E L FMETSALESTNVE AF VLT+IY +VSKKA+ A ++S
Sbjct: 138 TEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSKKAMEAGEDS 189
>gi|78499349|gb|ABB45709.1| Ras-related protein RAB11A [Ovis aries]
Length = 208
Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 156/205 (76%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 8 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 67
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL RAVP
Sbjct: 68 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHFRAVP 127
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAEK GL F+ET AL+STNVE AF T+LTEIYRIV +K ++ E++
Sbjct: 128 TDEARAFAEKNGLSFIETFALDSTNVEAAFQTILTEIYRIVFQKQMSDRREND------- 180
Query: 181 LKATNIVVPGQEPES--GRRSYNCC 203
+ +N VVP P + + CC
Sbjct: 181 MFPSNNVVPIHVPPTTENKPKVQCC 205
>gi|217070948|gb|ACJ83834.1| unknown [Medicago truncatula]
Length = 229
Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 119/207 (57%), Positives = 162/207 (78%), Gaps = 3/207 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDS VGKSQLL RF R+EF L SKATIGVEF TKT+++ HK VKAQIWDTAGQERY+A
Sbjct: 21 MIGDSGVGKSQLLNRFVRNEFHLKSKATIGVEFLTKTVLMDHKLVKAQIWDTAGQERYQA 80
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T+AYYRGA GA+L YDITKR +F+++ +WL+EL HADKNI++MLVGNKSDL ++R VP
Sbjct: 81 ITTAYYRGATGALLTYDITKRHTFNHIEKWLDELHNHADKNIVVMLVGNKSDLSSIREVP 140
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+A++ A+++G F+ETSAL+S NVE AFL +L++IY +SKK +TA+ + +L
Sbjct: 141 IEEAEDLAKQKGFFFIETSALDSNNVEPAFLGLLSQIYVTMSKKHITADGRERNWDKVNL 200
Query: 181 -LKATNIVVPGQEPE--SGRRSYNCCT 204
+ T ++V QEPE ++ ++CC+
Sbjct: 201 EFEGTKLLVSSQEPECQKSKKRFSCCS 227
>gi|148701357|gb|EDL33304.1| mCG14915, isoform CRA_b [Mus musculus]
Length = 218
Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 130/212 (61%), Positives = 156/212 (73%), Gaps = 17/212 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T ++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATHSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + A+DES
Sbjct: 136 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGNN- 194
Query: 178 SSLLKATNIVVP----GQEPESGRRSYNCCTS 205
+I VP GQ P CC S
Sbjct: 195 -----VVDISVPPTTDGQRPN----KLQCCQS 217
>gi|58332330|ref|NP_001011048.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus (Silurana)
tropicalis]
gi|148237448|ref|NP_001087959.1| uncharacterized protein LOC494642 [Xenopus laevis]
gi|52078458|gb|AAH82421.1| LOC494642 protein [Xenopus laevis]
gi|54037941|gb|AAH84173.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus (Silurana)
tropicalis]
gi|89267988|emb|CAJ81987.1| RAB11B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89271367|emb|CAJ83815.1| RAB11B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 218
Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 126/206 (61%), Positives = 154/206 (74%), Gaps = 9/206 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + +A+DES
Sbjct: 136 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRSAHDESPGNN- 194
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCC 203
+I VP CC
Sbjct: 195 -----VVDISVPPTTDGQKSSKLQCC 215
>gi|348504740|ref|XP_003439919.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
Length = 218
Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 159/205 (77%), Gaps = 3/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAEK L F+ETSAL+STNVE AF ++LTEIYRIVS+K ++ E +++
Sbjct: 136 TDEARAFAEKNTLSFIETSALDSTNVEEAFKSILTEIYRIVSQKQISDRSAHEDSPGNNV 195
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ + V P + + G + CC S
Sbjct: 196 VDIS--VPPTMDGQRGNK-LPCCQS 217
>gi|388512933|gb|AFK44528.1| unknown [Lotus japonicus]
Length = 217
Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 126/205 (61%), Positives = 156/205 (76%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D NI++MLVGNK+DL LRAV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDTNIVVMLVGNKADLRHLRAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED+ FAE+E FMETSALES NVE AF VLT+IYR+VSKKAL D+ ++L
Sbjct: 138 TEDSTAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVSKKALEIGDD-----PAAL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V ++ S + CC+S
Sbjct: 193 PKGQTINVGSRDDVSAVKKSGCCSS 217
>gi|410950267|ref|XP_003981831.1| PREDICTED: ras-related protein Rab-11B [Felis catus]
Length = 218
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 129/210 (61%), Positives = 157/210 (74%), Gaps = 17/210 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + A+DES
Sbjct: 136 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGNN- 194
Query: 178 SSLLKATNIVVP----GQEPESGRRSYNCC 203
+I VP GQ+P CC
Sbjct: 195 -----VVDISVPPTTDGQKPT----KLQCC 215
>gi|225461703|ref|XP_002285495.1| PREDICTED: ras-related protein Rab11D isoform 1 [Vitis vinifera]
gi|147834751|emb|CAN75016.1| hypothetical protein VITISV_035368 [Vitis vinifera]
Length = 218
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/204 (61%), Positives = 157/204 (76%), Gaps = 4/204 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EF+L+SK+TIGVEF T+TL + K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D NI++MLVGNKSDL L AV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDPNIVVMLVGNKSDLRHLVAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED K +AE+E L FMETSALE+TNVE AF VLT+IYRIVSKK++ DE G++S
Sbjct: 138 TEDGKTYAERESLYFMETSALEATNVENAFAEVLTQIYRIVSKKSVEGGDE----GAASS 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCT 204
+ A + ++ S + CC+
Sbjct: 194 VPAKGERINVKDDASALKRVGCCS 217
>gi|170596273|ref|XP_001902705.1| Ras-related protein Rab-11B [Brugia malayi]
gi|312076250|ref|XP_003140777.1| rab family protein [Loa loa]
gi|158589464|gb|EDP28446.1| Ras-related protein Rab-11B, putative [Brugia malayi]
gi|307764062|gb|EFO23296.1| Ras-like protein Rab-11B [Loa loa]
gi|402584459|gb|EJW78400.1| rab family protein [Wuchereria bancrofti]
Length = 215
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 124/207 (59%), Positives = 162/207 (78%), Gaps = 10/207 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD+NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDES--ESGGSS 178
T++AK +AEK L F+ETSAL+STNVE AF +LTEIY+ VS K + ++ + + GS+
Sbjct: 136 TDEAKAYAEKNQLSFIETSALDSTNVEAAFTNILTEIYKSVSVKHVGGDNRAAISTPGSN 195
Query: 179 SLLKATNIVVPGQEPESGRRSYNCCTS 205
+ ++ P EP++ ++ CC+S
Sbjct: 196 GI-----VISPTAEPQTKKQ---CCSS 214
>gi|449438115|ref|XP_004136835.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
gi|449530235|ref|XP_004172101.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 219
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/205 (60%), Positives = 158/205 (77%), Gaps = 3/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R++F+L+SK+TIGVEF TK+L I K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGKVIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+R +F+N ARWL+ELR H D N+++ML+GNK DL L VP
Sbjct: 78 ITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMVVMLIGNKCDLRHLILVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED K FAE+E L FMETSAL++TNVE AF VL++IYRIVSK+++ A D G +S+
Sbjct: 138 TEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSKRSVEAGD---IGSASTT 194
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
L + + ++ S + CC+S
Sbjct: 195 LPSKGQTIDVKDDSSVLKRIGCCSS 219
>gi|49456343|emb|CAG46492.1| RAB11B [Homo sapiens]
Length = 218
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 129/210 (61%), Positives = 157/210 (74%), Gaps = 17/210 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + A+DES
Sbjct: 136 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADCAAHDESPGNN- 194
Query: 178 SSLLKATNIVVP----GQEPESGRRSYNCC 203
+I VP GQ+P CC
Sbjct: 195 -----VVDISVPPTTDGQKPN----KLQCC 215
>gi|60833728|gb|AAX37062.1| RAB11B member RAS oncogene family [synthetic construct]
Length = 219
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 129/210 (61%), Positives = 157/210 (74%), Gaps = 17/210 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + A+DES
Sbjct: 136 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADCAAHDESPGNN- 194
Query: 178 SSLLKATNIVVP----GQEPESGRRSYNCC 203
+I VP GQ+P CC
Sbjct: 195 -----VVDISVPPTTDGQKPN----KLQCC 215
>gi|355755401|gb|EHH59148.1| GTP-binding protein YPT3, partial [Macaca fascicularis]
Length = 213
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 127/200 (63%), Positives = 155/200 (77%), Gaps = 13/200 (6%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + A+DES
Sbjct: 136 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGNN- 194
Query: 178 SSLLKATNIVVP----GQEP 193
+I VP GQ+P
Sbjct: 195 -----VVDISVPPTTDGQKP 209
>gi|169866639|ref|XP_001839906.1| GTPase [Coprinopsis cinerea okayama7#130]
gi|116498990|gb|EAU81885.1| GTPase [Coprinopsis cinerea okayama7#130]
Length = 209
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 129/208 (62%), Positives = 156/208 (75%), Gaps = 18/208 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 15 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K ++ NV RWL+ELR HAD NI+IMLVGNKSDL+ LRAVP
Sbjct: 75 ITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDLKHLRAVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK FA + GL F+ETSAL+++NVE AF T+LT+IYRIVS K+L ES S
Sbjct: 135 TDEAKAFATENGLSFIETSALDASNVESAFQTILTDIYRIVSAKSL----ESSS------ 184
Query: 181 LKATNIVVPGQ-----EPESGRRSYNCC 203
TNI P Q PE + CC
Sbjct: 185 ---TNIEPPTQGISVTAPEPADKGGKCC 209
>gi|348504744|ref|XP_003439921.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
Length = 218
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 127/208 (61%), Positives = 155/208 (74%), Gaps = 9/208 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + +A+DES
Sbjct: 136 TDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRSAHDESPGNN- 194
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCCTS 205
+I VP CC S
Sbjct: 195 -----VVDISVPPTTDGQKGNKLQCCQS 217
>gi|224145285|ref|XP_002325590.1| predicted protein [Populus trichocarpa]
gi|222862465|gb|EEE99971.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 157/205 (76%), Gaps = 6/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D NI+IMLVGNK+DL LRAV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVT 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA FAE+E FMETSALES NVE AF VLT+I+R+VS+KAL D+ ++L
Sbjct: 138 TEDATAFAERENTFFMETSALESLNVENAFTEVLTQIHRVVSRKALDVGDD-----PAAL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V G++ S + CC++
Sbjct: 193 PKGQTITV-GKDDVSAVKKVGCCSA 216
>gi|326494958|dbj|BAJ85574.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 221
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 159/205 (77%), Gaps = 6/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDS VGKS LL+RF ++EF L+SK+TIGVEF T++L + K VKAQIWDTAGQERYRA
Sbjct: 23 IIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQERYRA 82
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+R +FDNVARWL+ELR H D +I++MLVGNKSDL L AV
Sbjct: 83 ITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDPSIVVMLVGNKSDLRHLVAVS 142
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED +E+AE E L FMETSAL++TNV+ AF VLT+IYRI S+K + A D+ GSS+
Sbjct: 143 TEDGQEYAEAESLYFMETSALDATNVDNAFSEVLTQIYRIASRKTVDAGDD----GSSAP 198
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K NI V ++ S + CC+S
Sbjct: 199 SKGENINV--KDDVSSLKRAGCCSS 221
>gi|301785982|ref|XP_002928408.1| PREDICTED: ras-related protein Rab-11B-like [Ailuropoda
melanoleuca]
Length = 274
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 129/210 (61%), Positives = 157/210 (74%), Gaps = 17/210 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + A+DES
Sbjct: 136 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGN-- 193
Query: 178 SSLLKATNIVVP----GQEPESGRRSYNCC 203
+I VP GQ+P CC
Sbjct: 194 ----NVVDISVPPTTDGQKPN----KLQCC 215
>gi|116791471|gb|ABK25992.1| unknown [Picea sitchensis]
Length = 217
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/204 (61%), Positives = 154/204 (75%), Gaps = 4/204 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSITVDDKVIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D NI+IMLVGNK+DL LRAV
Sbjct: 77 ITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRHLRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
ED K FAE+E FMETSALESTNVE AF VL++IYRIVSKKAL ++ + S
Sbjct: 137 IEDGKAFAERENTYFMETSALESTNVENAFTEVLSQIYRIVSKKALDVGEDPAAVPS--- 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCT 204
K I V ++ + + CC+
Sbjct: 194 -KGQTIHVGNKDDVTAMKKVGCCS 216
>gi|302837804|ref|XP_002950461.1| RabA/Rab11 [Volvox carteri f. nagariensis]
gi|300264466|gb|EFJ48662.1| RabA/Rab11 [Volvox carteri f. nagariensis]
Length = 219
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 128/207 (61%), Positives = 155/207 (74%), Gaps = 7/207 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTL---VIHHKNVKAQIWDTAGQER 57
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T+++ + K +KAQIWDTAGQER
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQAGTVDGKTIKAQIWDTAGQER 76
Query: 58 YRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLR 117
YRA+TSAYYRGAVGA+LVYDITK +F+NV RWL+ELR HAD NI+IMLVGNKSDL+ LR
Sbjct: 77 YRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADANIVIMLVGNKSDLKHLR 136
Query: 118 AVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGS 177
V TE A+ F E+EGL F+ETSAL+STNVE AF +LTEIY IVSKK L + D G
Sbjct: 137 DVQTEVAQAFCEREGLSFIETSALDSTNVEKAFQQILTEIYHIVSKKVLDSEDNRPKIGE 196
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCCT 204
L IV+ Q + ++ CC+
Sbjct: 197 GRDL----IVIDKQHDDGAKKKGGCCS 219
>gi|15232477|ref|NP_188124.1| RAB GTPase-like protein A1G [Arabidopsis thaliana]
gi|75273740|sp|Q9LK99.1|RAA1G_ARATH RecName: Full=Ras-related protein RABA1g; Short=AtRABA1g
gi|8777489|dbj|BAA97069.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|26452472|dbj|BAC43321.1| putative ras-related GTP-binding protein [Arabidopsis thaliana]
gi|28973321|gb|AAO63985.1| putative Ras family GTP-binding protein [Arabidopsis thaliana]
gi|332642090|gb|AEE75611.1| RAB GTPase-like protein A1G [Arabidopsis thaliana]
Length = 217
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 126/205 (61%), Positives = 157/205 (76%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKIVKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H + NI+IMLVGNK+DL LRAV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIVIMLVGNKADLRHLRAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAK FAE+E FMETSALE+ NVE AF VL++IYR+ SKKAL D+ ++L
Sbjct: 138 TEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASKKALDIGDD-----HTTL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K +I V ++ S + CC+S
Sbjct: 193 PKGQSINVGSKDDVSEVKKVGCCSS 217
>gi|212723804|ref|NP_001132839.1| uncharacterized protein LOC100194331 [Zea mays]
gi|242096112|ref|XP_002438546.1| hypothetical protein SORBIDRAFT_10g021730 [Sorghum bicolor]
gi|194695542|gb|ACF81855.1| unknown [Zea mays]
gi|195624594|gb|ACG34127.1| ras-related protein RIC2 [Zea mays]
gi|195643338|gb|ACG41137.1| ras-related protein RIC2 [Zea mays]
gi|241916769|gb|EER89913.1| hypothetical protein SORBIDRAFT_10g021730 [Sorghum bicolor]
gi|413943895|gb|AFW76544.1| Ras protein RIC2 [Zea mays]
Length = 217
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 128/205 (62%), Positives = 158/205 (77%), Gaps = 6/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T++L + K VKAQIWDTAGQERYRA
Sbjct: 19 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQERYRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D NI++MLVGNKSDL L AV
Sbjct: 79 ITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDLRHLVAVQ 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++ K FAE+E L FMETSALESTNVE AF VLT+IYRIVSK+A+ A +++ SG
Sbjct: 139 TDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRAVEAGEDAASGPGKG- 197
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ NI ++ S + CC+S
Sbjct: 198 -EKINI----KDDVSAVKKGGCCSS 217
>gi|303273638|ref|XP_003056179.1| ras-related protein rab11a-like protein [Micromonas pusilla
CCMP1545]
gi|226462263|gb|EEH59555.1| ras-related protein rab11a-like protein [Micromonas pusilla
CCMP1545]
Length = 216
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/207 (60%), Positives = 161/207 (77%), Gaps = 8/207 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF L+SK+TIGVEF T+T+ + +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIEVDTNTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITK +S+++V +WL+ELR HAD NI+IML+GNK DL+ LR V
Sbjct: 76 ITSAYYRGAVGALLVYDITKSESYEDVEKWLKELRDHADANIVIMLIGNKCDLKHLRCVQ 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALT--ANDESESGGSS 178
TEDA+ FA EGL F ETSALESTNVELAF +LTE+++IVSKK+ + +ND+S+ GSS
Sbjct: 136 TEDARLFAANEGLSFTETSALESTNVELAFHQILTEVFQIVSKKSQSNESNDQSQRHGSS 195
Query: 179 SLLKATNIVVPGQEPESGRRSYNCCTS 205
++ N + G + + CC++
Sbjct: 196 TI--EVNAINDGVKKSKSQ----CCSA 216
>gi|388508486|gb|AFK42309.1| unknown [Medicago truncatula]
Length = 217
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 156/205 (76%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D NI++MLVGNK+DL LRAV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNKADLRHLRAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA F+E+E FMETSALES NVE AF VLT+IYR+VSKKAL D+ ++L
Sbjct: 138 TEDATSFSERENTYFMETSALESLNVESAFTEVLTQIYRVVSKKALEIGDD-----PAAL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V ++ S + CC++
Sbjct: 193 PKGQTINVGSRDDVSAVKKAGCCSA 217
>gi|297800182|ref|XP_002867975.1| hypothetical protein ARALYDRAFT_492979 [Arabidopsis lyrata subsp.
lyrata]
gi|297313811|gb|EFH44234.1| hypothetical protein ARALYDRAFT_492979 [Arabidopsis lyrata subsp.
lyrata]
Length = 214
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 122/172 (70%), Positives = 143/172 (83%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T++L ++ K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL ELR H D NI++MLVGNKSDL L AV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDLRHLVAVQ 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDES 172
TEDAK FAE E L FMETSALESTNVE AF VLT+IY +VSKKA+ A +S
Sbjct: 138 TEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSKKAMEAGQDS 189
>gi|134111857|ref|XP_775464.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|321259045|ref|XP_003194243.1| GTPase of the Ypt/Rab family [Cryptococcus gattii WM276]
gi|50258123|gb|EAL20817.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|317460714|gb|ADV22456.1| GTPase of the Ypt/Rab family involved in intra-Golgi traffic or the
budding of post-Golgi vesicles from the trans-Golgi,
putative; Ypt31p [Cryptococcus gattii WM276]
Length = 213
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 158/205 (77%), Gaps = 8/205 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 15 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL+ LRAV
Sbjct: 75 ITSAYYRGAVGALLVYDIAKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLKHLRAVS 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDE--SESGGSS 178
T++AK+FA + GL F+ETSAL+++NVE AF +LT+IYRIVS K+L ++ + SGG
Sbjct: 135 TDEAKQFATENGLSFIETSALDASNVESAFQNILTDIYRIVSSKSLESSGDVIKPSGGE- 193
Query: 179 SLLKATNIVVPGQEPESGRRSYNCC 203
T +V P + + CC
Sbjct: 194 -----TILVAPTADDGGAKSGSKCC 213
>gi|3024529|sp|Q40195.1|RB11E_LOTJA RecName: Full=Ras-related protein Rab11E
gi|1370150|emb|CAA98181.1| RAB11E [Lotus japonicus]
Length = 218
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 126/205 (61%), Positives = 154/205 (75%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF TK+L I K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGKVIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+ RWL+ELR H D NI++ML+GNKSDL L V
Sbjct: 78 ITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGNKSDLRHLVTVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED K FAEKE L FMETSALE+TNVE AF VLT+IYRIVSK+A+ A D S+S+
Sbjct: 138 TEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSKRAVEAGDRP----STSV 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ + + E S Y CC++
Sbjct: 194 VPSQGQTINVNEDSSVLNRYRCCSN 218
>gi|357446819|ref|XP_003593685.1| GTP-binding protein ras-like protein [Medicago truncatula]
gi|355482733|gb|AES63936.1| GTP-binding protein ras-like protein [Medicago truncatula]
Length = 217
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 156/205 (76%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D NI++MLVGNK+DL LRAV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNKADLRHLRAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED+ FAE+E FMETSALES NVE AF VLT+IYR+VSKKAL D+ ++L
Sbjct: 138 TEDSTAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSKKALEIGDD-----PTAL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V ++ S + CC++
Sbjct: 193 PKGQTIDVGSRDDVSAVKKSGCCSA 217
>gi|367035076|ref|XP_003666820.1| hypothetical protein MYCTH_2140896 [Myceliophthora thermophila ATCC
42464]
gi|347014093|gb|AEO61575.1| hypothetical protein MYCTH_2140896 [Myceliophthora thermophila ATCC
42464]
Length = 213
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 126/203 (62%), Positives = 156/203 (76%), Gaps = 3/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ I K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQIDGKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K SF+NV RWL+ELR HAD NI+IMLVGNK+D LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDISKSLSFENVTRWLKELRDHADSNIVIMLVGNKTDQRHLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED K FA + GL F+ETSALE+TNV+LAF +LT IY+IVS K+L A + ++ G
Sbjct: 134 TEDGKNFASENGLSFIETSALEATNVDLAFQNILTSIYQIVSSKSL-AEEGADVGKKFDP 192
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ NI + + + +S CC
Sbjct: 193 REGNNISLSQEGAKKEDKS--CC 213
>gi|184186123|ref|NP_001116984.1| rab11 GTPase homolog SUrab11p [Strongylocentrotus purpuratus]
Length = 217
Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/205 (60%), Positives = 155/205 (75%), Gaps = 3/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + +K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T+++K FAE+ L F+ETSAL+STNVE AF+ +LTEIY+IVS+K + E SS +
Sbjct: 136 TDESKVFAERNTLSFIETSALDSTNVEQAFVQILTEIYKIVSQKNIRDGGNGEDSPSSDV 195
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
I +P + CC S
Sbjct: 196 ---KPITIPPTHGYTEPNKRKCCQS 217
>gi|395841772|ref|XP_003793707.1| PREDICTED: ras-related protein Rab-11B [Otolemur garnettii]
Length = 249
Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 129/210 (61%), Positives = 157/210 (74%), Gaps = 17/210 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 47 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 106
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 107 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 166
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + A+DES
Sbjct: 167 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGN-- 224
Query: 178 SSLLKATNIVVP----GQEPESGRRSYNCC 203
+I VP GQ+P CC
Sbjct: 225 ----NVVDISVPPTTDGQKPN----KLQCC 246
>gi|260820529|ref|XP_002605587.1| hypothetical protein BRAFLDRAFT_266781 [Branchiostoma floridae]
gi|229290921|gb|EEN61597.1| hypothetical protein BRAFLDRAFT_266781 [Branchiostoma floridae]
Length = 217
Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/206 (60%), Positives = 157/206 (76%), Gaps = 9/206 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++AK FAEK L F+ETSAL+STNVE AF +LTEIY IVS+K + +DES S
Sbjct: 136 TDEAKAFAEKNSLSFIETSALDSTNVETAFQNILTEIYHIVSQKQIRDSPGDDESPSTNV 195
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCC 203
++ V P + ++ ++ CC
Sbjct: 196 QTI-----TVAPTTDADT-KKKLACC 215
>gi|388504946|gb|AFK40539.1| unknown [Lotus japonicus]
Length = 218
Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 126/205 (61%), Positives = 154/205 (75%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF TK+L I K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFVTKSLNIDGKVIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+ RWL+ELR H D NI++ML+GNKSDL L V
Sbjct: 78 ITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGNKSDLRHLVTVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED K FAEKE L FMETSALE+TNVE AF VLT+IYRIVSK+A+ A D + + + S
Sbjct: 138 TEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSKRAVEAGDRASTSVAPSQ 197
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ N+ E S Y CC++
Sbjct: 198 GQTINV----NEDSSVLNRYRCCSN 218
>gi|47216427|emb|CAG01978.1| unnamed protein product [Tetraodon nigroviridis]
Length = 218
Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 127/206 (61%), Positives = 157/206 (76%), Gaps = 9/206 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + +A+DES
Sbjct: 136 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAERSAHDESPGNNV 195
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCC 203
+ V P + + G R CC
Sbjct: 196 VDIS-----VPPTTDSQRGGR-LQCC 215
>gi|444436406|gb|AGE09571.1| RABA-like protein [Eucalyptus cladocalyx]
Length = 281
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 128/205 (62%), Positives = 156/205 (76%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T++L + K +KAQIWDTAGQERYRA
Sbjct: 81 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRA 140
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL ELR H D NI++MLVGNKSDL L AV
Sbjct: 141 ITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDLRHLLAVS 200
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED K FAE+E L FMETSALE+TNVE AF VLT+IY IVSKKAL + SE S++
Sbjct: 201 TEDGKSFAEREALFFMETSALEATNVENAFAEVLTQIYNIVSKKAL---ETSEQANGSAV 257
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ G++ + +R CC+S
Sbjct: 258 PSQGEKIDVGKDVSAVKRG-GCCSS 281
>gi|308322445|gb|ADO28360.1| ras-related protein rab-11b [Ictalurus furcatus]
Length = 218
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 126/206 (61%), Positives = 154/206 (74%), Gaps = 9/206 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + +A+DES
Sbjct: 136 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRSAHDESPGNN- 194
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCC 203
+I VP CC
Sbjct: 195 -----VVDISVPPTTDGQKGSKLQCC 215
>gi|297830058|ref|XP_002882911.1| hypothetical protein ARALYDRAFT_478935 [Arabidopsis lyrata subsp.
lyrata]
gi|297328751|gb|EFH59170.1| hypothetical protein ARALYDRAFT_478935 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 126/205 (61%), Positives = 157/205 (76%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKIVKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H + NI+IMLVGNK+DL LRAV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIVIMLVGNKADLRHLRAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAK FAE+E FMETSALE+ NVE AF VL++IYR+ SKKAL D+ ++L
Sbjct: 138 TEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASKKALDIGDD-----PATL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K +I V ++ S + CC+S
Sbjct: 193 PKGQSINVGSKDDVSEVKKVGCCSS 217
>gi|49168476|emb|CAG38733.1| RAB11B [Homo sapiens]
Length = 218
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 128/210 (60%), Positives = 157/210 (74%), Gaps = 17/210 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ET+AL+STNVE AF +LTEIYRIVS+K + A+DES
Sbjct: 136 TDEARAFAEKNNLSFIETAALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGNN- 194
Query: 178 SSLLKATNIVVP----GQEPESGRRSYNCC 203
+I VP GQ+P CC
Sbjct: 195 -----VVDISVPPTTDGQKPN----KLQCC 215
>gi|348551270|ref|XP_003461453.1| PREDICTED: ras-related protein Rab-11B-like [Cavia porcellus]
Length = 278
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 129/210 (61%), Positives = 157/210 (74%), Gaps = 17/210 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 76 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 135
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 136 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 195
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + A+DES
Sbjct: 196 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGN-- 253
Query: 178 SSLLKATNIVVP----GQEPESGRRSYNCC 203
+I VP GQ+P CC
Sbjct: 254 ----NVVDISVPPTTDGQKPS----KLQCC 275
>gi|343428333|emb|CBQ71863.1| probable GTP-binding protein Rab11 [Sporisorium reilianum SRZ2]
gi|388852902|emb|CCF53350.1| probable probable GTP-binding protein Rab11 [Ustilago hordei]
Length = 213
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 126/205 (61%), Positives = 154/205 (75%), Gaps = 8/205 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS GKS LL+RF R+EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 15 LIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K ++ NV+RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 75 ITSAYYRGAVGALLVYDIAKHPTYVNVSRWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDE--SESGGSS 178
T++AK FA + L F+ETSAL+++NVE AF +LTEIYRIVS KAL ++D+ SGG
Sbjct: 135 TDEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYRIVSNKALQSSDDVIKPSGGE- 193
Query: 179 SLLKATNIVVPGQEPESGRRSYNCC 203
T V P + + CC
Sbjct: 194 -----TITVQPSADDGGQTKKNGCC 213
>gi|17507543|ref|NP_490675.1| Protein RAB-11.1 [Caenorhabditis elegans]
gi|373220016|emb|CCD71701.1| Protein RAB-11.1 [Caenorhabditis elegans]
Length = 211
Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 122/203 (60%), Positives = 156/203 (76%), Gaps = 9/203 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD+NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK +AE+ L F+ETSAL+STNVE AF +LTEIY+ VS K + + + GGS ++
Sbjct: 136 TDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHVGTDRQGYGGGSGTI 195
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ + P +P + CC
Sbjct: 196 IPS-----PASDPPKKQ----CC 209
>gi|147802502|emb|CAN73117.1| hypothetical protein VITISV_002485 [Vitis vinifera]
Length = 215
Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 128/205 (62%), Positives = 154/205 (75%), Gaps = 6/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+E L+SK+TIGVEF T+TL + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNEXCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITKRQ+F+NV RWL ELR HAD NI+IM+ GNKSDL LRAV
Sbjct: 77 ITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIMMAGNKSDLNHLRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
+DA+ AEKEGL F+ETSALE+ NVE AF T+L +IY I+SKKAL A + S +L
Sbjct: 137 GDDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAA----QEAASINL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
T I V +R+ CC++
Sbjct: 193 PHGTTINVGDLSGNMNKRT--CCST 215
>gi|452357|emb|CAA82708.1| guanine nucleotide regulatory protein [Vicia faba]
gi|1098294|prf||2115367B small GTP-binding protein
Length = 207
Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 156/205 (76%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 8 LIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRA 67
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D NI++MLVGNK+DL LRAV
Sbjct: 68 ITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNKADLRHLRAVS 127
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED+ FAE+E FMETSALES NVE AF VLT+IYR+VSKKAL D+ ++L
Sbjct: 128 TEDSTAFAERENTFFMETSALESLNVESAFTEVLTQIYRVVSKKALEIGDD-----PAAL 182
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V ++ S + CC++
Sbjct: 183 PKGQTINVGSRDDVSAVKKGGCCSA 207
>gi|218228|dbj|BAA02904.1| ras-related GTP binding protein [Oryza sativa]
Length = 217
Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 122/175 (69%), Positives = 147/175 (84%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T++L + K VKAQIWDTAGQERYRA
Sbjct: 19 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQERYRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D NI++MLVGNKSDL L AV
Sbjct: 79 ITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDLRHLVAVQ 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESG 175
T++ K FAE+E L FMETSALESTNVE AF VLT+IYRIVSK+++ A D++ SG
Sbjct: 139 TDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSVEAGDDAGSG 193
>gi|115468476|ref|NP_001057837.1| Os06g0551400 [Oryza sativa Japonica Group]
gi|109940140|sp|P40393.2|RIC2_ORYSJ RecName: Full=Ras-related protein RIC2
gi|13195452|gb|AAK15703.1| GTP-binding protein [Oryza sativa]
gi|53792703|dbj|BAD53715.1| GTP-binding protein [Oryza sativa Japonica Group]
gi|113595877|dbj|BAF19751.1| Os06g0551400 [Oryza sativa Japonica Group]
gi|125555691|gb|EAZ01297.1| hypothetical protein OsI_23327 [Oryza sativa Indica Group]
gi|215694833|dbj|BAG90024.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635728|gb|EEE65860.1| hypothetical protein OsJ_21648 [Oryza sativa Japonica Group]
Length = 217
Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 122/175 (69%), Positives = 147/175 (84%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T++L + K VKAQIWDTAGQERYRA
Sbjct: 19 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQERYRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D NI++MLVGNKSDL L AV
Sbjct: 79 ITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDLRHLVAVQ 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESG 175
T++ K FAE+E L FMETSALESTNVE AF VLT+IYRIVSK+++ A D++ SG
Sbjct: 139 TDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSVEAGDDAGSG 193
>gi|213511282|ref|NP_001134031.1| Ras-related protein Rab-11A [Salmo salar]
gi|209156222|gb|ACI34343.1| Ras-related protein Rab-11A [Salmo salar]
Length = 216
Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 123/206 (59%), Positives = 160/206 (77%), Gaps = 5/206 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIHVEGKTVKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++N RWL+EL+ HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
++AK AEK GL F+ETSAL+S+NVELAF T+LT IY IVS++ +T +++ +S++
Sbjct: 136 MDEAKALAEKHGLSFLETSALDSSNVELAFQTILTAIYNIVSQRQMTGRSDTDFSPNSNV 195
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
+ T V P Q + +S CC ++
Sbjct: 196 VPIT--VQPTQ---NAAKSSACCQNN 216
>gi|219990677|gb|ACL68712.1| FI09227p [Drosophila melanogaster]
Length = 214
Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 119/173 (68%), Positives = 146/173 (84%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL ELRGHAD+NI+IMLVGNKSDL LR+VP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRGHADQNIVIMLVGNKSDLRHLRSVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESE 173
T++AK FAE+ GL F+ETSAL+STNVE AF +LTEIYRIVS+K + E +
Sbjct: 136 TDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPEGD 188
>gi|348500484|ref|XP_003437803.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
gi|410924493|ref|XP_003975716.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
Length = 218
Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 126/206 (61%), Positives = 154/206 (74%), Gaps = 9/206 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + +A+DES
Sbjct: 136 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAERSAHDESPGN-- 193
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCC 203
+I VP CC
Sbjct: 194 ----NVVDISVPPTTDGQRGSKLQCC 215
>gi|19114579|ref|NP_593667.1| GTPase Ypt3 [Schizosaccharomyces pombe 972h-]
gi|141306|sp|P17610.1|YPT3_SCHPO RecName: Full=GTP-binding protein ypt3; AltName: Full=RAB
gi|5038|emb|CAA36946.1| unnamed protein product [Schizosaccharomyces pombe]
gi|5152|emb|CAA36320.1| ypt3 [Schizosaccharomyces pombe]
gi|1122368|emb|CAA92383.1| GTPase Ypt3 [Schizosaccharomyces pombe]
Length = 214
Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 123/203 (60%), Positives = 156/203 (76%), Gaps = 3/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL RF R+EF+++SK+TIGVEF T+ +V+ +K +KAQIWDTAGQERYRA
Sbjct: 15 LIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDITK+ SFDNV RWL+ELR HAD NI+IMLVGNK+DL LRAV
Sbjct: 75 ITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVS 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+A+ FA + L F+ETSA++++NVE AF TVLTEI+RIVS ++L A D+ G +
Sbjct: 135 TEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAGDD---GVHPTA 191
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ NI + + S CC
Sbjct: 192 GQTLNIAPTMNDLNKKKSSSQCC 214
>gi|224127991|ref|XP_002320214.1| predicted protein [Populus trichocarpa]
gi|222860987|gb|EEE98529.1| predicted protein [Populus trichocarpa]
Length = 219
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 119/186 (63%), Positives = 150/186 (80%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGK+Q+L+RF ++EF DSK+TIGVEFQT+T++I K +KAQIWDTAGQERYRA
Sbjct: 13 VIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTRTVIIKDKVIKAQIWDTAGQERYRA 72
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA+GAMLVYDITKR +FD+VARW+EELR HAD +I+IML+GNK+DL LRAVP
Sbjct: 73 VTSAYYRGALGAMLVYDITKRPTFDHVARWVEELRAHADNSIVIMLIGNKADLVDLRAVP 132
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA EFAE++GL F ETSAL NV+ AF +L EIY ++ KK+L + + +
Sbjct: 133 TEDAVEFAEEQGLFFSETSALSGDNVDGAFFRLLEEIYGVICKKSLECGNGNPHAADAIT 192
Query: 181 LKATNI 186
L+ + I
Sbjct: 193 LRGSKI 198
>gi|399163155|gb|AFP33153.1| rab-11.1, partial [Caenorhabditis elegans]
Length = 210
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 122/203 (60%), Positives = 156/203 (76%), Gaps = 9/203 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 15 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD+NI+IMLVGNKSDL LRAVP
Sbjct: 75 ITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNKSDLRHLRAVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK +AE+ L F+ETSAL+STNVE AF +LTEIY+ VS K + + + GGS ++
Sbjct: 135 TDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHVGTDRQGYGGGSGTI 194
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ + P +P + CC
Sbjct: 195 IPS-----PASDPPKKQ----CC 208
>gi|358248612|ref|NP_001239655.1| uncharacterized protein LOC100810759 [Glycine max]
gi|255646959|gb|ACU23949.1| unknown [Glycine max]
Length = 217
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 128/205 (62%), Positives = 157/205 (76%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EF+L+SK+TIGVEF T+TL + K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D NI++MLVGNKSDL L AV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDANIVVMLVGNKSDLRHLVAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED K +AEKE L FMETSALE+TNVE AF VLT+IYRIVSKKA+ +E+G +S
Sbjct: 138 TEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYRIVSKKAVEG---AENGTASVP 194
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I + + S + CC+S
Sbjct: 195 AKGEKIDL--KNDVSALKRVGCCSS 217
>gi|296086163|emb|CBI31604.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 121/170 (71%), Positives = 142/170 (83%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+TL + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITKRQ+F+NV RWL ELR HAD NI+IM+ GNKSDL LRAV
Sbjct: 77 ITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIMMAGNKSDLNHLRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND 170
+DA+ AEKEGL F+ETSALE+ NVE AF T+L +IY I+SKKAL A +
Sbjct: 137 GDDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQE 186
>gi|401880969|gb|EJT45277.1| hypothetical protein A1Q1_06346 [Trichosporon asahii var. asahii
CBS 2479]
gi|406697082|gb|EKD00350.1| hypothetical protein A1Q2_05319 [Trichosporon asahii var. asahii
CBS 8904]
Length = 213
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 158/205 (77%), Gaps = 8/205 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 15 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL+ LRAV
Sbjct: 75 ITSAYYRGAVGALLVYDIAKHSTYENVTRWLKELRDHADANIVIMLVGNKSDLKHLRAVS 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDE--SESGGSS 178
TE+AK FA ++GL F+ETSAL+++NVE AF +LT+IYRIVS K+L ++ + SGG
Sbjct: 135 TEEAKAFATEQGLSFIETSALDASNVESAFQNILTDIYRIVSSKSLESSGDVIKPSGGE- 193
Query: 179 SLLKATNIVVPGQEPESGRRSYNCC 203
T +V P + ++ CC
Sbjct: 194 -----TILVTPTADDGGAKQGGKCC 213
>gi|384484908|gb|EIE77088.1| rab11 protein [Rhizopus delemar RA 99-880]
Length = 211
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 120/203 (59%), Positives = 156/203 (76%), Gaps = 6/203 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGK+ LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 15 LIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKMIKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K ++++V RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 75 ITSAYYRGAVGALLVYDISKHSTYESVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK+FA GL F+ETSAL++TNV+ +F +LTEIYRIVS KAL ES ++
Sbjct: 135 TDEAKQFASDNGLSFIETSALDATNVDQSFQQILTEIYRIVSNKAL------ESSNNTIK 188
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ ++ Q P+ + CC
Sbjct: 189 PTSGQTILVSQTPDEQTKQGGCC 211
>gi|209736178|gb|ACI68958.1| Ras-related protein Rab-11B [Salmo salar]
gi|221220258|gb|ACM08790.1| Ras-related protein Rab-11B [Salmo salar]
Length = 217
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 127/208 (61%), Positives = 157/208 (75%), Gaps = 10/208 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + +A+DES
Sbjct: 136 TDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRSAHDESPGNN- 194
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCCTS 205
+I VP + + CC S
Sbjct: 195 -----VVDISVP-PTTDGQKNKLPCCQS 216
>gi|15218719|ref|NP_174177.1| RAB GTPase-like protein A1I [Arabidopsis thaliana]
gi|75336857|sp|Q9S810.1|RAA1I_ARATH RecName: Full=Ras-related protein RABA1i; Short=AtRABA1i
gi|6560749|gb|AAF16749.1|AC010155_2 F3M18.2 [Arabidopsis thaliana]
gi|67633398|gb|AAY78624.1| putative Ras-related GTP-binding protein [Arabidopsis thaliana]
gi|332192870|gb|AEE30991.1| RAB GTPase-like protein A1I [Arabidopsis thaliana]
Length = 218
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 157/205 (76%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
L GDS VGKS LL+RF R++FS DS+ATIGVEF T+++ K VKAQIWDTAGQERYRA
Sbjct: 18 LTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D NI+IMLVGNK+DL LRA+
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRHLRAIS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK FAE+E FMETSALE+ NV+ AF VLT+IYR+VSKKAL A D+ +++L
Sbjct: 138 TEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSKKALEAGDDP----TTAL 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V G++ S + CC++
Sbjct: 194 PKGQMINVGGRDDISAVKKPGCCSA 218
>gi|325190342|emb|CCA24816.1| Rab11 family GTPase putative [Albugo laibachii Nc14]
Length = 216
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 154/205 (75%), Gaps = 7/205 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF L+SK+TIGVEF TK++V K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATKSIVAEGKTIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITK SF+NV RWL+ELR HAD N +IMLVGNKSDL LRAVP
Sbjct: 77 ITSAYYRGAVGALLVYDITKHVSFENVERWLKELREHADANTVIMLVGNKSDLRHLRAVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+A FAEK L F+ETSALE+ V+ AF +LTEIY+++S+K + A + S+
Sbjct: 137 TEEAMAFAEKNNLAFIETSALEAIGVDSAFQRILTEIYKLMSRKTMQAEE-----NQISI 191
Query: 181 LKATNIVVPGQEPESG--RRSYNCC 203
NIV+ + E G ++ +CC
Sbjct: 192 PSGDNIVITSDKTEEGVKKKKSSCC 216
>gi|392578458|gb|EIW71586.1| hypothetical protein TREMEDRAFT_42942 [Tremella mesenterica DSM
1558]
Length = 214
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 122/204 (59%), Positives = 158/204 (77%), Gaps = 6/204 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 15 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD+NI+IMLVGNKSDL+ LRAVP
Sbjct: 75 ITSAYYRGAVGALLVYDIAKHATYENVTRWLKELRDHADQNIVIMLVGNKSDLKHLRAVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL-TANDESESGGSSS 179
T++AK F+ + L F+ETSAL+++NVE AF +LT+IYRIVS KAL ++ D + G +
Sbjct: 135 TDEAKAFSTENNLSFIETSALDASNVESAFQNILTDIYRIVSSKALDSSGDVIKPAGGET 194
Query: 180 LLKATNIVVPGQEPESGRRSYNCC 203
+L V P + ++ CC
Sbjct: 195 IL-----VAPTADDGGAKQGSKCC 213
>gi|115439941|ref|NP_001044250.1| Os01g0750000 [Oryza sativa Japonica Group]
gi|14209558|dbj|BAB56054.1| GTP-binding protein GTP1 [Oryza sativa Japonica Group]
gi|32966065|gb|AAP92129.1| GTP-binding protein GTP1 [Oryza sativa]
gi|113533781|dbj|BAF06164.1| Os01g0750000 [Oryza sativa Japonica Group]
gi|125527712|gb|EAY75826.1| hypothetical protein OsI_03740 [Oryza sativa Indica Group]
gi|125572029|gb|EAZ13544.1| hypothetical protein OsJ_03460 [Oryza sativa Japonica Group]
gi|215765620|dbj|BAG87317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 221
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 126/205 (61%), Positives = 160/205 (78%), Gaps = 6/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EF L+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 23 LIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSIQVDGKVVKAQIWDTAGQERYRA 82
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+R +FDNVARWL+ELR H D +I++MLVGNKSDL L AV
Sbjct: 83 ITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDPSIVVMLVGNKSDLRHLVAVS 142
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED KE+AE E L FMETSAL++TNVE AF VLT+IY+ VSKK + A+D+ GS++
Sbjct: 143 TEDGKEYAEAESLYFMETSALDATNVENAFAEVLTQIYQTVSKKTVEASDD----GSNAP 198
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+K I V ++ S + CC++
Sbjct: 199 IKGEKINV--KDDVSALKRIGCCSN 221
>gi|449450768|ref|XP_004143134.1| PREDICTED: ras-related protein Rab11C-like [Cucumis sativus]
gi|449520383|ref|XP_004167213.1| PREDICTED: ras-related protein Rab11C-like [Cucumis sativus]
Length = 217
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 128/205 (62%), Positives = 158/205 (77%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF L+SK+TIGVEF TKTL + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQVEGKTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+TKRQ+F+NV RWL ELR HAD NI+I+++GNKSDL LR+V
Sbjct: 77 ITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVIVMIGNKSDLSHLRSVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
+D + AEKEGL F+ETSAL++TN++ AF T+LTEIY I+SKKAL A + + S
Sbjct: 137 EDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKKALAAQEAAASITHPG- 195
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ T I V +S RR CC+S
Sbjct: 196 -QGTTINVSDTSGDSNRR--GCCSS 217
>gi|357452099|ref|XP_003596326.1| Ras-related protein Rab-11B [Medicago truncatula]
gi|355485374|gb|AES66577.1| Ras-related protein Rab-11B [Medicago truncatula]
gi|388517873|gb|AFK46998.1| unknown [Medicago truncatula]
Length = 217
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 157/205 (76%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EF+L+SK+TIGVEF T+TL + K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D NI++MLVGNK+DL L AV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNIVVMLVGNKADLRHLVAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED K +AEKE L FMETSALE+TNVE AF VLT+IYRIVSKKA+ +E+G +S
Sbjct: 138 TEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYRIVSKKAVEG---AENGNASVP 194
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I + + S + CC+S
Sbjct: 195 AKGEKIDL--KNDVSALKRVGCCSS 217
>gi|148227083|ref|NP_001080132.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus laevis]
gi|27370881|gb|AAH41250.1| Rab11b protein [Xenopus laevis]
Length = 218
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 125/206 (60%), Positives = 153/206 (74%), Gaps = 9/206 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRG VGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGVVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + +A+DES
Sbjct: 136 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRSAHDESPGNN- 194
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCC 203
+I VP CC
Sbjct: 195 -----VVDISVPPTTDGQKSSKLQCC 215
>gi|54695940|gb|AAV38342.1| RAB11B, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 128/210 (60%), Positives = 157/210 (74%), Gaps = 17/210 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD +I+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSDIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + A+DES
Sbjct: 136 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGNN- 194
Query: 178 SSLLKATNIVVP----GQEPESGRRSYNCC 203
+I VP GQ+P CC
Sbjct: 195 -----VVDISVPPTTDGQKPN----KLQCC 215
>gi|47550807|ref|NP_999935.1| RAB11B, member RAS oncogene family, a [Danio rerio]
gi|29294722|gb|AAH48889.1| RAB11B, member RAS oncogene family [Danio rerio]
gi|182890202|gb|AAI65041.1| Rab11b protein [Danio rerio]
Length = 218
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 125/204 (61%), Positives = 154/204 (75%), Gaps = 5/204 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND-ESESGGSSS 179
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + ES G++
Sbjct: 136 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQMVDRPGHDESPGNN- 194
Query: 180 LLKATNIVVPGQEPESGRRSYNCC 203
+I VP + CC
Sbjct: 195 ---VVDISVPPTTDGLKGNKFQCC 215
>gi|395513434|ref|XP_003760929.1| PREDICTED: ras-related protein Rab-11B [Sarcophilus harrisii]
Length = 266
Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 126/206 (61%), Positives = 154/206 (74%), Gaps = 9/206 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 64 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 123
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 124 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVP 183
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + +A+DES
Sbjct: 184 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRSAHDESPGN-- 241
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCC 203
+I VP CC
Sbjct: 242 ----NVVDISVPPTTDGQKSNKLQCC 263
>gi|1370144|emb|CAA98178.1| RAB11B [Lotus japonicus]
Length = 242
Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 132/211 (62%), Positives = 165/211 (78%), Gaps = 5/211 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGK+Q+L+RFA++EF DSKATIGVEFQT+T+ I+ K +KAQIWDTAGQERYRA
Sbjct: 32 VIGDSAVGKTQILSRFAKNEFCFDSKATIGVEFQTRTVTINAKVIKAQIWDTAGQERYRA 91
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA+GAMLVYDITKRQSFD+VARW+EELR HAD +I+IML+GNK DL R V
Sbjct: 92 VTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIMLIGNKGDLVDQRVVL 151
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEI-YRIVSKKALT-ANDESESGGSS 178
+EDA EFAE++GL F ETSAL NVE AFL +L EI R+VSK++L+ N ++ G +
Sbjct: 152 SEDAVEFAEEQGLFFSETSALTGENVESAFLKLLQEINTRVVSKRSLSDCNHGKKTNGGN 211
Query: 179 SLLKATNIVVPGQEPE--SGRRSYNC-CTSS 206
SL + V+ G E E ++ +C C+SS
Sbjct: 212 SLKGSKIDVISGPELEITEVKKVPSCSCSSS 242
>gi|89258423|gb|ABD65435.1| Rab11 [Suberites domuncula]
Length = 217
Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 128/208 (61%), Positives = 159/208 (76%), Gaps = 8/208 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IM VGNK DL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMAVGNKCDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESG--GSS 178
TE+AK ++EK GL F+ETSAL+STNVE AF +LTEIY IVS+ + TAND + G
Sbjct: 136 TEEAKAYSEKNGLSFIETSALDSTNVETAFQNILTEIYHIVSQSS-TANDVPSAPELGER 194
Query: 179 SLLKATNIVVPGQEPESGRRSYNCCTSS 206
+ +K T Q+ SG+R CC S+
Sbjct: 195 TTIKPTE---GDQQQASGKR--QCCRSN 217
>gi|303742|dbj|BAA02112.1| GTP-binding protein [Pisum sativum]
gi|738936|prf||2001457D GTP-binding protein
Length = 217
Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 156/205 (76%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D NI++MLVGNK+DL LRAV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNKADLRHLRAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED+ FAE+E FMETSALES NVE AF VLT+IYR+VSKKAL D+ ++L
Sbjct: 138 TEDSTSFAEREHTFFMETSALESLNVESAFTEVLTQIYRVVSKKALEIGDD-----PAAL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V ++ S + CC++
Sbjct: 193 PKGQTINVGSRDDVSAVKKGGCCSA 217
>gi|763130|emb|CAA56176.1| YPT3 [Homo sapiens]
Length = 218
Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 128/210 (60%), Positives = 156/210 (74%), Gaps = 17/210 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYR
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRR 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + A+DES
Sbjct: 136 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGNN- 194
Query: 178 SSLLKATNIVVP----GQEPESGRRSYNCC 203
+I VP GQ+P CC
Sbjct: 195 -----VVDISVPPTTDGQKPN----KLQCC 215
>gi|308323189|gb|ADO28731.1| ras-related protein rab-11b [Ictalurus punctatus]
Length = 218
Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 125/206 (60%), Positives = 154/206 (74%), Gaps = 9/206 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIV +K + +A+DES
Sbjct: 136 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVPQKQIADRSAHDESPGNN- 194
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCC 203
+I VP + CC
Sbjct: 195 -----VVDISVPPTTDGLKGSKFQCC 215
>gi|112983314|ref|NP_001037618.1| ras-related GTP-binding protein Rab11 [Bombyx mori]
gi|102993180|gb|ABF71467.1| ras-related GTP-binding protein Rab11 [Bombyx mori]
Length = 213
Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 125/209 (59%), Positives = 153/209 (73%), Gaps = 18/209 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K S++NV RWL ELR HAD+NI+IMLVGNKSDL LR++P
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK FAE GL F+ETSAL+STNVE AF +LTEIYRIVS++ + E
Sbjct: 136 TEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQMRDPPEG-------- 187
Query: 181 LKATNIVVPGQEPESGRRSY------NCC 203
+++ P EP R S CC
Sbjct: 188 ----DVIRPDAEPADVRPSQADSVRRQCC 212
>gi|410921192|ref|XP_003974067.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
gi|47216650|emb|CAG04848.1| unnamed protein product [Tetraodon nigroviridis]
Length = 216
Score = 252 bits (644), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 126/206 (61%), Positives = 154/206 (74%), Gaps = 9/206 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + +A+DES
Sbjct: 136 TDEARVFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRSAHDESPGNN- 194
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCC 203
+I VP CC
Sbjct: 195 -----VVDISVPPTTDGQKGNKLQCC 215
>gi|357124167|ref|XP_003563776.1| PREDICTED: ras-related protein RIC2-like [Brachypodium distachyon]
Length = 217
Score = 252 bits (644), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 122/175 (69%), Positives = 146/175 (83%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T++L + K VKAQIWDTAGQERYRA
Sbjct: 19 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQERYRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+N RWL+ELR H D NI++MLVGNKSDL L AV
Sbjct: 79 ITSAYYRGAVGALLVYDVTRHATFENAERWLKELRDHTDPNIVVMLVGNKSDLRHLVAVQ 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESG 175
T++ K FAE+E L FMETSALESTNVE AF VLT+IYRIVSK+A+ A ++S SG
Sbjct: 139 TDEGKAFAERESLYFMETSALESTNVEDAFAEVLTQIYRIVSKRAVEAGEDSASG 193
>gi|255644522|gb|ACU22764.1| unknown [Glycine max]
Length = 195
Score = 252 bits (644), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 120/166 (72%), Positives = 142/166 (85%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF TK+L I K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDAKVIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+R +F+N ARWL+ELR H D NI++ML+GNKSDL L AVP
Sbjct: 78 ITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL 166
TED K FAEKE L FMETSALE+TNVE AF VL++IYRIVSK+ +
Sbjct: 138 TEDGKSFAEKESLYFMETSALEATNVENAFTEVLSQIYRIVSKRTV 183
>gi|21217443|gb|AAM33785.1| Rab11 [Periplaneta americana]
Length = 204
Score = 252 bits (644), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 118/166 (71%), Positives = 143/166 (86%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 4 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 63
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL ELR HAD+NI+IMLVGNKSDL LRAVP
Sbjct: 64 ITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 123
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL 166
T++AK FAE+ GL F+ETSAL+STNVE AF +LTEIYRIVS+K +
Sbjct: 124 TDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 169
>gi|67516131|ref|XP_657951.1| hypothetical protein AN0347.2 [Aspergillus nidulans FGSC A4]
gi|40746597|gb|EAA65753.1| hypothetical protein AN0347.2 [Aspergillus nidulans FGSC A4]
Length = 237
Score = 252 bits (644), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 126/198 (63%), Positives = 151/198 (76%), Gaps = 24/198 (12%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS GKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 21 LIGDSGTGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 80
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q++DNV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 81 ITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 140
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLT--------------------EIYRI 160
TE+AK+FA + L F+ETSAL+++NVELAF +LT EIYRI
Sbjct: 141 TEEAKQFASENNLSFIETSALDASNVELAFQNILTGIAPVGISKRRSLTAILFFVEIYRI 200
Query: 161 VSKKALTANDESESGGSS 178
VS KAL E ESGG+S
Sbjct: 201 VSSKAL----EGESGGAS 214
>gi|225712176|gb|ACO11934.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
Length = 216
Score = 252 bits (643), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 120/175 (68%), Positives = 145/175 (82%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL ELR HAD NI+IMLVGNK DL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVDRWLRELRDHADSNIVIMLVGNKCDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESG 175
T++AK FAE+ L F+ETSAL+STNVE AF +LTEIYRIVS+K+L + S +G
Sbjct: 136 TDEAKHFAEQNNLSFIETSALDSTNVETAFHNILTEIYRIVSRKSLPDSGNSGAG 190
>gi|387017948|gb|AFJ51092.1| RAB11a, member RAS oncogene family, like [Crotalus adamanteus]
Length = 217
Score = 252 bits (643), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 128/203 (63%), Positives = 155/203 (76%), Gaps = 4/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T+++ + +K VKAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++N WL+EL+ HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKYLTYENAECWLKELQDHADANIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK FAEK GL F+E SAL+STNVE AF +LTEIYRIVS++ L A + ES S
Sbjct: 136 TDEAKSFAEKNGLSFIEASALDSTNVEAAFHNILTEIYRIVSQRQL-AGGQPESEFSHGT 194
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
V+P Q+ G R CC
Sbjct: 195 TIEPIKVLPTQQ---GARETPCC 214
>gi|325191836|emb|CCA26309.1| Rab11 family GTPase putative [Albugo laibachii Nc14]
Length = 380
Score = 252 bits (643), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 154/205 (75%), Gaps = 7/205 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF L+SK+TIGVEF TK++V K +KAQIWDTAGQERYRA
Sbjct: 181 LIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATKSIVAEGKTIKAQIWDTAGQERYRA 240
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITK SF+NV RWL+ELR HAD N +IMLVGNKSDL LRAVP
Sbjct: 241 ITSAYYRGAVGALLVYDITKHVSFENVERWLKELREHADANTVIMLVGNKSDLRHLRAVP 300
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+A FAEK L F+ETSALE+ V+ AF +LTEIY+++S+K + A + S+
Sbjct: 301 TEEAMAFAEKNNLAFIETSALEAIGVDSAFQRILTEIYKLMSRKTMQAEE-----NQISI 355
Query: 181 LKATNIVVPGQEPESG--RRSYNCC 203
NIV+ + E G ++ +CC
Sbjct: 356 PSGDNIVITSDKTEEGVKKKKSSCC 380
>gi|449438915|ref|XP_004137233.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 217
Score = 252 bits (643), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 128/211 (60%), Positives = 156/211 (73%), Gaps = 17/211 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EF+L+SK+TIGVEF T+TL + K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+EL+ H D NI++MLVGNKSDL L AVP
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED K +AE+E L F+ETSALE+ NVE AF VLT+IY IVSKKA+ E GS+S
Sbjct: 138 TEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAV----EGGENGSAS- 192
Query: 181 LKATNIVVPGQ------EPESGRRSYNCCTS 205
VP Q + ESG CC+S
Sbjct: 193 ------AVPAQGEKINIKDESGLNRIKCCSS 217
>gi|388515945|gb|AFK46034.1| unknown [Lotus japonicus]
Length = 227
Score = 252 bits (643), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 126/207 (60%), Positives = 159/207 (76%), Gaps = 4/207 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
++GDS VGKSQLL RF R+EF + SKATIGVEF TKT+V+ HK VKAQIWDTAGQERY+A
Sbjct: 20 MVGDSGVGKSQLLNRFVRNEFQMKSKATIGVEFLTKTVVMDHKVVKAQIWDTAGQERYQA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T+AYYRGA GA+L YDIT RQSFD+V +WL+ELR HAD NII+MLVGNKSDL + RAVP
Sbjct: 80 ITTAYYRGATGALLAYDITNRQSFDHVEKWLDELRVHAD-NIIVMLVGNKSDLSSGRAVP 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+AK+FA+++GL F+ETSAL+S NVE AFL +L++IY V KK + A + +L
Sbjct: 139 MEEAKDFAKQKGLFFVETSALDSNNVESAFLGLLSQIYATVGKKHIIAEGAELNWDKVNL 198
Query: 181 -LKATNIVVPGQEPE--SGRRSYNCCT 204
L+ I V QE E +R ++CC+
Sbjct: 199 ELEGIKIKVSSQEAECQKAKRRFDCCS 225
>gi|356543002|ref|XP_003539952.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 252 bits (643), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 156/205 (76%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D NI+IMLVGNK+DL LRAV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRHLRAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T+DAK FAE+E FMETSALES NV+ AF VLT+IYR+VS+K L D+ ++L
Sbjct: 138 TDDAKAFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSRKTLEIGDD-----PAAL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V ++ S + CC++
Sbjct: 193 PKGQTINVGSRDDVSAVKKSGCCSA 217
>gi|225712522|gb|ACO12107.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
gi|290561260|gb|ADD38032.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
Length = 216
Score = 252 bits (643), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 120/175 (68%), Positives = 145/175 (82%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL ELR HAD NI+IMLVGNK DL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVDRWLRELRDHADSNIVIMLVGNKCDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESG 175
T++AK FAE+ L F+ETSAL+STNVE AF +LTEIYRIVS+K+L + S +G
Sbjct: 136 TDEAKHFAEQNNLSFIETSALDSTNVETAFHNILTEIYRIVSQKSLPDSGNSGAG 190
>gi|427786917|gb|JAA58910.1| Putative ras-related protein rab-11a [Rhipicephalus pulchellus]
Length = 217
Score = 251 bits (642), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 120/203 (59%), Positives = 156/203 (76%), Gaps = 3/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + +K VKAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+EL+ HAD+NI+IMLVGNK+DL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELKDHADQNIVIMLVGNKNDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK FAEK L F+ETSAL+STNVE AF +LT+IY IVS+K + + +++ S
Sbjct: 136 TDEAKAFAEKNKLSFIETSALDSTNVEAAFHQILTDIYHIVSQKQIRSEGDNDPSPSRDN 195
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ I + +P R+ C
Sbjct: 196 IP---ITIAPTDPTDNRKKSCAC 215
>gi|449459304|ref|XP_004147386.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|449500802|ref|XP_004161198.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
Length = 218
Score = 251 bits (642), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 126/205 (61%), Positives = 154/205 (75%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EFSL+SK+TIGVEF T++L + K VKAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDGKVVKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL ELR H D NI++MLVGNKSDL L AV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDLRHLVAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED K FAEKE L FMETSALE+TNVE +F VLT+IY IVSKKA+ A D G +++
Sbjct: 138 TEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSKKAMEAGD----GTAAAS 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ + + S + CC+S
Sbjct: 194 VPPKGEKIDVSKDVSAVKKAGCCSS 218
>gi|413946075|gb|AFW78724.1| ras protein RIC2 [Zea mays]
Length = 220
Score = 251 bits (642), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 161/205 (78%), Gaps = 6/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EFSL+SK+TIGVEF T++L + K +KAQIWDTAGQERYRA
Sbjct: 22 LIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQIWDTAGQERYRA 81
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+R +FDNV RWL ELR H D++I++MLVGNKSDL L AV
Sbjct: 82 ITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDQSIVVMLVGNKSDLRHLVAVS 141
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T+DAKEFAE E + FMETSAL++TNV+ +F VLT+IY+IVSKK + A++E G+++
Sbjct: 142 TDDAKEFAEAESMYFMETSALDATNVDSSFSEVLTQIYQIVSKKTVEASEE----GAAAP 197
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V ++ S + CC++
Sbjct: 198 GKGEKINV--KDDVSAMKRVGCCSN 220
>gi|334261577|gb|AEG74029.1| Rab protein [Pellia endiviifolia (species B)]
Length = 217
Score = 251 bits (642), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 125/206 (60%), Positives = 155/206 (75%), Gaps = 6/206 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDSKLIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDIT+ +F+NV RWL+EL+ H D NI++MLVGNKS L LRAV
Sbjct: 77 ITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVVMLVGNKSVLRHLRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL-TANDESESGGSSS 179
+D + F+EKEGL FMETSALESTNVE AF +LT+IYR+VSKKAL D S G
Sbjct: 137 ADDGQSFSEKEGLFFMETSALESTNVENAFKQILTQIYRVVSKKALDVGEDPSAVPG--- 193
Query: 180 LLKATNIVVPGQEPESGRRSYNCCTS 205
K I V ++ + + CC++
Sbjct: 194 --KGQTISVGNKDDVTATKKVGCCSA 217
>gi|226500010|ref|NP_001149955.1| LOC100283582 [Zea mays]
gi|195635711|gb|ACG37324.1| ras-related protein RIC2 [Zea mays]
Length = 217
Score = 251 bits (642), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 157/205 (76%), Gaps = 6/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T++L + K VKAQIWDTAGQERYRA
Sbjct: 19 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQERYRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D NI++MLVGNKSDL L AV
Sbjct: 79 ITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDLRHLVAVQ 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++ K FAE+E L FMETSALESTNVE AF VL +IYRIVSK+A+ A +++ SG
Sbjct: 139 TDEGKAFAERESLYFMETSALESTNVENAFAEVLAQIYRIVSKRAVEAGEDAASGPGRG- 197
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ NI ++ S + CC+S
Sbjct: 198 -EKINI----KDDVSAVKKGGCCSS 217
>gi|301088725|ref|XP_002894778.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
gi|262108813|gb|EEY66865.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
Length = 218
Score = 251 bits (642), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 124/206 (60%), Positives = 155/206 (75%), Gaps = 7/206 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF TK++V K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIVAEGKTIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITK +F+NV RWL+ELR HAD N +IMLVGNKSDL LRAV
Sbjct: 77 ITSAYYRGAVGALLVYDITKHGTFENVERWLKELRDHADANTVIMLVGNKSDLRHLRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+A FAEK L F+ETSALE+T V+ AF +LTEIY+++S+K + A E S+SL
Sbjct: 137 TEEAMAFAEKNNLAFIETSALEATGVDSAFQRILTEIYKLMSRKTIQA----EENASASL 192
Query: 181 LKATNIVVPGQ---EPESGRRSYNCC 203
+I + + E + ++ CC
Sbjct: 193 PTGNSIAITAENTTESQKKKKKSGCC 218
>gi|67078858|gb|AAY64453.1| small GTPase rab11-3 [Gracilaria lemaneiformis]
Length = 214
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 126/205 (61%), Positives = 157/205 (76%), Gaps = 8/205 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGD+ VGKS LL+RF R+EFSL+SK+TIGVEF T+++ K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITK+ SFDNV RWL+EL+ HAD NI+IMLVGNKSDL+ L+AV
Sbjct: 76 ITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLVGNKSDLQHLKAVT 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T+DA FAE GL F+ETSAL+++NVE AF ++L+EIYR+ SKKAL E G +S+
Sbjct: 136 TDDASAFAESNGLSFIETSALDNSNVEEAFRSILSEIYRLGSKKAL------EKGSTSNF 189
Query: 181 L-KATNIVVPGQEPESGR-RSYNCC 203
AT +V + G+ CC
Sbjct: 190 APNATQTIVINPPADEGKTEKAKCC 214
>gi|449433734|ref|XP_004134652.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|449479217|ref|XP_004155538.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|307136190|gb|ADN34029.1| GTP-binding protein [Cucumis melo subsp. melo]
Length = 218
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 156/205 (76%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EFSL+SK+TIGVEF T++L + K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +++NV +WL+ELR H D NI++MLVGNKSDL L AV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSDLRHLVAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAK FAE E L FMETSALE+TNV+ AF VLT+IY IVSKKA+ ND ++ S+ +
Sbjct: 138 TEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAMETND--DAAASAVI 195
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I + E + CC+S
Sbjct: 196 AKGEKIDISKDVSEVKKG--GCCSS 218
>gi|308322801|gb|ADO28538.1| ras-related protein rab-11b [Ictalurus punctatus]
Length = 218
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 125/206 (60%), Positives = 153/206 (74%), Gaps = 9/206 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ETSAL+S NVE AF +LTEIYRIVS+K + +A+DES
Sbjct: 136 TDEARAFAEKNNLSFIETSALDSANVEEAFKNILTEIYRIVSQKQIADRSAHDESPGNN- 194
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCC 203
+I VP CC
Sbjct: 195 -----VVDISVPPTTDGQKGSKLQCC 215
>gi|195452940|ref|XP_002073567.1| GK14185 [Drosophila willistoni]
gi|194169652|gb|EDW84553.1| GK14185 [Drosophila willistoni]
Length = 214
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 119/173 (68%), Positives = 145/173 (83%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL ELR HAD+NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESE 173
T++AK FAE+ GL F+ETSAL+STNVE AF +LTEIYRIVS+K + E +
Sbjct: 136 TDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPEGD 188
>gi|332373948|gb|AEE62115.1| unknown [Dendroctonus ponderosae]
Length = 215
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 125/207 (60%), Positives = 158/207 (76%), Gaps = 12/207 (5%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T+AYYRGAVGA+LVYDI K +++NV RWL ELR HAD+NI+IMLVGNKSDL LRAV
Sbjct: 76 ITAAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVL 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK FAE+ GL F+ETSAL+STNV+LAF +LTEIYRIVS+K + E ++
Sbjct: 136 TEEAKAFAERNGLSFIETSALDSTNVDLAFQNILTEIYRIVSQKQIRDPPEGDT------ 189
Query: 181 LKATNI----VVPGQEPESGRRSYNCC 203
++ N+ V P +S R+ CC
Sbjct: 190 IRPQNVEPIDVKPTMSSDSVRK--QCC 214
>gi|15232652|ref|NP_190267.1| Ras-related protein RABA2c [Arabidopsis thaliana]
gi|297819266|ref|XP_002877516.1| hypothetical protein ARALYDRAFT_485055 [Arabidopsis lyrata subsp.
lyrata]
gi|3915842|sp|Q96283.4|RAA2C_ARATH RecName: Full=Ras-related protein RABA2c; Short=AtRABA2c; AltName:
Full=Ras-related protein Rab11A; Short=AtRab11A
gi|2598229|emb|CAA70112.1| Rab11 protein [Arabidopsis thaliana]
gi|5541676|emb|CAB51182.1| Rab11 protein [Arabidopsis thaliana]
gi|17529190|gb|AAL38821.1| putative GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|20465471|gb|AAM20195.1| putative GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|21593047|gb|AAM64996.1| GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|297323354|gb|EFH53775.1| hypothetical protein ARALYDRAFT_485055 [Arabidopsis lyrata subsp.
