BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>040837
MLVQCCTSLNSCALSSQRAFLSHNHNLDRFRNHPSRRTCKFTCLLHVGFEDIAQVVHNKV
LIAAGVSAAIGQLSKPVTGSLLYGKDFDLKAAFQAGGFPSTHSSCVVAAATGLALERGFS
DSFFGLTVVYAGLVMYDAQGVRREVGVHAKALNRHLAKAQVNSTVSKDRDNLIDGQEGAP
STSNMECLGSLLANETKSYASNSTNASPLLLRSSKKTRQTEEMVLPFGLADDVQEGSEKK
VDNSIMFKESIGHTEVEVVAGALLGFLVSLAVSAIM

High Scoring Gene Products

Symbol, full name Information P value
AT3G12685 protein from Arabidopsis thaliana 8.8e-55
BAS3352
Uncharacterized protein
protein from Bacillus anthracis 5.8e-20
BA_3613
conserved hypothetical protein
protein from Bacillus anthracis str. Ames 5.8e-20
LMOf2365_2359
Putative uncharacterized protein
protein from Listeria monocytogenes serotype 4b str. F2365 2.7e-18
AT1G67600 protein from Arabidopsis thaliana 6.1e-16
AT3G21610 protein from Arabidopsis thaliana 1.6e-15
AT3G61770 protein from Arabidopsis thaliana 2.8e-13

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  040837
        (276 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006336 - symbol:AT3G12685 "AT3G12685" speci...   466  8.8e-55   2
UNIPROTKB|Q81YD7 - symbol:BAS3352 "Uncharacterized protei...   184  5.8e-20   2
TIGR_CMR|BA_3613 - symbol:BA_3613 "conserved hypothetical...   184  5.8e-20   2
UNIPROTKB|Q71X40 - symbol:LMOf2365_2359 "Putative unchara...   179  2.7e-18   2
TAIR|locus:2008575 - symbol:AT1G67600 "AT1G67600" species...   160  6.1e-16   2
TAIR|locus:2089950 - symbol:AT3G21610 "AT3G21610" species...   154  1.6e-15   2
TAIR|locus:2076790 - symbol:AT3G61770 "AT3G61770" species...   162  2.8e-13   2


>TAIR|locus:505006336 [details] [associations]
            symbol:AT3G12685 "AT3G12685" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
            "plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0004601
            eggNOG:COG1963 HOGENOM:HOG000067103 InterPro:IPR003832 Pfam:PF02681
            EMBL:AY056158 EMBL:AY096441 IPI:IPI00524536 RefSeq:NP_566432.1
            UniGene:At.26370 STRING:Q93ZZ7 PRIDE:Q93ZZ7
            EnsemblPlants:AT3G12685.1 GeneID:820449 KEGG:ath:AT3G12685
            TAIR:At3g12685 InParanoid:Q93ZZ7 OMA:SKPFTSV PhylomeDB:Q93ZZ7
            ProtClustDB:CLSN2688315 ArrayExpress:Q93ZZ7 Genevestigator:Q93ZZ7
            Uniprot:Q93ZZ7
        Length = 213

 Score = 466 (169.1 bits), Expect = 8.8e-55, Sum P(2) = 8.8e-55
 Identities = 96/158 (60%), Positives = 118/158 (74%)

Query:    17 QRAFLSHNHN--LDRFRNHP-SRRTC-----KFTCLLHVGFEDIAQVVHNKVLIAAGVSA 68
             +  F+SHN N     F N   +  +C     + TC+++VGF+DIA+V+HNKVLIAAG SA
Sbjct:     4 KHCFVSHNANDLCFSFSNSKFNLASCPKKPPRLTCVVNVGFQDIAEVIHNKVLIAAGTSA 63

Query:    69 AIGQLSKPVTGSLLYGKDFDLKAAFQAGGFPSTHSSCVVAAATGLALERGFSDSFFGLTV 128
              IGQLSKP T  +LYGK+ D ++ FQAGGFPSTHSS VVAAAT +A ERGF+DS FGLTV
Sbjct:    64 VIGQLSKPFTSVVLYGKNLDFRSVFQAGGFPSTHSSSVVAAATAIAFERGFADSIFGLTV 123

Query:   129 VYAGLVMYDAQGVRREVGVHAKALNRHLAKAQVNSTVS 166
             VYAGL+MYDAQGVRREVG HAK LN+  A A+ +  +S
Sbjct:   124 VYAGLIMYDAQGVRREVGKHAKVLNKLTANARRSEVMS 161

 Score = 117 (46.2 bits), Expect = 8.8e-55, Sum P(2) = 8.8e-55
 Identities = 28/68 (41%), Positives = 42/68 (61%)