lyrata]
gi|332644688|gb|AEE78209.1| Ras-related protein RABA2c [Arabidopsis thaliana]
Length = 217
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 130/211 (61%), Positives = 154/211 (72%), Gaps = 16/211 (7%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+T + K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITKRQ+FDNV RWL ELR HAD NI+IM+ GNKSDL LR+V
Sbjct: 77 ITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRSVA 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
ED + AEKEGL F+ETSALE+TNVE AF T+L EIY I+SKKAL ++
Sbjct: 137 EEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKKAL----------AAQE 186
Query: 181 LKATNIVVPGQ------EPESGRRSYNCCTS 205
A N +PGQ + SG CC+S
Sbjct: 187 AAAANSAIPGQGTTINVDDTSGGAKRACCSS 217
>gi|350537783|ref|NP_001233798.1| Rab11 GTPase [Solanum lycopersicum]
gi|6688535|emb|CAB65172.1| Rab11 GTPase [Solanum lycopersicum]
Length = 218
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 156/205 (76%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EF+L+SK+TIGVEF TK+L I K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDGKVIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T AYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D NI++ML+GNKSDL L AV
Sbjct: 78 ITIAYYRGAVGALLVYDVTRHVTFENVNRWLKELRDHTDPNIVVMLLGNKSDLRHLVAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK AE+E L FMETSALE+TNVE AF LT+IYRIVSKKA+ A DE + +
Sbjct: 138 TEEAKSLAEREALYFMETSALEATNVENAFTEALTQIYRIVSKKAVEAGDEGATSTAPPK 197
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ NI ++ S + + CC+S
Sbjct: 198 GQTINI----KDEGSAWKKFGCCSS 218
>gi|47216652|emb|CAG04850.1| unnamed protein product [Tetraodon nigroviridis]
Length = 217
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 123/205 (60%), Positives = 158/205 (77%), Gaps = 3/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K ++ E +++
Sbjct: 136 TDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQISDRSGHEESPGNNV 195
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ + + P + + G + CC S
Sbjct: 196 VDIS--LPPTTDSQRGGK-LPCCQS 217
>gi|351722287|ref|NP_001235959.1| GTP-binding protein [Glycine max]
gi|22597170|gb|AAN03472.1| GTP-binding protein [Glycine max]
Length = 217
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 157/205 (76%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EF+L+SK+TIGVEF T+TL + K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLDVDSKVIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T++ +F+NV RWL+ELR H D NI++MLVGNKSDL L AV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRQATFENVDRWLKELRNHTDANIVVMLVGNKSDLRHLVAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED K +AEKE L FMETSALE+TNVE AF VLT+IY IVSKKA+ +E+G +S
Sbjct: 138 TEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSKKAVEV---AENGTTSVP 194
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I + + S + CC+S
Sbjct: 195 AKGEKIDL--KNDVSALKRVGCCSS 217
>gi|357474509|ref|XP_003607539.1| GTP-binding protein ras-like protein [Medicago truncatula]
gi|355508594|gb|AES89736.1| GTP-binding protein ras-like protein [Medicago truncatula]
Length = 217
Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 123/205 (60%), Positives = 156/205 (76%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D NI+IMLVGNK+DL LRAV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRHLRAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T+DAK FAE+E FMETSALES NV+ +F VLT+IYR+VS+K L D+ ++L
Sbjct: 138 TDDAKAFAERENTFFMETSALESLNVDNSFTEVLTQIYRVVSRKTLEIGDD-----PAAL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V ++ S + CC++
Sbjct: 193 PKGQTINVGSRDDVSAVKKVGCCSA 217
>gi|60460508|gb|AAX20384.1| small GTPase [Gracilariopsis lemaneiformis]
gi|65306620|gb|AAY41883.1| small GTPase Rab11 [Gracilaria lemaneiformis]
Length = 215
Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 126/205 (61%), Positives = 157/205 (76%), Gaps = 8/205 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGD+ VGKS LL+RF R+EFSL+SK+TIGVEF T+++ K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITK+ SFDNV RWL+EL+ HAD NI+IMLVGNKSDL+ L+AV
Sbjct: 77 ITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLVGNKSDLQHLKAVT 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T+DA FAE GL F+ETSAL+++NVE AF ++L+EIYR+ SKKAL E G +S+
Sbjct: 137 TDDASAFAESNGLSFIETSALDNSNVEEAFRSILSEIYRLGSKKAL------EKGSTSNF 190
Query: 181 L-KATNIVVPGQEPESGR-RSYNCC 203
AT +V + G+ CC
Sbjct: 191 APNATQTIVINPPADEGKTEKAKCC 215
>gi|390598603|gb|EIN08001.1| GTPase [Punctularia strigosozonata HHB-11173 SS5]
Length = 213
Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/203 (60%), Positives = 154/203 (75%), Gaps = 4/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 15 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTIKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T+AYYRGAVGA+LVYDITK S+ NV RWL+ELR HAD NI+IMLVGNKSDL+ LRAVP
Sbjct: 75 ITAAYYRGAVGALLVYDITKHGSYTNVTRWLKELRDHADANIVIMLVGNKSDLKHLRAVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK F+ + GL F+ETSAL++TNVE AF T LT+IYRIVS++ L N + +
Sbjct: 135 TDEAKAFSTENGLSFIETSALDATNVESAFQTTLTDIYRIVSRQTLEQNADPIKPPTGD- 193
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
T + P + + S CC
Sbjct: 194 ---TRTINPSVDNSASAPSGKCC 213
>gi|358248878|ref|NP_001239700.1| uncharacterized protein LOC100787725 [Glycine max]
gi|255639774|gb|ACU20180.1| unknown [Glycine max]
Length = 236
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 123/196 (62%), Positives = 156/196 (79%), Gaps = 2/196 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGK+Q+L+RFA++EF DSK+TIGVEFQT+T+ I+ K +KAQIWDTAGQERYRA
Sbjct: 29 VIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTRTVTINGKVIKAQIWDTAGQERYRA 88
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA+GAMLVYDI+KRQSFD+VARW++ELR HAD +I+IML+GNK DL R V
Sbjct: 89 VTSAYYRGALGAMLVYDISKRQSFDHVARWVDELRAHADSSIVIMLIGNKGDLVDQRVVH 148
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL-TANDESESGGSSS 179
EDA EFAE +GL F ETSAL NVE AF +L EI+R++SK++L N ++ + + +
Sbjct: 149 AEDAVEFAEDQGLFFSETSALSGENVESAFFKLLEEIHRVISKRSLECGNGKANADNNLA 208
Query: 180 LLKATNI-VVPGQEPE 194
LK + I V+ G E E
Sbjct: 209 TLKGSKIDVISGAELE 224
>gi|353239723|emb|CCA71622.1| probable GTP-binding protein Rab11 [Piriformospora indica DSM
11827]
Length = 268
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/180 (67%), Positives = 145/180 (80%), Gaps = 2/180 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 15 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSINVDGKTVKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K ++ NV RWL+ELR HAD NI+IMLVGNKSDL+ LRAVP
Sbjct: 75 ITSAYYRGAVGALLVYDIAKHSTYTNVTRWLKELRDHADSNIVIMLVGNKSDLKHLRAVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDE--SESGGSS 178
T++AK F+ GL F+ETSAL+ NVE AF +LT+IYRIVS KAL A + SGG S
Sbjct: 135 TDEAKAFSADNGLSFIETSALDGGNVEAAFQNILTDIYRIVSNKALEAAPDVIKPSGGES 194
>gi|356517446|ref|XP_003527398.1| PREDICTED: ras-related protein RABA1f-like isoform 1 [Glycine max]
gi|356517448|ref|XP_003527399.1| PREDICTED: ras-related protein RABA1f-like isoform 2 [Glycine max]
Length = 217
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 155/205 (75%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D NI+IMLVGNK+DL LRAV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRHLRAVA 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T DAK FAE+E FMETSALES NV+ AF VLT+IYR+VS+K L D+ ++L
Sbjct: 138 TNDAKAFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSRKTLEIGDD-----PAAL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V ++ S + CC++
Sbjct: 193 PKGQTINVGSRDDVSAVKKSGCCSA 217
>gi|164662859|ref|XP_001732551.1| hypothetical protein MGL_0326 [Malassezia globosa CBS 7966]
gi|159106454|gb|EDP45337.1| hypothetical protein MGL_0326 [Malassezia globosa CBS 7966]
Length = 213
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 153/205 (74%), Gaps = 8/205 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS GKS LL+RF R+EFSLDS++TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 15 LIGDSGTGKSNLLSRFTRNEFSLDSRSTIGVEFATRSINVDGKTIKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K ++ NV+RWL+ELR HAD NI++MLVGNKSDL LRAVP
Sbjct: 75 ITSAYYRGAVGALLVYDIAKHSTYVNVSRWLKELRDHADSNIVVMLVGNKSDLRHLRAVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDE--SESGGSS 178
TE+AK FA + L F+ETSAL+++NVE AF +LTEIY IVS KAL ++D+ SGG
Sbjct: 135 TEEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYHIVSNKALQSSDDVIKPSGGE- 193
Query: 179 SLLKATNIVVPGQEPESGRRSYNCC 203
T V P + + CC
Sbjct: 194 -----TISVQPSTDDGGQTKKGGCC 213
>gi|348674018|gb|EGZ13837.1| hypothetical protein PHYSODRAFT_513156 [Phytophthora sojae]
Length = 218
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 123/206 (59%), Positives = 155/206 (75%), Gaps = 7/206 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF TK++V K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIVAEGKTIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITK +F+NV RWL+ELR HAD N +IMLVGNKSDL LRAV
Sbjct: 77 ITSAYYRGAVGALLVYDITKHGTFENVERWLKELRDHADANTVIMLVGNKSDLRHLRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+A FAEK L F+ETSALE+T V+ AF +LTEIY+++S+K + A E ++SL
Sbjct: 137 TEEAMAFAEKNNLAFIETSALEATGVDTAFQRILTEIYKLMSRKTIQA----EENATASL 192
Query: 181 LKATNIVVPGQ---EPESGRRSYNCC 203
+I + + E + ++ CC
Sbjct: 193 PTGNSIAITAENTTESQKKKKKSGCC 218
>gi|52345666|ref|NP_001004880.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus (Silurana)
tropicalis]
gi|49671143|gb|AAH75268.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus (Silurana)
tropicalis]
Length = 218
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 157/205 (76%), Gaps = 7/205 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAEK L F+ETSAL+STNVE +F +LTEIYRIVS+K + E +++
Sbjct: 136 TDEARAFAEKNNLSFIETSALDSTNVEESFKNILTEIYRIVSQKQMADRAAHEDSPGNNV 195
Query: 181 LKATNIVVPGQEPESGRRS--YNCC 203
+ + V P + G+RS CC
Sbjct: 196 VDIS--VTPTMD---GQRSIKLQCC 215
>gi|15237828|ref|NP_200723.1| RAB GTPase homolog A2D [Arabidopsis thaliana]
gi|75170819|sp|Q9FIF9.1|RAA2D_ARATH RecName: Full=Ras-related protein RABA2d; Short=AtRABA2d
gi|13877729|gb|AAK43942.1|AF370127_1 putative GTP-binding protein rab11 [Arabidopsis thaliana]
gi|9759237|dbj|BAB09761.1| GTP-binding protein rab11 [Arabidopsis thaliana]
gi|14532854|gb|AAK64109.1| putative GTP-binding protein rab11 [Arabidopsis thaliana]
gi|332009766|gb|AED97149.1| RAB GTPase homolog A2D [Arabidopsis thaliana]
Length = 217
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/211 (61%), Positives = 154/211 (72%), Gaps = 16/211 (7%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGK+ +L+RF R+EF L+SK+TIGVEF T+TL + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITKRQ+FDNV RWL ELR HAD NI+IM+ GNK+DL LR+V
Sbjct: 77 ITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKADLNHLRSVA 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
ED + AE EGL F+ETSALE+TNVE AF TVL EIY I+SKKAL ++
Sbjct: 137 EEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKKAL----------AAQE 186
Query: 181 LKATNIVVPGQ------EPESGRRSYNCCTS 205
A N +PGQ E SG CC++
Sbjct: 187 AAAANSAIPGQGTTINVEDTSGAGKRGCCST 217
>gi|432855565|ref|XP_004068250.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 157/205 (76%), Gaps = 3/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS++ + + +++
Sbjct: 136 TDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQRQIADRSAHDDSPGNNV 195
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ + V P + + G + CC S
Sbjct: 196 VDIS--VPPTMDGQRGNK-LPCCQS 217
>gi|148236881|ref|NP_001088852.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus laevis]
gi|56540960|gb|AAH87498.1| LOC496163 protein [Xenopus laevis]
Length = 218
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 157/205 (76%), Gaps = 7/205 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAEK L F+ETSAL+STNVE +F +LTEIYRIVS+K + E +++
Sbjct: 136 TDEARAFAEKNNLSFIETSALDSTNVEESFKNILTEIYRIVSQKQMADRAAHEDSPGNNV 195
Query: 181 LKATNIVVPGQEPESGRRS--YNCC 203
+ + V P + G+RS CC
Sbjct: 196 VDIS--VTPTMD---GQRSVKLQCC 215
>gi|345568399|gb|EGX51293.1| hypothetical protein AOL_s00054g363 [Arthrobotrys oligospora ATCC
24927]
Length = 209
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/203 (61%), Positives = 157/203 (77%), Gaps = 7/203 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF++DSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNMDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAV
Sbjct: 74 ITSAYYRGAVGALLVYDISKHITYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRAVT 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK FA + L F+ETSAL+++NVELAF +LTEIYRIVS K L E+E GGS
Sbjct: 134 TDEAKAFAAENHLSFIETSALDASNVELAFQNILTEIYRIVSSKVLP---ENEHGGS--- 187
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ I + Q P++ + CC
Sbjct: 188 IPDRGIPLSDQ-PKNDQGGGKCC 209
>gi|255563016|ref|XP_002522512.1| protein with unknown function [Ricinus communis]
gi|223538203|gb|EEF39812.1| protein with unknown function [Ricinus communis]
Length = 217
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 123/205 (60%), Positives = 155/205 (75%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D NI+IMLVGNK+DL LRA+
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRHLRAIT 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
EDA FA+++ FMETSALES NVE AF VLT+IYR+VS+KAL D+ ++L
Sbjct: 138 IEDATAFAQRQNTFFMETSALESMNVENAFTEVLTQIYRVVSRKALDIGDD-----PAAL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ I V ++ S + CC+S
Sbjct: 193 PRGQTINVGSRDDVSAVKKAGCCSS 217
>gi|410921188|ref|XP_003974065.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
Length = 218
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 128/210 (60%), Positives = 157/210 (74%), Gaps = 13/210 (6%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGG- 176
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + + +DES
Sbjct: 136 TDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQISDRSGHDESPGNNV 195
Query: 177 -SSSLLKATNIVVPGQEPESGRRSYNCCTS 205
SL T+ G+ P CC S
Sbjct: 196 VDISLPPTTDSQRGGKLP--------CCQS 217
>gi|255642121|gb|ACU21326.1| unknown [Glycine max]
Length = 217
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 123/205 (60%), Positives = 156/205 (76%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV +WL+ELR H D NI+IMLVGNK+DL LRAV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHVTFENVEKWLKELRDHTDANIVIMLVGNKADLRHLRAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T+DAK FAE+E FMETSALES NV+ AF VLT+IYR+VS+K L D+ ++L
Sbjct: 138 TDDAKAFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSRKTLEIGDD-----PAAL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V ++ S + CC++
Sbjct: 193 PKGQTINVGSRDDVSAVKKSGCCSA 217
>gi|51243763|gb|AAT99574.1| rab GTP-binding protein [Triticum aestivum]
Length = 216
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 154/205 (75%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL RF R+EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYD+T+ +F+NV RWL+EL+ H D NI+IMLVGNK+DL LRAV
Sbjct: 77 ITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANIVIMLVGNKADLRHLRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
EDAK FAE+E FMETSALES NVE AF VLT+IYR+VSKKAL D+ ++
Sbjct: 137 VEDAKAFAEREYTFFMETSALESMNVEDAFTEVLTQIYRVVSKKALDIGDD-----PAAP 191
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ I V ++ S + CC+S
Sbjct: 192 PRGQTINVGSKDDVSAVKKAGCCSS 216
>gi|118484551|gb|ABK94149.1| unknown [Populus trichocarpa]
Length = 218
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 153/205 (74%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T++L + K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDSKVIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL ELR H D NI++ML+GNKSDL L AV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED K FAE+E L FMETSALE+TNV+ AF VL +IY IVSKKA+ D + + S
Sbjct: 138 TEDGKSFAERESLYFMETSALEATNVDNAFAEVLNQIYSIVSKKAMETGDNAAASAVPS- 196
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V + S ++ CC+S
Sbjct: 197 -KGEKIDV--NKDVSAKKRVGCCSS 218
>gi|195498398|ref|XP_002096506.1| GE25707 [Drosophila yakuba]
gi|194182607|gb|EDW96218.1| GE25707 [Drosophila yakuba]
Length = 288
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 117/166 (70%), Positives = 143/166 (86%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 90 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRA 149
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL ELR HAD+NI+IMLVGNKSDL LR+VP
Sbjct: 150 ITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRSVP 209
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL 166
T++AK FAE+ GL F+ETSAL+STNVE AF +LTEIYRIVS+K +
Sbjct: 210 TDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 255
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 34/38 (89%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTL 38
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI 53
>gi|225434794|ref|XP_002282136.1| PREDICTED: ras-related protein Rab2BV [Vitis vinifera]
gi|147777473|emb|CAN62732.1| hypothetical protein VITISV_031984 [Vitis vinifera]
Length = 217
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 119/164 (72%), Positives = 138/164 (84%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+TL I K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIDGKTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITKRQ+FDNV RWL ELR HAD NI+IM+ GNK DL+ LRAV
Sbjct: 77 ITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKCDLKHLRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKK 164
ED + AE+E L F+ETSALE+TN+E AF T+LTEIY I+SKK
Sbjct: 137 EEDGQGLAEREELSFLETSALEATNIEKAFQTILTEIYHIISKK 180
>gi|297796867|ref|XP_002866318.1| hypothetical protein ARALYDRAFT_919138 [Arabidopsis lyrata subsp.
lyrata]
gi|297312153|gb|EFH42577.1| hypothetical protein ARALYDRAFT_919138 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 119/164 (72%), Positives = 137/164 (83%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+TL + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITKRQ+FDNV RWL ELR HAD NI+IM+ GNK+DL LR+V
Sbjct: 77 ITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKADLNHLRSVA 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKK 164
ED + AE EGL F+ETSALE+TNVE AF TVL EIY I+SKK
Sbjct: 137 EEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180
>gi|17137216|ref|NP_477170.1| Rab11, isoform B [Drosophila melanogaster]
gi|19549675|ref|NP_599137.1| Rab11, isoform A [Drosophila melanogaster]
gi|125776219|ref|XP_001359206.1| GA19116 [Drosophila pseudoobscura pseudoobscura]
gi|194899580|ref|XP_001979337.1| GG24366 [Drosophila erecta]
gi|195037917|ref|XP_001990407.1| GH18257 [Drosophila grimshawi]
gi|195107587|ref|XP_001998390.1| GI23656 [Drosophila mojavensis]
gi|195152035|ref|XP_002016944.1| GL21786 [Drosophila persimilis]
gi|195355578|ref|XP_002044268.1| GM15065 [Drosophila sechellia]
gi|195388968|ref|XP_002053150.1| GJ23499 [Drosophila virilis]
gi|2313039|dbj|BAA21708.1| rab11 [Drosophila melanogaster]
gi|6517204|dbj|BAA87880.1| Drab11 [Drosophila melanogaster]
gi|7300703|gb|AAF55850.1| Rab11, isoform A [Drosophila melanogaster]
gi|17944208|gb|AAL47999.1| GM06568p [Drosophila melanogaster]
gi|21064359|gb|AAM29409.1| RE11886p [Drosophila melanogaster]
gi|23171847|gb|AAN13849.1| Rab11, isoform B [Drosophila melanogaster]
gi|54638949|gb|EAL28351.1| GA19116 [Drosophila pseudoobscura pseudoobscura]
gi|190651040|gb|EDV48295.1| GG24366 [Drosophila erecta]
gi|193894603|gb|EDV93469.1| GH18257 [Drosophila grimshawi]
gi|193914984|gb|EDW13851.1| GI23656 [Drosophila mojavensis]
gi|194112001|gb|EDW34044.1| GL21786 [Drosophila persimilis]
gi|194129569|gb|EDW51612.1| GM15065 [Drosophila sechellia]
gi|194151236|gb|EDW66670.1| GJ23499 [Drosophila virilis]
gi|220943114|gb|ACL84100.1| CG5771-PA [synthetic construct]
gi|220953258|gb|ACL89172.1| Rab11-PA [synthetic construct]
Length = 214
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 118/173 (68%), Positives = 145/173 (83%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL ELR HAD+NI+IMLVGNKSDL LR+VP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRSVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESE 173
T++AK FAE+ GL F+ETSAL+STNVE AF +LTEIYRIVS+K + E +
Sbjct: 136 TDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPEGD 188
>gi|213515102|ref|NP_001133884.1| Ras-related protein Rab-11B [Salmo salar]
gi|209155688|gb|ACI34076.1| Ras-related protein Rab-11B [Salmo salar]
Length = 217
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 126/208 (60%), Positives = 157/208 (75%), Gaps = 10/208 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKMIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAEK L F+ETSAL+STNVE AF +LTEI+RIVS+K + +A+DES
Sbjct: 136 TDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIHRIVSQKQIADRSAHDESPGNN- 194
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCCTS 205
+I VP + + CC S
Sbjct: 195 -----VVDISVP-PTTDGQKNKLPCCQS 216
>gi|410927430|ref|XP_003977150.1| PREDICTED: ras-related protein Rab-11A-like [Takifugu rubripes]
Length = 215
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/206 (59%), Positives = 155/206 (75%), Gaps = 6/206 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 15 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKVEGKTVKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++N RWL+EL+ HAD NI+IMLVGNKSDL LRAVP
Sbjct: 75 ITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGNKSDLRHLRAVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
++A+ FAEK GL F+ETSAL+S+NVELAF T+LT IY IVS++ ++ +S+
Sbjct: 135 IDEARAFAEKYGLSFLETSALDSSNVELAFHTILTAIYNIVSQRQMSGRSDSD------F 188
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
A+N+V EP + C S
Sbjct: 189 SPASNVVPITVEPTQTLSNKGVCCQS 214
>gi|357147666|ref|XP_003574433.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 154/205 (75%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL RF R+EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYD+T+ +F+NV RWL+EL+ H D NI+IMLVGNK+DL LRAVP
Sbjct: 77 ITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANIVIMLVGNKADLRHLRAVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
EDAK FAE+E F ETSALE+ NVE AF VLT+IYR+VSKKAL D+ ++
Sbjct: 137 VEDAKAFAEREYTYFTETSALEAMNVEDAFTEVLTQIYRVVSKKALDIGDD-----PAAP 191
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ I V ++ S + CC+S
Sbjct: 192 PRGQTINVGSKDDVSAVKKAGCCSS 216
>gi|357132552|ref|XP_003567893.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 154/205 (75%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL RF R+EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYD+T+ +F+NV RWL EL+ H D NI+IMLVGNK+DL LRAV
Sbjct: 77 ITSAYYRGAVGALVVYDVTRHVTFENVERWLRELKDHTDANIVIMLVGNKADLRHLRAVQ 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
+EDAK FAE+E FMETSALE+ NVE AF VL++IYR+VSKKAL D+ ++
Sbjct: 137 SEDAKAFAERENTFFMETSALEAMNVEDAFTEVLSQIYRVVSKKALDIGDD-----PAAP 191
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V ++ S + CC+S
Sbjct: 192 PKGKTISVGSKDDVSAVKKSACCSS 216
>gi|297851308|ref|XP_002893535.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339377|gb|EFH69794.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 218
Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 156/205 (76%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
L GDS VGKS LL+RF R++FS DS+ATIGVEF T+++ K VKAQIWDTAGQERYRA
Sbjct: 18 LTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D NI+IMLVGNK+DL LRA+
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRHLRAIS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK FAE+E FMETSALE+ NV+ AF VLT+IYR+VSKKAL A D+ +++L
Sbjct: 138 TEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSKKALEAGDDP----TTAL 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V ++ S + CC++
Sbjct: 194 PKGQMINVGSRDDISAVKKPGCCSA 218
>gi|388514165|gb|AFK45144.1| unknown [Lotus japonicus]
Length = 242
Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 127/196 (64%), Positives = 156/196 (79%), Gaps = 2/196 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGK+Q+L+RFA++EF DSKATIGVEFQT+T+ I+ K +KAQIWDTAGQERYRA
Sbjct: 32 VIGDSAVGKTQILSRFAKNEFCFDSKATIGVEFQTRTVTINAKVIKAQIWDTAGQERYRA 91
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA+GAMLVYDITKRQSFD+VARW+EELR HAD +I+IML+GNK D R V
Sbjct: 92 VTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIMLIGNKGDFVDQRVVL 151
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEI-YRIVSKKALT-ANDESESGGSS 178
+EDA EFAE++GL F ETSAL NVE AFL +L EI R+VSK++L+ N ++ G +
Sbjct: 152 SEDAVEFAEEQGLFFSETSALTGGNVESAFLKLLQEINTRVVSKRSLSDCNHGKKTNGGN 211
Query: 179 SLLKATNIVVPGQEPE 194
SL + V+ G E E
Sbjct: 212 SLKGSKIDVISGPELE 227
>gi|442750113|gb|JAA67216.1| Putative ras-related protein rab-11a [Ixodes ricinus]
Length = 217
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/202 (59%), Positives = 157/202 (77%), Gaps = 2/202 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + +K VKAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAV A+LVYDI K +++NV RWL+EL+ HAD+NI+IMLVGNK+DL LRAVP
Sbjct: 76 ITSAYYRGAVXALLVYDIAKHLTYENVERWLKELKDHADQNIVIMLVGNKNDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK FAEK L F+ETSAL+STNVE AF +LT+IY IVS+K + + +++ S
Sbjct: 136 TDEAKAFAEKNKLSFIETSALDSTNVEAAFHQILTDIYHIVSQKQIRSEGDNDPSPSRDN 195
Query: 181 LKATNIVVPGQEPESGRRSYNC 202
+ T + P +S ++S C
Sbjct: 196 IPIT--IAPTDPTDSRKKSCAC 215
>gi|225446511|ref|XP_002278749.1| PREDICTED: ras-related protein Rab11B [Vitis vinifera]
gi|147844837|emb|CAN83336.1| hypothetical protein VITISV_029113 [Vitis vinifera]
Length = 216
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 126/205 (61%), Positives = 159/205 (77%), Gaps = 6/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDEKVVKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D +I+IMLVGNK+DL LRAV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHVTFENVDRWLKELRDHTDSSIVIMLVGNKADLGHLRAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAK +AEKE F+ETSALESTNVE AF VLT+IY +VS+KAL DE ++++
Sbjct: 138 TEDAKAYAEKESTFFIETSALESTNVENAFTEVLTQIYHVVSRKALETGDE-----AATV 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V G++ S + CC++
Sbjct: 193 PKGQTINV-GKDDVSAIKIGGCCSA 216
>gi|115456519|ref|NP_001051860.1| Os03g0843100 [Oryza sativa Japonica Group]
gi|41469625|gb|AAS07348.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|108712033|gb|ABF99828.1| Ras-related protein Rab11C, putative, expressed [Oryza sativa
Japonica Group]
gi|113550331|dbj|BAF13774.1| Os03g0843100 [Oryza sativa Japonica Group]
gi|215737493|dbj|BAG96623.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737626|dbj|BAG96756.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767052|dbj|BAG99280.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218194080|gb|EEC76507.1| hypothetical protein OsI_14277 [Oryza sativa Indica Group]
gi|222626146|gb|EEE60278.1| hypothetical protein OsJ_13326 [Oryza sativa Japonica Group]
Length = 223
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 118/164 (71%), Positives = 141/164 (85%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+ FSLDSK+TIGVEF T+T+ + K VKAQIWDTAGQERYRA
Sbjct: 23 LIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIWDTAGQERYRA 82
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+TK +F+NV RWL+ELR HAD NI++ML+GNK DL+ LR+V
Sbjct: 83 ITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNKIDLKHLRSVS 142
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKK 164
EDA FAE+EGL F+ETSAL++TNV+ AF TVLTEIYRI+SKK
Sbjct: 143 LEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIYRIISKK 186
>gi|224035169|gb|ACN36660.1| unknown [Zea mays]
gi|413954315|gb|AFW86964.1| ras protein RIC2 [Zea mays]
Length = 217
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 126/205 (61%), Positives = 156/205 (76%), Gaps = 6/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T++L + K VKAQIWDTAGQERYRA
Sbjct: 19 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQERYRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D NI++MLVGNKSDL L AV
Sbjct: 79 ITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDLRHLVAVQ 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++ K FAE+E L FMETSALESTNVE AF VL +IYRIV K+A+ A +++ SG
Sbjct: 139 TDEGKAFAERESLYFMETSALESTNVENAFAEVLAQIYRIVDKRAVEAGEDAASGPGRG- 197
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ NI ++ S + CC+S
Sbjct: 198 -EKINI----KDDVSAVKKGGCCSS 217
>gi|240254578|ref|NP_180943.4| RAB GTPaselike protein A1H [Arabidopsis thaliana]
gi|297826865|ref|XP_002881315.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|122244089|sp|Q1PEX3.1|RAA1H_ARATH RecName: Full=Ras-related protein RABA1h; Short=AtRABA1h
gi|91806311|gb|ABE65883.1| Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|297327154|gb|EFH57574.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|330253807|gb|AEC08901.1| RAB GTPaselike protein A1H [Arabidopsis thaliana]
Length = 218
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 155/205 (75%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
L GDS VGKS LL+RF R++FS DS++TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 18 LTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D N +IMLVGNK+DL LRA+
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIMLVGNKADLNHLRAIS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+ K+FAE+E FMETSALE+ NVE AF VLT+IYR+VSKKAL A D+ +++L
Sbjct: 138 TEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSKKALDAGDDP----TTAL 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V ++ S + CC +
Sbjct: 194 PKGQMINVGSRDDVSAVKKSGCCAT 218
>gi|268565079|ref|XP_002639326.1| C. briggsae CBR-RAB-11.1 protein [Caenorhabditis briggsae]
Length = 211
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 157/205 (76%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD+NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK +AE+ L F+ETSAL+STNVE AF +LTEIY+ VS K + ++ + GG ++
Sbjct: 136 TDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHVGSDRQGYGGGGGTI 195
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ A P EP + CC S
Sbjct: 196 IPA-----PPTEPPKKQ----CCNS 211
>gi|15242483|ref|NP_199387.1| Ras-related protein RABA1c [Arabidopsis thaliana]
gi|297794685|ref|XP_002865227.1| hypothetical protein ARALYDRAFT_494409 [Arabidopsis lyrata subsp.
lyrata]
gi|75171186|sp|Q9FK68.1|RAA1C_ARATH RecName: Full=Ras-related protein RABA1c; Short=AtRABA1c
gi|13877913|gb|AAK44034.1|AF370219_1 putative Rab-type small GTP-binding protein [Arabidopsis thaliana]
gi|9758678|dbj|BAB09217.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
gi|16323446|gb|AAL15217.1| putative Rab-type small GTP-binding protein [Arabidopsis thaliana]
gi|297311062|gb|EFH41486.1| hypothetical protein ARALYDRAFT_494409 [Arabidopsis lyrata subsp.
lyrata]
gi|332007909|gb|AED95292.1| Ras-related protein RABA1c [Arabidopsis thaliana]
Length = 216
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 121/172 (70%), Positives = 143/172 (83%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EFSL+SK+TIGVEF T++L + K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV WL+ELR H D NI++MLVGNKSDL L AV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDLRHLVAVQ 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDES 172
TEDAK FAEKE L FMETSALE+TNVE AF VLT+I+ IVSKKA+ A ES
Sbjct: 138 TEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAMEAASES 189
>gi|315229760|gb|ADT91500.1| small monomeric GTPase [Bactrocera dorsalis]
Length = 197
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 117/173 (67%), Positives = 145/173 (83%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 12 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRA 71
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL ELR HAD+NI+IMLVGNKSDL LR+VP
Sbjct: 72 ITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRSVP 131
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESE 173
T++A+ FAE+ GL F+ETSAL+STNVE AF +LTEIYRIVS+K + E +
Sbjct: 132 TDEARLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPEGD 184
>gi|393247234|gb|EJD54742.1| ras-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 213
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 126/205 (61%), Positives = 159/205 (77%), Gaps = 8/205 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 15 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K ++ NV RWL+ELR HAD NI+IMLVGNKSDL+ LRAVP
Sbjct: 75 ITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDLKHLRAVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL--TANDESESGGSS 178
T++AK F+ + GL F+ETSAL+++NVE AF T+LT+IYRIVS KAL A+ + G S
Sbjct: 135 TDEAKAFSTENGLSFIETSALDASNVEAAFQTILTDIYRIVSSKALEQAADSIKPTQGDS 194
Query: 179 SLLKATNIVVPGQEPESGRRSYNCC 203
++ T + P + E G+ CC
Sbjct: 195 IPVRPT-LDAPANK-EGGK----CC 213
>gi|403163937|ref|XP_003324018.2| GTP-binding protein ypt3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375164677|gb|EFP79599.2| GTP-binding protein ypt3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 214
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 120/203 (59%), Positives = 154/203 (75%), Gaps = 3/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF++DSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 15 LIGDSGVGKSNLLSRFTRNEFNMDSKSTIGVEFATRSISVDGKTIKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K ++ NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 75 ITSAYYRGAVGALLVYDISKHPTYVNVQRWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+A+ FA + L F+ETSA++++NVE AF +LT+IYRIVS KAL ++ ++ S S
Sbjct: 135 TEEAQAFATENNLSFIETSAMDASNVETAFQNILTDIYRIVSSKALESSADAVGPTSGST 194
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ T + G + CC
Sbjct: 195 ITVTPTSDDASKASGGGK---CC 214
>gi|326489989|dbj|BAJ94068.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 154/205 (75%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL RF R+EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYD+T+ +F+NV RWL+EL+ H D NI+IMLVGNK+DL LRAV
Sbjct: 77 ITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANIVIMLVGNKADLRHLRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
EDAK FAE+E FMETSALE+ NVE AF VLT+IYR+VSKKAL D+ ++
Sbjct: 137 VEDAKAFAEREYTFFMETSALEAMNVEDAFTEVLTQIYRVVSKKALDIGDD-----PAAP 191
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ I V ++ S + CC+S
Sbjct: 192 PRGQTINVGSKDDVSAVKKAGCCSS 216
>gi|303736|dbj|BAA02109.1| GTP-binding protein [Pisum sativum]
gi|738934|prf||2001457B GTP-binding protein
Length = 222
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 124/197 (62%), Positives = 153/197 (77%), Gaps = 3/197 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGK+Q+L+RF ++EF DSK+TIGVEFQTKT+ I+ K +KAQIWDTAGQERYRA
Sbjct: 14 VIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTKTVTINGKLIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA+GAMLVYDITKRQ+FD+VARW+EELR HAD +I+IML+GNK DL R V
Sbjct: 74 VTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRSHADGSIVIMLIGNKGDLVDQRGVQ 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA EFAE +GL F ETSA NV AFL +L EI ++VSK++L N+ + G+ +
Sbjct: 134 TEDAVEFAEDQGLFFSETSAFSGENVNSAFLKLLQEINKVVSKRSLECNNGIKGNGNHDV 193
Query: 181 --LKATNI-VVPGQEPE 194
LK I ++ G E E
Sbjct: 194 AALKGEKIDIISGSELE 210
>gi|221048037|gb|ACL98126.1| RAB11B protein [Epinephelus coioides]
Length = 218
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 126/208 (60%), Positives = 157/208 (75%), Gaps = 9/208 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FAE L F+ETSAL+STNVE AF +LTEIYRIVS+K + +A+DES
Sbjct: 136 TDEARAFAEGNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQISDRSAHDESPGNNV 195
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCCTS 205
+ + P E + G + CC S
Sbjct: 196 VDI-----SLPPTTEGQRGNK-LPCCQS 217
>gi|93279476|pdb|2F9L|A Chain A, 3d Structure Of Inactive Human Rab11b Gtpase
gi|93279477|pdb|2F9M|A Chain A, 3d Structure Of Active Human Rab11b Gtpase
Length = 199
Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 120/175 (68%), Positives = 146/175 (83%), Gaps = 3/175 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYR
Sbjct: 10 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRR 69
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 70 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 129
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDES 172
T++A+ FAEK L F+ETSAL+STNVE AF +LTEIYRIVS+K + A+DES
Sbjct: 130 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDES 184
>gi|91076508|ref|XP_973251.1| PREDICTED: similar to putative rab11 [Tribolium castaneum]
gi|270002909|gb|EEZ99356.1| Rab-protein 11 [Tribolium castaneum]
Length = 215
Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 124/207 (59%), Positives = 157/207 (75%), Gaps = 12/207 (5%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSMQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T+AYYRGAVGA+LVYDI K +++NV RWL ELR HAD+NI+IMLVGNKSDL LRAV
Sbjct: 76 ITAAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVL 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK FAE+ GL F+ETSAL+STNV+LAF +LTEIYRIVS+K + E + +
Sbjct: 136 TEEAKAFAERNGLSFIETSALDSTNVDLAFQNILTEIYRIVSQKQIRDPPEGD------V 189
Query: 181 LKATNI----VVPGQEPESGRRSYNCC 203
++ N+ V P + R+ CC
Sbjct: 190 IRPHNVEPIDVKPTMNTDGVRKQ--CC 214
>gi|224079047|ref|XP_002305729.1| predicted protein [Populus trichocarpa]
gi|222848693|gb|EEE86240.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 152/205 (74%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T++L + K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDSKVIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL ELR H D NI++ML+GNKSDL L AV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED K FAE+E L FMETSALE+TNV+ AF VL +IY IVSKKA+ D + + S
Sbjct: 138 TEDGKSFAERESLYFMETSALEATNVDNAFAEVLNQIYSIVSKKAMETGDNAAASAVPS- 196
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V + S + CC+S
Sbjct: 197 -KGEKIDV--NKDVSAMKRVGCCSS 218
>gi|390598604|gb|EIN08002.1| ras-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 213
Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 117/166 (70%), Positives = 143/166 (86%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 15 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K ++ NV RWL+ELR HAD NI+IMLVGNKSDL+ LRAVP
Sbjct: 75 ITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDLKHLRAVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL 166
TE+AK F+ + GL F+ETSAL+++NVE AF T+LT+IYRIVS K+L
Sbjct: 135 TEEAKTFSTENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSL 180
>gi|193645765|ref|XP_001950094.1| PREDICTED: ras-related protein Rab-11A-like isoform 1
[Acyrthosiphon pisum]
Length = 217
Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 126/210 (60%), Positives = 157/210 (74%), Gaps = 12/210 (5%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LLARF R+EF+L+SK+TIGVEF T+++ ++ K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLARFTRNEFNLESKSTIGVEFATRSIKVNKKIIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K+ ++ NV RWL ELR HAD+NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKQLTYQNVERWLSELRDHADQNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
++A FAE L F+ETSAL+STNVE AF +LTEIY IVS+K + E ++
Sbjct: 136 ADEATAFAEANNLSFIETSALDSTNVETAFENILTEIYNIVSQKQMRDPPEGDT------ 189
Query: 181 LKATNI----VVPGQEPESGRRSYNCCTSS 206
++ TNI V P ++ R+ CC SS
Sbjct: 190 IRPTNIEPIDVKPTVNSDNVRKQ--CCQSS 217
>gi|409082788|gb|EKM83146.1| hypothetical protein AGABI1DRAFT_82815 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200656|gb|EKV50580.1| hypothetical protein AGABI2DRAFT_134329 [Agaricus bisporus var.
bisporus H97]
Length = 211
Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 117/166 (70%), Positives = 143/166 (86%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 15 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K ++ NV RWL+ELR HAD NI+IMLVGNKSDL+ LRAVP
Sbjct: 75 ITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADTNIVIMLVGNKSDLKHLRAVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL 166
T++AK FA + GL F+ETSAL+++NVE AF T+LT+IYRIVS K+L
Sbjct: 135 TDEAKTFASENGLSFIETSALDASNVESAFQTILTDIYRIVSAKSL 180
>gi|302691568|ref|XP_003035463.1| GTPase [Schizophyllum commune H4-8]
gi|300109159|gb|EFJ00561.1| GTPase [Schizophyllum commune H4-8]
Length = 210
Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 126/204 (61%), Positives = 158/204 (77%), Gaps = 9/204 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 15 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVDGKTVKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K ++ NV RWL+ELR HAD NI+IMLVGNKSDL+ LRAVP
Sbjct: 75 ITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDLKHLRAVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL-TANDESESGGSSS 179
T++AK FA + L F+ETSAL+++NVE AF T+LT+IYRIVS K+L ++ + E SS
Sbjct: 135 TDEAKSFAAENNLSFIETSALDASNVESAFQTILTDIYRIVSSKSLESSANPIEPPNSSV 194
Query: 180 LLKATNIVVPGQEPESGRRSYNCC 203
+ AT V P P+ + CC
Sbjct: 195 TVSAT--VDP--TPQGNK----CC 210
>gi|342885037|gb|EGU85147.1| hypothetical protein FOXB_04325 [Fusarium oxysporum Fo5176]
Length = 197
Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 118/194 (60%), Positives = 151/194 (77%), Gaps = 4/194 (2%)
Query: 10 SQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGA 69
S LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA+TSAYYRGA
Sbjct: 8 SNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRAITSAYYRGA 67
Query: 70 VGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAE 129
VGA+LVYDI+K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVPTE+AK FA
Sbjct: 68 VGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVPTEEAKSFAS 127
Query: 130 KEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSLLKATNIVVP 189
+ L F+ETSAL+++NVELAF +LTEIYRIVS KAL + D ++ +++ TNI +
Sbjct: 128 ENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDSAQ----ATIGAGTNISLS 183
Query: 190 GQEPESGRRSYNCC 203
+ + CC
Sbjct: 184 KPADDDAAKGGKCC 197
>gi|50980824|gb|AAT91258.1| GTPase [Paxillus involutus]
Length = 211
Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 116/166 (69%), Positives = 143/166 (86%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 15 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSINVDSKTVKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K ++ NV RWL+ELR HAD NI+IMLVGNKSDL+ LRAVP
Sbjct: 75 ITSAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDLKHLRAVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL 166
TE+AK F+ + L F+ETSAL+++NVE AF T+LT++YRIVS K+L
Sbjct: 135 TEEAKNFSAENELSFIETSALDASNVESAFQTILTDVYRIVSTKSL 180
>gi|449521271|ref|XP_004167653.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 217
Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 127/211 (60%), Positives = 155/211 (73%), Gaps = 17/211 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EF+L+SK+TIGVEF T+TL + K +KAQIWDTAGQ RYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDTAGQGRYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+EL+ H D NI++MLVGNKSDL L AVP
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED K +AE+E L F+ETSALE+ NVE AF VLT+IY IVSKKA+ E GS+S
Sbjct: 138 TEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAV----EGGENGSAS- 192
Query: 181 LKATNIVVPGQ------EPESGRRSYNCCTS 205
VP Q + ESG CC+S
Sbjct: 193 ------AVPAQGEKINIKDESGLNRIKCCSS 217
>gi|392567720|gb|EIW60895.1| GTPase [Trametes versicolor FP-101664 SS1]
Length = 212
Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 116/171 (67%), Positives = 147/171 (85%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L++K+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 15 LIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRSINVDGKTLKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T+AYYRGAVGA+LVYDI+K ++ NV RWL+ELR HAD NI+IMLVGNKSDL+ LRAVP
Sbjct: 75 ITAAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDLKHLRAVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDE 171
TE+AK FA + GL F+ETSAL+++NVE AF T+LT+IYRIVS K+L +D+
Sbjct: 135 TEEAKAFAAENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSLEQSDD 185
>gi|326435207|gb|EGD80777.1| tubulovesicle-associated protein [Salpingoeca sp. ATCC 50818]
Length = 214
Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 116/181 (64%), Positives = 151/181 (83%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 15 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K S++NV+RWL+ELR HAD NI+IMLVGNKSDL+ LRAVP
Sbjct: 75 ITSAYYRGAVGALLVYDIAKHASYENVSRWLKELRDHADSNIVIMLVGNKSDLKHLRAVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+A +FAE+ L F+ETSAL+STNVE AF +LT IYR+VS++++ A + ++ S ++
Sbjct: 135 KEEATKFAEENSLSFIETSALDSTNVEEAFKNILTSIYRLVSQRSIKAGESDKTTPSDTI 194
Query: 181 L 181
+
Sbjct: 195 V 195
>gi|47203604|emb|CAF87898.1| unnamed protein product [Tetraodon nigroviridis]
Length = 203
Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 120/175 (68%), Positives = 147/175 (84%), Gaps = 3/175 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 3 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 62
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 63 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVP 122
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDES 172
T++A+ FAEK L F+ETSAL+ST VE AF +LTEIYRIVS+K + +A+DES
Sbjct: 123 TDEARAFAEKNTLSFIETSALDSTKVEEAFKNILTEIYRIVSQKQIADRSAHDES 177
>gi|224121856|ref|XP_002330670.1| predicted protein [Populus trichocarpa]
gi|222872274|gb|EEF09405.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 156/205 (76%), Gaps = 6/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H + NI+IMLVGNK+DL LRAV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTESNIVIMLVGNKADLRHLRAVT 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA FAE+E FMETSALES NVE AF VLT+IY +VS+KAL D+ ++L
Sbjct: 138 TEDATAFAEREKTFFMETSALESLNVENAFTEVLTQIYHVVSRKALDVGDD-----PAAL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V G++ S + CC++
Sbjct: 193 PKGQTINV-GKDDVSAVKKVGCCSA 216
>gi|242091099|ref|XP_002441382.1| hypothetical protein SORBIDRAFT_09g025640 [Sorghum bicolor]
gi|241946667|gb|EES19812.1| hypothetical protein SORBIDRAFT_09g025640 [Sorghum bicolor]
Length = 220
Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 123/205 (60%), Positives = 158/205 (77%), Gaps = 6/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EFSL+SK+TIGVEF T++L + K +KAQIWDTAGQERYRA
Sbjct: 22 LIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQIWDTAGQERYRA 81
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+R +FDNV RWL ELR H D++I++ML+GNKSDL L AV
Sbjct: 82 ITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDQSIVVMLIGNKSDLRHLVAVS 141
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T+DAKE+AE E + FMETSAL++TNV+ AF VLT+IY+IVSKK + A +E +G
Sbjct: 142 TDDAKEYAEAESMYFMETSALDATNVDNAFSEVLTQIYQIVSKKTVEALEEGAAGPG--- 198
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V ++ S + CC++
Sbjct: 199 -KGEKINV--KDDVSAMKRVGCCSN 220
>gi|388497830|gb|AFK36981.1| unknown [Lotus japonicus]
Length = 217
Score = 248 bits (634), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 155/205 (75%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D NI+IMLVGNK+DL LRAV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRHLRAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T+DAK FAE+E FMETSALES NV+ AF VLT+IYR+VSKK L D+ ++L
Sbjct: 138 TDDAKGFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSKKTLEIGDD-----PAAL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V ++ S + C ++
Sbjct: 193 PKGQTINVGSKDDVSAVKKVGCYSA 217
>gi|303744|dbj|BAA02113.1| GTP-binding protein [Pisum sativum]
gi|452361|emb|CAA82709.1| guanine nucleotide regulatory protein [Vicia faba]
gi|738937|prf||2001457E GTP-binding protein
gi|1098295|prf||2115367C small GTP-binding protein
Length = 217
Score = 248 bits (634), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 155/205 (75%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EF+L+SK+TIGVEF T+TL + K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D NI++MLVGNK+DL L AV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNIVVMLVGNKADLRHLVAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED K +AEKE L FMETSALE+TNVE AF VLT+IY IVSKK + +E+G +S
Sbjct: 138 TEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSKKTVEG---AENGNASVP 194
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I + + S + CC+S
Sbjct: 195 AKGEKIDL--KNDVSALKRVGCCSS 217
>gi|334261585|gb|AEG74033.1| Rab protein [Pellia endiviifolia (species B)]
Length = 217
Score = 248 bits (634), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 155/205 (75%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDSKLIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDIT+ +F+NV RWL+EL+ H D NI++MLVGNKS L LRAV
Sbjct: 77 ITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVVMLVGNKSVLRHLRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
+D + F+EKEGL FMETSALESTNVE AF + T+IYR+VSKKAL ++ S+
Sbjct: 137 ADDGQSFSEKEGLFFMETSALESTNVENAFKQIPTQIYRVVSKKALDVGEDP----SAVP 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V ++ + + CC++
Sbjct: 193 GKGQTISVGNKDDVTATKKVGCCSA 217
>gi|388498522|gb|AFK37327.1| unknown [Lotus japonicus]
Length = 212
Score = 248 bits (634), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 122/208 (58%), Positives = 156/208 (75%), Gaps = 14/208 (6%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ IH K VKAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRIHDKTVKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYD+T++ +F+NV RWL+ELR H D NI+IMLVGNK+DL LRAVP
Sbjct: 76 ITSAYYRGAVGALIVYDVTRQVTFENVQRWLKELRDHTDANIVIMLVGNKADLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDES---ESGGS 177
TE+A FAE+E FMETSALES NV+ AF+ VL+EIY +VS+K L ++ G +
Sbjct: 136 TEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRKTLEKGNDPGALPQGQT 195
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCCTS 205
+L + + PG CC++
Sbjct: 196 INLGDVSAVKKPG-----------CCSA 212
>gi|73535736|pdb|1YZK|A Chain A, Gppnhp Bound Rab11 Gtpase
Length = 184
Score = 248 bits (634), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 116/160 (72%), Positives = 139/160 (86%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 25 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 84
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 85 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 144
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRI 160
T++A+ FAEK GL F+ETSAL+STNVE AF T+LTEIYRI
Sbjct: 145 TDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 184
>gi|359493623|ref|XP_002282900.2| PREDICTED: uncharacterized protein LOC100265827 [Vitis vinifera]
Length = 715
Score = 248 bits (634), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 155/205 (75%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 516 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQERYRA 575
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D +I+IMLVGNK DL LRAV
Sbjct: 576 ITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSHIVIMLVGNKGDLRHLRAVS 635
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
+DAK FAE+E FMETSALES NVE AF VLT+IY++VS+KAL D+ ++L
Sbjct: 636 IDDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYQVVSRKALDIGDD-----PAAL 690
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V ++ S + CC+S
Sbjct: 691 PKGQTINVGTKDDVSAVKKAGCCSS 715
>gi|147788245|emb|CAN75965.1| hypothetical protein VITISV_014527 [Vitis vinifera]
Length = 217
Score = 248 bits (634), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 154/205 (75%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D +I+IMLVGNK DL L AV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSHIVIMLVGNKGDLRHLXAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
+DAK FAE+E FMETSALES NVE AF VLT+IY++VS+KAL D+ ++L
Sbjct: 138 IDDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYQVVSRKALDIGDD-----PAAL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V ++ S + CC+S
Sbjct: 193 PKGQTINVGTKDDVSAVKKAGCCSS 217
>gi|25012906|gb|AAN71540.1| RH21315p [Drosophila melanogaster]
Length = 214
Score = 248 bits (634), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 116/166 (69%), Positives = 142/166 (85%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+S +TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESNSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL ELR HAD+NI+IMLVGNKSDL LR+VP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRSVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL 166
T++AK FAE+ GL F+ETSAL+STNVE AF +LTEIYRIVS+K +
Sbjct: 136 TDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 181
>gi|255644772|gb|ACU22888.1| unknown [Glycine max]
Length = 236
Score = 248 bits (633), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 123/206 (59%), Positives = 161/206 (78%), Gaps = 4/206 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGK+Q+L+RFA++EF +SK+TIGVEFQT+++ I+ K +KAQIWDTAGQERYRA
Sbjct: 29 VIGDSAVGKTQILSRFAKNEFCFNSKSTIGVEFQTRSVTINGKVIKAQIWDTAGQERYRA 88
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA+GAMLVYDITKRQSFD+VARW++ELR HAD +I+IML+GNK DL R V
Sbjct: 89 VTSAYYRGALGAMLVYDITKRQSFDHVARWVDELRAHADSSIVIMLIGNKGDLVDQRVVH 148
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTA-NDESESGGSSS 179
EDA EFAE +GL F ETSAL NVE +F +L EI+R++SK++L N ++ + + +
Sbjct: 149 AEDAVEFAEDQGLFFSETSALSGENVESSFFKLLEEIHRVISKRSLECDNGKANADNNVA 208
Query: 180 LLKATNI-VVPGQEPESG--RRSYNC 202
LK + I V+ G E E ++S +C
Sbjct: 209 TLKGSKIDVISGAELEIAEMKKSSSC 234
>gi|341038786|gb|EGS23778.1| putative GTP-binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 224
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 118/166 (71%), Positives = 140/166 (84%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ I K +KAQIWDTAGQERYRA
Sbjct: 26 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQIDGKTIKAQIWDTAGQERYRA 85
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K SF+NV+RWL+ELR HAD NI+IMLVGNK+D LRAV
Sbjct: 86 ITSAYYRGAVGALLVYDIGKSSSFENVSRWLKELRDHADSNIVIMLVGNKTDKRHLRAVS 145
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL 166
TED K FA + GL F+ETSALE+TNV+LAF +LT IY+IVS K+L
Sbjct: 146 TEDGKAFAAEHGLSFIETSALEATNVDLAFQEILTSIYQIVSSKSL 191
>gi|167537606|ref|XP_001750471.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771011|gb|EDQ84685.1| predicted protein [Monosiga brevicollis MX1]
Length = 208
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 121/205 (59%), Positives = 156/205 (76%), Gaps = 11/205 (5%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + +K +KAQIWDTAGQERYRA
Sbjct: 15 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKVENKTIKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL+ LRAVP
Sbjct: 75 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLKHLRAVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+A++FAE+ L F+ETSALE+ NV+ AF T+LT+IY IVS+K + A +
Sbjct: 135 TEEAQKFAEENDLSFIETSALEAENVDDAFTTILTKIYHIVSQKQVAAPE---------- 184
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K ++ P + S +S C S
Sbjct: 185 -KPDTVIDPTKPQNSKEKSGGCGCS 208
>gi|224061286|ref|XP_002300408.1| predicted protein [Populus trichocarpa]
gi|118482455|gb|ABK93150.1| unknown [Populus trichocarpa]
gi|222847666|gb|EEE85213.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 125/204 (61%), Positives = 154/204 (75%), Gaps = 7/204 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D NI+IM VGNK+DL LRAV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGNKADLRHLRAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAK FAE+E FMETSALES NVE AF VLT+IY +VS+KAL D+ ++L
Sbjct: 138 TEDAKAFAERENTYFMETSALESLNVENAFTEVLTQIYHVVSRKALDIGDD-----PAAL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCT 204
K I V ++ S + CC+
Sbjct: 193 PKGETINV--KDDVSAVKKVGCCS 214
>gi|302691566|ref|XP_003035462.1| hypothetical protein SCHCODRAFT_66290 [Schizophyllum commune H4-8]
gi|300109158|gb|EFJ00560.1| hypothetical protein SCHCODRAFT_66290 [Schizophyllum commune H4-8]
Length = 212
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 123/204 (60%), Positives = 157/204 (76%), Gaps = 7/204 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFS D+K+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 15 LIGDSGVGKSNLLSRFTRNEFSQDTKSTIGVEFATRSITVEGKILKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T+AYYRGAVGA+LVYDI+KR S++NV RWL+ELR HAD NI+IMLVGNKSDL+ LRAVP
Sbjct: 75 ITAAYYRGAVGALLVYDISKRGSYENVQRWLKELRDHADSNIVIMLVGNKSDLKHLRAVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FA + GL F+ETSAL+++NV+ AF T LT+IYRIVS + L ES +
Sbjct: 135 TDEARAFAAENGLSFIETSALDASNVDSAFETNLTDIYRIVSSRTL------ESSANPIE 188
Query: 181 LKATNIVVPGQEPES-GRRSYNCC 203
+ N V G +S ++S CC
Sbjct: 189 APSGNTVSVGPSLDSNAKQSNGCC 212
>gi|402225755|gb|EJU05816.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 213
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 119/171 (69%), Positives = 146/171 (85%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+ DSK+TIGVEF T++L + K VKAQIWDTAGQERYRA
Sbjct: 15 LIGDSGVGKSNLLSRFTRNEFNPDSKSTIGVEFATRSLEVDGKVVKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K+ +F NVARWL+ELR HAD +I++MLVGNKSDL+ LRAV
Sbjct: 75 ITSAYYRGAVGALLVYDISKQPTFANVARWLKELRDHADSSIVVMLVGNKSDLKHLRAVL 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDE 171
T++AK+FA GL F+ETSAL+++NVE AF +LT+IYRIVS K+L A DE
Sbjct: 135 TDEAKQFAMDNGLSFIETSALDASNVEAAFQQILTDIYRIVSSKSLDAADE 185
>gi|324508455|gb|ADY43568.1| Ras-related protein Rab-11A [Ascaris suum]
Length = 240
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 123/206 (59%), Positives = 158/206 (76%), Gaps = 8/206 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 41 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQIWDTAGQERYRA 100
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++ V RWL+ELR HAD+NI+IMLVGNKSDL LRAVP
Sbjct: 101 ITSAYYRGAVGALLVYDIAKHVTYEAVERWLKELRDHADQNIVIMLVGNKSDLRHLRAVP 160
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK +AEK L F+ETSAL+STNVE AF +LTEIY+ VS K +D + S
Sbjct: 161 TDEAKAYAEKNQLSFIETSALDSTNVEAAFTNILTEIYKSVSVKHFGGDDRVQ----VSP 216
Query: 181 LKATNIVV-PGQEPESGRRSYNCCTS 205
+ IV+ P +P++ ++ CC++
Sbjct: 217 VGTNGIVISPTTDPQTKKQ---CCSN 239
>gi|395330307|gb|EJF62691.1| ras-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 212
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/203 (59%), Positives = 159/203 (78%), Gaps = 5/203 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF++++K+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 15 LIGDSGVGKSNLLSRFTRNEFNIETKSTIGVEFATRSINVEGKTLKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T+AYYRGAVGA+LVYDI+K ++ NV RWL+ELR HAD NI+IMLVGNKSDL+ LRAVP
Sbjct: 75 ITAAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDLKHLRAVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK FA + GL F+ETSAL+++NVE AF T+LT+IYRIVS K+L +++ S
Sbjct: 135 TEEAKAFAAENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSLEQSEDPIKPTSGDT 194
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
++ ++ V Q + G+ CC
Sbjct: 195 IQVSHSVDQNQ-SQGGK----CC 212
>gi|116780906|gb|ABK21873.1| unknown [Picea sitchensis]
Length = 210
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 125/203 (61%), Positives = 159/203 (78%), Gaps = 7/203 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGKS LL+R+AR+EF+ +SKATIGVEFQT+ + I K VKAQIWDTAGQER+RA
Sbjct: 15 VIGDSAVGKSNLLSRYARNEFNPNSKATIGVEFQTQVMEIDGKEVKAQIWDTAGQERFRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA++VYDI++R +FDNVARWLEEL+ HAD N++ MLVGNKSDLE +R VP
Sbjct: 75 VTSAYYRGAVGALIVYDISRRLTFDNVARWLEELKMHADSNVVKMLVGNKSDLEHIREVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
ED ++ AE EGL F+ETSAL++TNV AF V+ EIY VSKK L + D +S S +
Sbjct: 135 VEDGRKLAESEGLFFIETSALDNTNVMPAFQIVVREIYNNVSKKMLNS-DSYKSELSLNR 193
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+K ++ G++P + Y+CC
Sbjct: 194 VK----IMDGEDPP--KTKYSCC 210
>gi|444721666|gb|ELW62390.1| Ras-related protein Rab-11A [Tupaia chinensis]
Length = 236
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 127/232 (54%), Positives = 159/232 (68%), Gaps = 36/232 (15%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 9 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 68
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 69 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 128
Query: 121 TEDAKEFA---------------------------EKEGLCFMETSALESTNVELAFLTV 153
T++A+ FA EK GL F+ETSAL+STNVE AF T+
Sbjct: 129 TDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEKNGLSFIETSALDSTNVEAAFQTI 188
Query: 154 LTEIYRIVSKKALTANDESESGGSSSLLKATNIVVPGQEPES--GRRSYNCC 203
LTEIYRIVS+K ++ E++ + +N VVP P + + CC
Sbjct: 189 LTEIYRIVSQKQMSDRREND-------MSPSNNVVPIHVPPTTENKPKVQCC 233
>gi|195997965|ref|XP_002108851.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190589627|gb|EDV29649.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 212
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 121/203 (59%), Positives = 152/203 (74%), Gaps = 6/203 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++N+ RWL+ELR HAD NI+IMLVGNK DL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENIERWLKELRDHADANIVIMLVGNKCDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK FAEK L F+ETSAL+STNVE AF +LTEIY IVS+K + + +S
Sbjct: 136 TDEAKNFAEKNTLSFIETSALDSTNVETAFQNILTEIYHIVSQKQI------KDAPQNSE 189
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ + IVV ++ CC
Sbjct: 190 ISSQPIVVGPTVDSDVKKKPQCC 212
>gi|388497366|gb|AFK36749.1| unknown [Lotus japonicus]
Length = 218
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 126/207 (60%), Positives = 164/207 (79%), Gaps = 6/207 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS L +RF R+EF L+SK+TIGVEF T+TL + + VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLFSRFTRNEFCLESKSTIGVEFATRTLEVEGRMVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGA+GA+LVYD+TK SF+NV RWL+ELR HAD NI+IML+GNK+DL+ LR V
Sbjct: 77 ITSAYYRGALGALLVYDVTKPTSFENVTRWLKELRDHADANIVIMLIGNKTDLKHLRGVA 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA+ +AEKEGL F+ETSALE+TNV+ AF T+L +IYRI+SKK+L+++ S + ++
Sbjct: 137 TEDAQSYAEKEGLSFIETSALEATNVDKAFQTILAQIYRIISKKSLSSSSTDPS--APNI 194
Query: 181 LKATNIVVPGQ-EPESGRRSYNCCTSS 206
+ I + G +P + S +CCT+S
Sbjct: 195 KQGNTITIEGGLQPNT---SKSCCTTS 218
>gi|356573249|ref|XP_003554775.1| PREDICTED: ras-related protein RABA3-like [Glycine max]
Length = 236
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 121/196 (61%), Positives = 156/196 (79%), Gaps = 2/196 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGK+Q+L+RFA++EF +SK+TIGVEFQT+++ I+ K +KAQIWDTAGQERYRA
Sbjct: 29 VIGDSAVGKTQILSRFAKNEFCFNSKSTIGVEFQTRSVTINGKVIKAQIWDTAGQERYRA 88
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA+GAMLVYDITKRQSFD+VARW++ELR HAD +I+IML+GNK DL R V
Sbjct: 89 VTSAYYRGALGAMLVYDITKRQSFDHVARWVDELRAHADSSIVIMLIGNKGDLVDQRVVH 148
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTA-NDESESGGSSS 179
EDA EFAE +GL F ETSAL NVE +F +L EI+R++SK++L N ++ + + +
Sbjct: 149 AEDAVEFAEDQGLFFSETSALSGENVESSFFKLLEEIHRVISKRSLECDNGKANADNNVA 208
Query: 180 LLKATNI-VVPGQEPE 194
LK + I V+ G E E
Sbjct: 209 TLKGSKIDVISGAELE 224
>gi|190347699|gb|EDK40024.2| hypothetical protein PGUG_04122 [Meyerozyma guilliermondii ATCC
6260]
Length = 218
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 119/203 (58%), Positives = 152/203 (74%), Gaps = 4/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF RDEF+L+S++TIGVEF T+TL I + VKAQIWDTAGQERYRA
Sbjct: 20 LIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGRRVKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI+K +S+++V+RWL+EL+ HAD NI+I LVGNKSDL+ LRAVP
Sbjct: 80 ITSAYYRGAVGALIVYDISKTESYESVSRWLKELKEHADTNIVIELVGNKSDLDHLRAVP 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK FA + L F E SAL S NV+L+F +L IY ++SK L ND+ S
Sbjct: 140 TEEAKSFANENSLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNDQGAQKPSGPT 199
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ T P + + G+ + NCC
Sbjct: 200 ISLT----PAPQEKKGKNNSNCC 218
>gi|226287961|gb|EEH43474.1| GTP-binding protein ypt3 [Paracoccidioides brasiliensis Pb18]
Length = 210
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 124/203 (61%), Positives = 151/203 (74%), Gaps = 6/203 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD TK+Q+F N RWL+ELR HADKNI+IMLVGNK D + +R V
Sbjct: 74 ITSAYYRGAVGALLVYDTTKKQTFANCERWLKELREHADKNIVIMLVGNKIDEKHMRDVK 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T DA EFA++ L F+ETSAL++TNVELAF +LTEIYRIVS KAL E+G SS
Sbjct: 134 TSDAVEFADEMKLSFIETSALDATNVELAFQNILTEIYRIVSSKAL------ENGSSSQN 187
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
V+ + + CC
Sbjct: 188 PLGDRKVIEISKTQDADAKQKCC 210
>gi|449468390|ref|XP_004151904.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|449529820|ref|XP_004171896.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
Length = 217
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 154/205 (75%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL++K+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDKIVKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYD+T+ +F+NV RWL+ELR H D NI+IMLVGNK+DL LRAV
Sbjct: 78 ITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRSHTDHNIVIMLVGNKADLRHLRAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA+ FAE+E FMETSALES NVE +F VLT+ YR+VS+K L D+ + L
Sbjct: 138 TEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSRKILDIGDD-----PTVL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I + ++ S + CC+S
Sbjct: 193 PKGQTIDIGSKDDVSAVKKAGCCSS 217
>gi|242086541|ref|XP_002439103.1| hypothetical protein SORBIDRAFT_09g000540 [Sorghum bicolor]
gi|241944388|gb|EES17533.1| hypothetical protein SORBIDRAFT_09g000540 [Sorghum bicolor]
Length = 220
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/206 (59%), Positives = 160/206 (77%), Gaps = 4/206 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF L+SK+TIGVEF T+TL + K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGA+GA+LVYD++K +F+N++RWL+ELR HAD NI IMLVGNK+DL LRAV
Sbjct: 78 ITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHADSNIRIMLVGNKTDLRHLRAVA 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T+DA+ FAE EGL ++ETSALE+TNVE AF +L +IYR +SKK + A+DES G + +
Sbjct: 138 TDDAQSFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAISKKPV-ASDESGQGAAGGV 196
Query: 181 LKATNI-VVPGQEPESGRRSYNCCTS 205
+ I V G + + ++ CC++
Sbjct: 197 KEGKTINVATGGDAAAEKK--QCCSA 220
>gi|226492842|ref|NP_001148331.1| LOC100281941 [Zea mays]
gi|195617868|gb|ACG30764.1| ras-related protein RIC2 [Zea mays]
Length = 220
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/205 (60%), Positives = 158/205 (77%), Gaps = 6/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EFSL+SK+TIGVEF T++L + K +KAQIWDTAGQERYRA
Sbjct: 22 LIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQIWDTAGQERYRA 81
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+R +FDNV RWL ELR H D++I++MLVGNKSDL L AV
Sbjct: 82 ITSAYYRGAVGALLVYDVTRRTTFDNVGRWLRELRDHTDQSIVVMLVGNKSDLRHLVAVS 141
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T+DAKEFAE E + FMETSAL++TNV+ +F VLT+IY+IVSKK + +E G+ +
Sbjct: 142 TDDAKEFAEAESMYFMETSALDATNVDSSFSEVLTQIYQIVSKKTVEVPEE----GAVAP 197
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V ++ S + CC++
Sbjct: 198 GKGEKINV--KDDVSAMKRVGCCSN 220
>gi|226510193|ref|NP_001148694.1| LOC100282310 [Zea mays]
gi|194698036|gb|ACF83102.1| unknown [Zea mays]
gi|195621456|gb|ACG32558.1| ras-related protein RGP2 [Zea mays]
gi|413944911|gb|AFW77560.1| Ras protein RGP2 [Zea mays]
Length = 217
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 116/164 (70%), Positives = 139/164 (84%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+ FSLDSK+TIGVEF TK+L + K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMDGKTIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITKRQSFDNV RWL ELR HAD +I+IM+VGNKSDL LRA+
Sbjct: 77 ITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMVGNKSDLIHLRAIS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKK 164
++ K AEKEGL F+ETSA+E+ NVE AF T++TE+Y IV++K
Sbjct: 137 EDEGKALAEKEGLFFLETSAMEAINVEQAFQTIMTEVYGIVNRK 180
>gi|344233518|gb|EGV65390.1| ras-domain-containing protein [Candida tenuis ATCC 10573]
Length = 219
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 120/203 (59%), Positives = 154/203 (75%), Gaps = 3/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF RDEF+LDS++TIGVEF T+TL I K VKAQIWDTAGQERYRA
Sbjct: 20 LIGDSGVGKSNLLSRFTRDEFNLDSRSTIGVEFATRTLEIDGKRVKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI+K +S+++V+RWL+EL+ HAD NI+I LVGNKSDL+ LRAVP
Sbjct: 80 ITSAYYRGAVGALIVYDISKTESYESVSRWLKELKEHADANIVIELVGNKSDLDHLRAVP 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK FA + L F E SAL S NV+L+F +L IY ++SK L +D+ + SS
Sbjct: 140 TDEAKNFANENSLLFTEASALNSDNVDLSFHQLLKNIYEMISKHQLETDDQPSAKPSSG- 198
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
AT + P + + + + NCC
Sbjct: 199 --ATISLTPVPQEKKSKNNANCC 219
>gi|242048154|ref|XP_002461823.1| hypothetical protein SORBIDRAFT_02g008790 [Sorghum bicolor]
gi|241925200|gb|EER98344.1| hypothetical protein SORBIDRAFT_02g008790 [Sorghum bicolor]
Length = 223
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 116/166 (69%), Positives = 139/166 (83%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++ F+LDSK+TIGVEF T+T+ + K +KAQIWDTAGQERYRA
Sbjct: 23 LIGDSGVGKSNLLSRFTKNTFALDSKSTIGVEFATRTIQVDTKTIKAQIWDTAGQERYRA 82
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+TK +F+NV RWL+ELR HAD NI++ML+GNK DL LR+V
Sbjct: 83 ITSAYYRGAVGALLVYDVTKVMTFENVKRWLKELRDHADSNIVVMLIGNKIDLRHLRSVA 142
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL 166
EDA FAE EGL F+ETSAL++TNVE AF TVL EIYRI+SKK L
Sbjct: 143 VEDAASFAESEGLFFIETSALDATNVEKAFQTVLAEIYRIISKKPL 188
>gi|389748791|gb|EIM89968.1| ras-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 212
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/203 (59%), Positives = 156/203 (76%), Gaps = 5/203 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L++K+TIGVEF T+T+ + K +KAQIWDTAGQERYRA
Sbjct: 15 LIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRTISVDGKTLKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T+AYYRGAVGA+LVYDI K ++ NV RWL+ELR HAD NI+IMLVGNKSDL+ LRAVP
Sbjct: 75 ITAAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDLKHLRAVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK F+ + GL F+ETSAL+++NVE AF T+LT+I+RIVS K+L + ++ S
Sbjct: 135 TEEAKAFSAENGLSFIETSALDASNVESAFQTILTDIFRIVSNKSLEPSGDAIKPSSGDT 194
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
L V P + + + S CC
Sbjct: 195 LT----VSPSVDTSNAQAS-KCC 212
>gi|115462975|ref|NP_001055087.1| Os05g0280200 [Oryza sativa Japonica Group]
gi|109940138|sp|Q40723.2|RGP2_ORYSJ RecName: Full=Ras-related protein RGP2; AltName: Full=GTP-binding
regulatory protein RGP2
gi|46485881|gb|AAS98506.1| putative GTP-binding protein Rab11 [Oryza sativa Japonica Group]
gi|113578638|dbj|BAF17001.1| Os05g0280200 [Oryza sativa Japonica Group]
gi|125551654|gb|EAY97363.1| hypothetical protein OsI_19285 [Oryza sativa Indica Group]
gi|149390917|gb|ABR25476.1| gtp-binding regulatory protein rgp2 [Oryza sativa Indica Group]
gi|222630958|gb|EEE63090.1| hypothetical protein OsJ_17898 [Oryza sativa Japonica Group]
Length = 217
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 117/164 (71%), Positives = 139/164 (84%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+ FSLDSK+TIGVEF TK+L + K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITKRQSFDNV RWL ELR HAD +I+IM+VGNKSDL LRAV
Sbjct: 77 ITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMVGNKSDLIHLRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKK 164
++ K AEKEGL F+ETSA+E+ NVE AF T++TE+Y IV++K
Sbjct: 137 EDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNRK 180
>gi|67078856|gb|AAY64452.1| small GTPase Rab11-2 [Gracilaria lemaneiformis]
Length = 214
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 155/205 (75%), Gaps = 8/205 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGD+ VGKS LL+RF R+EFSL+SK+TIG EF T+++ K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDAGVGKSNLLSRFTRNEFSLESKSTIGAEFATRSIQCEGKIIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITK+ SFDNV RWL+EL+ HAD NI+IMLVGNKSDL+ L+AV
Sbjct: 76 ITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLVGNKSDLQHLKAVT 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T+DA FAE GL F+ETSAL+++ VE AF ++L+EIYR+ SKKAL E G +S+
Sbjct: 136 TDDASAFAESNGLSFIETSALDNSTVEEAFRSILSEIYRLGSKKAL------EKGSTSNF 189
Query: 181 L-KATNIVVPGQEPESGR-RSYNCC 203
AT +V + G+ CC
Sbjct: 190 APNATQTIVINPPADEGKTEKAKCC 214
>gi|391341972|ref|XP_003745298.1| PREDICTED: ras-related protein Rab-11A-like [Metaseiulus
occidentalis]
Length = 218
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/208 (59%), Positives = 157/208 (75%), Gaps = 10/208 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K ++++V RWL+ELR HAD +I+IMLVGNK+DL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHITYEHVERWLKELRDHADHHIVIMLVGNKNDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK FAEK L F+ETSAL+STNVE AF +LT+IY IVS+K + AND ++L
Sbjct: 136 TDEAKAFAEKNNLNFIETSALDSTNVESAFQQILTDIYHIVSRKQM-AND--GDADIAAL 192
Query: 181 LKATNIVVPGQE----PESGRRSYNCCT 204
I +P E P + ++ CC
Sbjct: 193 KNENKITIPPNESRKDPPASKK---CCN 217
>gi|89257513|gb|ABD65003.1| Ras-related GTP-binding protein, putative [Brassica oleracea]
Length = 221
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/204 (59%), Positives = 154/204 (75%), Gaps = 2/204 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LLARFARDEF +SK+TIGVEFQT+ +VI+ K +KAQIWDTAGQER+RA
Sbjct: 19 LIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIVINGKEIKAQIWDTAGQERFRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA+LVYDI++ Q+F ++ RWL EL H+D N++ +LVGNKSDL+ +R VP
Sbjct: 79 VTSAYYRGAVGALLVYDISRVQTFQSIGRWLNELHTHSDMNVVTILVGNKSDLKDIREVP 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T + K AE +GL FMETSAL+S+NV AF TV+ EIY I+S+K +T+ E +SL
Sbjct: 139 TSEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMTSQ-ELNKQDPASL 197
Query: 181 LKATNIVVPGQEPESGRRSYNCCT 204
+V+P E ES CC+
Sbjct: 198 SNGKKVVIP-SEGESKTGGGGCCS 220
>gi|356548393|ref|XP_003542586.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 155/205 (75%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EFSL+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDEKVLKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+N+ RWL+ELR H D NI++MLVGNK+DL LRAV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHVTFENMERWLKELRDHTDANIVVMLVGNKADLRHLRAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+A FAE+E FMETSALES NVE AF VLT+IY +VSKKAL D+ ++L
Sbjct: 138 TEEATAFAEREKTFFMETSALESMNVENAFTEVLTQIYHVVSKKALEIGDD-----PAAL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V ++ S + CC++
Sbjct: 193 PKGQTINVGSRDDVSAVKKDGCCSA 217
>gi|5926718|dbj|BAA84640.1| PRA2 [Pisum sativum]
Length = 233
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/197 (62%), Positives = 152/197 (77%), Gaps = 3/197 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGK+Q+L+RF ++EF DSK+TIGVEFQTKT+ I+ K +KAQIWDTAGQERYRA
Sbjct: 25 VIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTKTVTINGKLIKAQIWDTAGQERYRA 84
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA+GAMLVYDITKRQ+FD+VARW+EELR HAD +I+IML+GNK DL R V
Sbjct: 85 VTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRSHADGSIVIMLIGNKGDLVDQRGVQ 144
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA EFAE +GL F ETSA NV AFL +L EI ++VSK++L N+ + G+ +
Sbjct: 145 TEDAVEFAEDQGLFFSETSAFSGENVNSAFLKLLQEINKVVSKRSLECNNGIKGNGNHDV 204
Query: 181 --LKATNI-VVPGQEPE 194
LK I ++ E E
Sbjct: 205 AALKGEKIDIISASELE 221
>gi|260949821|ref|XP_002619207.1| hypothetical protein CLUG_00366 [Clavispora lusitaniae ATCC 42720]
gi|238846779|gb|EEQ36243.1| hypothetical protein CLUG_00366 [Clavispora lusitaniae ATCC 42720]
Length = 220
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 125/203 (61%), Positives = 152/203 (74%), Gaps = 2/203 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF RDEF+L+S++TIGVEF T+TL I K VKAQIWDTAGQERYRA
Sbjct: 20 LIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI+K +S+++V+RWL+ELR HAD NI+I LVGNKSDL+ LRAVP
Sbjct: 80 ITSAYYRGAVGALIVYDISKTESYESVSRWLKELREHADANIVIELVGNKSDLDHLRAVP 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK FA + L F E SAL S NV+L+F +L IY ++SK L ND S S
Sbjct: 140 TEEAKSFATENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNDTVGSSKPSGG 199
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ P QE SG+ S NCC
Sbjct: 200 PTISLTPAP-QEKRSGKNS-NCC 220
>gi|449543390|gb|EMD34366.1| hypothetical protein CERSUDRAFT_117145 [Ceriporiopsis subvermispora
B]
Length = 212
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 116/166 (69%), Positives = 142/166 (85%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 15 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K ++ NV RWL+ELR HAD NI+IMLVGNKSDL+ LRAVP
Sbjct: 75 ITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDLKHLRAVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL 166
T++AK FA + L F+ETSAL+++NVE AF T+LT+IYRIVS K+L
Sbjct: 135 TDEAKAFAAENALSFIETSALDASNVESAFQTILTDIYRIVSSKSL 180
>gi|302776382|ref|XP_002971361.1| rab family GTPase [Selaginella moellendorffii]
gi|300161343|gb|EFJ27959.1| rab family GTPase [Selaginella moellendorffii]
Length = 218
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 162/205 (79%), Gaps = 3/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LL+R++R+EF L+S+ATIGVEFQT+++VI K VKAQIWDTAGQER+RA
Sbjct: 17 LIGDSAVGKSNLLSRYSRNEFHLNSRATIGVEFQTQSMVIEGKEVKAQIWDTAGQERFRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAM+VYDI+++Q+F+NV RWLEELR ++D +++ MLVGNKSDLE+LR V
Sbjct: 77 VTSAYYRGAVGAMIVYDISQKQTFENVERWLEELRVYSDFSLVTMLVGNKSDLESLRQVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+A + AE+EGL F+ETSAL+STNV AF TV+ EI+ +VSKK L++ D S++G S
Sbjct: 137 IEEATDLAEREGLFFIETSALDSTNVAAAFETVIKEIFGMVSKKILSS-DSSKAGTLSGT 195
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K + G + +CC+S
Sbjct: 196 KKLG--LENGNSSKPQDSGLSCCSS 218
>gi|218201822|gb|EEC84249.1| hypothetical protein OsI_30694 [Oryza sativa Indica Group]
Length = 214
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 120/148 (81%), Positives = 131/148 (88%), Gaps = 1/148 (0%)
Query: 58 YRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLR 117
YRAVTSAYYRGAVGAMLVYDITKRQSFD+VARWLEELRGHADKNI+IML+GNKSDL TLR
Sbjct: 68 YRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLR 127
Query: 118 AVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGS 177
VPTEDAKEFAE+E L FMETSALESTNVE AF+TVLTEIYRIVSKK L AN+E +S G+
Sbjct: 128 VVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKNLVANEEVDSSGN 187
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCCTS 205
SSLLK T IVVPGQEP ++ +CC S
Sbjct: 188 SSLLKGTKIVVPGQEPAPPTKA-SCCMS 214
>gi|302505565|ref|XP_003014489.1| hypothetical protein ARB_07051 [Arthroderma benhamiae CBS 112371]
gi|302656407|ref|XP_003019957.1| hypothetical protein TRV_06003 [Trichophyton verrucosum HKI 0517]
gi|291178310|gb|EFE34100.1| hypothetical protein ARB_07051 [Arthroderma benhamiae CBS 112371]
gi|291183734|gb|EFE39333.1| hypothetical protein TRV_06003 [Trichophyton verrucosum HKI 0517]
Length = 230
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 125/216 (57%), Positives = 161/216 (74%), Gaps = 19/216 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +K+QIWDTAGQERYRA
Sbjct: 21 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDTAGQERYRA 80
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD++K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 81 ITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 140
Query: 121 TEDAKEFAEKE---------GLCFMETSALESTNVELAFLTVLT----EIYRIVSKKALT 167
TE+AK+FA + L F+ETSAL+++NVELAF +LT EI+RIVS KAL
Sbjct: 141 TEEAKQFAIPQLTLMVLGENNLSFIETSALDASNVELAFQNILTDLLAEIFRIVSSKALE 200
Query: 168 ANDESESGGSSSLLKATNIVVPGQEPESGRRSYNCC 203
+ D S++ L +V + P+S ++ CC
Sbjct: 201 SGD-----SSANQLGDRKVVEITKTPDSEKKQ-GCC 230
>gi|115464897|ref|NP_001056048.1| Os05g0516800 [Oryza sativa Japonica Group]
gi|46575955|gb|AAT01316.1| putative GTP-binding protein RIC2 [Oryza sativa Japonica Group]
gi|113579599|dbj|BAF17962.1| Os05g0516800 [Oryza sativa Japonica Group]
gi|215692843|dbj|BAG88185.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632234|gb|EEE64366.1| hypothetical protein OsJ_19207 [Oryza sativa Japonica Group]
Length = 220
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 123/205 (60%), Positives = 156/205 (76%), Gaps = 6/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EFSL+SK+TIGVEF T++L + K +KAQIWDTAGQERYRA
Sbjct: 22 LIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQIWDTAGQERYRA 81
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+R +FDNV RWL ELR H D +I+ ML+GNKSDL L AV
Sbjct: 82 ITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDPSIVCMLIGNKSDLRHLVAVS 141
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED KEFAE E + FMETSAL++TNV+ AF VLT+IY+IV+KK + A ++ GS+
Sbjct: 142 TEDGKEFAEAESMYFMETSALDATNVDNAFAEVLTQIYQIVNKKPVEAPED----GSAGP 197
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V ++ S + CC++
Sbjct: 198 GKGEKINV--KDDVSAMKRVGCCSN 220
>gi|15221477|ref|NP_172128.1| Ras-related protein RABA1a [Arabidopsis thaliana]
gi|114086|sp|P28185.1|RAA1A_ARATH RecName: Full=Ras-related protein RABA1a; Short=AtRABA1a; AltName:
Full=Ras-related protein Ara-2; AltName:
Full=Ras-related protein Rab11E; Short=AtRab11E
gi|8927677|gb|AAF82168.1|AC068143_10 Contains similarity to a Rab11 GTPase (Rab11a gene) from
Lycopersicon esculentum gb|AJ245570 and is a member of
the Ras family PF|00071. ESTs gb|T46264, gb|AI099600,
gb|AA404778, gb|AI997429, gb|T88574 come from this gene
[Arabidopsis thaliana]
gi|12083264|gb|AAG48791.1|AF332428_1 putative GTP-binding protein RAB11D [Arabidopsis thaliana]
gi|217835|dbj|BAA00829.1| small GTP-binding protein [Arabidopsis thaliana]
gi|17644169|gb|AAL38782.1| putative GTP-binding protein RAB11D [Arabidopsis thaliana]
gi|20465351|gb|AAM20079.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|332189861|gb|AEE27982.1| Ras-related protein RABA1a [Arabidopsis thaliana]
Length = 216
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 121/205 (59%), Positives = 155/205 (75%), Gaps = 6/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EF+L+SK+TIGVEF TKT + K VKAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+L+YD+T+ +F+N ARWL ELRGH D NI++ML+GNK DL L AV
Sbjct: 78 ITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCDLRHLVAVK 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK FAE+E L FMETSAL++TNVE AF VLT+I++IVSK+++ + GG S+
Sbjct: 138 TEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRSV------DGGGESAD 191
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
L + +E S + CC++
Sbjct: 192 LPGKGETINVKEDGSVLKRMGCCSN 216
>gi|255644368|gb|ACU22689.1| unknown [Glycine max]
Length = 193
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 118/166 (71%), Positives = 140/166 (84%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EF+L+SK+TIGVEF T+TL + K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D NI++MLVGNKSDL L AV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDANIVVMLVGNKSDLRHLVAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL 166
TED K +AEKE L FMETSALE+TNVE AF VLT+IY IVSKKA+
Sbjct: 138 TEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSKKAV 183
>gi|125552993|gb|EAY98702.1| hypothetical protein OsI_20633 [Oryza sativa Indica Group]
Length = 220
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 123/205 (60%), Positives = 156/205 (76%), Gaps = 6/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EFSL+SK+TIGVEF T++L + K +KAQIWDTAGQERYRA
Sbjct: 22 LIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQIWDTAGQERYRA 81
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+R +FDNV RWL ELR H D +I+ ML+GNKSDL L AV
Sbjct: 82 ITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDPSIVCMLIGNKSDLRHLVAVS 141
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED KEFAE E + FMETSAL++TNV+ AF VLT+IY+IV+KK + A ++ GS+
Sbjct: 142 TEDGKEFAEAESMYFMETSALDATNVDNAFAEVLTQIYQIVNKKPVEAPED----GSAGP 197
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V ++ S + CC++
Sbjct: 198 GKGEKINV--KDDVSAMKRVGCCSN 220
>gi|295658933|ref|XP_002790026.1| GTP-binding protein ypt3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282109|gb|EEH37675.1| GTP-binding protein ypt3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 220
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 124/203 (61%), Positives = 151/203 (74%), Gaps = 6/203 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 24 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 83
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD TK+Q+F N RWL+ELR HADKNI+IMLVGNK D + +R V
Sbjct: 84 ITSAYYRGAVGALLVYDTTKKQTFANCERWLKELREHADKNIVIMLVGNKIDEKHMRDVK 143
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T DA EFA++ L F+ETSAL++TNVELAF +LTEIYRIVS KAL E+G SS
Sbjct: 144 TSDAVEFADEMKLSFIETSALDATNVELAFQNILTEIYRIVSSKAL------ENGSSSQN 197
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
V+ + + CC
Sbjct: 198 PLGDRKVIEISKTQDADAKQKCC 220
>gi|115439059|ref|NP_001043809.1| Os01g0667600 [Oryza sativa Japonica Group]
gi|20161585|dbj|BAB90506.1| putative GTP-binding protein Rab11b [Oryza sativa Japonica Group]
gi|113533340|dbj|BAF05723.1| Os01g0667600 [Oryza sativa Japonica Group]
gi|125527190|gb|EAY75304.1| hypothetical protein OsI_03195 [Oryza sativa Indica Group]
gi|125571510|gb|EAZ13025.1| hypothetical protein OsJ_02946 [Oryza sativa Japonica Group]
gi|215767078|dbj|BAG99306.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 224
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 123/208 (59%), Positives = 153/208 (73%), Gaps = 10/208 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RFARDEFSL++++TIGVEF TKT+ + + VKAQIWDTAGQERYRA
Sbjct: 24 LIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVRVDDRLVKAQIWDTAGQERYRA 83
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYD+T+R +F+N RWL+ELR H D NI++MLVGNK+DL LRAVP
Sbjct: 84 ITSAYYRGAVGALVVYDVTRRITFENAERWLKELRDHTDANIVVMLVGNKADLRHLRAVP 143
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESES---GGS 177
EDA+ FAE G METSALE+TNVE AF VL +IYR+VS+ AL D+ + G +
Sbjct: 144 AEDARAFAEAHGTFSMETSALEATNVEGAFTEVLAQIYRVVSRNALDIGDDPAAPPRGRT 203
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCCTS 205
+ + V P S CC+S
Sbjct: 204 IDVSAKDDAVTPVN-------SSGCCSS 224
>gi|89257484|gb|ABD64975.1| Ras family GTP-binding protein [Brassica oleracea]
Length = 221
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 118/205 (57%), Positives = 156/205 (76%), Gaps = 2/205 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LLARFARDEF +SK+TIGVEFQT+ + I+ K +KAQIWDTAGQER+RA
Sbjct: 19 LIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQIWDTAGQERFRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA+LVYDI+++Q+F ++ RWL EL H+D N++ +LVGNKSDL+ +R VP
Sbjct: 79 VTSAYYRGAVGALLVYDISRQQTFQSIGRWLNELHTHSDMNVVTILVGNKSDLKGIREVP 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T + K AE +GL FMETSAL+S+NV AF TV+ EIY I+S+K +++ E +SL
Sbjct: 139 TSEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMSSQ-ELNKQDPASL 197
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+V+P +E ++ CC++
Sbjct: 198 SNGKKVVIPSEEQGESKKG-GCCST 221
>gi|115461617|ref|NP_001054408.1| Os05g0105100 [Oryza sativa Japonica Group]
gi|46359908|gb|AAS88840.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|52353601|gb|AAU44167.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113577959|dbj|BAF16322.1| Os05g0105100 [Oryza sativa Japonica Group]
gi|125550513|gb|EAY96222.1| hypothetical protein OsI_18113 [Oryza sativa Indica Group]
gi|215734964|dbj|BAG95686.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629896|gb|EEE62028.1| hypothetical protein OsJ_16810 [Oryza sativa Japonica Group]
Length = 220
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 123/205 (60%), Positives = 160/205 (78%), Gaps = 3/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF L+SK+TIGVEF T+TL + K +KAQIWDTAGQERYRA
Sbjct: 19 LIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIWDTAGQERYRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGA+GA+LVYD++K +FDN++RWL+ELR HAD NI IMLVGNK+DL+ LRAV
Sbjct: 79 ITSAYYRGALGAVLVYDVSKPTTFDNISRWLKELRDHADANIRIMLVGNKTDLKHLRAVA 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T+DA +FAE EGL ++ETSALE+TNVE AF +L +IYR +SKK + A+DE +G + +
Sbjct: 139 TDDAHKFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAISKKPV-ASDEGGAGAAGGV 197
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ I V + S ++ CC++
Sbjct: 198 KEGKTINVAAGDANSEKK--QCCST 220
>gi|8778562|gb|AAF79570.1|AC022464_28 F22G5.24 [Arabidopsis thaliana]
Length = 231
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 129/228 (56%), Positives = 155/228 (67%), Gaps = 36/228 (15%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVI-----------------HHK 43
LIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+TL + K
Sbjct: 17 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVISLLSLSLNLDNFPPDQFGK 76
Query: 44 NVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNII 103
VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDITKRQ+F+NV RWL ELR HAD NI+
Sbjct: 77 TVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIV 136
Query: 104 IMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSK 163
IM+ GNKSDL LR+V ED + AEKEGL F+ETSALE+TN+E AF T+L+EIY I+SK
Sbjct: 137 IMMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISK 196
Query: 164 KALTANDESESGGSSSLLKATNIVVPGQ------EPESGRRSYNCCTS 205
KAL A E+ G+ +PGQ S CC++
Sbjct: 197 KALAAQ---EAAGN----------LPGQGTAINISDSSATNRKGCCST 231
>gi|357136444|ref|XP_003569814.1| PREDICTED: ras-related protein RIC2-like isoform 1 [Brachypodium
distachyon]
gi|357136446|ref|XP_003569815.1| PREDICTED: ras-related protein RIC2-like isoform 2 [Brachypodium
distachyon]
gi|357136448|ref|XP_003569816.1| PREDICTED: ras-related protein RIC2-like isoform 3 [Brachypodium
distachyon]
Length = 222
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 158/205 (77%), Gaps = 6/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDS VGKS LL+RF ++EF L+SK+TIGVEF T++L + K VKAQIWDTAGQERYRA
Sbjct: 24 IIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQERYRA 83
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+R +FDNVARWL+ELR H D +I++MLVGNKSDL L AV
Sbjct: 84 ITSAYYRGAVGALLVYDVTRRSTFDNVARWLKELRDHTDPSIVVMLVGNKSDLRHLVAVS 143
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED +E+AE E L FMETSAL++TNV+ AF VLT+IY+I S+K + A ++ GS++
Sbjct: 144 TEDGQEYAEAESLYFMETSALDATNVDNAFAEVLTQIYQIASRKTVDAGED----GSAAP 199
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V ++ S + CC++
Sbjct: 200 SKGEKINV--KDDVSALKRVGCCSN 222
>gi|297848916|ref|XP_002892339.1| hypothetical protein ARALYDRAFT_887842 [Arabidopsis lyrata subsp.