Query:   209 LLLRSSKKTRQTEEMVLPFGLADDVQEGSEKKVDNSIMFKESIGHTEVEVVAGALLGFLV 268
             +L + +   R++E M L    ++      E   + +   KESIGHTEVEV+AGAL GFLV
Sbjct:   146 VLNKLTANARRSEVMSLKGNESNKALTSEEISEEIAPPLKESIGHTEVEVIAGALFGFLV 205

Query:   269 SLAVSAIM 276
             +L+V ++M
Sbjct:   206 TLSVYSLM 213


>UNIPROTKB|Q81YD7 [details] [associations]
            symbol:BAS3352 "Uncharacterized protein" species:1392
            "Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:AE016879 EMBL:AE017334
            EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
            GenomeReviews:AE017334_GR HOGENOM:HOG000067103 InterPro:IPR003832
            Pfam:PF02681 KO:K09775 OMA:LGHTPVQ RefSeq:NP_845883.1
            RefSeq:YP_020248.2 RefSeq:YP_029609.1 DNASU:1083995
            EnsemblBacteria:EBBACT00000008879 EnsemblBacteria:EBBACT00000016652
            EnsemblBacteria:EBBACT00000020670 GeneID:1083995 GeneID:2815545
            GeneID:2848094 KEGG:ban:BA_3613 KEGG:bar:GBAA_3613 KEGG:bat:BAS3352
            ProtClustDB:CLSK917104 BioCyc:BANT260799:GJAJ-3414-MONOMER
            BioCyc:BANT261594:GJ7F-3523-MONOMER Uniprot:Q81YD7
        Length = 141

 Score = 184 (69.8 bits), Expect = 5.8e-20, Sum P(2) = 5.8e-20
 Identities = 40/99 (40%), Positives = 58/99 (58%)

Query:    55 VVHNKVLIAAGVSAAIGQLSKPVTGSLLYGKDFDLKAAFQAGGFPSTHSSCVVAAATGLA 114
             ++HN  L+AA +S  + Q +K V   L+   +FD    F +GG PS+H+S V A ATG+ 
Sbjct:     4 ILHNDPLMAAVISWFLAQFTK-VIFKLVKTGEFDFAKFFASGGMPSSHASTVTALATGVG 62

Query:   115 LERGFSDSFFGLTVVYAGLVMYDAQGVRREVGVHAKALN 153
             +  G   + F +  ++A +VMYDA GVR  V   AK LN
Sbjct:    63 VVEGVESTLFAIAAIFAIIVMYDASGVRLAVSKQAKILN 101

 Score = 67 (28.6 bits), Expect = 5.8e-20, Sum P(2) = 5.8e-20
 Identities = 13/22 (59%), Positives = 16/22 (72%)

Query:   249 ESIGHTEVEVVAGALLGFLVSL 270
             E +GHT  EVV GALLG +V +
Sbjct:   116 ELVGHTPYEVVVGALLGIIVGV 137


>TIGR_CMR|BA_3613 [details] [associations]
            symbol:BA_3613 "conserved hypothetical protein"
            species:198094 "Bacillus anthracis str. Ames" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
            HOGENOM:HOG000067103 InterPro:IPR003832 Pfam:PF02681 KO:K09775
            OMA:LGHTPVQ RefSeq:NP_845883.1 RefSeq:YP_020248.2
            RefSeq:YP_029609.1 DNASU:1083995 EnsemblBacteria:EBBACT00000008879
            EnsemblBacteria:EBBACT00000016652 EnsemblBacteria:EBBACT00000020670
            GeneID:1083995 GeneID:2815545 GeneID:2848094 KEGG:ban:BA_3613
            KEGG:bar:GBAA_3613 KEGG:bat:BAS3352 ProtClustDB:CLSK917104
            BioCyc:BANT260799:GJAJ-3414-MONOMER
            BioCyc:BANT261594:GJ7F-3523-MONOMER Uniprot:Q81YD7
        Length = 141

 Score = 184 (69.8 bits), Expect = 5.8e-20, Sum P(2) = 5.8e-20
 Identities = 40/99 (40%), Positives = 58/99 (58%)

Query:    55 VVHNKVLIAAGVSAAIGQLSKPVTGSLLYGKDFDLKAAFQAGGFPSTHSSCVVAAATGLA 114
             ++HN  L+AA +S  + Q +K V   L+   +FD    F +GG PS+H+S V A ATG+ 
Sbjct:     4 ILHNDPLMAAVISWFLAQFTK-VIFKLVKTGEFDFAKFFASGGMPSSHASTVTALATGVG 62