lyrata]
gi|297338181|gb|EFH68598.1| hypothetical protein ARALYDRAFT_887842 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 120/205 (58%), Positives = 155/205 (75%), Gaps = 6/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EF+L+SK+TIGVEF TKT + K VKAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+L+YD+T+ +F+N ARWL ELRGH D NI++ML+GNK DL L AV
Sbjct: 78 ITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCDLRHLVAVK 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK FAE+E L FMETSAL++TNVE AF VL++I++IVSK+++ + GG S+
Sbjct: 138 TEEAKAFAERESLYFMETSALDATNVESAFTEVLSQIHKIVSKRSV------DGGGDSTE 191
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
L + +E S + CC++
Sbjct: 192 LPGKGETINVKEDGSVLKRMGCCSN 216
>gi|357135860|ref|XP_003569526.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 219
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 119/171 (69%), Positives = 140/171 (81%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RFARDEFSLD+++TIGVEF TKT+ + K VKAQIWDTAGQERYRA
Sbjct: 19 LIGDSGVGKSNLLSRFARDEFSLDTRSTIGVEFATKTVQVDGKLVKAQIWDTAGQERYRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYD+T+ +F+N RWL ELR H D NI++MLVGNK+DL LRAVP
Sbjct: 79 ITSAYYRGAVGALVVYDVTRHITFENAERWLAELRDHTDANIVVMLVGNKADLRHLRAVP 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDE 171
E+A+ FAE+ METSALESTNVE AF VL EIYR+VSKKAL D+
Sbjct: 139 PEEARAFAERHRTFSMETSALESTNVEGAFTEVLGEIYRVVSKKALDIGDD 189
>gi|302811619|ref|XP_002987498.1| rab family GTPase [Selaginella moellendorffii]
gi|300144652|gb|EFJ11334.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 115/171 (67%), Positives = 143/171 (83%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKLIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+EL+ H D NI++MLVGNKSDL LR V
Sbjct: 77 ITSAYYRGAVGALLVYDVTRLATFENVERWLKELKDHTDSNIVVMLVGNKSDLRHLRCVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDE 171
TED + ++EKEGL FMETSALES NVE +F +LT+IYR+VSKKAL ++
Sbjct: 137 TEDGQAYSEKEGLYFMETSALESVNVENSFKQILTQIYRVVSKKALDVGED 187
>gi|210075737|ref|XP_502830.2| YALI0D14630p [Yarrowia lipolytica]
gi|199425807|emb|CAG81018.2| YALI0D14630p [Yarrowia lipolytica CLIB122]
Length = 212
Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 119/204 (58%), Positives = 157/204 (76%), Gaps = 5/204 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDS VGK+ +L RF RDEF+LDSK+TIGVEF T+T+ I +K +KAQIWDTAGQERYRA
Sbjct: 13 MIGDSGVGKTNILGRFTRDEFNLDSKSTIGVEFATRTVNIDNKIIKAQIWDTAGQERYRA 72
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+L+YD+T QS+ N++RWL+EL+ HAD NI++MLVGNK DL+ LRAVP
Sbjct: 73 ITSAYYRGAVGALLLYDVTSTQSYKNISRWLQELQDHADSNIVLMLVGNKCDLKHLRAVP 132
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIY-RIVSKKALTANDESESGGSSS 179
TE+AK+FA + L F+ETSAL+ T+V LAF +LTEIY R+ + + + AN E S
Sbjct: 133 TEEAKQFASQNKLLFIETSALDGTDVALAFRNILTEIYHRVSAAENVHANLED----SRK 188
Query: 180 LLKATNIVVPGQEPESGRRSYNCC 203
+ T I + Q +S ++S +CC
Sbjct: 189 PQQGTTISLTPQPGDSDKKSSSCC 212
>gi|224068050|ref|XP_002302656.1| predicted protein [Populus trichocarpa]
gi|222844382|gb|EEE81929.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 118/186 (63%), Positives = 144/186 (77%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGK+Q+L+RF +DEF DSK+TIGVEFQT+T+ I K +KAQIWDTAGQERYRA
Sbjct: 24 VIGDSAVGKTQILSRFTKDEFCFDSKSTIGVEFQTRTVTIKGKVIKAQIWDTAGQERYRA 83
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA+GAML+YDITKR +FD+V RW++ELR HAD +I+IML+GNK DL LRAVP
Sbjct: 84 VTSAYYRGALGAMLLYDITKRPTFDHVVRWVDELRAHADNSIVIMLIGNKVDLVDLRAVP 143
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
EDA EFAE +GL F ETSA NV+ AF +L EIY V KKAL + + + +
Sbjct: 144 AEDAVEFAEDQGLFFSETSAFSGDNVDSAFFRLLEEIYDTVCKKALECGNGNSNVADAIT 203
Query: 181 LKATNI 186
LK + I
Sbjct: 204 LKGSKI 209
>gi|302822293|ref|XP_002992805.1| rab family GTPase [Selaginella moellendorffii]
gi|300139353|gb|EFJ06095.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 115/171 (67%), Positives = 143/171 (83%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKLIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+EL+ H D NI++MLVGNKSDL LR V
Sbjct: 77 ITSAYYRGAVGALLVYDVTRLVTFENVERWLKELKDHTDSNIVVMLVGNKSDLRHLRCVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDE 171
TED + ++EKEGL FMETSALES NVE +F +LT+IYR+VSKKAL ++
Sbjct: 137 TEDGQAYSEKEGLYFMETSALESVNVENSFKQILTQIYRVVSKKALDVGED 187
>gi|336367947|gb|EGN96291.1| hypothetical protein SERLA73DRAFT_185967 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380674|gb|EGO21827.1| hypothetical protein SERLADRAFT_474770 [Serpula lacrymans var.
lacrymans S7.9]
Length = 210
Score = 246 bits (627), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 122/204 (59%), Positives = 153/204 (75%), Gaps = 9/204 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF +DSK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 15 LIGDSGVGKSNLLSRFTRNEFHVDSKSTIGVEFATRSINVDGKTVKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K ++D+V RWL+ELR HAD NI+IMLVGNKSDL+ LRAVP
Sbjct: 75 ITSAYYRGAVGALLVYDIAKHATYDSVTRWLKELRDHADSNIVIMLVGNKSDLKHLRAVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL-TANDESESGGSSS 179
TE+AK F+ + L F+ETSAL+++NV+ AF T+LT IYRIVS K+L + D + S +
Sbjct: 135 TEEAKAFSTENELSFIETSALDASNVDSAFQTILTGIYRIVSSKSLEQSADPIRAPTSDT 194
Query: 180 LLKATNIVVPGQEPESGRRSYNCC 203
+ A + P Q CC
Sbjct: 195 IPVAIDSSAPSQS--------KCC 210
>gi|224139494|ref|XP_002323139.1| predicted protein [Populus trichocarpa]
gi|222867769|gb|EEF04900.1| predicted protein [Populus trichocarpa]
Length = 224
Score = 246 bits (627), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 122/207 (58%), Positives = 154/207 (74%), Gaps = 3/207 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LLARFARDEF +SK+TIGVEFQT+ + I+ K +KAQIWDTAGQER+RA
Sbjct: 19 LIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQIWDTAGQERFRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA+LVYDI++RQ+FD+V RWL EL H+D N++ +LVGNKSDL+ R VP
Sbjct: 79 VTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNVVTILVGNKSDLKDAREVP 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T + K+ AE +GL FMETSAL+S+NV AF TV+ EIY I+S+K + + E G+ L
Sbjct: 139 TVEGKDLAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILSRKVILSQ-ELNKPGAPEL 197
Query: 181 LKATNIVVPGQEPESGR--RSYNCCTS 205
+V+ G + G CC+S
Sbjct: 198 GNGKTVVLQGDGNQEGNAETKKGCCSS 224
>gi|332375364|gb|AEE62823.1| unknown [Dendroctonus ponderosae]
Length = 213
Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 115/169 (68%), Positives = 142/169 (84%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD+NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAN 169
T++AK +AE+ L F+ETSAL+STNVE AF +LTEIYR VS + + +
Sbjct: 136 TDEAKAYAERNQLSFIETSALDSTNVEAAFTNILTEIYRSVSTRQVPPD 184
>gi|351720917|ref|NP_001237704.1| uncharacterized protein LOC100305599 [Glycine max]
gi|255626033|gb|ACU13361.1| unknown [Glycine max]
Length = 218
Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 120/206 (58%), Positives = 159/206 (77%), Gaps = 3/206 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL++K+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 15 LIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSVPVDSKLVKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYD+T+ +F+NV RWL+ELR H + +++MLVGNK+DL LRAV
Sbjct: 75 ITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTEAYVVVMLVGNKADLRHLRAVS 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+A EFAEKE + FMETSALES NV+ AF+ VLT+IY +VS+K L D+ S + +L
Sbjct: 135 TEEATEFAEKESIYFMETSALESLNVDNAFIEVLTQIYNVVSRKTLETVDDDPS--TKAL 192
Query: 181 LKATNIVVPGQEPE-SGRRSYNCCTS 205
K IV+ ++ + S + CC++
Sbjct: 193 PKGETIVIGTKDDDVSAVKKSGCCST 218
>gi|440804360|gb|ELR25237.1| RAB11B protein, putative [Acanthamoeba castellanii str. Neff]
Length = 213
Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 155/205 (75%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R++F+L+SK+TIGVEF T+++ K +KAQIWDTAGQERYRA
Sbjct: 15 LIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATRSIKCDSKTIKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K +++NV RWL ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 75 ITSAYYRGAVGALLVYDISKAVTYENVERWLNELRDHADSNIVIMLVGNKSDLRHLRAVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVS--KKALTANDESESGGSS 178
TE A AEK GL F+ETSAL+STNVELAF +LTEI+ IV+ K+ T D S
Sbjct: 135 TEQAAALAEKHGLSFIETSALDSTNVELAFQKILTEIFHIVNGGKQLETKKD------SQ 188
Query: 179 SLLKATNIVVPGQEPESGRRSYNCC 203
S+ T +V G +P + +++ CC
Sbjct: 189 SVDGETEVVQVGGDP-APKKAGACC 212
>gi|154277098|ref|XP_001539394.1| Rab1a [Ajellomyces capsulatus NAm1]
gi|150414467|gb|EDN09832.1| Rab1a [Ajellomyces capsulatus NAm1]
gi|225554603|gb|EEH02899.1| GTP-binding protein ypt3 [Ajellomyces capsulatus G186AR]
gi|240276947|gb|EER40457.1| GTP-binding protein [Ajellomyces capsulatus H143]
gi|325094881|gb|EGC48191.1| GTP-binding protein ypt3 [Ajellomyces capsulatus H88]
Length = 210
Score = 245 bits (625), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 123/203 (60%), Positives = 148/203 (72%), Gaps = 6/203 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD TK Q+F N RWL+ELR HADKNI+IMLVGNK D + +RA+
Sbjct: 74 ITSAYYRGAVGALLVYDTTKEQTFANCERWLKELREHADKNIVIMLVGNKIDQKHVRAIK 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T+ EFAE L F+ETSAL++TNVELAF +LTEIYRIVS KAL E+G S
Sbjct: 134 TDQGAEFAEARKLSFIETSALDATNVELAFQNILTEIYRIVSSKAL------ENGNSGQN 187
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
VV + + CC
Sbjct: 188 PLGDRKVVEITKSQDADAKQKCC 210
>gi|119389963|pdb|2HV8|A Chain A, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
gi|119389965|pdb|2HV8|B Chain B, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
gi|119389967|pdb|2HV8|C Chain C, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
Length = 172
Score = 245 bits (625), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 115/160 (71%), Positives = 138/160 (86%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAG ERYRA
Sbjct: 13 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGLERYRA 72
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 73 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 132
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRI 160
T++A+ FAEK GL F+ETSAL+STNVE AF T+LTEIYRI
Sbjct: 133 TDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 172
>gi|21536533|gb|AAM60865.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
Length = 216
Score = 245 bits (625), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 119/172 (69%), Positives = 141/172 (81%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+ F ++EFSL+SK+TIGVEF T++L + K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSLFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV WL+ELR H D NI++MLVGNKSDL L AV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDLRHLVAVQ 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDES 172
TEDAK FAEKE L FMETSA E+TNVE AF VLT+I+ IVSKKA+ A ES
Sbjct: 138 TEDAKSFAEKESLYFMETSAFEATNVENAFAEVLTQIHHIVSKKAMEAASES 189
>gi|212723196|ref|NP_001131362.1| uncharacterized protein LOC100192685 [Zea mays]
gi|194691316|gb|ACF79742.1| unknown [Zea mays]
gi|195612658|gb|ACG28159.1| ras-related protein RGP2 [Zea mays]
gi|413948932|gb|AFW81581.1| Ras protein RGP2 [Zea mays]
Length = 217
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 116/164 (70%), Positives = 138/164 (84%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+ FSLDSK+TIGVEF TK+L I K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQIDGKTIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAV A+LVYDITKRQSFDNV RWL ELR HAD +I+IM+VGNKSDL LRA+
Sbjct: 77 ITSAYYRGAVAALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMVGNKSDLIHLRAIS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKK 164
++ K AEKEGL F+ETSA+E+ NVE AF T++TE+Y IV++K
Sbjct: 137 EDEGKALAEKEGLFFLETSAMEAINVEEAFQTIITEVYGIVNRK 180
>gi|388513607|gb|AFK44865.1| unknown [Lotus japonicus]
Length = 196
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 114/161 (70%), Positives = 139/161 (86%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF L+SK+TIGVEF T+TL + + VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLEVEGRMVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGA+GA+LVYD+TK SF+NV RWL+ELR HAD NI+IML+GNK+DL+ LR V
Sbjct: 77 ITSAYYRGALGALLVYDVTKPTSFENVTRWLKELRDHADANIVIMLIGNKTDLKHLRGVA 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIV 161
TEDA+ +AEKEGL F+ETSALE+TNV+ AF T+L +IYRI+
Sbjct: 137 TEDAQSYAEKEGLSFIETSALEATNVDKAFQTILAQIYRII 177
>gi|261194555|ref|XP_002623682.1| Rab1a [Ajellomyces dermatitidis SLH14081]
gi|239588220|gb|EEQ70863.1| Rab1a [Ajellomyces dermatitidis SLH14081]
gi|239613500|gb|EEQ90487.1| Rab1a [Ajellomyces dermatitidis ER-3]
Length = 210
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 123/203 (60%), Positives = 148/203 (72%), Gaps = 6/203 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD TK Q+F N RWL+ELR HADKNI+IMLVGNK D + +RA+
Sbjct: 74 ITSAYYRGAVGALLVYDTTKEQTFANCERWLKELREHADKNIVIMLVGNKIDQKHVRAIK 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T+ EFAE L F+ETSAL++TNVELAF +LTEIYRIVS KAL E+G S
Sbjct: 134 TDQGAEFAETRKLSFIETSALDATNVELAFQNILTEIYRIVSSKAL------ENGTSGQN 187
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
VV + + CC
Sbjct: 188 PLGDRKVVEITKSQDADAKQKCC 210
>gi|327357374|gb|EGE86231.1| Rab1a [Ajellomyces dermatitidis ATCC 18188]
Length = 209
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 123/203 (60%), Positives = 148/203 (72%), Gaps = 6/203 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 13 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 72
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD TK Q+F N RWL+ELR HADKNI+IMLVGNK D + +RA+
Sbjct: 73 ITSAYYRGAVGALLVYDTTKEQTFANCERWLKELREHADKNIVIMLVGNKIDQKHVRAIK 132
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T+ EFAE L F+ETSAL++TNVELAF +LTEIYRIVS KAL E+G S
Sbjct: 133 TDQGAEFAETRKLSFIETSALDATNVELAFQNILTEIYRIVSSKAL------ENGTSGQN 186
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
VV + + CC
Sbjct: 187 PLGDRKVVEITKSQDADAKQKCC 209
>gi|218204|dbj|BAA02437.1| GTP binding protein [Oryza sativa Japonica Group]
gi|446772|prf||1912297A rgp2 gene
Length = 217
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 115/163 (70%), Positives = 138/163 (84%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGD+ VGKS +L+RF R+ FSLDSK+TIGVEF TK+L + K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDTGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITKRQSFDNV RWL ELR HAD +I+IM+VGNKSDL LRAV
Sbjct: 77 ITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMVGNKSDLIHLRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSK 163
++ K AEKEGL F+ETSA+E+ NVE AF T++TE+Y IV++
Sbjct: 137 EDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNR 179
>gi|302756057|ref|XP_002961452.1| rab family GTPase [Selaginella moellendorffii]
gi|300170111|gb|EFJ36712.1| rab family GTPase [Selaginella moellendorffii]
Length = 218
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 115/169 (68%), Positives = 148/169 (87%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LL+R++R+EF L+S+ATIGVEFQT+++VI K VKAQIWDTAGQER+RA
Sbjct: 17 LIGDSAVGKSNLLSRYSRNEFHLNSRATIGVEFQTQSMVIEGKEVKAQIWDTAGQERFRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGAM+VYDI+++Q+F+NV RWLEELR ++D +++ MLVGNKSDLE+LR V
Sbjct: 77 VTSAYYRGAVGAMIVYDISQKQTFENVERWLEELRVYSDFSLVTMLVGNKSDLESLRQVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAN 169
E+A + AE+EGL F+ETSAL+STNV AF TV+ EI+ +VSKK L+++
Sbjct: 137 IEEATDLAEREGLFFIETSALDSTNVAAAFETVIKEIFGMVSKKILSSD 185
>gi|170094506|ref|XP_001878474.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646928|gb|EDR11173.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 211
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 115/166 (69%), Positives = 142/166 (85%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 15 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K ++ NV RWL+ELR HAD NI+IMLVGNKSDL+ LRAV
Sbjct: 75 ITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDLKHLRAVT 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL 166
T++AK F+ + GL F+ETSAL+++NVE AF T+LT+IYRIVS K+L
Sbjct: 135 TDEAKAFSTENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSL 180
>gi|162464222|ref|NP_001105299.1| small GTP binding protein1 [Zea mays]
gi|1020092|dbj|BAA06701.1| mgp1 GTP-binding protein [Zea mays]
Length = 211
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 126/205 (61%), Positives = 153/205 (74%), Gaps = 12/205 (5%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGD AVGKSQLL+ FAR+EFSLDSK TIGVEF T+++ K VKAQIWDTAGQERY A
Sbjct: 18 VIGDDAVGKSQLLSGFARNEFSLDSKGTIGVEFATRSIRFEDKVVKAQIWDTAGQERYLA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGA GA+LVYD+T+ +F+ V RWL+ELR H D NI+IMLVGNK+DL LRAV
Sbjct: 78 ITSAYYRGAAGALLVYDVTRHATFETVGRWLKELRDHTDSNIVIMLVGNKADLRHLRAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAK FAEKE + FMETSA + TNV+ +F T+LT+IYRI+SKK+L A+ +S + L
Sbjct: 138 TEDAKAFAEKESIFFMETSA-QDTNVKTSFETLLTDIYRILSKKSLVADTYVDSLTVARL 196
Query: 181 LKATNIVV-PGQEPESGRRSYNCCT 204
L T I V PG CC+
Sbjct: 197 LGGTKISVGPG----------GCCS 211
>gi|449015743|dbj|BAM79145.1| small GTP-binding protein of Rab family [Cyanidioschyzon merolae
strain 10D]
Length = 224
Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 119/208 (57%), Positives = 157/208 (75%), Gaps = 4/208 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVQTDGKVIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+KR SF+N RWL+ELR HAD+NI+IMLVGNKSDL+ LRAV
Sbjct: 77 ITSAYYRGAVGALLVYDISKRSSFENAERWLKELRDHADQNIVIMLVGNKSDLKHLRAVT 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND----ESESGG 176
TE+ +++A+ GL F+ETSAL++++VE AF+ +LT+IYR+V K+ L + D +S SG
Sbjct: 137 TEEGQQYADARGLSFIETSALDASHVEEAFVRILTDIYRLVHKRHLASGDPTVAKSASGA 196
Query: 177 SSSLLKATNIVVPGQEPESGRRSYNCCT 204
+ I V ++ CC+
Sbjct: 197 VYQAGRGETISVGNLSHDNRSSKRKCCS 224
>gi|42543202|pdb|1OIV|A Chain A, X-Ray Structure Of The Small G Protein Rab11a In Complex
With Gdp
gi|42543203|pdb|1OIV|B Chain B, X-Ray Structure Of The Small G Protein Rab11a In Complex
With Gdp
Length = 191
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 114/158 (72%), Positives = 137/158 (86%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 34 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 93
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 94 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 153
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIY 158
T++A+ FAEK GL F+ETSAL+STNVE AF T+LTEIY
Sbjct: 154 TDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 191
>gi|323451541|gb|EGB07418.1| hypothetical protein AURANDRAFT_6384 [Aureococcus anophagefferens]
Length = 186
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 113/168 (67%), Positives = 142/168 (84%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSLDSK+TIGVEF TK++V K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFSLDSKSTIGVEFATKSIVAEGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+TK +F+NV RWL+ELR HA+ NI++MLVGNKSDL+ RAVP
Sbjct: 76 ITSAYYRGAVGALLVYDLTKHATFENVERWLKELRDHAEANIVVMLVGNKSDLKPQRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTA 168
TE+A AE+ L F+ETSAL+++ V++AF +LTEIYR+++KK L +
Sbjct: 136 TEEAMAMAEQHNLAFIETSALDASGVDIAFQNILTEIYRLMNKKQLAS 183
>gi|168062057|ref|XP_001783000.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162665517|gb|EDQ52199.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/208 (58%), Positives = 155/208 (74%), Gaps = 14/208 (6%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LL+R+AR+EF+ +SKATIGVEFQT+++ I K VKAQIWDTAGQER+RA
Sbjct: 17 LIGDSAVGKSNLLSRYARNEFNSNSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA++V+DIT+R +F+NV+RWL+EL+ H+D ++++MLVGNKSDL +R V
Sbjct: 77 VTSAYYRGAVGALIVFDITRRGTFENVSRWLDELKVHSDSSVVVMLVGNKSDLAHIREVT 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+A AE + FMETSALES NV AF TVL EI++IVSKKALTA+
Sbjct: 137 VEEATALAENNAMSFMETSALESVNVAEAFQTVLKEIHKIVSKKALTADPN--------- 187
Query: 181 LKATNIVVPGQEPESGR----RSYNCCT 204
K+ +V GQ G R+ CC+
Sbjct: 188 -KSNTVVASGQRLAGGDDTTPRTGGCCS 214
>gi|357135067|ref|XP_003569133.1| PREDICTED: ras-related protein RABA2a-like [Brachypodium
distachyon]
Length = 229
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 155/205 (75%), Gaps = 2/205 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF L+SK+TIGVEF T+TL + K +KAQIWDTAGQERYRA
Sbjct: 27 LIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIWDTAGQERYRA 86
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGA+GA+LVYD++K +F+N++RWL+ELR HAD NI IMLVGNK+DL+ LRAV
Sbjct: 87 ITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHADANIRIMLVGNKTDLKHLRAVA 146
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T+D + FAE EGL ++ETSALE+TNVE AF +L +IYR +SKKA+ +D G +
Sbjct: 147 TDDGQSFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAISKKAVALDDGGAGGAGGGV 206
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ I V + ++ CC++
Sbjct: 207 KEGKTINVAASDTSGEKK--QCCSA 229
>gi|1707014|gb|AAC69136.1| putative GTP-binding protein [Arabidopsis thaliana]
Length = 219
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/206 (59%), Positives = 154/206 (74%), Gaps = 5/206 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKT-LVIHHKNVKAQIWDTAGQERYR 59
L GDS VGKS LL+RF R++FS DS++TIGVEF T+ + + K VKAQIWDTAGQERYR
Sbjct: 18 LTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRRGIQVDDKIVKAQIWDTAGQERYR 77
Query: 60 AVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAV 119
A+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D N +IMLVGNK+DL LRA+
Sbjct: 78 AITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIMLVGNKADLNHLRAI 137
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSS 179
TE+ K+FAE+E FMETSALE+ NVE AF VLT+IYR+VSKKAL A D+ +++
Sbjct: 138 STEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSKKALDAGDDP----TTA 193
Query: 180 LLKATNIVVPGQEPESGRRSYNCCTS 205
L K I V ++ S + CC +
Sbjct: 194 LPKGQMINVGSRDDVSAVKKSGCCAT 219
>gi|344303781|gb|EGW34030.1| GTP-binding protein YPT32/YPT11 [Spathaspora passalidarum NRRL
Y-27907]
Length = 222
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 116/203 (57%), Positives = 152/203 (74%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF RDEF+L+S++TIGVEF T+TL I K VKAQIWDTAGQERYRA
Sbjct: 20 LIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI K +S+++V+RWL+EL+ HAD NI+I LVGNKSDL+ LRAVP
Sbjct: 80 ITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADSNIVIELVGNKSDLDHLRAVP 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK FA++ L F+E SAL S NV+L+F +L IY ++SK L N++ ++
Sbjct: 140 TEEAKNFAQENNLLFIEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNEQGGVNKPTTA 199
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
T + P + + + + CC
Sbjct: 200 GGPTISLTPAPQSKKNKNNGGCC 222
>gi|449443538|ref|XP_004139534.1| PREDICTED: ras-related protein RABA5a-like [Cucumis sativus]
gi|449508980|ref|XP_004163459.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA5a-like
[Cucumis sativus]
Length = 224
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 121/210 (57%), Positives = 156/210 (74%), Gaps = 9/210 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LLARFARDEF +SK+TIGVEFQT+ + I+ K +KAQIWDTAGQER+RA
Sbjct: 19 LIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIEINGKEIKAQIWDTAGQERFRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA+LVYDI++RQ+FD++ RWL EL H+D N++ +LVGNKSDL+ R VP
Sbjct: 79 VTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVP 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T + K AE +GL F+ETSAL+S+NV AF TV+ EIY I+S+K + + + + S
Sbjct: 139 TAEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKVMISQELKKQDVSWME 198
Query: 181 LKATNIVVPGQ-----EPESGRRSYNCCTS 205
T +V+ G+ EP+ G CC+S
Sbjct: 199 NGKTTVVIQGEDQVEGEPKKG----GCCSS 224
>gi|326521852|dbj|BAK04054.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 225
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 156/205 (76%), Gaps = 3/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF L+SK+TIGVEF T+TL + K +KAQIWDTAGQERYRA
Sbjct: 24 LIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIWDTAGQERYRA 83
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGA+GA+LVYD+TK +F+N++RWL+ELR HAD NI IMLVGNK+DL+ LRAV
Sbjct: 84 ITSAYYRGALGAVLVYDVTKPTTFENISRWLKELRDHADANIRIMLVGNKTDLKHLRAVT 143
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T+DA +AE EGL ++ETSALE+ NVE AF +L +IYR +SKKA+ + E + ++ +
Sbjct: 144 TDDAGSYAEAEGLSYIETSALEAMNVEEAFQLILGDIYRTISKKAVAS--EEDRAAAAGV 201
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ I V + G + CC++
Sbjct: 202 KEGKTINVAATASDGGEKK-QCCSA 225
>gi|358343344|ref|XP_003635764.1| Ras-related protein Rab11B [Medicago truncatula]
gi|355501699|gb|AES82902.1| Ras-related protein Rab11B [Medicago truncatula]
gi|388505920|gb|AFK41026.1| unknown [Medicago truncatula]
Length = 215
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 123/206 (59%), Positives = 158/206 (76%), Gaps = 6/206 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ I K VKAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRILDKLVKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD T+ +F+NV RWL+ELR H D ++IMLVGNK+DL+ L+AV
Sbjct: 76 ITSAYYRGAVGALLVYDSTRHVTFENVERWLKELRDHTDAYVVIMLVGNKADLKHLQAVS 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+A FAEKE + FMETSALES NV+ AF+ VLT+IY +VSKK L + GS+S+
Sbjct: 136 TEEATTFAEKENIYFMETSALESLNVDNAFVEVLTQIYNVVSKKTL-----EKENGSASV 190
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
K I + G++ S + CC+++
Sbjct: 191 PKGETINI-GKDDVSDVKKSGCCSTA 215
>gi|328773631|gb|EGF83668.1| hypothetical protein BATDEDRAFT_85182 [Batrachochytrium
dendrobatidis JAM81]
Length = 213
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 120/206 (58%), Positives = 156/206 (75%), Gaps = 9/206 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RFAR+EF+ DSK+TIGVEF T+++ K +K+QIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKSNLLSRFARNEFNQDSKSTIGVEFATRSIEFDGKTIKSQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+++++F++V RWL+ELR HAD +I+IMLVGNKSDL++LRAVP
Sbjct: 74 ITSAYYRGAVGALLVYDISQQKTFESVERWLKELRDHADASIVIMLVGNKSDLKSLRAVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AKEFA + L FMETSAL+ NVE AF +L +Y++VS KA+ +ES +
Sbjct: 134 TEEAKEFATRNQLLFMETSALDGGNVETAFQDILANVYKVVSNKAM--ENESNRVATGPG 191
Query: 181 LKATNIVVP---GQEPESGRRSYNCC 203
+ V P +P SG+ CC
Sbjct: 192 AGKSITVAPTTTNAKPASGK----CC 213
>gi|50412303|ref|XP_457123.1| DEHA2B03696p [Debaryomyces hansenii CBS767]
gi|49652788|emb|CAG85116.1| DEHA2B03696p [Debaryomyces hansenii CBS767]
Length = 220
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 118/203 (58%), Positives = 151/203 (74%), Gaps = 2/203 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF RDEF+L+S++TIGVEF T+TL I K VKAQIWDTAGQERYRA
Sbjct: 20 LIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI+K +S+++V+RWL+EL+ HAD NI+I LVGNKSDL+ LRAVP
Sbjct: 80 ITSAYYRGAVGALIVYDISKAESYESVSRWLKELKEHADANIVIELVGNKSDLDHLRAVP 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK FA + L F E SAL S NV+L+F +L IY ++SK L N+ S S
Sbjct: 140 TDEAKNFANENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNEGSNGNKPSG- 198
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
T + P + + + + NCC
Sbjct: 199 -GPTISLTPAPQEKKSKNNSNCC 220
>gi|448122797|ref|XP_004204534.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
gi|448125077|ref|XP_004205092.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
gi|358249725|emb|CCE72791.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
gi|358350073|emb|CCE73352.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
Length = 220
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 121/207 (58%), Positives = 152/207 (73%), Gaps = 10/207 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF RDEF+L+S++TIGVEF T+TL I K VKAQIWDTAGQERYRA
Sbjct: 20 LIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI+K +S+++V+RWL+EL+ HAD NI+I LVGNKSDL+ LRAVP
Sbjct: 80 ITSAYYRGAVGALIVYDISKTESYESVSRWLKELKEHADANIVIELVGNKSDLDHLRAVP 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALT----ANDESESGG 176
T++AK FA + L F E SAL S NV+L+F +L IY ++SK L AN SGG
Sbjct: 140 TDEAKNFANENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTSDGANANKPSGG 199
Query: 177 SSSLLKATNIVVPGQEPESGRRSYNCC 203
T + P + + + S NCC
Sbjct: 200 ------PTISLTPAPQEKKSKSSSNCC 220
>gi|146414846|ref|XP_001483393.1| hypothetical protein PGUG_04122 [Meyerozyma guilliermondii ATCC
6260]
Length = 218
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 118/203 (58%), Positives = 150/203 (73%), Gaps = 4/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGD VGKS LL+RF RDEF+L+S++TIGVEF T+TL I + VKAQIWDTAGQERYRA
Sbjct: 20 LIGDLGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGRRVKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI K +S+++V+RWL+EL+ HAD NI+I LVGNKSDL+ LRAVP
Sbjct: 80 ITSAYYRGAVGALIVYDILKTESYESVSRWLKELKEHADTNIVIELVGNKSDLDHLRAVP 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK FA + L F E SAL S NV+L+F +L IY ++SK L ND+ S
Sbjct: 140 TEEAKLFANENSLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNDQGAQKPSGPT 199
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ T P + + G+ + NCC
Sbjct: 200 ISLT----PAPQEKKGKNNSNCC 218
>gi|124513178|ref|XP_001349945.1| Rab11a, GTPase [Plasmodium falciparum 3D7]
gi|1220272|emb|CAA63652.1| small GTPase rab11 [Plasmodium falciparum 3D7]
gi|23615362|emb|CAD52353.1| Rab11a, GTPase [Plasmodium falciparum 3D7]
Length = 216
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 120/204 (58%), Positives = 157/204 (76%), Gaps = 4/204 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVI-HHKNVKAQIWDTAGQERYR 59
LIGDS VGKS LL+RF RDEF+L+SK+TIGVEF TK++ + ++K +KAQIWDTAGQERYR
Sbjct: 16 LIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDTAGQERYR 75
Query: 60 AVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAV 119
A+TSAYYRGAVGA+LVYDITK+ SF+N+ +WL+ELR +AD NI+I+LVGNKSDL+ LR +
Sbjct: 76 AITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGNKSDLKHLRVI 135
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSS 179
DA ++A+KE L F+ETSALE+TNVELAF +L EIY + KK T ND++ S
Sbjct: 136 NDNDATQYAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQATKNDDNLSIQPRG 195
Query: 180 LLKATNIVVPGQEPESGRRSYNCC 203
K N+ + E+ +++ CC
Sbjct: 196 --KKINVDDDNDKNETKKKN-KCC 216
>gi|226529503|ref|NP_001151078.1| ras-related protein Rab11C [Zea mays]
gi|226958337|ref|NP_001152941.1| ras-related protein Rab11C [Zea mays]
gi|195629564|gb|ACG36423.1| ras-related protein Rab11C [Zea mays]
gi|195644124|gb|ACG41530.1| ras-related protein Rab11C [Zea mays]
gi|223973589|gb|ACN30982.1| unknown [Zea mays]
Length = 219
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 156/205 (76%), Gaps = 3/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF L+SK+TIGVEF T+TL + K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGA+GA+LVYD++K +F+N++RWL+ELR HAD N IMLVGNK+DL LRAV
Sbjct: 78 ITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHADSNTRIMLVGNKTDLRHLRAVA 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T+DA+ FAE EGL ++ETSALE+TNVE AF +L +IYR VSKK + A+DE +G
Sbjct: 138 TDDARSFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAVSKKPV-ASDEVGAGQGGVK 196
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
T V G + + ++ CC++
Sbjct: 197 EGKTIDVATGADAAAHKK--QCCSA 219
>gi|356549876|ref|XP_003543316.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 218
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 119/206 (57%), Positives = 158/206 (76%), Gaps = 3/206 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL++K+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 15 LIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSVPVDSKLVKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYD+T+ +F+NV RWL+ELR H + +++MLVGNK+DL LRAV
Sbjct: 75 ITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRDHTEAYVVVMLVGNKADLRHLRAVS 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+A E+AEKE + FMETSALES NV AF+ VLT+IY +VS+K L D+ + S +L
Sbjct: 135 TEEATEYAEKENIYFMETSALESLNVGNAFVEVLTQIYNVVSRKTLETMDDDPN--SKAL 192
Query: 181 LKATNIVVPGQEPE-SGRRSYNCCTS 205
K IV+ ++ + S + CC++
Sbjct: 193 PKGETIVIGTKDDDVSAVKKSGCCST 218
>gi|242087345|ref|XP_002439505.1| hypothetical protein SORBIDRAFT_09g008430 [Sorghum bicolor]
gi|241944790|gb|EES17935.1| hypothetical protein SORBIDRAFT_09g008430 [Sorghum bicolor]
Length = 217
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 114/163 (69%), Positives = 138/163 (84%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+ FSLDSK+TIGVEF TK+L + K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMDGKTIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITKRQSF+NV RWL ELR HAD +I+IM+VGNKSDL LRA+
Sbjct: 77 ITSAYYRGAVGALLVYDITKRQSFENVHRWLRELRDHADSSIVIMMVGNKSDLIHLRAIS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSK 163
++ K AEKEGL F+ETSA+E+ NVE AF T++TE+Y IV++
Sbjct: 137 EDEGKALAEKEGLFFLETSAMEAINVEEAFQTIITEVYGIVNR 179
>gi|297790909|ref|XP_002863339.1| hypothetical protein ARALYDRAFT_494220 [Arabidopsis lyrata subsp.
lyrata]
gi|297309174|gb|EFH39598.1| hypothetical protein ARALYDRAFT_494220 [Arabidopsis lyrata subsp.
lyrata]
Length = 221
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 153/205 (74%), Gaps = 2/205 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LLARFARDEF +SK+TIGVEFQT+ + I+ K +KAQIWDTAGQER+RA
Sbjct: 19 LIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQIWDTAGQERFRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA+LVYDI++RQ+F ++ RWL EL H+D N++ +LVGNKSDL+ LR V
Sbjct: 79 VTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTILVGNKSDLKDLREVS 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T + K AE +GL FMETSAL+S+NV AF TV+ EIY I+S+K +++ E +SL
Sbjct: 139 TAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMSSQ-ELNKQDPASL 197
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+V+P ++ CC+S
Sbjct: 198 SNGKKVVIPSDGQGESKKG-GCCSS 221
>gi|238007236|gb|ACR34653.1| unknown [Zea mays]
Length = 217
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 115/164 (70%), Positives = 137/164 (83%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+ FSLDSK+TIGVEF TK+L I K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQIDGKTIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAV A+LVYDITKRQSFDNV RWL ELR HAD +I+IM+VGNKSDL LRA+
Sbjct: 77 ITSAYYRGAVAALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMVGNKSDLIHLRAIS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKK 164
++ K AEKEGL F+ET A+E+ NVE AF T++TE+Y IV++K
Sbjct: 137 EDEGKALAEKEGLFFLETLAMEAINVEEAFQTIITEVYGIVNRK 180
>gi|255727853|ref|XP_002548852.1| GTP-binding protein YPT32/YPT11 [Candida tropicalis MYA-3404]
gi|240133168|gb|EER32724.1| GTP-binding protein YPT32/YPT11 [Candida tropicalis MYA-3404]
Length = 219
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 118/203 (58%), Positives = 152/203 (74%), Gaps = 3/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF RDEF+L+S++TIGVEF T+TL I K VKAQIWDTAGQERYRA
Sbjct: 20 LIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI K +S+++V+RWL+EL+ HAD NI+I LVGNKSDL+ LRAVP
Sbjct: 80 ITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIVIELVGNKSDLDHLRAVP 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK FA + L F E SAL S NV+L+F +L IY ++SK L N +S +S
Sbjct: 140 TDEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLENNADSNKQSTSG- 198
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
T + P + ++ + + NCC
Sbjct: 199 --PTISLTPAPKEKNSKSNSNCC 219
>gi|126138088|ref|XP_001385567.1| hypothetical protein PICST_68134 [Scheffersomyces stipitis CBS
6054]
gi|126092845|gb|ABN67538.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 220
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 152/205 (74%), Gaps = 6/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF RDEF+L+S++TIGVEF T+TL I K VKAQIWDTAGQERYRA
Sbjct: 20 LIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI K +++++V+RWL+EL+ HAD NI+I LVGNKSDL+ LRAVP
Sbjct: 80 ITSAYYRGAVGALIVYDIAKTETYESVSRWLKELKEHADANIVIELVGNKSDLDHLRAVP 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+A+ FA + L F E SAL S NV+L+F +L IY ++SK L ND GGS+
Sbjct: 140 TEEARNFANENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTND----GGSNKP 195
Query: 181 LKA--TNIVVPGQEPESGRRSYNCC 203
T + P + + + + NCC
Sbjct: 196 TTGGPTISLTPAPQEKRSKNNSNCC 220
>gi|388497686|gb|AFK36909.1| unknown [Lotus japonicus]
Length = 217
Score = 242 bits (617), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 120/205 (58%), Positives = 155/205 (75%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EF+L+SK+TIGVEF T+TL + K +K+QIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKSQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGA+GA+LVYD+T+ +F+NV RWL+ELR H D NI++MLVGNKSDL L AV
Sbjct: 78 ITSAYYRGALGALLVYDVTRHATFENVDRWLKELRNHTDSNIVVMLVGNKSDLRHLVAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED K + EKE L F+ETSALE++NVE AF VLT+IY +VSKKA+ +E+G +S
Sbjct: 138 TEDGKSYTEKESLYFIETSALEASNVENAFAEVLTQIYNVVSKKAVEG---AENGTASVP 194
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I + + S + CC++
Sbjct: 195 AKGEKIDL--KNDVSALKRVGCCST 217
>gi|3024506|sp|Q40523.1|RB11A_TOBAC RecName: Full=Ras-related protein Rab11A
gi|623582|gb|AAA74115.1| Nt-Rab11a [Nicotiana tabacum]
Length = 216
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 114/164 (69%), Positives = 136/164 (82%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF L+SK+TIGVEF T+TL + K VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+L YDITKRQ+FDNV RWL ELR H D NI+I+L GNKSDL+ LRAV
Sbjct: 77 ITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVIILAGNKSDLKHLRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKK 164
+D + +KEGL F+ETSALE+ NV+ AF T+LT+IY I+SKK
Sbjct: 137 EQDDQALVKKEGLSFLETSALEALNVDKAFQTILTDIYHIISKK 180
>gi|414881073|tpg|DAA58204.1| TPA: ras protein Rab11B [Zea mays]
Length = 220
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 119/206 (57%), Positives = 150/206 (72%), Gaps = 4/206 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RFARDEFSL++++TIGVEF TKT+ + K VKAQIWDTAGQERYRA
Sbjct: 19 LIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDDKLVKAQIWDTAGQERYRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYD+++R +FDN RWL ELR H D NI++MLVGNK+DL LRAV
Sbjct: 79 ITSAYYRGAVGALVVYDVSRRTTFDNAERWLRELRDHTDANIVVMLVGNKADLRHLRAVS 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
EDA FAE+ G METSAL++TNVE AF VL +IY +VS+ AL D+ +
Sbjct: 139 PEDAAAFAERHGTFSMETSALDATNVERAFAEVLRQIYHVVSRNALDIGDDPAAPPRGKT 198
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
+ V ++ S + CC+S+
Sbjct: 199 ID----VSAAKDEVSPVNAGGCCSSA 220
>gi|168040993|ref|XP_001772977.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162675710|gb|EDQ62202.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 121/208 (58%), Positives = 155/208 (74%), Gaps = 14/208 (6%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LL+R+AR+EF+ +SKATIGVEFQT+++ I K +KAQIWDTAGQER+RA
Sbjct: 17 LIGDSAVGKSNLLSRYARNEFNSNSKATIGVEFQTQSMEIDGKELKAQIWDTAGQERFRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA++VYDIT+R +F+NV+RW +EL+ H+D N+++MLVGNKSDL +R V
Sbjct: 77 VTSAYYRGAVGALIVYDITRRGTFENVSRWFDELKVHSDANVVVMLVGNKSDLAHIREVT 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+A AEK + FMETSALE+ NV AF TVL EI++IVSKKALTA+
Sbjct: 137 AEEATALAEKNTMYFMETSALEAVNVVEAFQTVLKEIHKIVSKKALTADPN--------- 187
Query: 181 LKATNIVVPGQE----PESGRRSYNCCT 204
K +V GQ ++ R+ CC+
Sbjct: 188 -KGNTVVASGQRLAGSDDTTPRTTACCS 214
>gi|401402024|ref|XP_003881151.1| unnamed protein product [Neospora caninum Liverpool]
gi|325115563|emb|CBZ51118.1| unnamed protein product [Neospora caninum Liverpool]
Length = 201
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 117/173 (67%), Positives = 143/173 (82%), Gaps = 1/173 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHH-KNVKAQIWDTAGQERYR 59
LIGDS VGKS +L+RF RDEF+L+SK+TIGVEF TK++ + K +KAQIWDTAGQERYR
Sbjct: 16 LIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQIWDTAGQERYR 75
Query: 60 AVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAV 119
A+TSAYYRGAVGA+LVYDITKRQSF+NV RWL+ELR HAD NI+I+LVGNKSDL+ LRAV
Sbjct: 76 AITSAYYRGAVGALLVYDITKRQSFENVERWLKELRDHADPNIVILLVGNKSDLKHLRAV 135
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDES 172
E+A +FA +E L F+ETSAL++TNVE AF +L EIY + KK + N +S
Sbjct: 136 SVEEATKFANREHLAFIETSALDATNVEQAFHQILAEIYLLRQKKQIEDNPQS 188
>gi|15238115|ref|NP_199563.1| RAB GTPase homolog A5A [Arabidopsis thaliana]
gi|75333810|sp|Q9FGK5.1|RAA5A_ARATH RecName: Full=Ras-related protein RABA5a; Short=AtRABA5a
gi|9758780|dbj|BAB09078.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|28466933|gb|AAO44075.1| At5g47520 [Arabidopsis thaliana]
gi|62321645|dbj|BAD95258.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|110743839|dbj|BAE99754.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|332008145|gb|AED95528.1| RAB GTPase homolog A5A [Arabidopsis thaliana]
Length = 221
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 154/205 (75%), Gaps = 2/205 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LLARFARDEF +SK+TIGVEFQT+ + I+ K +KAQIWDTAGQER+RA
Sbjct: 19 LIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQIWDTAGQERFRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA+LVYDI++RQ+F ++ RWL EL H+D N++ +LVGNKSDL+ LR V
Sbjct: 79 VTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTILVGNKSDLKDLREVS 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T + K AE +GL FMETSAL+S+NV AF TV+ EIY I+S+K +++ E +SL
Sbjct: 139 TAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMSSQ-ELNKQDPASL 197
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+V+P + + + CC+S
Sbjct: 198 SNGKKVVIP-SDGQGEFKKGGCCSS 221
>gi|224086488|ref|XP_002307897.1| predicted protein [Populus trichocarpa]
gi|222853873|gb|EEE91420.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/208 (57%), Positives = 154/208 (74%), Gaps = 4/208 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LLARFAR+EF SK+TIGVEFQT+ + I+ K +KAQIWDTAGQER+RA
Sbjct: 19 LIGDSAVGKSNLLARFARNEFYPSSKSTIGVEFQTQKMDINGKEIKAQIWDTAGQERFRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA+LVYDI++RQ+FD++ +WL EL H+D N++ +LVGNKSDL+ R V
Sbjct: 79 VTSAYYRGAVGALLVYDISRRQTFDSIGKWLNELHTHSDMNVVTILVGNKSDLKDAREVS 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T + K AE +GL FMETSAL+S+NV AF TV+ EIY I+S+K + + E G+ L
Sbjct: 139 TAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILSRKVMMSQ-ELNKPGAPEL 197
Query: 181 LKATNIVVPG---QEPESGRRSYNCCTS 205
+V+ G QE +G + CC+S
Sbjct: 198 GNGKTVVLKGDGDQEGNAGTKKGWCCSS 225
>gi|168056370|ref|XP_001780193.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162668343|gb|EDQ54952.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/208 (56%), Positives = 159/208 (76%), Gaps = 12/208 (5%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LL+R+AR+EF+L+SKATIGVEFQT+++ I K +KAQIWDTAGQER+RA
Sbjct: 17 LIGDSAVGKSNLLSRYARNEFNLNSKATIGVEFQTQSMEIDGKEIKAQIWDTAGQERFRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA++VYDI+++ +FDNV RWL+ELR H+D ++++MLVGNK DL+ +R V
Sbjct: 77 VTSAYYRGAVGALIVYDISRKGTFDNVGRWLDELRVHSDASVVVMLVGNKCDLDNIREVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESG---GS 177
E+A A+ E + F+ETSA+++TNV AF +V+ EIYR+VSKK LT++ +S GS
Sbjct: 137 QEEATLLAQNEKMSFIETSAMDATNVTNAFQSVVKEIYRVVSKKPLTSSVSMKSNTVLGS 196
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCCTS 205
S L + + P + NCC++
Sbjct: 197 SQRLAGIDDIQPKR---------NCCST 215
>gi|303740|dbj|BAA02111.1| GTP-binding protein [Pisum sativum]
Length = 215
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 123/206 (59%), Positives = 157/206 (76%), Gaps = 6/206 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ I K VKAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRILDKLVKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD T+ +F+NV RWL+ELR H D ++IMLVGNK+DL L AV
Sbjct: 76 ITSAYYRGAVGALLVYDSTRHVTFENVERWLKELRDHTDAYVVIMLVGNKTDLRHLCAVS 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+A FAEKE + FMETSALES NV+ AF+ VLT+IY +VSK+AL + GS+S+
Sbjct: 136 TEEATAFAEKENIYFMETSALESMNVDSAFVEVLTQIYNVVSKRAL-----EKENGSASV 190
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
K I + G++ S + CC+++
Sbjct: 191 PKGETINI-GRDDVSEVKKSTCCSTA 215
>gi|354545830|emb|CCE42558.1| hypothetical protein CPAR2_202010 [Candida parapsilosis]
Length = 221
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 121/205 (59%), Positives = 154/205 (75%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF RDEF+L+S++TIGVEF T+TL I K VKAQIWDTAGQERYRA
Sbjct: 20 LIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI K +S+++V+RWL+EL+ HAD NI+I LVGNKSDL+ LRAVP
Sbjct: 80 ITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIVIELVGNKSDLDHLRAVP 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+A+ FA + L F E SAL S NV+L+F +L IY ++SK L D +E GG +
Sbjct: 140 TEEARNFALENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQL---DTNEQGGLKAA 196
Query: 181 LKATNI-VVPG-QEPESGRRSYNCC 203
I + P +E +S + + NCC
Sbjct: 197 SNGPTISLTPAPKEKKSSKNNSNCC 221
>gi|448525743|ref|XP_003869190.1| Ypt31 protein [Candida orthopsilosis Co 90-125]
gi|380353543|emb|CCG23053.1| Ypt31 protein [Candida orthopsilosis]
Length = 221
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 121/205 (59%), Positives = 154/205 (75%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF RDEF+L+S++TIGVEF T+TL I K VKAQIWDTAGQERYRA
Sbjct: 20 LIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI K +S+++V+RWL+EL+ HAD NI+I LVGNKSDL+ LRAVP
Sbjct: 80 ITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIVIELVGNKSDLDHLRAVP 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+A+ FA + L F E SAL S NV+L+F +L IY ++SK L D +E GG +
Sbjct: 140 TEEARNFALENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQL---DTNEQGGLKAP 196
Query: 181 LKATNI-VVPG-QEPESGRRSYNCC 203
I + P +E +S + + NCC
Sbjct: 197 SNGPTISLTPAPKEKKSSKNNSNCC 221
>gi|241959082|ref|XP_002422260.1| GTP-binding protein, putative; Rab GTPase, putative [Candida
dubliniensis CD36]
gi|223645605|emb|CAX40264.1| GTP-binding protein, putative [Candida dubliniensis CD36]
gi|238880161|gb|EEQ43799.1| GTP-binding protein YPT31/YPT8 [Candida albicans WO-1]
Length = 219
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 118/203 (58%), Positives = 150/203 (73%), Gaps = 3/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF RDEF+L+S++TIGVEF T+TL I K VKAQIWDTAGQERYRA
Sbjct: 20 LIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI K +S+++V+RWL+EL+ HAD NIII LVGNKSDL+ LRAVP
Sbjct: 80 ITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIIIELVGNKSDLDHLRAVP 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK FA + L F E SAL S NV+L+F +L IY ++SK L ND ++ +
Sbjct: 140 TEEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLENNDSKQTNTAGG- 198
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
T + P + + + + CC
Sbjct: 199 --PTISLTPAPQEKKNKNNGGCC 219
>gi|115473561|ref|NP_001060379.1| Os07g0634200 [Oryza sativa Japonica Group]
gi|22093831|dbj|BAC07118.1| putative Rab GTP-binding protein Rab11a [Oryza sativa Japonica
Group]
gi|113611915|dbj|BAF22293.1| Os07g0634200 [Oryza sativa Japonica Group]
gi|215734858|dbj|BAG95580.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218200085|gb|EEC82512.1| hypothetical protein OsI_26999 [Oryza sativa Indica Group]
Length = 220
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 154/205 (75%), Gaps = 3/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
L+GDS+VGKS LLARFAR+EF +SK+TIGVEFQT+ LVI K +KAQIWDTAGQER+RA
Sbjct: 19 LLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIKAQIWDTAGQERFRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA+LVYDI++RQ+FD+V RWL EL H+D N++ +LVGNK+DL+ R V
Sbjct: 79 VTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNVVTILVGNKTDLKHAREVS 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T + K AE +GL FMETSAL+S+NV AF TV+ EIY I+S+K + ++ S S S
Sbjct: 139 TAEGKALAESQGLFFMETSALDSSNVAEAFQTVVKEIYGILSRKVFQSQEQKRSEQSLSN 198
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K ++ EP SG R CC+S
Sbjct: 199 GKPV-MLSDSNEPTSGGRW--CCSS 220
>gi|237838191|ref|XP_002368393.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|31745716|gb|AAP57202.1| Rab11 [Toxoplasma gondii]
gi|211966057|gb|EEB01253.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|221484334|gb|EEE22630.1| rab11, putative [Toxoplasma gondii GT1]
Length = 219
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/173 (67%), Positives = 143/173 (82%), Gaps = 1/173 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHH-KNVKAQIWDTAGQERYR 59
LIGDS VGKS +L+RF RDEF+L+SK+TIGVEF TK++ + K +KAQIWDTAGQERYR
Sbjct: 16 LIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQIWDTAGQERYR 75
Query: 60 AVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAV 119
A+TSAYYRGAVGA+LVYDITKRQSF+NV RWL+ELR HAD NI+I+LVGNKSDL+ LRAV
Sbjct: 76 AITSAYYRGAVGALLVYDITKRQSFENVERWLKELRDHADPNIVILLVGNKSDLKHLRAV 135
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDES 172
E+A +FA +E L F+ETSAL++TNVE AF +L EIY + KK + N +S
Sbjct: 136 SVEEATKFANREHLAFIETSALDATNVEQAFHQILAEIYLLRQKKQIEDNPQS 188
>gi|42543204|pdb|1OIW|A Chain A, X-ray Structure Of The Small G Protein Rab11a In Complex
With Gtpgammas
gi|60593433|pdb|1OIX|A Chain A, X-Ray Structure Of The Small G Protein Rab11a In Complex
With Gdp And Pi
Length = 191
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 113/158 (71%), Positives = 136/158 (86%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAG ERYRA
Sbjct: 34 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGLERYRA 93
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 94 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 153
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIY 158
T++A+ FAEK GL F+ETSAL+STNVE AF T+LTEIY
Sbjct: 154 TDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 191
>gi|328717635|ref|XP_003246264.1| PREDICTED: ras-related protein Rab-11A-like isoform 2
[Acyrthosiphon pisum]
Length = 223
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/173 (66%), Positives = 141/173 (81%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LLARF R+EF+L+SK+TIGVEF T+++ ++ K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLARFTRNEFNLESKSTIGVEFATRSIKVNKKIIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K+ ++ NV RWL ELR HAD+NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKQLTYQNVERWLSELRDHADQNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESE 173
++A FAE L F+ETSAL+STNVE AF +LTEI+R VS + + + D E
Sbjct: 136 ADEATAFAEANNLSFIETSALDSTNVETAFENILTEIHRKVSARQMDSMDGDE 188
>gi|340380586|ref|XP_003388803.1| PREDICTED: ras-related protein Rab-11B-like [Amphimedon
queenslandica]
Length = 219
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 124/203 (61%), Positives = 152/203 (74%), Gaps = 3/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKVDGKVVKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI K +++NV RWL+EL+ HAD NI+IML GNK DL LRAV
Sbjct: 76 ITSAYYRGAVGALVVYDIAKHMTYENVERWLKELKDHADTNIVIMLAGNKCDLRHLRAVS 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK+FAE+ L F+ETSAL+STNVE AF +LTEIY IV +KA A+ GGS S
Sbjct: 136 TEEAKKFAEQHSLSFIETSALDSTNVEAAFQNILTEIYNIVIQKA-PADGGQGGGGSVSE 194
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
K I + Q+ E CC
Sbjct: 195 TKV--IKIDDQKDEKSGSKMKCC 215
>gi|110430656|gb|ABG73446.1| Ras-related protein Rab11B [Oryza brachyantha]
Length = 248
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/214 (56%), Positives = 157/214 (73%), Gaps = 9/214 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
++GDSAVGK+QLL RF +DEF LDSK+TIGVEFQT+TL +H K VKAQIWDTAGQERYRA
Sbjct: 35 VVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLTLHRKRVKAQIWDTAGQERYRA 94
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLE-TLRAV 119
VTSAYYRGA+GAM+VYDIT+R++F+NVARW+EELR HAD + ++ L+GNK+D+ + R V
Sbjct: 95 VTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVVALIGNKADMPASRREV 154
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL-------TANDES 172
++A FAE++GL F E SAL NVE AFLT+L EI+ +VS++AL N +
Sbjct: 155 AADEAARFAEEQGLFFSEASALSGDNVERAFLTLLEEIFAVVSRRALELDEARRMRNGGA 214
Query: 173 ESGGSSSLLKATNIVVPG-QEPESGRRSYNCCTS 205
+GG LK T + V E + ++S C S
Sbjct: 215 GAGGEVLSLKGTTLDVGSIMETSAMKKSSQCSCS 248
>gi|375332073|gb|AFA52576.1| Rab11 family GTPase [Vaucheria litorea]
Length = 272
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 110/169 (65%), Positives = 140/169 (82%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+++SK+TIGVEF TK++ +K +KAQIWDTAGQERYRA
Sbjct: 70 LIGDSGVGKSNLLSRFTRNEFNMESKSTIGVEFATKSIQTENKIIKAQIWDTAGQERYRA 129
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITK +F+N RWL+ELR HA+ NI++MLVGNK DL LR V
Sbjct: 130 ITSAYYRGAVGALLVYDITKHSTFENAERWLKELRDHAESNIVVMLVGNKCDLRHLRTVS 189
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAN 169
E+AKEFAEK L F+ETSAL+S+ V+ AF +LTEIY++++KK ++ N
Sbjct: 190 VEEAKEFAEKNSLAFIETSALDSSGVDTAFQQILTEIYKLMNKKQMSGN 238
>gi|299473109|emb|CBN78685.1| Rab11A, RAB family GTPase [Ectocarpus siliculosus]
Length = 219
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 116/206 (56%), Positives = 152/206 (73%), Gaps = 4/206 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF TK++ K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K +F+NV RWL+ELR HA+ NI++ML+GNKSDL LR V
Sbjct: 76 ITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLIGNKSDLRHLRTVT 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+A EFA+K L F+ETSAL+++ V+ AF +LTEIYR++S+K + AN + L
Sbjct: 136 HEEAMEFAKKHNLAFLETSALDASGVDSAFQRILTEIYRLMSRKTIAAN----TATGPDL 191
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
+ I + ++ RS + C S
Sbjct: 192 SRGETIALSSARDDASNRSKSSCAGS 217
>gi|388583882|gb|EIM24183.1| ras-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 222
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 157/216 (72%), Gaps = 22/216 (10%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EF++DSK+TIGVEF T++L + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSSVLSRFTRNEFNMDSKSTIGVEFATRSLEVDQKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K+ SF NV RWL+EL+ HAD NI+IMLVGNKSDL+ LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDISKQSSFANVERWLKELKDHADSNIVIMLVGNKSDLKHLRAVP 135
Query: 121 TEDAKEFAEKEG-----------LCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAN 169
T +A+ + E++ + F+ETSAL+STNVE AF +LT+IY++V+ KAL
Sbjct: 136 TAEAQSYTEEKSKLEDGTESSNPIRFIETSALDSTNVEAAFQNILTDIYQLVATKAL--- 192
Query: 170 DESESGGSSSLLKATNIVVPGQEP--ESGRRSYNCC 203
GG S +K TN +P +S + CC
Sbjct: 193 ----EGGDS--IKPTNGETINVQPTSDSDNKKAGCC 222
>gi|357134125|ref|XP_003568668.1| PREDICTED: ras-related protein RGP2-like isoform 1 [Brachypodium
distachyon]
gi|357134127|ref|XP_003568669.1| PREDICTED: ras-related protein RGP2-like isoform 2 [Brachypodium
distachyon]
Length = 217
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/162 (69%), Positives = 135/162 (83%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+ FSLDSK+TIGVEF TK+L + K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITKRQSF+NV RWL ELR HAD +I+IM+VGNKSDL LR+V
Sbjct: 77 ITSAYYRGAVGALLVYDITKRQSFENVNRWLRELRDHADSSIVIMMVGNKSDLTHLRSVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVS 162
+ K AEKEGL F+ETSA+E+ NVE AF T++ E+Y IV+
Sbjct: 137 EDQGKALAEKEGLFFLETSAMEAVNVEEAFQTIIAEVYGIVN 178
>gi|78714212|gb|ABB51088.1| Small GTPase Rab11 [Gracilaria lemaneiformis]
Length = 221
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 121/201 (60%), Positives = 152/201 (75%), Gaps = 8/201 (3%)
Query: 5 SAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSA 64
S + KS LL+RF R+EFSL+SK+TIGVEF T+++ K +KAQIWDTAGQERYRA+TSA
Sbjct: 27 SFLSKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQIWDTAGQERYRAITSA 86
Query: 65 YYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDA 124
YYRGAVGA+LVYDITK+ SFDNV RWL+EL+ HAD NI+IMLVGNKSDL+ L+AV T+DA
Sbjct: 87 YYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLVGNKSDLQHLKAVTTDDA 146
Query: 125 KEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSLLK-A 183
FAE GL F+ETSAL+++NVE AF ++L+EIYR+ SKKAL E G +S+ A
Sbjct: 147 SAFAESNGLSFIETSALDNSNVEEAFRSILSEIYRLGSKKAL------EKGSTSNFAPNA 200
Query: 184 TNIVVPGQEPESGR-RSYNCC 203
T +V + G+ CC
Sbjct: 201 TQTIVINPPADEGKTEKAKCC 221
>gi|356535256|ref|XP_003536164.1| PREDICTED: ras-related protein RABA5a-like [Glycine max]
Length = 223
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 119/206 (57%), Positives = 154/206 (74%), Gaps = 2/206 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LLARFARDEF +SK+TIGVEFQT+ + I+ K VKAQIWDTAGQER+RA
Sbjct: 19 LIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA+LVYDI++RQ+FD++ RWL EL H+D N++ +LVGNKSDL+ R V
Sbjct: 79 VTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVA 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T + K AE +GL FMETSAL+S+NV AF TV+ EIY I+S+K + + E + +
Sbjct: 139 TAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMISQ-ELNKQDVTRI 197
Query: 181 LKATNIVVPGQ-EPESGRRSYNCCTS 205
+V+ G+ + E+ + CC+S
Sbjct: 198 ENGKTVVLQGEGDVEAAQSKKGCCSS 223
>gi|212723946|ref|NP_001131951.1| uncharacterized protein LOC100193344 [Zea mays]
gi|194693006|gb|ACF80587.1| unknown [Zea mays]
gi|195620812|gb|ACG32236.1| ras-related protein ARA-4 [Zea mays]
gi|414887766|tpg|DAA63780.1| TPA: Ras protein ARA-4 isoform 1 [Zea mays]
gi|414887767|tpg|DAA63781.1| TPA: Ras protein ARA-4 isoform 2 [Zea mays]
Length = 222
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 118/205 (57%), Positives = 154/205 (75%), Gaps = 1/205 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS+VGKS LLARFAR+EF +SK+TIGVEFQT+ LVI K +KAQIWDTAGQER+RA
Sbjct: 19 LIGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIKAQIWDTAGQERFRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA+LVYDI++RQ+FD+V RWL EL H+D N++ +LVGNK+DL+ R V
Sbjct: 79 VTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHNHSDMNVVTILVGNKTDLKHAREVS 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T + + AE +GL FMETSAL+S+NV AF TV+ EIY I+S+K + ++ +S SL
Sbjct: 139 TAEGQALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYSILSRKVFQSLEQKKS-ELQSL 197
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+V+ G+ ++ CC+S
Sbjct: 198 SSGKAVVLQGEANQTSSGGRWCCSS 222
>gi|50980848|gb|AAT91270.1| putative Rab GTPase [Paxillus involutus]
gi|50980850|gb|AAT91271.1| GTPase [Paxillus involutus]
gi|50980852|gb|AAT91272.1| GTPase [Paxillus involutus]
Length = 161
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 111/159 (69%), Positives = 137/159 (86%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 3 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSINVDSKTVKAQIWDTAGQERYRA 62
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K ++ NV RWL+ELR HAD NI+IMLVGNKSDL+ LRAVP
Sbjct: 63 ITSAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDLKHLRAVP 122
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYR 159
TE+AK F+ + L F+ETSAL+++NVE AF T+LT++YR
Sbjct: 123 TEEAKNFSAENELSFIETSALDASNVESAFQTILTDVYR 161
>gi|5714658|gb|AAD48018.1| Rab GTP-binding protein Rab11a [Gossypium hirsutum]
Length = 224
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 122/213 (57%), Positives = 155/213 (72%), Gaps = 15/213 (7%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
L+GDSAVGKS LLARFAR+EF +SK+TIGVEFQT+ L I+ K VKAQIWDTAGQER+RA
Sbjct: 19 LVGDSAVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLDINGKEVKAQIWDTAGQERFRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA+LVYDI++RQ+FD++ RWL EL+ H+D N++ +LVGNKSDL R V
Sbjct: 79 VTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELQTHSDMNVVTILVGNKSDLRDAREVS 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T + K AE +GL FMETSAL+S+NV AF TV+ EIY I+S+K + ++ E +
Sbjct: 139 TAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILSRKVMMSH---ELKKQDAP 195
Query: 181 LKATNIVVPGQE--------PESGRRSYNCCTS 205
L +V+ G E P+SG CC+S
Sbjct: 196 LDGKTVVLQGDENQERATESPKSG----GCCSS 224
>gi|89257444|gb|ABD64936.1| Ras-related GTP-binding protein, putative [Brassica oleracea]
Length = 219
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 116/203 (57%), Positives = 152/203 (74%), Gaps = 2/203 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LLARFARDEF +SK+TIGVEFQT+ + I+ K +KAQIWDTAGQER+RA
Sbjct: 19 LIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIDINGKEIKAQIWDTAGQERFRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA+LVYDI+++Q+F ++ RWL EL H+D N++ +LVGNKSDL+ +R VP
Sbjct: 79 VTSAYYRGAVGALLVYDISRKQTFHSIGRWLNELHTHSDMNVVTILVGNKSDLKDIREVP 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T + K AE +GL FMETSA +S+NV AF TV+ EIY I+S+K +++ E +SL
Sbjct: 139 TAEGKALAEAQGLFFMETSARDSSNVAAAFETVVKEIYNILSRKVMSSQ-ELNKQDPASL 197
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+V+P + ++ CC
Sbjct: 198 SNGKKVVIPSEAQGEAKKG-GCC 219
>gi|156102877|ref|XP_001617131.1| small GTPase rab11 [Plasmodium vivax Sal-1]
gi|148806005|gb|EDL47404.1| small GTPase rab11, putative [Plasmodium vivax]
Length = 230
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 115/175 (65%), Positives = 146/175 (83%), Gaps = 1/175 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVI-HHKNVKAQIWDTAGQERYR 59
LIGDS VGKS LL+RF RDEF+L+SK+TIGVEF TK++ + ++K +KAQIWDTAGQERYR
Sbjct: 16 LIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDTAGQERYR 75
Query: 60 AVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAV 119
A+TSAYYRGAVGA+LVYDITK+ SF+N+ +WL+ELR +AD NI+I+LVGNKSDL+ LR +
Sbjct: 76 AITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGNKSDLKHLRVI 135
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESES 174
+A +FA+KE L F+ETSALE+TNVELAF +L EIY + KK T N++S S
Sbjct: 136 NDNEATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQGTKNEDSMS 190
>gi|50980854|gb|AAT91273.1| GTPase [Paxillus involutus]
gi|50980856|gb|AAT91274.1| GTPase [Paxillus involutus]
Length = 161
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 111/159 (69%), Positives = 137/159 (86%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 3 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSISVDGKTVKAQIWDTAGQERYRA 62
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K ++ NV RWL+ELR HAD NI+IMLVGNKSDL+ LRAVP
Sbjct: 63 ITSAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDLKHLRAVP 122
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYR 159
TE+AK F+ + L F+ETSAL+++NVE AF T+LT++YR
Sbjct: 123 TEEAKNFSTENELSFIETSALDASNVESAFQTILTDVYR 161
>gi|224005202|ref|XP_002296252.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
gi|209586284|gb|ACI64969.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
Length = 215
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 116/206 (56%), Positives = 155/206 (75%), Gaps = 7/206 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF TK++ K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K +F+NV RWL+ELR HA+ NI++MLVGNKSDL LRAV
Sbjct: 77 ITSAYYRGAVGALLVYDISKHGTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLRAVE 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A F+E+ L F+ETSAL+++ V+ AF +LTEIYR++S++ + A D G ++
Sbjct: 137 TDEAMAFSEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRRNMAAED----GANAPQ 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
L + + E + R NCC ++
Sbjct: 193 LSSGQTISLNAENKPRR---NCCNNA 215
>gi|1370156|emb|CAA98184.1| RAB11H [Lotus japonicus]
Length = 218
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 122/206 (59%), Positives = 153/206 (74%), Gaps = 6/206 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EFSL+SK+TIGVEF T+++ + K VKAQ+WDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQVWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+++ +F+NV RWL+ELR H D NI++MLVGNK+DL LRAV
Sbjct: 78 ITSAYYRGAVGALLVYDVSRHVTFENVERWLKELRDHTDTNIVVMLVGNKADLRHLRAVS 137
Query: 121 TEDAKEFAEKEGL-CFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSS 179
TED+ F E FMETSALES NVE AF VLT+IYR+VSKKAL D+ ++
Sbjct: 138 TEDSSGFLLNERTHFFMETSALESLNVENAFTEVLTQIYRVVSKKALEIGDD-----PTA 192
Query: 180 LLKATNIVVPGQEPESGRRSYNCCTS 205
L K I V ++ S + CC+S
Sbjct: 193 LPKGQTINVGSRDDVSPVKKSGCCSS 218
>gi|221061061|ref|XP_002262100.1| small GTPase Rab11 [Plasmodium knowlesi strain H]
gi|193811250|emb|CAQ41978.1| small GTPase Rab11, putative [Plasmodium knowlesi strain H]
Length = 216
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 115/175 (65%), Positives = 146/175 (83%), Gaps = 1/175 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVI-HHKNVKAQIWDTAGQERYR 59
LIGDS VGKS LL+RF RDEF+L+SK+TIGVEF TK++ + ++K +KAQIWDTAGQERYR
Sbjct: 16 LIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDTAGQERYR 75
Query: 60 AVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAV 119
A+TSAYYRGAVGA+LVYDITK+ SF+N+ +WL+ELR +AD NI+I+LVGNKSDL+ LR +
Sbjct: 76 AITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGNKSDLKHLRVI 135
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESES 174
+A +FA+KE L F+ETSALE+TNVELAF +L EIY + KK T N++S S
Sbjct: 136 NDNEATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQGTKNEDSMS 190
>gi|126645710|ref|XP_001388049.1| Rab11 [Cryptosporidium parvum Iowa II]
gi|126117137|gb|EAZ51237.1| Rab11, putative [Cryptosporidium parvum Iowa II]
Length = 220
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 113/169 (66%), Positives = 140/169 (82%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF RDEF+L+SK+TIGVEF TK+++ K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIITEGKVIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+KR SF+NV RWL+ELR HAD NI+++LVGNKSDL LR V
Sbjct: 76 ITSAYYRGAVGALLVYDISKRSSFENVERWLKELRDHADPNIVVLLVGNKSDLRNLRTVT 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAN 169
E+A F+E+EG+ ME SAL S+NV+ AF +L+EIY + S++ LTAN
Sbjct: 136 QEEACAFSEREGMACMEASALNSSNVDEAFHRILSEIYTLRSERQLTAN 184
>gi|560504|emb|CAA82710.1| guanine nucleotide regulatory protein [Vicia faba]
gi|1098296|prf||2115367D small GTP-binding protein
Length = 223
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 118/205 (57%), Positives = 150/205 (73%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LLARFARDEF +SK+TIGVEFQT+ + I+ K VKAQIWDTAGQER+RA
Sbjct: 19 LIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEVKAQIWDTAGQERFRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA+LVYDI++RQ+FD++ RWL EL H+D N++ +LVGNKSDL+ R VP
Sbjct: 79 VTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVP 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T + K AE +GL FMETSAL+S+NV AF TV+ EIY I+S+K + + + + +
Sbjct: 139 TPEGKALAEAQGLFFMETSALDSSNVVSAFQTVVKEIYNILSRKVMMSQELKKQDTPWTE 198
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
T ++ G CC+S
Sbjct: 199 NGKTVVLQEGDREVEVESKKGCCSS 223
>gi|195650695|gb|ACG44815.1| ras-related protein Rab11B [Zea mays]
Length = 220
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 118/206 (57%), Positives = 149/206 (72%), Gaps = 4/206 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RFARDEFSL++++TIGVEF TKT+ + K VKAQIWDTAGQERYRA
Sbjct: 19 LIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDDKLVKAQIWDTAGQERYRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYD+++R +FDN RWL E R H D NI++MLVGNK+DL LRAV
Sbjct: 79 ITSAYYRGAVGALVVYDVSRRTTFDNAERWLREPRDHTDANIVVMLVGNKADLRHLRAVS 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
EDA FAE+ G METSAL++TNVE AF VL +IY +VS+ AL D+ +
Sbjct: 139 PEDAAAFAERHGTFSMETSALDATNVERAFAEVLRQIYHVVSRNALDIGDDPAAPPRGKT 198
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
+ V ++ S + CC+S+
Sbjct: 199 ID----VSAAKDEVSPVNAGGCCSSA 220
>gi|432958666|ref|XP_004086097.1| PREDICTED: ras-related protein Rab-11A-like isoform 2 [Oryzias
latipes]
Length = 210
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 113/156 (72%), Positives = 135/156 (86%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTE 156
T++A+ FAEK GL F+ETSAL+STNVE AF T+LTE
Sbjct: 136 TDEARAFAEKNGLSFLETSALDSTNVETAFQTILTE 171
>gi|224131546|ref|XP_002321111.1| predicted protein [Populus trichocarpa]
gi|222861884|gb|EEE99426.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 118/204 (57%), Positives = 154/204 (75%), Gaps = 4/204 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGKS LL+R+AR+EF+L SKATIGVEFQT+++ I K VKAQIWDTAGQER+RA
Sbjct: 17 IIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA++VYDI++R +FD+V RWL+EL+ H+D + +MLVGNK DLE +R V
Sbjct: 77 VTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVAMMLVGNKCDLENIRDVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+AK AE EGL FMETSAL+STNV+ AF V+ EIY VS+K L S++ +
Sbjct: 137 VEEAKCLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKVLN----SDTYKAELS 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCT 204
L +V G + + + ++CC+
Sbjct: 193 LNRVTLVNNGNDSKQAQSYFSCCS 216
>gi|1370160|emb|CAA98186.1| RAB11J [Lotus japonicus]
Length = 223
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 118/211 (55%), Positives = 155/211 (73%), Gaps = 12/211 (5%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LLARFARDEF +SK+TIGVEFQT+ + I+ K +KAQIWDTAGQER+RA
Sbjct: 19 LIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIDINGKEIKAQIWDTAGQERFRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA++VYDI++RQ+FD++ RWL EL H+D N++ +LVGNKSDL+ R V
Sbjct: 79 VTSAYYRGAVGALVVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVT 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESE------S 174
T + K AE +GL FMETSAL+S+NV AF TV+ EIY I+S+K + + + ++
Sbjct: 139 TAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILSRKVMMSQELTKHEVPRIE 198
Query: 175 GGSSSLLKATNIVVPGQEPESGRRSYNCCTS 205
G S +++ N+ GQ + CC+S
Sbjct: 199 NGKSVVIQGENLEADGQSKKG------CCSS 223
>gi|2463536|dbj|BAA22522.1| GTP binding protein [Rattus norvegicus]
Length = 218
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 126/211 (59%), Positives = 155/211 (73%), Gaps = 19/211 (9%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAV- 119
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+I+LVGNKSDL LRAV
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVILLVGNKSDLRHLRAVC 135
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGG 176
P +A+ FAE+ L F+ETSAL+STNVE AF +LTEIYRIVS+K + A+DES
Sbjct: 136 PLTEARAFAERH-LSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGNN 194
Query: 177 SSSLLKATNIVVP----GQEPESGRRSYNCC 203
+I VP GQ+P CC
Sbjct: 195 ------VVDISVPPTTDGQKPN----KLQCC 215
>gi|389586140|dbj|GAB68869.1| small GTPase rab11 [Plasmodium cynomolgi strain B]
Length = 216
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 115/175 (65%), Positives = 146/175 (83%), Gaps = 1/175 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVI-HHKNVKAQIWDTAGQERYR 59
LIGDS VGKS LL+RF RDEF+L+SK+TIGVEF TK++ + ++K +KAQIWDTAGQERYR
Sbjct: 16 LIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDTAGQERYR 75
Query: 60 AVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAV 119
A+TSAYYRGAVGA+LVYDITK+ SF+N+ +WL+ELR +AD NI+I+LVGNKSDL+ LR +
Sbjct: 76 AITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGNKSDLKHLRVI 135
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESES 174
+A +FA+KE L F+ETSALE+TNVELAF +L EIY + KK T N++S S
Sbjct: 136 NDNEATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQGTKNEDSMS 190
>gi|397569796|gb|EJK46971.1| hypothetical protein THAOC_34340 [Thalassiosira oceanica]
Length = 214
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 115/203 (56%), Positives = 152/203 (74%), Gaps = 7/203 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF TK++ K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K +F+NV RWL+ELR HA+ NI++MLVGNKSDL LRAV
Sbjct: 77 ITSAYYRGAVGALLVYDISKHSTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLRAVE 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A F+E+ L F+ETSAL+++ V+ +F +LTEIYR++S++ + A E GG+
Sbjct: 137 TDEAMAFSEQHNLAFIETSALDASGVDTSFQRILTEIYRLMSRRNMAA----EEGGNQPQ 192
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
L + + + R NCC
Sbjct: 193 LSTGQTISLNNDNKPRR---NCC 212
>gi|357121819|ref|XP_003562615.1| PREDICTED: ras-related protein RABA5a-like [Brachypodium
distachyon]
Length = 223
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 118/206 (57%), Positives = 150/206 (72%), Gaps = 1/206 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
L+GDS+VGKS LLARFAR+EF +SK+TIGVEFQT+ LVI K +KAQIWDTAGQER+RA
Sbjct: 19 LLGDSSVGKSNLLARFARNEFFPNSKSTIGVEFQTQKLVIDGKEIKAQIWDTAGQERFRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA+LVYDIT+RQ+FD+V RWL EL H+D N++ +L+GNK+DL+ R V
Sbjct: 79 VTSAYYRGAVGALLVYDITRRQTFDSVGRWLNELHTHSDMNVVTILIGNKTDLKHAREVS 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T + K AE +GL FMETSAL+S+NV+ AF TV+ EIY I+S+K ++ S SL
Sbjct: 139 TAEGKALAEAQGLFFMETSALDSSNVKAAFQTVVKEIYSILSRKVFQCQEQKRS-DLQSL 197
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
+V+ P+ C SS
Sbjct: 198 SNGKAVVLQTDAPKEANSGRGWCCSS 223
>gi|115480275|ref|NP_001063731.1| Os09g0527600 [Oryza sativa Japonica Group]
gi|52077324|dbj|BAD46365.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113631964|dbj|BAF25645.1| Os09g0527600 [Oryza sativa Japonica Group]
gi|125564446|gb|EAZ09826.1| hypothetical protein OsI_32116 [Oryza sativa Indica Group]
gi|215767070|dbj|BAG99298.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 239
Score = 238 bits (608), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 120/213 (56%), Positives = 155/213 (72%), Gaps = 8/213 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
++GDSAVGK+QLL RF +DEF LDSK+TIGVEFQT+TL +H K VKAQIWDTAGQERYRA
Sbjct: 27 VVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSLHRKRVKAQIWDTAGQERYRA 86
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLET-LRAV 119
VTSAYYRGA+GAM+VYDIT+R++F+NVARW+EELR HAD + ++ L+GNK+D+ R V
Sbjct: 87 VTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVVALIGNKADMPAGRREV 146
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAN------DESE 173
++A FAE++GL F E SAL NV+ AFLT+L EI+ +VS++AL + D
Sbjct: 147 AADEAARFAEEQGLFFSEASALSGDNVDRAFLTLLEEIFAVVSRRALELDEARRMRDGGA 206
Query: 174 SGGSSSLLKATNIVVPG-QEPESGRRSYNCCTS 205
GG LK T + V E + ++S C S
Sbjct: 207 GGGEVLSLKGTTLDVGSIMETSAMKKSSQCSCS 239
>gi|224065032|ref|XP_002301639.1| predicted protein [Populus trichocarpa]
gi|222843365|gb|EEE80912.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 238 bits (608), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 117/204 (57%), Positives = 153/204 (75%), Gaps = 4/204 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGKS LL+R+AR+EF+L SKATIGVEFQT+++ I K VKAQIWDTAGQER+RA
Sbjct: 17 IIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA++VYDI++R +FD+V RWL+EL+ H+D + +MLVGNK DLE +R V
Sbjct: 77 VTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVAMMLVGNKCDLENIRDVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+ K AE EGL FMETSAL+STNV+ AF V+ EIY VS+K L S++ +
Sbjct: 137 VEEGKSLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKVLN----SDTYKAELS 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCT 204
L +V G + + + ++CC+
Sbjct: 193 LNRVTLVNNGSDSKQAQGYFSCCS 216
>gi|297828009|ref|XP_002881887.1| hypothetical protein ARALYDRAFT_903694 [Arabidopsis lyrata subsp.
lyrata]
gi|297327726|gb|EFH58146.1| hypothetical protein ARALYDRAFT_903694 [Arabidopsis lyrata subsp.
lyrata]
Length = 213
Score = 238 bits (608), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 117/204 (57%), Positives = 152/204 (74%), Gaps = 7/204 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGKS LL R+AR+EF+ +SKATIGVEFQT+++VI K VKAQIWDTAGQER+RA
Sbjct: 16 IIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMVIDGKEVKAQIWDTAGQERFRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA++VYDIT+ +F+NV RWL+EL H+D + ML+GNK DLE++RAV
Sbjct: 76 VTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCDLESIRAVS 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+ K AE EGL FMETSAL+STNV+ AF V+ EIY +S+K L ++ E
Sbjct: 136 VEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQLNSDSYKEE------ 189
Query: 181 LKATNIVVPGQEPESGRRSYNCCT 204
L + + E E G ++++CC+
Sbjct: 190 LTVNRVSLVKNENE-GTKTFSCCS 212
>gi|116667013|pdb|2D7C|A Chain A, Crystal Structure Of Human Rab11 In Complex With Fip3 Rab-
Binding Domain
gi|116667014|pdb|2D7C|B Chain B, Crystal Structure Of Human Rab11 In Complex With Fip3 Rab-
Binding Domain
Length = 167
Score = 238 bits (608), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 112/158 (70%), Positives = 135/158 (85%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAG ERYRA
Sbjct: 10 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGLERYRA 69
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+I LVGNKSDL LRAVP
Sbjct: 70 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIXLVGNKSDLRHLRAVP 129
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIY 158
T++A+ FAEK GL F+ETSAL+STNVE AF T+LTEIY
Sbjct: 130 TDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 167
>gi|114794171|pdb|2GZD|A Chain A, Crystal Structure Of Rab11 In Complex With Rab11-Fip2
gi|114794172|pdb|2GZD|B Chain B, Crystal Structure Of Rab11 In Complex With Rab11-Fip2
gi|114794175|pdb|2GZH|A Chain A, Crystal Structure Of Rab11 In Complex With Rab11-Family
Interacting Protein 2
Length = 173
Score = 238 bits (608), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 112/158 (70%), Positives = 135/158 (85%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAG ERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGLERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+I LVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIXLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIY 158
T++A+ FAEK GL F+ETSAL+STNVE AF T+LTEIY
Sbjct: 136 TDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 173
>gi|242046428|ref|XP_002461085.1| hypothetical protein SORBIDRAFT_02g040430 [Sorghum bicolor]
gi|241924462|gb|EER97606.1| hypothetical protein SORBIDRAFT_02g040430 [Sorghum bicolor]
Length = 222
Score = 238 bits (608), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 154/205 (75%), Gaps = 1/205 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
L+GDS+VGKS LLARFAR+EF +SK+TIGVEFQT+ LVI K +KAQIWDTAGQER+RA
Sbjct: 19 LLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIKAQIWDTAGQERFRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA+LVYDI++RQ+FD+V RWL EL H+D N++ +LVGNK+DL+ R V
Sbjct: 79 VTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNVVTILVGNKTDLKHAREVS 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T + + AE +GL FMETSAL+S+NV AF TV+ EIY I+S+K + ++ +S SL
Sbjct: 139 TAEGQALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYSILSRKVFQSLEQKKS-ELQSL 197
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+V+ G+ ++ CC+S
Sbjct: 198 SNGKAVVLQGETNQTSSGGRWCCSS 222
>gi|242053931|ref|XP_002456111.1| hypothetical protein SORBIDRAFT_03g030650 [Sorghum bicolor]
gi|241928086|gb|EES01231.1| hypothetical protein SORBIDRAFT_03g030650 [Sorghum bicolor]
Length = 219
Score = 238 bits (608), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 113/166 (68%), Positives = 136/166 (81%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RFARDEFSL++++TIGVEF TKT+ + K VKAQIWDTAGQERYRA
Sbjct: 19 LIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDDKLVKAQIWDTAGQERYRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYD+T+R +FDN RWL ELR H D NI++MLVGNK+DL LRAV
Sbjct: 79 ITSAYYRGAVGALVVYDVTRRITFDNAERWLRELRDHTDANIVVMLVGNKADLRHLRAVT 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL 166
EDA FAE+ G METSAL++TNV+ AF VL +IY +VS+ AL
Sbjct: 139 PEDAAAFAERHGTFSMETSALDATNVDRAFAEVLRQIYHVVSRNAL 184
>gi|1370154|emb|CAA98183.1| RAB11G [Lotus japonicus]
Length = 219
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 119/206 (57%), Positives = 154/206 (74%), Gaps = 5/206 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGKS LL+R+AR+EF++ SKATIGVEFQT++L I K VKAQIWDTAGQER+RA
Sbjct: 18 IIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQSLEIDSKEVKAQIWDTAGQERFRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA++VYDIT+R +FD+V+RWL+EL+ H D + +MLVGNK DLE +RAV
Sbjct: 78 VTSAYYRGAVGALIVYDITRRTTFDSVSRWLDELKTHCDTTVAMMLVGNKCDLENIRAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+ K AE +GL FMETSAL+STNV AF V+ EIY VS+K L S++ +
Sbjct: 138 IEEGKSLAEAQGLFFMETSALDSTNVRTAFEMVIREIYNNVSRKVLN----SDTYKAELS 193
Query: 181 LKATNIVVPGQEPESGRRSY-NCCTS 205
+ ++V G +SY +CC++
Sbjct: 194 VDRVSLVNNGAATSKQSKSYFSCCST 219
>gi|168001170|ref|XP_001753288.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162695574|gb|EDQ81917.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/208 (55%), Positives = 157/208 (75%), Gaps = 12/208 (5%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LL+R+AR+EF+L+SKATIGVEFQT+++ I K +KAQIWDTAGQER+RA
Sbjct: 17 LIGDSAVGKSNLLSRYARNEFNLNSKATIGVEFQTQSMEIGGKEIKAQIWDTAGQERFRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA++VYDI++R +F+NV RWL+ELR H+D ++++MLVGNK DL+ +R V
Sbjct: 77 VTSAYYRGAVGALIVYDISRRGTFENVGRWLDELRVHSDASVVVMLVGNKCDLDNIREVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESG---GS 177
E+A A+ E + F+ETSA+++TNV AF +V+ EIYR+VSKK L ++ +S GS
Sbjct: 137 QEEATLLAQNEKMSFIETSAMDATNVTNAFQSVVKEIYRVVSKKPLASSTSMKSNTVLGS 196
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCCTS 205
S L + P + NCC++
Sbjct: 197 SQRLAGIDDTQPKK---------NCCST 215
>gi|148908929|gb|ABR17569.1| unknown [Picea sitchensis]
Length = 217
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 115/203 (56%), Positives = 152/203 (74%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LL+R+AR+EF ++SKATIGVEFQT+++ K +KAQIWDTAGQER+RA
Sbjct: 15 LIGDSAVGKSNLLSRYARNEFHMNSKATIGVEFQTQSMEFDGKEIKAQIWDTAGQERFRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA++VYDI++R +F++V RWL+EL+ H+D NI+ MLVGNK DLETLR VP
Sbjct: 75 VTSAYYRGAVGALVVYDISRRHTFESVGRWLDELKMHSDMNIVTMLVGNKCDLETLREVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E++K AE E L F+ETSAL +TNV AF V+ E+Y +S+KAL ++ S+
Sbjct: 135 IEESKALAEAEKLFFIETSALNATNVNDAFQIVIKEVYNNMSRKALNSDSYKPKLLSNRS 194
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
K + + ++G + Y CC
Sbjct: 195 TKVSLVPNGDAATKTGLKKYACC 217
>gi|115477389|ref|NP_001062290.1| Os08g0525000 [Oryza sativa Japonica Group]
gi|29647488|dbj|BAC75417.1| putative GTP-binding protein(RAB11G) [Oryza sativa Japonica Group]
gi|113624259|dbj|BAF24204.1| Os08g0525000 [Oryza sativa Japonica Group]
gi|215737031|dbj|BAG95960.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 216
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/205 (57%), Positives = 149/205 (72%), Gaps = 8/205 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGKS LL+R+AR+EF+L SKATIGVEFQT+++ I+ K+VKAQIWDTAGQER+RA
Sbjct: 18 IIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDINGKDVKAQIWDTAGQERFRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA GA+LVYDI++R +FDNV RWL+EL H+D + MLVGNK DL+ +R VP
Sbjct: 78 VTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVAKMLVGNKCDLDNIREVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+ K AE EGL FMETSAL+STNV AF V+ EIY VS+K L S +
Sbjct: 138 VEEGKALAEAEGLFFMETSALDSTNVRTAFEIVIKEIYSNVSRKILN------SDSYKAE 191
Query: 181 LKATNIVVPGQEPESGRRS--YNCC 203
L + + G + ++S + CC
Sbjct: 192 LSLNRVSIEGDSKDDQKQSNRFGCC 216
>gi|58267306|ref|XP_570809.1| ras-related protein ypt3 (rab) [Cryptococcus neoformans var.
neoformans JEC21]
gi|57227043|gb|AAW43502.1| ras-related protein ypt3 (rab), putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 205
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 115/195 (58%), Positives = 149/195 (76%), Gaps = 8/195 (4%)
Query: 11 QLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAV 70
LL+RF R+EF+L+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA+TSAYYRGAV
Sbjct: 17 NLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTAGQERYRAITSAYYRGAV 76
Query: 71 GAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEK 130
GA+LVYDI K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL+ LRAV T++AK+FA +
Sbjct: 77 GALLVYDIAKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLKHLRAVSTDEAKQFATE 136
Query: 131 EGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDE--SESGGSSSLLKATNIVV 188
GL F+ETSAL+++NVE AF +LT+IYRIVS K+L ++ + SGG T +V
Sbjct: 137 NGLSFIETSALDASNVESAFQNILTDIYRIVSSKSLESSGDVIKPSGGE------TILVA 190
Query: 189 PGQEPESGRRSYNCC 203
P + + CC
Sbjct: 191 PTADDGGAKSGSKCC 205
>gi|68491615|ref|XP_710395.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|68491632|ref|XP_710387.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46431579|gb|EAK91125.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46431588|gb|EAK91133.1| likely rab family GTP-binding protein [Candida albicans SC5314]
Length = 222
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 114/175 (65%), Positives = 140/175 (80%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF RDEF+L+S++TIGVEF T+TL I K VKAQIWDTAGQERYRA
Sbjct: 20 LIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI K +S+++V+RWL+EL+ HAD NIII LVGNKSDL+ LRAVP
Sbjct: 80 ITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIIIELVGNKSDLDHLRAVP 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESG 175
TE+AK FA + L F E SAL S NV+L+F +L IY ++SK L ND ++
Sbjct: 140 TEEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLENNDSKQTN 194
>gi|161761229|pdb|3BFK|A Chain A, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761230|pdb|3BFK|B Chain B, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761231|pdb|3BFK|C Chain C, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761232|pdb|3BFK|D Chain D, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761233|pdb|3BFK|E Chain E, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
Length = 181
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 113/170 (66%), Positives = 142/170 (83%), Gaps = 1/170 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVI-HHKNVKAQIWDTAGQERYR 59
LIGDS VGKS LL+RF RDEF+L+SK+TIGVEF TK++ + ++K +KAQIWDTAGQERYR
Sbjct: 12 LIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDTAGQERYR 71
Query: 60 AVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAV 119
A+TSAYYRGAVGA+LVYDITK+ SF+N+ +WL+ELR +AD NI+I+LVGNKSDL+ LR +
Sbjct: 72 AITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGNKSDLKHLRVI 131
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAN 169
DA ++A+KE L F+ETSALE+TNVELAF +L EIY + KK T N
Sbjct: 132 NDNDATQYAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQATKN 181
>gi|326503068|dbj|BAJ99159.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506770|dbj|BAJ91426.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 223
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 120/208 (57%), Positives = 153/208 (73%), Gaps = 6/208 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
L+GDS+VGKS LLARFAR+EF +SK+TIGVEFQT+ LVI K +KAQIWDTAGQER+RA
Sbjct: 19 LLGDSSVGKSNLLARFARNEFFPNSKSTIGVEFQTQKLVIDGKEIKAQIWDTAGQERFRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA+LVYDIT+RQ+FD+V RWL EL H+D N++ +L+GNK+DL+ R V
Sbjct: 79 VTSAYYRGAVGALLVYDITRRQTFDSVGRWLNELHAHSDMNVVTILIGNKTDLKHAREVS 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
+ K AE +GL FMETSAL+S+NV AF TV+ EIY I+S+K + ++ +S SL
Sbjct: 139 PAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVKEIYSILSRKVFQSQEQKKS-ELQSL 197
Query: 181 LKATNIVVPGQEP---ESGRRSYNCCTS 205
+V+ P SG R CC+S
Sbjct: 198 SNGKAVVLQSDAPSATSSGGRW--CCSS 223
>gi|15224226|ref|NP_181842.1| Ras-related protein ARA-4 [Arabidopsis thaliana]
gi|114089|sp|P28187.1|RAA5C_ARATH RecName: Full=Ras-related protein RABA5c; Short=AtRABA5c; AltName:
Full=Ras-related protein Ara-4; AltName:
Full=Ras-related protein Rab11F; Short=AtRab11F
gi|217839|dbj|BAA00831.1| small GTP-binding protein [Arabidopsis thaliana]
gi|3763922|gb|AAC64302.1| Ras-related GTP-binding protein (ARA-4) [Arabidopsis thaliana]
gi|107738301|gb|ABF83674.1| At2g43130 [Arabidopsis thaliana]
gi|222423848|dbj|BAH19889.1| AT2G43130 [Arabidopsis thaliana]
gi|330255118|gb|AEC10212.1| Ras-related protein ARA-4 [Arabidopsis thaliana]
Length = 214
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 116/204 (56%), Positives = 152/204 (74%), Gaps = 7/204 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGKS LL R+AR+EF+ +SKATIGVEFQT++++I K VKAQIWDTAGQER+RA
Sbjct: 17 IIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTAGQERFRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA++VYDIT+ +F+NV RWL+EL H+D + ML+GNK DLE++RAV
Sbjct: 77 VTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCDLESIRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+ K AE EGL FMETSAL+STNV+ AF V+ EIY +S+K L ++ E
Sbjct: 137 VEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQLNSDSYKEE------ 190
Query: 181 LKATNIVVPGQEPESGRRSYNCCT 204
L + + E E G ++++CC+
Sbjct: 191 LTVNRVSLVKNENE-GTKTFSCCS 213
>gi|356527445|ref|XP_003532321.1| PREDICTED: ras-related protein RABA5d-like [Glycine max]
gi|499068|emb|CAA54506.1| GTPase [Glycine max]
Length = 219
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/205 (57%), Positives = 153/205 (74%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGKS LL+R+AR+EF++ SKATIGVEFQT+ L I K VKAQIWDTAGQER+RA
Sbjct: 18 IIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQCLEIDSKEVKAQIWDTAGQERFRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA++VYDI++R +FD+V RWL+EL+ H D + +MLVGNK DLE +RAV
Sbjct: 78 VTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHCDTTVAMMLVGNKCDLENIRAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
++ K AE EGL FMETSAL+STNV++AF V+ EIY VS+K L SE+ +
Sbjct: 138 IDEGKSLAEAEGLFFMETSALDSTNVKMAFEMVIREIYNNVSRKVLN----SETYKAELS 193
Query: 181 LKATNIVVPGQEPESGRRSY-NCCT 204
+ ++V G ++Y +CC+
Sbjct: 194 VNRVSLVNNGAATSKQNQTYFSCCS 218
>gi|363807622|ref|NP_001242668.1| uncharacterized protein LOC100789187 [Glycine max]
gi|255641449|gb|ACU21000.1| unknown [Glycine max]
Length = 226
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 119/209 (56%), Positives = 152/209 (72%), Gaps = 5/209 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LLARFARDEF +SK+TIGVEFQT+ + I+ K VKAQIWDTAGQER+RA
Sbjct: 19 LIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA+LVYDI++RQ+FD++ RWL EL H+D N++ +LVGNKSDL+ R V
Sbjct: 79 VTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDARKVA 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T + K AE +GL FMETSAL+S+NV AF TV+ EIY I+S+K + + E + +
Sbjct: 139 TAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMMSQ-ELNKQDVTRI 197
Query: 181 LKATNIVVPGQEPESG----RRSYNCCTS 205
+V+ G+ G + CC+S
Sbjct: 198 ENGKTVVLQGEGEGDGEADAQSKKRCCSS 226
>gi|5714660|gb|AAD48019.1| Rab GTP-binding protein Rab11b [Gossypium hirsutum]
Length = 224
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/213 (57%), Positives = 153/213 (71%), Gaps = 15/213 (7%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
L GDSAVGKS LLARFAR+EF DSK+TIGVE QT+ L I+ K VKAQIWDTAGQER+RA
Sbjct: 19 LDGDSAVGKSNLLARFARNEFYPDSKSTIGVELQTQKLDINGKEVKAQIWDTAGQERFRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA+LVYDI++RQ+FD++ RWL EL+ H+D N++ +LVGNKSDL R V
Sbjct: 79 VTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELQTHSDMNVVTILVGNKSDLRDAREVS 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T + K AE +GL FMETSAL+S+NV AF TV+ EIY I+S+K + ++ E +
Sbjct: 139 TAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILSRKVMMSH---ELKKQDAP 195
Query: 181 LKATNIVVPGQE--------PESGRRSYNCCTS 205
L +V+ G E P+SG CC+S
Sbjct: 196 LDGKTVVLQGDENQERATESPKSG----GCCSS 224
>gi|358055772|dbj|GAA98117.1| hypothetical protein E5Q_04800 [Mixia osmundae IAM 14324]
Length = 274
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 110/158 (69%), Positives = 134/158 (84%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 50 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVDTKTIKAQIWDTAGQERYRA 109
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K ++ NV RWL+EL+ HAD NI+IMLVGNKSDL LRAVP
Sbjct: 110 ITSAYYRGAVGALLVYDIAKHPTYVNVQRWLKELKDHADSNIVIMLVGNKSDLRHLRAVP 169
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIY 158
TE+AK+FA EGL F+ETSAL+++NVE AF T+LT Y
Sbjct: 170 TEEAKQFATDEGLSFIETSALDASNVENAFQTILTGPY 207
>gi|226469320|emb|CAX70139.1| Rab-protein 11 [Schistosoma japonicum]
Length = 218
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 121/204 (59%), Positives = 146/204 (71%), Gaps = 6/204 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF RD F L+SK+TIGVEF T+ + I K +KAQIWDTAGQERYRA
Sbjct: 21 LIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEFATRNVNIDGKVIKAQIWDTAGQERYRA 80
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYD+ K QSF N+ WL ELR HA+KNI++MLVGNK DL LR V
Sbjct: 81 ITSAYYRGAVGALVVYDVCKLQSFHNLTSWLNELRDHAEKNIVMMLVGNKCDLRHLRNVG 140
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA+ FA+++GL F+ETSAL+STNVE AF +L +IY IVS N + + SL
Sbjct: 141 TEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQDIYNIVSSHPPVNNVDMK----MSL 196
Query: 181 LKATNIVVPGQEPESGRRSYNCCT 204
IV P + SG R CC
Sbjct: 197 HNNQPIVSPNADNASGGRR--CCN 218
>gi|623584|gb|AAA74116.1| putative, partial [Nicotiana tabacum]
Length = 209
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 117/204 (57%), Positives = 150/204 (73%), Gaps = 4/204 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGKS LL R+AR+EF+L SKATIGVEFQT+TL I K VKAQIWDTAGQER+RA
Sbjct: 9 IIGDSAVGKSNLLTRYARNEFNLHSKATIGVEFQTQTLEIDGKEVKAQIWDTAGQERFRA 68
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA GA++VYDIT+R +FD++ RWL+EL+ H+D + MLVGNK DL+ +RAV
Sbjct: 69 VTSAYYRGAFGALVVYDITRRTTFDSIPRWLDELKTHSDTTVARMLVGNKCDLDNIRAVS 128
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+ K AE EG+ FMETSAL++TNV AF V+ EIY VS+K L S+S +
Sbjct: 129 VEEGKSLAESEGMFFMETSALDATNVNKAFDMVIREIYNSVSRKVLN----SDSYKAELS 184
Query: 181 LKATNIVVPGQEPESGRRSYNCCT 204
+ ++V G + + Y+CC+
Sbjct: 185 VNRVSLVDNGTDGSKQNQGYSCCS 208
>gi|209878955|ref|XP_002140918.1| Rab11 protein [Cryptosporidium muris RN66]
gi|209556524|gb|EEA06569.1| Rab11 protein, putative [Cryptosporidium muris RN66]
Length = 220
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 112/166 (67%), Positives = 139/166 (83%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF RDEF+L+SK+TIGVEF TK+++ K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIMTQGKVIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+KR SF+NV RWL+ELR HAD NI+++LVGNKSDL+ LRAV
Sbjct: 76 ITSAYYRGAVGALLVYDISKRSSFENVERWLKELRDHADPNIVVLLVGNKSDLKHLRAVT 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL 166
E+A F+EKEG+ ME SAL S+NVE AF +L+EIY + S++ +
Sbjct: 136 QEEACMFSEKEGMACMEASALNSSNVEQAFHRILSEIYMLRSERQI 181
>gi|226469322|emb|CAX70140.1| Rab-protein 11 [Schistosoma japonicum]
Length = 218
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 121/204 (59%), Positives = 146/204 (71%), Gaps = 6/204 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF RD F L+SK+TIGVEF T+ + I K +KAQIWDTAGQERYRA
Sbjct: 21 LIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEFATRNVNIDGKVIKAQIWDTAGQERYRA 80
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYD+ K QSF N+ WL ELR HA+KNI++MLVGNK DL LR V
Sbjct: 81 ITSAYYRGAVGALVVYDVCKLQSFHNLTSWLNELRDHAEKNIVMMLVGNKCDLRHLRNVG 140
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA+ FA+++GL F+ETSAL+STNVE AF +L +IY IVS N + + SL
Sbjct: 141 TEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQDIYSIVSSHPPVNNIDMK----MSL 196
Query: 181 LKATNIVVPGQEPESGRRSYNCCT 204
IV P + SG R CC
Sbjct: 197 HNNQPIVSPNADNASGGRR--CCN 218
>gi|149239050|ref|XP_001525401.1| GTP-binding protein YPT32/YPT11 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450894|gb|EDK45150.1| GTP-binding protein YPT32/YPT11 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 221
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 118/205 (57%), Positives = 149/205 (72%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF RDEF+L+S++TIGVEF T+TL I K VKAQIWDTAGQERYRA
Sbjct: 20 LIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGA+GA++VYDI K +S+++V+RWL+EL+ HAD NI+I LVGNKSDL+ LRAVP
Sbjct: 80 ITSAYYRGALGALIVYDIAKTESYESVSRWLKELKEHADANIVIELVGNKSDLDHLRAVP 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FA + L F E SAL S NV+L+F +L IY ++SK L D +E GG +
Sbjct: 140 TDEARNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQL---DTNEQGGLKAA 196
Query: 181 LKATNIVVPGQEPESGRRSYN--CC 203
I + E R N CC
Sbjct: 197 TNGPTISLTPAPKERNRNKNNGGCC 221
>gi|68076363|ref|XP_680101.1| small GTPase Rab11 [Plasmodium berghei strain ANKA]
gi|56500982|emb|CAH98214.1| small GTPase Rab11, putative [Plasmodium berghei]
Length = 209
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 118/204 (57%), Positives = 154/204 (75%), Gaps = 4/204 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHH-KNVKAQIWDTAGQERYR 59
LIGDS VGKS LL+RF RDEF+L+SK+TIGVEF TK++ + + K +KAQIWDTAGQERYR
Sbjct: 9 LIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNDKIIKAQIWDTAGQERYR 68
Query: 60 AVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAV 119
A+TSAYYRGAVGA+LVYDITK+ +F+N+ +WL+ELR +AD NI+I+LVGNKSDL+ LR +
Sbjct: 69 AITSAYYRGAVGALLVYDITKKNTFENIEKWLKELRDNADSNIVILLVGNKSDLKHLRVI 128
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSS 179
DA +FA+KE L F+ETSALE+TNVELAF +L EIY + KK T ++++ +
Sbjct: 129 NDNDATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQATKSEDNVNIQPRG 188
Query: 180 LLKATNIVVPGQEPESGRRSYNCC 203
K N+ E E ++ CC
Sbjct: 189 --KKINVDNDNDEDEKKTKT-KCC 209
>gi|385303217|gb|EIF47306.1| gtp-binding protein ypt32 ypt11 [Dekkera bruxellensis AWRI1499]
Length = 220
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 114/204 (55%), Positives = 152/204 (74%), Gaps = 4/204 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS+VGK+ LL+RF RDEF+ DS+ATIGVEF T+TL I+ K +KAQIWDTAGQERYRA
Sbjct: 20 LIGDSSVGKTNLLSRFTRDEFNPDSRATIGVEFATRTLEINGKRIKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T+AYYRGAVGA++VYDI+ S+++V+RWL+E++ HAD NI+I LVGNKSDLE LRAVP
Sbjct: 80 ITAAYYRGAVGALVVYDISNSDSYESVSRWLKEMKEHADANIVIALVGNKSDLEHLRAVP 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+A+ FA + L F E SAL + NVE F ++ IY +VSK+ D E+G ++
Sbjct: 140 TEEARNFAAEHNLLFTEASALNADNVEFTFHQLIKSIYDMVSKRKF---DMDENGVANKD 196
Query: 181 LKATNI-VVPGQEPESGRRSYNCC 203
L + I + P + + ++ NCC
Sbjct: 197 LNSKTITLTPAPKDKKVSKNSNCC 220
>gi|302308393|ref|NP_985289.2| AER434Cp [Ashbya gossypii ATCC 10895]
gi|299789434|gb|AAS53113.2| AER434Cp [Ashbya gossypii ATCC 10895]
gi|374108515|gb|AEY97422.1| FAER434Cp [Ashbya gossypii FDAG1]
Length = 219
Score = 236 bits (601), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 113/204 (55%), Positives = 154/204 (75%), Gaps = 4/204 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF DEF+++SK+TIGVEF T+T+ + K VKAQIWDTAGQERYRA
Sbjct: 19 LIGDSGVGKSNLLSRFTTDEFNVNSKSTIGVEFATRTIEVEGKKVKAQIWDTAGQERYRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI+K S++N WL ELR +AD+N+ + L+GNKSDL LRAVP
Sbjct: 79 ITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADENVAVGLIGNKSDLAHLRAVP 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK +A++ + F ETSAL + NV+LAF ++T IY++VSK + D SE+ GS ++
Sbjct: 139 TDEAKNYAQENQMLFTETSALNAENVDLAFRELITAIYQMVSKNQV---DLSENNGSGTV 195
Query: 181 LKATNI-VVPGQEPESGRRSYNCC 203
+ I + P +S +++ NCC
Sbjct: 196 PRGPTISLAPAPSEKSKKKTNNCC 219
>gi|219130377|ref|XP_002185343.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403258|gb|EEC43212.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 214
Score = 236 bits (601), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 114/203 (56%), Positives = 153/203 (75%), Gaps = 8/203 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF TK++ K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQAEGKTIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K +F+NV RWL+ELR HA+ NI++MLVGNKSDL LRAV
Sbjct: 77 ITSAYYRGAVGALLVYDISKHGTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLRAVE 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A F+E+ L F+ETSAL+++ V+ AF +LTEIYR++S++ N ++E ++ +
Sbjct: 137 TDEAMAFSEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRR----NMQAEENANAPM 192
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
I + +SG + CC
Sbjct: 193 SAGHKISL----SQSGDKKKGCC 211
>gi|308800306|ref|XP_003074934.1| Rab1 small GTPase from the Rab subfamily (IC) [Ostreococcus tauri]
gi|116061486|emb|CAL52204.1| Rab1 small GTPase from the Rab subfamily (IC) [Ostreococcus tauri]
Length = 214
Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 116/206 (56%), Positives = 150/206 (72%), Gaps = 9/206 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
L+GDS VGKS LL+RF R+EF L+SK+TIGVEF T+T+ I +K +KAQIWDTAGQERYRA
Sbjct: 16 LVGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIEIQNKIIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T + +F NV +WL ELR HAD NI+IMLVGNK DL LR +
Sbjct: 76 ITSAYYRGAVGALLVYDVTNKDTFGNVEKWLSELRDHADANIVIMLVGNKCDLAQLRVIQ 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSK-KALTANDESESGGSSS 179
A++FA+ E L F+ETSAL++TNVE AF+ L+ +Y +VSK +A+ A + S S
Sbjct: 136 AVKAQQFADTEDLIFIETSALDATNVETAFINALSNVYNVVSKNQAVNAEETSNKQNRSI 195
Query: 180 LLKATNIVVPGQEPESGRRSYNCCTS 205
L+ A G P+S CC++
Sbjct: 196 LISAAE---DGFRPKS-----KCCST 213
>gi|405977015|gb|EKC41487.1| Ras-related protein Rab-11B [Crassostrea gigas]
Length = 172
Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 110/155 (70%), Positives = 132/155 (85%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLT 155
T++AK FAEK L F+ETSAL+STNVE AF +LT
Sbjct: 136 TDEAKAFAEKNNLSFIETSALDSTNVETAFQNILT 170
>gi|242079903|ref|XP_002444720.1| hypothetical protein SORBIDRAFT_07g026600 [Sorghum bicolor]
gi|241941070|gb|EES14215.1| hypothetical protein SORBIDRAFT_07g026600 [Sorghum bicolor]
Length = 216
Score = 235 bits (599), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 147/205 (71%), Gaps = 8/205 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGKS LL+R+AR+EFSL SKATIGVEFQT+++ I K VKAQIWDTAGQER+RA
Sbjct: 18 IIGDSAVGKSNLLSRYARNEFSLHSKATIGVEFQTQSMDIDGKEVKAQIWDTAGQERFRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA GA+LVYDI++R +FDNV RWL+EL H+D + MLVGNK DL+ +R VP
Sbjct: 78 VTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVAKMLVGNKCDLDNIREVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+ K AE EGL FMETSAL++TNV AF V+ EIY VS+K L S +
Sbjct: 138 VEEGKALAEAEGLFFMETSALDATNVRTAFEIVIREIYSSVSRKILN------SDSYKAE 191
Query: 181 LKATNIVVPGQEPESGRRS--YNCC 203
L + + G + +++ + CC
Sbjct: 192 LSLNRVSIDGDSKDDKKQTSRFGCC 216
>gi|326493914|dbj|BAJ85419.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 219
Score = 235 bits (599), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 117/206 (56%), Positives = 147/206 (71%), Gaps = 9/206 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGKS LL+R+AR+EF+L SKATIGVEFQT+++ I K VKAQIWDTAGQER+RA
Sbjct: 20 IIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDIDGKEVKAQIWDTAGQERFRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA GA+LVYDI++R +FDNV RWL+EL H+D + MLVGNK DL+ +R VP
Sbjct: 80 VTSAYYRGAFGALLVYDISRRGTFDNVGRWLQELNTHSDTTVAKMLVGNKCDLDNIREVP 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+ K AE EGL FMETSAL+STNV AF V+ EIY VS+K L S +
Sbjct: 140 VEEGKALAESEGLFFMETSALDSTNVNTAFELVIKEIYNSVSRKILN------SDSYKAE 193
Query: 181 LKATNIVVPGQEPESGRRS---YNCC 203
L + + + + G++ + CC
Sbjct: 194 LSLNRVSIDDSDSKDGQKQTSRFGCC 219
>gi|224285593|gb|ACN40515.1| unknown [Picea sitchensis]
Length = 217
Score = 235 bits (599), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 154/205 (75%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LL+R+AR+EF ++SKATIGVEFQT+++ K +KAQIWDTAGQER+RA
Sbjct: 15 LIGDSAVGKSNLLSRYARNEFHMNSKATIGVEFQTQSMEFDGKEIKAQIWDTAGQERFRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA++VYDI++R +F++V RWL+EL+ H+D NI+ MLVGNK DLETLR VP
Sbjct: 75 VTSAYYRGAVGALVVYDISRRHTFESVGRWLDELKMHSDMNIVTMLVGNKCDLETLREVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E++K AE E L F+ETSAL +TNV AF V+ E+Y +S+KAL ++ S+
Sbjct: 135 IEESKALAEAEKLFFIETSALNATNVNDAFQIVIKEVYNNMSRKALNSDSYKSKLLSNRS 194
Query: 181 LKATNIVVPGQEP--ESGRRSYNCC 203
K + +VP + ++ + Y CC
Sbjct: 195 TKVS--LVPNGDAATKTELKKYACC 217
>gi|255070867|ref|XP_002507515.1| small GTPase from the rab subfamily [Micromonas sp. RCC299]
gi|226522790|gb|ACO68773.1| small GTPase from the rab subfamily [Micromonas sp. RCC299]
Length = 217
Score = 235 bits (599), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 150/205 (73%), Gaps = 7/205 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTL--VIHHKNVKAQIWDTAGQERY 58
LIGDS VGKS LL+RF R+EF +SK+TIGVEF T+ + + K VKAQIWDTAGQERY
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFCSESKSTIGVEFATRCIEVCLEGKTVKAQIWDTAGQERY 75
Query: 59 RAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRA 118
RA+TSAYYRGAVGA+LVYDITK +S+DNV +WL+ELR HAD NI+I LVGNK+DL+ LR+
Sbjct: 76 RAITSAYYRGAVGALLVYDITKSESYDNVQKWLKELRDHADSNIVITLVGNKTDLKHLRS 135
Query: 119 VPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSS 178
V E A EF+ EGL F+ETSA ESTNV++AF LT++Y I+SKK+ ++ + + G +
Sbjct: 136 VQAESAAEFSSIEGLSFVETSACESTNVDVAFKKNLTDVYHIISKKSCSSAEVDDKNGGA 195
Query: 179 SLLKATNIVVPGQEPESGRRSYNCC 203
+++ V S + CC
Sbjct: 196 GIIE-----VKAISESSKKNPSKCC 215
>gi|10764861|gb|AAF24551.2|AC007508_14 F1K23.21 [Arabidopsis thaliana]
Length = 212
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 120/205 (58%), Positives = 151/205 (73%), Gaps = 10/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
L GDS VGKS LL+RF R++FS DS+ATIGVEF T+++ K VKAQIWDTAGQE
Sbjct: 18 LTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQIWDTAGQE---- 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
SAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D NI+IMLVGNK+DL LRA+
Sbjct: 74 --SAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRHLRAIS 131
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK FAE+E FMETSALE+ NV+ AF VLT+IYR+VSKKAL A D+ +++L
Sbjct: 132 TEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSKKALEAGDDP----TTAL 187
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I V G++ S + CC++
Sbjct: 188 PKGQMINVGGRDDISAVKKPGCCSA 212
>gi|294463635|gb|ADE77345.1| unknown [Picea sitchensis]
Length = 223
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 116/207 (56%), Positives = 153/207 (73%), Gaps = 6/207 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LLAR+AR+EF +SK+TIGVEFQT+T+ I K +KAQIWDTAGQER+RA
Sbjct: 19 LIGDSAVGKSNLLARYARNEFYPNSKSTIGVEFQTQTMQIDGKEIKAQIWDTAGQERFRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA++VYDI++RQ+FDN++RWL+EL H+D N++ ++VGNK+DL R V
Sbjct: 79 VTSAYYRGAVGALVVYDISRRQTFDNISRWLDELHTHSDMNVVTVIVGNKTDLLDAREVS 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+ AE + + F+ETSAL+STNV+LAF TV+ EIY I+S+K L+ E S +
Sbjct: 139 TEEGAALAEAQNIYFVETSALDSTNVQLAFQTVVKEIYNILSRKVLSCQ---EQKLESKI 195
Query: 181 LKATNIVVPGQEPESGRRSYN---CCT 204
+V+ E ES + CC+
Sbjct: 196 SNGKTVVLQEAESESTAKQTGKLWCCS 222
>gi|222641954|gb|EEE70086.1| hypothetical protein OsJ_30082 [Oryza sativa Japonica Group]
Length = 260
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 115/193 (59%), Positives = 150/193 (77%), Gaps = 7/193 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
++GDSAVGK+QLL RF +DEF LDSK+TIGVEFQT+TL +H K VKAQIWDTAGQERYRA
Sbjct: 27 VVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSLHRKRVKAQIWDTAGQERYRA 86
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLET-LRAV 119
VTSAYYRGA+GAM+VYDIT+R++F+NVARW+EELR HAD + ++ L+GNK+D+ R V
Sbjct: 87 VTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVVALIGNKADMPAGRREV 146
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND-----ESES 174
++A FAE++GL F E SAL NV+ AFLT+L EI+ +VS++AL ++ + +
Sbjct: 147 AADEAARFAEEQGLFFSEASALSGDNVDRAFLTLLEEIFAVVSRRALELDEARRMRDGGA 206
Query: 175 GGSSSL-LKATNI 186
GG L LK T +
Sbjct: 207 GGVQVLSLKGTTL 219
>gi|326491937|dbj|BAJ98193.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326496867|dbj|BAJ98460.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 247
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 109/167 (65%), Positives = 137/167 (82%), Gaps = 1/167 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
++GDSAVGK+QLL RFA+DEF LDSK+TIGVEFQT+TL +H K VKAQIWDTAGQERYRA
Sbjct: 30 VVGDSAVGKTQLLGRFAKDEFFLDSKSTIGVEFQTRTLTLHRKRVKAQIWDTAGQERYRA 89
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLET-LRAV 119
VTSAYYRGA+GAM+VYD+T+R +FD+V RW+EELR HAD + ++ LVGNK+D R V
Sbjct: 90 VTSAYYRGALGAMVVYDVTRRATFDHVPRWVEELRAHADGSTVVALVGNKADAPAHRREV 149
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL 166
P ++A FAE++GL F E SAL NVE AFL +L E++ +VS++AL
Sbjct: 150 PADEAARFAEEQGLFFSEASALTGDNVERAFLALLEEVFAVVSRRAL 196
>gi|222640895|gb|EEE69027.1| hypothetical protein OsJ_28001 [Oryza sativa Japonica Group]
Length = 407
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 112/169 (66%), Positives = 138/169 (81%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGKS LL+R+AR+EF+L SKATIGVEFQT+++ I+ K+VKAQIWDTAGQER+RA
Sbjct: 18 IIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDINGKDVKAQIWDTAGQERFRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA GA+LVYDI++R +FDNV RWL+EL H+D + MLVGNK DL+ +R VP
Sbjct: 78 VTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVAKMLVGNKCDLDNIREVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAN 169
E+ K AE EGL FMETSAL+STNV AF V+ EIY VS+K L ++
Sbjct: 138 VEEGKALAEAEGLFFMETSALDSTNVRTAFEIVIKEIYSNVSRKILNSD 186
>gi|338727253|ref|XP_001917048.2| PREDICTED: ras-related protein Rab-11B-like [Equus caballus]
Length = 329
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 110/159 (69%), Positives = 134/159 (84%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 144 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 203
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 204 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 263
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYR 159
T++A+ FAEK L F+ETSAL+STNVE AF +LT +R
Sbjct: 264 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTGRHR 302
>gi|356569119|ref|XP_003552753.1| PREDICTED: ras-related protein RABA5d-like [Glycine max]
Length = 219
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 118/205 (57%), Positives = 151/205 (73%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGKS LL+R+AR+EF++ SKATIGVEFQT+ L I K VKAQIWDTAGQER+RA
Sbjct: 18 IIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQCLEIDSKEVKAQIWDTAGQERFRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA++VYDI++R +FD+V RWL+EL+ H D + +MLVGNK DLE +RAV
Sbjct: 78 VTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHCDTTVAMMLVGNKCDLENIRAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
++ K AE EGL FMETSAL+STNV+ AF V+ EIY VS+K L SE+ +
Sbjct: 138 VDEGKSLAEAEGLFFMETSALDSTNVKTAFEMVIREIYTNVSRKVLN----SETYKAELS 193
Query: 181 LKATNIVVPGQEPESGRRSY-NCCT 204
+ ++V G + Y +CC+
Sbjct: 194 VNRVSLVNNGASTSKQNQPYFSCCS 218
>gi|357148531|ref|XP_003574801.1| PREDICTED: ras-related protein RABA5c-like [Brachypodium
distachyon]
Length = 217
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 112/169 (66%), Positives = 135/169 (79%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGKS LL+R+AR+EF+ SKATIGVEFQT+T+ I K VKAQIWDTAGQER+RA
Sbjct: 18 IIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQTMEIDSKEVKAQIWDTAGQERFRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA GA+LVYD+++R +FDNV RWL+EL H+D + MLVGNK DLE +R VP
Sbjct: 78 VTSAYYRGAFGALLVYDVSRRSTFDNVGRWLQELNTHSDTTVAKMLVGNKCDLENIREVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAN 169
E+ K AE EGL FMETSAL+STNV AF V+ EIY VS+K L ++
Sbjct: 138 VEEGKALAESEGLFFMETSALDSTNVNTAFELVIKEIYSSVSRKILNSD 186
>gi|66826405|ref|XP_646557.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|548673|sp|P36412.1|RB11A_DICDI RecName: Full=Ras-related protein Rab-11A
gi|414965|gb|AAA80149.1| Rab11 [Dictyostelium discoideum]
gi|60474032|gb|EAL71969.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 214
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 118/206 (57%), Positives = 153/206 (74%), Gaps = 12/206 (5%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL++K+TIGVEF T+T+ K +KAQ+WDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTIKAQVWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K+ ++ +V RW+ ELR +AD+NI IMLVGNKSDL LR V
Sbjct: 78 ITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENADRNIEIMLVGNKSDLRHLREVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AKEF+EK L F+ETSAL+S+NVELAF +LT+IY I+S+ S S G +
Sbjct: 138 TDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQIYHIMSRP-------SHSTGPQTT 190
Query: 181 LKAT--NIVVP-GQEPESGRRSYNCC 203
+ + I++P EP + + CC
Sbjct: 191 IDSNTETIILPTTSEPPAAKS--GCC 214
>gi|339521883|gb|AEJ84106.1| Ras-like protein Rab-11B [Capra hircus]
Length = 218
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/210 (58%), Positives = 150/210 (71%), Gaps = 17/210 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG S VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGGSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++N RWL+ELR HAD NI+I LVG KS L LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKPLTYENGERWLKELRDHADSNIVIRLVGTKSALRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ F+EK L F+ TSAL+STNVE AF +LTEIYRIVS+K + A+DES
Sbjct: 136 TDEARAFSEKNNLSFIATSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGN-- 193
Query: 178 SSLLKATNIVVP----GQEPESGRRSYNCC 203
+I VP GQ P CC
Sbjct: 194 ----NFVDISVPPTTDGQNPN----KLQCC 215
>gi|147784781|emb|CAN66526.1| hypothetical protein VITISV_043978 [Vitis vinifera]
Length = 215
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 155/205 (75%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGKS LL+R+AR+EF+++SKATIGVEFQT+++ I K VKAQIWDTAGQER+RA
Sbjct: 15 IIGDSAVGKSNLLSRYARNEFNINSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA++VYDI++R +FD+VARWL+EL+ H++ + MLVGNKSDLE +R V
Sbjct: 75 VTSAYYRGAVGALVVYDISRRSTFDSVARWLDELKTHSETTVARMLVGNKSDLENIRDVS 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+ K AE EGL F+ETSAL+STNV+ AF V+ EIY +S+K L S+S +
Sbjct: 135 VEEGKSLAEAEGLFFIETSALDSTNVKKAFEIVIREIYNNISRKVLN----SDSYKAELS 190
Query: 181 LKATNIVVPGQE-PESGRRSYNCCT 204
+ ++V G + + Y+CC+
Sbjct: 191 VNRVSLVSNGADGAKQANSRYSCCS 215
>gi|449468736|ref|XP_004152077.1| PREDICTED: ras-related protein RABA5d-like [Cucumis sativus]
gi|449502254|ref|XP_004161590.1| PREDICTED: ras-related protein RABA5d-like [Cucumis sativus]
Length = 217
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/169 (65%), Positives = 137/169 (81%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGKS LL+R+AR+EF+L SKATIGVEFQT+ + I K VKAQIWDTAGQER+RA
Sbjct: 18 IIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA++VYDI++R +FD+V RWL+EL+ H+D + +MLVGNK DLE +R V
Sbjct: 78 VTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVAMMLVGNKCDLENIRDVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAN 169
ED AE EGL FMETSAL+STNV+ AF V+ EIY VS+K L ++
Sbjct: 138 VEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSD 186
>gi|118387620|ref|XP_001026914.1| Ras-related protein Rab11A, putative [Tetrahymena thermophila]
gi|89308681|gb|EAS06669.1| Ras-related protein Rab11A, putative [Tetrahymena thermophila
SB210]
gi|307777774|dbj|BAJ21283.1| Rab-family small GTPase Rab11B [Tetrahymena thermophila]
Length = 214
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 109/203 (53%), Positives = 143/203 (70%), Gaps = 5/203 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGK+ LL+RF ++EF++DSK TIGVEF TKT++ +K +KAQIWDTAGQE+YRA
Sbjct: 17 LIGDSGVGKTNLLSRFTKNEFNMDSKPTIGVEFATKTVITENKYIKAQIWDTAGQEKYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T+AYYRGAVGA+ +YDITK+Q+FDNV +WL ELR +AD NII ML+GNK DL+ +R V
Sbjct: 77 ITNAYYRGAVGALTLYDITKQQTFDNVKKWLHELREYADANIICMLIGNKCDLQEMRQVK 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA +FAE+ L FMETSA ++ NV+ AF ++TEIY L E +
Sbjct: 137 TEDAAKFAEENNLAFMETSAAQAINVDQAFQKLITEIYN-----NLKTRPNEEKKKAQPQ 191
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
NI+ ++P + CC
Sbjct: 192 QNGNNIIKDFKQPTQAEKEKKCC 214
>gi|363748106|ref|XP_003644271.1| hypothetical protein Ecym_1207 [Eremothecium cymbalariae
DBVPG#7215]
gi|356887903|gb|AET37454.1| hypothetical protein Ecym_1207 [Eremothecium cymbalariae
DBVPG#7215]
Length = 217
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 112/203 (55%), Positives = 150/203 (73%), Gaps = 3/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF DEF+++SK+TIGVEF T+T+ + K VKAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTTDEFNVNSKSTIGVEFATRTIEVEGKKVKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI+K S++N WL ELR +AD+N+ + L+GNKSDL LRAVP
Sbjct: 78 ITSAYYRGAVGALIVYDISKSSSYENCNHWLAELRENADENVAVGLIGNKSDLAHLRAVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK +A++ + F ETSAL + NV+LAF ++T IY++VSK + D SE G ++
Sbjct: 138 TDEAKNYAQENQMLFTETSALNAENVDLAFRELITAIYQMVSKNQV---DLSEKSGGGTM 194
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ I + E ++S NCC
Sbjct: 195 PRGPTISLTPASNEKTKKSNNCC 217
>gi|326935770|ref|XP_003213940.1| PREDICTED: ras-related protein Rab-11A-like, partial [Meleagris
gallopavo]
Length = 252
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 109/155 (70%), Positives = 133/155 (85%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + +K VKAQIWDTAGQERYRA
Sbjct: 22 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQERYRA 81
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++N RWL EL+ HAD NIIIMLVGNKSDL LRAVP
Sbjct: 82 ITSAYYRGAVGALLVYDIAKYLTYENAERWLTELQDHADANIIIMLVGNKSDLRHLRAVP 141
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLT 155
T++A+ FAEK GL F+ETSAL+STNVE+AF +L+
Sbjct: 142 TDEARSFAEKNGLSFLETSALDSTNVEMAFHNILS 176
>gi|30677910|ref|NP_171628.2| Rab family protein [Arabidopsis thaliana]
gi|75174997|sp|Q9LNK1.1|RABA3_ARATH RecName: Full=Ras-related protein RABA3; Short=AtRABA3
gi|9665141|gb|AAF97325.1|AC023628_6 Putative GTP-binding protein [Arabidopsis thaliana]
gi|38454140|gb|AAR20764.1| At1g01200 [Arabidopsis thaliana]
gi|38604028|gb|AAR24757.1| At1g01200 [Arabidopsis thaliana]
gi|332189132|gb|AEE27253.1| Rab family protein [Arabidopsis thaliana]
Length = 237
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 122/199 (61%), Positives = 152/199 (76%), Gaps = 9/199 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGK+QLL+RF +EF DSK+TIGVEFQT+T+ + K VKAQIWDTAGQERYRA
Sbjct: 33 VIGDSAVGKTQLLSRFTHNEFCYDSKSTIGVEFQTRTITLRGKLVKAQIWDTAGQERYRA 92
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLET-LRAV 119
VTSAYYRGA+GAM+VYDITKR SFD+VARW+EELR HAD + +IMLVGNK+DL RAV
Sbjct: 93 VTSAYYRGALGAMVVYDITKRLSFDHVARWVEELRAHADDSAVIMLVGNKADLSVGKRAV 152
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYR--IVSKKALTANDESESGGS 177
PTEDA EFAE + L F E SAL NV+ AF +L EI+ +VS+KA+ ++ GG+
Sbjct: 153 PTEDAVEFAETQRLFFSEVSALSGGNVDEAFFRLLEEIFSRVVVSRKAMESD-----GGA 207
Query: 178 SSLLKATNI-VVPGQEPES 195
+ L + I V+ G + E+
Sbjct: 208 TVKLDGSRIDVISGSDLET 226
>gi|195569261|ref|XP_002102629.1| GD19397 [Drosophila simulans]
gi|194198556|gb|EDX12132.1| GD19397 [Drosophila simulans]
Length = 198
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 109/155 (70%), Positives = 133/155 (85%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL ELR HAD+NI+IMLVGNKSDL LR+VP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRSVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLT 155
T++AK FAE+ GL F+ETSAL+STNVE AF +LT
Sbjct: 136 TDEAKLFAERNGLSFIETSALDSTNVETAFQNILT 170
>gi|218201483|gb|EEC83910.1| hypothetical protein OsI_29960 [Oryza sativa Indica Group]
Length = 407
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 112/169 (66%), Positives = 137/169 (81%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGKS LL+R+AR+EF+L SKATIGVEFQT+++ I K+VKAQIWDTAGQER+RA
Sbjct: 18 IIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDIDGKDVKAQIWDTAGQERFRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA GA+LVYDI++R +FDNV RWL+EL H+D + MLVGNK DL+ +R VP
Sbjct: 78 VTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVAKMLVGNKCDLDNIREVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAN 169
E+ K AE EGL FMETSAL+STNV AF V+ EIY VS+K L ++
Sbjct: 138 VEEGKALAEAEGLFFMETSALDSTNVRTAFEIVIKEIYSNVSRKILNSD 186
>gi|406608029|emb|CCH40656.1| GTP-binding protein YPT31/YPT8 [Wickerhamomyces ciferrii]
Length = 218
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 120/206 (58%), Positives = 156/206 (75%), Gaps = 9/206 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+S++TIGVEF T+T+ I K VKAQIWDTAGQERYRA
Sbjct: 19 LIGDSGVGKSNLLSRFTRNEFNLESRSTIGVEFATRTVEIDGKRVKAQIWDTAGQERYRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K +S++NV++WL+EL+ +AD+NI+I LVGNKSDL+ LRAVP
Sbjct: 79 ITSAYYRGAVGALLVYDISKSESYENVSKWLKELKENADENIVIELVGNKSDLDHLRAVP 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDES---ESGGS 177
T++AK+F+ + L F E SAL + NV+L+F +L I+ +VSK D S SGG
Sbjct: 139 TDEAKQFSVENQLLFTEASALNAENVDLSFQQLLKSIHDMVSKHQFDMTDYSGPKPSGGP 198
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCC 203
+ L T PG E +S +S NCC
Sbjct: 199 TISLTPT----PGNE-QSKNKS-NCC 218
>gi|348527516|ref|XP_003451265.1| PREDICTED: ras-related protein Rab-25-like [Oreochromis niloticus]
Length = 207
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 109/164 (66%), Positives = 141/164 (85%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGKS LL+RF ++EF+ DS+ TIGVEF T+T+ +++ +KAQIWDTAG ERYRA
Sbjct: 15 LIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVQLNNFTIKAQIWDTAGLERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITK ++++V RWL+EL HAD +I++ML+GNKSDLE+ R+VP
Sbjct: 75 ITSAYYRGAVGALLVYDITKHLTYESVERWLKELYEHADPHIVVMLIGNKSDLESERSVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKK 164
TE+AK+FAEK+GL F+ETSAL+STNVE AF TVL EI++ VS K
Sbjct: 135 TEEAKDFAEKKGLLFLETSALDSTNVEAAFTTVLAEIHKKVSSK 178
>gi|417408504|gb|JAA50801.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 190
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 109/155 (70%), Positives = 132/155 (85%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 3 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 62
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 63 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 122
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLT 155
T++A+ FAEK L F+ETSAL+STNVE AF +LT
Sbjct: 123 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 157
>gi|42561732|ref|NP_563750.2| RAB GTPase homolog A5E [Arabidopsis thaliana]
gi|29893534|gb|AAP06819.1| putative RAS-related protein ARA-1 [Arabidopsis thaliana]
gi|332189776|gb|AEE27897.1| RAB GTPase homolog A5E [Arabidopsis thaliana]
Length = 261
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 119/208 (57%), Positives = 157/208 (75%), Gaps = 8/208 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGKS LL+R+AR+EFS +SKATIGVEFQT+++ I K VKAQIWDTAGQER+RA
Sbjct: 60 VIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTAGQERFRA 119
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA++VYDIT+R +F++V RWL+EL+ H+D + MLVGNK DLE +RAV
Sbjct: 120 VTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDLENIRAVS 179
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESE--SGGSS 178
E+ K AE+EGL F+ETSAL+STNV+ AF V+ +IY VS+K L ++ + +
Sbjct: 180 VEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLNSDTYKDELTVNRV 239
Query: 179 SLLKATNIVVPGQEPESGRRSYNCCTSS 206
SL+K N + SG ++CC+S+
Sbjct: 240 SLVKDDN---SASKQSSG---FSCCSST 261
>gi|348513149|ref|XP_003444105.1| PREDICTED: ras-related protein Rab-25-like [Oreochromis niloticus]
Length = 210
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 153/205 (74%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGKS LL+RF ++EF+ DS+ TIGVEF T+T+ I + +KAQIWDTAG ERYRA
Sbjct: 15 LIGESGVGKSNLLSRFTKNEFAHDSRTTIGVEFSTRTVRIDNLTIKAQIWDTAGLERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K ++++ RWL+EL HAD +I++MLVGNKSDLE LR VP
Sbjct: 75 ITSAYYRGAVGALLVYDISKHLTYESAERWLKELYDHADPHIVVMLVGNKSDLENLRTVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A++FAEK+GL FMETSAL+STNVE AF VLT I+ V+ + +T GS S
Sbjct: 135 TDEARDFAEKKGLMFMETSALDSTNVEAAFSEVLTAIHTKVASREVTR-------GSISA 187
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ ++ + P E + R+ CC S
Sbjct: 188 VTLSSPIGPSSEAQEERK--GCCRS 210
>gi|71480092|ref|NP_001025142.1| uncharacterized protein LOC574424 [Danio rerio]
gi|68533943|gb|AAH98608.1| Zgc:112037 [Danio rerio]
Length = 210
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 117/203 (57%), Positives = 148/203 (72%), Gaps = 10/203 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGKS LL+RF ++EFS DS+ TIGVEF T+T+ ++ +KAQIWDTAG ERYRA
Sbjct: 15 LIGESGVGKSNLLSRFTKNEFSHDSRTTIGVEFSTRTVQLNGLTIKAQIWDTAGLERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K ++++ RWL+EL HAD +I++MLVGNKSDL +R+VP
Sbjct: 75 ITSAYYRGAVGALLVYDISKHLTYESAERWLKELYDHADPHIVVMLVGNKSDLAAVRSVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAK+FAEK GL F ETSALES NVE AF TVLTEI++ V+ K +T GS
Sbjct: 135 TEDAKDFAEKNGLLFKETSALESVNVEAAFNTVLTEIHKKVNSKEVTR-------GS--- 184
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ A + P E+ CC
Sbjct: 185 ISAVTLSQPKTPAETQEEKKTCC 207
>gi|255584671|ref|XP_002533058.1| protein with unknown function [Ricinus communis]
gi|223527156|gb|EEF29328.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 121/206 (58%), Positives = 145/206 (70%), Gaps = 7/206 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LLARFAR+EF +SKATIGVEFQT+ + I K +KAQIWDTAGQER+RA
Sbjct: 19 LIGDSAVGKSNLLARFARNEFDSNSKATIGVEFQTQVVDIEGKEIKAQIWDTAGQERFRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA++VYDIT+R SFD+V RWLEEL H D MLVGNK DLE +R V
Sbjct: 79 VTSAYYRGAVGALIVYDITRRSSFDSVKRWLEELSTHCDTTAARMLVGNKCDLENIREVS 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+ K AE+E L FMETSAL+STNVE AF V+ EIY +S+K L S +
Sbjct: 139 REEGKTLAEEESLFFMETSALDSTNVEAAFEVVIREIYHNMSRKTLN------SDSYKAE 192
Query: 181 LKATNI-VVPGQEPESGRRSYNCCTS 205
L + +V S + S++CC +
Sbjct: 193 LTVNRVSLVKNNANSSKQSSFSCCAT 218
>gi|123392476|ref|XP_001300248.1| Ras-related protein Rab11C [Trichomonas vaginalis G3]
gi|62736254|gb|AAX97456.1| small Rab GTPase Rab11a [Trichomonas vaginalis]
gi|121881256|gb|EAX87318.1| Ras-related protein Rab11C, putative [Trichomonas vaginalis G3]
Length = 211
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 112/203 (55%), Positives = 149/203 (73%), Gaps = 5/203 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGK+ LL+RFARD+F+ DSK+TIGVEF TKTL I K VKAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKTNLLSRFARDQFNPDSKSTIGVEFATKTLEIEGKTVKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGA+GA+L+YDIT +F++++RWL+ELR +AD NI++MLVGNKSDL+ LRAV
Sbjct: 74 ITSAYYRGAIGALLLYDITASLTFNSLSRWLQELRENADSNIVVMLVGNKSDLQELRAVS 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED F+++E L F+ETSA +TNV+ AF T++TEI +SK+ + + D G +
Sbjct: 134 TEDGTGFSQQENLLFIETSARNATNVQEAFTTLITEIVHRLSKQNIVSPDSPAKVGPNK- 192
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ + + ++ CC
Sbjct: 193 ----GVTITSTTADDKKKKNTCC 211
>gi|114085|sp|P19892.1|RAA5E_ARATH RecName: Full=Ras-related protein RABA5e; Short=AtRABA5e; AltName:
Full=Ras-related protein Ara-1; Flags: Precursor
gi|6850310|gb|AAF29387.1|AC009999_7 Strong similarity to a RAS-related protein ARA-1 from Arabidopsis
thaliana gi|114085, and is a member of the RAS PF|00071
family. EST gb|D01026 comes from this gene [Arabidopsis
thaliana]
gi|12083322|gb|AAG48820.1|AF332457_1 putative RAS-related protein ARA-1 [Arabidopsis thaliana]
gi|538283|gb|AAC13655.1| ras-related protein [Arabidopsis thaliana]
Length = 218
Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 119/208 (57%), Positives = 157/208 (75%), Gaps = 8/208 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGKS LL+R+AR+EFS +SKATIGVEFQT+++ I K VKAQIWDTAGQER+RA
Sbjct: 17 VIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTAGQERFRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA++VYDIT+R +F++V RWL+EL+ H+D + MLVGNK DLE +RAV
Sbjct: 77 VTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDLENIRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESE--SGGSS 178
E+ K AE+EGL F+ETSAL+STNV+ AF V+ +IY VS+K L ++ + +
Sbjct: 137 VEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLNSDTYKDELTVNRV 196
Query: 179 SLLKATNIVVPGQEPESGRRSYNCCTSS 206
SL+K N + SG ++CC+S+
Sbjct: 197 SLVKDDN---SASKQSSG---FSCCSST 218
>gi|297842990|ref|XP_002889376.1| hypothetical protein ARALYDRAFT_470156 [Arabidopsis lyrata subsp.
lyrata]
gi|297335218|gb|EFH65635.1| hypothetical protein ARALYDRAFT_470156 [Arabidopsis lyrata subsp.