Query:   115 LERGFSDSFFGLTVVYAGLVMYDAQGVRREVGVHAKALN 153
             +  G   + F +  ++A +VMYDA GVR  V   AK LN
Sbjct:    63 VVEGVESTLFAIAAIFAIIVMYDASGVRLAVSKQAKILN 101

 Score = 67 (28.6 bits), Expect = 5.8e-20, Sum P(2) = 5.8e-20
 Identities = 13/22 (59%), Positives = 16/22 (72%)

Query:   249 ESIGHTEVEVVAGALLGFLVSL 270
             E +GHT  EVV GALLG +V +
Sbjct:   116 ELVGHTPYEVVVGALLGIIVGV 137


>UNIPROTKB|Q71X40 [details] [associations]
            symbol:LMOf2365_2359 "Putative uncharacterized protein"
            species:265669 "Listeria monocytogenes serotype 4b str. F2365"
            [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:AE017262 GenomeReviews:AE017262_GR eggNOG:COG1963
            HOGENOM:HOG000067103 InterPro:IPR003832 Pfam:PF02681 KO:K09775
            RefSeq:YP_014948.1 STRING:Q71X40 GeneID:2797602
            KEGG:lmf:LMOf2365_2359 PATRIC:20326082 OMA:LGHTPVQ
            ProtClustDB:CLSK873600 Uniprot:Q71X40
        Length = 157

 Score = 179 (68.1 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
 Identities = 40/97 (41%), Positives = 56/97 (57%)

Query:    58 NKVLIAAGVSAAIGQLSKPVTGSLLYGKDFDLKAAFQAGGFPSTHSSCVVAAATGLALER 117
             N  LIA+ ++    Q+ K     L+Y K F+L   F  GG PS+HS+ V A  T LA+E 
Sbjct:     6 NTPLIASIIAIVFAQVVKVPIHILVYRK-FNLGLMFSTGGMPSSHSAAVTALMTTLAIEY 64

Query:   118 GFSDSFFGLTVVYAGLVMYDAQGVRREVGVHAKALNR 154
             G    +F + VV+  +VM+DA GVRR+ G  A  LN+
Sbjct:    65 GLDSPYFAIAVVFGIIVMFDATGVRRQAGEQAVVLNK 101

 Score = 56 (24.8 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
 Identities = 17/49 (34%), Positives = 22/49 (44%)

Query:   228 GLADDVQEGSEKKVDNSIMFKESIGHTEVEVVAGALLGFLVSLAVSAIM 276
             GLA   QE   K +      KE +GH  +EV  GAL G  +   +   M
Sbjct:   115 GLAAPEQEEKTKHL------KELLGHKPMEVFFGALTGIAIGFILEMFM 157


>TAIR|locus:2008575 [details] [associations]
            symbol:AT1G67600 "AT1G67600" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0016036 "cellular response to phosphate
            starvation" evidence=RCA] [GO:0019375 "galactolipid biosynthetic
            process" evidence=RCA] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=RCA] EMBL:CP002684
            GO:GO:0004601 EMBL:AC008113 HOGENOM:HOG000067103 InterPro:IPR003832
            Pfam:PF02681 EMBL:AY086822 EMBL:BT024865 IPI:IPI00548895 PIR:E96699
            RefSeq:NP_176927.1 UniGene:At.35629 EnsemblPlants:AT1G67600.1
            GeneID:843081 KEGG:ath:AT1G67600 TAIR:At1g67600 InParanoid:Q9FXC5
            KO:K09775 OMA:SHYISIF PhylomeDB:Q9FXC5 ProtClustDB:CLSN2682001
            Genevestigator:Q9FXC5 Uniprot:Q9FXC5
        Length = 163

 Score = 160 (61.4 bits), Expect = 6.1e-16, Sum P(2) = 6.1e-16
 Identities = 39/97 (40%), Positives = 54/97 (55%)

Query:    58 NKVLIAAGVSAAIGQLSKPVTGSLLYGKDFDLKAAFQAGGFPSTHSSCVVAAATGLALER 117
             N  LI+A ++  I Q  K  T S    + +DLK    +GG PS+HS+ V A A  + L+ 
Sbjct:    18 NYPLISAVLAFTIAQFIKFFT-SWYKERRWDLKRLVGSGGMPSSHSATVTALALAVGLQE 76

Query:   118 GFSDSFFGLTVVYAGLVMYDAQGVRREVGVHAKALNR 154
             GF  S F + +V   +VMYDA GVR   G  A+ LN+
Sbjct:    77 GFGGSHFAIALVLTTIVMYDATGVRLHAGRQAEVLNQ 113

 Score = 57 (25.1 bits), Expect = 6.1e-16, Sum P(2) = 6.1e-16
 Identities = 12/25 (48%), Positives = 18/25 (72%)