lyrata]
Length = 237
Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 122/198 (61%), Positives = 151/198 (76%), Gaps = 9/198 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGK+QLL+RF ++EF DSK+TIGVEFQT+T+ + K VKAQIWDTAGQERYRA
Sbjct: 33 VIGDSAVGKTQLLSRFTQNEFCYDSKSTIGVEFQTRTVTLQGKLVKAQIWDTAGQERYRA 92
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLET-LRAV 119
VTSAYYRGA+GAM+VYDITKR SFD+VARW+EELR HAD + +IMLVGNK+DL RAV
Sbjct: 93 VTSAYYRGALGAMVVYDITKRVSFDHVARWVEELRAHADDSAVIMLVGNKADLAVDKRAV 152
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYR--IVSKKALTANDESESGGS 177
PTEDA EFAE + L F E SAL NV+ AF +L EI+ +VS+KA+ ++ GG+
Sbjct: 153 PTEDAVEFAETQRLFFSEVSALSGGNVDEAFFRLLEEIFSRVVVSRKAMESD-----GGA 207
Query: 178 SSLLKATNI-VVPGQEPE 194
L + I V+ G + E
Sbjct: 208 PVKLDGSRIDVISGSDLE 225
>gi|367001354|ref|XP_003685412.1| hypothetical protein TPHA_0D03430 [Tetrapisispora phaffii CBS 4417]
gi|357523710|emb|CCE62978.1| hypothetical protein TPHA_0D03430 [Tetrapisispora phaffii CBS 4417]
Length = 223
Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 112/206 (54%), Positives = 153/206 (74%), Gaps = 3/206 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++F+L+SK+TIGVEF T+T+ + +K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTTNDFNLESKSTIGVEFATRTIEVENKKIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI+K+ S++N WL ELR +AD N+ + L+GNKSDL LRAVP
Sbjct: 78 ITSAYYRGAVGALIVYDISKQSSYENCNHWLTELRENADDNVAVGLIGNKSDLSHLRAVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
TE+AK FA++ L F ETSAL S NV+ AF ++T IY+++SK + + N+ S +G S
Sbjct: 138 TEEAKNFAQENQLLFTETSALNSENVDQAFRELITSIYQMISKHQVDLGSDNNGSGNGAS 197
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCC 203
+++ T + P ++ S NCC
Sbjct: 198 NNIKGPTISLTPTPNEKTKSSSNNCC 223
>gi|294887922|ref|XP_002772283.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239876358|gb|EER04099.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 234
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 111/182 (60%), Positives = 141/182 (77%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R EF+L+S++TIGVEF TK++ I K VKAQIWDTAGQERYRA
Sbjct: 23 LIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGEKVVKAQIWDTAGQERYRA 82
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+KR SFDN ARWL+ELR HAD +I++MLVGNK DL LRA+
Sbjct: 83 ITSAYYRGAVGALLVYDISKRSSFDNAARWLKELREHADSDIVVMLVGNKCDLSHLRAIE 142
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+A++F L F+ETSALE+TNVE AF +L +IY++ S K + + G S+
Sbjct: 143 EEEAEKFCSDNDLLFIETSALEATNVEEAFQNILEDIYKVNSSKPTPSQAAGAAAGDPSM 202
Query: 181 LK 182
++
Sbjct: 203 VE 204
>gi|217072250|gb|ACJ84485.1| unknown [Medicago truncatula]
gi|388507312|gb|AFK41722.1| unknown [Medicago truncatula]
Length = 220
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 110/169 (65%), Positives = 137/169 (81%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGKS LL+R+AR+EF+L SKATIGVEFQT++L I K VKAQIWDT GQER+RA
Sbjct: 20 IIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSLEIDSKEVKAQIWDTTGQERFRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA++VYDI++R +FD+V RWL+EL+ H D + +MLVGNK DL+ +R V
Sbjct: 80 VTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHCDTTVAMMLVGNKCDLDNIRDVS 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAN 169
E+ K AE EGL FMETSAL+STNV+ AF V+ EIY VS+K L ++
Sbjct: 140 IEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYNNVSRKVLNSD 188
>gi|330792766|ref|XP_003284458.1| rab11A, RAB family GTPase [Dictyostelium purpureum]
gi|325085601|gb|EGC39005.1| rab11A, RAB family GTPase [Dictyostelium purpureum]
Length = 217
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 109/165 (66%), Positives = 138/165 (83%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL++K+TIGVEF T+T+ K +KAQ+WDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTIKAQVWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K+ ++ +V RWL ELR +AD+NI IMLVGNKSDL LR V
Sbjct: 77 ITSAYYRGAVGALLVYDIAKQATYKSVERWLTELRENADRNIEIMLVGNKSDLRHLREVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKA 165
T++AKEF+EK L F+ETSAL+S+NVELAF +LT+IY ++S+ +
Sbjct: 137 TDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQIYHLMSRPS 181
>gi|255572910|ref|XP_002527386.1| protein with unknown function [Ricinus communis]
gi|223533238|gb|EEF34993.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 111/169 (65%), Positives = 138/169 (81%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGKS LL+R+AR+EF+L SKATIGVEFQT+++ I K VKAQIWDTAGQER+RA
Sbjct: 17 IIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA++VYDI++R +FD+V RWL+EL+ H+D + MLVGNK DLE +R V
Sbjct: 77 VTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVARMLVGNKCDLENIRDVT 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAN 169
E+ K AE EGL FMETSAL+STNV+ AF V+ EIY VS+K L ++
Sbjct: 137 VEEGKSLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKVLNSD 185
>gi|56758196|gb|AAW27238.1| SJCHGC02859 protein [Schistosoma japonicum]
Length = 218
Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 120/204 (58%), Positives = 146/204 (71%), Gaps = 6/204 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF RD F+L+SK+TIGVEF T+ + I K +KAQIWDTAGQERYRA
Sbjct: 21 LIGDSGVGKSNLLSRFTRDTFNLESKSTIGVEFATRNVNIDGKVIKAQIWDTAGQERYRA 80
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+ QSF N+ WL+EL HA+KNI++MLVGNK DL LR+V
Sbjct: 81 ITSAYYRGAVGALLVYDVCVLQSFRNLEIWLKELNDHAEKNIVVMLVGNKCDLRHLRSVG 140
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA+ FA+++GL F+ETSAL+STNVE AF +L IY IVS N + + SL
Sbjct: 141 TEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQNIYSIVSSHPPVNNIDMK----MSL 196
Query: 181 LKATNIVVPGQEPESGRRSYNCCT 204
IV P + SG R CC
Sbjct: 197 HNNQPIVSPNADNASGGRR--CCN 218
>gi|297843374|ref|XP_002889568.1| hypothetical protein ARALYDRAFT_887774 [Arabidopsis lyrata subsp.
lyrata]
gi|297335410|gb|EFH65827.1| hypothetical protein ARALYDRAFT_887774 [Arabidopsis lyrata subsp.
lyrata]
Length = 218
Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 118/208 (56%), Positives = 156/208 (75%), Gaps = 8/208 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGKS LL+R+AR+EFS +SKATIGVEFQT+++ I K VKAQIWDTAGQER+RA
Sbjct: 17 VIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMAIEGKEVKAQIWDTAGQERFRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA++VYDIT+R +F++V RWL+EL+ H+D + MLVGNK DLE +RAV
Sbjct: 77 VTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDLENIRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESE--SGGSS 178
++ K AE EGL F+ETSAL+STNV+ AF V+ +IY VS+K L ++ + +
Sbjct: 137 VDEGKALAEAEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLNSDTYKDKLTVNRV 196
Query: 179 SLLKATNIVVPGQEPESGRRSYNCCTSS 206
SL+K N + SG ++CC+S+
Sbjct: 197 SLVKDDN---SASKQSSG---FSCCSST 218
>gi|255574657|ref|XP_002528238.1| protein with unknown function [Ricinus communis]
gi|223532355|gb|EEF34153.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 119/210 (56%), Positives = 151/210 (71%), Gaps = 12/210 (5%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LLARFARDEF +SK+TIGVEFQT+ + I+ K VKAQIWDTAGQER+RA
Sbjct: 19 LIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA+LVYDI++RQ+FD+V +WL EL H+D N++ +LVGNKSDL+ R V
Sbjct: 79 VTSAYYRGAVGALLVYDISRRQTFDSVGKWLNELHTHSDMNVVTILVGNKSDLKDAREVS 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T + K AE + L FMETSAL+S+NV AF TV+ EIY I+S+K ++ +E + +
Sbjct: 139 TAEGKALAETQDLFFMETSALDSSNVTAAFQTVVREIYNILSRKVMS--NEFNKQDAPLM 196
Query: 181 LKATNIVVPGQ-------EPESGRRSYNCC 203
+V+ G EP +G CC
Sbjct: 197 GNGKTVVLQGDGSQEAIAEPRNGG---GCC 223
>gi|291411545|ref|XP_002722062.1| PREDICTED: RAB11B, member RAS oncogene family-like [Oryctolagus
cuniculus]
Length = 234
Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 109/155 (70%), Positives = 132/155 (85%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 59 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 118
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 119 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 178
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLT 155
T++A+ FAEK L F+ETSAL+STNVE AF +LT
Sbjct: 179 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 213
>gi|225708476|gb|ACO10084.1| Ras-related protein Rab-25 [Osmerus mordax]
Length = 212
Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 116/203 (57%), Positives = 152/203 (74%), Gaps = 12/203 (5%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGKS LL+RFA++EF+ DS+ TIGVEF T+T+ ++ +KAQIWDTAG ERYRA
Sbjct: 19 LIGESGVGKSNLLSRFAKNEFNHDSRTTIGVEFSTRTVQLNGLTIKAQIWDTAGLERYRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+TK ++++V RWL+EL HAD ++++MLVGNKSDL + R+VP
Sbjct: 79 ITSAYYRGAVGALLVYDVTKHLTYESVERWLKELYDHADPHMVVMLVGNKSDLVSERSVP 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK+FAEK+GL F+ETSALESTNVE AF VL+EI+R VS K + GS S
Sbjct: 139 TEEAKDFAEKKGLLFLETSALESTNVEAAFNDVLSEIHRKVSSKKVIQ-------GSISA 191
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ + G P + + CC
Sbjct: 192 -----VSLAGHVPSNPEENKPCC 209
>gi|194387092|dbj|BAG59912.1| unnamed protein product [Homo sapiens]
Length = 179
Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 109/155 (70%), Positives = 132/155 (85%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLT 155
T++A+ FAEK L F+ETSAL+STNVE AF +LT
Sbjct: 136 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
>gi|17380746|gb|AAL36203.1| putative RAS-related protein ARA-1 [Arabidopsis thaliana]
Length = 218
Score = 232 bits (591), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 118/208 (56%), Positives = 157/208 (75%), Gaps = 8/208 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGKS LL+R+AR+EFS +SKATIGVEFQT+++ I K VKAQIWDTAGQER+RA
Sbjct: 17 VIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTAGQERFRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA++VYDIT+R +F++V RWL++L+ H+D + MLVGNK DLE +RAV
Sbjct: 77 VTSAYYRGAVGALVVYDITRRTTFESVGRWLDQLKIHSDTTVARMLVGNKCDLENIRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESE--SGGSS 178
E+ K AE+EGL F+ETSAL+STNV+ AF V+ +IY VS+K L ++ + +
Sbjct: 137 VEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLNSDTYKDELTVNRV 196
Query: 179 SLLKATNIVVPGQEPESGRRSYNCCTSS 206
SL+K N + SG ++CC+S+
Sbjct: 197 SLVKDDN---SASKQSSG---FSCCSST 218
>gi|359478027|ref|XP_002264559.2| PREDICTED: ras-related protein RABA5c-like isoform 2 [Vitis
vinifera]
Length = 302
Score = 232 bits (591), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 155/205 (75%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGKS LL+R+AR+EF+++SKATIGVEFQT+++ I K VKAQIWDTAGQER+RA
Sbjct: 102 IIGDSAVGKSNLLSRYARNEFNINSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRA 161
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA++VYDI++R +FD+VARWL+EL+ H++ + MLVGNKSDLE +R V
Sbjct: 162 VTSAYYRGAVGALVVYDISRRSTFDSVARWLDELKTHSETTVARMLVGNKSDLENIRDVS 221
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+ K AE EGL F+ETSAL+STNV+ AF V+ EIY +S+K L S+S +
Sbjct: 222 VEEGKSLAEAEGLFFIETSALDSTNVKKAFEIVIREIYNNISRKVLN----SDSYKAELS 277
Query: 181 LKATNIVVPGQE-PESGRRSYNCCT 204
+ ++V G + + Y+CC+
Sbjct: 278 VNRVSLVSNGADGAKQANSRYSCCS 302
>gi|444719050|gb|ELW59850.1| Ras-related protein Rab-25 [Tupaia chinensis]
Length = 213
Score = 231 bits (590), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 120/205 (58%), Positives = 150/205 (73%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EFS DS+ TIGVEF T+T+++ VKAQIWDTAG ERYRA
Sbjct: 17 LIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LV+D+TK Q++ V RWL+EL HA+ I++MLVGNKSDL R VP
Sbjct: 77 ITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+A+ FAE GL F+ETSAL+STNVELAF TVL EI+ VSK+ ++ S S+
Sbjct: 137 TEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ-----RQNSSRSSAIT 191
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
L + GQEP SG + CC S
Sbjct: 192 LGSAQ---AGQEPGSGEKR-TCCIS 212
>gi|226493760|ref|NP_001152371.1| ras-related protein ARA-4 [Zea mays]
gi|194698180|gb|ACF83174.1| unknown [Zea mays]
gi|195655655|gb|ACG47295.1| ras-related protein ARA-4 [Zea mays]
gi|414869586|tpg|DAA48143.1| TPA: hypothetical protein ZEAMMB73_561529 [Zea mays]
Length = 216
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 119/206 (57%), Positives = 145/206 (70%), Gaps = 10/206 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGKS LL+R+AR+EF+ SKATIGVEFQT+++ I K VKAQIWDTAGQER+RA
Sbjct: 18 IIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMAIEGKEVKAQIWDTAGQERFRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA GA+LVYDIT+R +FDNV RWL+EL H+D + MLVGNK DL +R VP
Sbjct: 78 VTSAYYRGAFGALLVYDITRRSTFDNVGRWLQELNTHSDTTVAKMLVGNKCDLGDIRQVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+ K AE EGL FMETSAL++TNV AF V+ EIY VS+K L S +
Sbjct: 138 VEEGKALAEAEGLFFMETSALDATNVRTAFEIVIREIYSNVSRKVLN------SDSYKAE 191
Query: 181 LKATNIVVPG---QEPESGRRSYNCC 203
L + + G E + G R + CC
Sbjct: 192 LSLNRVSIDGDSKDEQKQGSR-FGCC 216
>gi|363746030|ref|XP_003643501.1| PREDICTED: ras-related protein Rab-11A-like, partial [Gallus
gallus]
Length = 156
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 107/155 (69%), Positives = 132/155 (85%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + +K VKAQIWDTAGQERYRA
Sbjct: 2 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQERYRA 61
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++N RWL EL+ HAD NI+IMLVGNKSDL LRAVP
Sbjct: 62 ITSAYYRGAVGALLVYDIAKYLTYENAERWLAELQDHADANIVIMLVGNKSDLRHLRAVP 121
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLT 155
T++A+ FAE+ GL F+ETSAL+STNVE AF +L+
Sbjct: 122 TDEARSFAERNGLSFLETSALDSTNVETAFHNILS 156
>gi|452821640|gb|EME28668.1| Rab family, other [Galdieria sulphuraria]
Length = 217
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 146/205 (71%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHH-KNVKAQIWDTAGQERYR 59
L+GDS VGKS LL RF R+EF LDSK+TIGVEF TKT+ + K VKAQIWDTAGQERY+
Sbjct: 17 LVGDSGVGKSNLLWRFTRNEFHLDSKSTIGVEFATKTIHLEDGKVVKAQIWDTAGQERYK 76
Query: 60 AVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAV 119
A+T+AYYRGA GA+LVYDIT+R S +N+ RWL ELR H D +++MLVGNK DL LR V
Sbjct: 77 AITAAYYRGAFGALLVYDITQRASLENIPRWLRELREHVDNQMVVMLVGNKCDLRHLRQV 136
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSS 179
E K+ AE+EGL F+ETSAL+STNVE AF ++ EIYR++ KKAL +ES S +
Sbjct: 137 EIEQGKKLAEEEGLLFLETSALDSTNVEEAFTQLIREIYRLMKKKALV----NESTQSFA 192
Query: 180 LLKATNIVVPGQEPESGRRSYNCCT 204
L + +V+ + CCT
Sbjct: 193 LKQDNTVVIRDPSAAKSSKKKKCCT 217
>gi|94733749|emb|CAK11462.1| novel protein similar to vertebrate RAB25, member RAS oncogene
family (RAB25) [Danio rerio]
Length = 210
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 117/206 (56%), Positives = 152/206 (73%), Gaps = 10/206 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGKS LL+RF ++EF+ DS+ TIGVEF T+++ + +KAQIWDTAG ERYRA
Sbjct: 15 LIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDSITIKAQIWDTAGLERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITK ++++V RWL+EL HAD +I++MLVGNK+DL T+R VP
Sbjct: 75 ITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGNKNDLATVRTVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK+FA+ GL FMETSALESTNVE AFL VLT I++ V+ K +T GS S
Sbjct: 135 TEEAKDFADANGLLFMETSALESTNVESAFLEVLTAIHQKVASKEVTR-------GSISA 187
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
+ P +E + R +CC +S
Sbjct: 188 VTLGQTHGPSREFQESR---SCCKNS 210
>gi|403419077|emb|CCM05777.1| predicted protein [Fibroporia radiculosa]
Length = 237
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 120/229 (52%), Positives = 157/229 (68%), Gaps = 32/229 (13%)
Query: 1 LIGDSAVGKS-------------------------QLLARFARDEFSLDSKATIGVEFQT 35
LIGDS VGKS LL+RF R+EF+L++K+TIGVEF T
Sbjct: 15 LIGDSGVGKSCVPLRACLATSRLIKFILSFVSQHSNLLSRFTRNEFNLETKSTIGVEFAT 74
Query: 36 KTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELR 95
+++ + K +KAQIWDTAGQERYRA+T+AYYRGAVGA+LVYDI K ++ +V RWL+ELR
Sbjct: 75 RSITVDGKTLKAQIWDTAGQERYRAITAAYYRGAVGALLVYDIAKHGTYVDVTRWLKELR 134
Query: 96 GHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLT 155
HAD NI+IMLVGNKSDL+ LRAVPT++AK FA + GL F+ETSAL+++NVE AF T+LT
Sbjct: 135 DHADSNIVIMLVGNKSDLKHLRAVPTDEAKTFATENGLSFIETSALDASNVESAFQTILT 194
Query: 156 EIYRIVSKKAL-TANDESESGGSSSLLKATNIVVPGQEPESGRRSYNCC 203
+IYRIVS K+L ++D + S+ V P + + + S CC
Sbjct: 195 DIYRIVSSKSLEQSSDPIKPSSGDSI-----TVAPSVDSNTNQNS-KCC 237
>gi|297826611|ref|XP_002881188.1| hypothetical protein ARALYDRAFT_902201 [Arabidopsis lyrata subsp.
lyrata]
gi|297327027|gb|EFH57447.1| hypothetical protein ARALYDRAFT_902201 [Arabidopsis lyrata subsp.
lyrata]
Length = 219
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 121/209 (57%), Positives = 152/209 (72%), Gaps = 9/209 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGKS LL+R+AR+EF+ SKATIGVEFQT+ + I K VKAQIWDTAGQER+RA
Sbjct: 17 IIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVKAQIWDTAGQERFRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA++VYDI++R +F++V RWL+EL+ H+D + MLVGNK DLE++RAV
Sbjct: 77 VTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARMLVGNKCDLESIRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
E+ K AE EGL FMETSAL+STNV+ AF V+ +IY VS+K L T E
Sbjct: 137 VEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNVSRKQLNSDTYKTELSMKNR 196
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCCTSS 206
SL+K N G G ++CC+SS
Sbjct: 197 VSLVKDDN---KGSTQGFG---FSCCSSS 219
>gi|125601208|gb|EAZ40784.1| hypothetical protein OsJ_25262 [Oryza sativa Japonica Group]
Length = 246
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 111/166 (66%), Positives = 137/166 (82%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
L+GDS+VGKS LLARFAR+EF +SK+TIGVEFQT+ LVI K +KAQIWDTAGQER+RA
Sbjct: 19 LLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIKAQIWDTAGQERFRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA+LVYDI++RQ+FD+V RWL EL H+D N++ +LVGNK+DL+ R V
Sbjct: 79 VTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNVVTILVGNKTDLKHAREVS 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL 166
T + K AE +GL FMETSAL+S+NV AF TV+ EIY I+S+K L
Sbjct: 139 TAEGKALAESQGLFFMETSALDSSNVAEAFQTVVKEIYGILSRKDL 184
>gi|303730|dbj|BAA02108.1| GTP-binding protein [Pisum sativum]
gi|738933|prf||2001457A GTP-binding protein
Length = 215
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 112/169 (66%), Positives = 137/169 (81%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LL+RFAR+EF +SKATIGVEFQT+T+ I K VKAQIWDTAGQER+RA
Sbjct: 17 LIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQTVEIDGKEVKAQIWDTAGQERFRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA GA++VYDI++R +FD++ RWL+EL D + MLVGNK DLE+LR V
Sbjct: 77 VTSAYYRGAFGALVVYDISRRGTFDSIKRWLDELTTQNDSTVARMLVGNKCDLESLREVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAN 169
TE+ K FAE+EGL FMETSAL+STNV+ AF V+ EIY +S+K L ++
Sbjct: 137 TEEGKAFAEEEGLFFMETSALDSTNVQKAFEIVIREIYNNISRKVLNSD 185
>gi|117939039|dbj|BAF36673.1| Small G Protein RAB [Pyrsonympha grandis]
Length = 200
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/163 (65%), Positives = 136/163 (83%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL R+ ++EF+L+SK+TIGVEF T+++ +K +KAQIWDTAGQ+RYRA
Sbjct: 3 LIGDSGVGKSNLLLRYTKNEFNLESKSTIGVEFATRSIQFDNKTIKAQIWDTAGQDRYRA 62
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K +++NV +WL+ELR HAD +I+IMLVGNKSDL LR VP
Sbjct: 63 ITSAYYRGAVGALLVYDISKHATYENVDKWLKELRDHADPSIVIMLVGNKSDLRHLRNVP 122
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSK 163
TE+AK FA++ L F+ETSAL STNVE AF T+L EIY+ V +
Sbjct: 123 TEEAKNFAQRNNLSFIETSALHSTNVETAFHTILQEIYKNVVR 165
>gi|56693355|ref|NP_001008641.1| ras-related protein Rab-25 [Danio rerio]
gi|56270511|gb|AAH86715.1| RAB25, member RAS oncogene family [Danio rerio]
Length = 210
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 117/206 (56%), Positives = 151/206 (73%), Gaps = 10/206 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGKS LL+RF ++EF+ DS+ TIGVEF T+++ + +KAQIWDTAG ERYRA
Sbjct: 15 LIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDSITIKAQIWDTAGLERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITK ++++V RWL+EL HAD +I++MLVGNK+DL T+R VP
Sbjct: 75 ITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGNKNDLATVRTVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK+FA+ GL FMETSALESTNVE AFL VLT I++ V+ K +T GS S
Sbjct: 135 TEEAKDFADANGLLFMETSALESTNVESAFLEVLTAIHQKVASKEVTR-------GSISA 187
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
+ P +E + R CC +S
Sbjct: 188 VTLGQTHGPSREFQESR---GCCKNS 210
>gi|297663252|ref|XP_002810088.1| PREDICTED: ras-related protein Rab-25 [Pongo abelii]
Length = 213
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 120/205 (58%), Positives = 148/205 (72%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EFS DS+ TIGVEF T+T+++ VKAQIWDTAG ERYRA
Sbjct: 17 LIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LV+D+TK Q++ V RWL+EL HA+ I++MLVGNKSDL R VP
Sbjct: 77 ITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+A+ FAE GL F+ETSAL+STNVELAF TVL EI+ VSK+ S + +L
Sbjct: 137 TEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ----RQNSIRTNAITL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
A PGQEP G + CC S
Sbjct: 193 GSAQ----PGQEPGPGEKR-ACCIS 212
>gi|417397205|gb|JAA45636.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 212
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 149/205 (72%), Gaps = 10/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EFS DS+ TIGVEF T+T+++ VKAQIWDTAG ERYRA
Sbjct: 17 LIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LV+D+TK Q++ V RWL+EL HA+ I++MLVGNKSDL R VP
Sbjct: 77 ITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAE GL F+ETSAL+STNVELAF TVL EI+ VSK+ S + +L
Sbjct: 137 TDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ----RQNSTRTNAITL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
A GQEP G+R+ CC S
Sbjct: 193 SSAQ----AGQEPGPGKRA--CCIS 211
>gi|414873861|tpg|DAA52418.1| TPA: hypothetical protein ZEAMMB73_441203 [Zea mays]
Length = 234
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 117/213 (54%), Positives = 149/213 (69%), Gaps = 14/213 (6%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
L+GDS VGKS LL+RF R+ FSLDSK+TIGVEF T+T+ + K +KAQIWDTAGQERYRA
Sbjct: 24 LVGDSGVGKSNLLSRFTRNAFSLDSKSTIGVEFATRTIQVDGKTIKAQIWDTAGQERYRA 83
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHAD-KNIIIMLVGNKSDL------ 113
+TSAYYRGA GA+LVYD+T+ +F++ ARWL ELR HAD + +MLVGNK+DL
Sbjct: 84 ITSAYYRGAAGALLVYDVTRADTFESAARWLRELRDHADGRGAAVMLVGNKTDLARSGSR 143
Query: 114 ---ETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND 170
RAVP DA AE+EGL F+ETSAL++TNV+ AF T+LTEIYR VS+KAL A+
Sbjct: 144 SRHHHPRAVPRGDAAALAEREGLSFVETSALDATNVDAAFETLLTEIYRAVSRKALAASS 203
Query: 171 ESESGGSSSLLKATNIVVPGQEPESGRRSYNCC 203
+ G+ +A + +S + CC
Sbjct: 204 AGDDAGAVGEGQAIQV----SASDSAGLTTRCC 232
>gi|348579815|ref|XP_003475674.1| PREDICTED: ras-related protein Rab-25-like [Cavia porcellus]
Length = 213
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 151/205 (73%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EFS DS+ TIGVEF T+T+++ +KAQIWDTAG ERYRA
Sbjct: 17 LIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LV+D+TK Q++ V RWL+EL HA+ I++MLVGNKSDL R VP
Sbjct: 77 ITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAE GL F+ETSAL+STNVELAF TVL EI+ VSK+ ++ + ++
Sbjct: 137 TDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQR-----QNSTRTNTIT 191
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
L T PGQ+P SG + CC S
Sbjct: 192 LGDTQ---PGQDPSSGEKK-ACCIS 212
>gi|291397790|ref|XP_002715439.1| PREDICTED: RAB25, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 213
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/203 (58%), Positives = 148/203 (72%), Gaps = 9/203 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EFS DS+ TIGVEF T+T+++ VKAQIWDTAG ERYRA
Sbjct: 17 LIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKAQIWDTAGLERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LV+D+TK Q++ V RWL+EL HA+ I++MLVGNKSDL R VP
Sbjct: 77 ITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+A+ FAE GL F+ETSAL+STNVELAF TVL EI+ VSK+ N S + +L
Sbjct: 137 TEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ----NQNSPRSNAIAL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
A GQEP G++ CC
Sbjct: 193 GSAQ----AGQEPGPGQKR-ACC 210
>gi|15225121|ref|NP_180726.1| RAB GTPase-like protein A5D [Arabidopsis thaliana]
gi|75337278|sp|Q9SIP0.1|RAA5D_ARATH RecName: Full=Ras-related protein RABA5d; Short=AtRABA5d
gi|4582469|gb|AAD24853.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
gi|32815939|gb|AAP88354.1| At2g31680 [Arabidopsis thaliana]
gi|110743709|dbj|BAE99691.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
gi|330253478|gb|AEC08572.1| RAB GTPase-like protein A5D [Arabidopsis thaliana]
Length = 219
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 114/206 (55%), Positives = 152/206 (73%), Gaps = 3/206 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGKS LL+R+AR+EF+ SKATIGVEFQT+ + I K VKAQIWDTAGQER+RA
Sbjct: 17 IIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVKAQIWDTAGQERFRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA++VYDI++R +F++V RWL+EL+ H+D + MLVGNK DLE++RAV
Sbjct: 77 VTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARMLVGNKCDLESIRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+ K AE EGL FMETSAL+STNV+ AF V+ +IY +S+K L ++ S+
Sbjct: 137 VEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQLNSDTYKT---ELSM 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
++V + + ++CC+SS
Sbjct: 194 KNRVSLVKDDNKSSTQGFGFSCCSSS 219
>gi|357117593|ref|XP_003560549.1| PREDICTED: ras-related protein RABA3-like [Brachypodium distachyon]
Length = 233
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 114/190 (60%), Positives = 144/190 (75%), Gaps = 4/190 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDS VGK+QLL RF RDEF LDSK+TIG+EFQT+T+++ K VKAQIWDTAGQERYRA
Sbjct: 19 VIGDSGVGKTQLLGRFTRDEFCLDSKSTIGIEFQTRTVLLAGKRVKAQIWDTAGQERYRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETL---- 116
VTSAYYRGA+GAMLVYD+T+R SF++ ARW+ ELR HADK+I+++L+GNK+DL
Sbjct: 79 VTSAYYRGALGAMLVYDVTRRDSFEHAARWVAELRAHADKSIVVVLIGNKADLAVAAVGR 138
Query: 117 RAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGG 176
RAV E+A FAE++GL F E SAL NVE AFL +L EI+ VS++ L +D G
Sbjct: 139 RAVDVEEATAFAEEQGLFFYEASALSGDNVEAAFLGLLEEIHAAVSRRPLEVDDGGAGGD 198
Query: 177 SSSLLKATNI 186
+LK T +
Sbjct: 199 GELMLKGTRL 208
>gi|242045362|ref|XP_002460552.1| hypothetical protein SORBIDRAFT_02g030540 [Sorghum bicolor]
gi|241923929|gb|EER97073.1| hypothetical protein SORBIDRAFT_02g030540 [Sorghum bicolor]
Length = 256
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/168 (64%), Positives = 139/168 (82%), Gaps = 2/168 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
++GDSAVGK+QLLARF RDEF+LDSK+TIGVEFQT+TL +H K VKAQIWDTAGQERYRA
Sbjct: 38 VVGDSAVGKTQLLARFTRDEFALDSKSTIGVEFQTRTLTLHRKRVKAQIWDTAGQERYRA 97
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHAD-KNIIIMLVGNKSDLET-LRA 118
VTSAYYRGA+GAM+VYD+T+R +F++VARW+EELR HAD + ++ L+GNK+D+ R
Sbjct: 98 VTSAYYRGALGAMVVYDVTRRATFEHVARWVEELRAHADGSSTVVALIGNKADMPAGRRE 157
Query: 119 VPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL 166
V ++A AE++GL F E SAL NVE AFLT+L E++ +VS++AL
Sbjct: 158 VAADEAARLAEEQGLFFSEASALTGDNVERAFLTLLEEVFAVVSRRAL 205
>gi|194036023|ref|XP_001928392.1| PREDICTED: ras-related protein Rab-25 [Sus scrofa]
Length = 213
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 148/205 (72%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EFS DS+ TIGVEF T+T+++ VKAQIWDTAG ERYRA
Sbjct: 17 LIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LV+D+TK Q++ V RWL+EL HA+ I++MLVGNKSDL R VP
Sbjct: 77 ITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAE GL F+ETSAL+STNVELAF TVL EI+ VSK+ S + +L
Sbjct: 137 TDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ----RQNSSRTNAITL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
A PGQEP G + CC S
Sbjct: 193 GSAQ----PGQEPGPGEKR-ACCIS 212
>gi|296229146|ref|XP_002760046.1| PREDICTED: ras-related protein Rab-25 [Callithrix jacchus]
Length = 213
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 120/207 (57%), Positives = 148/207 (71%), Gaps = 13/207 (6%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EFS DS+ TIGVEF T+T+++ VKAQIWDTAG ERYRA
Sbjct: 17 LIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LV+D+TK Q++ V RWL+EL HA+ I++MLVGNKSDL R VP
Sbjct: 77 ITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL--TANDESESGGSS 178
TE+A+ FAE GL F+ETSAL+STNVELAF TVL EI+ VSK+ T + GG+
Sbjct: 137 TEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFEKVSKQRQNSTRTNAITLGGAQ 196
Query: 179 SLLKATNIVVPGQEPESGRRSYNCCTS 205
GQEP SG + CC S
Sbjct: 197 G----------GQEPGSGEKR-ACCIS 212
>gi|118376340|ref|XP_001021352.1| Ras family protein [Tetrahymena thermophila]
gi|89303119|gb|EAS01107.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777772|dbj|BAJ21282.1| Rab-family small GTPase Rab11A [Tetrahymena thermophila]
Length = 230
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 105/174 (60%), Positives = 142/174 (81%), Gaps = 1/174 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF +DEF+ D K TIGVEF T++++ +K +KAQIWDTAGQERY A
Sbjct: 16 LIGDSGVGKSNLLSRFTKDEFNQDQKTTIGVEFATRSIMADNKLIKAQIWDTAGQERYVA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+L+YDITK SF N+ +WL+E+R HA+ +I++MLVGNKSDL+ LR V
Sbjct: 76 ITSAYYRGAVGALLIYDITKHSSFINIQKWLDEIRDHAEPHIVVMLVGNKSDLKHLRQVR 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTA-NDESE 173
EDA FAEK + F+ETSAL+++NVEL F ++TEIY++++K+++ N+ES+
Sbjct: 136 QEDATAFAEKNNIAFIETSALDASNVELTFQRIITEIYQLLNKRSMVPENNESQ 189
>gi|226507848|ref|NP_001151959.1| ras-related protein Rab11A [Zea mays]
gi|195651361|gb|ACG45148.1| ras-related protein Rab11A [Zea mays]
gi|223945145|gb|ACN26656.1| unknown [Zea mays]
gi|414886383|tpg|DAA62397.1| TPA: Ras protein Rab11A [Zea mays]
Length = 248
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 115/206 (55%), Positives = 147/206 (71%), Gaps = 9/206 (4%)
Query: 9 KSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRG 68
K+QLLARFARDEF+LDSK TIGVEFQT+TL +H K VK QIWDTAGQERYRAVTSAYYRG
Sbjct: 43 KTQLLARFARDEFALDSKPTIGVEFQTRTLTLHRKRVKTQIWDTAGQERYRAVTSAYYRG 102
Query: 69 AVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETL-RAVPTEDAKEF 127
A+GAM+VYD+T+R +F++VARW+EELR HAD + ++ L+GNK+D+ R VP ++A
Sbjct: 103 ALGAMVVYDVTRRATFEHVARWVEELRAHADGSTVVALIGNKADMPAARREVPADEAARL 162
Query: 128 AEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAN-------DESESGGSSSL 180
AE +GL F E SAL NVE AFLT+L E++ VS++AL + D+ + GG
Sbjct: 163 AEDQGLFFSEASALTGDNVERAFLTLLEEVFAAVSRRALELDEARRMRGDQGDGGGEVLS 222
Query: 181 LKATNIVVPG-QEPESGRRSYNCCTS 205
LK T + V E + +RS C S
Sbjct: 223 LKGTAVDVGSIMETSAMKRSSQCACS 248
>gi|56758728|gb|AAW27504.1| SJCHGC09130 protein [Schistosoma japonicum]
Length = 228
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 111/169 (65%), Positives = 133/169 (78%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF RD F L+SK+TIGVEF T+ + I K +KAQIWDTAGQERYRA
Sbjct: 32 LIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEFATRNVNIDGKVIKAQIWDTAGQERYRA 91
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYD+ K QSF N+ WL ELR HA+KNI++MLVGNK DL LR V
Sbjct: 92 ITSAYYRGAVGALVVYDVCKLQSFHNLTSWLNELRDHAEKNIVMMLVGNKCDLRHLRNVG 151
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAN 169
TEDA+ FA+++GL F+ETSAL+STNVE AF +L +IY IVS N
Sbjct: 152 TEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQDIYSIVSSHPPVNN 200
>gi|281342890|gb|EFB18474.1| hypothetical protein PANDA_016684 [Ailuropoda melanoleuca]
Length = 199
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 148/205 (72%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EFS DS+ TIGVEF T+T+++ VKAQIWDTAG ERYRA
Sbjct: 3 LIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRA 62
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LV+D+TK Q++ V RWL+EL HA+ I++MLVGNKSDL+ R VP
Sbjct: 63 ITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLQQAREVP 122
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+A+ FAE GL F+ETSAL+STNVELAF TVL EI+ VSK+ S + +L
Sbjct: 123 TEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFTKVSKQ----RQNSSRTNAITL 178
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
A GQEP G + CC S
Sbjct: 179 GSAQ----AGQEPGPGEKR-ACCIS 198
>gi|367013768|ref|XP_003681384.1| hypothetical protein TDEL_0D05890 [Torulaspora delbrueckii]
gi|359749044|emb|CCE92173.1| hypothetical protein TDEL_0D05890 [Torulaspora delbrueckii]
Length = 229
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 111/203 (54%), Positives = 150/203 (73%), Gaps = 3/203 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++F+++SK+TIGVEF T+T+ + K +KAQIWDTAGQERYRA
Sbjct: 30 LIGDSGVGKSNLLSRFTTNDFNMESKSTIGVEFATRTIEVEGKKIKAQIWDTAGQERYRA 89
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI+K S++N WL ELR +AD N+ + L+GNKSDL+ LRAVP
Sbjct: 90 ITSAYYRGAVGALIVYDISKPSSYENCNHWLTELRENADDNVAVGLIGNKSDLDHLRAVP 149
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FA++ L F ETSAL+S NVELAF ++T IY++VSK + D +SG +++
Sbjct: 150 TDEARNFAQENQLLFTETSALKSENVELAFRELITAIYQMVSKHQV---DLGDSGNNNAP 206
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
T + P + S NCC
Sbjct: 207 KGPTISLTPAPNEHKKKSSGNCC 229
>gi|449463200|ref|XP_004149322.1| PREDICTED: ras-related protein RABA5e-like [Cucumis sativus]
gi|449507589|ref|XP_004163075.1| PREDICTED: ras-related protein RABA5e-like [Cucumis sativus]
Length = 215
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 118/204 (57%), Positives = 145/204 (71%), Gaps = 7/204 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LL+RFAR+EF +SKATIGVEFQT+ + I K VKAQIWDTAGQER+RA
Sbjct: 18 LIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVKAQIWDTAGQERFRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA++VYDIT+R +FD+ RWL+EL H D + MLVGNK DLE +R V
Sbjct: 78 VTSAYYRGAVGALIVYDITRRTTFDSAKRWLDELGVHCDTATVRMLVGNKCDLENIRDVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+ K AE+EGL FMETSAL+STNV AF V+ EIY VS+K L ++ S
Sbjct: 138 VEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIREIYNNVSRKVLNSD-------SYKA 190
Query: 181 LKATNIVVPGQEPESGRRSYNCCT 204
+ N V S ++ ++CC+
Sbjct: 191 ELSENRVSLADGGASSKKGFSCCS 214
>gi|256053122|ref|XP_002570055.1| rab11 [Schistosoma mansoni]
gi|350645028|emb|CCD60258.1| rab11, putative [Schistosoma mansoni]
Length = 933
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 109/169 (64%), Positives = 135/169 (79%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
L GDS VGKS LL+RF R+EF+L+SK+TIGVEF TK++ I + +KAQIWDTAGQERYRA
Sbjct: 21 LTGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVEIDGRTIKAQIWDTAGQERYRA 80
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T+AYYRGAVGA+LVYDITKR++F+N+ WL ELRGHA+ +I+IMLVGNK DL LR +
Sbjct: 81 ITAAYYRGAVGALLVYDITKRETFNNLEHWLLELRGHAEPDIVIMLVGNKCDLRHLRTIL 140
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAN 169
TEDAK +AE+ GL FMETSALEST VE AF ++L I+ V +N
Sbjct: 141 TEDAKLWAERHGLFFMETSALESTGVENAFYSILRTIFEAVRSHPPASN 189
>gi|301783133|ref|XP_002926982.1| PREDICTED: ras-related protein Rab-25-like [Ailuropoda melanoleuca]
Length = 213
Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 148/205 (72%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EFS DS+ TIGVEF T+T+++ VKAQIWDTAG ERYRA
Sbjct: 17 LIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LV+D+TK Q++ V RWL+EL HA+ I++MLVGNKSDL+ R VP
Sbjct: 77 ITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLQQAREVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+A+ FAE GL F+ETSAL+STNVELAF TVL EI+ VSK+ S + +L
Sbjct: 137 TEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFTKVSKQ----RQNSSRTNAITL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
A GQEP G + CC S
Sbjct: 193 GSAQ----AGQEPGPGEKR-ACCIS 212
>gi|187609401|pdb|3CPJ|B Chain B, Crystal Structure Of Ypt31 In Complex With Yeast Rab-Gdi
Length = 223
Score = 229 bits (583), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 114/206 (55%), Positives = 145/206 (70%), Gaps = 3/206 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EF++DSK+TIGVEF T+TL I K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKRIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI+K S++N WL ELR +AD N+ + L+GNKSDL LRAVP
Sbjct: 78 ITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKSDLAHLRAVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESG---GS 177
TE++K FA++ L F ETSAL S NV+ AF ++ IY+ VSK + D S +G G+
Sbjct: 138 TEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDSSANGNANGA 197
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCC 203
S+ T + P NCC
Sbjct: 198 SAPNGPTISLTPTPNENKKANGNNCC 223
>gi|345802588|ref|XP_547540.3| PREDICTED: ras-related protein Rab-25 [Canis lupus familiaris]
gi|334350816|sp|E2RQ15.1|RAB25_CANFA RecName: Full=Ras-related protein Rab-25; Flags: Precursor
Length = 213
Score = 229 bits (583), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 118/205 (57%), Positives = 149/205 (72%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EFS DS+ TIGVEF T+T+++ +KAQIWDTAG ERYRA
Sbjct: 17 LIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LV+D+TK Q++ V RWL+EL HA+ I++MLVGNKSDL R VP
Sbjct: 77 ITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLHQAREVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+A+ FAE GL F+ETSAL+STNVELAF TVL EI+ VSK+ S + +L
Sbjct: 137 TEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFTKVSKQ----RQNSTRTNAIAL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
A GQEP +G++ CC S
Sbjct: 193 GSAQ----AGQEPGAGQKR-ACCIS 212
>gi|224069898|ref|XP_002303077.1| predicted protein [Populus trichocarpa]
gi|222844803|gb|EEE82350.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 229 bits (583), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 147/205 (71%), Gaps = 6/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGKS LL+RFAR+EF +SKATIGVEFQT+ + I K +KAQIWDTAGQER+RA
Sbjct: 20 VIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQVVDIDGKEIKAQIWDTAGQERFRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA++VYDIT+R SFD+V RWL+EL H D I MLVGNK DL+++R V
Sbjct: 80 VTSAYYRGAVGALIVYDITRRTSFDSVKRWLDELGTHCDTAIARMLVGNKCDLDSIREVS 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
++ K AE+E L FMETSAL+STNVE AF V+ EIY +S+K L S +
Sbjct: 140 RDEGKSLAEEESLFFMETSALDSTNVEAAFEVVIREIYNNMSRKILN------SDSYKAE 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
L A + + + S + ++CC +
Sbjct: 194 LTANRVSLVNGDTSSKKYGFSCCNT 218
>gi|6320869|ref|NP_010948.1| Ypt31p [Saccharomyces cerevisiae S288c]
gi|586807|sp|P38555.3|YPT31_YEAST RecName: Full=GTP-binding protein YPT31/YPT8; AltName: Full=Rab
GTPase YPT31
gi|425713|gb|AAA83385.1| GTPase-activating protein [Saccharomyces cerevisiae]
gi|603623|gb|AAB64564.1| Ypt31p [Saccharomyces cerevisiae]
gi|927541|emb|CAA51354.1| Ypt31p [Saccharomyces cerevisiae]
gi|151944741|gb|EDN63000.1| GTPase [Saccharomyces cerevisiae YJM789]
gi|207346004|gb|EDZ72632.1| YER031Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271138|gb|EEU06231.1| Ypt31p [Saccharomyces cerevisiae JAY291]
gi|259145939|emb|CAY79199.1| Ypt31p [Saccharomyces cerevisiae EC1118]
gi|285811656|tpg|DAA07684.1| TPA: Ypt31p [Saccharomyces cerevisiae S288c]
gi|323305223|gb|EGA58970.1| Ypt31p [Saccharomyces cerevisiae FostersB]
gi|323309378|gb|EGA62595.1| Ypt31p [Saccharomyces cerevisiae FostersO]
gi|323333919|gb|EGA75308.1| Ypt31p [Saccharomyces cerevisiae AWRI796]
gi|323337933|gb|EGA79172.1| Ypt31p [Saccharomyces cerevisiae Vin13]
gi|323348967|gb|EGA83203.1| Ypt31p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355434|gb|EGA87258.1| Ypt31p [Saccharomyces cerevisiae VL3]
gi|349577689|dbj|GAA22857.1| K7_Ypt31p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365766056|gb|EHN07557.1| Ypt31p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299721|gb|EIW10813.1| Ypt31p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 223
Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 114/206 (55%), Positives = 145/206 (70%), Gaps = 3/206 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EF++DSK+TIGVEF T+TL I K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI+K S++N WL ELR +AD N+ + L+GNKSDL LRAVP
Sbjct: 78 ITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKSDLAHLRAVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESG---GS 177
TE++K FA++ L F ETSAL S NV+ AF ++ IY+ VSK + D S +G G+
Sbjct: 138 TEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDSSANGNANGA 197
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCC 203
S+ T + P NCC
Sbjct: 198 SAPNGPTISLTPTPNENKKANGNNCC 223
>gi|432910564|ref|XP_004078416.1| PREDICTED: ras-related protein Rab-25-like [Oryzias latipes]
Length = 208
Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 107/164 (65%), Positives = 139/164 (84%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGKS LL+RF ++EFS DS+ TIGVEF T+T+ ++ +KAQIWDTAG ERYRA
Sbjct: 15 LIGESGVGKSNLLSRFTKNEFSHDSRTTIGVEFSTRTVQLNSFTIKAQIWDTAGLERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITK ++++V RWL+EL HAD+++++MLVGNK+DLE+ R+VP
Sbjct: 75 ITSAYYRGAVGALLVYDITKHLTYESVERWLKELLDHADQHMVVMLVGNKTDLESERSVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKK 164
+E+AK+FA+K GL F+ETSALESTNVE AF VL EI+R VS +
Sbjct: 135 SEEAKDFADKNGLMFLETSALESTNVEAAFNGVLAEIHRKVSSR 178
>gi|401839461|gb|EJT42683.1| YPT31-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 223
Score = 229 bits (583), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 114/206 (55%), Positives = 145/206 (70%), Gaps = 3/206 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EF++DSK+TIGVEF T+TL I K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI+K S++N WL ELR +AD N+ + L+GNKSDL LRAVP
Sbjct: 78 ITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKSDLAHLRAVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESG---GS 177
TE++K FA++ L F ETSAL S NV+ AF ++ IY+ VSK + D S +G G+
Sbjct: 138 TEESKTFAQENQLLFTETSALNSENVDEAFEELINTIYQKVSKHQMDLGDSSTNGNVNGA 197
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCC 203
S+ T + P NCC
Sbjct: 198 SAPNGPTISLTPTPNENKNGSGNNCC 223
>gi|255717675|ref|XP_002555118.1| KLTH0G01760p [Lachancea thermotolerans]
gi|238936502|emb|CAR24681.1| KLTH0G01760p [Lachancea thermotolerans CBS 6340]
Length = 218
Score = 228 bits (582), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 110/203 (54%), Positives = 148/203 (72%), Gaps = 2/203 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF +EF+++SK+TIGVEF T+T+ + K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTTNEFNMESKSTIGVEFATRTIEVEGKKIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI+K S++N WL ELR +AD+N+ + L+GNKSDL LRAVP
Sbjct: 78 ITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADENVAVGLIGNKSDLAHLRAVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK FA++ L F ETSAL S NV+ AF ++T IY++VSK + N+ + G +
Sbjct: 138 TDEAKNFAQENQLLFTETSALNSENVDQAFRELITAIYQMVSKHQVDLNEYGNNAGQAP- 196
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
K I + + ++S NCC
Sbjct: 197 -KGPTISLTPAPAKKNKKSDNCC 218
>gi|145342495|ref|XP_001416217.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576442|gb|ABO94510.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 202
Score = 228 bits (582), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 106/163 (65%), Positives = 132/163 (80%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
L+GDS VGKS LL+RF R+EF L+SK+TIGVEF T+T+ + +K +KAQIWDTAGQERYRA
Sbjct: 17 LVGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIELQNKIIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T ++DN+ +WL ELR HAD +I+IMLVGNK DLE LR
Sbjct: 77 ITSAYYRGAVGALLVYDVTSGDTYDNIEKWLSELRDHADASIVIMLVGNKCDLEHLRVTE 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSK 163
A++FAEKEGL F+ETSAL +TNVE AF+ L +Y +VSK
Sbjct: 137 AATAQQFAEKEGLMFIETSALNATNVEHAFIDSLGRVYDVVSK 179
>gi|254567101|ref|XP_002490661.1| GTPase of the Ypt/Rab family, very similar to Ypt31p [Komagataella
pastoris GS115]
gi|238030457|emb|CAY68381.1| GTPase of the Ypt/Rab family, very similar to Ypt31p [Komagataella
pastoris GS115]
gi|328351047|emb|CCA37447.1| GTP-binding protein YPT32/YPT11 [Komagataella pastoris CBS 7435]
Length = 220
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 111/203 (54%), Positives = 144/203 (70%), Gaps = 2/203 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
L+G+S+VGKS LL+RF RDEF+++SK TIGVEF T+T+ + K +KAQIWDTAGQERYRA
Sbjct: 20 LVGESSVGKSNLLSRFTRDEFNIESKTTIGVEFATRTIEVDGKRIKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VT+AYYRGAVGA+LVYDI+ S++ +RWL EL+ HAD NI++ LVGNKSDL LRAVP
Sbjct: 80 VTAAYYRGAVGALLVYDISNSSSYEGASRWLSELKDHADANIVVELVGNKSDLNHLRAVP 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK FA ++GL F E SAL S NVELAF ++ IY +VSK ND + +
Sbjct: 140 TDEAKSFATEKGLLFTEASALNSENVELAFQQLIKAIYDMVSKHQFDMNDYGND--NKPI 197
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
I + +S + +CC
Sbjct: 198 TGGQTITLTPTPKDSKIKKDSCC 220
>gi|117939085|dbj|BAF36696.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 200
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 109/174 (62%), Positives = 140/174 (80%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL R+ ++EF+L+SK+TIGVEF TK++ +K +KAQIWDTAGQ+RYRA
Sbjct: 3 LIGDSGVGKSNLLLRYTKNEFNLESKSTIGVEFATKSIQFDNKTIKAQIWDTAGQDRYRA 62
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSA YRGAVGA+LVYDI+K +++NV +WL+ELR AD +I+IMLVGNKSDL LR VP
Sbjct: 63 VTSACYRGAVGALLVYDISKHTTYENVDKWLKELRDQADPSIVIMLVGNKSDLRHLRNVP 122
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESES 174
TE+AK FA++ L F+ETSA +STNVE AF T+L EIY+ V + + D+S+S
Sbjct: 123 TEEAKSFAQRNNLSFIETSASQSTNVESAFNTILQEIYKNVVRNTGVSGDDSKS 176
>gi|190405593|gb|EDV08860.1| GTP-binding protein YPT31/YPT8 [Saccharomyces cerevisiae RM11-1a]
Length = 223
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 114/206 (55%), Positives = 144/206 (69%), Gaps = 3/206 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EF++DSK+TIGVEF T+TL I K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI+K S++N WL ELR AD N+ + L+GNKSDL LRAVP
Sbjct: 78 ITSAYYRGAVGALIVYDISKSSSYENCNHWLSELREKADDNVAVGLIGNKSDLAHLRAVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESG---GS 177
TE++K FA++ L F ETSAL S NV+ AF ++ IY+ VSK + D S +G G+
Sbjct: 138 TEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDSSANGNANGA 197
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCC 203
S+ T + P NCC
Sbjct: 198 SAPNGPTISLTPTPNENKKANGNNCC 223
>gi|384493128|gb|EIE83619.1| GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 116/209 (55%), Positives = 154/209 (73%), Gaps = 16/209 (7%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGK+ LL RF R+EF+L+SK+TIGVEF T+++ + +K +KAQIWDT Y
Sbjct: 13 LIGDSGVGKTNLLGRFTRNEFNLESKSTIGVEFATRSIQVDNKVIKAQIWDTG---NYFI 69
Query: 61 VTS-----AYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLET 115
TS +YYRGAVGA+L YDI+K +F++V+RWL+ELR HAD NI+IMLVGNKSDL
Sbjct: 70 STSYTLNISYYRGAVGALLCYDISKHSTFESVSRWLKELRDHADSNIVIMLVGNKSDLRH 129
Query: 116 LRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL-TANDESES 174
LRAVPT++AK+FA + GL F+ETSAL++TNVEL+F +LTEI+RIVS KAL T+N+ +
Sbjct: 130 LRAVPTDEAKQFASENGLSFIETSALDATNVELSFQRILTEIHRIVSNKALETSNNAIKP 189
Query: 175 GGSSSLLKATNIVVPGQEPESGRRSYNCC 203
G ++L + Q P+ + S CC
Sbjct: 190 TGGQTILVS-------QSPDEPKPSGGCC 211
>gi|410986758|ref|XP_003999676.1| PREDICTED: ras-related protein Rab-25 [Felis catus]
Length = 213
Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 118/207 (57%), Positives = 148/207 (71%), Gaps = 13/207 (6%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EFS DS+ TIGVEF T+T+++ +KAQIWDTAG ERYRA
Sbjct: 17 LIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LV+D+TK Q++ V RWL+EL HA+ I++MLVGNKSDL R VP
Sbjct: 77 ITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL--TANDESESGGSS 178
TE+A+ FAE GL F+ETSAL+STNVELAF TVL EI+ VSK+ T + GG+
Sbjct: 137 TEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNSTRTNAITLGGAQ 196
Query: 179 SLLKATNIVVPGQEPESGRRSYNCCTS 205
+ GQEP G + CC S
Sbjct: 197 A----------GQEPGPGEKR-ACCIS 212
>gi|393238684|gb|EJD46220.1| ras-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 213
Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/205 (53%), Positives = 155/205 (75%), Gaps = 7/205 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
++GDS VGK+ +L+RF R+EFS+DSK+TIGV+F TK + + +K VKAQ+WDTAGQ+RYRA
Sbjct: 15 IVGDSGVGKTNMLSRFTRNEFSIDSKSTIGVDFATKYINVDNKVVKAQLWDTAGQDRYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T+AYYRGAVGA+LVYDIT+R ++DN+ RWL+ELR AD N +IMLVGNKSDL+ +RAV
Sbjct: 75 ITAAYYRGAVGALLVYDITRRGTYDNLLRWLKELRDFADTNAVIMLVGNKSDLKHIRAVS 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALT-ANDESESGGSSS 179
TE+A F+ + GL F+ETSAL+S+NV+ AF TV+ +I++IVS + L + +E + G+ +
Sbjct: 135 TEEAAAFSAEHGLSFLETSALDSSNVDEAFNTVVNDIFKIVSAQQLERSENEVSAPGAGA 194
Query: 180 LLKATNIVVPGQEPESGRRSYNCCT 204
+K N E+ CC+
Sbjct: 195 PIKIDN------STETQTTKGGCCS 213
>gi|403293753|ref|XP_003937876.1| PREDICTED: ras-related protein Rab-25 [Saimiri boliviensis
boliviensis]
Length = 213
Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 147/205 (71%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EFS DS+ TIGVEF T+T+++ VKAQIWDTAG ERYRA
Sbjct: 17 LIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LV+D+TK ++ V RWL+EL HA+ I++MLVGNKSDL R VP
Sbjct: 77 ITSAYYRGAVGALLVFDLTKHHTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+A+ FAE GL F+ETSAL+STNVELAF TVL EI+ VSK+ S + +L
Sbjct: 137 TEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFEKVSKQ----RQNSTRTNAITL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
A GQEP SG + CC S
Sbjct: 193 GSAQG----GQEPGSGEKR-ACCIS 212
>gi|182890006|gb|AAI65926.1| Rab25 protein [Danio rerio]
Length = 210
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/206 (56%), Positives = 150/206 (72%), Gaps = 10/206 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGKS LL+RF ++EF+ DS+ TIGVEF T+++ + +KAQIWDTAG ERYRA
Sbjct: 15 LIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDSITIKAQIWDTAGLERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITK ++++V RWL+EL HAD +I++MLVGNK+DL T+R VP
Sbjct: 75 ITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGNKNDLATVRTVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK+FA+ L FMETSALESTNVE AFL VLT I++ V+ K +T GS S
Sbjct: 135 TEEAKDFADANDLLFMETSALESTNVESAFLEVLTAIHQKVASKEVTR-------GSISA 187
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
+ P +E + R CC +S
Sbjct: 188 VTLGQTHGPSREFQESR---GCCKNS 210
>gi|149751384|ref|XP_001499799.1| PREDICTED: ras-related protein Rab-25-like [Equus caballus]
Length = 213
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 147/205 (71%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EFS DS+ TIGVEF T+T+++ VKAQIWDTAG ERYRA
Sbjct: 17 LIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LV+D+TK Q++ V RWL+EL HA+ I++MLVGNKSDL R VP
Sbjct: 77 ITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+A+ FAE GL F+ETSAL+STNVELAF TVL EI+ VSK+ S + +L
Sbjct: 137 TEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ----RQNSTRTNAITL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
A GQEP G + CC S
Sbjct: 193 GSAQ----AGQEPGPGEKR-ACCIS 212
>gi|1172845|sp|P46629.1|RAB25_RABIT RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|436001|gb|AAA31261.1| small GTP-binding protein, partial [Oryctolagus cuniculus]
Length = 213
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/203 (58%), Positives = 147/203 (72%), Gaps = 9/203 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EFS DS+ TIGVEF T+T+++ VKAQIWDTAG ERYRA
Sbjct: 17 LIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKAQIWDTAGLERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LV+D+TK Q++ V RWL+EL HA+ I++MLVGNKSDL R VP
Sbjct: 77 ITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+A+ FAE GL F+ETSAL+STNVELAF TVL EI+ VSK+ S + +L
Sbjct: 137 TEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQI----QNSPRSNAIAL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
A GQEP G++ CC
Sbjct: 193 GSAQ----AGQEPGPGQKR-ACC 210
>gi|294943805|ref|XP_002783965.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239896947|gb|EER15761.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 228
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 109/164 (66%), Positives = 134/164 (81%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R EF+L+S++TIGVEF TK++ I K VKAQIWDTAGQERYRA
Sbjct: 20 LIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGSKVVKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+KR SF+N ARWL+ELR HAD +I++MLVGNK DL LRAV
Sbjct: 80 ITSAYYRGAVGALLVYDISKRSSFENAARWLKELREHADSDIVVMLVGNKCDLSHLRAVE 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKK 164
++AK+F L F+ETSALE+TNVE AF +L +IY++ S K
Sbjct: 140 EDEAKKFCTDNDLLFIETSALEATNVEEAFQEILEDIYKVNSSK 183
>gi|254583127|ref|XP_002499295.1| ZYRO0E08492p [Zygosaccharomyces rouxii]
gi|238942869|emb|CAR31040.1| ZYRO0E08492p [Zygosaccharomyces rouxii]
Length = 218
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 109/203 (53%), Positives = 147/203 (72%), Gaps = 2/203 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++F+++SK+TIGVEF T+T+ + K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTTNDFNMESKSTIGVEFATRTIEVEGKKIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI+K S++N WL ELR +AD N+ + L+GNKSDL+ LRAVP
Sbjct: 78 ITSAYYRGAVGALIVYDISKPSSYENCNHWLTELRENADDNVAVGLIGNKSDLDHLRAVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK FA++ L F ETSAL+S NV+LAF ++T IY++VSK + D + G +
Sbjct: 138 TDEAKNFAQENQLLFTETSALKSENVDLAFRELITAIYQMVSKHQVDLGDANTQGNAPK- 196
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
T + P + + NCC
Sbjct: 197 -GPTISLTPAPNENKKKSANNCC 218
>gi|294874898|ref|XP_002767142.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239868591|gb|EEQ99859.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 228
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 109/164 (66%), Positives = 134/164 (81%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R EF+L+S++TIGVEF TK++ I K VKAQIWDTAGQERYRA
Sbjct: 20 LIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGSKVVKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+KR SF+N ARWL+ELR HAD +I++MLVGNK DL LRAV
Sbjct: 80 ITSAYYRGAVGALLVYDISKRSSFENAARWLKELREHADSDIVVMLVGNKCDLSHLRAVE 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKK 164
++AK+F L F+ETSALE+TNVE AF +L +IY++ S K
Sbjct: 140 EDEAKKFCTDNDLLFIETSALEATNVEEAFQEILEDIYKVNSSK 183
>gi|225467903|ref|XP_002263362.1| PREDICTED: ras-related protein RABA5e-like [Vitis vinifera]
gi|147834571|emb|CAN69655.1| hypothetical protein VITISV_000615 [Vitis vinifera]
gi|296080913|emb|CBI18743.3| unnamed protein product [Vitis vinifera]
Length = 215
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 148/205 (72%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGKS LL+R+AR+EF L SKATIGVEFQT+ + I K VKAQIWDTAGQER+RA
Sbjct: 14 IIGDSAVGKSNLLSRYARNEFDLHSKATIGVEFQTQCVDIDGKEVKAQIWDTAGQERFRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA GA+LVYDI++R +F+++ARWL+EL+ H D + MLVGNK DLE +R V
Sbjct: 74 VTSAYYRGAFGALLVYDISRRSTFESIARWLDELKIHCDTTVARMLVGNKCDLENIRDVS 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+ K AE EGL FMETSAL++TNV+ AF V+ EI+ VS+K L S+S +
Sbjct: 134 TEEGKNLAEAEGLFFMETSALDATNVKTAFEMVIREIFNNVSRKVL----HSDSYKAELS 189
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ ++V G + Y+ C S
Sbjct: 190 VNRVSLVNNGAAASKQNQIYSSCCS 214
>gi|281210631|gb|EFA84797.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 221
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/204 (56%), Positives = 148/204 (72%), Gaps = 5/204 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L++K+TIGVEF T+T+V K +KAQIWDTAGQERYRA
Sbjct: 19 LIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRTIVTEGKTIKAQIWDTAGQERYRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKN--IIIMLVGNKSDLETLRA 118
+TSAYYRGAVGA+LVYDI K+ ++ +V RWL ELR +AD+N I IMLVGNKSDL LR
Sbjct: 79 ITSAYYRGAVGALLVYDIAKQATYKSVERWLTELRENADRNFDIEIMLVGNKSDLRHLRE 138
Query: 119 VPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSS 178
V T++AKEFAEK L F+ETSAL+S+NV++AF T+LT+I +S+ S
Sbjct: 139 VSTDEAKEFAEKHKLLFIETSALDSSNVDVAFQTILTQICHSMSRPTPIGAPSGHDDNSP 198
Query: 179 SLLKATNIVVPGQEPESGRRSYNC 202
S+ +I ++P G NC
Sbjct: 199 SIGTPVDISSDTKKPNQGN---NC 219
>gi|21634443|gb|AAM69362.1|AF274025_1 GTP-binding protein Rab25 [Homo sapiens]
Length = 217
Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 147/205 (71%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EFS DS+ TIGVEF T+T+++ VKAQIWDTAG ERYRA
Sbjct: 21 LIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRA 80
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LV+D+TK Q++ V RWL+EL HA+ I++MLVGNKSDL R VP
Sbjct: 81 ITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVP 140
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+A+ FAE GL F+ETSAL+STNVELAF TVL EI+ VSK+ S + +L
Sbjct: 141 TEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ----RQNSIRTNAITL 196
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
A GQEP G + CC S
Sbjct: 197 GSAQ----AGQEPGPGEKR-ACCIS 216
>gi|116812567|ref|NP_065120.2| ras-related protein Rab-25 [Homo sapiens]
gi|109017309|ref|XP_001116371.1| PREDICTED: ras-related protein Rab-25 isoform 2 [Macaca mulatta]
gi|114560206|ref|XP_001163533.1| PREDICTED: ras-related protein Rab-25 isoform 1 [Pan troglodytes]
gi|332220700|ref|XP_003259492.1| PREDICTED: ras-related protein Rab-25 [Nomascus leucogenys]
gi|397500869|ref|XP_003821127.1| PREDICTED: ras-related protein Rab-25 [Pan paniscus]
gi|402856560|ref|XP_003892855.1| PREDICTED: ras-related protein Rab-25 isoform 1 [Papio anubis]
gi|402856562|ref|XP_003892856.1| PREDICTED: ras-related protein Rab-25 isoform 2 [Papio anubis]
gi|426332033|ref|XP_004026997.1| PREDICTED: ras-related protein Rab-25 [Gorilla gorilla gorilla]
gi|46577696|sp|P57735.2|RAB25_HUMAN RecName: Full=Ras-related protein Rab-25; AltName: Full=CATX-8;
Flags: Precursor
gi|14602627|gb|AAH09831.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|23273871|gb|AAH33322.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|119573388|gb|EAW53003.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|190689945|gb|ACE86747.1| RAB25, member RAS oncogene family protein [synthetic construct]
gi|190691317|gb|ACE87433.1| RAB25, member RAS oncogene family protein [synthetic construct]
gi|261858756|dbj|BAI45900.1| RAB25, member RAS oncogene family [synthetic construct]
gi|312153252|gb|ADQ33138.1| RAB25, member RAS oncogene family [synthetic construct]
gi|355558553|gb|EHH15333.1| hypothetical protein EGK_01407 [Macaca mulatta]
gi|355745732|gb|EHH50357.1| hypothetical protein EGM_01173 [Macaca fascicularis]
Length = 213
Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 147/205 (71%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EFS DS+ TIGVEF T+T+++ VKAQIWDTAG ERYRA
Sbjct: 17 LIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LV+D+TK Q++ V RWL+EL HA+ I++MLVGNKSDL R VP
Sbjct: 77 ITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+A+ FAE GL F+ETSAL+STNVELAF TVL EI+ VSK+ S + +L
Sbjct: 137 TEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ----RQNSIRTNAITL 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
A GQEP G + CC S
Sbjct: 193 GSAQ----AGQEPGPGEKR-ACCIS 212
>gi|226443180|ref|NP_001140072.1| ras-related protein Rab-25 [Salmo salar]
gi|221221692|gb|ACM09507.1| Ras-related protein Rab-25 [Salmo salar]
Length = 211
Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/203 (56%), Positives = 149/203 (73%), Gaps = 9/203 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGKS LL+RF ++EF+ DS+ TIGVEF T+T+ + +KAQIWDTAG ERYRA
Sbjct: 15 LIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTIQLKSLIIKAQIWDTAGLERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITK ++++V RWL+EL HAD +I++MLVGNK+DL + R+VP
Sbjct: 75 ITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGNKTDLGSERSVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+AK+FAEK GL F+ETSALESTNVE AF VL EI+R VS K + G S++
Sbjct: 135 NEEAKDFAEKNGLLFLETSALESTNVETAFQNVLGEIHRKVSSKKVL------RGSISAV 188
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
A+ + +PE + CC
Sbjct: 189 SLASPVPRAAGDPEEKK---PCC 208
>gi|351705520|gb|EHB08439.1| Ras-related protein Rab-11A, partial [Heterocephalus glaber]
Length = 207
Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/205 (55%), Positives = 148/205 (72%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG S G+S LL+RF R+EF+LDSK+T G++F T+++ + K +KAQIWDTAGQER RA
Sbjct: 7 LIGHSGAGESNLLSRFIRNEFNLDSKSTSGIQFATRSIQVDGKTIKAQIWDTAGQERCRA 66
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
TSAYYR A+GA+LV+DI K +++NV RWL+E R HAD NI+IMLV NKSDL LRAVP
Sbjct: 67 TTSAYYREALGALLVFDIAKHLTYENVERWLKEPRDHADSNIVIMLVRNKSDLCHLRAVP 126
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAEK GL F+E+SAL TNVE AF T+LTEIYR VS+K ++ E++ SS++
Sbjct: 127 TDEARAFAEKNGLPFIESSALHWTNVEAAFQTILTEIYRTVSQKQISDRRENDMSPSSNM 186
Query: 181 LKATNIVVPGQEPES--GRRSYNCC 203
VP P + + CC
Sbjct: 187 -------VPIHVPPTTESKPKMQCC 204
>gi|225678958|gb|EEH17242.1| GTP-binding protein yptV1 [Paracoccidioides brasiliensis Pb03]
Length = 222
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 116/203 (57%), Positives = 145/203 (71%), Gaps = 10/203 (4%)
Query: 5 SAVGKSQLLA----RFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
S + SQ++ RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 26 STIHTSQIILPMKYRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 85
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD TK+Q+F N RWL+ELR HADKNI+IMLVGNK D + +R V
Sbjct: 86 ITSAYYRGAVGALLVYDTTKKQTFANCERWLKELREHADKNIVIMLVGNKIDEKHMRDVK 145
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T DA EFA++ L F+ETSAL++TNVELAF +LTEIYRIVS KAL E+G SS
Sbjct: 146 TSDAVEFADEMKLSFIETSALDATNVELAFQNILTEIYRIVSSKAL------ENGSSSQS 199
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
V+ + + CC
Sbjct: 200 PLGDRKVIEISKTQDADAKQKCC 222
>gi|50285709|ref|XP_445283.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524587|emb|CAG58189.1| unnamed protein product [Candida glabrata]
Length = 218
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 111/203 (54%), Positives = 146/203 (71%), Gaps = 2/203 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF +EF++DSK+TIGVEF T+T+ + K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTTNEFNIDSKSTIGVEFATRTIDVDGKKIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI+K S++N WL ELR +AD N+ + L+GNKSDL LRAVP
Sbjct: 78 ITSAYYRGAVGALIVYDISKSSSYENCHHWLSELRENADDNVAVGLIGNKSDLAHLRAVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK+FA + L F ETSAL S NV+LAF ++T I++ VSK + ++ ++ G +
Sbjct: 138 TEEAKQFASENQLLFTETSALNSDNVDLAFKELITAIHQKVSKHQVELSNANKPGAGPN- 196
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
T + P + S NCC
Sbjct: 197 -GPTISLTPAPNEKKKSSSNNCC 218
>gi|56758178|gb|AAW27229.1| SJCHGC05511 protein [Schistosoma japonicum]
gi|226466852|emb|CAX69561.1| Ras-related protein Rab-11A [Schistosoma japonicum]
Length = 213
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 117/207 (56%), Positives = 150/207 (72%), Gaps = 12/207 (5%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGK+ L +RF EF+L+SK+TIGV+F TK +VI K VKAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKTNLRSRFTNQEFNLESKSTIGVDFATKNVVIDGKVVKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K +F N+ RWL+ELR +A +++IMLVGNK DL+ LR V
Sbjct: 76 ITSAYYRGAVGALLVYDISKPDTFLNLDRWLDELREYASDDVVIMLVGNKCDLKHLRCVL 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAK FAE++G+ FMETSAL + NVE AF L IY +VSK+ DE ++
Sbjct: 136 TEDAKLFAEQQGMSFMETSALNAFNVEEAFCQTLKTIYNVVSKRPSFNADE------GNI 189
Query: 181 LKATNIVVPGQEP---ESGRRSYNCCT 204
+ N+ P +EP E+ ++ + CCT
Sbjct: 190 IPTNNL--PVEEPNLKETTKKKF-CCT 213
>gi|359806412|ref|NP_001240985.1| ras-related protein RABA5b-like [Glycine max]
gi|345651732|gb|AEO14876.1| rfls8 protein [Glycine max]
Length = 213
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 108/169 (63%), Positives = 135/169 (79%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LL+RFAR+EF +SKATIGVEFQT+ + I K +KAQIWDTAGQER+RA
Sbjct: 17 LIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQLVEIDGKEIKAQIWDTAGQERFRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA++VYDI++R +FD++ RWL+EL D + MLVGNK DLE +R V
Sbjct: 77 VTSAYYRGAVGALVVYDISRRGTFDSIKRWLQELTTQNDSTVARMLVGNKCDLENIREVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAN 169
TE+ K AE+EGL FMETSAL++TNV+ AF V+ EIY +S+K L ++
Sbjct: 137 TEEGKSLAEEEGLFFMETSALDATNVQTAFEIVIREIYNNISRKVLNSD 185
>gi|289370|gb|AAA68983.1| small GTP-binding protein [Brassica napus]
Length = 219
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 107/169 (63%), Positives = 138/169 (81%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGKS LL+R+AR+EF+ SKATIGVEFQT+++ I K+VKAQIWDTAGQER+RA
Sbjct: 17 IIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQSMEIEGKDVKAQIWDTAGQERFRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA++VYDI++R +F++VARWL+EL+ H+D + MLVGNK DL+ +RAV
Sbjct: 77 VTSAYYRGAVGALVVYDISRRSTFESVARWLDELKTHSDTTVARMLVGNKCDLDNMRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAN 169
E+ K AE +GL FMETSAL STNV+ AF V+ +IY S+K L ++
Sbjct: 137 VEEGKALAETQGLFFMETSALNSTNVKTAFEMVIRDIYANFSRKQLNSD 185
>gi|117939087|dbj|BAF36697.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 198
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 112/176 (63%), Positives = 138/176 (78%), Gaps = 2/176 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL R+ + EF+L+SK+TIGVEF TKT+ +KN+KAQIWDTAGQ+RYRA
Sbjct: 3 LIGDSGVGKSNLLLRYTKIEFNLESKSTIGVEFATKTIQYDNKNIKAQIWDTAGQDRYRA 62
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA+LVYD++K +++ V +WL+ELR AD I+IMLVGNKSDL LR VP
Sbjct: 63 VTSAYYRGAVGALLVYDVSKHSTYEGVDKWLKELRDQADPAIVIMLVGNKSDLRHLRNVP 122
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGG 176
TE+AK FA++ L F+ETSA STNVE AF T+L EIY+ V + TA E +S G
Sbjct: 123 TEEAKSFAQRNNLSFIETSAQSSTNVEAAFNTILQEIYKNVVRN--TAPAEVDSKG 176
>gi|156838761|ref|XP_001643080.1| hypothetical protein Kpol_423p12 [Vanderwaltozyma polyspora DSM
70294]
gi|156113672|gb|EDO15222.1| hypothetical protein Kpol_423p12 [Vanderwaltozyma polyspora DSM
70294]
Length = 220
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 109/203 (53%), Positives = 146/203 (71%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF DEF L+SK+TIGVEF T+T+ + K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTTDEFHLESKSTIGVEFATRTIDVDGKKIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI+K+ S++N WL ELR +AD N+ + L+GNKSDL LRAVP
Sbjct: 78 ITSAYYRGAVGALIVYDISKQSSYENCNHWLAELRENADDNVAVGLIGNKSDLSHLRAVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK+FA++ L F ETSAL S NV+ AF ++T IY+++SK + ++ + ++
Sbjct: 138 TDEAKKFAQENQLLFTETSALNSENVDQAFRELITSIYQMISKHQVDLGVDNNNNTLNAP 197
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
T + P + S NCC
Sbjct: 198 KGPTISLTPAPNEKKKSSSNNCC 220
>gi|297833530|ref|XP_002884647.1| hypothetical protein ARALYDRAFT_896904 [Arabidopsis lyrata subsp.
lyrata]
gi|297330487|gb|EFH60906.1| hypothetical protein ARALYDRAFT_896904 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 116/204 (56%), Positives = 148/204 (72%), Gaps = 4/204 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LL+RF+RDEF +SKATIGVEFQT+ + I K VKAQIWDTAGQER+RA
Sbjct: 17 LIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKAQIWDTAGQERFRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA GA++VYDIT+ +F++V RWL+EL H D + MLVGNK DLE +RAV
Sbjct: 77 VTSAYYRGAFGALIVYDITRSDTFESVKRWLQELNTHCDTAVAQMLVGNKCDLEDIRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+ K AE+EGL FMETSAL++TNV+ AF V+ EI+ VS+K L S++ +
Sbjct: 137 VEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRKLLN----SDAYKAELS 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCT 204
+ ++V ES R+ +CC+
Sbjct: 193 VNRVSLVNNQDGSESSWRNPSCCS 216
>gi|346465357|gb|AEO32523.1| hypothetical protein [Amblyomma maculatum]
Length = 168
Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 106/150 (70%), Positives = 126/150 (84%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EFSL+SK+TIGVEF T++L + K +KAQIWDTAGQERYRA
Sbjct: 19 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDAKVLKAQIWDTAGQERYRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+R +F+N RWL ELR H D NI++ML+GNKSDL L AV
Sbjct: 79 ITSAYYRGAVGALLVYDVTRRSTFENAERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVS 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAF 150
T+D K FAE+E L FMETSALE+TNVE AF
Sbjct: 139 TDDGKAFAERESLYFMETSALEATNVENAF 168
>gi|395845171|ref|XP_003795316.1| PREDICTED: ras-related protein Rab-25 [Otolemur garnettii]
Length = 213
Score = 226 bits (575), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 118/206 (57%), Positives = 148/206 (71%), Gaps = 11/206 (5%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EFS DS+ TIGVEF T+T+++ +KAQIWDTAG ERYRA
Sbjct: 17 LIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LV+D+TK Q++ V RWL+EL HA+ I++MLVGNKSDL R VP
Sbjct: 77 ITSAYYRGAVGALLVFDLTKHQTYSVVERWLKELYDHAEATIVVMLVGNKSDLSRAREVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSK-KALTANDESESGGSSS 179
TE+A+ FAE GL F+ETSAL+STNVELAF TVL EI+ VSK + +A + S GS+
Sbjct: 137 TEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNSARTNAISLGSAQ 196
Query: 180 LLKATNIVVPGQEPESGRRSYNCCTS 205
GQE G + CC S
Sbjct: 197 ---------AGQEAGPGEKR-ACCIS 212
>gi|126307642|ref|XP_001367187.1| PREDICTED: ras-related protein Rab-25-like [Monodelphis domestica]
Length = 213
Score = 226 bits (575), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 149/205 (72%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EFS DS+ TIGVEF T+T+++ VKAQIWDTAG ERYRA
Sbjct: 17 LIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKAQIWDTAGLERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LV+D+TK Q++ V RWL+EL HA+ I++MLVGNKSDL R VP
Sbjct: 77 ITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAE GL F+ETSAL+STNVELAF TVL EI+ VSK + ++ ++
Sbjct: 137 TDEARMFAENNGLLFIETSALDSTNVELAFETVLKEIFTKVSK-------QRQNNSRANA 189
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ +N PGQE S R CC S
Sbjct: 190 VTLSN-AQPGQELGSVERK-ACCIS 212
>gi|6321228|ref|NP_011305.1| Ypt32p [Saccharomyces cerevisiae S288c]
gi|1730881|sp|P51996.3|YPT32_YEAST RecName: Full=GTP-binding protein YPT32/YPT11; AltName: Full=Rab
GTPase YPT32
gi|927543|emb|CAA51355.1| Ypt32p [Saccharomyces cerevisiae]
gi|1322850|emb|CAA96926.1| YPT32 [Saccharomyces cerevisiae]
gi|1655723|gb|AAC49495.1| ras-like GTPase [Saccharomyces cerevisiae]
gi|45270902|gb|AAS56832.1| YGL210W [Saccharomyces cerevisiae]
gi|151943607|gb|EDN61917.1| GTPase [Saccharomyces cerevisiae YJM789]
gi|190407147|gb|EDV10414.1| GTP-binding protein YPT32/YPT11 [Saccharomyces cerevisiae RM11-1a]
gi|256269382|gb|EEU04680.1| Ypt32p [Saccharomyces cerevisiae JAY291]
gi|285812006|tpg|DAA07906.1| TPA: Ypt32p [Saccharomyces cerevisiae S288c]
gi|323305067|gb|EGA58820.1| Ypt32p [Saccharomyces cerevisiae FostersB]
gi|323333611|gb|EGA75004.1| Ypt32p [Saccharomyces cerevisiae AWRI796]
gi|323337752|gb|EGA78996.1| Ypt32p [Saccharomyces cerevisiae Vin13]
gi|323355135|gb|EGA86964.1| Ypt32p [Saccharomyces cerevisiae VL3]
gi|349578025|dbj|GAA23191.1| K7_Ypt32p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765748|gb|EHN07254.1| Ypt32p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299532|gb|EIW10626.1| Ypt32p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 222
Score = 226 bits (575), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 113/208 (54%), Positives = 150/208 (72%), Gaps = 8/208 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF DEF+++SK+TIGVEF T+T+ + +K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI+K S++N WL ELR +AD N+ + L+GNKSDL LRAVP
Sbjct: 78 ITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDLAHLRAVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESG----G 176
T++AK FA + + F ETSAL S NV+ AF ++ I+++VSK + D S SG G
Sbjct: 138 TDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSKHQV---DLSGSGTNNMG 194
Query: 177 SSSLLKATNI-VVPGQEPESGRRSYNCC 203
S+ K I + P + + ++S NCC
Sbjct: 195 SNGAPKGPTISLTPAPKEDKKKKSSNCC 222
>gi|31980838|ref|NP_058595.2| ras-related protein Rab-25 [Mus musculus]
gi|46397889|sp|Q9WTL2.2|RAB25_MOUSE RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|12833818|dbj|BAB22676.1| unnamed protein product [Mus musculus]
gi|13879300|gb|AAH06624.1| RAB25, member RAS oncogene family [Mus musculus]
gi|112293009|dbj|BAF02882.1| Rab25 [Mus musculus]
gi|148683327|gb|EDL15274.1| RAB25, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 213
Score = 226 bits (575), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 147/205 (71%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EFS DS+ TIGVEF T+T+++ VKAQIWDTAG ERYRA
Sbjct: 17 LIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LV+D+TK Q++ V RWL+EL HA+ I++MLVGNKSDL R VP
Sbjct: 77 ITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+A FAE GL F+ETSAL+STNVELAF TVL EI+ VSK + ++ +S
Sbjct: 137 TEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSK-------QKQNSTRTSA 189
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ N GQ+P G + CC S
Sbjct: 190 ITLGN-AQAGQDPGPGEKR-ACCIS 212
>gi|414873860|tpg|DAA52417.1| TPA: hypothetical protein ZEAMMB73_173009 [Zea mays]
Length = 234
Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 136/176 (77%), Gaps = 10/176 (5%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
L+GDS VGKS LL+RF R+ FSLDSK+TIGVEF T+T+ + K +KAQIWDTAGQERYRA
Sbjct: 24 LVGDSGVGKSNLLSRFTRNAFSLDSKSTIGVEFATRTIQVDGKTIKAQIWDTAGQERYRA 83
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHAD-KNIIIMLVGNKSDL------ 113
+TSAYYRGA GA+LVYD+T+ +F++ ARWL ELR HAD + +MLVGNK+DL
Sbjct: 84 ITSAYYRGAAGALLVYDVTRADTFESAARWLRELRDHADGRGAAVMLVGNKTDLARSGSR 143
Query: 114 ---ETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL 166
RAVP DA AE+EGL F+ETSAL++TNV+ AF T+LTEIYR VS+KAL
Sbjct: 144 SRHHHPRAVPRGDAAALAEREGLSFVETSALDATNVDAAFETLLTEIYRAVSRKAL 199
>gi|148683326|gb|EDL15273.1| RAB25, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 235
Score = 225 bits (574), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 147/205 (71%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EFS DS+ TIGVEF T+T+++ VKAQIWDTAG ERYRA
Sbjct: 39 LIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRA 98
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LV+D+TK Q++ V RWL+EL HA+ I++MLVGNKSDL R VP
Sbjct: 99 ITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVP 158
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+A FAE GL F+ETSAL+STNVELAF TVL EI+ VSK + ++ +S
Sbjct: 159 TEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSK-------QKQNSTRTSA 211
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ N GQ+P G + CC S
Sbjct: 212 ITLGN-AQAGQDPGPGEKR-ACCIS 234
>gi|302309967|ref|XP_451560.2| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|199424819|emb|CAH01953.2| KLLA0B00671p [Kluyveromyces lactis]
Length = 219
Score = 225 bits (573), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 148/204 (72%), Gaps = 3/204 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF +EF+LDSK TIGVEF T+T+ + K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTANEFNLDSKTTIGVEFATRTIEVEGKKIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T+AYYR AVGA++VYDITK S++N WL EL+ +AD+N+ + L+GNKSDL+ RAVP
Sbjct: 78 ITTAYYRAAVGALIVYDITKSSSYENCNHWLAELKQNADENVAVGLIGNKSDLDHKRAVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ +A++ L F ETSAL + NV+ AF ++T IY+++SK L ND SG +++
Sbjct: 138 TDEARNYAQENQLLFTETSALNADNVDEAFRALITAIYQMISKNQLDLND--ASGNNANA 195
Query: 181 LKATNI-VVPGQEPESGRRSYNCC 203
K I + P + + + NCC
Sbjct: 196 PKGPTISLTPAPNEKHKKSTNNCC 219
>gi|15231462|ref|NP_187397.1| RAB GTPase-like protein A5B [Arabidopsis thaliana]
gi|75337573|sp|Q9SRS5.1|RAA5B_ARATH RecName: Full=Ras-related protein RABA5b; Short=AtRABA5b
gi|6041856|gb|AAF02165.1|AC009853_25 putative GTP-binding protein [Arabidopsis thaliana]
gi|18253019|gb|AAL62436.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|25084141|gb|AAN72184.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|332641018|gb|AEE74539.1| RAB GTPase-like protein A5B [Arabidopsis thaliana]
Length = 217
Score = 225 bits (573), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 116/204 (56%), Positives = 148/204 (72%), Gaps = 4/204 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LL+RF+RDEF +SKATIGVEFQT+ + I K VKAQIWDTAGQER+RA
Sbjct: 17 LIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKAQIWDTAGQERFRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA GA++VYDIT+ +F++V RWL+EL H D + MLVGNK DLE +RAV
Sbjct: 77 VTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVAQMLVGNKCDLEDIRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+ K AE+EGL FMETSAL++TNV+ AF V+ EI+ VS+K L S++ +
Sbjct: 137 VEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRKLLN----SDAYKAELS 192
Query: 181 LKATNIVVPGQEPESGRRSYNCCT 204
+ ++V ES R+ +CC+
Sbjct: 193 VNRVSLVNNQDGSESSWRNPSCCS 216
>gi|401625852|gb|EJS43840.1| ypt32p [Saccharomyces arboricola H-6]
Length = 222
Score = 225 bits (573), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 110/205 (53%), Positives = 149/205 (72%), Gaps = 2/205 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF DEF+++SK+TIGVEF T+T+ + +K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI+K S++N WL ELR +AD N+ + L+GNKSDL LRAVP
Sbjct: 78 ITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDLAHLRAVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDE-SESGGSSS 179
T++A+ FA + + F ETSAL S NV+ AF ++ I+++VSK + N S + GS+
Sbjct: 138 TDEARNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSKHQVDLNGSGSNNVGSNG 197
Query: 180 LLKATNI-VVPGQEPESGRRSYNCC 203
K I + P + + ++S NCC
Sbjct: 198 GPKGPTISLTPAPKEDKKKKSSNCC 222
>gi|365761030|gb|EHN02706.1| Ypt31p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 223
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 114/206 (55%), Positives = 145/206 (70%), Gaps = 3/206 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EF++DSK+TIGVEF T+TL I K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI+K S++N WL ELR +AD N+ + L+GNKSDL LRAVP
Sbjct: 78 ITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKSDLAHLRAVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESG---GS 177
TE++K FA++ L F ETSAL S NV+ AF ++ IY+ VSK + D S +G G+
Sbjct: 138 TEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDSSTNGNVNGA 197
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCC 203
S+ T + P NCC
Sbjct: 198 SAPNGPTISLTPTPNENKNGGGNNCC 223
>gi|5106984|gb|AAD39911.1|AF119675_1 small GTP-binding protein RAB25 [Mus musculus]
gi|5106986|gb|AAD39912.1|AF119676_1 small GTP-binding protein RAB25 [Mus musculus]
Length = 213
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 147/205 (71%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EFS DS+ TIGVEF T+T+++ VKAQIWDTAG ERYRA
Sbjct: 17 LIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LV+D+TK Q++ V RWL+EL HA+ I++MLVGNKSDL R VP
Sbjct: 77 ITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+A FAE GL F+ETSAL+STNVELAF TVL EI+ VSK + ++ +S
Sbjct: 137 TEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSK-------QKQNSTRTSA 189
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
+ N GQ+P G + CC S
Sbjct: 190 ITLGN-AQAGQDPGLGEKR-ACCIS 212
>gi|156360721|ref|XP_001625174.1| predicted protein [Nematostella vectensis]
gi|156211993|gb|EDO33074.1| predicted protein [Nematostella vectensis]
Length = 219
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 112/207 (54%), Positives = 152/207 (73%), Gaps = 9/207 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF ++SK+TIGVEF T+++ + K +KAQ+WDTAGQERYRA
Sbjct: 17 LIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+TK+++F +V RWL E+R HAD I++MLVGNK DL+ LRAV
Sbjct: 77 ITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHADPTIVVMLVGNKCDLKHLRAVA 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIV---SKKALTANDESESGGS 177
++DAK++ ++ GL F+E SAL++TNVE AF +T+++ + KK L D E G
Sbjct: 137 SDDAKKYGDEHGLAFIEASALDATNVEEAFQQTITKLHHVQLAKMKKELDGKDTRE--GQ 194
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCCT 204
++ K N V +P G+ NCCT
Sbjct: 195 TAASKQQN-SVDLNKPSQGK---NCCT 217
>gi|256071416|ref|XP_002572036.1| rab11 [Schistosoma mansoni]
gi|350645030|emb|CCD60260.1| rab11, putative [Schistosoma mansoni]
Length = 218
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 148/205 (72%), Gaps = 8/205 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF TK++ I + +KAQIWDTAGQERYRA
Sbjct: 21 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVEIDGRTIKAQIWDTAGQERYRA 80
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T+AYYRGAVGA+LVYDITKR++F+N+ WL ELR + + ++++MLVGNK DL LR V
Sbjct: 81 ITAAYYRGAVGALLVYDITKRETFNNLEHWLLELRNNVELDMVVMLVGNKCDLRHLRTVQ 140
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDAK +AE+ GL FMETSALEST VE AF +L I+ V +N + + S
Sbjct: 141 TEDAKLWAERHGLFFMETSALESTGVENAFYYILKTIFEAVRSHPPVSNVDMK----MSP 196
Query: 181 LKATNIVVPGQE-PESGRRSYNCCT 204
IV P + +SGRR CC+
Sbjct: 197 YNNQPIVSPNTDSSKSGRR---CCS 218
>gi|259146304|emb|CAY79561.1| Ypt32p [Saccharomyces cerevisiae EC1118]
Length = 222
Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 112/208 (53%), Positives = 150/208 (72%), Gaps = 8/208 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF DEF+++SK+TIGVEF T+T+ + +K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI+K S++N WL ELR +AD N+ + L+GNKSDL LRAVP
Sbjct: 78 ITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDLAHLRAVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESG----G 176
T++AK FA + + F +TSAL S NV+ AF ++ I+++VSK + D S SG G
Sbjct: 138 TDEAKNFAMENQMLFTDTSALNSDNVDKAFRELIVAIFQMVSKHQV---DLSGSGTNNMG 194
Query: 177 SSSLLKATNI-VVPGQEPESGRRSYNCC 203
S+ K I + P + + ++S NCC
Sbjct: 195 SNGAPKGPTISLTPAPKEDKKKKSSNCC 222
>gi|308476613|ref|XP_003100522.1| CRE-RAB-11.2 protein [Caenorhabditis remanei]
gi|308264778|gb|EFP08731.1| CRE-RAB-11.2 protein [Caenorhabditis remanei]
Length = 345
Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 112/196 (57%), Positives = 148/196 (75%), Gaps = 6/196 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R++F L++K+TIGVEF T++++I K +KA IWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNQFDLETKSTIGVEFATRSMMIEGKKIKATIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHAD-KNIIIMLVGNKSDLETLRAV 119
+TSAYYRG +GA++VYDI K Q+F+N+ RWL+ELR HAD ++I IMLVGNK+DL LRAV
Sbjct: 77 ITSAYYRGTLGALVVYDIAKHQTFENIERWLKELRNHADQQDISIMLVGNKTDLRHLRAV 136
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSS 179
PT++A FAE+ + F+ETSAL+STNVE A +LT IY+ VS K N++ GG +
Sbjct: 137 PTDEAAVFAERNQMSFIETSALDSTNVEEALRNLLTAIYKSVSTK-YGVNEKPVYGGLGT 195
Query: 180 LLKATNIVVPGQEPES 195
++ + VP E S
Sbjct: 196 VMPS----VPTTEQNS 207
>gi|405944797|pdb|3TSO|A Chain A, Structure Of The Cancer Associated Rab25 Protein In
Complex With Fip2
gi|405944798|pdb|3TSO|B Chain B, Structure Of The Cancer Associated Rab25 Protein In
Complex With Fip2
Length = 178
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/164 (65%), Positives = 133/164 (81%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EFS DS+ TIGVEF T+T+++ VKAQIWDTAG ERYRA
Sbjct: 15 LIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LV+D+TK Q++ V RWL+EL HA+ I++MLVGNKSDL R VP
Sbjct: 75 ITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKK 164
TE+A+ FAE GL F+ETSAL+STNVELAF TVL EI+ VSK+
Sbjct: 135 TEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 178
>gi|221505687|gb|EEE31332.1| Rab 11 protein, putative [Toxoplasma gondii VEG]
Length = 193
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/162 (66%), Positives = 134/162 (82%), Gaps = 1/162 (0%)
Query: 12 LLARFARDEFSLDSKATIGVEFQTKTLVIHH-KNVKAQIWDTAGQERYRAVTSAYYRGAV 70
+L+RF RDEF+L+SK+TIGVEF TK++ + K +KAQIWDTAGQERYRA+TSAYYRGAV
Sbjct: 1 MLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQIWDTAGQERYRAITSAYYRGAV 60
Query: 71 GAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEK 130
GA+LVYDITKRQSF+NV RWL+ELR HAD NI+I+LVGNKSDL+ LRAV E+A +FA +
Sbjct: 61 GALLVYDITKRQSFENVERWLKELRDHADPNIVILLVGNKSDLKHLRAVSVEEATKFANR 120
Query: 131 EGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDES 172
E L F+ETSAL++TNVE AF +L EIY + KK + N +S
Sbjct: 121 EHLAFIETSALDATNVEQAFHQILAEIYLLRQKKQIEDNPQS 162
>gi|82793187|ref|XP_727942.1| small GTPase Rab11 [Plasmodium yoelii yoelii 17XNL]
gi|23484033|gb|EAA19507.1| small GTPase rab11-related [Plasmodium yoelii yoelii]
Length = 172
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/156 (67%), Positives = 133/156 (85%), Gaps = 1/156 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHH-KNVKAQIWDTAGQERYR 59
LIGDS VGKS LL+RF RDEF+L+SK+TIGVEF TK++ + + K +KAQIWDTAGQERYR
Sbjct: 16 LIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNDKIIKAQIWDTAGQERYR 75
Query: 60 AVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAV 119
A+TSAYYRGAVGA+LVYDITK+ +F+N+ +WL+ELR +AD NI+I+LVGNKSDL+ LR +
Sbjct: 76 AITSAYYRGAVGALLVYDITKKNTFENIEKWLKELRDNADSNIVILLVGNKSDLKHLRVI 135
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLT 155
DA +FA+KE L F+ETSALE+TNVELAF +L
Sbjct: 136 NDNDATQFAKKEKLAFIETSALEATNVELAFHQLLN 171
>gi|126031605|pdb|2OIL|A Chain A, Crystal Structure Of Human Rab25 In Complex With Gdp
Length = 193
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/164 (65%), Positives = 133/164 (81%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EFS DS+ TIGVEF T+T+++ VKAQIWDTAG ERYRA
Sbjct: 30 LIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRA 89
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LV+D+TK Q++ V RWL+EL HA+ I++MLVGNKSDL R VP
Sbjct: 90 ITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVP 149
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKK 164
TE+A+ FAE GL F+ETSAL+STNVELAF TVL EI+ VSK+
Sbjct: 150 TEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 193
>gi|395532154|ref|XP_003768136.1| PREDICTED: ras-related protein Rab-25 [Sarcophilus harrisii]
Length = 213
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/206 (57%), Positives = 148/206 (71%), Gaps = 11/206 (5%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EFS DS+ TIGVEF T+T+++ VKAQIWDTAG ERYRA
Sbjct: 17 LIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKAQIWDTAGLERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LV+D+TK Q++ V RWL+EL HA+ I++MLVGNKSDL R VP
Sbjct: 77 ITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSHAREVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSK-KALTANDESESGGSSS 179
T++A+ FAE GL F+ETSAL+STNVELAF TVL EI+ VSK + A + + GS+
Sbjct: 137 TDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFTKVSKQRQNNARANAITLGSAQ 196
Query: 180 LLKATNIVVPGQEPESGRRSYNCCTS 205
PGQE S + CC S
Sbjct: 197 ---------PGQELGSEEKK-ACCIS 212
>gi|444318297|ref|XP_004179806.1| hypothetical protein TBLA_0C04910 [Tetrapisispora blattae CBS 6284]
gi|387512847|emb|CCH60287.1| hypothetical protein TBLA_0C04910 [Tetrapisispora blattae CBS 6284]
Length = 231
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/163 (63%), Positives = 135/163 (82%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF +EF+L+SK+TIGVEF T+T+ + K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATRTIEVEGKKIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI+K S++N WL ELRG+AD N+ + L+GNKSDL+ +RAVP
Sbjct: 78 ITSAYYRGAVGALIVYDISKPSSYENCQHWLTELRGNADANVAVGLIGNKSDLDHMRAVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSK 163
T++AK FA++ L F ETSAL+S+NV+ AF ++T IY++VSK
Sbjct: 138 TDEAKNFAQENQLLFTETSALQSSNVDQAFRELITAIYQMVSK 180
>gi|9789019|gb|AAF98238.1| unknown [Homo sapiens]
Length = 256
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/164 (65%), Positives = 133/164 (81%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EFS DS+ TIGVEF T+T+++ VKAQIWDTAG ERYRA
Sbjct: 17 LIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LV+D+TK Q++ V RWL+EL HA+ I++MLVGNKSDL R VP
Sbjct: 77 ITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKK 164
TE+A+ FAE GL F+ETSAL+STNVELAF TVL EI+ VSK+
Sbjct: 137 TEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|242032295|ref|XP_002463542.1| hypothetical protein SORBIDRAFT_01g001690 [Sorghum bicolor]
gi|241917396|gb|EER90540.1| hypothetical protein SORBIDRAFT_01g001690 [Sorghum bicolor]
Length = 236
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 109/163 (66%), Positives = 130/163 (79%), Gaps = 5/163 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
L+GDS VGKS LL+RF R+ FSLDSK+TIGVEF T+T+ + K +KAQIWDTAGQERYRA
Sbjct: 25 LVGDSGVGKSNLLSRFTRNTFSLDSKSTIGVEFATRTIQVDGKTIKAQIWDTAGQERYRA 84
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHAD-KNIIIMLVGNKSDLET---- 115
VTSAYYRGAVGA+LVYD+TK +F N ARWL ELR HAD + +MLVGNK+DL
Sbjct: 85 VTSAYYRGAVGALLVYDVTKSATFGNAARWLRELRDHADGRGTAVMLVGNKTDLAKQRGG 144
Query: 116 LRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIY 158
LRAVP D AE+EGL F+ETSAL++TNV+ AF+T+LTEIY
Sbjct: 145 LRAVPRGDGAALAEREGLSFVETSALDATNVDAAFVTLLTEIY 187
>gi|149048127|gb|EDM00703.1| RAB25, member RAS oncogene family (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 199
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/204 (57%), Positives = 146/204 (71%), Gaps = 11/204 (5%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EFS DS+ TIGVEF T+T+++ VKAQIWDTAG ERYRA
Sbjct: 3 LIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRA 62
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LV+D+TK Q++ V RWL+EL HA+ I++MLVGNKSDL R VP
Sbjct: 63 ITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVP 122
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESE-SGGSSS 179
TE+A FAE GL F+ETSAL+STNVELAF TVL EI+ VSK+ + S + GS+
Sbjct: 123 TEEACMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNSTRTSAITLGSAQ 182
Query: 180 LLKATNIVVPGQEPESGRRSYNCC 203
GQ+P G + CC
Sbjct: 183 ---------AGQDPGPGEKR-ACC 196
>gi|164518908|ref|NP_001101157.2| ras-related protein Rab-25 [Rattus norvegicus]
gi|149048128|gb|EDM00704.1| RAB25, member RAS oncogene family (predicted), isoform CRA_b
[Rattus norvegicus]
gi|197246783|gb|AAI68745.1| RAB25, member RAS oncogene family [Rattus norvegicus]
Length = 213
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 117/204 (57%), Positives = 146/204 (71%), Gaps = 11/204 (5%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EFS DS+ TIGVEF T+T+++ VKAQIWDTAG ERYRA
Sbjct: 17 LIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LV+D+TK Q++ V RWL+EL HA+ I++MLVGNKSDL R VP
Sbjct: 77 ITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESE-SGGSSS 179
TE+A FAE GL F+ETSAL+STNVELAF TVL EI+ VSK+ + S + GS+
Sbjct: 137 TEEACMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNSTRTSAITLGSAQ 196
Query: 180 LLKATNIVVPGQEPESGRRSYNCC 203
GQ+P G + CC
Sbjct: 197 ---------AGQDPGPGEKR-ACC 210
>gi|440903633|gb|ELR54270.1| Ras-related protein Rab-25, partial [Bos grunniens mutus]
Length = 199
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 107/164 (65%), Positives = 133/164 (81%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EFS DS+ TIGVEF T+T+++ +KAQIWDTAG ERYRA
Sbjct: 3 LIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERYRA 62
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LV+D+TK Q++ V RWL+EL HA+ I++MLVGNKSDL R VP
Sbjct: 63 ITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQSREVP 122
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKK 164
TE+A+ FAE GL F+ETSAL+STNVELAF TVL EI+ VSK+
Sbjct: 123 TEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 166
>gi|162464337|ref|NP_001105300.1| small GTP binding protein2 [Zea mays]
gi|1020093|dbj|BAA06702.1| mgp2 GTP-binding protein [Zea mays]
Length = 216
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 120/212 (56%), Positives = 153/212 (72%), Gaps = 18/212 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDS VGKSQLL FAR+ +L+SK+TIGVEF T+++ K VKAQIWDTAGQERYRA
Sbjct: 16 VIGDSGVGKSQLLMGFARNH-NLESKSTIGVEFATRSIRFEDKVVKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D NI+IMLVGNK+DL LRAV
Sbjct: 75 ITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVA 134
Query: 121 TEDAKEFAEKEGLCFM------ETSALESTNVELAFLTVLTEIYRIVSKKALTAN-DESE 173
TEDAK FAE E FM ETSAL+ AF VLT+IYRI S+K L+AN ++
Sbjct: 135 TEDAKAFAEMESTFFMGNIRYGETSALKE-----AFKNVLTDIYRIASQKNLSANAAQTH 189
Query: 174 SGGSSSLLKATNIVVPGQEPESGRRSYNCCTS 205
G +++ ++ QEP+ G+ +CC++
Sbjct: 190 LQGQGKVVQNDDV----QEPQ-GKSKRSCCSN 216
>gi|365990545|ref|XP_003672102.1| hypothetical protein NDAI_0I02910 [Naumovozyma dairenensis CBS 421]
gi|343770876|emb|CCD26859.1| hypothetical protein NDAI_0I02910 [Naumovozyma dairenensis CBS 421]
Length = 219
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 110/204 (53%), Positives = 145/204 (71%), Gaps = 3/204 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF +EF+++SK+TIGVEF T+T+ + K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEVEGKKIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI+K +++N WL EL+ +AD N+ + L+GNKSDL LRAVP
Sbjct: 78 ITSAYYRGAVGALIVYDISKSSTYENCNHWLTELKENADDNVAVGLIGNKSDLAHLRAVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK FA + L F ETSAL S NV+ AF ++T IY++VSK + D + SG ++
Sbjct: 138 TDEAKNFALENQLLFTETSALNSENVDQAFRELITAIYQMVSKHQVDLGDSNTSGATAP- 196
Query: 181 LKATNI-VVPGQEPESGRRSYNCC 203
K I + P S NCC
Sbjct: 197 -KGPTISLTPAPNENKKSSSNNCC 219
>gi|323348755|gb|EGA82996.1| Ypt32p [Saccharomyces cerevisiae Lalvin QA23]
Length = 222
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 112/208 (53%), Positives = 149/208 (71%), Gaps = 8/208 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF DEF+++SK+TIGVEF T+T+ + +K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI+K S++N WL ELR +AD N+ + L+GNKSDL LRAVP
Sbjct: 78 ITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDLAHLRAVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESG----G 176
T++AK FA + + F TSAL S NV+ AF ++ I+++VSK + D S SG G
Sbjct: 138 TDEAKNFAMENQMLFTXTSALNSDNVDKAFRELIVAIFQMVSKHQV---DLSGSGTNNMG 194
Query: 177 SSSLLKATNI-VVPGQEPESGRRSYNCC 203
S+ K I + P + + ++S NCC
Sbjct: 195 SNGAPKGPTISLTPAPKEDKKKKSSNCC 222
>gi|62988286|ref|NP_001017936.1| ras-related protein Rab-25 [Bos taurus]
gi|75069882|sp|Q58DW6.1|RAB25_BOVIN RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|61552966|gb|AAX46328.1| RAB25 [Bos taurus]
gi|296489661|tpg|DAA31774.1| TPA: ras-related protein Rab-25 [Bos taurus]
Length = 213
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 107/164 (65%), Positives = 133/164 (81%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EFS DS+ TIGVEF T+T+++ +KAQIWDTAG ERYRA
Sbjct: 17 LIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LV+D+TK Q++ V RWL+EL HA+ I++MLVGNKSDL R VP
Sbjct: 77 ITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQSREVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKK 164
TE+A+ FAE GL F+ETSAL+STNVELAF TVL EI+ VSK+
Sbjct: 137 TEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|294895479|ref|XP_002775190.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239881188|gb|EER07006.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 178
Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 107/159 (67%), Positives = 131/159 (82%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R EF+L+S++TIGVEF TK++ I K VKAQIWDTAGQERYRA
Sbjct: 20 LIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGSKVVKAQIWDTAGQERYRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+KR SF+N ARWL+ELR HAD +I++MLVGNK DL LRAV
Sbjct: 80 ITSAYYRGAVGALLVYDISKRSSFENAARWLKELREHADSDIVVMLVGNKCDLSHLRAVE 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYR 159
++AK+F L F+ETSALE+TNVE AF +L +IY+
Sbjct: 140 EDEAKKFCTDNDLLFIETSALEATNVEEAFQEILEDIYK 178
>gi|401626081|gb|EJS44046.1| ypt31p [Saccharomyces arboricola H-6]
Length = 223
Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 114/206 (55%), Positives = 144/206 (69%), Gaps = 3/206 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EF++DSK+TIGVEF T+TL I K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI+K S++N WL ELR +AD N+ + L+GNKSDL LRAVP
Sbjct: 78 ITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKSDLAHLRAVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESG---GS 177
TE++K FA + L F ETSAL S NV+ AF ++ IY+ VSK + D + +G G
Sbjct: 138 TEESKTFALENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDSAANGNANGM 197
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCC 203
S+L T + P NCC
Sbjct: 198 SALNGPTISLTPTANENKKGNGNNCC 223
>gi|125553326|gb|EAY99035.1| hypothetical protein OsI_20993 [Oryza sativa Indica Group]
Length = 181
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 111/186 (59%), Positives = 138/186 (74%), Gaps = 5/186 (2%)
Query: 21 FSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITK 80
SL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA+TSAYYRGAVGA++VYD+T+
Sbjct: 1 MSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTR 60
Query: 81 RQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSA 140
+F+NV RW+ EL+ H D NI+IMLVGNK+DL LRAV TEDAK FAEKE FMETSA
Sbjct: 61 HVTFENVERWMRELKDHTDANIVIMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSA 120
Query: 141 LESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSLLKATNIVVPGQEPESGRRSY 200
LES NVE AF VLT+IY +VSKKAL D+ ++ K I V G++ S +
Sbjct: 121 LESMNVENAFTEVLTQIYHVVSKKALDIGDD-----PAAPPKGQTINVGGKDDVSAVKKS 175
Query: 201 NCCTSS 206
CC+S+
Sbjct: 176 ACCSSA 181
>gi|111305025|gb|AAI20092.1| RAB25, member RAS oncogene family [Bos taurus]
Length = 213
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 107/164 (65%), Positives = 133/164 (81%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EFS DS+ TIGVEF T+T+++ +KAQIWDTAG ERYRA
Sbjct: 17 LIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LV+D+TK Q++ V RWL+EL HA+ I++MLVGNKSDL R VP
Sbjct: 77 ITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQSREVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKK 164
TE+A+ FAE GL F+ETSAL+STNVELAF TVL EI+ VSK+
Sbjct: 137 TEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|356520643|ref|XP_003528970.1| PREDICTED: ras-related protein RABA6b-like [Glycine max]
Length = 218
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 109/204 (53%), Positives = 151/204 (74%), Gaps = 4/204 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS L++RFA+DEF LDSK TIGVEF + + + K +KAQIWDTAGQER+RA
Sbjct: 19 LIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQIWDTAGQERFRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TS+YYRGA+GAMLVYDITKR +F NV +WL ELR ++++++LVGNKSDL+ R V
Sbjct: 79 ITSSYYRGALGAMLVYDITKRATFVNVGKWLHELREFGGEDMVVVLVGNKSDLDQSRQVE 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+ K FAE E LCFMETSAL++ NV+ AFL ++T+I+ I+S+K+L E++ G++
Sbjct: 139 REEGKVFAETEELCFMETSALQNLNVDEAFLEMITKIHDIISQKSL----ETKMNGTALN 194
Query: 181 LKATNIVVPGQEPESGRRSYNCCT 204
L + + E + +++ CC+
Sbjct: 195 LPSGKEIHIADEVTATKQAKYCCS 218
>gi|21553627|gb|AAM62720.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
Length = 219
Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 111/206 (53%), Positives = 150/206 (72%), Gaps = 3/206 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGKS LL+R+AR+EF+ SKATIGVE +T+ + I K VKAQIWDTA QER+RA
Sbjct: 17 IIGDSAVGKSNLLSRYARNEFNAHSKATIGVELETQNMEIEGKEVKAQIWDTACQERFRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGAVGA++VYDI++R +F++V RWL+EL+ H+D + MLVGNK DLE++RAV
Sbjct: 77 VTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARMLVGNKCDLESIRAVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+ K AE EGL FMETSAL+STNV+ AF V+ +IY +S+K L ++ S+
Sbjct: 137 VEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQLNSDTYKT---ELSM 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
++V + + ++CC+SS
Sbjct: 194 KNRVSLVKDDNKSSTQGFGFSCCSSS 219
>gi|302783080|ref|XP_002973313.1| rab family GTPase [Selaginella moellendorffii]
gi|300159066|gb|EFJ25687.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 148/204 (72%), Gaps = 1/204 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LL R+AR+EF+ +SKATIGVEFQT+++ I+ K VKAQ+WDTAGQER+RA
Sbjct: 18 LIGDSAVGKSNLLTRYARNEFNQNSKATIGVEFQTQSMRINGKEVKAQVWDTAGQERFRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA+GA++VYDIT++Q+F+N+++WL+ELR + +++ MLVGNK DL +R V
Sbjct: 78 VTSAYYRGALGALVVYDITRKQTFENISKWLDELRTYGGSSVVTMLVGNKCDLTNIREVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+ KE AE E L FMETSAL STNV+ AF V+ EI+ S++ + + + +
Sbjct: 138 VEEGKELAESENLFFMETSALASTNVKTAFQNVVREIFDAKSRRIVPDDYDKDDRVPRGQ 197
Query: 181 LKATNIVVPGQEPE-SGRRSYNCC 203
N G+ P+ R ++CC
Sbjct: 198 KLGLNGAGDGKSPQDDATRRFSCC 221
>gi|256066492|ref|XP_002570538.1| rab11 [Schistosoma mansoni]
gi|350644474|emb|CCD60787.1| rab11, putative [Schistosoma mansoni]
Length = 213
Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 113/207 (54%), Positives = 151/207 (72%), Gaps = 12/207 (5%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGK+ L +RF DEF+L+SK+TIGV+F TK + I K VKAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKTNLRSRFTNDEFNLESKSTIGVDFATKNVKIDGKVVKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K +F N+ +WLEEL+ +A ++IIML+GNK DL+ LR V
Sbjct: 76 ITSAYYRGAVGAILVYDISKPHTFLNLNKWLEELKEYASDDVIIMLIGNKCDLKHLRCVL 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA +A+++G+ FMETSAL+S NVE AF + +IY ++SK S + +++
Sbjct: 136 TEDATRYAKQQGISFMETSALDSINVEEAFNQTIRDIYYLISKHP------SFNMNETNI 189
Query: 181 LKATNIVVPGQEP---ESGRRSYNCCT 204
+ N+ P QEP +S +R + CCT
Sbjct: 190 IPTNNL--PIQEPNIKQSAKRKF-CCT 213
>gi|224135525|ref|XP_002322095.1| predicted protein [Populus trichocarpa]
gi|222869091|gb|EEF06222.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 109/205 (53%), Positives = 147/205 (71%), Gaps = 1/205 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LL+RF+RDEF LDSK TIGVEF + + + K +KAQIWDTAGQER+RA
Sbjct: 17 LIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TS+YYRGA+GA+LVYDIT+R +FDNV +WL ELR +++++LVGNKSD+ LR V
Sbjct: 77 ITSSYYRGALGALLVYDITRRATFDNVKKWLHELRDFGSSDMVVVLVGNKSDISHLREVD 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTA-NDESESGGSSS 179
+D K AE E L FMETSALE+ NVE AF+ ++T I+ I S+K+L A +E+ +
Sbjct: 137 EDDGKNLAETEALYFMETSALENLNVEEAFMQMITRIHEIASQKSLEAKKNETTISTIKA 196
Query: 180 LLKATNIVVPGQEPESGRRSYNCCT 204
L ++ E + +++ CC+
Sbjct: 197 LPVGKEVINIDDEVSATKQASYCCS 221
>gi|1405561|emb|CAA67153.1| FSGTP1 [Fagus sylvatica]
Length = 215
Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 118/207 (57%), Positives = 156/207 (75%), Gaps = 10/207 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF L+SK+TIGVEF T+TL + + VKAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+TK +F+ V WL+ELR HAD NI+IML+GNK+DL+ RAV
Sbjct: 77 ITSAYYRGAVGALLVYDVTKPTTFEQV--WLKELRDHADSNIVIMLIGNKTDLKHSRAVR 134
Query: 121 TEDAKEFA-EKEGLCFMETSALESTNVELAFLTVLTEIYR-IVSKKALTANDESESGGSS 178
TEDA+ F K+ L F+ETSAL++TNVE AF T+L + I+SKK+L++++ + S
Sbjct: 135 TEDAQGFMLRKKALSFIETSALKATNVEKAFQTILCLRFTGIISKKSLSSDEPAPSVIKE 194
Query: 179 SLLKATNIVVPGQEPESGRRSYNCCTS 205
++ +IVV G E + + CC++
Sbjct: 195 AV---KHIVVGGSEANTKK---PCCSN 215
>gi|426216816|ref|XP_004002653.1| PREDICTED: ras-related protein Rab-25 [Ovis aries]
Length = 213
Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 107/164 (65%), Positives = 133/164 (81%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EFS DS+ TIGVEF T+T+++ +KAQIWDTAG ERYRA
Sbjct: 17 LIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LV+D+TK Q++ V RWL+EL HA+ I++MLVGNKSDL R VP
Sbjct: 77 ITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQSREVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKK 164
TE+A+ FAE GL F+ETSAL+STNVELAF TVL EI+ VSK+
Sbjct: 137 TEEARMFAENNGLLFLETSALDSTNVELAFETVLREIFAKVSKQ 180
>gi|354481560|ref|XP_003502969.1| PREDICTED: ras-related protein Rab-25-like [Cricetulus griseus]
Length = 213
Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 108/164 (65%), Positives = 132/164 (80%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EFS DS+ TIGVEF T+T+++ VKAQIWDTAG ERYRA
Sbjct: 17 LIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LV+D+TK Q++ V RWL+EL HA+ I++MLVGNKSDL R VP
Sbjct: 77 ITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKK 164
TE+A FAE GL F+ETSAL+STNVELAF TVL EI+ VSK+
Sbjct: 137 TEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSKQ 180
>gi|410910942|ref|XP_003968949.1| PREDICTED: ras-related protein Rab-25-like [Takifugu rubripes]
Length = 210
Score = 222 bits (566), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 109/206 (52%), Positives = 146/206 (70%), Gaps = 10/206 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGKS LL+RF ++EF+ DS+ TIGVEF T+T+ + +KAQIWDTAG ERYRA
Sbjct: 15 LIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVQLDQYTIKAQIWDTAGLERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K ++++ RWL+EL HAD +I++MLVGNK DL+TLR VP
Sbjct: 75 ITSAYYRGAVGALLVYDISKHLTYESTERWLKELYEHADPHIVVMLVGNKRDLDTLRTVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
+E+A+ FAE +G+ FMETSAL+STNVE AF VL+ I + V+ + +T
Sbjct: 135 SEEAQAFAENKGIMFMETSALDSTNVEAAFNEVLSAIQKKVASQQVTRGS---------- 184
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
+ A + P ++ R CC SS
Sbjct: 185 ISAVTLSSPIGATDTQERKGGCCKSS 210
>gi|384484365|gb|EIE76545.1| GTP-binding protein [Rhizopus delemar RA 99-880]
Length = 223
Score = 222 bits (565), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 110/171 (64%), Positives = 131/171 (76%), Gaps = 1/171 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF +EF+L+SK+TIGVEF TK L I + VKAQIWDT+GQERYRA
Sbjct: 13 LIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATKNLEIDNHTVKAQIWDTSGQERYRA 72
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDL-ETLRAV 119
+T AYYRGAVGA+LVYDIT++ SF NV WL+ELR HAD NI+IMLVGNK DL E+ R V
Sbjct: 73 ITGAYYRGAVGALLVYDITRQSSFQNVQHWLKELRDHADPNIVIMLVGNKVDLSESSRQV 132
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND 170
TED AE+EG F+ETSAL++TNV+ AF TV IY + KK + D
Sbjct: 133 TTEDGGSLAEQEGFLFVETSALDATNVDKAFATVFDTIYSNLPKKTNQSAD 183
>gi|302789646|ref|XP_002976591.1| rab family GTPase [Selaginella moellendorffii]
gi|300155629|gb|EFJ22260.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 222 bits (565), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 148/204 (72%), Gaps = 1/204 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LL R+AR+EF+ +SKATIGVEFQT+++ I+ K VKAQ+WDTAGQER+RA
Sbjct: 18 LIGDSAVGKSNLLTRYARNEFNHNSKATIGVEFQTQSMRINGKEVKAQVWDTAGQERFRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA+GA++VYDIT++Q+F+N+++WL+ELR + +++ MLVGNK DL +R V
Sbjct: 78 VTSAYYRGALGALVVYDITRKQTFENISKWLDELRTYGGSSVVTMLVGNKCDLTDIREVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+ KE AE E L FMETSAL STNV+ AF V+ EI+ S++ + + + +
Sbjct: 138 VEEGKELAESENLFFMETSALASTNVKTAFQNVVREIFDAKSRRIVPDDYDKDDRVPRGQ 197
Query: 181 LKATNIVVPGQEPE-SGRRSYNCC 203
N G+ P+ R ++CC
Sbjct: 198 KLGLNGAGDGKSPQDDATRRFSCC 221
>gi|413934936|gb|AFW69487.1| hypothetical protein ZEAMMB73_585575 [Zea mays]
Length = 224
Score = 222 bits (565), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 117/184 (63%), Positives = 146/184 (79%), Gaps = 5/184 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
++GDSAVGK+QLL RF RDEF LDSK+TIG+EFQT+T+ I VKAQIWDTAGQERYRA
Sbjct: 11 VVGDSAVGKTQLLGRFTRDEFFLDSKSTIGIEFQTRTVDIARHRVKAQIWDTAGQERYRA 70
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLET---LR 117
VTSAYYRGA+GAMLVYD+T R++FD+ RW+ ELR HADK+I++MLVGNK+DL R
Sbjct: 71 VTSAYYRGALGAMLVYDVTSRRTFDHATRWVAELRAHADKSIVVMLVGNKADLARDAGRR 130
Query: 118 AVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGS 177
AV ++A FAE++GL F E SAL NVE AFLT+L EI+ IVS+K L A +E+GG+
Sbjct: 131 AVDADEAAAFAEEQGLFFSEASALSGDNVERAFLTLLREIHAIVSRKTLDA--AAETGGT 188
Query: 178 SSLL 181
+ +L
Sbjct: 189 TDVL 192
>gi|357504951|ref|XP_003622764.1| Ras-related protein ARA-1 [Medicago truncatula]
gi|355497779|gb|AES78982.1| Ras-related protein ARA-1 [Medicago truncatula]
Length = 215
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/169 (63%), Positives = 133/169 (78%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LL+RFAR+EF +SKATIGVEFQT+ + I K VKAQIWDTAGQER+RA
Sbjct: 18 LIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQMVEIDGKEVKAQIWDTAGQERFRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA GA++VYDI++R +F+++ RWL+EL D + MLVGNK DLE +R V
Sbjct: 78 VTSAYYRGAFGALVVYDISRRGTFESIKRWLDELTTQNDSTVARMLVGNKCDLENIREVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAN 169
E+ K AE+EGL FMETSAL+STNV+ AF V+ EIY +S+K L ++
Sbjct: 138 IEEGKALAEEEGLFFMETSALDSTNVQTAFEIVIREIYNNISRKVLNSD 186
>gi|344286892|ref|XP_003415190.1| PREDICTED: ras-related protein Rab-25-like [Loxodonta africana]
Length = 213
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/164 (64%), Positives = 133/164 (81%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EF+ DS+ TIGVEF T+T+++ VKAQIWDTAG ERYRA
Sbjct: 17 LIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LV+D+TK Q++ V RWL+EL HA+ I++MLVGNKSDL R VP
Sbjct: 77 ITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKK 164
T++A+ FAE GL F+ETSAL+STNVELAF TVL EI+ VSK+
Sbjct: 137 TDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|449281797|gb|EMC88784.1| Ras-related protein Rab-25 [Columba livia]
Length = 213
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 108/197 (54%), Positives = 145/197 (73%), Gaps = 8/197 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EF+ DS+ TIGVEF T+T+++ VKAQIWDTAG ERYRA
Sbjct: 16 LIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTIMVGDAVVKAQIWDTAGLERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++V+DITK Q++D V RWL+EL HA+ NI++MLVGNK+DL R VP
Sbjct: 76 ITSAYYRGAVGALVVFDITKHQTYDVVERWLKELYDHAEANIVVMLVGNKTDLAQAREVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKK--------ALTANDES 172
E+AK FA+ GL F+ETSAL+STNVE AF T+L EI+ V ++ A++ +ES
Sbjct: 136 MEEAKMFADNNGLLFVETSALDSTNVEQAFETILKEIFHKVQQQKQRNSQSNAVSLANES 195
Query: 173 ESGGSSSLLKATNIVVP 189
+++ ++ VP
Sbjct: 196 PESAAAARMEKRQCCVP 212
>gi|355714881|gb|AES05148.1| RAB25, member RAS oncoprotein family [Mustela putorius furo]
Length = 199
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 115/205 (56%), Positives = 144/205 (70%), Gaps = 9/205 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EF DS+ TIGVEF T+T+ + +KAQIWDTAG ERYRA
Sbjct: 3 LIGESGVGKTNLLSRFTRNEFKQDSRTTIGVEFSTRTVTLGTAAIKAQIWDTAGLERYRA 62
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LV+D+TK Q++ RWL+EL HA+ I++MLVGNKSDL+ R VP
Sbjct: 63 ITSAYYRGAVGALLVFDLTKHQTYAVAERWLKELYDHAEATIVVMLVGNKSDLQQAREVP 122
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+A+ FAE GL F+ETSAL+STNVELAF TVL EI VSK+ +S S ++
Sbjct: 123 TEEARMFAENNGLLFLETSALDSTNVELAFQTVLKEILTKVSKQ-----RQSSSRTNAIT 177
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
L GQE G + CC S
Sbjct: 178 LGGAQ---AGQEQGPGEKR-ACCIS 198
>gi|50292391|ref|XP_448628.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527940|emb|CAG61591.1| unnamed protein product [Candida glabrata]
Length = 221
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/206 (55%), Positives = 151/206 (73%), Gaps = 6/206 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF +EF+L+SK+TIGVEF T+T+ + K +KAQIWDTAGQERYRA
Sbjct: 19 LIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATRTIKVEDKKIKAQIWDTAGQERYRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI+K +++N WL EL+ +AD N+ I L+GNKSDLE LRAVP
Sbjct: 79 ITSAYYRGAVGALIVYDISKSGTYENCNHWLTELKENADDNVAIGLIGNKSDLEHLRAVP 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+A+ FA + L F ETSAL S NV+LAF ++ +IY++V+K + + ++ GSS
Sbjct: 139 TEEARGFASENQLFFTETSALNSENVDLAFRELIEQIYKMVNKHQVDLGENAK--GSSGA 196
Query: 181 LKATNI---VVPGQEPESGRRSYNCC 203
K I VPG E + +S +CC
Sbjct: 197 PKGPTISLAPVPG-EKKKKSKSNSCC 221
>gi|432883282|ref|XP_004074246.1| PREDICTED: ras-related protein Rab-25-like [Oryzias latipes]
Length = 211
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 111/206 (53%), Positives = 150/206 (72%), Gaps = 9/206 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGKS LL+RF ++EF DS+ TIGVEF T+T+ + + +KAQIWDTAG ERYRA
Sbjct: 15 LIGESGVGKSNLLSRFTKNEFRHDSRTTIGVEFSTRTVQLENFIIKAQIWDTAGLERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K ++++ RWL+EL HAD +I++MLVGNKSDL++ R VP
Sbjct: 75 ITSAYYRGAVGALLVYDISKHLTYESAERWLKELYDHADPHIVVMLVGNKSDLQSQRTVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+A+ FA+++GL FMETSAL+STNVE AF VLT I++ V+ + +T GS S
Sbjct: 135 TEEAQHFADEKGLMFMETSALDSTNVESAFHEVLTAIHKKVASREVTR-------GSISA 187
Query: 181 LKATNIVVPGQEPESGRRSYNCCTSS 206
+ + + E + R+ CC S
Sbjct: 188 VTLSGPIGLNSEQQEERK--GCCKGS 211
>gi|1279542|emb|CAA95859.1| small GTPase [Mangifera indica]
Length = 217
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/164 (64%), Positives = 131/164 (79%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS L RF R+EFSL+SK+TIGVEF T++L + K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLALRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL ELR H D NI++ML+GNKSDL L AV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKK 164
TED AE+E L FMETSALE+TNV+ AF VL++ +++++
Sbjct: 138 TEDGNLLAERESLSFMETSALEATNVDNAFAEVLSKSTALLARR 181
>gi|366993453|ref|XP_003676491.1| hypothetical protein NCAS_0E00600 [Naumovozyma castellii CBS 4309]
gi|342302358|emb|CCC70130.1| hypothetical protein NCAS_0E00600 [Naumovozyma castellii CBS 4309]
Length = 219
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 109/205 (53%), Positives = 146/205 (71%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF +EF+++SK+TIGVEF T+T+ + K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEVEGKKIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI+K +++N WL+ELR +AD N+ + L+GNKSDL LRAVP
Sbjct: 78 ITSAYYRGAVGALIVYDISKSGTYENCNHWLKELRDNADDNVAVGLIGNKSDLAHLRAVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T +AK FA + L F ETSAL S NV+ AF ++T IY++VSK + D +SG +++
Sbjct: 138 TAEAKNFASENELLFTETSALNSENVDQAFRELITAIYQMVSKHQV---DLGDSGNNAAA 194
Query: 181 LKATNIVVPGQEPESGRR--SYNCC 203
+ P ++ S NCC
Sbjct: 195 APKGPTISLTPTPNENKKSSSSNCC 219
>gi|147902449|ref|NP_001086223.1| RAB25, member RAS oncogene family [Xenopus laevis]
gi|49258038|gb|AAH74344.1| MGC84182 protein [Xenopus laevis]
Length = 216
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 107/167 (64%), Positives = 137/167 (82%), Gaps = 2/167 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EF+ DS+ TIGVEF T+TL I VK+QIWDTAG ERYRA
Sbjct: 16 LIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTLTIDGHLVKSQIWDTAGLERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDL-ETLRAV 119
+TSAYYRGAVGA+LVYDITK QS+++V RWL+EL HAD +I++MLVGNKSDL + + V
Sbjct: 76 ITSAYYRGAVGALLVYDITKHQSYESVDRWLKELYDHADASIVVMLVGNKSDLKDEAQEV 135
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIY-RIVSKKA 165
P+E+AK +AE+ GL F+ETSAL++TNVELAF T+L +IY R++ K
Sbjct: 136 PSEEAKAYAERNGLLFIETSALDATNVELAFETILRDIYTRVLKSKG 182
>gi|255583461|ref|XP_002532489.1| protein with unknown function [Ricinus communis]
gi|223527788|gb|EEF29888.1| protein with unknown function [Ricinus communis]
Length = 222
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 104/166 (62%), Positives = 132/166 (79%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LL+RF+RDEF LDSK TIGVEF + + + K +KAQIWDTAGQER+RA
Sbjct: 17 LIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIRVADKLIKAQIWDTAGQERFRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TS+YYRGA+GA+LVYDIT+R +FDNV +WL ELR + + ++++L GNK DL R V
Sbjct: 77 ITSSYYRGALGALLVYDITRRATFDNVKKWLTELREYGNPEMVVVLAGNKCDLSHTREVG 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL 166
E+ K AE EGLCFMETSALE+ NVE AFL ++T+I+ I S+K+L
Sbjct: 137 EEEGKNLAETEGLCFMETSALENLNVEEAFLEMITKIHAITSQKSL 182
>gi|330792269|ref|XP_003284212.1| Rab GTPase [Dictyostelium purpureum]
gi|325085909|gb|EGC39308.1| Rab GTPase [Dictyostelium purpureum]
Length = 223
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 111/191 (58%), Positives = 138/191 (72%), Gaps = 11/191 (5%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGKS LL RF R+EF+ +KATIGV+F TK++ I +K + AQ WDTAGQER+RA
Sbjct: 14 IIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKIITAQCWDTAGQERFRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTS YYRGAVGAM+VYDIT + SF NV RWL ELR A+ +I+IM+VGNKSDLE R VP
Sbjct: 74 VTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAESDILIMMVGNKSDLEMSREVP 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK FAE + F+ETSAL STNV AF T+LT+I+ +VS K D+ +
Sbjct: 134 TKEAKAFAESNKISFLETSALNSTNVNQAFETLLTDIFNLVSSKKPVVVDDVQ------- 186
Query: 181 LKATNIVVPGQ 191
N +VP Q
Sbjct: 187 ----NWLVPNQ 193
>gi|255646177|gb|ACU23574.1| unknown [Glycine max]
Length = 218
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 150/204 (73%), Gaps = 4/204 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS L++RFA+DEF LDSK TIGVEF + + + K +KAQIWDTAGQER+RA
Sbjct: 19 LIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQIWDTAGQERFRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TS+YYRGA+GAMLVYDITKR +F NV +WL ELR ++++++LVGNKSDL+ R V
Sbjct: 79 ITSSYYRGALGAMLVYDITKRATFVNVGKWLHELREFGGEDMVVVLVGNKSDLDQSRQVE 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+ K AE E LCFMETSAL++ NV+ AFL ++T+I+ I+S+K+L E++ G++
Sbjct: 139 REEGKVVAETEELCFMETSALQNLNVDEAFLEMITKIHDIISQKSL----ETKMNGTALN 194
Query: 181 LKATNIVVPGQEPESGRRSYNCCT 204
L + + E + +++ CC+
Sbjct: 195 LPSGKEIHIADEVTATKQAKYCCS 218
>gi|356512992|ref|XP_003525198.1| PREDICTED: ras-related protein RABA6a-like [Glycine max]
Length = 217
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 109/204 (53%), Positives = 147/204 (72%), Gaps = 4/204 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RFA+DEF LDSK TIGVEF + + + K +KAQIWDTAGQER+RA
Sbjct: 17 LIGDSGVGKSNMLSRFAKDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIWDTAGQERFRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TS+YYRGA+GAMLVYDI+ R S++NV++WL ELR ++++++LVGNK DL+ R V
Sbjct: 77 ITSSYYRGALGAMLVYDISMRSSYENVSKWLLELREFGGEDMVVVLVGNKCDLDESREVE 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+ K FAE EGLCFMETSAL++ NVE FL ++T IY + S+K L A E + +L
Sbjct: 137 KEEGKGFAETEGLCFMETSALKNLNVEEVFLQMITRIYDMTSQKNLAAKMEEQ---PINL 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCT 204
L I + E + +++ CC+
Sbjct: 194 LNGKEIHI-ADEVTATKQTSTCCS 216
>gi|358333720|dbj|GAA52200.1| Ras-related protein Rab-11B, partial [Clonorchis sinensis]
Length = 546
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 100/156 (64%), Positives = 131/156 (83%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ K +KAQIWDTAGQERYRA
Sbjct: 2 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVQFGGKTIKAQIWDTAGQERYRA 61
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K +++NV +WL ELR H+D++I++ML+GNK DL LR VP
Sbjct: 62 ITSAYYRGAVGALLVYDISKHSTYENVTQWLHELRDHSDQDIVVMLIGNKCDLRHLRMVP 121
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTE 156
T++A+EFA +E L F ETSAL++TNV+ AF+ VL +
Sbjct: 122 TDEAREFAMREKLFFTETSALDATNVDEAFVQVLKD 157
>gi|225456136|ref|XP_002281955.1| PREDICTED: ras-related protein RABA6b [Vitis vinifera]
gi|297734313|emb|CBI15560.3| unnamed protein product [Vitis vinifera]
Length = 218
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 105/168 (62%), Positives = 133/168 (79%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LL+RF+RDEF LDSK TIGVEF + + + K +KAQIWDTAGQER+RA
Sbjct: 18 LIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIKVGDKLIKAQIWDTAGQERFRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TS+YYRGA+GA+LVYDIT+R +F+N+ +WL ELR +++I+LVGNKSDL R V
Sbjct: 78 ITSSYYRGALGALLVYDITRRATFENLKKWLRELRDFGKPDMVIVLVGNKSDLGHSREVD 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTA 168
E+ K AE EGLCFMETSALE+ NVE AFL ++T+I+ + S+K L A
Sbjct: 138 EEEGKTLAETEGLCFMETSALENLNVEEAFLHMITKIHEVTSQKNLEA 185
>gi|74137312|dbj|BAE22024.1| unnamed protein product [Mus musculus]
Length = 193
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 112/189 (59%), Positives = 137/189 (72%), Gaps = 17/189 (8%)
Query: 24 DSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQS 83
+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI K +
Sbjct: 14 ESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLT 73
Query: 84 FDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALES 143
++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVPT++A+ FAEK L F+ETSA++S
Sbjct: 74 YENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSAMDS 133
Query: 144 TNVELAFLTVLTEIYRIVSKKAL---TANDESESGGSSSLLKATNIVVP----GQEPESG 196
TNVE AF +LTEIYRIVS+K + A+DES +I VP GQ P
Sbjct: 134 TNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGNN------VVDISVPPTTDGQRPN-- 185
Query: 197 RRSYNCCTS 205
CC S
Sbjct: 186 --KLQCCQS 192
>gi|66818593|ref|XP_642956.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74897296|sp|Q550H6.1|RB11C_DICDI RecName: Full=Ras-related protein Rab-11C
gi|60471082|gb|EAL69052.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 224
Score = 219 bits (559), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 109/191 (57%), Positives = 139/191 (72%), Gaps = 11/191 (5%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGKS LL RF R+EF+ +KATIGV+F TK++ I +K + AQ WDTAGQER+RA
Sbjct: 15 IIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKTITAQCWDTAGQERFRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTS YYRGAVGAM+VYDIT + SF NV RWL ELR A+++I+IM+VGNKSDLE R VP
Sbjct: 75 VTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAEQDILIMMVGNKSDLEMSREVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAE + F+ETSAL STNV +F +LT+IY +VS K D+++
Sbjct: 135 TKEAQAFAESNKISFLETSALNSTNVNQSFERLLTDIYHLVSSKKPMVVDDTQ------- 187
Query: 181 LKATNIVVPGQ 191
N +VP Q
Sbjct: 188 ----NWLVPNQ 194
>gi|147899039|ref|NP_001089868.1| uncharacterized protein LOC734934 [Xenopus laevis]
gi|80476446|gb|AAI08571.1| MGC131054 protein [Xenopus laevis]
Length = 216
Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 106/164 (64%), Positives = 134/164 (81%), Gaps = 1/164 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EFS DS+ TIGVEF T+TL + VK+QIWDTAG ERYRA
Sbjct: 16 LIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTLTVDGHLVKSQIWDTAGLERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDL-ETLRAV 119
+TSAYYRGAVGA+LVYDITK QS++NV RWL+EL HAD +I++MLVGNK DL + + V
Sbjct: 76 ITSAYYRGAVGALLVYDITKHQSYENVDRWLKELYDHADASIVVMLVGNKCDLKDEAQEV 135
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSK 163
P+E+AK +AE+ GL F+ETSAL++TNVE+AF T+L +IY V K
Sbjct: 136 PSEEAKAYAEQNGLLFIETSALDATNVEVAFETILRDIYTRVLK 179
>gi|322694053|gb|EFY85893.1| GTP-binding protein ypt3 [Metarhizium acridum CQMa 102]
Length = 264
Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 99/144 (68%), Positives = 124/144 (86%)
Query: 12 LLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVG 71
L +RF R+EF+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA+TSAYYRGAVG
Sbjct: 35 LQSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRAITSAYYRGAVG 94
Query: 72 AMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKE 131
A+LVYDI+K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVPT++AK FA +
Sbjct: 95 ALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVPTDEAKSFASEN 154
Query: 132 GLCFMETSALESTNVELAFLTVLT 155
L F+ETSAL+++NVELAF +LT
Sbjct: 155 HLSFIETSALDASNVELAFQNILT 178
>gi|432915693|ref|XP_004079205.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 112/206 (54%), Positives = 141/206 (68%), Gaps = 9/206 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDESESGGS 177
T++A+ FA +T +++ + F TEIYRIVS+K + +ANDES
Sbjct: 136 TDEARAFAGNNHPKKTKTPYVQAFGISALFSFSYTEIYRIVSQKQIAERSANDESPGN-- 193
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCC 203
+I VP CC
Sbjct: 194 ----NVVDISVPPTTDGQRGSKLQCC 215
>gi|357514495|ref|XP_003627536.1| Ras-related protein Rab-11A [Medicago truncatula]
gi|355521558|gb|AET02012.1| Ras-related protein Rab-11A [Medicago truncatula]
Length = 216
Score = 219 bits (557), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 118/196 (60%), Positives = 141/196 (71%), Gaps = 24/196 (12%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGK+Q+L+RF+++E T+ I+ K +KAQIWDTAGQERYRA
Sbjct: 31 VIGDSAVGKTQILSRFSKNE----------------TVTINGKVIKAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA+GAMLVYDITKRQSFD+VA+W+EELR HAD +I+IMLVGNK DL LR VP
Sbjct: 75 VTSAYYRGALGAMLVYDITKRQSFDHVAKWVEELRAHADNSIVIMLVGNKGDLVDLRMVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TEDA EFAE +GL F ETSAL NVE AF+ +L EI +VSKKAL E G +
Sbjct: 135 TEDAVEFAEDQGLFFSETSALTGVNVEGAFMKLLEEINSVVSKKAL------ECGNVKGI 188
Query: 181 -LKATNI-VVPGQEPE 194
LK + I V+ G E E
Sbjct: 189 ALKGSKIDVISGAELE 204
>gi|268561566|ref|XP_002638358.1| Hypothetical protein CBG18559 [Caenorhabditis briggsae]
Length = 214
Score = 219 bits (557), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 146/204 (71%), Gaps = 9/204 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
L+GDS VGKS LL+RF R+ F L++K+TIGVEF T++++I K +KA IWDTAGQERYRA
Sbjct: 17 LVGDSGVGKSNLLSRFTRNTFDLETKSTIGVEFATRSMMIEGKKIKATIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADK-NIIIMLVGNKSDLETLRAV 119
+T AYYRGA+G ++VYDI K Q+F N+ +WL+ELR HAD+ NI IMLVGNK+DL LRAV
Sbjct: 77 ITPAYYRGALGILIVYDIAKHQTFQNIDQWLKELRNHADESNISIMLVGNKTDLRHLRAV 136
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSS 179
PT++A +A++ + F+ETSAL+STNVE A +LT+IY+ VS K + GG +
Sbjct: 137 PTQEAAIYADRNHMSFIETSALDSTNVEEALRNLLTDIYKTVSTKYGVDSKPVPYGGLGT 196
Query: 180 LLKATNIVVPGQEPESGRRSYNCC 203
++ TN+ P + CC
Sbjct: 197 IM--TNV------PSTEDVKKKCC 212
>gi|224083990|ref|XP_002187600.1| PREDICTED: ras-related protein Rab-25 [Taeniopygia guttata]
Length = 213
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/189 (57%), Positives = 144/189 (76%), Gaps = 6/189 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EF+ DS+ TIGVEF T+T+++ VKAQIWDTAG ERYRA
Sbjct: 16 LIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTILVGDAVVKAQIWDTAGLERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++V+DITK Q++D V RWL+EL HA+ +I++MLVGNK+DL R VP
Sbjct: 76 ITSAYYRGAVGALVVFDITKHQTYDVVDRWLKELYDHAEASIVVMLVGNKTDLAQAREVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSK------KALTANDESES 174
E+AK FA+ GL F+ETSAL+STNVE AF T+L EI+ V K ++ T + SES
Sbjct: 136 MEEAKMFADNNGLLFVETSALDSTNVEEAFETILKEIFYKVQKQKQRSSQSNTVSLASES 195
Query: 175 GGSSSLLKA 183
S++ ++A
Sbjct: 196 PASTAPVQA 204
>gi|388494812|gb|AFK35472.1| unknown [Medicago truncatula]
Length = 215
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 106/166 (63%), Positives = 130/166 (78%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LL+RFAR+EF +SKATIGVE QT+ + I K VKAQIWDTAGQER+RA
Sbjct: 18 LIGDSAVGKSNLLSRFARNEFDSNSKATIGVELQTQMVEIDGKEVKAQIWDTAGQERFRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA GA++VYDI++R +F+++ RWL+EL D + MLVGNK DLE +R V
Sbjct: 78 VTSAYYRGAFGALVVYDISRRGTFESIKRWLDELTTQNDSTVARMLVGNKCDLENIREVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL 166
E+ K AE+EGL FMETSAL+STNV+ AF V+ EIY +S+K L
Sbjct: 138 IEEGKALAEEEGLFFMETSALDSTNVQTAFEIVIREIYNNISRKVL 183
>gi|56118662|ref|NP_001007903.1| RAB25, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|51513190|gb|AAH80339.1| RAB25, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89271301|emb|CAJ82444.1| RAB25, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 106/169 (62%), Positives = 137/169 (81%), Gaps = 2/169 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EF+ DS+ TIGVEF T+TL I VK+QIWDTAG ERYRA
Sbjct: 16 LIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTLTIDGHLVKSQIWDTAGLERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDL-ETLRAV 119
+TSAYYRGAVGA+LVYDITK QS+++V RWL+EL HAD +I++MLVGNK DL + + V
Sbjct: 76 ITSAYYRGAVGALLVYDITKHQSYESVDRWLKELYDHADASIVVMLVGNKCDLKDEAQEV 135
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIY-RIVSKKALT 167
P+E+AK +AE+ GL F+ETSAL++TNVELAF ++L +IY R++ K T
Sbjct: 136 PSEEAKAYAERNGLLFIETSALDATNVELAFESILRDIYMRVLKSKGET 184
>gi|356524680|ref|XP_003530956.1| PREDICTED: ras-related protein RABA6a-like [Glycine max]
Length = 218
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 110/205 (53%), Positives = 148/205 (72%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RFA+DEF LDSK TIGVEF + + + K +KAQIWDTAGQER+RA
Sbjct: 17 LIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVGDKLIKAQIWDTAGQERFRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLE-TLRAV 119
+TS+YYRGA+GAMLVYDI++R S++NV++WL ELR ++++++LVGNK DL+ R V
Sbjct: 77 ITSSYYRGALGAMLVYDISRRSSYENVSKWLLELREFGGEDMVVVLVGNKCDLDGQSREV 136
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSS 179
E+ K FAE EGLCFMETSAL++ NVE FL ++T IY + S+K L A + + +
Sbjct: 137 DKEEGKGFAETEGLCFMETSALKNLNVEEVFLQMITRIYDMTSQKNLAAKMDEK---PIN 193
Query: 180 LLKATNIVVPGQEPESGRRSYNCCT 204
LL I + E + ++S CC+
Sbjct: 194 LLNGKEIHIA-DEVTATKQSSTCCS 217
>gi|403214005|emb|CCK68506.1| hypothetical protein KNAG_0B00580 [Kazachstania naganishii CBS
8797]
Length = 225
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 101/163 (61%), Positives = 131/163 (80%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF +EF+++SK+TIGVEF T+T+ + K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEVEGKKIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI+K +++N WL ELR +AD N+ + L+GNKSDL LRAVP
Sbjct: 78 ITSAYYRGAVGALIVYDISKSSTYENCNHWLTELRENADDNVAVGLIGNKSDLAHLRAVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSK 163
T++AK FA++ L F ETSAL S NV+ AF ++T IY++VSK
Sbjct: 138 TDEAKNFAQENQLLFTETSALNSENVDQAFRELITAIYQMVSK 180
>gi|365760833|gb|EHN02521.1| Ypt32p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 222
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 109/205 (53%), Positives = 145/205 (70%), Gaps = 2/205 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF DEF+++SK+TIGVEF T+T+ + +K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI+K S++N WL ELR +AD N+ + L+GNKSDL LRAVP
Sbjct: 78 ITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDLAHLRAVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++AK FA + + F ETSAL S NV+ AF ++ I+++VSK + N + G S+
Sbjct: 138 TDEAKNFAMENQMLFTETSALNSDNVDRAFRELIVAIFQMVSKHQVDLNGSGTNNGGSNG 197
Query: 181 LKATNIVVPGQEPESG--RRSYNCC 203
+ P G ++S NCC
Sbjct: 198 GPKGPTISLTPAPNEGKKKKSSNCC 222
>gi|258571595|ref|XP_002544601.1| GTP-binding protein ypt3 [Uncinocarpus reesii 1704]
gi|237904871|gb|EEP79272.1| GTP-binding protein ypt3 [Uncinocarpus reesii 1704]
Length = 203
Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 110/203 (54%), Positives = 140/203 (68%), Gaps = 33/203 (16%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+LDSK+TIGVEF T+++ + K +K+QIWDTAGQERYRA
Sbjct: 34 LIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDTAGQERYRA 93
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 94 ITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 153
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+AK+FA +I+RIVS KAL + D +++ S
Sbjct: 154 TEEAKQFA---------------------------KIFRIVSSKALDSGDSAQNPLSD-- 184
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ + Q+PES + CC
Sbjct: 185 -RKVVEITKTQDPESKQ---GCC 203
>gi|410927462|ref|XP_003977165.1| PREDICTED: ras-related protein Rab-25-like [Takifugu rubripes]
Length = 208
Score = 216 bits (550), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 103/166 (62%), Positives = 132/166 (79%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGKS LL+R+ ++EF+ DS+ TIGVEF T+T+ ++ +KAQIWDTAG ERYRA
Sbjct: 15 LIGESGVGKSNLLSRYTKNEFNHDSRTTIGVEFSTRTVELNGFTIKAQIWDTAGLERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDITK ++D++ RWL+EL HA+ NI++MLVGNK+DLE R+VP
Sbjct: 75 ITSAYYRGAVGALLVYDITKHLTYDSMERWLKELYEHAEANIVVMLVGNKTDLELERSVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL 166
TE+A+ FAE L F+E+SALESTNVE AF VL EI + K L
Sbjct: 135 TEEARGFAENHKLLFLESSALESTNVEAAFNNVLMEIQKKTHNKEL 180
>gi|115469954|ref|NP_001058576.1| Os06g0714600 [Oryza sativa Japonica Group]
gi|53791772|dbj|BAD53566.1| putative PRA2 [Oryza sativa Japonica Group]
gi|113596616|dbj|BAF20490.1| Os06g0714600 [Oryza sativa Japonica Group]
gi|125556744|gb|EAZ02350.1| hypothetical protein OsI_24454 [Oryza sativa Indica Group]
gi|125598494|gb|EAZ38274.1| hypothetical protein OsJ_22652 [Oryza sativa Japonica Group]
Length = 225
Score = 216 bits (550), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 110/170 (64%), Positives = 136/170 (80%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGK+QLL RF +DEF +DSK+TIG+EFQT+T+ I K VKAQIWDTAGQERYRA
Sbjct: 12 VIGDSAVGKTQLLGRFTKDEFFIDSKSTIGIEFQTRTVEIGGKRVKAQIWDTAGQERYRA 71
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA+GAMLVYD+T R+SF + ARWL +LR HAD +I++ML+GNK+DL RAV
Sbjct: 72 VTSAYYRGALGAMLVYDVTSRRSFHHAARWLHDLRAHADNSIVVMLIGNKADLSHARAVA 131
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND 170
++A FAE +GL F E SAL NVE AFL +L EI+ IVS+++L D
Sbjct: 132 ADEAAAFAEDQGLFFSEASALSGDNVEEAFLGLLREIHAIVSRRSLLEMD 181
>gi|363746901|ref|XP_003643843.1| PREDICTED: ras-related protein Rab-25-like, partial [Gallus gallus]
Length = 156
Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 103/154 (66%), Positives = 128/154 (83%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EF+ DS+ TIGVEF T+T+++ VKAQIWDTAG ERYRA
Sbjct: 2 LIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTVLVGDAAVKAQIWDTAGLERYRA 61
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++V+DITK Q++D V RWL+EL HA+ +I++MLVGNKSDL R VP
Sbjct: 62 ITSAYYRGAVGALVVFDITKHQTYDVVERWLKELYDHAEASIVVMLVGNKSDLAQEREVP 121
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVL 154
TE+AK FAE +GL F+ETSAL+STNVE AF TVL
Sbjct: 122 TEEAKMFAENKGLLFIETSALDSTNVEEAFETVL 155
>gi|431892315|gb|ELK02755.1| Ras-related protein Rab-25 [Pteropus alecto]
Length = 190
Score = 215 bits (548), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 102/154 (66%), Positives = 126/154 (81%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EFS DS+ TIGVEF T+T+++ VKAQIWDTAG ERYRA
Sbjct: 35 LIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRA 94
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LV+D+TK Q++ V RWL+EL HA+ I++MLVGNKSDL R VP
Sbjct: 95 ITSAYYRGAVGALLVFDLTKHQTYSVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVP 154
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVL 154
T++A+ FAE GL F+ETSAL+STNVELAF TVL
Sbjct: 155 TDEARMFAENNGLLFLETSALDSTNVELAFETVL 188
>gi|145504587|ref|XP_001438260.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831454|emb|CAI39309.1| rab_C29 [Paramecium tetraurelia]
gi|124405432|emb|CAK70863.1| unnamed protein product [Paramecium tetraurelia]
Length = 216
Score = 215 bits (548), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 91/169 (53%), Positives = 137/169 (81%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS+VGKS +L+RF + +F+ DS+ TIGVEF T++L + K ++AQIWDT GQERY++
Sbjct: 17 LIGDSSVGKSNILSRFTKRQFNFDSQPTIGVEFATRSLTENGKIIQAQIWDTCGQERYKS 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGAML+YDITK+++F+N+ +W++EL+ +A+ N++ ML+GNK+DL+ R VP
Sbjct: 77 ITSAYYRGAVGAMLIYDITKQKTFENIEKWIQELKEYAETNVVAMLIGNKADLKAQRKVP 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAN 169
++ A +FAE + FME SA + TNV+LAF ++ EIY++++K++L N
Sbjct: 137 SDKAAQFAENHTMAFMEVSAFDGTNVDLAFSRLINEIYQLINKQSLAEN 185
>gi|117655459|gb|ABK55619.1| RAB 11-a [Euplotes octocarinatus]
Length = 231
Score = 215 bits (547), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 108/173 (62%), Positives = 133/173 (76%), Gaps = 1/173 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RFA++EF+L+SK TIGVEF TKT+ K +KAQIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKSNLLSRFAKNEFNLESKTTIGVEFVTKTIECGSKIIKAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAV A LVYDITK +F NV +WL+EL+ +AD NI++MLVGNK+DL LRAV
Sbjct: 77 ITSAYYRGAVAAFLVYDITKLHTFQNVEKWLQELKDYADSNIVVMLVGNKTDLNNLRAVK 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESE 173
EDA+ +AEK L F+ETSAL+STNV AF ++ +IY K +E+E
Sbjct: 137 VEDAQIYAEKNELAFIETSALDSTNVVEAFEQII-QIYHNSESKFGDQKEEAE 188
>gi|488700|emb|CAA55865.1| Rab [Medicago sativa]
Length = 217
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 115/205 (56%), Positives = 147/205 (71%), Gaps = 5/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EF+L+SK+TIGVEF T+TL + K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV + E +LVGNK+DL L AV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHGTFENVRQMAERTAKPHRFQHCCVLVGNKADLRHLVAVS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TED K +AEKE L FMETSALE+TNVE +F VLT+IYRI+SKKA+ + +E+G +S
Sbjct: 138 TEDGKSYAEKESLYFMETSALEATNVENSFAEVLTQIYRILSKKAV---EGAENGNASVP 194
Query: 181 LKATNIVVPGQEPESGRRSYNCCTS 205
K I + + S + CC+S
Sbjct: 195 AKGEKIDL--KNDVSALKRVGCCSS 217
>gi|440301486|gb|ELP93872.1| rab11, putative [Entamoeba invadens IP1]
Length = 213
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 103/203 (50%), Positives = 143/203 (70%), Gaps = 6/203 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
L+G+S VGKS LL RF R+EF D ++TIGVEF T+++V H KN++AQIWDTAGQERYRA
Sbjct: 17 LVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSIVYHEKNIRAQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T+AYYRGA+GA++VYDITK+ SF++V RWL EL +AD+ ++ M++GNKSDL R V
Sbjct: 77 ITNAYYRGALGALVVYDITKKSSFESVERWLNELHENADRKVLQMIIGNKSDLNQTREVT 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+ K+ AE F ETSAL+ NVE AF+T+L +IY + A DE ++ +
Sbjct: 137 TEEGKKLAEDNKAFFFETSALDGNNVEDAFMTLLKKIY---DESAKVVVDEVKTEAKPT- 192
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
A +V+ +EP++ + CC
Sbjct: 193 --ADTVVLTHEEPKATEKQQKCC 213
>gi|410081132|ref|XP_003958146.1| hypothetical protein KAFR_0F04160 [Kazachstania africana CBS 2517]
gi|372464733|emb|CCF59011.1| hypothetical protein KAFR_0F04160 [Kazachstania africana CBS 2517]
Length = 245
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 102/170 (60%), Positives = 132/170 (77%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF +EF+++SK+TIGVEF T+T+ + K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEMEGKKIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI+K +++N WL ELR +AD N+ + L+GNKSDL LRAVP
Sbjct: 78 ITSAYYRGAVGALIVYDISKSSTYENCNHWLSELRENADDNVAVGLIGNKSDLAHLRAVP 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND 170
T++AK FA + L F ETSAL S NV+ AF ++T IY++VSK + D
Sbjct: 138 TDEAKNFALENQLLFTETSALNSENVDQAFRELITAIYQMVSKHQVDLGD 187
>gi|9719734|gb|AAF97836.1|AC034107_19 Contains similarity to ras-related GTP binding protein from Oryza
sativa gb|D13758 and is a member of the Ras PF|00071
family [Arabidopsis thaliana]
Length = 326
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 104/192 (54%), Positives = 141/192 (73%), Gaps = 3/192 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LL+RF+RDEF LDSK TIGV+F + + + K +KAQIWDTAGQER+RA
Sbjct: 18 LIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQIWDTAGQERFRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TS+YYRGA+GA+L+YDIT+R +F N+ +WL ELRG + +++LVGNKSDL R V
Sbjct: 78 ITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVLVGNKSDLGQSREVE 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+ K AE EGL F+ETSALE+ NVE AFL+++ I+ ++++K + N + G + S
Sbjct: 138 EEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQKIVLDNRLNGDGNNES- 196
Query: 181 LKATNIVVPGQE 192
+V PG+E
Sbjct: 197 --NGAVVPPGKE 206
>gi|70937938|ref|XP_739710.1| small GTPase Rab11 [Plasmodium chabaudi chabaudi]
gi|56516907|emb|CAH87623.1| small GTPase Rab11, putative [Plasmodium chabaudi chabaudi]
Length = 202
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/190 (56%), Positives = 142/190 (74%), Gaps = 4/190 (2%)
Query: 15 RFARDEFSLDSKATIGVEFQTKTLVIHH-KNVKAQIWDTAGQERYRAVTSAYYRGAVGAM 73
RF RDEF+L+SK+TIGVEF TK++ + + K +KAQIWDTAGQERYRA+TSAYYRGAVGA+
Sbjct: 16 RFTRDEFNLESKSTIGVEFATKSIQLKNDKIIKAQIWDTAGQERYRAITSAYYRGAVGAL 75
Query: 74 LVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGL 133
LVYDITK+ +F+N+ +WL+ELR +AD NI+I+LVGNKSDL+ LR + DA +FA+KE L
Sbjct: 76 LVYDITKKNTFENIEKWLKELRDNADSNIVILLVGNKSDLKHLRVINDNDATQFAKKEKL 135
Query: 134 CFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSLLKATNIVVPGQEP 193
F+ETSALE+TNVELAF +L EIY + KK T ++++ + K N+ E
Sbjct: 136 AFIETSALEATNVELAFHQLLNEIYNVRQKKQATKSEDNVNIQPRG--KKINVDDDNDEN 193
Query: 194 ESGRRSYNCC 203
E ++ CC
Sbjct: 194 EKKPKT-KCC 202
>gi|405952895|gb|EKC20651.1| Ras-related protein Rab-11A [Crassostrea gigas]
Length = 234
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/205 (51%), Positives = 152/205 (74%), Gaps = 11/205 (5%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
L GDS VGK+ LL+RF R+EFSL+S++TIGVEF T+++ I K +KAQIWDTAGQ+RYRA
Sbjct: 36 LTGDSGVGKTNLLSRFTRNEFSLESRSTIGVEFATRSVHIDGKTLKAQIWDTAGQDRYRA 95
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T+AYYR AVG + VYDI KR +FDN+ +WL+E R D ++I+MLVGNK+DL LRAV
Sbjct: 96 ITNAYYRKAVGVIFVYDIAKRPTFDNLDKWLKEARNFTDDDVILMLVGNKTDLRHLRAVS 155
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSS-- 178
+++A+ +AEK + ++ETSAL+ T+V+LAF ++L EIY +S+K L + ++GG +
Sbjct: 156 SQEARSYAEKNNMSYIETSALDCTHVDLAFQSILKEIYSTISQKGL----KDDTGGFNLP 211
Query: 179 SLLKATNIVVPGQEPESGRRSYNCC 203
S++ + +I + E E R+ CC
Sbjct: 212 SVVDSMDIGIT--ETEEKRK---CC 231
>gi|145335857|ref|NP_173258.2| RAB GTPase homolog A6B [Arabidopsis thaliana]
gi|332320574|sp|Q0WQN4.2|RAA6B_ARATH RecName: Full=Ras-related protein RABA6b; Short=AtRABA6b
gi|332191565|gb|AEE29686.1| RAB GTPase homolog A6B [Arabidopsis thaliana]
Length = 229
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 104/192 (54%), Positives = 141/192 (73%), Gaps = 3/192 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LL+RF+RDEF LDSK TIGV+F + + + K +KAQIWDTAGQER+RA
Sbjct: 18 LIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQIWDTAGQERFRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TS+YYRGA+GA+L+YDIT+R +F N+ +WL ELRG + +++LVGNKSDL R V
Sbjct: 78 ITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVLVGNKSDLGQSREVE 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+ K AE EGL F+ETSALE+ NVE AFL+++ I+ ++++K + N + G + S
Sbjct: 138 EEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQKIVLDNRLNGDGNNES- 196
Query: 181 LKATNIVVPGQE 192
+V PG+E
Sbjct: 197 --NGAVVPPGKE 206
>gi|110737235|dbj|BAF00565.1| hypothetical protein [Arabidopsis thaliana]
Length = 229
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 104/192 (54%), Positives = 141/192 (73%), Gaps = 3/192 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LL+RF+RDEF LDSK TIGV+F + + + K +KAQIWDTAGQER+RA
Sbjct: 18 LIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQIWDTAGQERFRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TS+YYRGA+GA+L+YDIT+R +F N+ +WL ELRG + +++LVGNKSDL R V
Sbjct: 78 ITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVLVGNKSDLGQSREVE 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+ K AE EGL F+ETSALE+ NVE AFL+++ I+ ++++K + N + G + S
Sbjct: 138 EEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQKIVLDNRLNGDGNNES- 196
Query: 181 LKATNIVVPGQE 192
+V PG+E
Sbjct: 197 --NGAVVPPGKE 206
>gi|302142935|emb|CBI20230.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 102/152 (67%), Positives = 125/152 (82%)
Query: 20 EFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDIT 79
+FSL+SK+TIGVEF T+++ + K VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+T
Sbjct: 15 KFSLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVT 74
Query: 80 KRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETS 139
+ +F+NV RWL+ELR H D +I+IMLVGNK DL LRAV +DAK FAE+E FMETS
Sbjct: 75 RHVTFENVERWLKELRDHTDSHIVIMLVGNKGDLRHLRAVSIDDAKAFAERENTFFMETS 134
Query: 140 ALESTNVELAFLTVLTEIYRIVSKKALTANDE 171
ALES NVE AF VLT+IY++VS+KAL D+
Sbjct: 135 ALESMNVENAFTEVLTQIYQVVSRKALDIGDD 166
>gi|297850210|ref|XP_002892986.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297338828|gb|EFH69245.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 229
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 100/179 (55%), Positives = 134/179 (74%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LL+RF+RDEF LDSK TIGV+F + + + K +KAQIWDTAGQER+RA
Sbjct: 18 LIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQIWDTAGQERFRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TS+YYRGA+GA+L+YDIT+R +F N+ +WL ELRG + +++LVGNKSDL R V
Sbjct: 78 ITSSYYRGALGALLIYDITRRITFKNIGKWLSELRGFSSPETVVVLVGNKSDLGQSREVE 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSS 179
E+ K AE EGL F+ETSALE+ NVE AFL+++ I+ ++++K N + G + S
Sbjct: 138 EEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQKTAVDNRPNGDGNNES 196
>gi|281212546|gb|EFA86706.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 223
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 109/209 (52%), Positives = 140/209 (66%), Gaps = 6/209 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGKS LL RF R+EF+ +KATIGV+F TK++ I +K + AQ WDTAGQER+RA
Sbjct: 15 IIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIENKVITAQCWDTAGQERFRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTS YYRGAVGAM+VYDIT + SF NV RWL ELR AD +I+IM+VGNKSDL++ R V
Sbjct: 75 VTSGYYRGAVGAMIVYDITSKVSFKNVTRWLNELREMADPDILIMMVGNKSDLDSAREVS 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FA+ + F+ETSAL S+NV LAF +LT+IY +K D+ + S
Sbjct: 135 TQEAQSFAQSHKISFLETSALNSSNVNLAFERLLTDIYHHFGQKKQVVMDDGQEWLKPST 194
Query: 181 LKATNIVVPGQEPESGRRSYN------CC 203
I + P S S + CC
Sbjct: 195 SSGHKITPLAETPVSSTTSTHQEKKKGCC 223
>gi|328876805|gb|EGG25168.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 221
Score = 212 bits (540), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 113/213 (53%), Positives = 145/213 (68%), Gaps = 15/213 (7%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGKS LL RF R+EF+ +KATIGV+F TK++ I K + AQ WDTAGQER+RA
Sbjct: 14 IIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIEGKVITAQCWDTAGQERFRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTS YYRGA+GAM+VYDIT + SF NV RWL ELR A+ +I++M+VGNKSDLE+ R V
Sbjct: 74 VTSGYYRGALGAMIVYDITSKISFKNVTRWLNELREMAEPDILVMMVGNKSDLESSREVS 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIY-RIVSKKALTANDE-------S 172
T +A+ FAE + F+ETSAL STNV L+F +LT+IY + KKA D+ +
Sbjct: 134 TREAQSFAEANKISFLETSALNSTNVNLSFEKLLTDIYNQFGQKKAQVVMDDGQEWLKPT 193
Query: 173 ESGGSSSLLK--ATNIVVPGQEPESGRRSYNCC 203
+SG + L N+ QEP+ G CC
Sbjct: 194 QSGQKITPLNEAPVNVTSTHQEPKKG-----CC 221
>gi|145523367|ref|XP_001447522.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834407|emb|CAI44537.1| rab_B25 [Paramecium tetraurelia]
gi|124415033|emb|CAK80125.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 212 bits (539), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 103/203 (50%), Positives = 143/203 (70%), Gaps = 9/203 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
L GDS VGKS LL RF +++F+ DSK TIGVEF T+++ I K +KAQIWDTAGQERYRA
Sbjct: 16 LSGDSGVGKSNLLLRFTKNQFNPDSKTTIGVEFATRSISISGKIIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGA+GA+LVYDIT +QSF++V RW++E+R +ADK+I+IM++GNKSDL+ LRA+
Sbjct: 76 ITSAYYRGAIGAVLVYDITNKQSFESVERWIQEVRENADKDIVIMIIGNKSDLKHLRAIR 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE ++ A+ + FME SA + TNV+ AF ++ +IY+ ++K+ + S G
Sbjct: 136 TESGQDLAQMYKVAFMEASAQDGTNVDQAFTQIIQQIYQNLTKQLQKYDQMSHLQGEKLD 195
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
L+ T SG + CC
Sbjct: 196 LEITT---------SGNKKQGCC 209
>gi|361128636|gb|EHL00566.1| putative Ras-related protein Rab-11B [Glarea lozoyensis 74030]
Length = 149
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 95/136 (69%), Positives = 119/136 (87%)
Query: 20 EFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDIT 79
+F+LDSK+TIGVEF T+++ + K +KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI+
Sbjct: 6 KFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIS 65
Query: 80 KRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETS 139
K Q+++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVPTE+AK+FA + L F+ETS
Sbjct: 66 KHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTEEAKQFASENNLSFIETS 125
Query: 140 ALESTNVELAFLTVLT 155
AL+++NVELAF +LT
Sbjct: 126 ALDASNVELAFQNILT 141
>gi|354459567|pdb|3RWM|B Chain B, Crystal Structure Of Ypt32 In Complex With Gppnhp
gi|354459568|pdb|3RWO|B Chain B, Crystal Structure Of Ypt32 In Complex With Gdp
gi|354459569|pdb|3RWO|A Chain A, Crystal Structure Of Ypt32 In Complex With Gdp
Length = 185
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/163 (60%), Positives = 129/163 (79%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF DEF+++SK+TIGVEF T+T+ + +K +KAQIWDTAG ERYRA
Sbjct: 15 LIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGLERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI+K S++N WL ELR +AD N+ + L+GNKSDL LRAVP
Sbjct: 75 ITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDLAHLRAVP 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSK 163
T++AK FA + + F ETSAL S NV+ AF ++ I+++VSK
Sbjct: 135 TDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSK 177
>gi|326488455|dbj|BAJ93896.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 225
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 109/172 (63%), Positives = 134/172 (77%), Gaps = 4/172 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDS VGK+QLL RF R +F LDSK+TIG+EFQT+T+ I + VKAQIWDTAGQERYRA
Sbjct: 12 VIGDSGVGKTQLLGRFTRGDFCLDSKSTIGIEFQTRTVDIARRRVKAQIWDTAGQERYRA 71
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETL---- 116
VTSAYYRGA+GAMLVYD+T+R SF + ARW+ ELR HADK+I++ LVGNK+DL T
Sbjct: 72 VTSAYYRGALGAMLVYDVTRRDSFGHAARWVAELRAHADKSIVVALVGNKADLATAAPAR 131
Query: 117 RAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTA 168
R V ++A+ FAE++GL F E SAL NVE AFL +L EI+ VS+K L A
Sbjct: 132 REVRADEAEAFAEEQGLFFYEASALSGDNVEAAFLGLLEEIHAAVSRKPLEA 183
>gi|123410263|ref|XP_001303658.1| guanine nucleotide regulatory protein [Trichomonas vaginalis G3]
gi|67944367|gb|AAY83819.1| small Rab GTPase Rab11b [Trichomonas vaginalis]
gi|72536126|gb|AAZ73171.1| small Rab GTPase Rab11 [Trichomonas vaginalis]
gi|121885054|gb|EAX90728.1| guanine nucleotide regulatory protein, putative [Trichomonas
vaginalis G3]
Length = 211
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 136/172 (79%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGK+ LLARF RD+F+ +SK+TIGVEF +KT+ I K +KAQIWDTAGQERYRA
Sbjct: 14 LIGDSGVGKTNLLARFTRDQFNPESKSTIGVEFASKTMQIEGKTIKAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGA+GA+L+YDIT +F+++ +WL+ELR +AD+ II+MLVGNK DL RAV
Sbjct: 74 ITSAYYRGAIGALLLYDITASLTFNSLEKWLKELRENADEKIIVMLVGNKCDLSEQRAVT 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDES 172
+ +A EFA+ + L F+ETSA E+TNV AF T++ EI ++K+ + A +++
Sbjct: 134 SANALEFAKAQNLLFIETSAREATNVNEAFQTLICEIVNKLNKQNVAAEEKA 185
>gi|297839229|ref|XP_002887496.1| hypothetical protein ARALYDRAFT_476500 [Arabidopsis lyrata subsp.