Query:   248 KESIGHTEVEVVAGALLGFLVSLAV 272
             +E +GHT  +V+AG +LG  +S AV
Sbjct:   131 RELLGHTPPQVIAGGMLG--ISTAV 153


>TAIR|locus:2089950 [details] [associations]
            symbol:AT3G21610 "AT3G21610" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
            "plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0009507 "chloroplast" evidence=ISM] EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0004601 EMBL:AY128368 EMBL:BT000347
            IPI:IPI00547503 RefSeq:NP_188798.2 UniGene:At.38028 PRIDE:Q8L7M6
            EnsemblPlants:AT3G21610.1 GeneID:821715 KEGG:ath:AT3G21610
            TAIR:At3g21610 eggNOG:COG1963 HOGENOM:HOG000067103
            InParanoid:Q8L7M6 OMA:ACALAQF ProtClustDB:CLSN2680043
            ArrayExpress:Q8L7M6 Genevestigator:Q8L7M6 InterPro:IPR003832
            Pfam:PF02681 Uniprot:Q8L7M6
        Length = 174

 Score = 154 (59.3 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
 Identities = 37/98 (37%), Positives = 52/98 (53%)

Query:    57 HNKVLIAAGVSAAIGQLSKPVTGSLLYGKDFDLKAAFQAGGFPSTHSSCVVAAATGLALE 116
             HN  + +A ++ A+ Q  K  T +    K +D K    +GG PS+HS+ V A A  +  E
Sbjct:    32 HNLPIFSAFLAFALAQFLKVFT-NWYKEKRWDSKRMISSGGMPSSHSATVTALAVAIGFE 90

Query:   117 RGFSDSFFGLTVVYAGLVMYDAQGVRREVGVHAKALNR 154
              G     F + VV A +VMYDA GVR   G  A+ LN+
Sbjct:    91 EGAGAPAFAIAVVLACVVMYDASGVRLHAGRQAELLNQ 128

 Score = 60 (26.2 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
 Identities = 10/22 (45%), Positives = 17/22 (77%)

Query:   248 KESIGHTEVEVVAGALLGFLVS 269
             +E +GHT ++V AG +LG +V+
Sbjct:   146 RELLGHTPIQVAAGGILGCVVA 167


>TAIR|locus:2076790 [details] [associations]
            symbol:AT3G61770 "AT3G61770" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
            "plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0004601
            eggNOG:COG1963 InterPro:IPR003832 Pfam:PF02681 EMBL:AY080661
            EMBL:AY086903 EMBL:AY123039 IPI:IPI00521670 RefSeq:NP_567117.1
            UniGene:At.34231 EnsemblPlants:AT3G61770.1 GeneID:825350
            KEGG:ath:AT3G61770 TAIR:At3g61770 HOGENOM:HOG000241555
            InParanoid:Q8RXV2 OMA:HPISQRK PhylomeDB:Q8RXV2
            ProtClustDB:CLSN2689308 ArrayExpress:Q8RXV2 Genevestigator:Q8RXV2
            Uniprot:Q8RXV2
        Length = 284

 Score = 162 (62.1 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
 Identities = 37/102 (36%), Positives = 59/102 (57%)

Query:    52 IAQVVHNKVLIAAGVSAAIGQLSKPVTGSLLYGKDFDLKAAFQAGGFPSTHSSCVVAAAT 111
             +A +  N   ++A V+    Q SK V    +  K +D +  + +GG PS+HS+  +A  T
Sbjct:   134 VATLSANPTFVSAVVAWFFAQSSKMVINFFIERK-WDFRLLYASGGMPSSHSALCMALTT 192

Query:   112 GLALERGFSDSFFGLTVVYAGLVMYDAQGVRREVGVHAKALN 153
              +AL  G +DS F + + ++ +VMYDA GVRR  G+ A+ LN
Sbjct:   193 SVALCHGVADSLFPVCLGFSLIVMYDAIGVRRHAGMQAEVLN 234

 Score = 63 (27.2 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
 Identities = 11/22 (50%), Positives = 18/22 (81%)

Query:   248 KESIGHTEVEVVAGALLGFLVS 269
             KE +GHT  +V+AGAL+G +++
Sbjct:   252 KELLGHTPSQVLAGALVGIVIA 273


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.131   0.369    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      276       276   0.00079  115 3  11 22  0.49    33
                                                     33  0.41    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  578 (61 KB)
  Total size of DFA:  169 KB (2100 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  24.34u 0.13s 24.47t   Elapsed:  00:00:01
  Total cpu time:  24.34u 0.13s 24.47t   Elapsed:  00:00:01
  Start:  Sat May 11 14:44:18 2013   End:  Sat May 11 14:44:19 2013

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