lyrata]
gi|297333337|gb|EFH63755.1| hypothetical protein ARALYDRAFT_476500 [Arabidopsis lyrata subsp.
lyrata]
Length = 232
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 109/217 (50%), Positives = 149/217 (68%), Gaps = 18/217 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LL+RF++DEF DSK TIGVEF + + + K +KAQIWDTAGQER+RA
Sbjct: 18 LIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIKAQIWDTAGQERFRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TS+YYRGA+GA+L+YDIT+R +FDN+ +WL ELR A+ +++LVGNKSDL R V
Sbjct: 78 ITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETVVVLVGNKSDLRQSREVE 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
++ K AE EGL F+ETSALE+ NVE AFL ++ I+ +V+++ A+D +G +++
Sbjct: 138 EDEGKTLAESEGLFFLETSALENVNVEEAFLVMIGRIHEVVTQR--IASDNKSNGAATAH 195
Query: 181 L--KATNIVVP-GQE-----------PESGRRSYNCC 203
+ V+P G+E P S S NCC
Sbjct: 196 INGNGNGTVLPVGKEIVNIHEVTATQPLSS--SSNCC 230
>gi|356531156|ref|XP_003534144.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA6a-like
[Glycine max]
Length = 218
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 105/204 (51%), Positives = 148/204 (72%), Gaps = 5/204 (2%)
Query: 2 IGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTL-VIHHKNVKAQIWDTAGQERYRA 60
IG+S VGKS L++RFA+DEF LDSK +IGVEF + ++ K +KAQIWDTAGQER+RA
Sbjct: 19 IGESGVGKSNLISRFAKDEFRLDSKPSIGVEFAYGNIKLVRDKLIKAQIWDTAGQERFRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TS+YYRGA+GAMLVYDITKR +F NV +WL ELR ++++++LV NKSDL+ R V
Sbjct: 79 ITSSYYRGALGAMLVYDITKRATFVNVGKWLHELREFGGEDMVVVLVRNKSDLDQSRQVE 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E K FAE EGLCFMETSAL++ NV+ AF ++T+I+ I+S+K+L E++ G++
Sbjct: 139 REKGKGFAETEGLCFMETSALQNLNVDEAFXEMITKIHDIISQKSL----ETKMNGAALN 194
Query: 181 LKATNIVVPGQEPESGRRSYNCCT 204
L + + E + +++ CC+
Sbjct: 195 LPSGKEIHIADEVTATKQAKYCCS 218
>gi|67970463|dbj|BAE01574.1| unnamed protein product [Macaca fascicularis]
Length = 461
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 96/141 (68%), Positives = 118/141 (83%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSAL 141
T++A+ FAEK L F+ +L
Sbjct: 136 TDEARAFAEKNNLSFIRDLSL 156
>gi|351696645|gb|EHA99563.1| Ras-related protein Rab-25 [Heterocephalus glaber]
Length = 212
Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 109/203 (53%), Positives = 139/203 (68%), Gaps = 10/203 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGK+ LL+RF R+EFS DS+ TIGVEF T+T+++ +KAQIWDTAG E YR
Sbjct: 17 LIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLELYRG 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
T YYRGAVGA+LV+D+TK Q++ V RWL+EL HA+ I++MLVGNKSDL R VP
Sbjct: 77 -TRRYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAE GL F+ETSAL+STNVELAF TVL EI+ VSK+ + S+
Sbjct: 136 TDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ--------RQNSTRSI 187
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
GQ+P G + CC
Sbjct: 188 PITLGNAQAGQDPSPGEKR-PCC 209
>gi|15219515|ref|NP_177505.1| RAB GTPase A6a [Arabidopsis thaliana]
gi|75333591|sp|Q9C9U7.1|RAA6A_ARATH RecName: Full=Ras-related protein RABA6a; Short=AtRABA6a
gi|12324223|gb|AAG52089.1|AC012679_27 putative ras-related GTP-binding protein; 14977-15931 [Arabidopsis
thaliana]
gi|21537030|gb|AAM61371.1| putative ras-related GTP-binding protein [Arabidopsis thaliana]
gi|332197367|gb|AEE35488.1| RAB GTPase A6a [Arabidopsis thaliana]
Length = 233
Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 105/214 (49%), Positives = 145/214 (67%), Gaps = 11/214 (5%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDSAVGKS LL+RF++DEF DSK TIGVEF + + + K +KAQIWDTAGQER+RA
Sbjct: 18 LIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIKAQIWDTAGQERFRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TS+YYRGA+GA+L+YDIT+R +FDN+ +WL ELR A+ +++LVGNKSDL R V
Sbjct: 78 ITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETVVVLVGNKSDLRQSREVE 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDES-------E 173
++ K AE EGL F+ETSALE+ NVE AFL ++ I+ +V+++ + N +
Sbjct: 138 EDEGKTLAESEGLYFLETSALENVNVEEAFLVMIGRIHEVVTQRIASENKSNGAATPHIN 197
Query: 174 SGGSSSLLKATNIVVPGQEPESGR----RSYNCC 203
G+ ++L +V E + + S NCC
Sbjct: 198 GNGNGTVLPVGKEIVNIHEVTATQPLLSSSSNCC 231
>gi|340504982|gb|EGR31367.1| hypothetical protein IMG5_111720 [Ichthyophthirius multifiliis]
Length = 175
Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 97/153 (63%), Positives = 126/153 (82%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDS VGK+ +L+RF +DEFS++SK TIGVEF TKT++ +K +KAQIWDTAGQE+YRA
Sbjct: 16 IIGDSGVGKTNILSRFTKDEFSIESKPTIGVEFATKTVLNDNKLIKAQIWDTAGQEKYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T+AYYRGAVGA+ ++DITK+ +FDN+ +WL EL+ +AD NI+IMLVGNK DL RAV
Sbjct: 76 ITNAYYRGAVGALTLFDITKQNTFDNLQKWLNELKENADPNIVIMLVGNKCDLNENRAVK 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTV 153
TEDA FAE+ L ++ETSAL+STNV+ AF V
Sbjct: 136 TEDASAFAERNQLAYIETSALDSTNVDEAFQRV 168
>gi|357521613|ref|XP_003631095.1| Ras-related protein Rab-11A [Medicago truncatula]
gi|355525117|gb|AET05571.1| Ras-related protein Rab-11A [Medicago truncatula]
Length = 265
Score = 209 bits (531), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 102/168 (60%), Positives = 132/168 (78%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RFA+DEF LDSK TIGVEF + + + K +KAQIWDTAGQER+RA
Sbjct: 19 LIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQIWDTAGQERFRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TS+YYRGA+GA+LVYDIT+R S+++V RWL ELR + ++++LVGNK DL R V
Sbjct: 79 ITSSYYRGALGALLVYDITRRSSYESVGRWLVELREFGGEEMVVILVGNKCDLGESREVE 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTA 168
E+AK FAE EGLCFMETSAL++ NVE FL ++T I+ I ++++L A
Sbjct: 139 EEEAKRFAEAEGLCFMETSALKNLNVEQVFLQMITTIFDITNQRSLDA 186
>gi|46559001|emb|CAG27070.1| small GTPase [Medicago sativa]
Length = 218
Score = 208 bits (530), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 102/168 (60%), Positives = 132/168 (78%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RFA+DEF LDSK TIGVEF + + + K +KAQIWDTAGQER+RA
Sbjct: 20 LIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQIWDTAGQERFRA 79
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TS+YYRGA+GA+LVYDIT+R S+++V RWL ELR + ++++LVGNK DL R V
Sbjct: 80 ITSSYYRGALGALLVYDITRRSSYESVGRWLVELREFGGEEMVVILVGNKCDLGESREVE 139
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTA 168
E+AK FAE EGLCFMETSAL++ NVE FL ++T I+ I ++++L A
Sbjct: 140 EEEAKGFAEAEGLCFMETSALKNLNVEQVFLQMITTIFDITNQRSLDA 187
>gi|156406695|ref|XP_001641180.1| predicted protein [Nematostella vectensis]
gi|156228318|gb|EDO49117.1| predicted protein [Nematostella vectensis]
Length = 234
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 107/209 (51%), Positives = 143/209 (68%), Gaps = 6/209 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+R+ ++EF L SKATIGVE + + I K V+AQIWDTAGQERYRA
Sbjct: 23 LIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQIWDTAGQERYRA 82
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGA+GA+LVYDI K SF N+ +W+EELR HA ++ I+L+GNKSDL+ LR +
Sbjct: 83 ITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGNKSDLKHLRMIE 142
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDES--ESGGSS 178
K+FA + G+ FMETSAL+STNV AF + I+ V + L + ++ + G S
Sbjct: 143 NRRGKQFAAEHGMLFMETSALDSTNVAEAFEFIFAHIFDKVRQNELEKSGQAHEKPNGES 202
Query: 179 SLLKATNIVVP----GQEPESGRRSYNCC 203
++KA +P G+E R+S +CC
Sbjct: 203 IVIKAELAELPATPNGKEHARTRQSKSCC 231
>gi|340500435|gb|EGR27312.1| ras oncogene family protein, putative [Ichthyophthirius
multifiliis]
Length = 246
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 94/155 (60%), Positives = 124/155 (80%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF +D+F D K TIGVEF T++++ +K +KAQIWDTAGQERY++
Sbjct: 18 LIGDSNVGKSNLLSRFTKDQFFQDQKTTIGVEFATRSIITDNKLIKAQIWDTAGQERYKS 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T+AYYRGAVGA+L+YDITK SF N+ +WL E+R HA+ +I+IMLVGNKSDL+ LR V
Sbjct: 78 ITTAYYRGAVGALLIYDITKYLSFTNIQKWLNEIRDHAEPHIVIMLVGNKSDLKHLRQVK 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLT 155
E+A FAE + F+E SAL+S+NVEL+F ++T
Sbjct: 138 QEEATLFAENNNIAFIEASALDSSNVELSFYRLIT 172
>gi|412990280|emb|CCO19598.1| unknown [Bathycoccus prasinos]
Length = 212
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 131/175 (74%), Gaps = 15/175 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS +L+RF R+EFS++SK+TIGVEF T+++ I K VKAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNILSRFTRNEFSVESKSTIGVEFATRSIEIEKKVVKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKR---------------QSFDNVARWLEELRGHADKNIIIM 105
+TSAYYRGAVGA+LVYD+TK+ ++F +V +WL ELR HAD I+IM
Sbjct: 76 ITSAYYRGAVGALLVYDVTKKGTAITKEIKLISYSLETFADVEKWLAELRDHADSKIVIM 135
Query: 106 LVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRI 160
L GNK DL+ LR+V T+DA+ +A KE L F+ETSAL S N++ AF VL+ I+ +
Sbjct: 136 LTGNKCDLQHLRSVTTQDAEIYAAKEDLLFLETSALNSVNIDAAFQKVLSVIHEV 190
>gi|168048429|ref|XP_001776669.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162671961|gb|EDQ58505.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 161
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/164 (63%), Positives = 127/164 (77%), Gaps = 8/164 (4%)
Query: 43 KNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNI 102
K +KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDITK +++NV RWL+ELR HAD NI
Sbjct: 5 KTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNI 64
Query: 103 IIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVS 162
+IMLVGNKSDL+ LR V T+DA+ F+EKEGL F+ETSALESTNVE AF +LTEIYRIVS
Sbjct: 65 VIMLVGNKSDLKHLRGVSTDDAQAFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVS 124
Query: 163 KKALTANDESESGGSSSLLKATNIV-VPGQEPESGRRSYNCCTS 205
KKAL + + + G + TNIV + P+ + CC++
Sbjct: 125 KKALASEENTTEGPG----QGTNIVPLDSNAPDLKK---GCCSA 161
>gi|426379449|ref|XP_004056410.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Gorilla gorilla
gorilla]
Length = 198
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/205 (55%), Positives = 143/205 (69%), Gaps = 27/205 (13%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T++A+ FAE AF T+LTEIYRIVS+K ++ E++
Sbjct: 136 TDEARAFAEA------------------AFQTILTEIYRIVSQKQMSDRREND------- 170
Query: 181 LKATNIVVPGQEPES--GRRSYNCC 203
+ +N VVP P + + CC
Sbjct: 171 MSPSNNVVPIHVPPTTENKPKVQCC 195
>gi|307107707|gb|EFN55949.1| hypothetical protein CHLNCDRAFT_48772 [Chlorella variabilis]
Length = 222
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 101/174 (58%), Positives = 126/174 (72%), Gaps = 3/174 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGK+ L+RF R EF SK TIGVEF TK L I +K QIWDTAGQERYRA
Sbjct: 19 LIGDSGVGKTNCLSRFCRGEFQASSKPTIGVEFATKALTIEGDLIKCQIWDTAGQERYRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T+AYYRGAVGA+LVYD+T+ SF+++ RWL ELR HA ++++MLVGNK+DL R V
Sbjct: 79 ITNAYYRGAVGALLVYDVTRASSFESIPRWLNELREHASSDMVVMLVGNKTDLVDQRDVS 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL---TANDE 171
+ +E A++EGL F+ETSAL+ +NVE AF V EI+ IV K+ L A DE
Sbjct: 139 MQQGQELAQREGLLFIETSALDGSNVEQAFSRVAAEIHGIVRKRRLESQAAEDE 192
>gi|1370152|emb|CAA98182.1| RAB11F [Lotus japonicus]
Length = 218
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 149/204 (73%), Gaps = 4/204 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS L++RFA+DEF LDSK TIGVEF + + + K +KAQIWDTAGQER+RA
Sbjct: 18 LIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQIWDTAGQERFRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TS+YYRGA+G MLVYDIT+R +F NV +WL ELR +++++++LV NKSDL R V
Sbjct: 78 ITSSYYRGALGPMLVYDITRRPTFMNVIKWLHELREFGNEDMVVVLVANKSDLVQSREVE 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+ +EFAE EGLCFMETSAL++ NVE AFL ++T+I+ I+S+K+L E++ G ++L
Sbjct: 138 KEEGEEFAEIEGLCFMETSALQNLNVEEAFLEMITKIHDIISQKSL----ETKMNGPTTL 193
Query: 181 LKATNIVVPGQEPESGRRSYNCCT 204
+ + + + NCC+
Sbjct: 194 SVPIGKEIQVADEVTATKQANCCS 217
>gi|403345507|gb|EJY72124.1| hypothetical protein OXYTRI_06879 [Oxytricha trifallax]
Length = 266
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 141/190 (74%), Gaps = 8/190 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL R+ +++F ++S++TIGVEF T+++ + + V+AQIWDTAGQERYRA
Sbjct: 19 LIGDSGVGKSNLLLRYTKNQFKINSQSTIGVEFATRSIQVEDQFVRAQIWDTAGQERYRA 78
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T+AYYR AVGA+LVYDITK ++ N+ RW+ ELR HA+ +I ++LVGNKSDL++ RAV
Sbjct: 79 ITNAYYRNAVGALLVYDITKYNTYQNIERWITELREHAEYSISVLLVGNKSDLKSQRAVS 138
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKA--------LTANDES 172
E+A +A+ + F+ETSAL++TNVE+AF+ V+ +IY+ K+ T N++
Sbjct: 139 FEEANAYAKNNNIHFIETSALDATNVEIAFVKVIQDIYQTQIKEGQDDNNQDQYTQNNDQ 198
Query: 173 ESGGSSSLLK 182
+ G +S L+
Sbjct: 199 NNKGDNSTLR 208
>gi|397628535|gb|EJK68942.1| hypothetical protein THAOC_09841 [Thalassiosira oceanica]
Length = 229
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/183 (56%), Positives = 134/183 (73%), Gaps = 5/183 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHH-KNVKAQIWDTAGQERYR 59
L+GDS VGKS L+ RF ++EF+ DSK+TIGVEF TKT+ I K VKAQIWDTAGQERYR
Sbjct: 14 LLGDSGVGKSNLVFRFTKNEFNKDSKSTIGVEFATKTVQIEDDKLVKAQIWDTAGQERYR 73
Query: 60 AVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAV 119
++ S+YYRGAVGA+LVYD+T R SF++V WL+E+ +A+K+ +IMLVGNK DL R V
Sbjct: 74 SIASSYYRGAVGALLVYDVTDRNSFNHVPMWLKEVEENAEKDCLIMLVGNKMDLHEQRTV 133
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSS 179
D + FA K GL F+ETSAL++T V+ AF +L EIY+ +KK L +S+ GG +
Sbjct: 134 FVRDGRSFARKNGLAFIETSALDATGVDTAFQRILQEIYKTQTKKQL----KSQGGGGKA 189
Query: 180 LLK 182
K
Sbjct: 190 PAK 192
>gi|403370738|gb|EJY85236.1| Rab11A, RAB family GTPase [Oxytricha trifallax]
Length = 249
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 93/175 (53%), Positives = 139/175 (79%), Gaps = 2/175 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTL-VIHHKNVKAQIWDTAGQERYR 59
++GDS VGKS LL R+ ++EF+++S T+G+EF TKT+ ++ ++AQIWDT GQERYR
Sbjct: 13 MLGDSGVGKSNLLMRYTKNEFNVNSTMTMGIEFATKTIQTAQNQIIRAQIWDTCGQERYR 72
Query: 60 AVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAV 119
++TSAYYRGAVGA++VYD+T ++SFDNV WL+ELR A+ NI+++LVGNK DL+ R V
Sbjct: 73 SLTSAYYRGAVGALMVYDVTSQKSFDNVQVWLKELRQFAESNIVVLLVGNKIDLKDKREV 132
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESES 174
EDA +FA+++G+ F+ETSALE +NV++AF ++ EI+R+V++++ T D E+
Sbjct: 133 RKEDASQFAQEQGIAFIETSALECSNVDIAFERIIYEIHRVVAQQS-TQQDTQEA 186
>gi|403339931|gb|EJY69227.1| Rab11A, RAB family GTPase [Oxytricha trifallax]
Length = 231
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/213 (48%), Positives = 149/213 (69%), Gaps = 10/213 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHH-KNVKAQIWDTAGQERYR 59
LIGDS VGKS LL+RF ++EF+L+SKATIGVEF TK+ + + ++VK QIWDTAGQERYR
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFNLESKATIGVEFATKSFSLENGQSVKVQIWDTAGQERYR 77
Query: 60 AVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAV 119
A+T+ YYRGAVGA+LVYDITK ++F++V RWL+EL +A+ I+I+LVGNK+DL LR V
Sbjct: 78 AITNTYYRGAVGALLVYDITKMKTFESVDRWLQELHQYAESGIVILLVGNKTDLHKLREV 137
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSS 179
E+A EFA + L F+ETSAL S+NV+ AF ++ +I++ S + + + + ++ S
Sbjct: 138 KREEAAEFASLKNLAFIETSALVSSNVDEAFDLLIQQIHKEASSRLIVPDKDEQNKNQRS 197
Query: 180 ----LLKATNIVVPGQEPESGRRSYN-----CC 203
+ K + + Q ++ +R + CC
Sbjct: 198 KSMEMKKGKGVQLHEQNQDNNKRGNSKVRGRCC 230
>gi|403357125|gb|EJY78180.1| Ras-related protein RABA2a [Oxytricha trifallax]
Length = 266
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 94/162 (58%), Positives = 127/162 (78%), Gaps = 1/162 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHK-NVKAQIWDTAGQERYR 59
LIGD+ VGKS LL R+ +++F ++S++TIGVEF T+ L + VKAQIWDTAGQERYR
Sbjct: 20 LIGDAGVGKSNLLLRYTKNQFKINSQSTIGVEFATRNLKMGDDCYVKAQIWDTAGQERYR 79
Query: 60 AVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAV 119
A+T+AYYR AVGA++VYDI+K SF+N+ +W++ELR HAD NI I L+GNKSDL+ LRAV
Sbjct: 80 AITNAYYRNAVGALMVYDISKPNSFENIQKWMQELRDHADSNIAITLIGNKSDLKHLRAV 139
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIV 161
EDA++ A+ + F+ETSAL S NV+ AF+ ++ EIYR+
Sbjct: 140 KFEDAQKLAQTYQIPFIETSALNSMNVDAAFMNLINEIYRLT 181
>gi|300174998|emb|CBK20309.2| unnamed protein product [Blastocystis hominis]
Length = 183
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 91/157 (57%), Positives = 124/157 (78%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGK+ +L+RFA DEF+LDSKAT+GVEF K + +++ +KAQIWDTAGQERYR+
Sbjct: 22 LIGDSNVGKTNILSRFANDEFNLDSKATVGVEFSAKCVKVNNSIIKAQIWDTAGQERYRS 81
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDIT R SF+NV WL ELR H+D +++++L+GNK DL R++
Sbjct: 82 ITSAYYRGAVGALMVYDITSRSSFENVEGWLSELRQHSDGDMVVVLIGNKCDLANQRSIS 141
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEI 157
T++A+ +AEK + F+ETSA E T ++ AF VL +
Sbjct: 142 TDEARAYAEKHNMAFIETSAYERTGIDEAFTMVLKRL 178
>gi|403370433|gb|EJY85078.1| Rab-type small GTPase [Oxytricha trifallax]
Length = 254
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 94/163 (57%), Positives = 129/163 (79%), Gaps = 1/163 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNV-KAQIWDTAGQERYR 59
+IGDS VGKS LL R+ + +F+++SK TIGVEF TK++ K V KAQIWDTAGQERYR
Sbjct: 18 MIGDSGVGKSNLLMRYTKGDFNIESKTTIGVEFATKSIKTQDKKVVKAQIWDTAGQERYR 77
Query: 60 AVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAV 119
A+T+AYYRGAVGA+LVYD+T SF +V+ WL+EL+ +AD NI+I+LVGNK+DL+ R V
Sbjct: 78 AITNAYYRGAVGALLVYDVTCMDSFQHVSNWLKELKQYADSNIVILLVGNKTDLKDKREV 137
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVS 162
E+A +A++ L F+ETSAL+ +NV+LAF ++ EIY+++S
Sbjct: 138 RKEEAAAYADQHSLAFIETSALDCSNVDLAFDRIINEIYKVIS 180
>gi|7508981|pir||T26168 hypothetical protein W04G5.2 - Caenorhabditis elegans
Length = 212
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 96/164 (58%), Positives = 131/164 (79%), Gaps = 2/164 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+ VGKS LL+RF R+EF+L SK TIGVEF TK + + K VK QIWDTAG ER+R
Sbjct: 27 LIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIWDTAGMERFRC 86
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
S+YYRGA+GA+LVYDI+K +++++V +WL+ LR HA+++I+I LVGNKSDL AVP
Sbjct: 87 GASSYYRGALGALLVYDISKHKTYESVEQWLKVLRDHANEDIVITLVGNKSDLS--HAVP 144
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKK 164
T++AK +AE+ + F+ETSAL++TNVE AF ++TEIY++VS+K
Sbjct: 145 TDEAKIYAERNHISFIETSALDNTNVEAAFTNIVTEIYKLVSEK 188
>gi|392887275|ref|NP_001251691.1| Protein RAB-11.2, isoform a [Caenorhabditis elegans]
gi|90185954|emb|CAJ85753.1| Protein RAB-11.2, isoform a [Caenorhabditis elegans]
Length = 198
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 96/164 (58%), Positives = 131/164 (79%), Gaps = 2/164 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+ VGKS LL+RF R+EF+L SK TIGVEF TK + + K VK QIWDTAG ER+R
Sbjct: 13 LIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIWDTAGMERFRC 72
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
S+YYRGA+GA+LVYDI+K +++++V +WL+ LR HA+++I+I LVGNKSDL AVP
Sbjct: 73 GASSYYRGALGALLVYDISKHKTYESVEQWLKVLRDHANEDIVITLVGNKSDLS--HAVP 130
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKK 164
T++AK +AE+ + F+ETSAL++TNVE AF ++TEIY++VS+K
Sbjct: 131 TDEAKIYAERNHISFIETSALDNTNVEAAFTNIVTEIYKLVSEK 174
>gi|403300397|ref|XP_003940927.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Saimiri
boliviensis boliviensis]
Length = 155
Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 93/130 (71%), Positives = 113/130 (86%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEK 130
T++A+ FAEK
Sbjct: 136 TDEARAFAEK 145
>gi|332205939|ref|NP_001193765.1| ras-related protein Rab-11A isoform 2 [Homo sapiens]
gi|332235942|ref|XP_003267164.1| PREDICTED: ras-related protein Rab-11A isoform 3 [Nomascus
leucogenys]
gi|332844085|ref|XP_003314767.1| PREDICTED: uncharacterized protein LOC453523 isoform 1 [Pan
troglodytes]
gi|397515598|ref|XP_003828036.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Pan paniscus]
gi|402874625|ref|XP_003901133.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Papio anubis]
gi|426379451|ref|XP_004056411.1| PREDICTED: ras-related protein Rab-11A isoform 3 [Gorilla gorilla
gorilla]
gi|194390126|dbj|BAG61825.1| unnamed protein product [Homo sapiens]
Length = 155
Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 93/130 (71%), Positives = 113/130 (86%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEK 130
T++A+ FAEK
Sbjct: 136 TDEARAFAEK 145
>gi|47212961|emb|CAF93372.1| unnamed protein product [Tetraodon nigroviridis]
Length = 170
Score = 202 bits (515), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 98/156 (62%), Positives = 123/156 (78%), Gaps = 2/156 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGKS LL+RF ++EF+ DS+ TIGVEF T+T+ ++ VKAQIWDTAG ERYRA
Sbjct: 15 LIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVQLNQYTVKAQIWDTAGLERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI+K ++++ RWL+EL HAD +I++MLVGNK DLE LR VP
Sbjct: 75 ITSAYYRGAVGALLVYDISKHLTYESTERWLKELYEHADPHIVVMLVGNKRDLENLRTVP 134
Query: 121 TEDAKEF--AEKEGLCFMETSALESTNVELAFLTVL 154
+E +E +GL FMETSAL+STNVE AF VL
Sbjct: 135 SEGGPGLCRSEAKGLMFMETSALDSTNVEAAFNEVL 170
>gi|300176554|emb|CBK24219.2| unnamed protein product [Blastocystis hominis]
Length = 281
Score = 202 bits (515), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 90/161 (55%), Positives = 126/161 (78%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGD+ VGK+ +L R+A++EF D+K+T+GVEF +K + I +K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDTGVGKTNILTRYAKNEFYTDTKSTVGVEFASKCVTIDNKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDIT R +FDN+ WL EL ++D ++ I+LVGNK DL LR +
Sbjct: 76 ITSAYYRGAVGALLVYDITVRSTFDNIGVWLAELSHYSDNDMTIVLVGNKCDLANLRVIE 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIV 161
+++A +FAE+ + F+ETSA +ST ++ AF T+L+ IY +
Sbjct: 136 SQEAVQFAEQHNIAFIETSAYDSTGIDKAFETILSGIYTCI 176
>gi|449677940|ref|XP_002159779.2| PREDICTED: ras-related protein Rab-11B-like, partial [Hydra
magnipapillata]
Length = 162
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/163 (62%), Positives = 122/163 (74%), Gaps = 2/163 (1%)
Query: 43 KNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNI 102
K +KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI
Sbjct: 2 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHITYENVERWLKELRDHADANI 61
Query: 103 IIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVS 162
+IMLVGNKSDL LRAVPTE+AK FAEK L F+ETSAL+STNVE+AF +L EIY IVS
Sbjct: 62 VIMLVGNKSDLRHLRAVPTEEAKAFAEKNELSFIETSALDSTNVEVAFRNILEEIYHIVS 121
Query: 163 KKALTANDESESGGSSSLLKATNIVVPGQEPESGRRSYNCCTS 205
+K + N + +G S T V P E + R+S CC +
Sbjct: 122 QKQI-HNASNRTGNQPSDNVQTIQVAPTVEIDQ-RKSVKCCQT 162
>gi|403366976|gb|EJY83296.1| Ras-like protein Rab-11A [Oxytricha trifallax]
Length = 255
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 90/160 (56%), Positives = 122/160 (76%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
L+GDS VGKS LL RF ++EF + + TIGVEF TK++ I + VKAQIWDTAGQERYRA
Sbjct: 18 LVGDSGVGKSNLLMRFVKNEFHQNMQTTIGVEFSTKSMQIEGQLVKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T AYYR AVGA+L+YDIT RQSF+N+ +W EL H++ N +++LVGNK DL RA+
Sbjct: 78 LTHAYYRNAVGALLIYDITDRQSFENLKKWQSELANHSEANTVMILVGNKCDLSDQRAIK 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRI 160
E+A++FA+ + F+ETSAL + NV +AF ++TEI++I
Sbjct: 138 IEEAEKFAQSNNMAFIETSALNAKNVNIAFKNLITEIFKI 177
>gi|148678258|gb|EDL10205.1| mCG22989, isoform CRA_a [Mus musculus]
Length = 149
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 92/130 (70%), Positives = 113/130 (86%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEK 130
T++A+ FAE+
Sbjct: 136 TDEARAFAEQ 145
>gi|149391443|gb|ABR25739.1| ras-related protein rab11b [Oryza sativa Indica Group]
Length = 165
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/170 (58%), Positives = 124/170 (72%), Gaps = 5/170 (2%)
Query: 37 TLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRG 96
++ + K VKAQIWDTAGQERYRA+TSAYYRGAVGA++VYD+T+ +F+NV RW+ EL+
Sbjct: 1 SIHVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKD 60
Query: 97 HADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTE 156
H D NI+IMLVGNK+DL LRAV TEDAK FAEKE FMETSALES NVE AF VLT+
Sbjct: 61 HTDANIVIMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQ 120
Query: 157 IYRIVSKKALTANDESESGGSSSLLKATNIVVPGQEPESGRRSYNCCTSS 206
IY +VSKKAL D+ ++ K I V G++ S + CC+S+
Sbjct: 121 IYHVVSKKALDIGDD-----PAAPPKGQTINVGGKDDVSAVKKSACCSSA 165
>gi|148908271|gb|ABR17250.1| unknown [Picea sitchensis]
Length = 214
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/179 (54%), Positives = 130/179 (72%), Gaps = 3/179 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
GDS+VGKS +++R R+ FS K T+GVEF T+ K + AQIWDT G ERY +
Sbjct: 17 FTGDSSVGKSNIISRLTRNYFSHQCKPTVGVEFGIYTIQDKGKTIAAQIWDTCGLERYAS 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
T + YRG GA+LVYDIT+R++F+NV +WL+ELR HA+ N +IML+GNKSDL+ LR+V
Sbjct: 77 FTKSCYRGVAGAVLVYDITRRRTFENVGKWLKELRDHANSNPVIMLIGNKSDLQHLRSVS 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSS 179
TEDA++FAEKEGL FMETSA +STNV+ A +L EI+R+ S+K L + ES G S+
Sbjct: 137 TEDAQKFAEKEGLLFMETSAFKSTNVDKALQIILQEIHRVFSEKELHS---EESNGVST 192
>gi|145549438|ref|XP_001460398.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834400|emb|CAI44535.1| rab_B27 [Paramecium tetraurelia]
gi|124428228|emb|CAK93001.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/203 (49%), Positives = 141/203 (69%), Gaps = 13/203 (6%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGK+ +L +F R EF DSK TIGVEF +K ++I K VKAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKTNILNQFTRGEFLQDSKTTIGVEFASKNIMIDDKTVKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGAM++YDITK +F+NV +W++EL+ +AD ++ IM+VGNK+D + +R V
Sbjct: 76 ITSAYYRGAVGAMIIYDITKSLTFENVDKWMKELKENADPSLQIMIVGNKTDQKHIRQVA 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T+ A +A++ G+ F+ETSA + TNVE AF +L +IY+ S K + + + +
Sbjct: 136 TDCAIAYAQRNGVAFIETSAKDGTNVEDAFKNILQQIYK--SAKVVKPTPQP----TKFV 189
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ T++V P +S CC
Sbjct: 190 VADTDVVKP-------EKSSGCC 205
>gi|225705282|gb|ACO08487.1| Ras-related protein Rab-11B [Oncorhynchus mykiss]
Length = 150
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 91/135 (67%), Positives = 114/135 (84%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R++F+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNDFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IML GNKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLAGNKSDLRHLRAVP 135
Query: 121 TEDAKEFAEKEGLCF 135
T++A+ FAEK + +
Sbjct: 136 TDEARAFAEKNTILY 150
>gi|291233885|ref|XP_002736881.1| PREDICTED: Ras-related protein Rab-11A-like, partial [Saccoglossus
kowalevskii]
Length = 145
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 92/130 (70%), Positives = 112/130 (86%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R+EF+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 7 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 66
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IMLVGNKSDL LRAVP
Sbjct: 67 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVP 126
Query: 121 TEDAKEFAEK 130
T++AK FA +
Sbjct: 127 TDEAKAFAGR 136
>gi|307777776|dbj|BAJ21284.1| Rab-family small GTPase Rab11C [Tetrahymena thermophila]
Length = 221
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 91/158 (57%), Positives = 123/158 (77%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS L++RF +D+FS++ + TIGVEF TKT+ I K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSCLISRFTKDQFSMEQQPTIGVEFSTKTIKISDKIIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGA GA++V+DITK+ SF+N+A+W +EL+ H+D I+ ML+GNK DL R +
Sbjct: 78 ITSAYYRGAAGALIVFDITKQTSFENLAKWYKELQEHSDVQIVTMLIGNKCDLADQRNIS 137
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIY 158
+ A +FA++ + ++ETSAL STNVE AF ++ IY
Sbjct: 138 KDAASKFAQEYDMAYLETSALHSTNVEQAFHQIIKYIY 175
>gi|357512579|ref|XP_003626578.1| Ras-related GTP-binding protein [Medicago truncatula]
gi|355501593|gb|AES82796.1| Ras-related GTP-binding protein [Medicago truncatula]
Length = 232
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 98/170 (57%), Positives = 125/170 (73%), Gaps = 16/170 (9%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGK+Q+L+RFA++EF DSK+TIGVEFQT+T+ I+ K +KAQIWDTAGQERYRA
Sbjct: 45 VIGDSAVGKTQMLSRFAKNEFCFDSKSTIGVEFQTRTVTINGKLIKAQIWDTAGQERYRA 104
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VTSAYYRGA+GAMLVYDITKRQ+FD+VARW+EELR HAD +I+IML+GNK DL R V
Sbjct: 105 VTSAYYRGALGAMLVYDITKRQTFDHVARWIEELRSHADNSIVIMLIGNKGDLVDQRVVH 164
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTAND 170
T+ G F+ +I ++VSK++L +N+
Sbjct: 165 TDKCCGVCRGSGPFFLRD----------------FKINKVVSKRSLESNN 198
>gi|328872576|gb|EGG20943.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 238
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/172 (56%), Positives = 132/172 (76%)
Query: 16 FARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLV 75
F R+EF+L++K+TIGVEF T+++ K +KAQIWDTAGQERYRA+TSAYYRGAVGA+LV
Sbjct: 14 FTRNEFNLETKSTIGVEFATRSIETEGKIIKAQIWDTAGQERYRAITSAYYRGAVGALLV 73
Query: 76 YDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCF 135
YDI K+ ++ +V RWL ELR +AD+NI IMLVGNK+DL LR V T++AK+FAEK L F
Sbjct: 74 YDIAKQATYKSVERWLTELRENADRNIEIMLVGNKNDLRHLREVSTDEAKDFAEKHKLSF 133
Query: 136 METSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSLLKATNIV 187
+ETSAL+S+NVE+AF T+LT+I ++++ + +S L A +I+
Sbjct: 134 IETSALDSSNVEIAFQTILTQICHSMNRQPSISGGQSGEAALKHLEHALDII 185
>gi|224002539|ref|XP_002290941.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972717|gb|EED91048.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 172
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 98/165 (59%), Positives = 126/165 (76%), Gaps = 1/165 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHH-KNVKAQIWDTAGQERYR 59
L+GDS VGKS L+ RF ++EF+ DSK+TIGVEF TKT+ I K VKAQIWDTAGQERYR
Sbjct: 7 LLGDSGVGKSNLVFRFTKNEFNKDSKSTIGVEFATKTVQIEDDKLVKAQIWDTAGQERYR 66
Query: 60 AVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAV 119
++ S+YYRGAVGA+LVYD+T R SF++V WL+E+ +A+K+ +IMLVGNK DL R V
Sbjct: 67 SIASSYYRGAVGALLVYDVTDRNSFNHVPMWLKEVEENAEKDCLIMLVGNKMDLHEQRTV 126
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKK 164
D + FA K GL F+ETSAL++T V+ AF +L EIY+ +KK
Sbjct: 127 FVRDGRSFARKNGLAFIETSALDATGVDTAFQRILQEIYKTQTKK 171
>gi|407043687|gb|EKE42089.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 207
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 103/203 (50%), Positives = 137/203 (67%), Gaps = 9/203 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGKS LL RF R+EF + ++TIGVEF T+++ K ++AQIWDTAGQERYRA
Sbjct: 14 LIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T+AYYRGAVGA++VYDITK +F ++ RWL EL+ +AD I+IM++GNK+DL R V
Sbjct: 74 ITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMIIGNKADLAQTREVE 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
AKEF +K+ L F ETSAL+ TNVE AF ++L EI+ K+ +A +ES + +
Sbjct: 134 EATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIF----KQNASAVEESSNDKPTEK 189
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
VVP EP CC
Sbjct: 190 PD----VVP-IEPSPKENKGGCC 207
>gi|67462573|ref|XP_647948.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|50978618|dbj|BAD34976.1| EhRab11A protein [Entamoeba histolytica]
gi|56463710|gb|EAL42562.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449707698|gb|EMD47312.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 207
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 103/203 (50%), Positives = 137/203 (67%), Gaps = 9/203 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGKS LL RF R+EF + ++TIGVEF T+++ K ++AQIWDTAGQERYRA
Sbjct: 14 LIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T+AYYRGAVGA++VYDITK +F ++ RWL EL+ +AD I+IM++GNK+DL R V
Sbjct: 74 ITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMIIGNKADLAQTREVE 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
AKEF +K+ L F ETSAL+ TNVE AF ++L EI+ K+ +A +ES + +
Sbjct: 134 EATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIF----KQNASAVEESSNDKPAEK 189
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
VVP EP CC
Sbjct: 190 PD----VVP-IEPSPKENKGGCC 207
>gi|145510136|ref|XP_001441001.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834514|emb|CAI44569.1| rab_A27 [Paramecium tetraurelia]
gi|124408240|emb|CAK73604.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 141/203 (69%), Gaps = 13/203 (6%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGK+ +L +F R EF DSK TIGVEF +K +++ K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKTNILNQFTRGEFLQDSKTTIGVEFASKNVILDDKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGAM++YDITK +F+NV +W++EL+ +AD ++ IM+VGNK+D + +R V
Sbjct: 76 ITSAYYRGAVGAMIIYDITKSLTFENVDKWMKELKENADPSLQIMIVGNKTDQKHIRQVA 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T+ A +A++ G+ F+ETSA + TNVE AF +L +IY+ S K + + + +
Sbjct: 136 TDCAIAYAQRNGVAFIETSAKDGTNVEDAFKNILQQIYK--SAKVVKPTPQP----TKFV 189
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ T++V P +S CC
Sbjct: 190 VADTDVVKP-------EKSSGCC 205
>gi|2623643|gb|AAB86480.1| GTP-binding protein [Entamoeba histolytica]
Length = 206
Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 103/203 (50%), Positives = 137/203 (67%), Gaps = 9/203 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGKS LL RF R+EF + ++TIGVEF T+++ K ++AQIWDTAGQERYRA
Sbjct: 13 LIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRAQIWDTAGQERYRA 72
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T+AYYRGAVGA++VYDITK +F ++ RWL EL+ +AD I+IM++GNK+DL R V
Sbjct: 73 ITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMIIGNKADLAQTREVE 132
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
AKEF +K+ L F ETSAL+ TNVE AF ++L EI+ K+ +A +ES + +
Sbjct: 133 EATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIF----KQNASAVEESSNDKPAEK 188
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
VVP EP CC
Sbjct: 189 PD----VVP-IEPSPKENKGGCC 206
>gi|67474054|ref|XP_652776.1| small GTPase Rab11B [Entamoeba histolytica HM-1:IMSS]
gi|13537447|dbj|BAB40678.1| small GTPase Rab11B [Entamoeba histolytica]
gi|56469662|gb|EAL47390.1| small GTPase Rab11B [Entamoeba histolytica HM-1:IMSS]
gi|449709813|gb|EMD49007.1| small GTPase Rab11B, putative [Entamoeba histolytica KU27]
Length = 211
Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 100/193 (51%), Positives = 134/193 (69%), Gaps = 12/193 (6%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
L+G+S VGKS LL RF R+EF D ++TIGVEF T+++ KN++AQIWDTAGQERYRA
Sbjct: 15 LVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNIRAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T+AYYRGA+GA++VYDITK+ SF++V +WL EL +ADK ++ M++GNK DL R V
Sbjct: 75 ITNAYYRGALGALVVYDITKKTSFESVEKWLAELHENADKKVVQMVIGNKCDLSQTREVQ 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T + +E A+K F ETSAL+ +NVE AF+T+L +IY SK S G S+
Sbjct: 135 TSEGEELAKKNNAFFFETSALDGSNVEEAFMTLLKKIYDDSSK--------SVDGEQSN- 185
Query: 181 LKATNIVVPGQEP 193
TN + P EP
Sbjct: 186 ---TNEIKPATEP 195
>gi|145485861|ref|XP_001428938.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834601|emb|CAI44716.1| rab_A25 [Paramecium tetraurelia]
gi|124396027|emb|CAK61540.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 105/204 (51%), Positives = 146/204 (71%), Gaps = 11/204 (5%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
L GDS VGKS LL RF +++F+ DSK TIGVEF T+++ I K VKAQIWDTAGQERYRA
Sbjct: 16 LSGDSGVGKSNLLLRFTKNQFNADSKTTIGVEFATRSITISGKVVKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T+AYYRGA+GA+LVYDIT +QSF+ V +W++E+R +ADK+I+IM++GNKSDL+ LRA+
Sbjct: 76 ITAAYYRGAIGAVLVYDITNKQSFEAVEQWIQEVRENADKDIVIMIIGNKSDLKHLRAIR 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE ++ A+ + FME SA + TNV+ AF+ ++ +IY+ ++K+ L D+ S L
Sbjct: 136 TESGQDLAQMYKVAFMEASAQDGTNVDQAFIQIIQQIYQNLTKQ-LQKYDQMSHLQSEKL 194
Query: 181 -LKATNIVVPGQEPESGRRSYNCC 203
L+ TN SG + CC
Sbjct: 195 DLEITN---------SGNKKQGCC 209
>gi|407043806|gb|EKE42164.1| small GTPase Rab11B, putative [Entamoeba nuttalli P19]
Length = 211
Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 100/193 (51%), Positives = 134/193 (69%), Gaps = 12/193 (6%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
L+G+S VGKS LL RF R+EF D ++TIGVEF T+++ KN++AQIWDTAGQERYRA
Sbjct: 15 LVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNIRAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T+AYYRGA+GA++VYDITK+ SF++V +WL EL +ADK ++ M++GNK DL R V
Sbjct: 75 ITNAYYRGALGALVVYDITKKTSFESVEKWLAELHENADKKVVQMVIGNKCDLSQTREVQ 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T + +E A+K F ETSAL+ +NVE AF+T+L +IY SK S G S+
Sbjct: 135 TTEGEELAKKNNAFFFETSALDGSNVEEAFMTLLKKIYDDSSK--------SVDGEQSN- 185
Query: 181 LKATNIVVPGQEP 193
TN + P EP
Sbjct: 186 ---TNEIKPATEP 195
>gi|167381877|ref|XP_001735893.1| rab11 [Entamoeba dispar SAW760]
gi|165901950|gb|EDR27906.1| rab11, putative [Entamoeba dispar SAW760]
Length = 211
Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 100/193 (51%), Positives = 133/193 (68%), Gaps = 12/193 (6%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
L+G+S VGKS LL RF R+EF D ++TIGVEF T+++ KN++AQIWDTAGQERYRA
Sbjct: 15 LVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNIRAQIWDTAGQERYRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T+AYYRGA+GA++VYDITK+ SF++V +WL EL +ADK ++ M++GNK DL R V
Sbjct: 75 ITNAYYRGALGALVVYDITKKTSFESVEKWLAELHENADKKVVQMVIGNKCDLNQTREVQ 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T + +E A+K F ETSAL+ +NVE AF+T+L +IY SK S G SS
Sbjct: 135 TSEGEELAKKNNAFFFETSALDGSNVEEAFMTLLKKIYDDSSK--------SVDGEQSS- 185
Query: 181 LKATNIVVPGQEP 193
N + P EP
Sbjct: 186 ---NNEIKPATEP 195
>gi|167378360|ref|XP_001734772.1| rab11 [Entamoeba dispar SAW760]
gi|165903573|gb|EDR29063.1| rab11, putative [Entamoeba dispar SAW760]
Length = 212
Score = 198 bits (504), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 98/177 (55%), Positives = 123/177 (69%), Gaps = 2/177 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IG+S VGKS LL RF R+EF + K TIGVEF T+T+ K ++AQIWDTAGQE+YRA
Sbjct: 13 IIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQIWDTAGQEKYRA 72
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T AYYRGA GAM VYD++K+ SFD + RW+ EL+ D +I IM+VGNK+DL+ R V
Sbjct: 73 ITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGCDSDITIMIVGNKADLKQEREVN 132
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGS 177
T D EFA+K F+ETSALE TNVE AF +L +IY+ K A ND S S
Sbjct: 133 TSDGTEFAQKHSAFFIETSALEGTNVEKAFSDLLIQIYK--KKNATLKNDSVPSDNS 187
>gi|167376392|ref|XP_001733978.1| rab11 [Entamoeba dispar SAW760]
gi|165904707|gb|EDR29887.1| rab11, putative [Entamoeba dispar SAW760]
Length = 231
Score = 198 bits (504), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 91/159 (57%), Positives = 122/159 (76%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGKS LL RF R+EF + ++TIGVEF T+++ K ++AQIWDTAGQERYRA
Sbjct: 38 LIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRAQIWDTAGQERYRA 97
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T+AYYRGAVGA++VYDITK +F ++ RWL EL+ +AD I+IM++GNK+DL R +
Sbjct: 98 ITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMIIGNKADLAQTREIE 157
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYR 159
AKEF +K+ L F ETSAL+ TNVE AF ++L EI++
Sbjct: 158 EATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIFK 196
>gi|312377320|gb|EFR24177.1| hypothetical protein AND_11405 [Anopheles darlingi]
Length = 1044
Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats.
Identities = 92/128 (71%), Positives = 110/128 (85%)
Query: 39 VIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHA 98
++ K +KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI K +++NV RWL ELR HA
Sbjct: 5 MVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHA 64
Query: 99 DKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIY 158
D+NI+IMLVGNKSDL LRAVPT++AK FAE+ GL F+ETSAL+STNVE AF +LTEIY
Sbjct: 65 DQNIVIMLVGNKSDLRHLRAVPTDEAKGFAERNGLSFIETSALDSTNVETAFQNILTEIY 124
Query: 159 RIVSKKAL 166
RIVS+K +
Sbjct: 125 RIVSQKQI 132
>gi|440292583|gb|ELP85770.1| rab11, putative [Entamoeba invadens IP1]
Length = 208
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 93/159 (58%), Positives = 119/159 (74%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGKS LL RF R+EF + ++TIGVEF T+++ K ++AQIWDTAGQERYRA
Sbjct: 14 LIGESGVGKSNLLLRFTRNEFDPEKRSTIGVEFATRSIQHEQKVIRAQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T+AYYRGAVGA++VYDITK SF ++ RWL EL+ +AD I++M+VGNK+DL R V
Sbjct: 74 ITNAYYRGAVGALIVYDITKESSFKSIERWLSELKDNADPKIVVMVVGNKADLSQTREVD 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYR 159
AK F E + L F ETSAL+ TNVE AF +L EIY+
Sbjct: 134 ESTAKTFCENQKLFFFETSALDGTNVETAFKNLLIEIYK 172
>gi|1370158|emb|CAA98185.1| RAB11I [Lotus japonicus]
Length = 163
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/174 (55%), Positives = 126/174 (72%), Gaps = 14/174 (8%)
Query: 35 TKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEEL 94
T+++ IH K VKAQIWDTAGQERYRA+TSAYYRGAVGA++VYD+T++ +F+NV RWL+EL
Sbjct: 1 TRSVRIHDKTVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRQVTFENVQRWLKEL 60
Query: 95 RGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVL 154
R H D NI+IMLVGNK+DL LRAVPTE+A FAE+E FMETSALES NV+ AF+ VL
Sbjct: 61 RDHTDANIVIMLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVL 120
Query: 155 TEIYRIVSKKALTANDES---ESGGSSSLLKATNIVVPGQEPESGRRSYNCCTS 205
+EIY +VS+K L ++ G + +L + + PG CC++
Sbjct: 121 SEIYNVVSRKTLEKGNDPGALPQGQTINLGDVSAVKKPG-----------CCSA 163
>gi|297790260|ref|XP_002863031.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297308833|gb|EFH39290.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 167
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 92/129 (71%), Positives = 106/129 (82%)
Query: 36 KTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELR 95
+ + + K VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDITKRQ+FDNV RWL ELR
Sbjct: 2 RVITVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELR 61
Query: 96 GHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLT 155
HAD NI+IM+ GNK+DL LR+V ED + AE EGL F+ETSALE+TNVE AF TVL
Sbjct: 62 DHADSNIVIMMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLA 121
Query: 156 EIYRIVSKK 164
EIY I+SKK
Sbjct: 122 EIYHIISKK 130
>gi|67466968|ref|XP_649609.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56466088|gb|EAL44223.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449710050|gb|EMD49193.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 212
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/177 (54%), Positives = 123/177 (69%), Gaps = 2/177 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IG+S VGKS LL RF R+EF + K TIGVEF T+T+ K ++AQIWDTAGQE+YRA
Sbjct: 13 IIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQIWDTAGQEKYRA 72
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T AYYRGA GAM VYD++K+ SFD + RW+ EL+ D +I IM+VGNK+DL+ R V
Sbjct: 73 ITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGCDSDITIMIVGNKADLKQEREVN 132
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGS 177
T D EFA+K F+ETSAL+ TNVE AF +L +IY+ K A ND S S
Sbjct: 133 TSDGTEFAQKHSAFFIETSALDGTNVEKAFSDLLIQIYK--KKNATLKNDSVPSDNS 187
>gi|145529147|ref|XP_001450362.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831336|emb|CAI39285.1| rab_B71 [Paramecium tetraurelia]
gi|74833805|emb|CAI39363.1| rab_A71 [Paramecium tetraurelia]
gi|124417973|emb|CAK82965.1| unnamed protein product [Paramecium tetraurelia]
Length = 213
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 89/164 (54%), Positives = 122/164 (74%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGK+ +L RF ++F L+SK TIGVEF TKTL K+VK QIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKTNILKRFINNDFQLESKPTIGVEFATKTLQQSGKSVKCQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T+AYYRGAVGA + YD+T+ +F N +WL EL+ HAD NI+I+++GNK+D RAV
Sbjct: 77 ITNAYYRGAVGAFICYDVTREPTFKNTEKWLAELKEHADGNIVIIMIGNKTDAVDQRAVR 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKK 164
T++A F E++ + F+ETSAL+ TN+++AF ++ I+ + K
Sbjct: 137 TDEASNFCEQQKIGFIETSALDGTNIDVAFNKIVANIFHTIGSK 180
>gi|428673459|gb|EKX74372.1| Ras-related protein rab11 small GTP-binding protein, putative
[Babesia equi]
Length = 221
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/158 (62%), Positives = 117/158 (74%), Gaps = 1/158 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHH-KNVKAQIWDTAGQERYR 59
LIGDS VGKS LL RF + F LDSK+TIGVEF TK + + + K KAQIWDTAGQERYR
Sbjct: 15 LIGDSNVGKSNLLDRFVKGTFKLDSKSTIGVEFATKNVQLRNGKIAKAQIWDTAGQERYR 74
Query: 60 AVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAV 119
A+TSAYYRGA GA++VYDI RQSF +V+RWL EL + D N++I+L GNKSDL LR V
Sbjct: 75 AITSAYYRGARGAIVVYDIASRQSFQSVSRWLTELNEYGDANMVIVLAGNKSDLVNLREV 134
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEI 157
TEDA+ FA+ L F ETS L S NVE AF +L+ I
Sbjct: 135 STEDAERFAKANNLLFFETSCLNSDNVETAFTELLSAI 172
>gi|13537449|dbj|BAB40679.1| small GTPase Rab11C [Entamoeba histolytica]
Length = 212
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 97/177 (54%), Positives = 123/177 (69%), Gaps = 2/177 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IG+S VGKS LL RF R+EF + K TIGVEF T+T+ K ++AQIWDTAGQE+YRA
Sbjct: 13 IIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQIWDTAGQEKYRA 72
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T AYYRGA GAM VYD++K+ SFD + RW+ EL+ D +I IM+VGNK+DL+ R V
Sbjct: 73 ITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGRDSDITIMIVGNKADLKQEREVN 132
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGS 177
T D EFA+K F+ETSAL+ TNVE AF +L +IY+ K A ND S S
Sbjct: 133 TSDGTEFAQKHSAFFIETSALDGTNVEKAFSDLLIQIYK--KKNATLKNDSVPSDNS 187
>gi|449439127|ref|XP_004137339.1| PREDICTED: ras-related protein RABA6a-like [Cucumis sativus]
gi|449497494|ref|XP_004160418.1| PREDICTED: ras-related protein RABA6a-like [Cucumis sativus]
Length = 218
Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 100/206 (48%), Positives = 137/206 (66%), Gaps = 7/206 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
L GDS VGKS LL+RF+++EF DS+ TIGVEF + + + K VK QIWDTAGQER+RA
Sbjct: 17 LTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQIWDTAGQERFRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TS+YYRGA+GA+LVYDIT+ +FDN+ +WL ELR + ++I+LVGNK DL R V
Sbjct: 77 ITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGNKCDLHQSREVQ 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+A+ AE E L FMETSA ++ NVE AFL ++ I+ I S+K L + + E L
Sbjct: 137 EEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLHKKFE-----KL 191
Query: 181 LKATN--IVVPGQEPESGRRSYNCCT 204
+ N ++ E + + NCC+
Sbjct: 192 VAFPNGKEIISIHEVTPTKHNSNCCS 217
>gi|125546393|gb|EAY92532.1| hypothetical protein OsI_14270 [Oryza sativa Indica Group]
Length = 168
Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 90/125 (72%), Positives = 108/125 (86%)
Query: 40 IHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHAD 99
+ K VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+TK +F+NV RWL+ELR HAD
Sbjct: 7 VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHAD 66
Query: 100 KNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYR 159
NI++ML+GNK DL+ LR+V EDA FAE+EGL F+ETSAL++TNV+ AF TVLTEIYR
Sbjct: 67 SNIVVMLIGNKIDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIYR 126
Query: 160 IVSKK 164
I+SKK
Sbjct: 127 IISKK 131
>gi|156086346|ref|XP_001610582.1| ras-related protein Rab11A [Babesia bovis T2Bo]
gi|154797835|gb|EDO07014.1| ras-related protein Rab11A [Babesia bovis]
Length = 212
Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 97/158 (61%), Positives = 119/158 (75%), Gaps = 1/158 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNV-KAQIWDTAGQERYR 59
LIGDS VGKS LL RF + F LDSK+TIGVEF TKT+ +++ + KAQIWDTAGQERYR
Sbjct: 15 LIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKTVTLNNGKIAKAQIWDTAGQERYR 74
Query: 60 AVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAV 119
A+TSAYYRGA+GA++VYDI + SF NV++WL EL +AD NI I LVGNKSDL LR V
Sbjct: 75 AITSAYYRGAMGAIIVYDIACKTSFTNVSKWLTELHDYADSNITICLVGNKSDLTHLREV 134
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEI 157
ED + FA + L F ETS L S NV++AF +L++I
Sbjct: 135 NKEDGEAFARENDLLFFETSCLNSENVDVAFKELLSKI 172
>gi|407039687|gb|EKE39771.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 212
Score = 196 bits (497), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 91/159 (57%), Positives = 117/159 (73%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IG+S VGKS LL RF R+EF + K TIGVEF T+T+ K ++AQIWDTAGQE+YRA
Sbjct: 13 IIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQIWDTAGQEKYRA 72
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T AYYRGA GAM VYD++K+ SFD + RW+ EL+ D +I IM+VGNK+DL+ R V
Sbjct: 73 ITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGCDSDITIMIVGNKADLKQEREVN 132
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYR 159
T D EFA+K F+ETSAL+ TNVE AF +L +IY+
Sbjct: 133 TSDGTEFAQKHSAFFIETSALDGTNVEKAFSDLLIQIYK 171
>gi|46193751|emb|CAG25544.1| putative Ras-related GTP-binding protein [Cucumis sativus]
Length = 203
Score = 195 bits (496), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 100/206 (48%), Positives = 137/206 (66%), Gaps = 7/206 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
L GDS VGKS LL+RF+++EF DS+ TIGVEF + + + K VK QIWDTAGQER+RA
Sbjct: 2 LTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQIWDTAGQERFRA 61
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TS+YYRGA+GA+LVYDIT+ +FDN+ +WL ELR + ++I+LVGNK DL R V
Sbjct: 62 ITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGNKCDLHQSREVQ 121
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+A+ AE E L FMETSA ++ NVE AFL ++ I+ I S+K L + + E L
Sbjct: 122 EEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLHKKFE-----KL 176
Query: 181 LKATN--IVVPGQEPESGRRSYNCCT 204
+ N ++ E + + NCC+
Sbjct: 177 VAFPNGKEIISIHEVTPTKPNSNCCS 202
>gi|167384417|ref|XP_001736944.1| rab11 [Entamoeba dispar SAW760]
gi|165900524|gb|EDR26832.1| rab11, putative [Entamoeba dispar SAW760]
Length = 213
Score = 195 bits (496), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 89/157 (56%), Positives = 121/157 (77%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDS VGKS LL RF RDEF + K+TIGVEF +K + + + V+ QIWDTAGQERYRA
Sbjct: 14 MIGDSGVGKSNLLLRFTRDEFDPEKKSTIGVEFSSKQIRYNDETVRTQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T+AYYRGA+GA+LVYD+TK+ SF+++ RWL ELR +ADK ++ M+VGNK DLE +R V
Sbjct: 74 ITNAYYRGALGAILVYDVTKKSSFESLDRWLSELRDNADKKVVEMIVGNKCDLEQMREVT 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEI 157
++ ++ A+K G F ETSAL+ NVE AF+ ++ +I
Sbjct: 134 IKEGEDMAKKIGAFFFETSALDGKNVETAFMAIIQKI 170
>gi|67473696|ref|XP_652598.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56469466|gb|EAL47212.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790052|dbj|BAD82822.1| small GTPase EhRab11D [Entamoeba histolytica]
gi|407040023|gb|EKE39941.1| Rab family GTPase [Entamoeba nuttalli P19]
gi|449703380|gb|EMD43841.1| small GTPase EhRab11D, putative [Entamoeba histolytica KU27]
Length = 213
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 120/157 (76%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDS VGKS LL RF RDEF + K+TIGVEF +K + + + V+ QIWDTAGQERYRA
Sbjct: 14 MIGDSGVGKSNLLLRFTRDEFDPEKKSTIGVEFSSKQIRYNDETVRTQIWDTAGQERYRA 73
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T+AYYRGA+GA+LVYD+TK+ SF+++ RWL ELR +ADK ++ M+VGNK DLE +R V
Sbjct: 74 ITNAYYRGALGAILVYDVTKKSSFESLDRWLSELRDNADKKVVEMIVGNKCDLEQMREVS 133
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEI 157
++ ++ A+K G F ETSA + NVE AF+ ++ +I
Sbjct: 134 IKEGEDMAKKIGAFFFETSAFDGKNVETAFMAIIQKI 170
>gi|194744897|ref|XP_001954929.1| GF16497 [Drosophila ananassae]
gi|190627966|gb|EDV43490.1| GF16497 [Drosophila ananassae]
Length = 166
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/128 (71%), Positives = 108/128 (84%)
Query: 46 KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIM 105
KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI K +++NV RWL ELR HAD+NI+IM
Sbjct: 13 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIM 72
Query: 106 LVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKA 165
LVGNKSDL LR+VPT++AK FAE+ GL F+ETSAL+STNVE AF +LTEIYRIVS+K
Sbjct: 73 LVGNKSDLRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQ 132
Query: 166 LTANDESE 173
+ E +
Sbjct: 133 IRDPPEGD 140
>gi|145534648|ref|XP_001453068.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833730|emb|CAI39337.1| rab_C74 [Paramecium tetraurelia]
gi|124420768|emb|CAK85671.1| unnamed protein product [Paramecium tetraurelia]
Length = 213
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/166 (53%), Positives = 122/166 (73%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGK+ +L RF +EF L+SK TIGVEF TKT K+VK QIWDTAGQER+RA
Sbjct: 17 LIGDSGVGKTNILKRFINNEFQLESKPTIGVEFATKTFQQQGKSVKCQIWDTAGQERFRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T+AYYRGAVGA + YDIT+ +F N +WL EL+ HAD NI+I+++GNK D RAV
Sbjct: 77 ITNAYYRGAVGAFICYDITREITFKNTEKWLSELKEHADGNIVIIMIGNKIDAVDSRAVR 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL 166
T++A+++ E + + F+ETSAL+ TN+++AF ++ I+ + K +
Sbjct: 137 TDEAQDYCESQKIGFIETSALDGTNIDVAFNKIVANIFNTIGSKNI 182
>gi|403221558|dbj|BAM39691.1| small GTPase [Theileria orientalis strain Shintoku]
Length = 212
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 99/172 (57%), Positives = 120/172 (69%), Gaps = 1/172 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHH-KNVKAQIWDTAGQERYR 59
LIGDS VGKS LL RF + F LDSK+TIGVEF TK + + + K KAQIWDTAGQERYR
Sbjct: 15 LIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVTLKNGKTAKAQIWDTAGQERYR 74
Query: 60 AVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAV 119
A+TSAYYRGA GA++VYDI +QSF NV+RWL EL + D N+II LVGNKSDL LR V
Sbjct: 75 AITSAYYRGARGAIVVYDIASKQSFYNVSRWLTELNEYGDPNMIIALVGNKSDLTHLREV 134
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDE 171
+ED + +A L F ETS L + N++ AF +L+ I K TA+ E
Sbjct: 135 SSEDGERYAHSNNLMFFETSCLNNENIDTAFTELLSSICENHEKFGDTAHGE 186
>gi|351722452|ref|NP_001235197.1| uncharacterized protein LOC100306448 [Glycine max]
gi|255628567|gb|ACU14628.1| unknown [Glycine max]
Length = 147
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 88/130 (67%), Positives = 110/130 (84%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF ++EFSL+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVLKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYD+T+ +F+NV RWL+ELR H D NI++MLVGNK+DL LRAV
Sbjct: 78 ITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNKADLRHLRAVS 137
Query: 121 TEDAKEFAEK 130
TE+ FAE+
Sbjct: 138 TEETTNFAER 147
>gi|242097064|ref|XP_002439022.1| hypothetical protein SORBIDRAFT_10g030070 [Sorghum bicolor]
gi|241917245|gb|EER90389.1| hypothetical protein SORBIDRAFT_10g030070 [Sorghum bicolor]
Length = 209
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 109/210 (51%), Positives = 138/210 (65%), Gaps = 17/210 (8%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDSAVGK+QLL RF RDEF LDSK+TIG+EFQT+T+ I VKAQIWDTAG
Sbjct: 11 VIGDSAVGKTQLLGRFTRDEFFLDSKSTIGIEFQTRTVDIARHRVKAQIWDTAGAR---- 66
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
YYRGA+GAMLVYD+T R + ARW+ ELR HADK+I++MLVGNK+DL
Sbjct: 67 ---TYYRGALGAMLVYDVTSRHA----ARWVTELRAHADKSIVVMLVGNKADLAGAVRWR 119
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
FAE++GL F E SAL NVE AFLT+L EI+ VS+K L A + ++G + L
Sbjct: 120 QTRRPLFAEEQGLFFSEASALSGDNVERAFLTLLQEIHANVSRKRLEAAPDEDTGAADVL 179
Query: 181 -LKATNIVVPGQ----EPESGRRSYNC-CT 204
LK T + + + E + RR+ +C CT
Sbjct: 180 ALKGTKLSLADEISIMETSALRRASSCSCT 209
>gi|290998764|ref|XP_002681950.1| rab family small GTPase [Naegleria gruberi]
gi|284095576|gb|EFC49206.1| rab family small GTPase [Naegleria gruberi]
Length = 215
Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 89/165 (53%), Positives = 121/165 (73%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDS VGKS L+ RF +++F+ D+K TIGVEF K++ +K QIWDTAGQER+RA
Sbjct: 11 VIGDSGVGKSNLITRFTQNKFTKDTKPTIGVEFGAKSIEYDGVTIKGQIWDTAGQERFRA 70
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+++AYYRGA GA++VYDIT ++SFDN+ +W +E+ + I +LVGNK DL LR V
Sbjct: 71 ISAAYYRGANGALIVYDITNQESFDNLEKWFKEIENQGENGCINILVGNKCDLNHLRQVE 130
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKA 165
T + FAEK + FMETSAL+STNV+ AF T+L EIY+ S+K+
Sbjct: 131 TATGRAFAEKHNVSFMETSALDSTNVDEAFTTLLKEIYKTQSRKS 175
>gi|223941192|dbj|BAH23088.1| small GTP binding protein Rab11 [Babesia bigemina]
Length = 211
Score = 192 bits (488), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 95/158 (60%), Positives = 118/158 (74%), Gaps = 1/158 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNV-KAQIWDTAGQERYR 59
LIGDS VGKS LL RF + F LDSK+TIGVEF TK + +++ + KAQIWDTAGQERYR
Sbjct: 15 LIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVTLNNGKIAKAQIWDTAGQERYR 74
Query: 60 AVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAV 119
A+TSAYYRGA+GA++VYDI + SF +V++WL EL +AD NI I LVGNKSDL LR V
Sbjct: 75 AITSAYYRGAMGAIIVYDIACKASFSSVSKWLTELHDYADANITICLVGNKSDLTHLREV 134
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEI 157
ED + FA + L F ETS L S NV++AF +L++I
Sbjct: 135 AKEDGEAFANENDLIFFETSCLNSENVDVAFKELLSKI 172
>gi|75337332|sp|Q9SJZ5.1|RAA4E_ARATH RecName: Full=Putative Ras-related protein RABA4e; Short=AtRABA4e
gi|4544452|gb|AAD22360.1| putative GTP-binding protein [Arabidopsis thaliana]
Length = 176
Score = 192 bits (488), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 99/166 (59%), Positives = 118/166 (71%), Gaps = 25/166 (15%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
L GDSAVGKSQL ARF RDEFS+DSKATI FQ
Sbjct: 14 LNGDSAVGKSQLRARFTRDEFSMDSKATIRCRFQYSN----------------------- 50
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+ YY+GAVGAMLVYD+T R+SF+++ +WLEELR HADKNI+I+L+GNK+DLE R+VP
Sbjct: 51 --APYYKGAVGAMLVYDMTIRESFEHIPQWLEELRVHADKNIVIILIGNKTDLENQRSVP 108
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKAL 166
EDAKEFAEKEGL F+ETSAL STNVE +F T+LTEI+ V+KK L
Sbjct: 109 VEDAKEFAEKEGLFFLETSALNSTNVENSFNTLLTEIFNKVNKKNL 154
>gi|145540567|ref|XP_001455973.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834247|emb|CAI44494.1| rab_C46 [Paramecium tetraurelia]
gi|124423782|emb|CAK88576.1| unnamed protein product [Paramecium tetraurelia]
Length = 227
Score = 192 bits (488), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 139/214 (64%), Gaps = 15/214 (7%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
L+G +AVGKSQ+L RF +D+F+L S TIGVEF K L I +K ++ Q+WDTAGQE+YRA
Sbjct: 18 LLGSTAVGKSQILLRFTKDQFNLSSNTTIGVEFSAKVLEIDNKKIRVQVWDTAGQEKYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHAD-KNIIIMLVGNKSDLETLRAV 119
+ AYY+GAVGA LVYDITK+ SF V RWL+E+R ++D +N+++ML+GNK+DLE R V
Sbjct: 78 IAKAYYKGAVGAFLVYDITKKNSFLEVDRWLQEIRDYSDQQNLVLMLIGNKNDLEAQRQV 137
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSK----------KALTAN 169
E+A ++A+ + + F+ETSA N+E AF + EI R +S+ KA +
Sbjct: 138 SKEEAIKYAQSKKMGFLETSAQTGHNIEFAFKQIAEEILRDISETQDDDEFEQTKAQYSK 197
Query: 170 DESESGGSSSLLKATNIVVPGQEPESGRRSYNCC 203
++ ++ +S L A + V SG CC
Sbjct: 198 NKGQTSNASVLKAADHQVKKKNNNNSG----TCC 227
>gi|18266417|gb|AAL67568.1|AF461435_1 small GTP binding protein rab11 [Babesia gibsoni]
Length = 212
Score = 192 bits (487), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 96/158 (60%), Positives = 118/158 (74%), Gaps = 1/158 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNV-KAQIWDTAGQERYR 59
LIGDS VGKS LL RF + F LDSK+TIGVEF TK +V+++ + KAQIWDTAGQERYR
Sbjct: 15 LIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVVLNNGKIAKAQIWDTAGQERYR 74
Query: 60 AVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAV 119
A+TSAYYRGA+GA++VYDI + SF +V++WL EL +AD NI I LVGNKSDL LR V
Sbjct: 75 AITSAYYRGAMGAIVVYDIACKSSFVSVSKWLTELHDYADGNITICLVGNKSDLTHLREV 134
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEI 157
ED + FA + L F ETS L S NV++AF +L+ I
Sbjct: 135 AKEDGEAFANENDLIFFETSCLNSENVDVAFKELLSRI 172
>gi|413944912|gb|AFW77561.1| hypothetical protein ZEAMMB73_916842 [Zea mays]
Length = 162
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/122 (72%), Positives = 105/122 (86%)
Query: 43 KNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNI 102
K +KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDITKRQSFDNV RWL ELR HAD +I
Sbjct: 4 KTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSI 63
Query: 103 IIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVS 162
+IM+VGNKSDL LRA+ ++ K AEKEGL F+ETSA+E+ NVE AF T++TE+Y IV+
Sbjct: 64 VIMMVGNKSDLIHLRAISEDEGKALAEKEGLFFLETSAMEAINVEQAFQTIMTEVYGIVN 123
Query: 163 KK 164
+K
Sbjct: 124 RK 125
>gi|289740161|gb|ADD18828.1| GTPase Rab2 [Glossina morsitans morsitans]
Length = 213
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/203 (45%), Positives = 127/203 (62%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGD+ VGKS LL +F F TIGVEF + + I K +K QIWDTAGQE +R+
Sbjct: 11 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEAFRS 70
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T +YYRGA GA+LVYDIT+R +F+++ WLE+ R H++ N++IML+GNKSDLE+ R V
Sbjct: 71 ITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVK 130
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+ + FA + GL FMETSA + NVE AF+ EIY + + N+E+
Sbjct: 131 KEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGQQ 190
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
T +PG ++G S CC
Sbjct: 191 HSPTYPALPGTGSQAGSASSGCC 213
>gi|440291835|gb|ELP85077.1| rab11, putative [Entamoeba invadens IP1]
Length = 211
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 134/205 (65%), Gaps = 7/205 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
++GDS GK+ LL RF R+EF + K+TIGVEF +K + V+ QIWDTAGQERYRA
Sbjct: 12 MMGDSGAGKTCLLMRFTRNEFDAEKKSTIGVEFSSKQIQYKDSAVRIQIWDTAGQERYRA 71
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T AYYRG++GA++VYD+TK+ SF+ + RW EL + DK+++ M++GNK DLE +R V
Sbjct: 72 ITGAYYRGSLGAVMVYDVTKKSSFEALDRWHNELIENGDKSVVKMVIGNKCDLEQMREVT 131
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIY-RIVSKKALTANDESESGGSSS 179
TE+A+EFA+K G F ETSA++ TNVE AF+ ++ I R KKA A
Sbjct: 132 TEEAEEFAKKTGSYFFETSAMDGTNVEKAFMQMIETICDRQFEKKAAEAK-----PAQKP 186
Query: 180 LLKATNIVVPGQEP-ESGRRSYNCC 203
L+ ++ Q P E ++ + CC
Sbjct: 187 FLEERVVIEDPQVPQEPPKKKFQCC 211
>gi|195028532|ref|XP_001987130.1| GH21751 [Drosophila grimshawi]
gi|195383514|ref|XP_002050471.1| GJ22175 [Drosophila virilis]
gi|193903130|gb|EDW01997.1| GH21751 [Drosophila grimshawi]
gi|194145268|gb|EDW61664.1| GJ22175 [Drosophila virilis]
Length = 213
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 91/203 (44%), Positives = 127/203 (62%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGD+ VGKS LL +F F TIGVEF + + I K +K QIWDTAGQE +R+
Sbjct: 11 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEAFRS 70
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T +YYRGA GA+LVYDIT+R++F+++ WLE+ R H++ N++IML+GNKSDL++ R V
Sbjct: 71 ITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVK 130
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+ + FA + GL FMETSA + NVE AF+ EIY + + N+E+
Sbjct: 131 KEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGQQ 190
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
TN +PG G + CC
Sbjct: 191 ATPTNPALPGSGGAGGAVNSGCC 213
>gi|259089516|ref|NP_001158557.1| Ras-related protein Rab-11A [Oncorhynchus mykiss]
gi|225704820|gb|ACO08256.1| Ras-related protein Rab-11A [Oncorhynchus mykiss]
Length = 205
Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 87/128 (67%), Positives = 108/128 (84%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF R++F+L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSGVGKSNLLSRFTRNDFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA+LVYDI K +++NV RWL+ELR HAD NI+IM NKSDL LRAVP
Sbjct: 76 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMPADNKSDLRHLRAVP 135
Query: 121 TEDAKEFA 128
T++A+ FA
Sbjct: 136 TDEARAFA 143
>gi|196011940|ref|XP_002115833.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190581609|gb|EDV21685.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 210
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 95/206 (46%), Positives = 133/206 (64%), Gaps = 9/206 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGD+ VGKS LL +F F TIGVEF + + I K +K QIWDTAGQE +R+
Sbjct: 11 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRS 70
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T +YYRGA GA+LVYDIT+R++F+++ WLE+ R H++ N++IML+GNKSDLE+ R V
Sbjct: 71 ITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRRDVK 130
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESES---GGS 177
E+ + FA + GL FMETSA + NVE AF+ EIY+ + A N+E+ G
Sbjct: 131 KEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQKIQDGAFDINNEANGIKLGPQ 190
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCC 203
+ +T+ VP + P+SG CC
Sbjct: 191 NPSNPSTS--VPDRPPQSG----GCC 210
>gi|145533477|ref|XP_001452483.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420182|emb|CAK85086.1| unnamed protein product [Paramecium tetraurelia]
Length = 215
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 92/203 (45%), Positives = 131/203 (64%), Gaps = 2/203 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
++GDS VGK+ L+ RFA+ +F DSK T+GVEF + + I K +KAQ+WDTAGQE++RA
Sbjct: 15 IVGDSGVGKTNLVNRFAQQKFLDDSKPTVGVEFFFRHIDIMGKTIKAQVWDTAGQEKFRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T YYRGA+GAM+ YDITK QSF NV RW+EELR H D N+++ML+G KSDLE+ R V
Sbjct: 75 ITYGYYRGALGAMICYDITKEQSFLNVERWIEELREHGDSNLVMMLIGTKSDLESKRVVR 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
ED + A + + F+ETSAL++ NV AF +L +IY + + + +S
Sbjct: 135 NEDGTQKALQHNMAFLETSALKAANVGKAFSMLLEKIYVGIDNQGKEYQKRASIKLTSEP 194
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ N +P++ + CC
Sbjct: 195 ITIKN--AQNTKPDTTKSKKQCC 215
>gi|324529832|gb|ADY49047.1| Ras-related protein Rab-2, partial [Ascaris suum]
Length = 212
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/204 (46%), Positives = 128/204 (62%), Gaps = 3/204 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGD+ VGKS LL +F F TIGVEF + + I K +K QIWDTAGQE +R+
Sbjct: 11 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKQIKLQIWDTAGQESFRS 70
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T +YYRGA GA+LVYDIT+R +F+++ WLE+ R H++ N++IML+GNKSDLE R V
Sbjct: 71 ITRSYYRGAAGALLVYDITRRDTFNHLTSWLEDARQHSNSNMVIMLIGNKSDLEARREVK 130
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+ + FA + GL FMETSA + NVE AF+ EIYR + + N+E+
Sbjct: 131 KEEGEAFAREHGLIFMETSAKTAANVEEAFIDTAKEIYRKIQEGVFDINNEANGIKLGPQ 190
Query: 181 LKATNIVVPGQEPE-SGRRSYNCC 203
++ PG P SG S NCC
Sbjct: 191 HSPSSPNSPGGNPALSG--SSNCC 212
>gi|71034167|ref|XP_766725.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353682|gb|EAN34442.1| GTP-binding protein rab11, putative [Theileria parva]
gi|110825814|gb|ABH00983.1| small GTP-binding protein [Theileria parva]
Length = 212
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/158 (59%), Positives = 113/158 (71%), Gaps = 1/158 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNV-KAQIWDTAGQERYR 59
LIGDS VGKS LL RF + F LDSK+TIGVEF TK + + + V KAQIWDTAGQERYR
Sbjct: 15 LIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVNLRNGKVAKAQIWDTAGQERYR 74
Query: 60 AVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAV 119
A+TSAYYRGA GA++VYDI +QSF NV+RWL EL + D N+II LVGNKSDL LR V
Sbjct: 75 AITSAYYRGARGAIVVYDIASKQSFYNVSRWLSELNEYGDANMIIALVGNKSDLTHLREV 134
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEI 157
ED + +A+ L F ETS L + N++ F +L I
Sbjct: 135 TYEDGERYAKSNNLIFFETSCLSNENIDTTFTELLNLI 172
>gi|145501753|ref|XP_001436857.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834211|emb|CAI44483.1| rab_C72 [Paramecium tetraurelia]
gi|124404001|emb|CAK69460.1| unnamed protein product [Paramecium tetraurelia]
Length = 219
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 87/164 (53%), Positives = 121/164 (73%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGK+ +L RF ++EF LDSK TIGVEF TKT+ + +K+VK QIWDTAGQERYRA
Sbjct: 17 LIGDSGVGKTNILQRFVKNEFILDSKPTIGVEFSTKTINVENKSVKCQIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T+AYYRGAVGA + YDIT+ +F N+ +WL E++ +A KNI+IM++GNK D R V
Sbjct: 77 ITNAYYRGAVGAFVCYDITREITFTNIEKWLSEIKEYAPKNIVIMMIGNKIDQANDRMVR 136
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKK 164
+ +A + ++ + ++ETSA NVE AF +++EI+ +S K
Sbjct: 137 SVEAAKLCQQNKIGYIETSAQNGLNVEEAFSNLVSEIFSSMSSK 180
>gi|413950279|gb|AFW82928.1| ras protein Rab11C [Zea mays]
Length = 182
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/166 (56%), Positives = 123/166 (74%), Gaps = 3/166 (1%)
Query: 40 IHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHAD 99
+ K +KAQIWDTAGQERYRA+TSAYYRGA+GA+LVYD++K +F+N++RWL+ELR HAD
Sbjct: 20 VEGKIIKAQIWDTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHAD 79
Query: 100 KNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYR 159
N IMLVGNK+DL LRAV T+DA+ FAE EGL ++ETSALE+TNVE AF +L +IYR
Sbjct: 80 SNTRIMLVGNKTDLRHLRAVATDDARSFAEAEGLSYIETSALEATNVEEAFQLILGDIYR 139
Query: 160 IVSKKALTANDESESGGSSSLLKATNIVVPGQEPESGRRSYNCCTS 205
VSKK + A+DE +G T V G + + ++ CC++
Sbjct: 140 AVSKKPV-ASDEVGAGQGGVKEGKTIDVATGADAAAHKK--QCCSA 182
>gi|399217959|emb|CCF74846.1| unnamed protein product [Babesia microti strain RI]
Length = 213
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/172 (55%), Positives = 123/172 (71%), Gaps = 4/172 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNV-KAQIWDTAGQERYR 59
LIGDS VGKS LL R+ ++EF+L+SK+TIGVEF T ++ + V K QIWDTAGQERYR
Sbjct: 15 LIGDSNVGKSNLLTRYTKNEFNLESKSTIGVEFATNAHILKNGKVCKVQIWDTAGQERYR 74
Query: 60 AVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAV 119
A+TSAYYRGAVGA++ YDIT R SF+NV RWL+ELR +A + +I LVGNK D+ LR V
Sbjct: 75 AITSAYYRGAVGALICYDITSRSSFENVKRWLKELRDYAPPHSVICLVGNKVDMVNLRQV 134
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDE 171
++ + A E + F+E SAL+STNV AF ++ IY + +A T N E
Sbjct: 135 TKDEGAKLARLENILFLECSALDSTNVNAAFAELIETIY---TTQAKTTNYE 183
>gi|89258411|gb|ABD65429.1| Rab2 [Suberites domuncula]
Length = 214
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 126/204 (61%), Gaps = 1/204 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGD+ VGKS LL +F F TIGVEF + + I K +K QIWDTAGQE +R+
Sbjct: 11 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIEGKQIKLQIWDTAGQESFRS 70
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T +YYRGA GA+LVYDIT+R++FD++ WLE+ R H+ N++IML+GNKSDL+ R V
Sbjct: 71 ITRSYYRGAAGALLVYDITRRETFDHLTTWLEDARQHSSSNMVIMLIGNKSDLDAKREVK 130
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
+E+ FA++ GL FMETSA + NVE AF+ EIY + N+E+
Sbjct: 131 SEEGLAFAKEHGLVFMETSAKTAANVEEAFINTAKEIYTKIQDGVFDVNNEANGIKLGPQ 190
Query: 181 LKATNIVVPG-QEPESGRRSYNCC 203
+ V PG EP + S CC
Sbjct: 191 HQTGGTVRPGTTEPGKPQGSGGCC 214
>gi|72392927|ref|XP_847264.1| small GTP-binding protein Rab11 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|7939615|gb|AAF70820.1|AF152531_1 small GTPase Rab11 [Trypanosoma brucei]
gi|11611729|gb|AAG39034.1|AF234188_1 RAB11A GTPase [Trypanosoma brucei]
gi|62176098|gb|AAX70217.1| small GTP-binding protein Rab11 [Trypanosoma brucei]
gi|70803294|gb|AAZ13198.1| small GTP-binding protein Rab11 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 216
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 96/206 (46%), Positives = 130/206 (63%), Gaps = 4/206 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
++GDS VGKS L+ R+ DEFS D+ ATIGVEF TK++ I ++ K QIWDTAGQER+RA
Sbjct: 12 IVGDSGVGKSNLMTRYTADEFSQDTPATIGVEFMTKSIKIEGRDAKVQIWDTAGQERFRA 71
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
++ + Y GA GAMLVYDIT + SFD+++ WL+ELR I L+GNK DLE LR +
Sbjct: 72 ISRSIYHGAKGAMLVYDITNQTSFDSISTWLQELRAFVPATCSIFLIGNKCDLEHLRVIK 131
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIY-RIVSK--KALTANDESESGGS 177
E A FA + GL F+ETSALE TNV+ AF + +Y +V+ A T + G+
Sbjct: 132 KEVADRFARENGLSFLETSALEKTNVDKAFEWLAKSVYDHVVAPVDSAATGKRPPLNAGA 191
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCC 203
++ K N+ +G+ S CC
Sbjct: 192 AA-KKPVNLSPSNSNQPAGKASGGCC 216
>gi|224007553|ref|XP_002292736.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971598|gb|EED89932.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 195
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 93/171 (54%), Positives = 120/171 (70%), Gaps = 1/171 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGD+ VGKS LL +F F TIGVEF + + I K+VK QIWDTAGQE +R+
Sbjct: 11 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMIHIADKSVKLQIWDTAGQESFRS 70
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T +YYRGA GA+LVYDIT+R +F ++ RWLEE R H+ N++IML+GNK+DLE RAV
Sbjct: 71 ITRSYYRGAAGALLVYDITRRDTFKHLGRWLEEARQHSQSNMVIMLIGNKNDLEHRRAVS 130
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIY-RIVSKKALTAND 170
TE+ K FA+K GL FMETSA + NVE AF+ EI+ IVS K +N+
Sbjct: 131 TEEGKAFADKHGLIFMETSAKTAYNVEQAFINTAEEIHGNIVSGKIDVSNE 181
>gi|302764578|ref|XP_002965710.1| rab family GTPase [Selaginella moellendorffii]
gi|302779692|ref|XP_002971621.1| rab family GTPase [Selaginella moellendorffii]
gi|300160753|gb|EFJ27370.1| rab family GTPase [Selaginella moellendorffii]
gi|300166524|gb|EFJ33130.1| rab family GTPase [Selaginella moellendorffii]
Length = 210
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 137/205 (66%), Gaps = 6/205 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGD+ VGKS LL +F F TIGVEF + + I +K +K QIWDTAGQE +R+
Sbjct: 11 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRS 70
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T +YYRGA GA+LVYDIT+R++F+++A WLE+ R HA+ N+ IML+GNK+DL RAV
Sbjct: 71 ITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANSNMTIMLIGNKADLAHRRAVS 130
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+ ++FA++ GL FMETSA + NVE AF+ ++I++ + + ++E+ SG +
Sbjct: 131 TEEGEQFAKEHGLIFMETSAKTAQNVEEAFINTASKIHQKIEEGVFDVSNEA-SGIKIGV 189
Query: 181 LKATNIVVPGQEPE-SGRRSYNCCT 204
L PG + SG +S CC+
Sbjct: 190 LPNH----PGHRGDSSGPQSGGCCS 210
>gi|323445864|gb|EGB02268.1| hypothetical protein AURANDRAFT_35409 [Aureococcus anophagefferens]
Length = 210
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 94/207 (45%), Positives = 135/207 (65%), Gaps = 11/207 (5%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGD+ VGKS LL +F F + TIGVEF + + I + +K QIWDTAGQE +R+
Sbjct: 11 IIGDTGVGKSCLLLQFTDKRFQAIHELTIGVEFGARMVAIDERQIKLQIWDTAGQESFRS 70
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T +YYRGA GA+LVYDIT+R++F+++ RWLEE R +++ N+++ML+GNKSDL RAV
Sbjct: 71 ITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMVVMLIGNKSDLGHRRAVS 130
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDES---ESGGS 177
T++ +EFA K GL FMETSA S+NVE AF+ + I+ ++ +ES + G +
Sbjct: 131 TDEGEEFARKNGLVFMETSAKTSSNVERAFIDTASTIHENITAGVFDVTNESLGIKVGVA 190
Query: 178 SSLLKATNIVVPGQEPESGRRSY-NCC 203
SS L P +G ++ NCC
Sbjct: 191 SSEL-------PNSSSTAGSYAHKNCC 210
>gi|84997692|ref|XP_953567.1| small GTPase (Rab11 ) [Theileria annulata]
gi|65304564|emb|CAI72889.1| small GTPase (Rab11 homologue), putative [Theileria annulata]
Length = 207
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 93/158 (58%), Positives = 112/158 (70%), Gaps = 1/158 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNV-KAQIWDTAGQERYR 59
LIGDS VGKS LL RF + F LDSK+TIGVEF TK + + + + KAQIWDTAGQERYR
Sbjct: 14 LIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVNLKNGKIAKAQIWDTAGQERYR 73
Query: 60 AVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAV 119
A+TSAYYRGA GA++VYDI +QSF NV+RWL EL + D N+II LVGNKSDL LR V
Sbjct: 74 AITSAYYRGARGAIVVYDIASKQSFYNVSRWLSELNEYGDPNMIIALVGNKSDLTHLREV 133
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEI 157
ED + +A L F ETS L + N++ F +L I
Sbjct: 134 TFEDGERYARSNNLLFFETSCLNNENIDTTFGELLNLI 171
>gi|157107937|ref|XP_001650005.1| ras-related protein Rab-2A, putative [Aedes aegypti]
gi|170056253|ref|XP_001863947.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|108879444|gb|EAT43669.1| AAEL004902-PA [Aedes aegypti]
gi|167876016|gb|EDS39399.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 213
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 90/203 (44%), Positives = 126/203 (62%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGD+ VGKS LL +F F TIGVEF + + I K +K QIWDTAGQE +R+
Sbjct: 11 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEAFRS 70
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T +YYRGA GA+LVYDIT+R++F+++ WLE+ R H++ N++IML+GNKSDL++ R V
Sbjct: 71 ITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVK 130
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+ + FA + GL FMETSA + NVE AF+ EIY + + N+E+
Sbjct: 131 KEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGQQ 190
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
TN + G+ S CC
Sbjct: 191 HSPTNPSLGSGNNPGGQSSSGCC 213
>gi|430811332|emb|CCJ31255.1| unnamed protein product [Pneumocystis jirovecii]
Length = 144
Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 87/132 (65%), Positives = 109/132 (82%), Gaps = 1/132 (0%)
Query: 23 LDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQ 82
L+SK+TIGVEF T+++ + K +KAQIWDTAGQERYRA+TSAY GAVGA+LVYDI+K+
Sbjct: 12 LESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYV-GAVGALLVYDISKQT 70
Query: 83 SFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALE 142
+F+N+ RWL+ELR HAD NI+IMLVGNKSDL LRAV T+D K F+ GL F+ETSAL+
Sbjct: 71 TFENIQRWLKELRDHADSNIVIMLVGNKSDLRHLRAVSTDDGKNFSTTNGLSFIETSALD 130
Query: 143 STNVELAFLTVL 154
STNV+ AF +L
Sbjct: 131 STNVDCAFQDIL 142
>gi|391333703|ref|XP_003741250.1| PREDICTED: ras-related protein Rab-2A-like [Metaseiulus
occidentalis]
Length = 211
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 92/203 (45%), Positives = 125/203 (61%), Gaps = 2/203 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGD+ VGKS LL +F F TIGVEF + + I K +K QIWDTAGQE +R+
Sbjct: 11 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIEKKQIKLQIWDTAGQEAFRS 70
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T +YYRGA GA+LVYDIT+R +F+++ WLE+ R H++ N++IML+GNKSDLE R V
Sbjct: 71 ITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLEGRREVK 130
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+ + FA++ GL FMETSA + NVE AF+ EIY + N+E+ G
Sbjct: 131 KEEGEAFAQEHGLVFMETSAKTADNVEDAFINTAKEIYDKIQDGVFDINNEAN--GIKIG 188
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ N G P +S CC
Sbjct: 189 PQQANTSPGGGNPSGNTQSGGCC 211
>gi|297740535|emb|CBI30717.3| unnamed protein product [Vitis vinifera]
Length = 154
Score = 185 bits (470), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 85/122 (69%), Positives = 102/122 (83%)
Query: 25 SKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSF 84
SK+TIGVEF T++L + K +KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F
Sbjct: 17 SKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTF 76
Query: 85 DNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALEST 144
+NV RWL ELR H D NI++ML+GNKSDL L AV TED K FAE+E L FMETSALE+T
Sbjct: 77 ENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALEAT 136
Query: 145 NV 146
N+
Sbjct: 137 NL 138
>gi|326523363|dbj|BAJ88722.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 163
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/120 (71%), Positives = 101/120 (84%)
Query: 43 KNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNI 102
K +KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDITK+QSFDNV RWL ELR HAD +I
Sbjct: 5 KTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQSFDNVNRWLHELRDHADSSI 64
Query: 103 IIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVS 162
+IM+VGNKSDL LRAV + K AEKEGL F+ETSA+E+ NV AF T++TE+Y IV+
Sbjct: 65 VIMMVGNKSDLTHLRAVSEDQGKALAEKEGLFFLETSAMEAVNVVEAFQTIITEVYGIVN 124
>gi|323309207|gb|EGA62432.1| Ypt32p [Saccharomyces cerevisiae FostersO]
Length = 153
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 84/127 (66%), Positives = 107/127 (84%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL+RF DEF+++SK+TIGVEF T+T+ + +K +KAQIWDTAGQERYRA
Sbjct: 18 LIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGQERYRA 77
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGAVGA++VYDI+K S++N WL ELR +AD N+ + L+GNKSDL LRAVP
Sbjct: 78 ITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDLAHLRAVP 137
Query: 121 TEDAKEF 127
T++AK+F
Sbjct: 138 TDEAKKF 144
>gi|302846433|ref|XP_002954753.1| RabB/Rab2 [Volvox carteri f. nagariensis]
gi|549811|sp|P36863.1|YPTV4_VOLCA RecName: Full=GTP-binding protein yptV4; AltName: Full=RAB2 homolog
gi|409166|gb|AAA34253.1| GTP-binding protein [Volvox carteri]
gi|300259936|gb|EFJ44159.1| RabB/Rab2 [Volvox carteri f. nagariensis]
Length = 213
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 131/205 (63%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGD+ VGKS LL +F F TIGVEF + + I K +K QIWDTAGQE +R+
Sbjct: 11 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRS 70
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T +YYRGA GA+LVYDIT+R++F+++A WLE+ R HA+ N+ IML+GNK DL RAV
Sbjct: 71 ITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVT 130
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+ ++FA++ GL F+ETSA + NVE AF+ EIY+ + ++ES G
Sbjct: 131 TEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSNESY--GIKVG 188
Query: 181 LKATNIVVPGQEPESG--RRSYNCC 203
A N +P G R+S +CC
Sbjct: 189 YGAGNAGPQAAKPGEGDARKSSSCC 213
>gi|268567488|ref|XP_002647794.1| Hypothetical protein CBG23562 [Caenorhabditis briggsae]
Length = 153
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 83/137 (60%), Positives = 111/137 (81%), Gaps = 1/137 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
L+GDS VGKS LL+RF R+ F L++K+TIGVEF T++++I K +KA IWDTAGQERYRA
Sbjct: 17 LVGDSGVGKSNLLSRFTRNTFDLETKSTIGVEFATRSMMIEGKKIKATIWDTAGQERYRA 76
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADK-NIIIMLVGNKSDLETLRAV 119
+T AYYRGA+G ++VYDI K Q+F N+ +WL+ELR HAD+ NI IMLVGNK+DL LRAV
Sbjct: 77 ITPAYYRGALGILIVYDIAKHQTFQNIDQWLKELRNHADESNISIMLVGNKTDLRHLRAV 136
Query: 120 PTEDAKEFAEKEGLCFM 136
PT++A +A++ + F+
Sbjct: 137 PTQEAAIYADRNHMSFI 153
>gi|402587368|gb|EJW81303.1| hypothetical protein WUBG_07788 [Wuchereria bancrofti]
Length = 212
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 118/172 (68%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGD+ VGKS LL +F F TIGVEF + + I K +K QIWDTAGQE +R+
Sbjct: 11 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKQIKLQIWDTAGQESFRS 70
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T +YYRGA GA+LVYDIT+R +F+++A WLE+ R H++ N++IML+GNKSDLE R V
Sbjct: 71 ITRSYYRGAAGALLVYDITRRDTFNHLASWLEDARQHSNSNMVIMLIGNKSDLEARREVK 130
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDES 172
E+ + FA + GL FMETSA + NVE AF+ EIYR + + N+E+
Sbjct: 131 KEEGEAFAREHGLIFMETSAKTAANVEEAFIDTAKEIYRKIQEGVFDINNEA 182
>gi|393911454|gb|EFO26789.2| Ras-like protein Rab-2 [Loa loa]
Length = 212
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 118/172 (68%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGD+ VGKS LL +F F TIGVEF + + I K +K QIWDTAGQE +R+
Sbjct: 11 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKQIKLQIWDTAGQESFRS 70
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T +YYRGA GA+LVYDIT+R +F+++A WLE+ R H++ N++IML+GNKSDLE R V
Sbjct: 71 ITRSYYRGAAGALLVYDITRRDTFNHLASWLEDARQHSNSNMVIMLIGNKSDLEARREVK 130
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDES 172
E+ + FA + GL FMETSA + NVE AF+ EIYR + + N+E+
Sbjct: 131 KEEGEAFAREHGLIFMETSAKTAANVEEAFIDTAKEIYRKIQEGVFDINNEA 182
>gi|261330482|emb|CBH13466.1| Rab11A GTPase [Trypanosoma brucei gambiense DAL972]
Length = 216
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/206 (46%), Positives = 130/206 (63%), Gaps = 4/206 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
++GDS VGKS L+ R+ DEFS D+ ATIGVEF TK++ I ++ K QIWDTAGQER+RA
Sbjct: 12 IVGDSGVGKSNLMTRYTADEFSQDTPATIGVEFMTKSIKIEGRDAKVQIWDTAGQERFRA 71
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
++ + Y GA GAMLVYDIT + SFD+++ WL+ELR I L+G+K DLE LR +
Sbjct: 72 ISRSIYHGAKGAMLVYDITNQTSFDSISTWLQELRAFVPATCSIFLIGSKCDLEHLRVIK 131
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIY-RIVSK--KALTANDESESGGS 177
E A FA + GL F+ETSALE TNV+ AF + +Y +V+ A T + G+
Sbjct: 132 KEVADRFARENGLSFLETSALEKTNVDKAFEWLAKSVYDHVVAPVDSAATGKRPPLNAGA 191
Query: 178 SSLLKATNIVVPGQEPESGRRSYNCC 203
++ K N+ +G+ S CC
Sbjct: 192 AA-KKPVNLSPSNSNQPAGKASGGCC 216
>gi|66807211|ref|XP_637328.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|122086021|sp|Q54KM9.1|RB11B_DICDI RecName: Full=Ras-related protein Rab-11B
gi|2708641|gb|AAB92559.1| GTPase rab11b [Dictyostelium discoideum]
gi|60465730|gb|EAL63807.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 220
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 120/158 (75%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDS VGKS LL+R+ ++EFS+ +TIGVEF TKTL I +K +K Q+WDTAGQE+Y +
Sbjct: 16 VIGDSGVGKSNLLSRYNKNEFSVGKLSTIGVEFSTKTLKIDNKLIKLQLWDTAGQEKYNS 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T +YY+GA+GA++VY+I R SF+N+ +WL++ R +A ++ IMLVGNKSDL+ R V
Sbjct: 76 ITESYYKGAIGALIVYNIADRNSFNNLEKWLKKFRENAHQDYGIMLVGNKSDLKEYREVS 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIY 158
T + K+FAEK + F+ETSAL+S NVE AF + IY
Sbjct: 136 TLEGKQFAEKHYMQFIETSALDSNNVETAFNNLFNFIY 173
>gi|195120996|ref|XP_002005007.1| GI19298 [Drosophila mojavensis]
gi|193910075|gb|EDW08942.1| GI19298 [Drosophila mojavensis]
Length = 213
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/203 (44%), Positives = 127/203 (62%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGD+ VGKS LL +F F TIGVEF + + I K +K QIWDTAGQE +R+
Sbjct: 11 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEAFRS 70
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T +YYRGA GA+LVYDIT+R++F+++ WLE+ R H++ N++IML+GNKSDL++ R V
Sbjct: 71 ITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVK 130
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+ + FA + GL FMETSA + NVE AF+ EIY + + N+E+
Sbjct: 131 KEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGQQ 190
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
TN +PG G + CC
Sbjct: 191 ATPTNPALPGAGGAGGAVNSGCC 213
>gi|17137088|ref|NP_477090.1| Rab2, isoform A [Drosophila melanogaster]
gi|442622498|ref|NP_001260732.1| Rab2, isoform B [Drosophila melanogaster]
gi|194758098|ref|XP_001961299.1| GF11067 [Drosophila ananassae]
gi|194864038|ref|XP_001970739.1| GG23219 [Drosophila erecta]
gi|195474169|ref|XP_002089364.1| GE19072 [Drosophila yakuba]
gi|195580994|ref|XP_002080319.1| GD10420 [Drosophila simulans]
gi|2313035|dbj|BAA21706.1| rab2 [Drosophila melanogaster]
gi|21645117|gb|AAM70817.1| Rab2, isoform A [Drosophila melanogaster]
gi|27820101|gb|AAO25075.1| GH01619p [Drosophila melanogaster]
gi|190622597|gb|EDV38121.1| GF11067 [Drosophila ananassae]
gi|190662606|gb|EDV59798.1| GG23219 [Drosophila erecta]
gi|194175465|gb|EDW89076.1| GE19072 [Drosophila yakuba]
gi|194192328|gb|EDX05904.1| GD10420 [Drosophila simulans]
gi|220944512|gb|ACL84799.1| Rab2-PA [synthetic construct]
gi|220954388|gb|ACL89737.1| Rab2-PA [synthetic construct]
gi|440214116|gb|AGB93265.1| Rab2, isoform B [Drosophila melanogaster]
Length = 213
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/203 (44%), Positives = 128/203 (63%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGD+ VGKS LL +F F TIGVEF + + I K +K QIWDTAGQE +R+
Sbjct: 11 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEAFRS 70
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T +YYRGA GA+LVYDIT+R++F+++ WLE+ R H++ N++IML+GNKSDL++ R V
Sbjct: 71 ITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVK 130
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+ + FA + GL FMETSA + NVE AF+ EIY + + N+E+
Sbjct: 131 KEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGQQ 190
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
TN +PG +G + CC
Sbjct: 191 HSPTNPSLPGAGGAAGAANSGCC 213
>gi|6517192|dbj|BAA87878.1| Drab2 [Drosophila melanogaster]
Length = 213
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 91/203 (44%), Positives = 128/203 (63%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGD+ VGKS LL +F F TIGVEF + + I K +K QIWDTAGQE +R+
Sbjct: 11 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEAFRS 70
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T +YYRGA GA+LVYDIT+R++F+++ WLE+ R H++ N++IML+GNKSDL++ R V
Sbjct: 71 ITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVK 130
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+ + FA + GL FMETSA + NVE AF+ EIY + + N+E+
Sbjct: 131 KEEGEAFARENGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGQQ 190
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
TN +PG +G + CC
Sbjct: 191 HSPTNPSLPGAGGAAGAANSGCC 213
>gi|449443494|ref|XP_004139512.1| PREDICTED: ras-related protein RABB1c-like [Cucumis sativus]
Length = 211
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 94/209 (44%), Positives = 131/209 (62%), Gaps = 13/209 (6%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGD+ VGKS LL +F F TIGVEF + + I +K +K QIWDTAGQE +R+
Sbjct: 11 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRS 70
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T +YYRGA GA+LVYDIT+R++F+++A WLE+ R HA+ N+ IML+GNK DL RAV
Sbjct: 71 ITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVS 130
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+ ++FA++ GL FME SA + NVE AF+ IY+ + ++ES
Sbjct: 131 TEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNESYG------ 184
Query: 181 LKATNIVVPGQEPESGR-----RSYNCCT 204
+K +PG P GR +S CC+
Sbjct: 185 IKVGYGGIPG--PSGGRDGATAQSGGCCS 211
>gi|125806738|ref|XP_001360146.1| GA17076 [Drosophila pseudoobscura pseudoobscura]
gi|195149123|ref|XP_002015507.1| GL11116 [Drosophila persimilis]
gi|195455130|ref|XP_002074572.1| GK23088 [Drosophila willistoni]
gi|54635317|gb|EAL24720.1| GA17076 [Drosophila pseudoobscura pseudoobscura]
gi|194109354|gb|EDW31397.1| GL11116 [Drosophila persimilis]
gi|194170657|gb|EDW85558.1| GK23088 [Drosophila willistoni]
Length = 213
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 91/203 (44%), Positives = 128/203 (63%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGD+ VGKS LL +F F TIGVEF + + I K +K QIWDTAGQE +R+
Sbjct: 11 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEAFRS 70
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T +YYRGA GA+LVYDIT+R++F+++ WLE+ R H++ N++IML+GNKSDL++ R V
Sbjct: 71 ITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVK 130
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+ + FA + GL FMETSA + NVE AF+ EIY + + N+E+
Sbjct: 131 KEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGQQ 190
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
TN +PG +G + CC
Sbjct: 191 HSPTNPSLPGSGGAAGAANSGCC 213
>gi|91087587|ref|XP_971919.1| PREDICTED: similar to Rab-protein 2 CG3269-PA [Tribolium castaneum]
gi|270010699|gb|EFA07147.1| hypothetical protein TcasGA2_TC010138 [Tribolium castaneum]
Length = 213
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 91/203 (44%), Positives = 128/203 (63%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGD+ VGKS LL +F F TIGVEF + + I K +K QIWDTAGQE +R+
Sbjct: 11 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEAFRS 70
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T +YYRGA GA+LVYDIT+R++F+++ WL++ R H++ N++IML+GNKSDLE+ R V
Sbjct: 71 ITRSYYRGAAGALLVYDITRRETFNHLTTWLDDARQHSNSNMVIMLIGNKSDLESRREVK 130
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+ + FA + GL FMETSA + NVE AF+ EIY + + N+E+
Sbjct: 131 KEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQ 190
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
TN +PG G + +CC
Sbjct: 191 HSPTNPSLPGAGGAGGSQGSSCC 213
>gi|401416870|ref|XP_003872929.1| putative Rab11 GTPase [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322489155|emb|CBZ24407.1| putative Rab11 GTPase [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 208
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 94/204 (46%), Positives = 130/204 (63%), Gaps = 8/204 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS L+ R+ +EF+ ++ +TIGVEF TK++ I ++ K QIWDTAGQER+RA
Sbjct: 12 LIGDSGVGKSNLMTRYTTNEFNQETPSTIGVEFMTKSVKIQSRDAKIQIWDTAGQERFRA 71
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
++ + Y GA GAMLVYDIT + SFD++ WL+ELR I L+GNK DLE LR V
Sbjct: 72 ISRSIYHGAKGAMLVYDITNQTSFDSIPTWLQELRVFVPATCCIFLIGNKCDLEHLRVVK 131
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYR-IVSKKALTANDESESGGSSS 179
E A FA + GL F+ETSALE TNV+ AF + +Y +V+ + A+ + G +
Sbjct: 132 KEVADRFARENGLSFLETSALEKTNVDKAFEWLAKSVYEVVVTPQTREADRTAPKQGRTV 191
Query: 180 LLKATNIVVPGQEPESGRRSYNCC 203
+ P + PE+ ++S CC
Sbjct: 192 NMN------PSESPEA-KKSSGCC 208
>gi|313216504|emb|CBY37802.1| unnamed protein product [Oikopleura dioica]
gi|313232450|emb|CBY24118.1| unnamed protein product [Oikopleura dioica]
Length = 216
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 92/202 (45%), Positives = 130/202 (64%), Gaps = 3/202 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGD VGKS LL +F +F D TIGVE+ T+ + + + +K QIWDTAGQER+RA
Sbjct: 16 IIGDQGVGKSCLLHQFTEKKFMADCPHTIGVEYGTRIIEVAGQRIKLQIWDTAGQERFRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
VT +YYRG+ GA++VYDIT+RQ+F+++ WL + HA N +I L+GNKSDLE R VP
Sbjct: 76 VTRSYYRGSSGAIMVYDITRRQTFNHLEAWLTDATNHASPNTVIFLIGNKSDLEDQRDVP 135
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+A+EFA + GL F E SA NVE AFL +IY+ + + +L N + G +
Sbjct: 136 TEEAREFAREHGLHFCEASAKTGENVEDAFLETAKQIYQKIQEGSLELN--AADSGVQTR 193
Query: 181 LKATNIVVPGQEPESGRRSYNC 202
+ +N + EP++ + NC
Sbjct: 194 SQRSNQINSSDEPQTPQDK-NC 214
>gi|334314630|ref|XP_001379530.2| PREDICTED: ras-related protein Rab-2B-like [Monodelphis domestica]
Length = 272
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 119/172 (69%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGD+ VGKS LL +F F TIGVEF + + I K +K QIWDTAGQE +R+
Sbjct: 11 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRS 70
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T +YYRGA GA+LVYDIT+R++F+++ WLE+ R H+ N++IML+GNKSDLE+ R V
Sbjct: 71 ITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVK 130
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDES 172
E+ + FA + GL FMETSA ++NVE AF+ EIYR + + N+E+
Sbjct: 131 REEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYRKIQQGLFDVNNEA 182
>gi|2500074|sp|Q39570.1|YPTC4_CHLRE RecName: Full=GTP-binding protein YPTC4
gi|806722|gb|AAA82726.1| YptC4 [Chlamydomonas reinhardtii]
Length = 213
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 133/208 (63%), Gaps = 10/208 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGD+ VGKS LL +F F TIGVEF + + I K +K QIWDTAGQE +R+
Sbjct: 11 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRS 70
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T +YYRGA GA+LVYDIT+R++F+++A WLE+ R HA+ N+ IML+GNK DL RAV
Sbjct: 71 ITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVT 130
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESES-----G 175
TE+ ++FA++ GL F+ETSA + NVE AF+ EIY+ + ++ES G
Sbjct: 131 TEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSNESYGIKVGYG 190
Query: 176 GSSSLLKATNIVVPGQEPESGRRSYNCC 203
G ++ V PG+ + +S +CC
Sbjct: 191 GGNA---GPQTVKPGEGGAA--KSSSCC 213
>gi|255071629|ref|XP_002499489.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
gi|226514751|gb|ACO60747.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
Length = 204
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 136/204 (66%), Gaps = 13/204 (6%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL RFA D ++ +TIGV+F+ +T+ + K VK QIWDTAGQER+R
Sbjct: 13 LIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELEGKTVKLQIWDTAGQERFRT 72
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TS+YYRGA G ++VYD+T +SF+NV +WL E+ +A++N+ +LVGNKSDL RAV
Sbjct: 73 ITSSYYRGAHGIIVVYDVTDAESFNNVKQWLNEIDRYANENVNKLLVGNKSDLTAKRAVD 132
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEI-YRIVSKKALTANDESESGGSSS 179
E AK FA++ G+ F+ETSA +TNVE AF+T+ EI R+ S+ AL ++ G +
Sbjct: 133 YETAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKTRMASQPAL---NQGPKGAT-- 187
Query: 180 LLKATNIVVPGQEPESGRRSYNCC 203
V PG+ G+ + CC
Sbjct: 188 -------VRPGEGRPVGKANSQCC 204
>gi|146079278|ref|XP_001463744.1| putative small GTP-binding protein Rab11 [Leishmania infantum
JPCM5]
gi|398011473|ref|XP_003858932.1| small GTP-binding protein Rab11, putative [Leishmania donovani]
gi|134067831|emb|CAM66111.1| putative small GTP-binding protein Rab11 [Leishmania infantum
JPCM5]
gi|322497143|emb|CBZ32214.1| small GTP-binding protein Rab11, putative [Leishmania donovani]
Length = 208
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 130/204 (63%), Gaps = 8/204 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS L+ R+ +EF+ ++ +TIGVEF TK++ I ++ K QIWDTAGQER+RA
Sbjct: 12 LIGDSGVGKSNLMTRYTTNEFNQETPSTIGVEFMTKSVKIQSRDAKIQIWDTAGQERFRA 71
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
++ + Y GA GAMLVYDIT + SFD++ WL+ELR I L+GNK DLE LR V
Sbjct: 72 ISRSIYHGAKGAMLVYDITNQTSFDSIPTWLQELRVFVPATCCIFLIGNKCDLEHLRVVK 131
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYR-IVSKKALTANDESESGGSSS 179
E A FA + GL F+ETSALE TNV+ AF + +Y +V+ + A+ + G +
Sbjct: 132 KEAADRFARENGLSFLETSALERTNVDKAFEWLAKSVYEVVVTPQTREADRTAPKQGRTV 191
Query: 180 LLKATNIVVPGQEPESGRRSYNCC 203
+ P + PE+ +++ CC
Sbjct: 192 NMN------PSESPET-KKTSGCC 208
>gi|224089509|ref|XP_002308739.1| predicted protein [Populus trichocarpa]
gi|118487262|gb|ABK95459.1| unknown [Populus trichocarpa]
gi|222854715|gb|EEE92262.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 93/209 (44%), Positives = 131/209 (62%), Gaps = 13/209 (6%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGD+ VGKS LL +F F TIGVEF + + I +K +K QIWDTAGQE +R+
Sbjct: 11 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRS 70
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T +YYRGA GA+LVYDIT+R++F+++A WLE+ R HA+ N+ IML+GNK DL RAV
Sbjct: 71 ITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVS 130
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+ ++FA++ GL FME SA + NVE AF+ IY+ + ++ES
Sbjct: 131 TEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNESYG------ 184
Query: 181 LKATNIVVPGQEPESGR-----RSYNCCT 204
+K +PG P GR ++ CC+
Sbjct: 185 IKVGYGGIPG--PSGGRDGGSAQAGGCCS 211
>gi|395502994|ref|XP_003755858.1| PREDICTED: ras-related protein Rab-2B isoform 1 [Sarcophilus
harrisii]
Length = 216
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 119/172 (69%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGD+ VGKS LL +F F TIGVEF + + I K +K QIWDTAGQE +R+
Sbjct: 11 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRS 70
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T +YYRGA GA+LVYDIT+R++F+++ WLE+ R H+ N++IML+GNKSDLE+ R V
Sbjct: 71 ITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVK 130
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDES 172
E+ + FA + GL FMETSA ++NVE AF+ EIYR + + N+E+
Sbjct: 131 REEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYRKIQQGLFDVNNEA 182
>gi|118379577|ref|XP_001022954.1| Ras family protein [Tetrahymena thermophila]
gi|89304721|gb|EAS02709.1| Ras family protein [Tetrahymena thermophila SB210]
Length = 1307
Score = 182 bits (463), Expect = 5e-44, Method: Composition-based stats.
Identities = 89/158 (56%), Positives = 121/158 (76%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
L DS VGKS L++RF +D+FS++ + TIGVEF TKT+ I K +KAQIWDTAGQERYRA
Sbjct: 1104 LACDSGVGKSCLISRFTKDQFSMEQQPTIGVEFSTKTIKISDKIIKAQIWDTAGQERYRA 1163
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRGA GA++V+DITK+ SF+N+A+W +EL+ H+D I+ ML+GNK DL R +
Sbjct: 1164 ITSAYYRGAAGALIVFDITKQTSFENLAKWYKELQEHSDVQIVTMLIGNKCDLADQRNIS 1223
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIY 158
+ A +FA++ + ++ETSAL STNVE AF ++ IY
Sbjct: 1224 KDAASKFAQEYDMAYLETSALHSTNVEQAFHQIIKYIY 1261
>gi|71410719|ref|XP_807641.1| small GTP-binding protein Rab11 [Trypanosoma cruzi strain CL
Brener]
gi|70871685|gb|EAN85790.1| small GTP-binding protein Rab11, putative [Trypanosoma cruzi]
Length = 217
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 99/211 (46%), Positives = 125/211 (59%), Gaps = 13/211 (6%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDS VGKS L+ R+ +EFS D+ ATIGVEF TK++ I ++ K QIWDTAGQER+RA
Sbjct: 12 IIGDSGVGKSNLMTRYTANEFSQDTPATIGVEFMTKSIKIEGRDAKVQIWDTAGQERFRA 71
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
++ + Y GA GAMLVYDIT + SFD++ WL+ELR I L+GNK DLE LR V
Sbjct: 72 ISRSIYHGAKGAMLVYDITNQTSFDSIPTWLQELRVFVPATCSIFLIGNKCDLEHLRVVK 131
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E A FA + GL F+ETSALE TNVE AF + +Y +V A ++ G L
Sbjct: 132 KEVADRFARENGLSFLETSALEKTNVEKAFEWLAKSVYDLV-----VAPVDAAGGRRPPL 186
Query: 181 LKATNIVVP--------GQEPESGRRSYNCC 203
A N P GQ + CC
Sbjct: 187 NAAANAKRPVNLGASNDGQAAGKKENTSRCC 217
>gi|281202863|gb|EFA77065.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 202
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 134/203 (66%), Gaps = 13/203 (6%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL RFA D +S +TIGV+F+ +T+ ++ K +K QIWDTAGQER+R
Sbjct: 13 LIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWDTAGQERFRT 72
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TS+YYRGA G ++VYD+T R +FDNV +WL+E+ A +++ +LVGNKSDL + V
Sbjct: 73 ITSSYYRGAHGIIVVYDVTDRVTFDNVRQWLQEIDRFACESVNKLLVGNKSDLVAKKVVD 132
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
T AK FA+ G+ F+ETSA +STNVE AF+T+ TEI K LTA+ + + G +
Sbjct: 133 TNTAKSFADTLGIPFLETSAKQSTNVEQAFMTMATEI-----KNRLTASQPAPTTGGAK- 186
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
VVPG +S CC
Sbjct: 187 ------VVPGSSAPIQTKS-GCC 202
>gi|225447452|ref|XP_002263290.1| PREDICTED: ras-related protein RABB1c [Vitis vinifera]
gi|296085073|emb|CBI28488.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 93/209 (44%), Positives = 133/209 (63%), Gaps = 13/209 (6%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGD+ VGKS LL +F F TIGVEF + + I +K +K QIWDTAGQE +R+
Sbjct: 11 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRS 70
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T +YYRGA GA+LVYDIT+R++F+++A WLE+ R HA+ N+ IML+GNK DL RAV
Sbjct: 71 ITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVS 130
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+ + FA++ GL FME SA + NVE AF++ + IY+ + + ++ES
Sbjct: 131 TEEGELFAKEHGLIFMEASAKTAQNVEEAFISTASTIYKKIQEGVFDVSNESYG------ 184
Query: 181 LKATNIVVPGQEPESGR-----RSYNCCT 204
+K +PG P GR ++ CC+
Sbjct: 185 IKVGYGGIPG--PSGGRDGSSSQAGGCCS 211
>gi|71417072|ref|XP_810463.1| small GTP-binding protein Rab11 [Trypanosoma cruzi strain CL
Brener]
gi|70874996|gb|EAN88612.1| small GTP-binding protein Rab11, putative [Trypanosoma cruzi]
Length = 217
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 112/161 (69%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDS VGKS L+ R+ +EFS D+ ATIGVEF TK++ I ++ K QIWDTAGQER+RA
Sbjct: 12 IIGDSGVGKSNLMTRYTANEFSQDTPATIGVEFMTKSIKIEGRDAKVQIWDTAGQERFRA 71
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
++ + Y GA GAMLVYDIT + SFD++ WL+ELR I L+GNK DLE LR V
Sbjct: 72 ISRSIYHGAKGAMLVYDITNQTSFDSIPTWLQELRVFVPATCSIFLIGNKCDLEHLRVVK 131
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIV 161
E A FA + GL F+ETSALE TNVE AF + +Y +V
Sbjct: 132 KEVADRFARENGLSFLETSALEKTNVEKAFEWLAKSVYDLV 172
>gi|16755592|gb|AAL28022.1| small GTPase Rab2 [Nicotiana tabacum]
Length = 211
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 93/209 (44%), Positives = 131/209 (62%), Gaps = 13/209 (6%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGD+ VGKS LL +F F TIGVEF + + I +K +K QIWDTAGQE +R+
Sbjct: 11 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRS 70
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T +YYRGA GA+LVYDIT+R++F+++A WLE+ R HA+ N+ IML+GNK DL RAV
Sbjct: 71 ITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVS 130
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+ ++FA++ GL FME SA + NVE AF+ + IY+ + ++ES
Sbjct: 131 TEEGEQFAKENGLIFMEASAKTAQNVEEAFIRTASTIYKKIQDGVFDVSNESYG------ 184
Query: 181 LKATNIVVPGQEPESGR-----RSYNCCT 204
+K +PG P GR + CC+
Sbjct: 185 IKVGYGGIPG--PSGGRDGAASQGGGCCS 211
>gi|407867485|gb|EKG08588.1| small GTP-binding protein Rab11, putative,Rab11 GTPase, putative
[Trypanosoma cruzi]
Length = 217
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 112/161 (69%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGDS VGKS L+ R+ +EFS D+ ATIGVEF TK++ I ++ K QIWDTAGQER+RA
Sbjct: 12 IIGDSGVGKSNLMTRYTANEFSQDTPATIGVEFMTKSIKIEGRDAKVQIWDTAGQERFRA 71
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
++ + Y GA GAMLVYDIT + SFD++ WL+ELR I L+GNK DLE LR V
Sbjct: 72 ISRSIYHGAKGAMLVYDITNQTSFDSIPTWLQELRVFVPATCSIFLIGNKCDLEHLRVVK 131
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIV 161
E A FA + GL F+ETSALE TNVE AF + +Y +V
Sbjct: 132 KEVADRFARENGLSFLETSALEKTNVEKAFEWLAKSVYDLV 172
>gi|444317447|ref|XP_004179380.1| hypothetical protein TBLA_0C00450 [Tetrapisispora blattae CBS 6284]
gi|387512421|emb|CCH59861.1| hypothetical protein TBLA_0C00450 [Tetrapisispora blattae CBS 6284]
Length = 210
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 97/203 (47%), Positives = 138/203 (67%), Gaps = 5/203 (2%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIG+S VGKS LL RF+ D +S D +TIGV+F+ KT+ I K VK QIWDTAGQER+R
Sbjct: 13 LIGNSGVGKSCLLLRFSDDTYSNDYISTIGVDFKIKTIEIDGKTVKLQIWDTAGQERFRT 72
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TS+YYRG+ G ++VYD+T + SF++V WL+E+ +A +++ +LVGNKSDL+ R V
Sbjct: 73 ITSSYYRGSHGIIIVYDVTDQDSFNSVKMWLQEIDRYATSSVLKLLVGNKSDLKDKRIVE 132
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
+ AKEFAE + F+ETSAL+STNVE AFLT+ +I +S++ DE G +
Sbjct: 133 YDVAKEFAETNNMPFLETSALDSTNVEEAFLTMAKQIKESLSQQ---QKDERGGNGGNGG 189
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+ N+ + GQ ++ +S CC
Sbjct: 190 NGSDNVNLKGQSLKN--QSSGCC 210
>gi|74831376|emb|CAI39292.1| rab_C68 [Paramecium tetraurelia]
Length = 174
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 85/154 (55%), Positives = 114/154 (74%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
++GDS VGK+ L+ RFA+ +F DSK T+GVEF + + I K +KAQ+WDTAGQE++RA
Sbjct: 15 IVGDSGVGKTNLVNRFAQQKFLDDSKPTVGVEFFFRHIDIMGKTIKAQVWDTAGQEKFRA 74
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T YYRGA+GAM+ YDITK QSF NV RW+EELR H D N+++ML+G KSDLE+ R V
Sbjct: 75 ITYGYYRGALGAMICYDITKEQSFLNVERWIEELREHGDSNLVMMLIGTKSDLESKRVVR 134
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVL 154
ED + A + + F+ETSAL++ NV AF +L
Sbjct: 135 NEDGTQKALQHNMAFLETSALKAANVGKAFSMLL 168
>gi|146422886|ref|XP_001487377.1| GTP-binding protein YPTC1 [Meyerozyma guilliermondii ATCC 6260]
gi|146388498|gb|EDK36656.1| GTP-binding protein YPTC1 [Meyerozyma guilliermondii ATCC 6260]
Length = 207
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 138/203 (67%), Gaps = 8/203 (3%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS VGKS LL RFA D ++ D +TIGV+F+ +T+ + K +K QIWDTAGQER+R
Sbjct: 13 LIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRT 72
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TS+YYRGA G ++VYD+T ++SF+NV +WL+E+ +A ++ +LVGNK+DL + V
Sbjct: 73 ITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYATGGVMKLLVGNKADLSDKKIVE 132
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
AKEFA+ + F+ETSAL STNVE AF T+ +I K +T N S +GG+++
Sbjct: 133 YTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI-----KAQMTNNASSGAGGANA- 186
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
+N+ + GQ S +S +CC
Sbjct: 187 -SKSNVNLRGQSLTS-NQSNSCC 207
>gi|255647765|gb|ACU24343.1| unknown [Glycine max]
Length = 168
Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 89/167 (53%), Positives = 120/167 (71%), Gaps = 2/167 (1%)
Query: 40 IHHKNVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHAD 99
I+ K VKAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDI++RQ+FD++ RWL EL H+D
Sbjct: 3 INGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSD 62
Query: 100 KNIIIMLVGNKSDLETLRAVPTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYR 159
N++ +LVGNKSDL+ R V T + K AE +GL FMETSAL+S+NV AF TV+ EIY
Sbjct: 63 MNVVTILVGNKSDLKDAREVATAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYN 122
Query: 160 IVSKKALTANDESESGGSSSLLKATNIVVPGQ-EPESGRRSYNCCTS 205
I+S+K + + E + + +V+ G+ + E+ + CC+S
Sbjct: 123 ILSRKVMISQ-ELNKQDVTRIENGKTVVLQGEGDVEAAQSKKGCCSS 168
>gi|388495178|gb|AFK35655.1| unknown [Lotus japonicus]
Length = 211
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 94/209 (44%), Positives = 130/209 (62%), Gaps = 13/209 (6%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGD+ VGKS LL +F F TIGVEF + + I +K VK QIWDTAGQE +R+
Sbjct: 11 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPVKLQIWDTAGQESFRS 70
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T +YYRGA GA+LVYDIT+R++F+++A WLE+ R HA+ N+ IML+GNK DL RAV
Sbjct: 71 ITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVS 130
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
TE+ ++FA++ GL FME SA + NVE AF+ IY+ + ++ES
Sbjct: 131 TEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNESYG------ 184
Query: 181 LKATNIVVPGQEPESGR-----RSYNCCT 204
+K +PG P GR + CC+
Sbjct: 185 IKVGYGGIPG--PSGGRDGPSASAGGCCS 211
>gi|158294114|ref|XP_556035.3| AGAP005393-PA [Anopheles gambiae str. PEST]
gi|157015414|gb|EAL39812.3| AGAP005393-PA [Anopheles gambiae str. PEST]
Length = 213
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 89/203 (43%), Positives = 125/203 (61%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGD+ VGKS LL +F F TIGVEF + + I K +K QIWDTAGQE +R+
Sbjct: 11 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEAFRS 70
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T +YYRGA GA+LVYDIT+R++F+++ WLE+ R H++ N++IML+GNKSDL++ R V
Sbjct: 71 ITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVK 130
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESESGGSSSL 180
E+ + FA + GL FMETSA + NVE AF+ EIY + + N+E+
Sbjct: 131 KEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGQQ 190
Query: 181 LKATNIVVPGQEPESGRRSYNCC 203
T+ + G S CC
Sbjct: 191 HSPTSPSLGSGNSPGGPASSGCC 213
>gi|348577589|ref|XP_003474566.1| PREDICTED: ras-related protein Rab-2B-like isoform 2 [Cavia
porcellus]
Length = 216
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 93/209 (44%), Positives = 130/209 (62%), Gaps = 9/209 (4%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGD+ VGKS LL +F F TIGVEF + + I K +K QIWDTAGQE +R+
Sbjct: 11 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRS 70
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T +YYRGA GA+LVYDIT+R++F+++ WLE+ R H+ N++IML+GNKSDLE+ R V
Sbjct: 71 ITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVK 130
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESES---GGS 177
E+ + FA + GL FMETSA + NVE AF+ EIYR + + ++E+ G
Sbjct: 131 REEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHNEANGIKIGPQ 190
Query: 178 SSLLKATNIVVPGQEPESGRRS---YNCC 203
S+ + PG P + R + CC
Sbjct: 191 QSIATSAG---PGACPRNSRDTGSDSGCC 216
>gi|30525051|ref|NP_766189.1| ras-related protein Rab-2B [Mus musculus]
gi|28380119|sp|P59279.1|RAB2B_MOUSE RecName: Full=Ras-related protein Rab-2B
gi|26332531|dbj|BAC29983.1| unnamed protein product [Mus musculus]
gi|26336258|dbj|BAC31814.1| unnamed protein product [Mus musculus]
gi|28278529|gb|AAH46334.1| RAB2B, member RAS oncogene family [Mus musculus]
gi|74180601|dbj|BAE35753.1| unnamed protein product [Mus musculus]
gi|74227753|dbj|BAE35713.1| unnamed protein product [Mus musculus]
gi|112292941|dbj|BAF02848.1| Rab2B [Mus musculus]
gi|148710302|gb|EDL42248.1| RAB2B, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148710303|gb|EDL42249.1| RAB2B, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 216
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 93/211 (44%), Positives = 130/211 (61%), Gaps = 13/211 (6%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGD+ VGKS LL +F F TIGVEF + + I K +K QIWDTAGQE +R+
Sbjct: 11 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRS 70
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T +YYRGA GA+LVYDIT+R++F+++ WLE+ R H+ N++IML+GNKSDLE+ R V
Sbjct: 71 ITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVK 130
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESES---GGS 177
E+ + FA + GL FMETSA + NVE A++ EIYR + + ++E+ G
Sbjct: 131 REEGEAFAREHGLIFMETSAKTACNVEEAYINTAKEIYRKIQQGLFDVHNEANGIKIGPQ 190
Query: 178 SSLLKATNIVVPGQE-----PESGRRSYNCC 203
S+ + P Q P+SG CC
Sbjct: 191 QSITSSVGPCSPQQNVSDIGPDSG-----CC 216
>gi|313227810|emb|CBY22959.1| unnamed protein product [Oikopleura dioica]
Length = 215
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 87/164 (53%), Positives = 121/164 (73%), Gaps = 1/164 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
L+GD VGK+Q+ R+ DEF+ SK+TIGVEF KT+ I+ ++K QIWDT+G+ERYRA
Sbjct: 11 LVGDCGVGKTQIRNRYTLDEFNPQSKSTIGVEFAFKTVNINGNDIKGQIWDTSGEERYRA 70
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+TSAYYRG+VGA+LV+D+TK +SF+++ W +LR +AD+NI++ +VGNK DL T R V
Sbjct: 71 ITSAYYRGSVGAILVFDVTKPKSFESLENWASQLRQYADENIVVCVVGNKIDLPT-REVS 129
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKK 164
T +A+ FA G +METSAL+ T VE AF V +I+ IV +
Sbjct: 130 TVEAERFARGNGFFYMETSALDGTGVENAFRQVTKKIFEIVDSR 173
>gi|387592730|gb|EIJ87754.1| GTPase Ypt3 [Nematocida parisii ERTm3]
gi|387595356|gb|EIJ92980.1| GTPase Ypt3 [Nematocida parisii ERTm1]
Length = 206
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 121/160 (75%), Gaps = 1/160 (0%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
LIGDS+VGK+ LL R A + F+ ++K+TIGVEF TK V++ K +KAQIWDTAGQERYRA
Sbjct: 16 LIGDSSVGKTNLLERLAHNRFNTNTKSTIGVEFDTKCFVVNGKKIKAQIWDTAGQERYRA 75
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNV-ARWLEELRGHADKNIIIMLVGNKSDLETLRAV 119
+TSAYYRGAVGA++VYDIT+++SFDN W+++L+ +++ ++I LVGNK+DLE R V
Sbjct: 76 ITSAYYRGAVGAIVVYDITRKESFDNARTEWIKQLKDNSESGLVISLVGNKTDLEEKRQV 135
Query: 120 PTEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYR 159
++A+E A+ ETSAL NV+ AF ++ +IY+
Sbjct: 136 SQQEAREAAQIGDYLLTETSALSDVNVQEAFEALIKKIYQ 175
>gi|159473897|ref|XP_001695070.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158276449|gb|EDP02222.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 213
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 131/205 (63%), Gaps = 4/205 (1%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGD+ VGKS LL +F F TIGVEF + + I K +K QIWDTAGQE +R+
Sbjct: 11 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRS 70
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T +YYRGA GA+LVYDIT+R++F+++A WLE+ R HA+ N+ IML+GNK DL RAV
Sbjct: 71 ITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVT 130
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDESES--GGSS 178
TE+ ++FA++ GL F+ETSA + NVE AF+ EIY+ + ++ES G
Sbjct: 131 TEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSNESYGIKVGYG 190
Query: 179 SLLKATNIVVPGQEPESGRRSYNCC 203
+ V PG+ + +S +CC
Sbjct: 191 AGNAGPQTVKPGEGGAA--KSSSCC 213
>gi|268560844|ref|XP_002646304.1| C. briggsae CBR-UNC-108 protein [Caenorhabditis briggsae]
Length = 214
Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 117/172 (68%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGD+ VGKS LL +F F TIGVEF + + I K +K QIWDTAGQE +R+
Sbjct: 11 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQIWDTAGQESFRS 70
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T +YYRGA GA+LVYDIT+R +F+++ WLE+ R H++ N++IML+GNKSDLE R V
Sbjct: 71 ITRSYYRGAAGALLVYDITRRDTFNHLTSWLEDARQHSNSNMVIMLIGNKSDLEARREVK 130
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDES 172
E+ + FA + GL FMETSA + NVE AF+ EIYR + + N+E+
Sbjct: 131 REEGEAFAREHGLVFMETSAKTANNVEEAFIDTAKEIYRKIQEGVFDINNEA 182
>gi|399163139|gb|AFP33145.1| rab-2, partial [Caenorhabditis elegans]
Length = 213
Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 117/172 (68%)
Query: 1 LIGDSAVGKSQLLARFARDEFSLDSKATIGVEFQTKTLVIHHKNVKAQIWDTAGQERYRA 60
+IGD+ VGKS LL +F F TIGVEF + + I K +K QIWDTAGQE +R+
Sbjct: 10 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQIWDTAGQESFRS 69
Query: 61 VTSAYYRGAVGAMLVYDITKRQSFDNVARWLEELRGHADKNIIIMLVGNKSDLETLRAVP 120
+T +YYRGA GA+LVYDIT+R +F+++ WLE+ R H++ N++IML+GNKSDLE R V
Sbjct: 70 ITRSYYRGAAGALLVYDITRRDTFNHLTSWLEDARQHSNSNMVIMLIGNKSDLEARREVK 129
Query: 121 TEDAKEFAEKEGLCFMETSALESTNVELAFLTVLTEIYRIVSKKALTANDES 172
E+ + FA + GL FMETSA + NVE AF+ EIYR + + N+E+
Sbjct: 130 REEGEAFAREHGLVFMETSAKTAANVEEAFIDTAKEIYRKIQEGVFDINNEA 181
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.129 0.358
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,806,653,571
Number of Sequences: 23463169
Number of extensions: 98511554
Number of successful extensions: 366653
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 16937
Number of HSP's successfully gapped in prelim test: 7245
Number of HSP's that attempted gapping in prelim test: 332926
Number of HSP's gapped (non-prelim): 25013
length of query: 206
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 70
effective length of database: 9,168,204,383
effective search space: 641774306810
effective search space used: 641774306810
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 73 (32.7 bits)